Multiple sequence alignment - TraesCS3A01G222700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G222700 chr3A 100.000 5445 0 0 1 5445 416305617 416300173 0.000000e+00 10056.0
1 TraesCS3A01G222700 chr3A 75.718 1289 229 51 2283 3530 416191473 416190228 2.200000e-158 569.0
2 TraesCS3A01G222700 chr3A 84.358 179 10 10 1435 1610 416303975 416303812 5.650000e-35 159.0
3 TraesCS3A01G222700 chr3A 84.358 179 10 10 1643 1806 416304183 416304008 5.650000e-35 159.0
4 TraesCS3A01G222700 chr3A 79.358 218 45 0 4212 4429 416189507 416189290 2.630000e-33 154.0
5 TraesCS3A01G222700 chr3B 94.409 4597 152 28 570 5078 405787209 405791788 0.000000e+00 6968.0
6 TraesCS3A01G222700 chr3B 75.523 1291 227 51 2283 3530 405818050 405819294 7.970000e-153 551.0
7 TraesCS3A01G222700 chr3B 85.205 365 47 6 3575 3934 405819362 405819724 8.620000e-98 368.0
8 TraesCS3A01G222700 chr3B 86.545 275 30 4 91 364 405786947 405787215 4.120000e-76 296.0
9 TraesCS3A01G222700 chr3B 79.817 218 44 0 4212 4429 405826027 405826244 5.650000e-35 159.0
10 TraesCS3A01G222700 chr3B 84.393 173 9 7 1643 1800 405788101 405788270 2.630000e-33 154.0
11 TraesCS3A01G222700 chr3B 88.372 86 10 0 2669 2754 71453762 71453677 2.680000e-18 104.0
12 TraesCS3A01G222700 chr3D 96.955 2496 71 4 2026 4519 313785554 313783062 0.000000e+00 4183.0
13 TraesCS3A01G222700 chr3D 91.612 1979 88 29 88 2029 313794649 313792712 0.000000e+00 2663.0
14 TraesCS3A01G222700 chr3D 92.857 364 25 1 5075 5437 378796994 378796631 1.340000e-145 527.0
15 TraesCS3A01G222700 chr3D 91.736 363 30 0 5075 5437 198923578 198923216 6.290000e-139 505.0
16 TraesCS3A01G222700 chr3D 74.767 1288 242 50 2283 3530 313718227 313716983 8.140000e-138 501.0
17 TraesCS3A01G222700 chr3D 84.241 514 74 6 3575 4083 313716915 313716404 1.360000e-135 494.0
18 TraesCS3A01G222700 chr3D 93.701 254 14 2 4676 4927 313782901 313782648 3.980000e-101 379.0
19 TraesCS3A01G222700 chr3D 94.702 151 7 1 4508 4657 313783037 313782887 3.280000e-57 233.0
20 TraesCS3A01G222700 chr3D 88.268 179 15 4 1435 1610 313793110 313792935 5.530000e-50 209.0
21 TraesCS3A01G222700 chr3D 84.916 179 10 9 1643 1806 313793319 313793143 1.210000e-36 165.0
22 TraesCS3A01G222700 chr3D 80.392 204 40 0 4212 4415 313716261 313716058 7.300000e-34 156.0
23 TraesCS3A01G222700 chr3D 97.222 36 1 0 1 36 313796672 313796637 1.640000e-05 62.1
24 TraesCS3A01G222700 chr7D 93.056 360 24 1 5075 5434 137896864 137897222 4.830000e-145 525.0
25 TraesCS3A01G222700 chr7D 92.011 363 28 1 5075 5437 295333500 295333139 4.870000e-140 508.0
26 TraesCS3A01G222700 chr7D 95.050 101 5 0 129 229 614538234 614538334 5.650000e-35 159.0
27 TraesCS3A01G222700 chr7D 90.476 84 8 0 2671 2754 511058960 511059043 1.600000e-20 111.0
28 TraesCS3A01G222700 chr7D 89.535 86 9 0 2669 2754 580126180 580126095 5.770000e-20 110.0
29 TraesCS3A01G222700 chr5D 92.201 359 28 0 5075 5433 82937822 82938180 4.870000e-140 508.0
30 TraesCS3A01G222700 chr5D 91.304 368 29 3 5067 5434 191220153 191220517 2.930000e-137 499.0
31 TraesCS3A01G222700 chr1D 92.201 359 27 1 5075 5433 313889801 313890158 1.750000e-139 507.0
32 TraesCS3A01G222700 chr6D 91.944 360 29 0 5075 5434 174336271 174336630 6.290000e-139 505.0
33 TraesCS3A01G222700 chr6D 96.939 98 3 0 139 236 444300242 444300339 1.210000e-36 165.0
34 TraesCS3A01G222700 chr6A 91.281 367 32 0 5075 5441 430587296 430587662 8.140000e-138 501.0
35 TraesCS3A01G222700 chr7A 97.552 286 7 0 3420 3705 646119944 646119659 1.760000e-134 490.0
36 TraesCS3A01G222700 chr7A 96.503 286 10 0 3420 3705 470752773 470753058 1.780000e-129 473.0
37 TraesCS3A01G222700 chr5B 97.203 286 8 0 3420 3705 655601172 655600887 8.200000e-133 484.0
38 TraesCS3A01G222700 chr5B 96.250 80 3 0 4284 4363 40805587 40805508 1.230000e-26 132.0
39 TraesCS3A01G222700 chr7B 96.853 286 9 0 3420 3705 745420209 745419924 3.820000e-131 479.0
40 TraesCS3A01G222700 chr7B 96.503 286 10 0 3420 3705 377732370 377732655 1.780000e-129 473.0
41 TraesCS3A01G222700 chr7B 96.154 286 11 0 3420 3705 676753550 676753265 8.260000e-128 468.0
42 TraesCS3A01G222700 chr7B 97.500 80 2 0 4284 4363 377733250 377733329 2.650000e-28 137.0
43 TraesCS3A01G222700 chr4A 96.466 283 10 0 3423 3705 674219180 674218898 8.260000e-128 468.0
44 TraesCS3A01G222700 chr2D 97.917 96 2 0 133 228 117851307 117851212 3.370000e-37 167.0
45 TraesCS3A01G222700 chr2D 95.098 102 3 2 136 236 116619069 116618969 5.650000e-35 159.0
46 TraesCS3A01G222700 chr2A 98.913 92 1 0 137 228 119098679 119098588 1.210000e-36 165.0
47 TraesCS3A01G222700 chr2B 96.907 97 2 1 133 228 168635759 168635663 1.570000e-35 161.0
48 TraesCS3A01G222700 chr1A 94.175 103 4 2 135 236 47588475 47588374 7.300000e-34 156.0
49 TraesCS3A01G222700 chr6B 90.698 86 8 0 2669 2754 182640366 182640281 1.240000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G222700 chr3A 416300173 416305617 5444 True 3458.000000 10056 89.572000 1 5445 3 chr3A.!!$R2 5444
1 TraesCS3A01G222700 chr3A 416189290 416191473 2183 True 361.500000 569 77.538000 2283 4429 2 chr3A.!!$R1 2146
2 TraesCS3A01G222700 chr3B 405786947 405791788 4841 False 2472.666667 6968 88.449000 91 5078 3 chr3B.!!$F2 4987
3 TraesCS3A01G222700 chr3B 405818050 405819724 1674 False 459.500000 551 80.364000 2283 3934 2 chr3B.!!$F3 1651
4 TraesCS3A01G222700 chr3D 313782648 313785554 2906 True 1598.333333 4183 95.119333 2026 4927 3 chr3D.!!$R4 2901
5 TraesCS3A01G222700 chr3D 313792712 313796672 3960 True 774.775000 2663 90.504500 1 2029 4 chr3D.!!$R5 2028
6 TraesCS3A01G222700 chr3D 313716058 313718227 2169 True 383.666667 501 79.800000 2283 4415 3 chr3D.!!$R3 2132
7 TraesCS3A01G222700 chr7B 377732370 377733329 959 False 305.000000 473 97.001500 3420 4363 2 chr7B.!!$F1 943

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
531 2473 0.093026 CGAAAGATCGTGCCGTGAAC 59.907 55.0 0.00 0.00 44.06 3.18 F
573 2515 0.179156 GCTTGTTGGTGGCATCGATG 60.179 55.0 21.27 21.27 0.00 3.84 F
1316 3308 0.391130 TTGGACGCGGAGAAGATTGG 60.391 55.0 12.47 0.00 0.00 3.16 F
1916 3936 1.606885 ATCATTTGGTTGGGCCGCTG 61.607 55.0 0.00 0.00 41.21 5.18 F
3086 5115 0.037232 AAGCTGACCGCCTACTTGAC 60.037 55.0 0.00 0.00 40.39 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1894 3914 1.468985 CGGCCCAACCAAATGATACA 58.531 50.0 0.00 0.00 39.03 2.29 R
2215 4235 1.878953 TCTCGACTTTCAGGCAAACC 58.121 50.0 0.00 0.00 0.00 3.27 R
2585 4605 5.351465 AGTTCAGTAAATGCTAACACCATCG 59.649 40.0 0.00 0.00 0.00 3.84 R
3766 5890 0.038166 AATCAACACCACGGGCAGAT 59.962 50.0 0.00 0.00 0.00 2.90 R
4608 7126 0.035152 TACAGTGGCCATGCTGGAAG 60.035 55.0 23.26 3.19 40.96 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 8.385898 TCCTTCGTAAACAAAATGTAAGATGT 57.614 30.769 0.00 0.00 0.00 3.06
48 49 9.458374 CCTTCGTAAACAAAATGTAAGATGTTT 57.542 29.630 7.72 7.72 45.18 2.83
69 208 8.948631 TGTTTTAGATCACTAGAGCAATTAGG 57.051 34.615 0.00 0.00 30.99 2.69
70 209 8.758829 TGTTTTAGATCACTAGAGCAATTAGGA 58.241 33.333 0.00 0.00 30.99 2.94
71 210 9.601217 GTTTTAGATCACTAGAGCAATTAGGAA 57.399 33.333 0.00 0.00 30.99 3.36
75 214 8.900983 AGATCACTAGAGCAATTAGGAATTTC 57.099 34.615 0.00 0.00 30.99 2.17
77 216 9.988815 GATCACTAGAGCAATTAGGAATTTCTA 57.011 33.333 0.00 0.00 0.00 2.10
78 217 9.771534 ATCACTAGAGCAATTAGGAATTTCTAC 57.228 33.333 0.00 0.00 0.00 2.59
79 218 7.921214 TCACTAGAGCAATTAGGAATTTCTACG 59.079 37.037 0.00 0.00 0.00 3.51
80 219 7.921214 CACTAGAGCAATTAGGAATTTCTACGA 59.079 37.037 0.00 0.00 0.00 3.43
84 550 7.770897 AGAGCAATTAGGAATTTCTACGAATGT 59.229 33.333 0.00 0.00 0.00 2.71
86 552 7.336931 AGCAATTAGGAATTTCTACGAATGTGT 59.663 33.333 0.00 0.00 0.00 3.72
111 577 9.886132 GTCCTAATAAATACTTTCCAGAACAGA 57.114 33.333 0.00 0.00 0.00 3.41
238 2171 2.688507 CCATCCGATCTTTGATACCCG 58.311 52.381 0.00 0.00 0.00 5.28
269 2202 5.251764 GGATTGTCCCTCATATCAGAATGG 58.748 45.833 0.00 0.00 36.16 3.16
289 2222 2.519013 GAATTCCTGACCAAGCCACTT 58.481 47.619 0.00 0.00 0.00 3.16
290 2223 3.561313 GGAATTCCTGACCAAGCCACTTA 60.561 47.826 17.73 0.00 0.00 2.24
291 2224 4.273318 GAATTCCTGACCAAGCCACTTAT 58.727 43.478 0.00 0.00 0.00 1.73
