Multiple sequence alignment - TraesCS3A01G222200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G222200 chr3A 100.000 3172 0 0 1 3172 416041425 416044596 0.000000e+00 5858
1 TraesCS3A01G222200 chr3A 80.022 916 144 33 576 1479 104460061 104460949 2.670000e-180 641
2 TraesCS3A01G222200 chr1A 97.823 2710 57 2 1 2708 18495820 18493111 0.000000e+00 4676
3 TraesCS3A01G222200 chr1A 97.672 2706 52 3 1 2704 518796092 518793396 0.000000e+00 4638
4 TraesCS3A01G222200 chr6B 93.224 2745 136 19 1 2697 100716443 100719185 0.000000e+00 3993
5 TraesCS3A01G222200 chr6B 93.393 1453 72 13 1 1429 100751094 100752546 0.000000e+00 2130
6 TraesCS3A01G222200 chr6B 94.145 1281 67 7 1423 2697 100760932 100762210 0.000000e+00 1943
7 TraesCS3A01G222200 chr6B 84.056 922 117 23 1 911 485534721 485533819 0.000000e+00 861
8 TraesCS3A01G222200 chr3D 94.614 1931 76 16 1 1908 432089795 432091720 0.000000e+00 2964
9 TraesCS3A01G222200 chr3D 96.375 469 17 0 2704 3172 268467060 268467528 0.000000e+00 773
10 TraesCS3A01G222200 chr3D 96.375 469 17 0 2704 3172 385069691 385069223 0.000000e+00 773
11 TraesCS3A01G222200 chr3D 95.949 469 19 0 2704 3172 113271510 113271042 0.000000e+00 761
12 TraesCS3A01G222200 chr6D 94.223 1904 100 9 812 2707 156259401 156261302 0.000000e+00 2898
13 TraesCS3A01G222200 chr6D 92.328 1929 84 13 812 2704 156256446 156254546 0.000000e+00 2684
14 TraesCS3A01G222200 chr6D 96.802 469 15 0 2704 3172 309856766 309857234 0.000000e+00 784
15 TraesCS3A01G222200 chr6D 96.809 470 14 1 2704 3172 322861975 322862444 0.000000e+00 784
16 TraesCS3A01G222200 chr6D 96.375 469 17 0 2704 3172 173929998 173930466 0.000000e+00 773
17 TraesCS3A01G222200 chr6A 98.104 1582 28 2 1127 2706 607382809 607384390 0.000000e+00 2754
18 TraesCS3A01G222200 chr6A 97.832 738 16 0 394 1131 607379312 607380049 0.000000e+00 1275
19 TraesCS3A01G222200 chr4D 96.014 1154 43 3 1554 2705 304695349 304696501 0.000000e+00 1873
20 TraesCS3A01G222200 chr4D 95.225 356 13 4 1243 1596 304695008 304695361 7.680000e-156 560
21 TraesCS3A01G222200 chr2D 87.147 1595 163 21 1107 2691 579218877 579217315 0.000000e+00 1772
22 TraesCS3A01G222200 chr2D 84.056 922 117 23 1 911 642015992 642016894 0.000000e+00 861
23 TraesCS3A01G222200 chr5B 84.056 922 117 23 1 911 565833021 565833923 0.000000e+00 861
24 TraesCS3A01G222200 chr5B 84.056 922 117 23 1 911 565905625 565906527 0.000000e+00 861
25 TraesCS3A01G222200 chr5D 96.360 467 17 0 2706 3172 526374673 526374207 0.000000e+00 769
26 TraesCS3A01G222200 chr5D 96.162 469 18 0 2704 3172 385488292 385487824 0.000000e+00 767
27 TraesCS3A01G222200 chr1D 96.162 469 18 0 2704 3172 95465982 95466450 0.000000e+00 767
28 TraesCS3A01G222200 chr2A 88.372 215 22 3 2489 2703 294769012 294769223 4.060000e-64 255


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G222200 chr3A 416041425 416044596 3171 False 5858.0 5858 100.0000 1 3172 1 chr3A.!!$F2 3171
1 TraesCS3A01G222200 chr3A 104460061 104460949 888 False 641.0 641 80.0220 576 1479 1 chr3A.!!$F1 903
2 TraesCS3A01G222200 chr1A 18493111 18495820 2709 True 4676.0 4676 97.8230 1 2708 1 chr1A.!!$R1 2707
3 TraesCS3A01G222200 chr1A 518793396 518796092 2696 True 4638.0 4638 97.6720 1 2704 1 chr1A.!!$R2 2703
4 TraesCS3A01G222200 chr6B 100716443 100719185 2742 False 3993.0 3993 93.2240 1 2697 1 chr6B.!!$F1 2696
5 TraesCS3A01G222200 chr6B 100751094 100752546 1452 False 2130.0 2130 93.3930 1 1429 1 chr6B.!!$F2 1428
6 TraesCS3A01G222200 chr6B 100760932 100762210 1278 False 1943.0 1943 94.1450 1423 2697 1 chr6B.!!$F3 1274
7 TraesCS3A01G222200 chr6B 485533819 485534721 902 True 861.0 861 84.0560 1 911 1 chr6B.!!$R1 910
8 TraesCS3A01G222200 chr3D 432089795 432091720 1925 False 2964.0 2964 94.6140 1 1908 1 chr3D.!!$F2 1907
9 TraesCS3A01G222200 chr6D 156259401 156261302 1901 False 2898.0 2898 94.2230 812 2707 1 chr6D.!!$F1 1895
10 TraesCS3A01G222200 chr6D 156254546 156256446 1900 True 2684.0 2684 92.3280 812 2704 1 chr6D.!!$R1 1892
11 TraesCS3A01G222200 chr6A 607379312 607384390 5078 False 2014.5 2754 97.9680 394 2706 2 chr6A.!!$F1 2312
12 TraesCS3A01G222200 chr4D 304695008 304696501 1493 False 1216.5 1873 95.6195 1243 2705 2 chr4D.!!$F1 1462
13 TraesCS3A01G222200 chr2D 579217315 579218877 1562 True 1772.0 1772 87.1470 1107 2691 1 chr2D.!!$R1 1584
14 TraesCS3A01G222200 chr2D 642015992 642016894 902 False 861.0 861 84.0560 1 911 1 chr2D.!!$F1 910
15 TraesCS3A01G222200 chr5B 565833021 565833923 902 False 861.0 861 84.0560 1 911 1 chr5B.!!$F1 910
16 TraesCS3A01G222200 chr5B 565905625 565906527 902 False 861.0 861 84.0560 1 911 1 chr5B.!!$F2 910

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
988 1041 3.701205 TGGCTGCTAGACAAATCTCAA 57.299 42.857 0.0 0.0 36.29 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2771 5667 0.46729 GGTGGAACTGCACAAAGGGA 60.467 55.0 3.68 0.0 36.74 4.2 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 9.052759 CCACAAGGTAATAGATTAACCATGTAC 57.947 37.037 1.74 0.00 31.15 2.90
239 240 4.214310 TCCTGTGCAAAATGAAAAGGAGA 58.786 39.130 0.00 0.00 0.00 3.71
358 359 9.454859 CCATTCTTTCTTTATCCTACTCAAGTT 57.545 33.333 0.00 0.00 0.00 2.66
386 387 4.701765 TGTTGTGGCTTGTTGCATTATTT 58.298 34.783 0.00 0.00 45.15 1.40
866 915 9.507329 AATACTTACAGAATTGCTTCTTTCTCA 57.493 29.630 0.00 0.00 39.78 3.27
978 1031 6.043127 TGAAATTGTAGGATATGGCTGCTAGA 59.957 38.462 0.00 0.00 0.00 2.43
988 1041 3.701205 TGGCTGCTAGACAAATCTCAA 57.299 42.857 0.00 0.00 36.29 3.02
1036 1089 1.767759 AGCCCATCTATGTGGTTTGC 58.232 50.000 0.00 0.00 37.57 3.68
1068 1121 3.385115 CCATAGACCAGGTACCTCCTTT 58.615 50.000 12.84 2.22 45.67 3.11
1185 4004 4.694037 ACGTGGAAAAGGAAGTATAAGCAC 59.306 41.667 0.00 0.00 0.00 4.40
1479 4337 5.755409 TCCTTGCTGGAATGAGTACTTTA 57.245 39.130 0.00 0.00 42.94 1.85
1691 4581 4.823989 ACAAAGGACCACAAAGAAGATGAG 59.176 41.667 0.00 0.00 0.00 2.90
1830 4720 5.673337 TGATCTTGAAGAACAGAAAACCG 57.327 39.130 0.00 0.00 0.00 4.44
1840 4730 0.941542 CAGAAAACCGACAAAGCCGA 59.058 50.000 0.00 0.00 0.00 5.54
1995 4885 5.083533 TGTTGTTGCCATTGAGAAACTTT 57.916 34.783 0.00 0.00 0.00 2.66
2192 5083 5.047235 GTGAAGAGTACCTTTCCTGAAGCTA 60.047 44.000 0.00 0.00 34.68 3.32
2277 5170 3.149005 TGGGTTGTATGGACTTGTTCC 57.851 47.619 0.00 0.00 46.13 3.62
2481 5376 8.271458 TGGGTATGATTGCTTCTTTCTACAATA 58.729 33.333 0.00 0.00 33.07 1.90
2697 5593 3.611766 ACATCTCCCTCTAACCAAACG 57.388 47.619 0.00 0.00 0.00 3.60
2708 5604 6.053005 CCTCTAACCAAACGCATCCTAAATA 58.947 40.000 0.00 0.00 0.00 1.40
2709 5605 6.710744 CCTCTAACCAAACGCATCCTAAATAT 59.289 38.462 0.00 0.00 0.00 1.28
2710 5606 7.095187 CCTCTAACCAAACGCATCCTAAATATC 60.095 40.741 0.00 0.00 0.00 1.63
2711 5607 7.276658 TCTAACCAAACGCATCCTAAATATCA 58.723 34.615 0.00 0.00 0.00 2.15
2712 5608 6.959639 AACCAAACGCATCCTAAATATCAT 57.040 33.333 0.00 0.00 0.00 2.45
2713 5609 6.959639 ACCAAACGCATCCTAAATATCATT 57.040 33.333 0.00 0.00 0.00 2.57
2714 5610 6.970484 ACCAAACGCATCCTAAATATCATTC 58.030 36.000 0.00 0.00 0.00 2.67
2715 5611 6.772716 ACCAAACGCATCCTAAATATCATTCT 59.227 34.615 0.00 0.00 0.00 2.40
2716 5612 7.285401 ACCAAACGCATCCTAAATATCATTCTT 59.715 33.333 0.00 0.00 0.00 2.52
2717 5613 8.783093 CCAAACGCATCCTAAATATCATTCTTA 58.217 33.333 0.00 0.00 0.00 2.10
2718 5614 9.599322 CAAACGCATCCTAAATATCATTCTTAC 57.401 33.333 0.00 0.00 0.00 2.34
2719 5615 7.907214 ACGCATCCTAAATATCATTCTTACC 57.093 36.000 0.00 0.00 0.00 2.85
2720 5616 7.680730 ACGCATCCTAAATATCATTCTTACCT 58.319 34.615 0.00 0.00 0.00 3.08
2721 5617 8.812972 ACGCATCCTAAATATCATTCTTACCTA 58.187 33.333 0.00 0.00 0.00 3.08
2722 5618 9.653287 CGCATCCTAAATATCATTCTTACCTAA 57.347 33.333 0.00 0.00 0.00 2.69
2739 5635 3.288092 CCTAAAGGAAGGTTATGGTGCC 58.712 50.000 0.00 0.00 37.39 5.01
2740 5636 2.990740 AAAGGAAGGTTATGGTGCCA 57.009 45.000 0.00 0.00 0.00 4.92
2741 5637 2.990740 AAGGAAGGTTATGGTGCCAA 57.009 45.000 0.00 0.00 0.00 4.52
2742 5638 3.473113 AAGGAAGGTTATGGTGCCAAT 57.527 42.857 0.00 0.00 0.00 3.16
2743 5639 4.601406 AAGGAAGGTTATGGTGCCAATA 57.399 40.909 0.00 0.00 0.00 1.90
2744 5640 4.814224 AGGAAGGTTATGGTGCCAATAT 57.186 40.909 0.00 0.00 0.00 1.28
2745 5641 4.473444 AGGAAGGTTATGGTGCCAATATG 58.527 43.478 0.00 0.00 0.00 1.78
2746 5642 3.573967 GGAAGGTTATGGTGCCAATATGG 59.426 47.826 0.00 0.00 41.55 2.74
2747 5643 4.469657 GAAGGTTATGGTGCCAATATGGA 58.530 43.478 0.00 0.00 40.96 3.41
2748 5644 4.747265 AGGTTATGGTGCCAATATGGAT 57.253 40.909 0.00 0.00 40.96 3.41
2749 5645 4.410099 AGGTTATGGTGCCAATATGGATG 58.590 43.478 0.00 0.00 40.96 3.51
2750 5646 3.511146 GGTTATGGTGCCAATATGGATGG 59.489 47.826 0.00 0.00 40.96 3.51
2751 5647 4.151883 GTTATGGTGCCAATATGGATGGT 58.848 43.478 0.00 0.00 40.96 3.55
2752 5648 2.070305 TGGTGCCAATATGGATGGTG 57.930 50.000 0.00 0.00 40.96 4.17
2753 5649 1.568123 TGGTGCCAATATGGATGGTGA 59.432 47.619 0.00 0.00 40.96 4.02
2754 5650 2.233271 GGTGCCAATATGGATGGTGAG 58.767 52.381 0.00 0.00 40.96 3.51
2755 5651 2.233271 GTGCCAATATGGATGGTGAGG 58.767 52.381 0.00 0.00 40.96 3.86
2756 5652 2.134354 TGCCAATATGGATGGTGAGGA 58.866 47.619 0.00 0.00 40.96 3.71
2757 5653 2.718062 TGCCAATATGGATGGTGAGGAT 59.282 45.455 0.00 0.00 40.96 3.24
2758 5654 3.140707 TGCCAATATGGATGGTGAGGATT 59.859 43.478 0.00 0.00 40.96 3.01
2759 5655 3.508793 GCCAATATGGATGGTGAGGATTG 59.491 47.826 0.00 0.00 40.96 2.67
2760 5656 4.084287 CCAATATGGATGGTGAGGATTGG 58.916 47.826 0.00 0.00 40.96 3.16
2761 5657 4.202599 CCAATATGGATGGTGAGGATTGGA 60.203 45.833 5.03 0.00 42.88 3.53
2762 5658 5.387788 CAATATGGATGGTGAGGATTGGAA 58.612 41.667 0.00 0.00 0.00 3.53
2763 5659 2.806945 TGGATGGTGAGGATTGGAAC 57.193 50.000 0.00 0.00 0.00 3.62
2764 5660 1.991813 TGGATGGTGAGGATTGGAACA 59.008 47.619 0.00 0.00 0.00 3.18
2765 5661 2.290896 TGGATGGTGAGGATTGGAACAC 60.291 50.000 0.00 0.00 39.29 3.32
2766 5662 2.290896 GGATGGTGAGGATTGGAACACA 60.291 50.000 0.00 0.00 39.29 3.72
2767 5663 2.566833 TGGTGAGGATTGGAACACAG 57.433 50.000 0.00 0.00 39.29 3.66
2768 5664 2.054021 TGGTGAGGATTGGAACACAGA 58.946 47.619 0.00 0.00 39.29 3.41
2769 5665 2.644299 TGGTGAGGATTGGAACACAGAT 59.356 45.455 0.00 0.00 39.29 2.90
2770 5666 3.274288 GGTGAGGATTGGAACACAGATC 58.726 50.000 0.00 0.00 39.29 2.75
2771 5667 3.054802 GGTGAGGATTGGAACACAGATCT 60.055 47.826 0.00 0.00 39.29 2.75
2772 5668 4.187694 GTGAGGATTGGAACACAGATCTC 58.812 47.826 0.00 0.00 39.29 2.75
2773 5669 3.198635 TGAGGATTGGAACACAGATCTCC 59.801 47.826 0.00 0.00 39.29 3.71
2774 5670 2.507471 AGGATTGGAACACAGATCTCCC 59.493 50.000 0.00 0.00 39.29 4.30
2775 5671 2.507471 GGATTGGAACACAGATCTCCCT 59.493 50.000 0.00 0.00 39.29 4.20
2776 5672 3.054065 GGATTGGAACACAGATCTCCCTT 60.054 47.826 0.00 0.00 39.29 3.95
2777 5673 4.568592 GGATTGGAACACAGATCTCCCTTT 60.569 45.833 0.00 0.00 39.29 3.11
2778 5674 3.423539 TGGAACACAGATCTCCCTTTG 57.576 47.619 0.00 0.00 0.00 2.77
2779 5675 2.711009 TGGAACACAGATCTCCCTTTGT 59.289 45.455 0.00 0.00 0.00 2.83
2780 5676 3.077359 GGAACACAGATCTCCCTTTGTG 58.923 50.000 8.52 8.52 44.81 3.33
2781 5677 2.191128 ACACAGATCTCCCTTTGTGC 57.809 50.000 9.69 0.00 43.50 4.57
2782 5678 1.421268 ACACAGATCTCCCTTTGTGCA 59.579 47.619 9.69 0.00 43.50 4.57
2783 5679 2.082231 CACAGATCTCCCTTTGTGCAG 58.918 52.381 0.00 0.00 35.11 4.41
2784 5680 1.701847 ACAGATCTCCCTTTGTGCAGT 59.298 47.619 0.00 0.00 0.00 4.40
2785 5681 2.107204 ACAGATCTCCCTTTGTGCAGTT 59.893 45.455 0.00 0.00 0.00 3.16
2786 5682 2.746362 CAGATCTCCCTTTGTGCAGTTC 59.254 50.000 0.00 0.00 0.00 3.01
2787 5683 2.087646 GATCTCCCTTTGTGCAGTTCC 58.912 52.381 0.00 0.00 0.00 3.62
2788 5684 0.843309 TCTCCCTTTGTGCAGTTCCA 59.157 50.000 0.00 0.00 0.00 3.53
2789 5685 0.954452 CTCCCTTTGTGCAGTTCCAC 59.046 55.000 0.00 0.00 36.28 4.02
2790 5686 0.467290 TCCCTTTGTGCAGTTCCACC 60.467 55.000 0.00 0.00 34.85 4.61
2791 5687 1.654220 CCTTTGTGCAGTTCCACCG 59.346 57.895 0.00 0.00 34.85 4.94
2792 5688 0.817634 CCTTTGTGCAGTTCCACCGA 60.818 55.000 0.00 0.00 34.85 4.69
2793 5689 1.021202 CTTTGTGCAGTTCCACCGAA 58.979 50.000 0.00 0.00 34.85 4.30
2794 5690 1.403679 CTTTGTGCAGTTCCACCGAAA 59.596 47.619 0.00 0.00 34.85 3.46
2795 5691 1.686355 TTGTGCAGTTCCACCGAAAT 58.314 45.000 0.00 0.00 34.85 2.17
2796 5692 0.950836 TGTGCAGTTCCACCGAAATG 59.049 50.000 0.00 0.00 44.88 2.32
2797 5693 1.234821 GTGCAGTTCCACCGAAATGA 58.765 50.000 4.62 0.00 44.89 2.57
2798 5694 1.606668 GTGCAGTTCCACCGAAATGAA 59.393 47.619 4.62 0.00 44.89 2.57