292 2225 2.787473 TCCTGACCAAGCCACTTATG 57.213 50.000 0.00 0.00 0.00 1.90
301 2238 5.783111 ACCAAGCCACTTATGTTTTTCATC 58.217 37.500 0.00 0.00 37.91 2.92
302 2239 5.304101 ACCAAGCCACTTATGTTTTTCATCA 59.696 36.000 0.00 0.00 37.91 3.07
304 2241 6.875195 CCAAGCCACTTATGTTTTTCATCAAT 59.125 34.615 0.00 0.00 37.91 2.57
339 2276 1.402787 ACAAAAGCAAGGTGACCAGG 58.597 50.000 3.63 0.00 0.00 4.45
358 2295 1.609841 GGTGTTTTACCCTCGGACCAG 60.610 57.143 0.00 0.00 44.15 4.00
362 2299 3.117963 TGTTTTACCCTCGGACCAGAAAA 60.118 43.478 0.00 0.00 0.00 2.29
407 2344 0.252513 TGTCCCTCTTCCCATCCGAA 60.253 55.000 0.00 0.00 0.00 4.30
413 2350 2.171448 CCTCTTCCCATCCGAATGAAGT 59.829 50.000 0.00 0.00 34.61 3.01
420 2357 4.040461 TCCCATCCGAATGAAGTTCTATCC 59.960 45.833 4.17 0.00 34.61 2.59
435 2372 1.054406 TATCCACCCACCTGGCTAGC 61.054 60.000 6.04 6.04 37.83 3.42
436 2373 2.847292 ATCCACCCACCTGGCTAGCT 62.847 60.000 15.72 0.00 37.83 3.32
437 2374 1.689233 CCACCCACCTGGCTAGCTA 60.689 63.158 15.72 7.83 37.83 3.32
438 2375 1.522569 CACCCACCTGGCTAGCTAC 59.477 63.158 15.72 0.00 37.83 3.58
484 2426 3.060272 GTGAGGATTTCACGTATCGCATG 60.060 47.826 0.00 0.00 46.13 4.06
529 2471 4.162640 CGAAAGATCGTGCCGTGA 57.837 55.556 0.00 0.00 44.06 4.35
530 2472 2.441023 CGAAAGATCGTGCCGTGAA 58.559 52.632 0.00 0.00 44.06 3.18
531 2473 0.093026 CGAAAGATCGTGCCGTGAAC 59.907 55.000 0.00 0.00 44.06 3.18
554 2496 2.418976 GTGATGGATGATGATGATGCCG 59.581 50.000 0.00 0.00 0.00 5.69
573 2515 0.179156 GCTTGTTGGTGGCATCGATG 60.179 55.000 21.27 21.27 0.00 3.84
1162 3151 3.973267 GACGTCGTCAGCCAGCTCC 62.973 68.421 20.28 0.00 32.09 4.70
1218 3207 3.068691 CAGCGGAGGGTCTCGGAA 61.069 66.667 6.66 0.00 33.52 4.30
1222 3211 2.683933 GGAGGGTCTCGGAAGGCA 60.684 66.667 0.00 0.00 0.00 4.75
1315 3307 1.656652 ATTGGACGCGGAGAAGATTG 58.343 50.000 12.47 0.00 0.00 2.67
1316 3308 0.391130 TTGGACGCGGAGAAGATTGG 60.391 55.000 12.47 0.00 0.00 3.16
1317 3309 2.174319 GGACGCGGAGAAGATTGGC 61.174 63.158 12.47 0.00 0.00 4.52
1319 3311 3.264897 CGCGGAGAAGATTGGCGG 61.265 66.667 0.00 0.00 42.86 6.13
1320 3312 3.577313 GCGGAGAAGATTGGCGGC 61.577 66.667 0.00 0.00 0.00 6.53
1321 3313 3.264897 CGGAGAAGATTGGCGGCG 61.265 66.667 0.51 0.51 0.00 6.46
1322 3314 2.186903 GGAGAAGATTGGCGGCGA 59.813 61.111 12.98 0.00 0.00 5.54
1323 3315 1.884926 GGAGAAGATTGGCGGCGAG 60.885 63.158 12.98 0.00 0.00 5.03
1324 3316 1.884926 GAGAAGATTGGCGGCGAGG 60.885 63.158 12.98 0.00 0.00 4.63
1325 3317 3.577313 GAAGATTGGCGGCGAGGC 61.577 66.667 12.98 0.00 46.95 4.70
1481 3485 6.183360 TGTTTGAAATAAGAAATGCTGGGTGT 60.183 34.615 0.00 0.00 0.00 4.16
1633 3638 5.306937 TGGTAGAAATGGAGAGTTTGAGACA 59.693 40.000 0.00 0.00 0.00 3.41
1688 3693 9.088987 ACTGTTTGAAATATAAGAAATGTGGGT 57.911 29.630 0.00 0.00 0.00 4.51
1722 3727 8.936864 TGAGTAGAGCTTAAATCTTAAAACAGC 58.063 33.333 0.00 0.00 0.00 4.40
1724 3729 5.631992 AGAGCTTAAATCTTAAAACAGCGC 58.368 37.500 0.00 0.00 0.00 5.92
1862 3882 2.084546 GTTGCCGCCTCTTTGAAGTAT 58.915 47.619 0.00 0.00 0.00 2.12
1866 3886 2.359900 CCGCCTCTTTGAAGTATTGCT 58.640 47.619 0.00 0.00 0.00 3.91
1916 3936 1.606885 ATCATTTGGTTGGGCCGCTG 61.607 55.000 0.00 0.00 41.21 5.18
1941 3961 3.074538 AGATACTTGGGTTCTTGCCTTGT 59.925 43.478 0.00 0.00 0.00 3.16
2073 4093 5.163663 TGCAGCTGTAAAATAAGTATGGCAC 60.164 40.000 16.64 0.00 0.00 5.01
2099 4119 9.097257 CAGAAAAACATAGAACAACAACCAAAT 57.903 29.630 0.00 0.00 0.00 2.32
2170 4190 3.278574 CCATCTGGAATTGGCGACTAAA 58.721 45.455 0.00 0.00 37.39 1.85
2186 4206 6.035758 GGCGACTAAACAACTAATGGTTCTAG 59.964 42.308 0.00 0.00 38.58 2.43
2204 4224 2.970324 TTCGTGACGCCAGTTGCC 60.970 61.111 0.00 0.00 36.24 4.52
2228 4248 1.986882 AGACTGGGTTTGCCTGAAAG 58.013 50.000 0.00 0.00 34.45 2.62
2497 4517 3.845781 ATGTATTGCTCCACTACAGGG 57.154 47.619 2.68 0.00 34.09 4.45
2585 4605 6.959639 TTATTCAGCCCCAATAGTCAAATC 57.040 37.500 0.00 0.00 0.00 2.17
3083 5112 0.905357 ATGAAGCTGACCGCCTACTT 59.095 50.000 0.00 0.00 40.39 2.24
3086 5115 0.037232 AAGCTGACCGCCTACTTGAC 60.037 55.000 0.00 0.00 40.39 3.18
3742 5818 4.453480 TGAATTCAGAAGGTCAAAGGGT 57.547 40.909 3.38 0.00 0.00 4.34
3868 5997 7.065923 CCAATATCTCATGCACATTCCTCATAG 59.934 40.741 0.00 0.00 0.00 2.23
3993 6122 1.979155 GTTGGCTCCCTGGGAAAGC 60.979 63.158 17.81 17.10 0.00 3.51
4023 6152 0.994995 CCAGCGTGAAAGATCTGTCG 59.005 55.000 8.41 6.58 0.00 4.35
4041 6170 0.248661 CGGTATCAGAGGCTGTGACG 60.249 60.000 17.37 12.25 32.61 4.35
4092 6246 9.209175 ACAGAAGTAAGCAGTATTCAGTTTAAG 57.791 33.333 0.00 0.00 0.00 1.85
4093 6247 8.171840 CAGAAGTAAGCAGTATTCAGTTTAAGC 58.828 37.037 0.00 0.00 0.00 3.09
4095 6249 7.365840 AGTAAGCAGTATTCAGTTTAAGCAC 57.634 36.000 0.00 0.00 0.00 4.40
4097 6251 5.869753 AGCAGTATTCAGTTTAAGCACTG 57.130 39.130 1.48 1.48 44.96 3.66
4161 6317 4.771590 TTGATCAGTCTGGTGCAAATTC 57.228 40.909 0.00 0.00 0.00 2.17
4177 6333 2.231215 ATTCAGCAGCGATGGACTAC 57.769 50.000 1.46 0.00 0.00 2.73
4201 6357 0.796312 AGCTGTGCATTTAACCGTCG 59.204 50.000 0.00 0.00 0.00 5.12
4363 6843 3.008517 TTCAGCCGGAGCATGGGA 61.009 61.111 5.05 0.00 43.56 4.37
4369 6849 3.197790 CGGAGCATGGGACTTGCG 61.198 66.667 0.00 0.00 44.82 4.85
4579 7097 2.174639 TGGTCAGAGTTTGGACAACCAT 59.825 45.455 0.00 0.00 46.34 3.55
4608 7126 1.542030 TCCGAGCTCAGAAGTCTTCAC 59.458 52.381 15.40 1.69 0.00 3.18
4653 7171 0.871722 TTGACGCCAAATCTTGACCG 59.128 50.000 0.00 0.00 0.00 4.79
4654 7172 0.953471 TGACGCCAAATCTTGACCGG 60.953 55.000 0.00 0.00 32.26 5.28
4668 7186 1.270625 TGACCGGTTCTTTAGTGCTGG 60.271 52.381 9.42 0.00 0.00 4.85
4674 7192 3.610911 GGTTCTTTAGTGCTGGTATGCT 58.389 45.455 0.00 0.00 0.00 3.79
4737 7256 6.548622 CAGACAGACCCCATTGATTCATTATT 59.451 38.462 0.00 0.00 0.00 1.40
4765 7284 3.194005 ACAGACCAAACGATTCAGTGT 57.806 42.857 0.00 0.00 0.00 3.55
4907 7431 5.902613 TGTATGGAATCAGGCTTTTTCTG 57.097 39.130 6.24 0.00 0.00 3.02
4992 7516 8.004801 TCCAGATAGATTGTATTACCTCAGTCA 58.995 37.037 0.00 0.00 0.00 3.41
4993 7517 8.642432 CCAGATAGATTGTATTACCTCAGTCAA 58.358 37.037 0.00 0.00 0.00 3.18
5020 7567 6.452611 CGACAAATCTAAGACAACTAGTTCGC 60.453 42.308 4.77 0.43 0.00 4.70
5040 7587 1.717645 CGACGGAGGAAGTACAAAACG 59.282 52.381 0.00 0.00 0.00 3.60
5065 7612 4.463050 TTCCTTACACCCTGTTTGGATT 57.537 40.909 0.00 0.00 38.35 3.01
5069 7616 5.073965 TCCTTACACCCTGTTTGGATTTAGT 59.926 40.000 0.00 0.00 38.35 2.24
5072 7619 4.542697 ACACCCTGTTTGGATTTAGTGTT 58.457 39.130 0.00 0.00 34.17 3.32
5078 7625 8.201464 ACCCTGTTTGGATTTAGTGTTAAAAAG 58.799 33.333 0.00 0.00 38.35 2.27
5079 7626 8.417884 CCCTGTTTGGATTTAGTGTTAAAAAGA 58.582 33.333 0.00 0.00 38.35 2.52
5080 7627 9.463443 CCTGTTTGGATTTAGTGTTAAAAAGAG 57.537 33.333 0.00 0.00 38.35 2.85
5086 7633 8.802267 TGGATTTAGTGTTAAAAAGAGAATGGG 58.198 33.333 0.00 0.00 32.80 4.00
5087 7634 8.251026 GGATTTAGTGTTAAAAAGAGAATGGGG 58.749 37.037 0.00 0.00 32.80 4.96
5088 7635 8.721133 ATTTAGTGTTAAAAAGAGAATGGGGT 57.279 30.769 0.00 0.00 32.80 4.95
5089 7636 7.519032 TTAGTGTTAAAAAGAGAATGGGGTG 57.481 36.000 0.00 0.00 0.00 4.61
5090 7637 5.454966 AGTGTTAAAAAGAGAATGGGGTGT 58.545 37.500 0.00 0.00 0.00 4.16
5091 7638 5.897250 AGTGTTAAAAAGAGAATGGGGTGTT 59.103 36.000 0.00 0.00 0.00 3.32
5092 7639 5.983118 GTGTTAAAAAGAGAATGGGGTGTTG 59.017 40.000 0.00 0.00 0.00 3.33
5093 7640 3.751479 AAAAAGAGAATGGGGTGTTGC 57.249 42.857 0.00 0.00 0.00 4.17
5094 7641 2.683211 AAAGAGAATGGGGTGTTGCT 57.317 45.000 0.00 0.00 0.00 3.91
5095 7642 2.683211 AAGAGAATGGGGTGTTGCTT 57.317 45.000 0.00 0.00 0.00 3.91
5096 7643 3.806949 AAGAGAATGGGGTGTTGCTTA 57.193 42.857 0.00 0.00 0.00 3.09
5097 7644 3.806949 AGAGAATGGGGTGTTGCTTAA 57.193 42.857 0.00 0.00 0.00 1.85
5098 7645 4.322057 AGAGAATGGGGTGTTGCTTAAT 57.678 40.909 0.00 0.00 0.00 1.40
5099 7646 4.019174 AGAGAATGGGGTGTTGCTTAATG 58.981 43.478 0.00 0.00 0.00 1.90
5100 7647 3.763897 GAGAATGGGGTGTTGCTTAATGT 59.236 43.478 0.00 0.00 0.00 2.71
5101 7648 3.763897 AGAATGGGGTGTTGCTTAATGTC 59.236 43.478 0.00 0.00 0.00 3.06
5102 7649 2.969821 TGGGGTGTTGCTTAATGTCT 57.030 45.000 0.00 0.00 0.00 3.41
5103 7650 2.513753 TGGGGTGTTGCTTAATGTCTG 58.486 47.619 0.00 0.00 0.00 3.51
5104 7651 1.818674 GGGGTGTTGCTTAATGTCTGG 59.181 52.381 0.00 0.00 0.00 3.86