2799 5695 1.606668 TGCAGTTCCACCGAAATGAAC 59.393 47.619 4.62 0.00 44.89 3.18
2800 5696 1.880027 GCAGTTCCACCGAAATGAACT 59.120 47.619 4.62 0.00 44.89 3.01
2801 5697 3.071479 GCAGTTCCACCGAAATGAACTA 58.929 45.455 4.62 0.00 44.89 2.24
2802 5698 3.500680 GCAGTTCCACCGAAATGAACTAA 59.499 43.478 4.62 0.00 44.89 2.24
2803 5699 4.612939 GCAGTTCCACCGAAATGAACTAAC 60.613 45.833 4.62 0.00 44.89 2.34
2804 5700 4.755123 CAGTTCCACCGAAATGAACTAACT 59.245 41.667 4.03 0.00 44.89 2.24
2805 5701 4.755123 AGTTCCACCGAAATGAACTAACTG 59.245 41.667 2.51 0.00 45.02 3.16
2806 5702 4.345859 TCCACCGAAATGAACTAACTGT 57.654 40.909 0.00 0.00 0.00 3.55
2807 5703 4.710324 TCCACCGAAATGAACTAACTGTT 58.290 39.130 0.00 0.00 42.38 3.16
2820 5716 7.440523 GAACTAACTGTTCCATTCTGACATT 57.559 36.000 0.00 0.00 46.89 2.71
2821 5717 7.440523 AACTAACTGTTCCATTCTGACATTC 57.559 36.000 0.00 0.00 32.63 2.67
2822 5718 5.940470 ACTAACTGTTCCATTCTGACATTCC 59.060 40.000 0.00 0.00 0.00 3.01
2823 5719 4.371624 ACTGTTCCATTCTGACATTCCA 57.628 40.909 0.00 0.00 0.00 3.53
2824 5720 4.330250 ACTGTTCCATTCTGACATTCCAG 58.670 43.478 0.00 0.00 35.55 3.86
2825 5721 4.202503 ACTGTTCCATTCTGACATTCCAGT 60.203 41.667 0.00 0.00 35.71 4.00
2826 5722 4.728772 TGTTCCATTCTGACATTCCAGTT 58.271 39.130 0.00 0.00 35.71 3.16
2827 5723 5.875224 TGTTCCATTCTGACATTCCAGTTA 58.125 37.500 0.00 0.00 35.71 2.24
2828 5724 6.303054 TGTTCCATTCTGACATTCCAGTTAA 58.697 36.000 0.00 0.00 35.71 2.01
2829 5725 6.775142 TGTTCCATTCTGACATTCCAGTTAAA 59.225 34.615 0.00 0.00 35.71 1.52
2830 5726 6.817765 TCCATTCTGACATTCCAGTTAAAC 57.182 37.500 0.00 0.00 35.71 2.01
2831 5727 6.303054 TCCATTCTGACATTCCAGTTAAACA 58.697 36.000 0.00 0.00 35.71 2.83
2832 5728 6.775142 TCCATTCTGACATTCCAGTTAAACAA 59.225 34.615 0.00 0.00 35.71 2.83
2833 5729 6.863126 CCATTCTGACATTCCAGTTAAACAAC 59.137 38.462 0.00 0.00 35.71 3.32
2834 5730 7.424803 CATTCTGACATTCCAGTTAAACAACA 58.575 34.615 0.00 0.00 35.71 3.33
2835 5731 6.371809 TCTGACATTCCAGTTAAACAACAC 57.628 37.500 0.00 0.00 35.71 3.32
2836 5732 5.883115 TCTGACATTCCAGTTAAACAACACA 59.117 36.000 0.00 0.00 35.71 3.72
2837 5733 6.375736 TCTGACATTCCAGTTAAACAACACAA 59.624 34.615 0.00 0.00 35.71 3.33
2838 5734 6.925211 TGACATTCCAGTTAAACAACACAAA 58.075 32.000 0.00 0.00 0.00 2.83
2839 5735 7.378966 TGACATTCCAGTTAAACAACACAAAA 58.621 30.769 0.00 0.00 0.00 2.44
2840 5736 7.543868 TGACATTCCAGTTAAACAACACAAAAG 59.456 33.333 0.00 0.00 0.00 2.27
2841 5737 7.382898 ACATTCCAGTTAAACAACACAAAAGT 58.617 30.769 0.00 0.00 0.00 2.66
2842 5738 7.544217 ACATTCCAGTTAAACAACACAAAAGTC 59.456 33.333 0.00 0.00 0.00 3.01
2843 5739 6.576662 TCCAGTTAAACAACACAAAAGTCA 57.423 33.333 0.00 0.00 0.00 3.41
2844 5740 6.383415 TCCAGTTAAACAACACAAAAGTCAC 58.617 36.000 0.00 0.00 0.00 3.67
2845 5741 6.207810 TCCAGTTAAACAACACAAAAGTCACT 59.792 34.615 0.00 0.00 0.00 3.41
2846 5742 6.866248 CCAGTTAAACAACACAAAAGTCACTT 59.134 34.615 0.00 0.00 0.00 3.16
2847 5743 7.061789 CCAGTTAAACAACACAAAAGTCACTTC 59.938 37.037 0.00 0.00 0.00 3.01
2848 5744 7.807907 CAGTTAAACAACACAAAAGTCACTTCT 59.192 33.333 0.00 0.00 0.00 2.85
2849 5745 8.357402 AGTTAAACAACACAAAAGTCACTTCTT 58.643 29.630 0.00 0.00 0.00 2.52
2850 5746 8.974408 GTTAAACAACACAAAAGTCACTTCTTT 58.026 29.630 0.00 0.00 39.00 2.52
2851 5747 9.535878 TTAAACAACACAAAAGTCACTTCTTTT 57.464 25.926 0.00 0.00 44.95 2.27
2853 5749 9.535878 AAACAACACAAAAGTCACTTCTTTTAA 57.464 25.926 0.00 0.00 43.09 1.52
2854 5750 8.742554 ACAACACAAAAGTCACTTCTTTTAAG 57.257 30.769 0.00 3.76 43.09 1.85
2855 5751 8.573035 ACAACACAAAAGTCACTTCTTTTAAGA 58.427 29.630 0.00 0.00 43.09 2.10
2856 5752 9.405587 CAACACAAAAGTCACTTCTTTTAAGAA 57.594 29.630 4.95 4.95 43.09 2.52
2869 5765 7.810766 TTCTTTTAAGAAGTGTTTTGTGCAG 57.189 32.000 0.89 0.00 39.95 4.41
2870 5766 6.919721 TCTTTTAAGAAGTGTTTTGTGCAGT 58.080 32.000 0.00 0.00 30.73 4.40
2871 5767 6.806249 TCTTTTAAGAAGTGTTTTGTGCAGTG 59.194 34.615 0.00 0.00 30.73 3.66
2872 5768 2.566952 AGAAGTGTTTTGTGCAGTGC 57.433 45.000 8.58 8.58 0.00 4.40
2873 5769 1.818060 AGAAGTGTTTTGTGCAGTGCA 59.182 42.857 15.37 15.37 35.60 4.57
2882 5778 4.353325 TGCAGTGCACCAAAAGGT 57.647 50.000 15.37 0.00 31.71 3.50
2883 5779 2.114638 TGCAGTGCACCAAAAGGTC 58.885 52.632 15.37 0.00 31.71 3.85
2884 5780 0.682532 TGCAGTGCACCAAAAGGTCA 60.683 50.000 15.37 0.00 31.71 4.02
2885 5781 0.249031 GCAGTGCACCAAAAGGTCAC 60.249 55.000 14.63 0.00 0.00 3.67
2886 5782 1.102154 CAGTGCACCAAAAGGTCACA 58.898 50.000 14.63 2.67 0.00 3.58
2887 5783 1.476085 CAGTGCACCAAAAGGTCACAA 59.524 47.619 14.63 0.00 0.00 3.33
2888 5784 1.476488 AGTGCACCAAAAGGTCACAAC 59.524 47.619 14.63 1.01 0.00 3.32
2889 5785 1.203523 GTGCACCAAAAGGTCACAACA 59.796 47.619 5.22 0.00 0.00 3.33
2890 5786 1.476085 TGCACCAAAAGGTCACAACAG 59.524 47.619 0.00 0.00 0.00 3.16
2891 5787 1.802508 GCACCAAAAGGTCACAACAGC 60.803 52.381 0.00 0.00 0.00 4.40
2892 5788 1.476085 CACCAAAAGGTCACAACAGCA 59.524 47.619 0.00 0.00 0.00 4.41
2893 5789 2.094286 CACCAAAAGGTCACAACAGCAA 60.094 45.455 0.00 0.00 0.00 3.91
2894 5790 2.094234 ACCAAAAGGTCACAACAGCAAC 60.094 45.455 0.00 0.00 0.00 4.17
2895 5791 2.539476 CAAAAGGTCACAACAGCAACC 58.461 47.619 0.00 0.00 0.00 3.77
2896 5792 1.846007 AAAGGTCACAACAGCAACCA 58.154 45.000 0.00 0.00 34.09 3.67
2897 5793 1.846007 AAGGTCACAACAGCAACCAA 58.154 45.000 0.00 0.00 34.09 3.67
2898 5794 1.392589 AGGTCACAACAGCAACCAAG 58.607 50.000 0.00 0.00 34.09 3.61
2899 5795 1.102978 GGTCACAACAGCAACCAAGT 58.897 50.000 0.00 0.00 0.00 3.16
2900 5796 1.202290 GGTCACAACAGCAACCAAGTG 60.202 52.381 0.00 0.00 0.00 3.16
2901 5797 1.742831 GTCACAACAGCAACCAAGTGA 59.257 47.619 0.00 0.00 34.02 3.41
2902 5798 2.163412 GTCACAACAGCAACCAAGTGAA 59.837 45.455 0.00 0.00 37.69 3.18
2903 5799 2.822561 TCACAACAGCAACCAAGTGAAA 59.177 40.909 0.00 0.00 33.55 2.69
2904 5800 3.446873 TCACAACAGCAACCAAGTGAAAT 59.553 39.130 0.00 0.00 33.55 2.17
2905 5801 3.552699 CACAACAGCAACCAAGTGAAATG 59.447 43.478 0.00 0.00 0.00 2.32
2906 5802 3.125316 CAACAGCAACCAAGTGAAATGG 58.875 45.455 0.00 0.00 43.84 3.16
2907 5803 2.665165 ACAGCAACCAAGTGAAATGGA 58.335 42.857 0.00 0.00 40.56 3.41
2908 5804 3.233507 ACAGCAACCAAGTGAAATGGAT 58.766 40.909 0.00 0.00 40.56 3.41