5105 7652 1.202348 GGGTGTTGCTTAATGTCTGGC 59.798 52.381 0.00 0.00 0.00 4.85
5106 7653 2.162681 GGTGTTGCTTAATGTCTGGCT 58.837 47.619 0.00 0.00 0.00 4.75
5107 7654 2.558359 GGTGTTGCTTAATGTCTGGCTT 59.442 45.455 0.00 0.00 0.00 4.35
5108 7655 3.568538 GTGTTGCTTAATGTCTGGCTTG 58.431 45.455 0.00 0.00 0.00 4.01
5109 7656 2.030007 TGTTGCTTAATGTCTGGCTTGC 60.030 45.455 0.00 0.00 0.00 4.01
5110 7657 2.205022 TGCTTAATGTCTGGCTTGCT 57.795 45.000 0.00 0.00 0.00 3.91
5111 7658 2.517959 TGCTTAATGTCTGGCTTGCTT 58.482 42.857 0.00 0.00 0.00 3.91
5112 7659 3.684908 TGCTTAATGTCTGGCTTGCTTA 58.315 40.909 0.00 0.00 0.00 3.09
5113 7660 4.078537 TGCTTAATGTCTGGCTTGCTTAA 58.921 39.130 0.00 0.00 0.00 1.85
5114 7661 4.522405 TGCTTAATGTCTGGCTTGCTTAAA 59.478 37.500 0.00 0.00 0.00 1.52
5115 7662 5.010516 TGCTTAATGTCTGGCTTGCTTAAAA 59.989 36.000 0.00 0.00 0.00 1.52
5116 7663 6.101997 GCTTAATGTCTGGCTTGCTTAAAAT 58.898 36.000 0.00 0.00 0.00 1.82
5117 7664 6.035327 GCTTAATGTCTGGCTTGCTTAAAATG 59.965 38.462 0.00 0.00 0.00 2.32
5118 7665 3.302365 TGTCTGGCTTGCTTAAAATGC 57.698 42.857 0.00 0.00 0.00 3.56
5119 7666 2.892852 TGTCTGGCTTGCTTAAAATGCT 59.107 40.909 0.00 0.00 0.00 3.79
5120 7667 3.321682 TGTCTGGCTTGCTTAAAATGCTT 59.678 39.130 0.00 0.00 0.00 3.91
5121 7668 4.522405 TGTCTGGCTTGCTTAAAATGCTTA 59.478 37.500 0.00 0.00 0.00 3.09
5122 7669 5.098211 GTCTGGCTTGCTTAAAATGCTTAG 58.902 41.667 0.00 0.00 0.00 2.18
5123 7670 4.766891 TCTGGCTTGCTTAAAATGCTTAGT 59.233 37.500 0.00 0.00 0.00 2.24
5124 7671 5.059404 TGGCTTGCTTAAAATGCTTAGTC 57.941 39.130 0.00 0.00 0.00 2.59
5125 7672 4.522405 TGGCTTGCTTAAAATGCTTAGTCA 59.478 37.500 0.00 0.00 0.00 3.41
5126 7673 5.185635 TGGCTTGCTTAAAATGCTTAGTCAT 59.814 36.000 0.00 0.00 0.00 3.06
5127 7674 6.376864 TGGCTTGCTTAAAATGCTTAGTCATA 59.623 34.615 0.00 0.00 0.00 2.15
5128 7675 7.068593 TGGCTTGCTTAAAATGCTTAGTCATAT 59.931 33.333 0.00 0.00 0.00 1.78
5129 7676 7.380602 GGCTTGCTTAAAATGCTTAGTCATATG 59.619 37.037 0.00 0.00 0.00 1.78
5130 7677 7.096312 GCTTGCTTAAAATGCTTAGTCATATGC 60.096 37.037 0.00 0.00 33.70 3.14
5131 7678 7.572523 TGCTTAAAATGCTTAGTCATATGCT 57.427 32.000 0.00 1.43 34.11 3.79
5132 7679 7.642669 TGCTTAAAATGCTTAGTCATATGCTC 58.357 34.615 0.00 0.00 34.11 4.26
5133 7680 7.080724 GCTTAAAATGCTTAGTCATATGCTCC 58.919 38.462 0.00 0.00 34.11 4.70
5134 7681 7.255242 GCTTAAAATGCTTAGTCATATGCTCCA 60.255 37.037 0.00 0.00 34.11 3.86
5135 7682 8.518430 TTAAAATGCTTAGTCATATGCTCCAA 57.482 30.769 0.00 0.00 34.11 3.53
5136 7683 7.408756 AAAATGCTTAGTCATATGCTCCAAA 57.591 32.000 0.00 0.00 34.11 3.28
5137 7684 7.408756 AAATGCTTAGTCATATGCTCCAAAA 57.591 32.000 0.00 0.00 34.11 2.44
5138 7685 6.630444 ATGCTTAGTCATATGCTCCAAAAG 57.370 37.500 0.00 1.43 34.11 2.27
5147 7694 3.179433 GCTCCAAAAGCGTTCAACC 57.821 52.632 0.00 0.00 42.21 3.77
5148 7695 0.383949 GCTCCAAAAGCGTTCAACCA 59.616 50.000 0.00 0.00 42.21 3.67
5149 7696 1.864029 GCTCCAAAAGCGTTCAACCAC 60.864 52.381 0.00 0.00 42.21 4.16
5150 7697 1.676006 CTCCAAAAGCGTTCAACCACT 59.324 47.619 0.00 0.00 0.00 4.00
5151 7698 2.096248 TCCAAAAGCGTTCAACCACTT 58.904 42.857 0.00 0.00 0.00 3.16
5152 7699 2.494073 TCCAAAAGCGTTCAACCACTTT 59.506 40.909 0.00 0.00 33.92 2.66
5153 7700 2.857748 CCAAAAGCGTTCAACCACTTTC 59.142 45.455 4.17 0.00 31.37 2.62
5154 7701 3.428862 CCAAAAGCGTTCAACCACTTTCT 60.429 43.478 4.17 0.00 31.37 2.52
5155 7702 3.692791 AAAGCGTTCAACCACTTTCTC 57.307 42.857 0.00 0.00 0.00 2.87
5156 7703 2.325583 AGCGTTCAACCACTTTCTCA 57.674 45.000 0.00 0.00 0.00 3.27
5157 7704 2.851195 AGCGTTCAACCACTTTCTCAT 58.149 42.857 0.00 0.00 0.00 2.90
5158 7705 3.214328 AGCGTTCAACCACTTTCTCATT 58.786 40.909 0.00 0.00 0.00 2.57
5159 7706 3.632145 AGCGTTCAACCACTTTCTCATTT 59.368 39.130 0.00 0.00 0.00 2.32
5160 7707 4.097892 AGCGTTCAACCACTTTCTCATTTT 59.902 37.500 0.00 0.00 0.00 1.82
5161 7708 4.441087 GCGTTCAACCACTTTCTCATTTTC 59.559 41.667 0.00 0.00 0.00 2.29
5162 7709 5.577835 CGTTCAACCACTTTCTCATTTTCA 58.422 37.500 0.00 0.00 0.00 2.69
5163 7710 5.455525 CGTTCAACCACTTTCTCATTTTCAC 59.544 40.000 0.00 0.00 0.00 3.18
5164 7711 6.329496 GTTCAACCACTTTCTCATTTTCACA 58.671 36.000 0.00 0.00 0.00 3.58
5165 7712 6.713762 TCAACCACTTTCTCATTTTCACAT 57.286 33.333 0.00 0.00 0.00 3.21
5166 7713 6.506147 TCAACCACTTTCTCATTTTCACATG 58.494 36.000 0.00 0.00 0.00 3.21
5167 7714 6.096705 TCAACCACTTTCTCATTTTCACATGT 59.903 34.615 0.00 0.00 0.00 3.21
5168 7715 5.835257 ACCACTTTCTCATTTTCACATGTG 58.165 37.500 20.18 20.18 0.00 3.21
5169 7716 5.360714 ACCACTTTCTCATTTTCACATGTGT 59.639 36.000 24.63 3.12 0.00 3.72
5170 7717 5.916883 CCACTTTCTCATTTTCACATGTGTC 59.083 40.000 24.63 0.00 0.00 3.67
5171 7718 5.916883 CACTTTCTCATTTTCACATGTGTCC 59.083 40.000 24.63 0.00 0.00 4.02
5172 7719 5.010012 ACTTTCTCATTTTCACATGTGTCCC 59.990 40.000 24.63 0.00 0.00 4.46
5173 7720 4.097551 TCTCATTTTCACATGTGTCCCA 57.902 40.909 24.63 8.72 0.00 4.37
5174 7721 4.468713 TCTCATTTTCACATGTGTCCCAA 58.531 39.130 24.63 9.54 0.00 4.12
5175 7722 4.892345 TCTCATTTTCACATGTGTCCCAAA 59.108 37.500 24.63 18.05 0.00 3.28
5176 7723 4.942852 TCATTTTCACATGTGTCCCAAAC 58.057 39.130 24.63 0.00 0.00 2.93
5177 7724 3.810310 TTTTCACATGTGTCCCAAACC 57.190 42.857 24.63 0.00 0.00 3.27
5178 7725 2.443958 TTCACATGTGTCCCAAACCA 57.556 45.000 24.63 0.00 0.00 3.67
5179 7726 2.443958 TCACATGTGTCCCAAACCAA 57.556 45.000 24.63 0.00 0.00 3.67
5180 7727 2.739943 TCACATGTGTCCCAAACCAAA 58.260 42.857 24.63 0.00 0.00 3.28
5181 7728 3.099905 TCACATGTGTCCCAAACCAAAA 58.900 40.909 24.63 0.00 0.00 2.44
5182 7729 3.131933 TCACATGTGTCCCAAACCAAAAG 59.868 43.478 24.63 0.00 0.00 2.27
5183 7730 3.103742 ACATGTGTCCCAAACCAAAAGT 58.896 40.909 0.00 0.00 0.00 2.66
5184 7731 3.132111 ACATGTGTCCCAAACCAAAAGTC 59.868 43.478 0.00 0.00 0.00 3.01
5185 7732 2.808919 TGTGTCCCAAACCAAAAGTCA 58.191 42.857 0.00 0.00 0.00 3.41
5186 7733 3.165875 TGTGTCCCAAACCAAAAGTCAA 58.834 40.909 0.00 0.00 0.00 3.18
5187 7734 3.578716 TGTGTCCCAAACCAAAAGTCAAA 59.421 39.130 0.00 0.00 0.00 2.69
5188 7735 3.930229 GTGTCCCAAACCAAAAGTCAAAC 59.070 43.478 0.00 0.00 0.00 2.93
5189 7736 3.835395 TGTCCCAAACCAAAAGTCAAACT 59.165 39.130 0.00 0.00 0.00 2.66
5190 7737 4.284746 TGTCCCAAACCAAAAGTCAAACTT 59.715 37.500 0.00 0.00 40.80 2.66
5191 7738 4.629634 GTCCCAAACCAAAAGTCAAACTTG 59.370 41.667 0.00 0.00 38.66 3.16
5192 7739 3.938334 CCCAAACCAAAAGTCAAACTTGG 59.062 43.478 0.00 0.00 44.35 3.61
5198 7745 5.778161 CCAAAAGTCAAACTTGGTTTCAC 57.222 39.130 0.00 0.00 38.66 3.18
5199 7746 4.629634 CCAAAAGTCAAACTTGGTTTCACC 59.370 41.667 0.00 0.00 38.66 4.02
5200 7747 3.775661 AAGTCAAACTTGGTTTCACCG 57.224 42.857 0.00 0.00 42.58 4.94
5201 7748 2.993937 AGTCAAACTTGGTTTCACCGA 58.006 42.857 0.00 0.00 42.58 4.69
5202 7749 3.551846 AGTCAAACTTGGTTTCACCGAT 58.448 40.909 0.00 0.00 42.58 4.18
5203 7750 3.951680 AGTCAAACTTGGTTTCACCGATT 59.048 39.130 0.00 0.00 42.58 3.34
5204 7751 4.401202 AGTCAAACTTGGTTTCACCGATTT 59.599 37.500 0.00 0.00 42.58 2.17
5205 7752 4.502645 GTCAAACTTGGTTTCACCGATTTG 59.497 41.667 8.84 8.84 42.58 2.32
5206 7753 4.399618 TCAAACTTGGTTTCACCGATTTGA 59.600 37.500 11.92 11.92 42.58 2.69
5207 7754 5.068460 TCAAACTTGGTTTCACCGATTTGAT 59.932 36.000 11.92 0.00 42.58 2.57
5208 7755 4.766404 ACTTGGTTTCACCGATTTGATC 57.234 40.909 0.00 0.00 42.58 2.92
5209 7756 4.398319 ACTTGGTTTCACCGATTTGATCT 58.602 39.130 0.00 0.00 42.58 2.75
5210 7757 5.556915 ACTTGGTTTCACCGATTTGATCTA 58.443 37.500 0.00 0.00 42.58 1.98
5211 7758 6.180472 ACTTGGTTTCACCGATTTGATCTAT 58.820 36.000 0.00 0.00 42.58 1.98
5212 7759 6.316390 ACTTGGTTTCACCGATTTGATCTATC 59.684 38.462 0.00 0.00 42.58 2.08
5213 7760 5.123227 TGGTTTCACCGATTTGATCTATCC 58.877 41.667 0.00 0.00 42.58 2.59
5214 7761 4.211374 GGTTTCACCGATTTGATCTATCCG 59.789 45.833 0.00 0.00 0.00 4.18
5215 7762 3.660501 TCACCGATTTGATCTATCCGG 57.339 47.619 13.25 13.25 0.00 5.14
5216 7763 2.963101 TCACCGATTTGATCTATCCGGT 59.037 45.455 14.24 14.24 32.80 5.28
5217 7764 3.059884 CACCGATTTGATCTATCCGGTG 58.940 50.000 24.26 24.26 35.68 4.94
5218 7765 2.069273 CCGATTTGATCTATCCGGTGC 58.931 52.381 0.00 0.00 0.00 5.01
5219 7766 2.069273 CGATTTGATCTATCCGGTGCC 58.931 52.381 0.00 0.00 0.00 5.01
5220 7767 2.547855 CGATTTGATCTATCCGGTGCCA 60.548 50.000 0.00 0.00 0.00 4.92
5221 7768 2.325583 TTTGATCTATCCGGTGCCAC 57.674 50.000 0.00 0.00 0.00 5.01
5222 7769 0.468226 TTGATCTATCCGGTGCCACC 59.532 55.000 2.98 2.98 34.05 4.61
5231 7778 4.397348 GGTGCCACCGAGTTCATT 57.603 55.556 0.00 0.00 0.00 2.57
5232 7779 2.641197 GGTGCCACCGAGTTCATTT 58.359 52.632 0.00 0.00 0.00 2.32
5233 7780 0.240945 GGTGCCACCGAGTTCATTTG 59.759 55.000 0.00 0.00 0.00 2.32
5234 7781 1.234821 GTGCCACCGAGTTCATTTGA 58.765 50.000 0.00 0.00 0.00 2.69
5235 7782 1.069227 GTGCCACCGAGTTCATTTGAC 60.069 52.381 0.00 0.00 0.00 3.18
5236 7783 1.234821 GCCACCGAGTTCATTTGACA 58.765 50.000 0.00 0.00 0.00 3.58
5237 7784 1.812571 GCCACCGAGTTCATTTGACAT 59.187 47.619 0.00 0.00 0.00 3.06
5238 7785 3.006940 GCCACCGAGTTCATTTGACATA 58.993 45.455 0.00 0.00 0.00 2.29
5239 7786 3.063997 GCCACCGAGTTCATTTGACATAG 59.936 47.826 0.00 0.00 0.00 2.23
5240 7787 4.253685 CCACCGAGTTCATTTGACATAGT 58.746 43.478 0.00 0.00 0.00 2.12
5241 7788 4.330074 CCACCGAGTTCATTTGACATAGTC 59.670 45.833 0.00 0.00 0.00 2.59
5242 7789 4.929211 CACCGAGTTCATTTGACATAGTCA 59.071 41.667 0.00 0.00 41.09 3.41
5243 7790 5.582269 CACCGAGTTCATTTGACATAGTCAT 59.418 40.000 0.12 0.00 42.40 3.06
5244 7791 6.756542 CACCGAGTTCATTTGACATAGTCATA 59.243 38.462 0.12 0.00 42.40 2.15
5245 7792 6.980978 ACCGAGTTCATTTGACATAGTCATAG 59.019 38.462 0.12 0.00 42.40 2.23
5246 7793 7.147897 ACCGAGTTCATTTGACATAGTCATAGA 60.148 37.037 0.12 0.00 42.40 1.98
5247 7794 7.168302 CCGAGTTCATTTGACATAGTCATAGAC 59.832 40.741 0.12 0.00 42.40 2.59
5248 7795 7.702348 CGAGTTCATTTGACATAGTCATAGACA 59.298 37.037 0.12 0.00 42.40 3.41
5249 7796 8.939201 AGTTCATTTGACATAGTCATAGACAG 57.061 34.615 0.12 0.00 42.40 3.51
5250 7797 8.753133 AGTTCATTTGACATAGTCATAGACAGA 58.247 33.333 0.12 0.00 42.40 3.41
5251 7798 9.371136 GTTCATTTGACATAGTCATAGACAGAA 57.629 33.333 0.12 0.00 42.40 3.02
5252 7799 9.942850 TTCATTTGACATAGTCATAGACAGAAA 57.057 29.630 0.12 0.00 42.40 2.52
5253 7800 9.371136 TCATTTGACATAGTCATAGACAGAAAC 57.629 33.333 0.12 0.00 42.40 2.78
5254 7801 8.607459 CATTTGACATAGTCATAGACAGAAACC 58.393 37.037 0.12 0.00 42.40 3.27
5255 7802 6.222038 TGACATAGTCATAGACAGAAACCC 57.778 41.667 0.00 0.00 37.67 4.11
5256 7803 5.958380 TGACATAGTCATAGACAGAAACCCT 59.042 40.000 0.00 0.00 37.67 4.34
5257 7804 7.123383 TGACATAGTCATAGACAGAAACCCTA 58.877 38.462 0.00 0.00 37.67 3.53
5258 7805 7.618117 TGACATAGTCATAGACAGAAACCCTAA 59.382 37.037 0.00 0.00 37.67 2.69
5259 7806 8.554490 ACATAGTCATAGACAGAAACCCTAAT 57.446 34.615 0.00 0.00 34.60 1.73
5260 7807 8.643324 ACATAGTCATAGACAGAAACCCTAATC 58.357 37.037 0.00 0.00 34.60 1.75
5261 7808 8.642432 CATAGTCATAGACAGAAACCCTAATCA 58.358 37.037 0.00 0.00 34.60 2.57
5262 7809 7.682787 AGTCATAGACAGAAACCCTAATCAT 57.317 36.000 0.00 0.00 34.60 2.45
5263 7810 8.095452 AGTCATAGACAGAAACCCTAATCATT 57.905 34.615 0.00 0.00 34.60 2.57
5264 7811 8.552296 AGTCATAGACAGAAACCCTAATCATTT 58.448 33.333 0.00 0.00 34.60 2.32
5265 7812 8.831550 GTCATAGACAGAAACCCTAATCATTTC 58.168 37.037 0.00 0.00 32.09 2.17
5266 7813 7.710907 TCATAGACAGAAACCCTAATCATTTCG 59.289 37.037 0.00 0.00 37.41 3.46
5267 7814 5.186198 AGACAGAAACCCTAATCATTTCGG 58.814 41.667 0.00 0.00 37.41 4.30
5268 7815 4.918588 ACAGAAACCCTAATCATTTCGGT 58.081 39.130 0.00 0.00 37.41 4.69
5269 7816 4.941873 ACAGAAACCCTAATCATTTCGGTC 59.058 41.667 0.00 0.00 36.45 4.79
5270 7817 5.186198 CAGAAACCCTAATCATTTCGGTCT 58.814 41.667 0.00 0.00 37.41 3.85
5271 7818 5.294552 CAGAAACCCTAATCATTTCGGTCTC 59.705 44.000 0.00 0.00 37.41 3.36
5272 7819 4.837093 AACCCTAATCATTTCGGTCTCA 57.163 40.909 0.00 0.00 0.00 3.27
5273 7820 4.138487 ACCCTAATCATTTCGGTCTCAC 57.862 45.455 0.00 0.00 0.00 3.51
5274 7821 3.118371 ACCCTAATCATTTCGGTCTCACC 60.118 47.826 0.00 0.00 34.05 4.02
5293 7840 2.186532 CGATAGGGATCTCGGTCTCA 57.813 55.000 0.00 0.00 0.00 3.27
5294 7841 1.807742 CGATAGGGATCTCGGTCTCAC 59.192 57.143 0.00 0.00 0.00 3.51
5295 7842 2.164338 GATAGGGATCTCGGTCTCACC 58.836 57.143 0.00 0.00 34.05 4.02
5304 7851 4.356979 GGTCTCACCGAGATGGGA 57.643 61.111 0.00 0.00 40.98 4.37
5305 7852 2.827715 GGTCTCACCGAGATGGGAT 58.172 57.895 0.00 0.00 40.98 3.85
5306 7853 1.123928 GGTCTCACCGAGATGGGATT 58.876 55.000 0.00 0.00 40.98 3.01
5307 7854 1.202580 GGTCTCACCGAGATGGGATTG 60.203 57.143 0.00 0.00 40.98 2.67
5308 7855 0.465705 TCTCACCGAGATGGGATTGC 59.534 55.000 0.00 0.00 44.64 3.56
5309 7856 0.178767 CTCACCGAGATGGGATTGCA 59.821 55.000 0.00 0.00 44.64 4.08
5310 7857 0.617935 TCACCGAGATGGGATTGCAA 59.382 50.000 0.00 0.00 44.64 4.08
5311 7858 1.004161 TCACCGAGATGGGATTGCAAA 59.996 47.619 1.71 0.00 44.64 3.68
5312 7859 1.133025 CACCGAGATGGGATTGCAAAC 59.867 52.381 1.71 0.00 44.64 2.93
5313 7860 1.004745 ACCGAGATGGGATTGCAAACT 59.995 47.619 1.71 0.00 44.64 2.66
5314 7861 1.672881 CCGAGATGGGATTGCAAACTC 59.327 52.381 1.71 0.00 0.00 3.01
5315 7862 2.636830 CGAGATGGGATTGCAAACTCT 58.363 47.619 1.71 0.00 0.00 3.24
5316 7863 2.611292 CGAGATGGGATTGCAAACTCTC 59.389 50.000 1.71 8.66 0.00 3.20
5317 7864 3.681034 CGAGATGGGATTGCAAACTCTCT 60.681 47.826 16.91 12.71 0.00 3.10
5318 7865 3.618351 AGATGGGATTGCAAACTCTCTG 58.382 45.455 1.71 0.00 0.00 3.35
5319 7866 2.957402 TGGGATTGCAAACTCTCTGT 57.043 45.000 1.71 0.00 0.00 3.41
5320 7867 3.228188 TGGGATTGCAAACTCTCTGTT 57.772 42.857 1.71 0.00 41.29 3.16
5322 7869 3.569701 TGGGATTGCAAACTCTCTGTTTC 59.430 43.478 1.71 0.00 46.11 2.78
5323 7870 3.057245 GGGATTGCAAACTCTCTGTTTCC 60.057 47.826 1.71 1.07 46.11 3.13
5324 7871 3.057245 GGATTGCAAACTCTCTGTTTCCC 60.057 47.826 1.71 0.00 46.11 3.97
5325 7872 3.297134 TTGCAAACTCTCTGTTTCCCT 57.703 42.857 0.00 0.00 46.11 4.20
5326 7873 3.297134 TGCAAACTCTCTGTTTCCCTT 57.703 42.857 0.00 0.00 46.11 3.95
5327 7874 3.214328 TGCAAACTCTCTGTTTCCCTTC 58.786 45.455 0.00 0.00 46.11 3.46
5328 7875 2.224314 GCAAACTCTCTGTTTCCCTTCG 59.776 50.000 0.00 0.00 46.11 3.79
5329 7876 3.467803 CAAACTCTCTGTTTCCCTTCGT 58.532 45.455 0.00 0.00 46.11 3.85
5330 7877 4.628074 CAAACTCTCTGTTTCCCTTCGTA 58.372 43.478 0.00 0.00 46.11 3.43
5331 7878 4.950205 AACTCTCTGTTTCCCTTCGTAA 57.050 40.909 0.00 0.00 34.84 3.18
5332 7879 4.254402 ACTCTCTGTTTCCCTTCGTAAC 57.746 45.455 0.00 0.00 0.00 2.50
5333 7880 3.243336 CTCTCTGTTTCCCTTCGTAACG 58.757 50.000 0.00 0.00 0.00 3.18
5334 7881 2.624838 TCTCTGTTTCCCTTCGTAACGT 59.375 45.455 0.00 0.00 0.00 3.99
5335 7882 3.068590 TCTCTGTTTCCCTTCGTAACGTT 59.931 43.478 5.88 5.88 0.00 3.99
5336 7883 3.795877 TCTGTTTCCCTTCGTAACGTTT 58.204 40.909 5.91 0.00 0.00 3.60
5337 7884 3.803778 TCTGTTTCCCTTCGTAACGTTTC 59.196 43.478 5.91 0.00 0.00 2.78
5338 7885 3.529533 TGTTTCCCTTCGTAACGTTTCA 58.470 40.909 5.91 0.00 0.00 2.69
5339 7886 3.556775 TGTTTCCCTTCGTAACGTTTCAG 59.443 43.478 5.91 0.00 0.00 3.02
5340 7887 3.457610 TTCCCTTCGTAACGTTTCAGT 57.542 42.857 5.91 0.00 0.00 3.41
5341 7888 3.017265 TCCCTTCGTAACGTTTCAGTC 57.983 47.619 5.91 0.00 0.00 3.51
5342 7889 2.624838 TCCCTTCGTAACGTTTCAGTCT 59.375 45.455 5.91 0.00 0.00 3.24
5343 7890 3.820467 TCCCTTCGTAACGTTTCAGTCTA 59.180 43.478 5.91 0.00 0.00 2.59
5344 7891 4.278170 TCCCTTCGTAACGTTTCAGTCTAA 59.722 41.667 5.91 0.00 0.00 2.10
5345 7892 4.383948 CCCTTCGTAACGTTTCAGTCTAAC 59.616 45.833 5.91 0.00 0.00 2.34
5346 7893 4.383948 CCTTCGTAACGTTTCAGTCTAACC 59.616 45.833 5.91 0.00 0.00 2.85
5347 7894 3.554524 TCGTAACGTTTCAGTCTAACCG 58.445 45.455 5.91 0.00 0.00 4.44
5348 7895 3.249799 TCGTAACGTTTCAGTCTAACCGA 59.750 43.478 5.91 0.00 0.00 4.69
5349 7896 3.601211 CGTAACGTTTCAGTCTAACCGAG 59.399 47.826 5.91 0.00 0.00 4.63
5350 7897 3.996150 AACGTTTCAGTCTAACCGAGA 57.004 42.857 0.00 0.00 0.00 4.04
5351 7898 4.516365 AACGTTTCAGTCTAACCGAGAT 57.484 40.909 0.00 0.00 36.29 2.75
5352 7899 3.834610 ACGTTTCAGTCTAACCGAGATG 58.165 45.455 0.00 0.00 36.29 2.90
5353 7900 3.504906 ACGTTTCAGTCTAACCGAGATGA 59.495 43.478 0.00 0.00 36.29 2.92
5354 7901 4.099120 CGTTTCAGTCTAACCGAGATGAG 58.901 47.826 0.00 0.00 36.29 2.90
5355 7902 3.784701 TTCAGTCTAACCGAGATGAGC 57.215 47.619 0.00 0.00 36.29 4.26
5356 7903 1.671328 TCAGTCTAACCGAGATGAGCG 59.329 52.381 0.00 0.00 36.29 5.03