2909 5805 4.406456 ACAGCAACCAAGTGAAATGGATA 58.594 39.130 0.00 0.00 40.56 2.59
2910 5806 5.018809 ACAGCAACCAAGTGAAATGGATAT 58.981 37.500 0.00 0.00 40.56 1.63
2911 5807 5.126061 ACAGCAACCAAGTGAAATGGATATC 59.874 40.000 0.00 0.00 40.56 1.63
2912 5808 4.646492 AGCAACCAAGTGAAATGGATATCC 59.354 41.667 15.39 15.39 40.56 2.59
2913 5809 4.202151 GCAACCAAGTGAAATGGATATCCC 60.202 45.833 19.34 4.07 40.56 3.85
2914 5810 5.203528 CAACCAAGTGAAATGGATATCCCT 58.796 41.667 19.34 6.50 40.56 4.20
2915 5811 6.364701 CAACCAAGTGAAATGGATATCCCTA 58.635 40.000 19.34 1.37 40.56 3.53
2916 5812 6.786843 ACCAAGTGAAATGGATATCCCTAT 57.213 37.500 19.34 3.98 40.56 2.57
2917 5813 7.166758 ACCAAGTGAAATGGATATCCCTATT 57.833 36.000 19.34 10.13 40.56 1.73
2918 5814 7.595488 ACCAAGTGAAATGGATATCCCTATTT 58.405 34.615 19.34 17.55 40.56 1.40
2919 5815 7.506938 ACCAAGTGAAATGGATATCCCTATTTG 59.493 37.037 19.64 13.89 40.56 2.32
2920 5816 7.373493 CAAGTGAAATGGATATCCCTATTTGC 58.627 38.462 19.64 13.65 35.38 3.68
2921 5817 6.613699 AGTGAAATGGATATCCCTATTTGCA 58.386 36.000 19.64 14.97 35.38 4.08
2922 5818 6.491403 AGTGAAATGGATATCCCTATTTGCAC 59.509 38.462 19.64 21.56 32.80 4.57
2923 5819 6.265196 GTGAAATGGATATCCCTATTTGCACA 59.735 38.462 19.64 11.61 32.83 4.57
2924 5820 6.838090 TGAAATGGATATCCCTATTTGCACAA 59.162 34.615 19.64 0.00 35.38 3.33
2925 5821 7.344093 TGAAATGGATATCCCTATTTGCACAAA 59.656 33.333 19.64 0.00 35.38 2.83
2926 5822 7.860649 AATGGATATCCCTATTTGCACAAAT 57.139 32.000 19.34 12.82 38.69 2.32
2927 5823 8.954834 AATGGATATCCCTATTTGCACAAATA 57.045 30.769 19.34 13.61 40.23 1.40
2937 5833 5.824904 ATTTGCACAAATAGCTACAGAGG 57.175 39.130 6.82 0.00 39.08 3.69
2938 5834 4.551702 TTGCACAAATAGCTACAGAGGA 57.448 40.909 0.00 0.00 0.00 3.71
2939 5835 4.551702 TGCACAAATAGCTACAGAGGAA 57.448 40.909 0.00 0.00 0.00 3.36
2940 5836 4.905429 TGCACAAATAGCTACAGAGGAAA 58.095 39.130 0.00 0.00 0.00 3.13
2941 5837 4.695455 TGCACAAATAGCTACAGAGGAAAC 59.305 41.667 0.00 0.00 0.00 2.78
2942 5838 4.695455 GCACAAATAGCTACAGAGGAAACA 59.305 41.667 0.00 0.00 0.00 2.83
2943 5839 5.163814 GCACAAATAGCTACAGAGGAAACAG 60.164 44.000 0.00 0.00 0.00 3.16
2944 5840 5.934625 CACAAATAGCTACAGAGGAAACAGT 59.065 40.000 0.00 0.00 0.00 3.55
2945 5841 6.091441 CACAAATAGCTACAGAGGAAACAGTC 59.909 42.308 0.00 0.00 0.00 3.51
2946 5842 6.166279 CAAATAGCTACAGAGGAAACAGTCA 58.834 40.000 0.00 0.00 0.00 3.41
2947 5843 3.951775 AGCTACAGAGGAAACAGTCAG 57.048 47.619 0.00 0.00 0.00 3.51
2948 5844 3.501349 AGCTACAGAGGAAACAGTCAGA 58.499 45.455 0.00 0.00 0.00 3.27
2949 5845 3.509575 AGCTACAGAGGAAACAGTCAGAG 59.490 47.826 0.00 0.00 0.00 3.35
2950 5846 3.257127 GCTACAGAGGAAACAGTCAGAGT 59.743 47.826 0.00 0.00 0.00 3.24
2951 5847 4.617298 GCTACAGAGGAAACAGTCAGAGTC 60.617 50.000 0.00 0.00 0.00 3.36
2952 5848 3.571590 ACAGAGGAAACAGTCAGAGTCT 58.428 45.455 0.00 0.00 0.00 3.24
2953 5849 3.572255 ACAGAGGAAACAGTCAGAGTCTC 59.428 47.826 0.00 0.00 0.00 3.36
2954 5850 3.571828 CAGAGGAAACAGTCAGAGTCTCA 59.428 47.826 1.94 0.00 0.00 3.27
2955 5851 4.038522 CAGAGGAAACAGTCAGAGTCTCAA 59.961 45.833 1.94 0.00 0.00 3.02
2956 5852 4.651503 AGAGGAAACAGTCAGAGTCTCAAA 59.348 41.667 1.94 0.00 0.00 2.69
2957 5853 4.698575 AGGAAACAGTCAGAGTCTCAAAC 58.301 43.478 1.94 0.00 0.00 2.93
2958 5854 4.162320 AGGAAACAGTCAGAGTCTCAAACA 59.838 41.667 1.94 0.00 0.00 2.83
2959 5855 4.876107 GGAAACAGTCAGAGTCTCAAACAA 59.124 41.667 1.94 0.00 0.00 2.83
2960 5856 5.529060 GGAAACAGTCAGAGTCTCAAACAAT 59.471 40.000 1.94 0.00 0.00 2.71
2961 5857 6.038714 GGAAACAGTCAGAGTCTCAAACAATT 59.961 38.462 1.94 0.00 0.00 2.32
2962 5858 7.226720 GGAAACAGTCAGAGTCTCAAACAATTA 59.773 37.037 1.94 0.00 0.00 1.40
2963 5859 7.484035 AACAGTCAGAGTCTCAAACAATTAC 57.516 36.000 1.94 0.00 0.00 1.89
2964 5860 6.582636 ACAGTCAGAGTCTCAAACAATTACA 58.417 36.000 1.94 0.00 0.00 2.41
2965 5861 7.047891 ACAGTCAGAGTCTCAAACAATTACAA 58.952 34.615 1.94 0.00 0.00 2.41
2966 5862 7.225538 ACAGTCAGAGTCTCAAACAATTACAAG 59.774 37.037 1.94 0.00 0.00 3.16
2967 5863 6.203723 AGTCAGAGTCTCAAACAATTACAAGC 59.796 38.462 1.94 0.00 0.00 4.01
2968 5864 6.017934 GTCAGAGTCTCAAACAATTACAAGCA 60.018 38.462 1.94 0.00 0.00 3.91
2969 5865 6.542005 TCAGAGTCTCAAACAATTACAAGCAA 59.458 34.615 1.94 0.00 0.00 3.91
2970 5866 7.066887 TCAGAGTCTCAAACAATTACAAGCAAA 59.933 33.333 1.94 0.00 0.00 3.68
2971 5867 7.701924 CAGAGTCTCAAACAATTACAAGCAAAA 59.298 33.333 1.94 0.00 0.00 2.44
2972 5868 8.250332 AGAGTCTCAAACAATTACAAGCAAAAA 58.750 29.630 1.94 0.00 0.00 1.94
2973 5869 8.185003 AGTCTCAAACAATTACAAGCAAAAAC 57.815 30.769 0.00 0.00 0.00 2.43
2974 5870 7.816995 AGTCTCAAACAATTACAAGCAAAAACA 59.183 29.630 0.00 0.00 0.00 2.83
2975 5871 8.603181 GTCTCAAACAATTACAAGCAAAAACAT 58.397 29.630 0.00 0.00 0.00 2.71
2976 5872 9.160496 TCTCAAACAATTACAAGCAAAAACATT 57.840 25.926 0.00 0.00 0.00 2.71
2977 5873 9.771915 CTCAAACAATTACAAGCAAAAACATTT 57.228 25.926 0.00 0.00 0.00 2.32
2978 5874 9.552114 TCAAACAATTACAAGCAAAAACATTTG 57.448 25.926 0.00 0.00 35.15 2.32
2979 5875 8.796278 CAAACAATTACAAGCAAAAACATTTGG 58.204 29.630 3.75 0.00 32.78 3.28
2980 5876 7.856145 ACAATTACAAGCAAAAACATTTGGA 57.144 28.000 3.75 0.00 32.78 3.53
2981 5877 8.449251 ACAATTACAAGCAAAAACATTTGGAT 57.551 26.923 3.75 0.00 32.78 3.41
2982 5878 9.553064 ACAATTACAAGCAAAAACATTTGGATA 57.447 25.926 3.75 0.00 32.78 2.59
2986 5882 9.606631 TTACAAGCAAAAACATTTGGATAAACT 57.393 25.926 3.75 0.00 32.78 2.66
2987 5883 8.504812 ACAAGCAAAAACATTTGGATAAACTT 57.495 26.923 3.75 0.00 32.78 2.66
2988 5884 8.397148 ACAAGCAAAAACATTTGGATAAACTTG 58.603 29.630 11.81 11.81 34.14 3.16
2989 5885 8.397148 CAAGCAAAAACATTTGGATAAACTTGT 58.603 29.630 3.75 0.00 32.78 3.16
2990 5886 8.141835 AGCAAAAACATTTGGATAAACTTGTC 57.858 30.769 3.75 0.00 32.78 3.18
2991 5887 7.768120 AGCAAAAACATTTGGATAAACTTGTCA 59.232 29.630 3.75 0.00 32.78 3.58
2992 5888 8.558700 GCAAAAACATTTGGATAAACTTGTCAT 58.441 29.630 3.75 0.00 32.78 3.06
2993 5889 9.866936 CAAAAACATTTGGATAAACTTGTCATG 57.133 29.630 0.00 0.00 0.00 3.07
2994 5890 8.606040 AAAACATTTGGATAAACTTGTCATGG 57.394 30.769 0.00 0.00 0.00 3.66
2995 5891 5.723295 ACATTTGGATAAACTTGTCATGGC 58.277 37.500 0.00 0.00 0.00 4.40