5357 7904 1.671328 CAGTCTAACCGAGATGAGCGA 59.329 52.381 0.00 0.00 36.29 4.93
5358 7905 2.292016 CAGTCTAACCGAGATGAGCGAT 59.708 50.000 0.00 0.00 36.29 4.58
5359 7906 2.550606 AGTCTAACCGAGATGAGCGATC 59.449 50.000 0.00 0.00 36.29 3.69
5360 7907 1.531578 TCTAACCGAGATGAGCGATCG 59.468 52.381 11.69 11.69 36.04 3.69
5363 7910 4.524305 CGAGATGAGCGATCGGTC 57.476 61.111 34.11 34.11 42.37 4.79
5364 7911 1.081774 CGAGATGAGCGATCGGTCC 60.082 63.158 36.26 24.94 41.45 4.46
5365 7912 1.287503 GAGATGAGCGATCGGTCCC 59.712 63.158 36.26 28.38 41.45 4.46
5366 7913 1.455773 AGATGAGCGATCGGTCCCA 60.456 57.895 36.26 24.17 41.45 4.37
5367 7914 1.300233 GATGAGCGATCGGTCCCAC 60.300 63.158 36.26 25.07 41.45 4.61
5368 7915 2.701163 GATGAGCGATCGGTCCCACC 62.701 65.000 36.26 21.72 41.45 4.61
5377 7924 3.998672 GGTCCCACCGAGTTCGCA 61.999 66.667 0.00 0.00 38.18 5.10
5378 7925 2.029964 GTCCCACCGAGTTCGCAA 59.970 61.111 0.00 0.00 38.18 4.85
5379 7926 1.375523 GTCCCACCGAGTTCGCAAT 60.376 57.895 0.00 0.00 38.18 3.56
5380 7927 1.375396 TCCCACCGAGTTCGCAATG 60.375 57.895 0.00 0.00 38.18 2.82
5381 7928 2.480555 CCACCGAGTTCGCAATGC 59.519 61.111 0.00 0.00 38.18 3.56
5382 7929 2.324330 CCACCGAGTTCGCAATGCA 61.324 57.895 5.91 0.00 38.18 3.96
5383 7930 1.573932 CACCGAGTTCGCAATGCAA 59.426 52.632 5.91 0.00 38.18 4.08
5384 7931 0.040514 CACCGAGTTCGCAATGCAAA 60.041 50.000 5.91 0.00 38.18 3.68
5385 7932 0.040425 ACCGAGTTCGCAATGCAAAC 60.040 50.000 5.91 2.87 38.18 2.93
5386 7933 0.238289 CCGAGTTCGCAATGCAAACT 59.762 50.000 11.74 11.74 38.18 2.66
5387 7934 1.595609 CGAGTTCGCAATGCAAACTC 58.404 50.000 24.56 24.56 0.00 3.01
5388 7935 1.195448 CGAGTTCGCAATGCAAACTCT 59.805 47.619 29.09 10.40 0.00 3.24
5389 7936 2.723010 CGAGTTCGCAATGCAAACTCTC 60.723 50.000 29.09 16.25 0.00 3.20
5390 7937 2.481952 GAGTTCGCAATGCAAACTCTCT 59.518 45.455 26.40 0.12 0.00 3.10
5391 7938 2.225019 AGTTCGCAATGCAAACTCTCTG 59.775 45.455 5.63 0.00 0.00 3.35
5392 7939 1.882912 TCGCAATGCAAACTCTCTGT 58.117 45.000 5.91 0.00 0.00 3.41
5393 7940 2.221169 TCGCAATGCAAACTCTCTGTT 58.779 42.857 5.91 0.00 41.29 3.16
5395 7942 3.066621 TCGCAATGCAAACTCTCTGTTTT 59.933 39.130 5.91 0.00 45.69 2.43
5396 7943 3.423206 CGCAATGCAAACTCTCTGTTTTC 59.577 43.478 5.91 0.00 45.69 2.29
5397 7944 3.737774 GCAATGCAAACTCTCTGTTTTCC 59.262 43.478 0.00 0.00 45.69 3.13
5398 7945 4.500375 GCAATGCAAACTCTCTGTTTTCCT 60.500 41.667 0.00 0.00 45.69 3.36
5399 7946 5.594926 CAATGCAAACTCTCTGTTTTCCTT 58.405 37.500 0.00 0.00 45.69 3.36
5400 7947 4.900635 TGCAAACTCTCTGTTTTCCTTC 57.099 40.909 0.00 0.00 45.69 3.46
5401 7948 3.632145 TGCAAACTCTCTGTTTTCCTTCC 59.368 43.478 0.00 0.00 45.69 3.46
5402 7949 3.304057 GCAAACTCTCTGTTTTCCTTCCG 60.304 47.826 0.00 0.00 45.69 4.30
5403 7950 3.840124 AACTCTCTGTTTTCCTTCCGT 57.160 42.857 0.00 0.00 34.84 4.69
5404 7951 4.950205 AACTCTCTGTTTTCCTTCCGTA 57.050 40.909 0.00 0.00 34.84 4.02
5405 7952 4.950205 ACTCTCTGTTTTCCTTCCGTAA 57.050 40.909 0.00 0.00 0.00 3.18
5406 7953 4.629092 ACTCTCTGTTTTCCTTCCGTAAC 58.371 43.478 0.00 0.00 0.00 2.50
5407 7954 3.645884 TCTCTGTTTTCCTTCCGTAACG 58.354 45.455 0.00 0.00 0.00 3.18
5408 7955 3.068590 TCTCTGTTTTCCTTCCGTAACGT 59.931 43.478 0.00 0.00 0.00 3.99
5409 7956 3.795877 TCTGTTTTCCTTCCGTAACGTT 58.204 40.909 5.88 5.88 0.00 3.99
5410 7957 4.190772 TCTGTTTTCCTTCCGTAACGTTT 58.809 39.130 5.91 0.00 0.00 3.60
5411 7958 4.270808 TCTGTTTTCCTTCCGTAACGTTTC 59.729 41.667 5.91 0.00 0.00 2.78
5412 7959 3.001127 TGTTTTCCTTCCGTAACGTTTCG 59.999 43.478 18.90 18.90 0.00 3.46
5413 7960 1.782044 TTCCTTCCGTAACGTTTCGG 58.218 50.000 32.77 32.77 46.93 4.30
5414 7961 0.673437 TCCTTCCGTAACGTTTCGGT 59.327 50.000 35.17 4.05 45.88 4.69
5415 7962 1.063031 CCTTCCGTAACGTTTCGGTC 58.937 55.000 35.17 10.50 45.88 4.79
5416 7963 1.336240 CCTTCCGTAACGTTTCGGTCT 60.336 52.381 35.17 2.53 45.88 3.85
5417 7964 1.981533 CTTCCGTAACGTTTCGGTCTC 59.018 52.381 35.17 7.54 45.88 3.36
5418 7965 0.950836 TCCGTAACGTTTCGGTCTCA 59.049 50.000 35.17 20.11 45.88 3.27
5419 7966 1.541147 TCCGTAACGTTTCGGTCTCAT 59.459 47.619 35.17 0.26 45.88 2.90
5420 7967 1.916000 CCGTAACGTTTCGGTCTCATC 59.084 52.381 30.99 0.98 41.58 2.92
5421 7968 1.576246 CGTAACGTTTCGGTCTCATCG 59.424 52.381 18.20 0.58 0.00 3.84
5422 7969 2.725759 CGTAACGTTTCGGTCTCATCGA 60.726 50.000 18.20 0.00 34.62 3.59
5423 7970 2.427232 AACGTTTCGGTCTCATCGAA 57.573 45.000 0.00 0.00 43.61 3.71
5436 7983 3.443099 TCATCGAAATGAGCGATCAGT 57.557 42.857 10.08 2.79 45.74 3.41
5437 7984 3.785486 TCATCGAAATGAGCGATCAGTT 58.215 40.909 16.95 16.95 45.74 3.16
5438 7985 4.183865 TCATCGAAATGAGCGATCAGTTT 58.816 39.130 18.00 13.20 45.74 2.66
5439 7986 4.268644 TCATCGAAATGAGCGATCAGTTTC 59.731 41.667 18.00 18.99 45.74 2.78
5440 7987 3.584834 TCGAAATGAGCGATCAGTTTCA 58.415 40.909 18.00 4.77 32.09 2.69
5441 7988 4.183865 TCGAAATGAGCGATCAGTTTCAT 58.816 39.130 18.00 0.00 32.09 2.57
5442 7989 4.268644 TCGAAATGAGCGATCAGTTTCATC 59.731 41.667 18.00 4.16 32.09 2.92
5443 7990 4.033243 CGAAATGAGCGATCAGTTTCATCA 59.967 41.667 18.00 0.00 30.39 3.07
5444 7991 5.446340 CGAAATGAGCGATCAGTTTCATCAA 60.446 40.000 18.00 0.00 30.39 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 9.757227 GCTCTAGTGATCTAAAACATCTTACAT 57.243 33.333 0.00 0.00 0.00 2.29
37 38 8.749354 TGCTCTAGTGATCTAAAACATCTTACA 58.251 33.333 0.00 0.00 0.00 2.41
38 39 9.587772 TTGCTCTAGTGATCTAAAACATCTTAC 57.412 33.333 0.00 0.00 0.00 2.34
40 41 9.678260 AATTGCTCTAGTGATCTAAAACATCTT 57.322 29.630 0.00 0.00 0.00 2.40
44 45 8.758829 TCCTAATTGCTCTAGTGATCTAAAACA 58.241 33.333 0.00 0.00 0.00 2.83
49 50 9.988815 GAAATTCCTAATTGCTCTAGTGATCTA 57.011 33.333 0.00 0.00 0.00 1.98
50 51 8.713036 AGAAATTCCTAATTGCTCTAGTGATCT 58.287 33.333 0.00 0.00 30.70 2.75
52 53 9.771534 GTAGAAATTCCTAATTGCTCTAGTGAT 57.228 33.333 0.00 0.00 37.86 3.06
53 54 7.921214 CGTAGAAATTCCTAATTGCTCTAGTGA 59.079 37.037 0.00 0.00 37.86 3.41
54 55 7.921214 TCGTAGAAATTCCTAATTGCTCTAGTG 59.079 37.037 0.00 0.00 37.86 2.74
56 57 8.873215 TTCGTAGAAATTCCTAATTGCTCTAG 57.127 34.615 0.00 0.00 45.90 2.43
68 207 7.787725 ATTAGGACACATTCGTAGAAATTCC 57.212 36.000 0.00 0.00 45.90 3.01
77 216 9.106070 GGAAAGTATTTATTAGGACACATTCGT 57.894 33.333 0.00 0.00 39.27 3.85
78 217 9.104965 TGGAAAGTATTTATTAGGACACATTCG 57.895 33.333 0.00 0.00 39.27 3.34
84 550 9.667107 CTGTTCTGGAAAGTATTTATTAGGACA 57.333 33.333 0.00 0.00 39.27 4.02
145 612 1.422024 TCAAATCCCACTCCGGTCAAA 59.578 47.619 0.00 0.00 0.00 2.69
234 2167 1.489230 GGACAATCCCAATAGTCGGGT 59.511 52.381 0.00 0.00 44.81 5.28
235 2168 2.256117 GGACAATCCCAATAGTCGGG 57.744 55.000 0.00 0.00 46.03 5.14
251 2184 5.942826 GGAATTCCATTCTGATATGAGGGAC 59.057 44.000 20.04 0.00 39.24 4.46
254 2187 6.654161 GTCAGGAATTCCATTCTGATATGAGG 59.346 42.308 26.22 0.00 39.24 3.86
255 2188 6.654161 GGTCAGGAATTCCATTCTGATATGAG 59.346 42.308 26.22 0.56 39.24 2.90
257 2190 6.301486 TGGTCAGGAATTCCATTCTGATATG 58.699 40.000 26.22 12.12 39.24 1.78
263 2196 3.359950 GCTTGGTCAGGAATTCCATTCT 58.640 45.455 26.22 2.40 39.24 2.40
268 2201 1.177401 GTGGCTTGGTCAGGAATTCC 58.823 55.000 17.31 17.31 0.00 3.01
269 2202 2.206576 AGTGGCTTGGTCAGGAATTC 57.793 50.000 0.00 0.00 0.00 2.17
290 2223 9.767228 TGTTTCTGATGAATTGATGAAAAACAT 57.233 25.926 0.00 0.00 35.53 2.71
291 2224 9.251792 CTGTTTCTGATGAATTGATGAAAAACA 57.748 29.630 0.00 0.00 33.40 2.83
292 2225 9.467258 TCTGTTTCTGATGAATTGATGAAAAAC 57.533 29.630 0.00 0.00 31.56 2.43
301 2238 8.060090 GCTTTTGTTTCTGTTTCTGATGAATTG 58.940 33.333 0.00 0.00 31.56 2.32
302 2239 7.765360 TGCTTTTGTTTCTGTTTCTGATGAATT 59.235 29.630 0.00 0.00 31.56 2.17
304 2241 6.629128 TGCTTTTGTTTCTGTTTCTGATGAA 58.371 32.000 0.00 0.00 0.00 2.57
339 2276 1.345415 TCTGGTCCGAGGGTAAAACAC 59.655 52.381 0.00 0.00 0.00 3.32
407 2344 3.200825 CAGGTGGGTGGATAGAACTTCAT 59.799 47.826 0.00 0.00 0.00 2.57
413 2350 0.253160 AGCCAGGTGGGTGGATAGAA 60.253 55.000 0.00 0.00 45.50 2.10
420 2357 1.264749 TGTAGCTAGCCAGGTGGGTG 61.265 60.000 12.13 2.62 46.80 4.61
435 2372 4.269603 CGAAGCCATGACTCTGATTTGTAG 59.730 45.833 0.00 0.00 0.00 2.74
436 2373 4.183865 CGAAGCCATGACTCTGATTTGTA 58.816 43.478 0.00 0.00 0.00 2.41
437 2374 3.005554 CGAAGCCATGACTCTGATTTGT 58.994 45.455 0.00 0.00 0.00 2.83