2996 5892 5.481473 ACATTTGGATAAACTTGTCATGGCT 59.519 36.000 0.00 0.00 0.00 4.75
2997 5893 6.014327 ACATTTGGATAAACTTGTCATGGCTT 60.014 34.615 0.00 0.00 0.00 4.35
2998 5894 7.178274 ACATTTGGATAAACTTGTCATGGCTTA 59.822 33.333 0.00 0.00 0.00 3.09
2999 5895 7.716799 TTTGGATAAACTTGTCATGGCTTAT 57.283 32.000 0.00 0.00 0.00 1.73
3000 5896 8.815565 TTTGGATAAACTTGTCATGGCTTATA 57.184 30.769 0.00 0.00 0.00 0.98
3001 5897 8.815565 TTGGATAAACTTGTCATGGCTTATAA 57.184 30.769 0.00 0.00 0.00 0.98
3002 5898 8.220755 TGGATAAACTTGTCATGGCTTATAAC 57.779 34.615 0.00 0.00 0.00 1.89
3003 5899 7.831690 TGGATAAACTTGTCATGGCTTATAACA 59.168 33.333 0.00 0.00 0.00 2.41
3004 5900 8.345565 GGATAAACTTGTCATGGCTTATAACAG 58.654 37.037 0.00 0.00 0.00 3.16
3005 5901 8.807948 ATAAACTTGTCATGGCTTATAACAGT 57.192 30.769 0.00 0.00 0.00 3.55
3006 5902 6.500684 AACTTGTCATGGCTTATAACAGTG 57.499 37.500 0.00 0.00 0.00 3.66
3007 5903 4.943705 ACTTGTCATGGCTTATAACAGTGG 59.056 41.667 0.00 0.00 0.00 4.00
3008 5904 3.278574 TGTCATGGCTTATAACAGTGGC 58.721 45.455 0.00 0.00 0.00 5.01
3009 5905 3.278574 GTCATGGCTTATAACAGTGGCA 58.721 45.455 0.00 1.90 39.22 4.92
3010 5906 3.885297 GTCATGGCTTATAACAGTGGCAT 59.115 43.478 5.87 5.87 44.60 4.40
3012 5908 2.653726 TGGCTTATAACAGTGGCATGG 58.346 47.619 0.00 0.00 0.00 3.66
3013 5909 1.338020 GGCTTATAACAGTGGCATGGC 59.662 52.381 13.29 13.29 0.00 4.40
3014 5910 2.301346 GCTTATAACAGTGGCATGGCT 58.699 47.619 21.08 1.68 0.00 4.75
3015 5911 2.689983 GCTTATAACAGTGGCATGGCTT 59.310 45.455 21.08 8.71 0.00 4.35
3016 5912 3.243201 GCTTATAACAGTGGCATGGCTTC 60.243 47.826 21.08 13.13 0.00 3.86
3017 5913 2.512692 ATAACAGTGGCATGGCTTCA 57.487 45.000 21.08 0.00 0.00 3.02
3018 5914 2.512692 TAACAGTGGCATGGCTTCAT 57.487 45.000 21.08 5.69 0.00 2.57
3019 5915 1.636148 AACAGTGGCATGGCTTCATT 58.364 45.000 21.08 7.16 0.00 2.57
3020 5916 1.636148 ACAGTGGCATGGCTTCATTT 58.364 45.000 21.08 0.00 0.00 2.32
3021 5917 1.972795 ACAGTGGCATGGCTTCATTTT 59.027 42.857 21.08 0.00 0.00 1.82
3022 5918 3.164268 ACAGTGGCATGGCTTCATTTTA 58.836 40.909 21.08 0.00 0.00 1.52
3023 5919 3.056607 ACAGTGGCATGGCTTCATTTTAC 60.057 43.478 21.08 7.39 0.00 2.01
3024 5920 2.497273 AGTGGCATGGCTTCATTTTACC 59.503 45.455 21.08 0.00 0.00 2.85
3025 5921 2.233431 GTGGCATGGCTTCATTTTACCA 59.767 45.455 21.08 0.00 36.43 3.25
3026 5922 2.496871 TGGCATGGCTTCATTTTACCAG 59.503 45.455 21.08 0.00 35.20 4.00
3027 5923 2.159057 GGCATGGCTTCATTTTACCAGG 60.159 50.000 12.86 0.00 37.05 4.45
3028 5924 2.159057 GCATGGCTTCATTTTACCAGGG 60.159 50.000 0.00 0.00 34.63 4.45
3029 5925 2.230130 TGGCTTCATTTTACCAGGGG 57.770 50.000 0.00 0.00 0.00 4.79
3030 5926 0.824109 GGCTTCATTTTACCAGGGGC 59.176 55.000 0.00 0.00 0.00 5.80
3031 5927 1.555967 GCTTCATTTTACCAGGGGCA 58.444 50.000 0.00 0.00 0.00 5.36
3032 5928 2.110578 GCTTCATTTTACCAGGGGCAT 58.889 47.619 0.00 0.00 0.00 4.40
3033 5929 2.501316 GCTTCATTTTACCAGGGGCATT 59.499 45.455 0.00 0.00 0.00 3.56
3034 5930 3.704061 GCTTCATTTTACCAGGGGCATTA 59.296 43.478 0.00 0.00 0.00 1.90
3035 5931 4.441495 GCTTCATTTTACCAGGGGCATTAC 60.441 45.833 0.00 0.00 0.00 1.89
3036 5932 4.323569 TCATTTTACCAGGGGCATTACA 57.676 40.909 0.00 0.00 0.00 2.41
3037 5933 4.877773 TCATTTTACCAGGGGCATTACAT 58.122 39.130 0.00 0.00 0.00 2.29
3038 5934 5.276440 TCATTTTACCAGGGGCATTACATT 58.724 37.500 0.00 0.00 0.00 2.71
3039 5935 6.436027 TCATTTTACCAGGGGCATTACATTA 58.564 36.000 0.00 0.00 0.00 1.90
3040 5936 6.897966 TCATTTTACCAGGGGCATTACATTAA 59.102 34.615 0.00 0.00 0.00 1.40
3041 5937 6.783708 TTTTACCAGGGGCATTACATTAAG 57.216 37.500 0.00 0.00 0.00 1.85
3042 5938 5.718801 TTACCAGGGGCATTACATTAAGA 57.281 39.130 0.00 0.00 0.00 2.10
3043 5939 4.601406 ACCAGGGGCATTACATTAAGAA 57.399 40.909 0.00 0.00 0.00 2.52
3044 5940 4.278310 ACCAGGGGCATTACATTAAGAAC 58.722 43.478 0.00 0.00 0.00 3.01
3045 5941 4.264172 ACCAGGGGCATTACATTAAGAACA 60.264 41.667 0.00 0.00 0.00 3.18
3046 5942 4.339247 CCAGGGGCATTACATTAAGAACAG 59.661 45.833 0.00 0.00 0.00 3.16
3047 5943 3.954258 AGGGGCATTACATTAAGAACAGC 59.046 43.478 0.00 0.00 0.00 4.40
3048 5944 3.954258 GGGGCATTACATTAAGAACAGCT 59.046 43.478 0.00 0.00 0.00 4.24
3049 5945 5.104109 AGGGGCATTACATTAAGAACAGCTA 60.104 40.000 0.00 0.00 0.00 3.32
3050 5946 5.592688 GGGGCATTACATTAAGAACAGCTAA 59.407 40.000 0.00 0.00 0.00 3.09
3051 5947 6.096282 GGGGCATTACATTAAGAACAGCTAAA 59.904 38.462 0.00 0.00 0.00 1.85
3052 5948 7.201911 GGGGCATTACATTAAGAACAGCTAAAT 60.202 37.037 0.00 0.00 0.00 1.40
3053 5949 8.846211 GGGCATTACATTAAGAACAGCTAAATA 58.154 33.333 0.00 0.00 0.00 1.40
3066 5962 9.574516 AGAACAGCTAAATATTTGGTATAAGGG 57.425 33.333 11.05 0.00 0.00 3.95
3067 5963 7.761038 ACAGCTAAATATTTGGTATAAGGGC 57.239 36.000 11.05 2.15 0.00 5.19
3068 5964 7.294584 ACAGCTAAATATTTGGTATAAGGGCA 58.705 34.615 11.05 0.00 0.00 5.36
3069 5965 7.950124 ACAGCTAAATATTTGGTATAAGGGCAT 59.050 33.333 11.05 0.00 0.00 4.40
3070 5966 8.246180 CAGCTAAATATTTGGTATAAGGGCATG 58.754 37.037 11.05 0.00 0.00 4.06
3071 5967 7.397192 AGCTAAATATTTGGTATAAGGGCATGG 59.603 37.037 11.05 0.00 0.00 3.66
3072 5968 6.933514 AAATATTTGGTATAAGGGCATGGG 57.066 37.500 0.00 0.00 0.00 4.00
3073 5969 5.876691 ATATTTGGTATAAGGGCATGGGA 57.123 39.130 0.00 0.00 0.00 4.37
3074 5970 3.306472 TTTGGTATAAGGGCATGGGAC 57.694 47.619 0.00 0.00 0.00 4.46
3086 5982 2.117206 TGGGACAATGGGTGCACC 59.883 61.111 28.57 28.57 40.06 5.01
3099 5995 3.360340 GCACCAGCAGTCCAGCAC 61.360 66.667 0.00 0.00 41.58 4.40
3100 5996 2.670934 CACCAGCAGTCCAGCACC 60.671 66.667 0.00 0.00 36.85 5.01
3101 5997 3.170672 ACCAGCAGTCCAGCACCA 61.171 61.111 0.00 0.00 36.85 4.17
3102 5998 2.353958 CCAGCAGTCCAGCACCAT 59.646 61.111 0.00 0.00 36.85 3.55
3103 5999 2.044555 CCAGCAGTCCAGCACCATG 61.045 63.158 0.00 0.00 36.85 3.66
3104 6000 1.303074 CAGCAGTCCAGCACCATGT 60.303 57.895 0.00 0.00 36.85 3.21
3105 6001 0.036105 CAGCAGTCCAGCACCATGTA 60.036 55.000 0.00 0.00 36.85 2.29
3106 6002 0.036010 AGCAGTCCAGCACCATGTAC 60.036 55.000 0.00 0.00 36.85 2.90
3107 6003 1.026718 GCAGTCCAGCACCATGTACC 61.027 60.000 0.00 0.00 0.00 3.34
3108 6004 0.615331 CAGTCCAGCACCATGTACCT 59.385 55.000 0.00 0.00 0.00 3.08
3109 6005 1.831106 CAGTCCAGCACCATGTACCTA 59.169 52.381 0.00 0.00 0.00 3.08
3110 6006 2.236146 CAGTCCAGCACCATGTACCTAA 59.764 50.000 0.00 0.00 0.00 2.69
3111 6007 2.910319 AGTCCAGCACCATGTACCTAAA 59.090 45.455 0.00 0.00 0.00 1.85
3112 6008 3.007635 GTCCAGCACCATGTACCTAAAC 58.992 50.000 0.00 0.00 0.00 2.01
3113 6009 2.910319 TCCAGCACCATGTACCTAAACT 59.090 45.455 0.00 0.00 0.00 2.66
3114 6010 3.009723 CCAGCACCATGTACCTAAACTG 58.990 50.000 0.00 0.00 0.00 3.16
3115 6011 3.307410 CCAGCACCATGTACCTAAACTGA 60.307 47.826 0.00 0.00 0.00 3.41
3116 6012 3.935203 CAGCACCATGTACCTAAACTGAG 59.065 47.826 0.00 0.00 0.00 3.35
3117 6013 3.055094 AGCACCATGTACCTAAACTGAGG 60.055 47.826 0.00 0.00 42.89 3.86
3118 6014 3.270877 CACCATGTACCTAAACTGAGGC 58.729 50.000 0.00 0.00 40.65 4.70
3119 6015 2.910319 ACCATGTACCTAAACTGAGGCA 59.090 45.455 0.00 0.00 40.65 4.75
3120 6016 3.523564 ACCATGTACCTAAACTGAGGCAT 59.476 43.478 0.00 0.00 40.65 4.40
3121 6017 4.719773 ACCATGTACCTAAACTGAGGCATA 59.280 41.667 0.00 0.00 40.65 3.14
3122 6018 5.190925 ACCATGTACCTAAACTGAGGCATAA 59.809 40.000 0.00 0.00 40.65 1.90
3123 6019 6.119536 CCATGTACCTAAACTGAGGCATAAA 58.880 40.000 0.00 0.00 40.65 1.40
3124 6020 6.260936 CCATGTACCTAAACTGAGGCATAAAG 59.739 42.308 0.00 0.00 40.65 1.85
3125 6021 6.368779 TGTACCTAAACTGAGGCATAAAGT 57.631 37.500 0.00 0.00 40.65 2.66
3126 6022 6.170506 TGTACCTAAACTGAGGCATAAAGTG 58.829 40.000 0.00 0.00 40.65 3.16
3127 6023 4.589908 ACCTAAACTGAGGCATAAAGTGG 58.410 43.478 0.00 0.00 40.65 4.00
3128 6024 4.042934 ACCTAAACTGAGGCATAAAGTGGT 59.957 41.667 0.00 0.00 40.65 4.16
3129 6025 4.396166 CCTAAACTGAGGCATAAAGTGGTG 59.604 45.833 0.00 0.00 0.00 4.17
3130 6026 3.788227 AACTGAGGCATAAAGTGGTGA 57.212 42.857 0.00 0.00 0.00 4.02
3131 6027 4.307032 AACTGAGGCATAAAGTGGTGAT 57.693 40.909 0.00 0.00 0.00 3.06
3132 6028 4.307032 ACTGAGGCATAAAGTGGTGATT 57.693 40.909 0.00 0.00 0.00 2.57
3133 6029 4.265073 ACTGAGGCATAAAGTGGTGATTC 58.735 43.478 0.00 0.00 0.00 2.52
3134 6030 4.263462 ACTGAGGCATAAAGTGGTGATTCA 60.263 41.667 0.00 0.00 0.00 2.57
3135 6031 4.264253 TGAGGCATAAAGTGGTGATTCAG 58.736 43.478 0.00 0.00 0.00 3.02
3136 6032 4.019411 TGAGGCATAAAGTGGTGATTCAGA 60.019 41.667 0.00 0.00 0.00 3.27
3137 6033 4.521146 AGGCATAAAGTGGTGATTCAGAG 58.479 43.478 0.00 0.00 0.00 3.35
3138 6034 4.018960 AGGCATAAAGTGGTGATTCAGAGT 60.019 41.667 0.00 0.00 0.00 3.24
3139 6035 4.702131 GGCATAAAGTGGTGATTCAGAGTT 59.298 41.667 0.00 0.00 0.00 3.01
3140 6036 5.183904 GGCATAAAGTGGTGATTCAGAGTTT 59.816 40.000 0.00 0.00 0.00 2.66
3141 6037 6.088824 GCATAAAGTGGTGATTCAGAGTTTG 58.911 40.000 7.99 0.00 0.00 2.93
3142 6038 6.294176 GCATAAAGTGGTGATTCAGAGTTTGT 60.294 38.462 7.99 1.36 0.00 2.83
3143 6039 7.651808 CATAAAGTGGTGATTCAGAGTTTGTT 58.348 34.615 7.99 0.00 0.00 2.83
3144 6040 8.783093 CATAAAGTGGTGATTCAGAGTTTGTTA 58.217 33.333 7.99 0.00 0.00 2.41
3145 6041 6.619801 AAGTGGTGATTCAGAGTTTGTTAC 57.380 37.500 0.00 0.00 0.00 2.50
3146 6042 5.063880 AGTGGTGATTCAGAGTTTGTTACC 58.936 41.667 0.00 0.00 0.00 2.85
3147 6043 4.215613 GTGGTGATTCAGAGTTTGTTACCC 59.784 45.833 0.00 0.00 0.00 3.69
3148 6044 3.756963 GGTGATTCAGAGTTTGTTACCCC 59.243 47.826 0.00 0.00 0.00 4.95
3149 6045 3.435671 GTGATTCAGAGTTTGTTACCCCG 59.564 47.826 0.00 0.00 0.00 5.73
3150 6046 2.554370 TTCAGAGTTTGTTACCCCGG 57.446 50.000 0.00 0.00 0.00 5.73
3151 6047 0.688487 TCAGAGTTTGTTACCCCGGG 59.312 55.000 15.80 15.80 0.00 5.73
3152 6048 0.688487 CAGAGTTTGTTACCCCGGGA 59.312 55.000 26.32 0.00 0.00 5.14
3153 6049 1.072648 CAGAGTTTGTTACCCCGGGAA 59.927 52.381 26.32 6.21 0.00 3.97
3154 6050 1.776063 AGAGTTTGTTACCCCGGGAAA 59.224 47.619 26.32 13.69 0.00 3.13
3155 6051 1.881973 GAGTTTGTTACCCCGGGAAAC 59.118 52.381 26.32 25.01 0.00 2.78
3156 6052 1.214923 AGTTTGTTACCCCGGGAAACA 59.785 47.619 27.84 27.84 0.00 2.83
3157 6053 2.030371 GTTTGTTACCCCGGGAAACAA 58.970 47.619 33.11 33.11 40.36 2.83
3158 6054 2.429971 GTTTGTTACCCCGGGAAACAAA 59.570 45.455 37.26 37.26 45.73 2.83
3159 6055 1.689984 TGTTACCCCGGGAAACAAAC 58.310 50.000 28.83 20.99 30.54 2.93
3160 6056 1.064166 TGTTACCCCGGGAAACAAACA 60.064 47.619 28.83 22.75 30.54 2.83
3161 6057 2.241160 GTTACCCCGGGAAACAAACAT 58.759 47.619 26.32 0.00 0.00 2.71
3162 6058 2.203470 TACCCCGGGAAACAAACATC 57.797 50.000 26.32 0.00 0.00 3.06
3163 6059 0.541063 ACCCCGGGAAACAAACATCC 60.541 55.000 26.32 0.00 34.85 3.51
3164 6060 0.540830 CCCCGGGAAACAAACATCCA 60.541 55.000 26.32 0.00 37.46 3.41
3165 6061 1.333177 CCCGGGAAACAAACATCCAA 58.667 50.000 18.48 0.00 37.46 3.53
3166 6062 1.899142 CCCGGGAAACAAACATCCAAT 59.101 47.619 18.48 0.00 37.46 3.16
3167 6063 3.093057 CCCGGGAAACAAACATCCAATA 58.907 45.455 18.48 0.00 37.46 1.90
3168 6064 3.511934 CCCGGGAAACAAACATCCAATAA 59.488 43.478 18.48 0.00 37.46 1.40
3169 6065 4.021016 CCCGGGAAACAAACATCCAATAAA 60.021 41.667 18.48 0.00 37.46 1.40
3170 6066 4.926832 CCGGGAAACAAACATCCAATAAAC 59.073 41.667 0.00 0.00 37.46 2.01
3171 6067 5.509840 CCGGGAAACAAACATCCAATAAACA 60.510 40.000 0.00 0.00 37.46 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 7.321908 TCAAAATCCCATTGACAACATGTATG 58.678 34.615 0.00 2.55 32.10 2.39
173 174 2.423577 GTACCTCATGCCACGAAAAGT 58.576 47.619 0.00 0.00 0.00 2.66
185 186 6.129179 CCCACTCATTTAAATGGTACCTCAT 58.871 40.000 24.40 0.00 37.03 2.90
239 240 5.574188 AGAAGAATGCCTAAGGTTGAACAT 58.426 37.500 0.00 0.00 0.00 2.71
358 359 2.738000 GCAACAAGCCACAACAATGTCA 60.738 45.455 0.00 0.00 37.82 3.58
699 747 6.881602 AGCAAGTACTTGGAGAGAAAATAAGG 59.118 38.462 31.42 6.00 40.74 2.69
978 1031 3.650942 TGGTAGGTGTCCTTGAGATTTGT 59.349 43.478 0.00 0.00 34.61 2.83
988 1041 2.912956 ACAATGACATGGTAGGTGTCCT 59.087 45.455 0.00 0.00 44.10 3.85
1036 1089 0.179000 GGTCTATGGCCACCAGTCAG 59.821 60.000 8.16 0.00 36.75 3.51
1068 1121 4.927267 ACCATTCCAGTGGACATTCTTA 57.073 40.909 12.69 0.00 42.02 2.10
1185 4004 5.823209 TCAATGATTTGAGGTGCACTATG 57.177 39.130 17.98 1.87 36.94 2.23
1479 4337 8.829373 ACTTATTTCAGAAGAATTGGGCTATT 57.171 30.769 0.00 0.00 32.89 1.73
1691 4581 0.328258 TAGGCTTGTTCAGGAAGGGC 59.672 55.000 0.00 0.00 0.00 5.19
1830 4720 3.093278 CGAGGCATCGGCTTTGTC 58.907 61.111 13.95 0.00 45.39 3.18
1995 4885 0.535335 GTGGGGTTGACATCGCTAGA 59.465 55.000 0.00 0.00 0.00 2.43