438 2375 3.670311 CGAAGCCATGACTCTGATTTG 57.330 47.619 0.00 0.00 0.00 2.32
474 2416 0.249868 ATGACCACCCATGCGATACG 60.250 55.000 0.00 0.00 0.00 3.06
479 2421 0.382873 CATGAATGACCACCCATGCG 59.617 55.000 0.00 0.00 31.43 4.73
484 2426 0.331278 TCCACCATGAATGACCACCC 59.669 55.000 0.00 0.00 0.00 4.61
525 2467 3.524541 TCATCATCCATCACAGTTCACG 58.475 45.455 0.00 0.00 0.00 4.35
526 2468 5.121105 TCATCATCATCCATCACAGTTCAC 58.879 41.667 0.00 0.00 0.00 3.18
527 2469 5.362105 TCATCATCATCCATCACAGTTCA 57.638 39.130 0.00 0.00 0.00 3.18
528 2470 5.334957 GCATCATCATCATCCATCACAGTTC 60.335 44.000 0.00 0.00 0.00 3.01
529 2471 4.519350 GCATCATCATCATCCATCACAGTT 59.481 41.667 0.00 0.00 0.00 3.16
530 2472 4.072839 GCATCATCATCATCCATCACAGT 58.927 43.478 0.00 0.00 0.00 3.55
531 2473 3.440522 GGCATCATCATCATCCATCACAG 59.559 47.826 0.00 0.00 0.00 3.66
554 2496 0.179156 CATCGATGCCACCAACAAGC 60.179 55.000 13.37 0.00 0.00 4.01
729 2682 5.163612 GGGACAGGATATCAAAAGCAAGTTC 60.164 44.000 4.83 0.00 0.00 3.01
732 2685 4.337555 CAGGGACAGGATATCAAAAGCAAG 59.662 45.833 4.83 0.00 0.00 4.01
827 2812 6.721571 ATTACAGAGAACCACATTTGTACG 57.278 37.500 0.00 0.00 0.00 3.67
828 2813 7.326063 GCAAATTACAGAGAACCACATTTGTAC 59.674 37.037 0.00 0.00 34.20 2.90
829 2814 7.367285 GCAAATTACAGAGAACCACATTTGTA 58.633 34.615 0.00 0.00 34.20 2.41
830 2815 6.215845 GCAAATTACAGAGAACCACATTTGT 58.784 36.000 0.00 0.00 34.20 2.83
1104 3093 3.342477 GCCAGGGAAGAAGGGGCT 61.342 66.667 0.00 0.00 41.39 5.19
1474 3478 5.505985 GCTCTATACTCGTAGAAACACCCAG 60.506 48.000 0.00 0.00 34.09 4.45
1633 3638 3.055094 AGGCGACATTAACTGACCTCAAT 60.055 43.478 0.00 0.00 0.00 2.57
1722 3727 5.986004 ATTCTAAATTTCTTCCTACCGCG 57.014 39.130 0.00 0.00 0.00 6.46
1724 3729 8.943909 ACAGTATTCTAAATTTCTTCCTACCG 57.056 34.615 0.00 0.00 0.00 4.02
1862 3882 2.946329 ACCGTAATGTCAAACACAGCAA 59.054 40.909 0.00 0.00 38.85 3.91
1866 3886 5.759506 AATTCACCGTAATGTCAAACACA 57.240 34.783 0.00 0.00 40.18 3.72
1894 3914 1.468985 CGGCCCAACCAAATGATACA 58.531 50.000 0.00 0.00 39.03 2.29
1916 3936 4.844884 AGGCAAGAACCCAAGTATCTAAC 58.155 43.478 0.00 0.00 0.00 2.34
1941 3961 2.880890 GCAGCTTGGTTCAGAGAAAAGA 59.119 45.455 0.00 0.00 0.00 2.52
1990 4010 9.469807 CCAATGACTATACTCTCATCAACTTAC 57.530 37.037 0.00 0.00 0.00 2.34
2073 4093 8.472683 TTTGGTTGTTGTTCTATGTTTTTCTG 57.527 30.769 0.00 0.00 0.00 3.02
2170 4190 5.924825 GTCACGAACTAGAACCATTAGTTGT 59.075 40.000 0.00 0.30 40.46 3.32
2186 4206 2.248431 GCAACTGGCGTCACGAAC 59.752 61.111 0.00 0.00 0.00 3.95
2204 4224 2.154462 CAGGCAAACCCAGTCTAGTTG 58.846 52.381 0.00 0.00 36.11 3.16
2215 4235 1.878953 TCTCGACTTTCAGGCAAACC 58.121 50.000 0.00 0.00 0.00 3.27
2228 4248 6.508721 GCATAAAGCTATTGACAGTTCTCGAC 60.509 42.308 0.00 0.00 41.15 4.20
2585 4605 5.351465 AGTTCAGTAAATGCTAACACCATCG 59.649 40.000 0.00 0.00 0.00 3.84
3083 5112 7.071572 TCAATATCTCTTCTGAATCCCATGTCA 59.928 37.037 0.00 0.00 0.00 3.58
3086 5115 8.687292 TTTCAATATCTCTTCTGAATCCCATG 57.313 34.615 0.00 0.00 0.00 3.66
3251 5285 5.468409 TCATTGCTACGTGAGAAATTTGACA 59.532 36.000 0.00 0.00 29.91 3.58
3555 5606 7.494952 GGGTAATGAGTTAAGGAGACACAATAC 59.505 40.741 0.00 0.00 0.00 1.89
3766 5890 0.038166 AATCAACACCACGGGCAGAT 59.962 50.000 0.00 0.00 0.00 2.90
3846 5971 6.923199 TCTATGAGGAATGTGCATGAGATA 57.077 37.500 0.00 0.00 0.00 1.98
3855 5984 9.976511 ATGCAAATAAATTCTATGAGGAATGTG 57.023 29.630 0.00 0.00 36.24 3.21
3885 6014 1.284785 CCAGCAGGAATCCCAACCTTA 59.715 52.381 0.00 0.00 36.89 2.69
3993 6122 4.215399 TCTTTCACGCTGGTAAGAAAATGG 59.785 41.667 0.00 0.00 30.49 3.16
4023 6152 0.528684 GCGTCACAGCCTCTGATACC 60.529 60.000 0.29 0.00 35.18 2.73
4041 6170 2.555757 AGTGCTTGAATCAACTGAAGGC 59.444 45.455 0.00 0.00 0.00 4.35
4105 6259 6.496338 AGCTACACAACTAATAAACCTTGC 57.504 37.500 0.00 0.00 0.00 4.01
4106 6260 6.367969 ACGAGCTACACAACTAATAAACCTTG 59.632 38.462 0.00 0.00 0.00 3.61
4107 6261 6.461640 ACGAGCTACACAACTAATAAACCTT 58.538 36.000 0.00 0.00 0.00 3.50
4117 6273 2.470821 GACACAACGAGCTACACAACT 58.529 47.619 0.00 0.00 0.00 3.16
4161 6317 3.377346 AATAGTAGTCCATCGCTGCTG 57.623 47.619 0.00 0.00 31.60 4.41
4177 6333 5.556382 CGACGGTTAAATGCACAGCTAATAG 60.556 44.000 0.00 0.00 0.00 1.73
4201 6357 7.308435 CACCTTTCACCTGTCATAAGAAAATC 58.692 38.462 0.00 0.00 0.00 2.17
4321 6801 1.199327 TCGCCGAGAGTAACAAGTCTG 59.801 52.381 0.00 0.00 0.00 3.51
4463 6943 2.168106 CTCTAGCACATGAGTCCTGCTT 59.832 50.000 12.39 0.00 41.52 3.91
4464 6944 1.755959 CTCTAGCACATGAGTCCTGCT 59.244 52.381 11.90 11.90 43.67 4.24
4493 6975 2.123121 TGCATTGTGGTTGGCCCA 60.123 55.556 0.00 0.00 42.51 5.36
4608 7126 0.035152 TACAGTGGCCATGCTGGAAG 60.035 55.000 23.26 3.19 40.96 3.46
4653 7171 3.610911 AGCATACCAGCACTAAAGAACC 58.389 45.455 0.00 0.00 36.85 3.62
4654 7172 6.737254 TTTAGCATACCAGCACTAAAGAAC 57.263 37.500 0.00 0.00 36.85 3.01
4668 7186 4.873827 TGAACCGGTCAAGATTTAGCATAC 59.126 41.667 8.04 0.00 31.51 2.39
4674 7192 5.188163 TGGATAGTGAACCGGTCAAGATTTA 59.812 40.000 8.04 0.00 38.23 1.40
4737 7256 5.066634 TGAATCGTTTGGTCTGTTGCTTTAA 59.933 36.000 0.00 0.00 0.00 1.52
4783 7303 8.125978 AGCAATACATTTCTGAAAAAGGATCA 57.874 30.769 6.95 0.00 0.00 2.92
4833 7353 2.159382 AGCGACATGGGTTTGTTAAGG 58.841 47.619 0.00 0.00 0.00 2.69
4907 7431 6.183360 CGATACATCACATTAATCTGCCCATC 60.183 42.308 0.00 0.00 0.00 3.51
4992 7516 8.658499 AACTAGTTGTCTTAGATTTGTCGTTT 57.342 30.769 7.48 0.00 0.00 3.60
4993 7517 7.114529 CGAACTAGTTGTCTTAGATTTGTCGTT 59.885 37.037 14.14 0.00 0.00 3.85
4995 7519 6.452611 GCGAACTAGTTGTCTTAGATTTGTCG 60.453 42.308 14.14 6.17 0.00 4.35
5020 7567 1.717645 CGTTTTGTACTTCCTCCGTCG 59.282 52.381 0.00 0.00 0.00 5.12
5040 7587 5.318630 TCCAAACAGGGTGTAAGGAAATAC 58.681 41.667 0.00 0.00 38.24 1.89
5065 7612 7.064229 ACACCCCATTCTCTTTTTAACACTAA 58.936 34.615 0.00 0.00 0.00 2.24
5069 7616 5.452636 GCAACACCCCATTCTCTTTTTAACA 60.453 40.000 0.00 0.00 0.00 2.41
5072 7619 4.479158 AGCAACACCCCATTCTCTTTTTA 58.521 39.130 0.00 0.00 0.00 1.52
5078 7625 3.763897 ACATTAAGCAACACCCCATTCTC 59.236 43.478 0.00 0.00 0.00 2.87
5079 7626 3.763897 GACATTAAGCAACACCCCATTCT 59.236 43.478 0.00 0.00 0.00 2.40
5080 7627 3.763897 AGACATTAAGCAACACCCCATTC 59.236 43.478 0.00 0.00 0.00 2.67
5081 7628 3.511146 CAGACATTAAGCAACACCCCATT 59.489 43.478 0.00 0.00 0.00 3.16
5082 7629 3.091545 CAGACATTAAGCAACACCCCAT 58.908 45.455 0.00 0.00 0.00 4.00
5083 7630 2.513753 CAGACATTAAGCAACACCCCA 58.486 47.619 0.00 0.00 0.00 4.96
5084 7631 1.818674 CCAGACATTAAGCAACACCCC 59.181 52.381 0.00 0.00 0.00 4.95
5085 7632 1.202348 GCCAGACATTAAGCAACACCC 59.798 52.381 0.00 0.00 0.00 4.61
5086 7633 2.162681 AGCCAGACATTAAGCAACACC 58.837 47.619 0.00 0.00 0.00 4.16
5087 7634 3.568538 CAAGCCAGACATTAAGCAACAC 58.431 45.455 0.00 0.00 0.00 3.32
5088 7635 2.030007 GCAAGCCAGACATTAAGCAACA 60.030 45.455 0.00 0.00 0.00 3.33
5089 7636 2.229784 AGCAAGCCAGACATTAAGCAAC 59.770 45.455 0.00 0.00 0.00 4.17
5090 7637 2.517959 AGCAAGCCAGACATTAAGCAA 58.482 42.857 0.00 0.00 0.00 3.91
5091 7638 2.205022 AGCAAGCCAGACATTAAGCA 57.795 45.000 0.00 0.00 0.00 3.91
5092 7639 4.701956 TTAAGCAAGCCAGACATTAAGC 57.298 40.909 0.00 0.00 0.00 3.09
5093 7640 6.035327 GCATTTTAAGCAAGCCAGACATTAAG 59.965 38.462 0.00 0.00 0.00 1.85
5094 7641 5.868801 GCATTTTAAGCAAGCCAGACATTAA 59.131 36.000 0.00 0.00 0.00 1.40
5095 7642 5.185635 AGCATTTTAAGCAAGCCAGACATTA 59.814 36.000 0.00 0.00 0.00 1.90
5096 7643 4.020839 AGCATTTTAAGCAAGCCAGACATT 60.021 37.500 0.00 0.00 0.00 2.71
5097 7644 3.512724 AGCATTTTAAGCAAGCCAGACAT 59.487 39.130 0.00 0.00 0.00 3.06
5098 7645 2.892852 AGCATTTTAAGCAAGCCAGACA 59.107 40.909 0.00 0.00 0.00 3.41
5099 7646 3.582714 AGCATTTTAAGCAAGCCAGAC 57.417 42.857 0.00 0.00 0.00 3.51
5100 7647 4.766891 ACTAAGCATTTTAAGCAAGCCAGA 59.233 37.500 0.00 0.00 0.00 3.86
5101 7648 5.064441 ACTAAGCATTTTAAGCAAGCCAG 57.936 39.130 0.00 0.00 0.00 4.85
5102 7649 4.522405 TGACTAAGCATTTTAAGCAAGCCA 59.478 37.500 0.00 0.00 0.00 4.75
5103 7650 5.059404 TGACTAAGCATTTTAAGCAAGCC 57.941 39.130 0.00 0.00 0.00 4.35
5104 7651 7.096312 GCATATGACTAAGCATTTTAAGCAAGC 60.096 37.037 6.97 0.00 0.00 4.01