2192 5083 5.475909 CACCCATATAAGATCAGCATGCTTT 59.524 40.000 19.98 12.67 34.76 3.51
2277 5170 9.097257 AGTTCAATGTTTTGGTTGTAATCAAAG 57.903 29.630 3.57 0.00 34.83 2.77
2718 5614 3.288092 GGCACCATAACCTTCCTTTAGG 58.712 50.000 0.00 0.00 41.31 2.69
2719 5615 3.963129 TGGCACCATAACCTTCCTTTAG 58.037 45.455 0.00 0.00 0.00 1.85
2720 5616 4.390129 TTGGCACCATAACCTTCCTTTA 57.610 40.909 0.00 0.00 0.00 1.85
2721 5617 2.990740 TGGCACCATAACCTTCCTTT 57.009 45.000 0.00 0.00 0.00 3.11
2722 5618 2.990740 TTGGCACCATAACCTTCCTT 57.009 45.000 0.00 0.00 0.00 3.36
2723 5619 4.473444 CATATTGGCACCATAACCTTCCT 58.527 43.478 0.00 0.00 0.00 3.36
2724 5620 3.573967 CCATATTGGCACCATAACCTTCC 59.426 47.826 0.00 0.00 0.00 3.46
2725 5621 4.469657 TCCATATTGGCACCATAACCTTC 58.530 43.478 0.00 0.00 37.47 3.46
2726 5622 4.534647 TCCATATTGGCACCATAACCTT 57.465 40.909 0.00 0.00 37.47 3.50
2727 5623 4.410099 CATCCATATTGGCACCATAACCT 58.590 43.478 0.00 0.00 37.47 3.50
2728 5624 3.511146 CCATCCATATTGGCACCATAACC 59.489 47.826 0.00 0.00 37.47 2.85
2729 5625 4.022068 CACCATCCATATTGGCACCATAAC 60.022 45.833 0.00 0.00 37.47 1.89
2730 5626 4.141065 TCACCATCCATATTGGCACCATAA 60.141 41.667 0.00 0.00 37.47 1.90
2731 5627 3.397282 TCACCATCCATATTGGCACCATA 59.603 43.478 0.00 0.00 37.47 2.74
2732 5628 2.177451 TCACCATCCATATTGGCACCAT 59.823 45.455 0.00 0.00 37.47 3.55
2733 5629 1.568123 TCACCATCCATATTGGCACCA 59.432 47.619 0.00 0.00 37.47 4.17
2734 5630 2.233271 CTCACCATCCATATTGGCACC 58.767 52.381 0.00 0.00 37.47 5.01
2735 5631 2.158623 TCCTCACCATCCATATTGGCAC 60.159 50.000 0.00 0.00 37.47 5.01
2736 5632 2.134354 TCCTCACCATCCATATTGGCA 58.866 47.619 0.00 0.00 37.47 4.92
2737 5633 2.957402 TCCTCACCATCCATATTGGC 57.043 50.000 0.00 0.00 37.47 4.52
2738 5634 4.084287 CCAATCCTCACCATCCATATTGG 58.916 47.826 0.00 0.00 39.43 3.16
2739 5635 4.989277 TCCAATCCTCACCATCCATATTG 58.011 43.478 0.00 0.00 0.00 1.90
2740 5636 5.103558 TGTTCCAATCCTCACCATCCATATT 60.104 40.000 0.00 0.00 0.00 1.28
2741 5637 4.416513 TGTTCCAATCCTCACCATCCATAT 59.583 41.667 0.00 0.00 0.00 1.78
2742 5638 3.785325 TGTTCCAATCCTCACCATCCATA 59.215 43.478 0.00 0.00 0.00 2.74
2743 5639 2.582172 TGTTCCAATCCTCACCATCCAT 59.418 45.455 0.00 0.00 0.00 3.41
2744 5640 1.991813 TGTTCCAATCCTCACCATCCA 59.008 47.619 0.00 0.00 0.00 3.41
2745 5641 2.290896 TGTGTTCCAATCCTCACCATCC 60.291 50.000 0.00 0.00 0.00 3.51
2746 5642 3.012518 CTGTGTTCCAATCCTCACCATC 58.987 50.000 0.00 0.00 0.00 3.51
2747 5643 2.644299 TCTGTGTTCCAATCCTCACCAT 59.356 45.455 0.00 0.00 0.00 3.55
2748 5644 2.054021 TCTGTGTTCCAATCCTCACCA 58.946 47.619 0.00 0.00 0.00 4.17
2749 5645 2.859165 TCTGTGTTCCAATCCTCACC 57.141 50.000 0.00 0.00 0.00 4.02
2750 5646 4.187694 GAGATCTGTGTTCCAATCCTCAC 58.812 47.826 0.00 0.00 0.00 3.51
2751 5647 3.198635 GGAGATCTGTGTTCCAATCCTCA 59.801 47.826 0.00 0.00 0.00 3.86
2752 5648 3.432890 GGGAGATCTGTGTTCCAATCCTC 60.433 52.174 0.00 0.00 32.50 3.71
2753 5649 2.507471 GGGAGATCTGTGTTCCAATCCT 59.493 50.000 0.00 0.00 32.50 3.24
2754 5650 2.507471 AGGGAGATCTGTGTTCCAATCC 59.493 50.000 0.00 0.00 32.50 3.01
2755 5651 3.922171 AGGGAGATCTGTGTTCCAATC 57.078 47.619 0.00 0.00 32.50 2.67
2756 5652 4.202609 ACAAAGGGAGATCTGTGTTCCAAT 60.203 41.667 0.00 0.00 31.56 3.16
2757 5653 3.138283 ACAAAGGGAGATCTGTGTTCCAA 59.862 43.478 0.00 0.00 31.56 3.53
2758 5654 2.711009 ACAAAGGGAGATCTGTGTTCCA 59.289 45.455 0.00 0.00 31.56 3.53
2759 5655 3.077359 CACAAAGGGAGATCTGTGTTCC 58.923 50.000 0.00 0.00 33.22 3.62
2760 5656 2.485814 GCACAAAGGGAGATCTGTGTTC 59.514 50.000 0.00 0.00 41.00 3.18
2761 5657 2.158623 TGCACAAAGGGAGATCTGTGTT 60.159 45.455 0.00 0.00 41.00 3.32
2762 5658 1.421268 TGCACAAAGGGAGATCTGTGT 59.579 47.619 0.00 0.00 41.00 3.72
2763 5659 2.082231 CTGCACAAAGGGAGATCTGTG 58.918 52.381 0.00 2.75 41.68 3.66
2764 5660 1.701847 ACTGCACAAAGGGAGATCTGT 59.298 47.619 0.00 0.00 0.00 3.41
2765 5661 2.486472 ACTGCACAAAGGGAGATCTG 57.514 50.000 0.00 0.00 0.00 2.90
2766 5662 2.290577 GGAACTGCACAAAGGGAGATCT 60.291 50.000 0.00 0.00 30.52 2.75
2767 5663 2.087646 GGAACTGCACAAAGGGAGATC 58.912 52.381 0.00 0.00 0.00 2.75
2768 5664 1.425066 TGGAACTGCACAAAGGGAGAT 59.575 47.619 0.00 0.00 0.00 2.75
2769 5665 0.843309 TGGAACTGCACAAAGGGAGA 59.157 50.000 0.00 0.00 0.00 3.71
2770 5666 0.954452 GTGGAACTGCACAAAGGGAG 59.046 55.000 0.00 0.00 0.00 4.30
2771 5667 0.467290 GGTGGAACTGCACAAAGGGA 60.467 55.000 3.68 0.00 36.74 4.20
2772 5668 1.795170 CGGTGGAACTGCACAAAGGG 61.795 60.000 3.68 0.00 35.75 3.95
2773 5669 0.817634 TCGGTGGAACTGCACAAAGG 60.818 55.000 3.68 0.00 44.90 3.11
2774 5670 1.021202 TTCGGTGGAACTGCACAAAG 58.979 50.000 3.68 0.00 44.90 2.77
2775 5671 1.464734 TTTCGGTGGAACTGCACAAA 58.535 45.000 3.68 0.00 44.90 2.83
2776 5672 1.336440 CATTTCGGTGGAACTGCACAA 59.664 47.619 3.68 0.00 44.90 3.33
2777 5673 0.950836 CATTTCGGTGGAACTGCACA 59.049 50.000 3.68 0.00 44.90 4.57
2778 5674 1.234821 TCATTTCGGTGGAACTGCAC 58.765 50.000 0.00 0.00 44.90 4.57
2779 5675 1.606668 GTTCATTTCGGTGGAACTGCA 59.393 47.619 0.00 0.00 44.90 4.41
2780 5676 1.880027 AGTTCATTTCGGTGGAACTGC 59.120 47.619 5.55 0.00 46.81 4.40
2783 5679 4.514066 ACAGTTAGTTCATTTCGGTGGAAC 59.486 41.667 0.00 0.00 40.84 3.62
2784 5680 4.710324 ACAGTTAGTTCATTTCGGTGGAA 58.290 39.130 0.00 0.00 0.00 3.53
2785 5681 4.345859 ACAGTTAGTTCATTTCGGTGGA 57.654 40.909 0.00 0.00 0.00 4.02
2798 5694 8.225403 CTGGAATGTCAGAATGGAACAGTTAGT 61.225 40.741 0.00 0.00 36.00 2.24
2799 5695 6.093219 CTGGAATGTCAGAATGGAACAGTTAG 59.907 42.308 0.00 0.00 36.00 2.34
2800 5696 5.939883 CTGGAATGTCAGAATGGAACAGTTA 59.060 40.000 0.00 0.00 36.00 2.24
2801 5697 4.763793 CTGGAATGTCAGAATGGAACAGTT 59.236 41.667 0.00 0.00 36.00 3.16
2802 5698 4.202503 ACTGGAATGTCAGAATGGAACAGT 60.203 41.667 2.98 0.00 42.06 3.55
2803 5699 4.330250 ACTGGAATGTCAGAATGGAACAG 58.670 43.478 2.98 0.00 39.07 3.16
2804 5700 4.371624 ACTGGAATGTCAGAATGGAACA 57.628 40.909 2.98 0.00 39.68 3.18
2805 5701 6.817765 TTAACTGGAATGTCAGAATGGAAC 57.182 37.500 2.98 0.00 38.11 3.62
2806 5702 6.775142 TGTTTAACTGGAATGTCAGAATGGAA 59.225 34.615 0.00 0.00 38.11 3.53
2807 5703 6.303054 TGTTTAACTGGAATGTCAGAATGGA 58.697 36.000 0.00 0.00 38.11 3.41