5105 7652 8.133627 AGCATATGACTAAGCATTTTAAGCAAG 58.866 33.333 6.97 0.00 0.00 4.01
5106 7653 7.999679 AGCATATGACTAAGCATTTTAAGCAA 58.000 30.769 6.97 0.00 0.00 3.91
5107 7654 7.255242 GGAGCATATGACTAAGCATTTTAAGCA 60.255 37.037 6.97 0.00 0.00 3.91
5108 7655 7.080724 GGAGCATATGACTAAGCATTTTAAGC 58.919 38.462 6.97 0.00 0.00 3.09
5109 7656 8.158169 TGGAGCATATGACTAAGCATTTTAAG 57.842 34.615 6.97 0.00 0.00 1.85
5110 7657 8.518430 TTGGAGCATATGACTAAGCATTTTAA 57.482 30.769 6.97 0.00 0.00 1.52
5111 7658 8.518430 TTTGGAGCATATGACTAAGCATTTTA 57.482 30.769 6.97 0.00 0.00 1.52
5112 7659 7.408756 TTTGGAGCATATGACTAAGCATTTT 57.591 32.000 6.97 0.00 0.00 1.82
5113 7660 7.408756 TTTTGGAGCATATGACTAAGCATTT 57.591 32.000 6.97 0.00 0.00 2.32
5114 7661 7.035840 CTTTTGGAGCATATGACTAAGCATT 57.964 36.000 6.97 0.00 0.00 3.56
5115 7662 6.630444 CTTTTGGAGCATATGACTAAGCAT 57.370 37.500 6.97 0.00 0.00 3.79
5129 7676 6.979307 AAAGTGGTTGAACGCTTTTGGAGC 62.979 45.833 9.59 0.00 45.87 4.70
5130 7677 1.676006 AGTGGTTGAACGCTTTTGGAG 59.324 47.619 0.00 0.00 0.00 3.86
5131 7678 1.757682 AGTGGTTGAACGCTTTTGGA 58.242 45.000 0.00 0.00 0.00 3.53
5132 7679 2.577449 AAGTGGTTGAACGCTTTTGG 57.423 45.000 0.00 0.00 37.93 3.28
5136 7683 2.639065 TGAGAAAGTGGTTGAACGCTT 58.361 42.857 0.00 0.00 42.56 4.68
5137 7684 2.325583 TGAGAAAGTGGTTGAACGCT 57.674 45.000 0.00 0.00 0.00 5.07
5138 7685 3.626028 AATGAGAAAGTGGTTGAACGC 57.374 42.857 0.00 0.00 0.00 4.84
5139 7686 5.455525 GTGAAAATGAGAAAGTGGTTGAACG 59.544 40.000 0.00 0.00 0.00 3.95
5140 7687 6.329496 TGTGAAAATGAGAAAGTGGTTGAAC 58.671 36.000 0.00 0.00 0.00 3.18
5141 7688 6.522625 TGTGAAAATGAGAAAGTGGTTGAA 57.477 33.333 0.00 0.00 0.00 2.69
5142 7689 6.096705 ACATGTGAAAATGAGAAAGTGGTTGA 59.903 34.615 0.00 0.00 0.00 3.18
5143 7690 6.199531 CACATGTGAAAATGAGAAAGTGGTTG 59.800 38.462 21.64 0.00 0.00 3.77
5144 7691 6.127366 ACACATGTGAAAATGAGAAAGTGGTT 60.127 34.615 31.94 0.00 0.00 3.67
5145 7692 5.360714 ACACATGTGAAAATGAGAAAGTGGT 59.639 36.000 31.94 0.06 0.00 4.16
5146 7693 5.835257 ACACATGTGAAAATGAGAAAGTGG 58.165 37.500 31.94 0.00 0.00 4.00
5147 7694 5.916883 GGACACATGTGAAAATGAGAAAGTG 59.083 40.000 31.94 0.00 0.00 3.16
5148 7695 5.010012 GGGACACATGTGAAAATGAGAAAGT 59.990 40.000 31.94 4.57 0.00 2.66
5149 7696 5.009911 TGGGACACATGTGAAAATGAGAAAG 59.990 40.000 31.94 0.88 0.00 2.62
5150 7697 4.892345 TGGGACACATGTGAAAATGAGAAA 59.108 37.500 31.94 3.63 0.00 2.52
5151 7698 4.468713 TGGGACACATGTGAAAATGAGAA 58.531 39.130 31.94 4.90 0.00 2.87
5152 7699 4.097551 TGGGACACATGTGAAAATGAGA 57.902 40.909 31.94 4.67 0.00 3.27
5153 7700 4.852134 TTGGGACACATGTGAAAATGAG 57.148 40.909 31.94 3.25 39.29 2.90
5154 7701 4.202202 GGTTTGGGACACATGTGAAAATGA 60.202 41.667 31.94 10.69 39.29 2.57
5155 7702 4.057432 GGTTTGGGACACATGTGAAAATG 58.943 43.478 31.94 4.93 39.29 2.32
5156 7703 3.708631 TGGTTTGGGACACATGTGAAAAT 59.291 39.130 31.94 9.80 39.29 1.82
5157 7704 3.099905 TGGTTTGGGACACATGTGAAAA 58.900 40.909 31.94 20.56 39.29 2.29
5158 7705 2.739943 TGGTTTGGGACACATGTGAAA 58.260 42.857 31.94 18.11 39.29 2.69
5159 7706 2.443958 TGGTTTGGGACACATGTGAA 57.556 45.000 31.94 13.02 39.29 3.18
5160 7707 2.443958 TTGGTTTGGGACACATGTGA 57.556 45.000 31.94 6.87 39.29 3.58
5161 7708 3.118811 ACTTTTGGTTTGGGACACATGTG 60.119 43.478 24.25 24.25 39.29 3.21
5162 7709 3.103742 ACTTTTGGTTTGGGACACATGT 58.896 40.909 0.00 0.00 39.29 3.21
5163 7710 3.131933 TGACTTTTGGTTTGGGACACATG 59.868 43.478 0.00 0.00 39.29 3.21
5164 7711 3.370104 TGACTTTTGGTTTGGGACACAT 58.630 40.909 0.00 0.00 39.29 3.21
5165 7712 2.808919 TGACTTTTGGTTTGGGACACA 58.191 42.857 0.00 0.00 39.29 3.72
5166 7713 3.878160 TTGACTTTTGGTTTGGGACAC 57.122 42.857 0.00 0.00 39.29 3.67
5167 7714 3.835395 AGTTTGACTTTTGGTTTGGGACA 59.165 39.130 0.00 0.00 0.00 4.02
5168 7715 4.465632 AGTTTGACTTTTGGTTTGGGAC 57.534 40.909 0.00 0.00 0.00 4.46
5169 7716 4.323104 CCAAGTTTGACTTTTGGTTTGGGA 60.323 41.667 0.00 0.00 36.03 4.37
5170 7717 3.938334 CCAAGTTTGACTTTTGGTTTGGG 59.062 43.478 0.00 0.00 36.03 4.12
5176 7723 5.778161 GTGAAACCAAGTTTGACTTTTGG 57.222 39.130 3.06 1.18 45.37 3.28
5192 7739 4.211374 CCGGATAGATCAAATCGGTGAAAC 59.789 45.833 0.00 0.00 0.00 2.78
5193 7740 4.141801 ACCGGATAGATCAAATCGGTGAAA 60.142 41.667 9.46 0.00 32.67 2.69
5194 7741 3.386726 ACCGGATAGATCAAATCGGTGAA 59.613 43.478 9.46 0.00 32.67 3.18
5195 7742 2.963101 ACCGGATAGATCAAATCGGTGA 59.037 45.455 9.46 0.00 32.67 4.02
5196 7743 3.059884 CACCGGATAGATCAAATCGGTG 58.940 50.000 24.88 24.88 39.39 4.94
5197 7744 2.548067 GCACCGGATAGATCAAATCGGT 60.548 50.000 9.46 14.49 33.49 4.69
5198 7745 2.069273 GCACCGGATAGATCAAATCGG 58.931 52.381 9.46 13.45 0.00 4.18
5199 7746 2.069273 GGCACCGGATAGATCAAATCG 58.931 52.381 9.46 0.00 0.00 3.34
5200 7747 2.808543 GTGGCACCGGATAGATCAAATC 59.191 50.000 9.46 0.00 0.00 2.17
5201 7748 2.487265 GGTGGCACCGGATAGATCAAAT 60.487 50.000 22.83 0.00 0.00 2.32
5202 7749 1.134220 GGTGGCACCGGATAGATCAAA 60.134 52.381 22.83 0.00 0.00 2.69
5203 7750 0.468226 GGTGGCACCGGATAGATCAA 59.532 55.000 22.83 0.00 0.00 2.57
5204 7751 2.133195 GGTGGCACCGGATAGATCA 58.867 57.895 22.83 0.00 0.00 2.92
5214 7761 0.240945 CAAATGAACTCGGTGGCACC 59.759 55.000 26.95 26.95 34.05 5.01
5215 7762 1.069227 GTCAAATGAACTCGGTGGCAC 60.069 52.381 9.70 9.70 0.00 5.01
5216 7763 1.234821 GTCAAATGAACTCGGTGGCA 58.765 50.000 0.00 0.00 0.00 4.92
5217 7764 1.234821 TGTCAAATGAACTCGGTGGC 58.765 50.000 0.00 0.00 0.00 5.01
5218 7765 4.253685 ACTATGTCAAATGAACTCGGTGG 58.746 43.478 0.00 0.00 0.00 4.61
5219 7766 4.929211 TGACTATGTCAAATGAACTCGGTG 59.071 41.667 0.00 0.00 39.78 4.94
5220 7767 5.147330 TGACTATGTCAAATGAACTCGGT 57.853 39.130 0.00 0.00 39.78 4.69
5221 7768 7.168302 GTCTATGACTATGTCAAATGAACTCGG 59.832 40.741 4.46 0.00 45.96 4.63
5222 7769 7.702348 TGTCTATGACTATGTCAAATGAACTCG 59.298 37.037 4.46 0.00 45.96 4.18
5223 7770 8.932945 TGTCTATGACTATGTCAAATGAACTC 57.067 34.615 4.46 0.00 45.96 3.01
5224 7771 8.753133 TCTGTCTATGACTATGTCAAATGAACT 58.247 33.333 4.46 0.00 45.96 3.01
5225 7772 8.932945 TCTGTCTATGACTATGTCAAATGAAC 57.067 34.615 4.46 1.27 45.96 3.18
5226 7773 9.942850 TTTCTGTCTATGACTATGTCAAATGAA 57.057 29.630 4.46 2.51 45.96 2.57
5227 7774 9.371136 GTTTCTGTCTATGACTATGTCAAATGA 57.629 33.333 4.46 1.59 45.96 2.57
5228 7775 8.607459 GGTTTCTGTCTATGACTATGTCAAATG 58.393 37.037 4.46 0.00 45.96 2.32
5229 7776 7.770897 GGGTTTCTGTCTATGACTATGTCAAAT 59.229 37.037 4.46 0.00 45.96 2.32
5230 7777 7.038302 AGGGTTTCTGTCTATGACTATGTCAAA 60.038 37.037 4.46 0.00 45.96 2.69
5231 7778 6.440647 AGGGTTTCTGTCTATGACTATGTCAA 59.559 38.462 4.46 0.00 45.96 3.18
5232 7779 5.958380 AGGGTTTCTGTCTATGACTATGTCA 59.042 40.000 2.77 2.77 46.90 3.58
5233 7780 6.472686 AGGGTTTCTGTCTATGACTATGTC 57.527 41.667 0.00 0.00 33.15 3.06
5234 7781 7.973048 TTAGGGTTTCTGTCTATGACTATGT 57.027 36.000 0.00 0.00 33.15 2.29
5235 7782 8.642432 TGATTAGGGTTTCTGTCTATGACTATG 58.358 37.037 0.00 0.00 33.15 2.23
5236 7783 8.783660 TGATTAGGGTTTCTGTCTATGACTAT 57.216 34.615 0.00 0.00 33.15 2.12
5237 7784 8.783660 ATGATTAGGGTTTCTGTCTATGACTA 57.216 34.615 0.00 0.00 33.15 2.59
5238 7785 7.682787 ATGATTAGGGTTTCTGTCTATGACT 57.317 36.000 0.00 0.00 33.15 3.41
5239 7786 8.738645 AAATGATTAGGGTTTCTGTCTATGAC 57.261 34.615 0.00 0.00 0.00 3.06
5240 7787 7.710907 CGAAATGATTAGGGTTTCTGTCTATGA 59.289 37.037 0.00 0.00 31.42 2.15
5241 7788 7.041780 CCGAAATGATTAGGGTTTCTGTCTATG 60.042 40.741 0.00 0.00 31.42 2.23
5242 7789 6.992715 CCGAAATGATTAGGGTTTCTGTCTAT 59.007 38.462 0.00 0.00 31.42 1.98
5243 7790 6.070424 ACCGAAATGATTAGGGTTTCTGTCTA 60.070 38.462 4.93 0.00 35.77 2.59
5244 7791 5.186198 CCGAAATGATTAGGGTTTCTGTCT 58.814 41.667 0.00 0.00 31.42 3.41
5245 7792 4.941873 ACCGAAATGATTAGGGTTTCTGTC 59.058 41.667 4.93 0.00 35.77 3.51
5246 7793 4.918588 ACCGAAATGATTAGGGTTTCTGT 58.081 39.130 4.93 0.00 35.77 3.41
5247 7794 5.186198 AGACCGAAATGATTAGGGTTTCTG 58.814 41.667 2.20 0.00 35.77 3.02
5248 7795 5.045869 TGAGACCGAAATGATTAGGGTTTCT 60.046 40.000 14.71 5.72 35.77 2.52
5249 7796 5.064834 GTGAGACCGAAATGATTAGGGTTTC 59.935 44.000 9.67 9.67 35.77 2.78
5250 7797 4.941873 GTGAGACCGAAATGATTAGGGTTT 59.058 41.667 2.20 0.00 35.77 3.27
5251 7798 4.514401 GTGAGACCGAAATGATTAGGGTT 58.486 43.478 2.20 0.00 35.77 4.11
5252 7799 3.118371 GGTGAGACCGAAATGATTAGGGT 60.118 47.826 0.30 0.30 35.77 4.34
5253 7800 3.467803 GGTGAGACCGAAATGATTAGGG 58.532 50.000 4.93 0.00 35.77 3.53
5266 7813 2.164338 GAGATCCCTATCGGTGAGACC 58.836 57.143 0.00 0.00 37.19 3.85
5267 7814 1.807742 CGAGATCCCTATCGGTGAGAC 59.192 57.143 0.00 0.00 37.19 3.36
5268 7815 2.186532 CGAGATCCCTATCGGTGAGA 57.813 55.000 0.00 0.00 37.19 3.27
5274 7821 1.807742 GTGAGACCGAGATCCCTATCG 59.192 57.143 0.00 0.00 37.19 2.92
5275 7822 2.164338 GGTGAGACCGAGATCCCTATC 58.836 57.143 0.00 0.00 0.00 2.08
5276 7823 2.296073 GGTGAGACCGAGATCCCTAT 57.704 55.000 0.00 0.00 0.00 2.57
5277 7824 3.823369 GGTGAGACCGAGATCCCTA 57.177 57.895 0.00 0.00 0.00 3.53
5278 7825 4.688770 GGTGAGACCGAGATCCCT 57.311 61.111 0.00 0.00 0.00 4.20
5287 7834 1.123928 AATCCCATCTCGGTGAGACC 58.876 55.000 0.00 0.00 41.76 3.85
5288 7835 1.808133 GCAATCCCATCTCGGTGAGAC 60.808 57.143 0.00 0.00 41.76 3.36
5289 7836 0.465705 GCAATCCCATCTCGGTGAGA 59.534 55.000 0.00 0.00 43.20 3.27
5290 7837 0.178767 TGCAATCCCATCTCGGTGAG 59.821 55.000 0.00 0.00 0.00 3.51
5291 7838 0.617935 TTGCAATCCCATCTCGGTGA 59.382 50.000 0.00 0.00 0.00 4.02
5292 7839 1.133025 GTTTGCAATCCCATCTCGGTG 59.867 52.381 0.00 0.00 0.00 4.94
5293 7840 1.004745 AGTTTGCAATCCCATCTCGGT 59.995 47.619 0.00 0.00 0.00 4.69
5294 7841 1.672881 GAGTTTGCAATCCCATCTCGG 59.327 52.381 0.00 0.00 0.00 4.63
5295 7842 2.611292 GAGAGTTTGCAATCCCATCTCG 59.389 50.000 0.00 0.00 0.00 4.04
5296 7843 3.626670 CAGAGAGTTTGCAATCCCATCTC 59.373 47.826 0.00 8.38 33.51 2.75
5297 7844 3.009916 ACAGAGAGTTTGCAATCCCATCT 59.990 43.478 0.00 0.00 0.00 2.90
5298 7845 3.350833 ACAGAGAGTTTGCAATCCCATC 58.649 45.455 0.00 0.00 0.00 3.51
5299 7846 3.446442 ACAGAGAGTTTGCAATCCCAT 57.554 42.857 0.00 0.00 0.00 4.00
5300 7847 2.957402 ACAGAGAGTTTGCAATCCCA 57.043 45.000 0.00 0.00 0.00 4.37
5310 7857 4.629092 GTTACGAAGGGAAACAGAGAGTT 58.371 43.478 0.00 0.00 43.89 3.01
5311 7858 3.305199 CGTTACGAAGGGAAACAGAGAGT 60.305 47.826 0.00 0.00 0.00 3.24
5312 7859 3.243336 CGTTACGAAGGGAAACAGAGAG 58.757 50.000 0.00 0.00 0.00 3.20
5313 7860 2.624838 ACGTTACGAAGGGAAACAGAGA 59.375 45.455 13.03 0.00 0.00 3.10
5314 7861 3.022607 ACGTTACGAAGGGAAACAGAG 57.977 47.619 13.03 0.00 0.00 3.35
5315 7862 3.457610 AACGTTACGAAGGGAAACAGA 57.542 42.857 13.03 0.00 0.00 3.41
5316 7863 3.556775 TGAAACGTTACGAAGGGAAACAG 59.443 43.478 13.03 0.00 0.00 3.16
5317 7864 3.529533 TGAAACGTTACGAAGGGAAACA 58.470 40.909 13.03 0.00 0.00 2.83
5318 7865 3.557185 ACTGAAACGTTACGAAGGGAAAC 59.443 43.478 13.03 0.00 0.00 2.78
5319 7866 3.795877 ACTGAAACGTTACGAAGGGAAA 58.204 40.909 13.03 0.00 0.00 3.13
5320 7867 3.068590 AGACTGAAACGTTACGAAGGGAA 59.931 43.478 13.03 0.00 0.00 3.97
5321 7868 2.624838 AGACTGAAACGTTACGAAGGGA 59.375 45.455 13.03 0.00 0.00 4.20
5322 7869 3.022607 AGACTGAAACGTTACGAAGGG 57.977 47.619 13.03 0.08 0.00 3.95
5323 7870 4.383948 GGTTAGACTGAAACGTTACGAAGG 59.616 45.833 13.03 0.00 0.00 3.46
5324 7871 4.087648 CGGTTAGACTGAAACGTTACGAAG 59.912 45.833 13.03 5.91 34.78 3.79
5325 7872 3.974401 CGGTTAGACTGAAACGTTACGAA 59.026 43.478 13.03 0.00 34.78 3.85
5326 7873 3.249799 TCGGTTAGACTGAAACGTTACGA 59.750 43.478 13.03 0.00 40.45 3.43
5327 7874 3.554524 TCGGTTAGACTGAAACGTTACG 58.445 45.455 0.00 2.19 40.45 3.18
5328 7875 4.787598 TCTCGGTTAGACTGAAACGTTAC 58.212 43.478 0.00 0.00 40.45 2.50
5329 7876 5.181811 TCATCTCGGTTAGACTGAAACGTTA 59.818 40.000 0.00 0.00 40.45 3.18
5330 7877 3.996150 TCTCGGTTAGACTGAAACGTT 57.004 42.857 0.00 0.00 40.45 3.99
5331 7878 3.504906 TCATCTCGGTTAGACTGAAACGT 59.495 43.478 0.00 0.00 40.45 3.99
5332 7879 4.092771 TCATCTCGGTTAGACTGAAACG 57.907 45.455 0.00 0.00 40.94 3.60
5333 7880 3.860536 GCTCATCTCGGTTAGACTGAAAC 59.139 47.826 0.00 0.00 36.93 2.78
5334 7881 3.427638 CGCTCATCTCGGTTAGACTGAAA 60.428 47.826 0.00 0.00 36.93 2.69
5335 7882 2.097629 CGCTCATCTCGGTTAGACTGAA 59.902 50.000 0.00 0.00 36.93 3.02
5336 7883 1.671328 CGCTCATCTCGGTTAGACTGA 59.329 52.381 0.00 0.00 36.93 3.41
5337 7884 1.671328 TCGCTCATCTCGGTTAGACTG 59.329 52.381 0.00 0.00 36.93 3.51
5338 7885 2.039818 TCGCTCATCTCGGTTAGACT 57.960 50.000 0.00 0.00 36.93 3.24
5339 7886 2.663334 CGATCGCTCATCTCGGTTAGAC 60.663 54.545 0.26 0.00 36.93 2.59
5340 7887 1.531578 CGATCGCTCATCTCGGTTAGA 59.468 52.381 0.26 0.00 39.02 2.10
5341 7888 1.400371 CCGATCGCTCATCTCGGTTAG 60.400 57.143 10.32 0.00 45.30 2.34
5342 7889 0.591659 CCGATCGCTCATCTCGGTTA 59.408 55.000 10.32 0.00 45.30 2.85
5343 7890 1.360551 CCGATCGCTCATCTCGGTT 59.639 57.895 10.32 0.00 45.30 4.44
5344 7891 3.034878 CCGATCGCTCATCTCGGT 58.965 61.111 10.32 0.00 45.30 4.69
5346 7893 1.081774 GGACCGATCGCTCATCTCG 60.082 63.158 10.32 0.00 0.00 4.04
5347 7894 1.287503 GGGACCGATCGCTCATCTC 59.712 63.158 10.32 0.12 34.96 2.75
5348 7895 1.455773 TGGGACCGATCGCTCATCT 60.456 57.895 10.32 0.00 38.59 2.90
5349 7896 1.300233 GTGGGACCGATCGCTCATC 60.300 63.158 10.32 4.04 38.59 2.92
5350 7897 2.797278 GGTGGGACCGATCGCTCAT 61.797 63.158 10.32 0.00 38.59 2.90
5351 7898 3.458163 GGTGGGACCGATCGCTCA 61.458 66.667 10.32 0.00 38.59 4.26
5360 7907 2.798148 ATTGCGAACTCGGTGGGACC 62.798 60.000 0.69 0.00 40.23 4.46
5361 7908 1.375523 ATTGCGAACTCGGTGGGAC 60.376 57.895 0.69 0.00 40.23 4.46
5362 7909 1.375396 CATTGCGAACTCGGTGGGA 60.375 57.895 0.69 0.00 40.23 4.37
5363 7910 3.039202 GCATTGCGAACTCGGTGGG 62.039 63.158 0.69 0.00 40.23 4.61
5364 7911 1.851021 TTGCATTGCGAACTCGGTGG 61.851 55.000 3.84 0.00 40.23 4.61
5365 7912 0.040514 TTTGCATTGCGAACTCGGTG 60.041 50.000 7.24 0.00 40.23 4.94
5366 7913 0.040425 GTTTGCATTGCGAACTCGGT 60.040 50.000 27.30 0.00 46.14 4.69
5367 7914 2.712077 GTTTGCATTGCGAACTCGG 58.288 52.632 27.30 0.00 46.14 4.63
5372 7919 2.221169 ACAGAGAGTTTGCATTGCGAA 58.779 42.857 7.24 7.24 0.00 4.70
5373 7920 1.882912 ACAGAGAGTTTGCATTGCGA 58.117 45.000 3.84 0.00 0.00 5.10
5374 7921 2.693797 AACAGAGAGTTTGCATTGCG 57.306 45.000 3.84 0.00 37.03 4.85
5375 7922 5.966151 AAGGAAAACAGAGAGTTTGCATTGC 60.966 40.000 0.46 0.46 45.43 3.56
5376 7923 5.594926 AAGGAAAACAGAGAGTTTGCATTG 58.405 37.500 0.00 0.00 45.43 2.82
5383 7930 3.840124 ACGGAAGGAAAACAGAGAGTT 57.160 42.857 0.00 0.00 43.89 3.01
5384 7931 4.629092 GTTACGGAAGGAAAACAGAGAGT 58.371 43.478 0.00 0.00 34.29 3.24
5385 7932 3.673809 CGTTACGGAAGGAAAACAGAGAG 59.326 47.826 0.00 0.00 34.29 3.20
5386 7933 3.068590 ACGTTACGGAAGGAAAACAGAGA 59.931 43.478 10.20 0.00 34.29 3.10
5387 7934 3.387397 ACGTTACGGAAGGAAAACAGAG 58.613 45.455 10.20 0.00 34.29 3.35
5388 7935 3.457610 ACGTTACGGAAGGAAAACAGA 57.542 42.857 10.20 0.00 34.29 3.41
5389 7936 4.521010 GAAACGTTACGGAAGGAAAACAG 58.479 43.478 10.20 0.00 34.29 3.16
5390 7937 3.001127 CGAAACGTTACGGAAGGAAAACA 59.999 43.478 10.20 0.00 34.29 2.83
5391 7938 3.534889 CGAAACGTTACGGAAGGAAAAC 58.465 45.455 10.20 0.00 34.29 2.43
5392 7939 3.857923 CGAAACGTTACGGAAGGAAAA 57.142 42.857 10.20 0.00 34.29 2.29
5401 7948 1.576246 CGATGAGACCGAAACGTTACG 59.424 52.381 0.00 2.19 0.00 3.18
5402 7949 2.855180 TCGATGAGACCGAAACGTTAC 58.145 47.619 0.00 0.00 32.64 2.50
5403 7950 3.557577 TTCGATGAGACCGAAACGTTA 57.442 42.857 0.00 0.00 42.18 3.18
5404 7951 2.427232 TTCGATGAGACCGAAACGTT 57.573 45.000 0.00 0.00 42.18 3.99
5405 7952 2.427232 TTTCGATGAGACCGAAACGT 57.573 45.000 6.60 0.00 46.77 3.99
5412 7959 5.604514 CTGATCGCTCATTTCGATGAGACC 61.605 50.000 18.10 2.69 45.85 3.85
5413 7960 3.424861 CTGATCGCTCATTTCGATGAGAC 59.575 47.826 18.10 9.41 45.85 3.36
5414 7961 3.067320 ACTGATCGCTCATTTCGATGAGA 59.933 43.478 18.10 1.04 45.85 3.27
5416 7963 3.443099 ACTGATCGCTCATTTCGATGA 57.557 42.857 2.46 0.00 45.44 2.92
5417 7964 4.033243 TGAAACTGATCGCTCATTTCGATG 59.967 41.667 2.46 0.00 45.44 3.84
5419 7966 3.584834 TGAAACTGATCGCTCATTTCGA 58.415 40.909 13.98 0.00 40.45 3.71
5420 7967 3.997319 TGAAACTGATCGCTCATTTCG 57.003 42.857 13.98 0.00 34.78 3.46
5421 7968 5.475273 TGATGAAACTGATCGCTCATTTC 57.525 39.130 12.90 12.90 33.82 2.17
5422 7969 5.885230 TTGATGAAACTGATCGCTCATTT 57.115 34.783 0.00 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.