2808 5704 6.573664 TGTTTAACTGGAATGTCAGAATGG 57.426 37.500 0.00 0.00 38.11 3.16
2809 5705 7.379529 GTGTTGTTTAACTGGAATGTCAGAATG 59.620 37.037 0.00 0.00 38.11 2.67
2810 5706 7.068103 TGTGTTGTTTAACTGGAATGTCAGAAT 59.932 33.333 0.00 0.00 38.11 2.40
2811 5707 6.375736 TGTGTTGTTTAACTGGAATGTCAGAA 59.624 34.615 0.00 0.00 38.11 3.02
2812 5708 5.883115 TGTGTTGTTTAACTGGAATGTCAGA 59.117 36.000 0.00 0.00 38.11 3.27
2813 5709 6.130298 TGTGTTGTTTAACTGGAATGTCAG 57.870 37.500 0.00 0.00 40.40 3.51
2814 5710 6.516739 TTGTGTTGTTTAACTGGAATGTCA 57.483 33.333 0.00 0.00 37.68 3.58
2815 5711 7.544217 ACTTTTGTGTTGTTTAACTGGAATGTC 59.456 33.333 0.00 0.00 37.68 3.06
2816 5712 7.382898 ACTTTTGTGTTGTTTAACTGGAATGT 58.617 30.769 0.00 0.00 37.68 2.71
2817 5713 7.543868 TGACTTTTGTGTTGTTTAACTGGAATG 59.456 33.333 0.00 0.00 37.68 2.67
2818 5714 7.544217 GTGACTTTTGTGTTGTTTAACTGGAAT 59.456 33.333 0.00 0.00 37.68 3.01
2819 5715 6.864165 GTGACTTTTGTGTTGTTTAACTGGAA 59.136 34.615 0.00 0.00 37.68 3.53
2820 5716 6.207810 AGTGACTTTTGTGTTGTTTAACTGGA 59.792 34.615 0.00 0.00 37.68 3.86
2821 5717 6.386654 AGTGACTTTTGTGTTGTTTAACTGG 58.613 36.000 0.00 0.00 37.68 4.00
2822 5718 7.807907 AGAAGTGACTTTTGTGTTGTTTAACTG 59.192 33.333 0.00 0.00 37.68 3.16
2823 5719 7.882179 AGAAGTGACTTTTGTGTTGTTTAACT 58.118 30.769 0.00 0.00 37.68 2.24
2824 5720 8.515473 AAGAAGTGACTTTTGTGTTGTTTAAC 57.485 30.769 0.00 0.00 37.32 2.01
2825 5721 9.535878 AAAAGAAGTGACTTTTGTGTTGTTTAA 57.464 25.926 0.00 0.00 44.78 1.52
2827 5723 9.535878 TTAAAAGAAGTGACTTTTGTGTTGTTT 57.464 25.926 14.08 0.00 45.61 2.83
2828 5724 9.191995 CTTAAAAGAAGTGACTTTTGTGTTGTT 57.808 29.630 14.08 0.00 45.61 2.83
2829 5725 8.573035 TCTTAAAAGAAGTGACTTTTGTGTTGT 58.427 29.630 14.08 0.00 45.61 3.32
2830 5726 8.964420 TCTTAAAAGAAGTGACTTTTGTGTTG 57.036 30.769 14.08 0.00 45.61 3.33
2845 5741 7.328249 CACTGCACAAAACACTTCTTAAAAGAA 59.672 33.333 5.13 5.13 42.41 2.52
2846 5742 6.806249 CACTGCACAAAACACTTCTTAAAAGA 59.194 34.615 4.94 0.00 0.00 2.52
2847 5743 6.454186 GCACTGCACAAAACACTTCTTAAAAG 60.454 38.462 0.00 0.00 0.00 2.27
2848 5744 5.347364 GCACTGCACAAAACACTTCTTAAAA 59.653 36.000 0.00 0.00 0.00 1.52
2849 5745 4.862018 GCACTGCACAAAACACTTCTTAAA 59.138 37.500 0.00 0.00 0.00 1.52
2850 5746 4.082517 TGCACTGCACAAAACACTTCTTAA 60.083 37.500 0.00 0.00 31.71 1.85
2851 5747 3.441922 TGCACTGCACAAAACACTTCTTA 59.558 39.130 0.00 0.00 31.71 2.10
2852 5748 2.230992 TGCACTGCACAAAACACTTCTT 59.769 40.909 0.00 0.00 31.71 2.52
2853 5749 1.818060 TGCACTGCACAAAACACTTCT 59.182 42.857 0.00 0.00 31.71 2.85
2854 5750 2.276472 TGCACTGCACAAAACACTTC 57.724 45.000 0.00 0.00 31.71 3.01
2875 5771 2.094286 TGGTTGCTGTTGTGACCTTTTG 60.094 45.455 0.00 0.00 33.33 2.44
2876 5772 2.175202 TGGTTGCTGTTGTGACCTTTT 58.825 42.857 0.00 0.00 33.33 2.27
2877 5773 1.846007 TGGTTGCTGTTGTGACCTTT 58.154 45.000 0.00 0.00 33.33 3.11
2878 5774 1.750778 CTTGGTTGCTGTTGTGACCTT 59.249 47.619 0.00 0.00 33.33 3.50
2879 5775 1.340991 ACTTGGTTGCTGTTGTGACCT 60.341 47.619 0.00 0.00 33.33 3.85
2880 5776 1.102978 ACTTGGTTGCTGTTGTGACC 58.897 50.000 0.00 0.00 0.00 4.02
2881 5777 1.742831 TCACTTGGTTGCTGTTGTGAC 59.257 47.619 0.00 0.00 30.78 3.67
2882 5778 2.121291 TCACTTGGTTGCTGTTGTGA 57.879 45.000 0.00 0.00 32.91 3.58
2883 5779 2.937469 TTCACTTGGTTGCTGTTGTG 57.063 45.000 0.00 0.00 0.00 3.33
2884 5780 3.430651 CCATTTCACTTGGTTGCTGTTGT 60.431 43.478 0.00 0.00 0.00 3.32
2885 5781 3.125316 CCATTTCACTTGGTTGCTGTTG 58.875 45.455 0.00 0.00 0.00 3.33
2886 5782 3.030291 TCCATTTCACTTGGTTGCTGTT 58.970 40.909 0.00 0.00 35.64 3.16
2887 5783 2.665165 TCCATTTCACTTGGTTGCTGT 58.335 42.857 0.00 0.00 35.64 4.40
2888 5784 3.947910 ATCCATTTCACTTGGTTGCTG 57.052 42.857 0.00 0.00 35.64 4.41
2889 5785 4.646492 GGATATCCATTTCACTTGGTTGCT 59.354 41.667 17.34 0.00 35.64 3.91
2890 5786 4.202151 GGGATATCCATTTCACTTGGTTGC 60.202 45.833 23.27 0.00 37.91 4.17
2891 5787 5.203528 AGGGATATCCATTTCACTTGGTTG 58.796 41.667 23.27 0.00 38.24 3.77
2892 5788 5.472301 AGGGATATCCATTTCACTTGGTT 57.528 39.130 23.27 0.00 38.24 3.67
2893 5789 6.786843 ATAGGGATATCCATTTCACTTGGT 57.213 37.500 23.27 0.00 38.24 3.67
2894 5790 7.524367 GCAAATAGGGATATCCATTTCACTTGG 60.524 40.741 23.27 9.21 38.24 3.61
2895 5791 7.014518 TGCAAATAGGGATATCCATTTCACTTG 59.985 37.037 23.27 13.11 38.24 3.16
2896 5792 7.014615 GTGCAAATAGGGATATCCATTTCACTT 59.985 37.037 23.27 0.65 38.24 3.16
2897 5793 6.491403 GTGCAAATAGGGATATCCATTTCACT 59.509 38.462 23.27 11.94 38.24 3.41
2898 5794 6.265196 TGTGCAAATAGGGATATCCATTTCAC 59.735 38.462 23.27 23.13 38.24 3.18
2899 5795 6.372104 TGTGCAAATAGGGATATCCATTTCA 58.628 36.000 23.27 15.73 38.24 2.69
2900 5796 6.899393 TGTGCAAATAGGGATATCCATTTC 57.101 37.500 23.27 13.88 38.24 2.17
2901 5797 7.673641 TTTGTGCAAATAGGGATATCCATTT 57.326 32.000 23.27 17.07 38.24 2.32
2902 5798 7.860649 ATTTGTGCAAATAGGGATATCCATT 57.139 32.000 23.27 12.21 39.08 3.16
2914 5810 6.649155 TCCTCTGTAGCTATTTGTGCAAATA 58.351 36.000 14.35 14.35 40.99 1.40
2915 5811 5.500234 TCCTCTGTAGCTATTTGTGCAAAT 58.500 37.500 13.68 13.68 42.95 2.32
2916 5812 4.905429 TCCTCTGTAGCTATTTGTGCAAA 58.095 39.130 0.00 0.00 34.46 3.68
2917 5813 4.551702 TCCTCTGTAGCTATTTGTGCAA 57.448 40.909 0.00 0.00 0.00 4.08
2918 5814 4.551702 TTCCTCTGTAGCTATTTGTGCA 57.448 40.909 0.00 0.00 0.00 4.57
2919 5815 4.695455 TGTTTCCTCTGTAGCTATTTGTGC 59.305 41.667 0.00 0.00 0.00 4.57
2920 5816 5.934625 ACTGTTTCCTCTGTAGCTATTTGTG 59.065 40.000 0.00 0.00 0.00 3.33
2921 5817 6.115448 ACTGTTTCCTCTGTAGCTATTTGT 57.885 37.500 0.00 0.00 0.00 2.83
2922 5818 6.166279 TGACTGTTTCCTCTGTAGCTATTTG 58.834 40.000 0.00 0.00 0.00 2.32
2923 5819 6.211584 TCTGACTGTTTCCTCTGTAGCTATTT 59.788 38.462 0.00 0.00 0.00 1.40
2924 5820 5.717178 TCTGACTGTTTCCTCTGTAGCTATT 59.283 40.000 0.00 0.00 0.00 1.73
2925 5821 5.265191 TCTGACTGTTTCCTCTGTAGCTAT 58.735 41.667 0.00 0.00 0.00 2.97
2926 5822 4.663334 TCTGACTGTTTCCTCTGTAGCTA 58.337 43.478 0.00 0.00 0.00 3.32
2927 5823 3.501349 TCTGACTGTTTCCTCTGTAGCT 58.499 45.455 0.00 0.00 0.00 3.32
2928 5824 3.257127 ACTCTGACTGTTTCCTCTGTAGC 59.743 47.826 0.00 0.00 0.00 3.58
2929 5825 4.764823 AGACTCTGACTGTTTCCTCTGTAG 59.235 45.833 0.00 0.00 0.00 2.74
2930 5826 4.730966 AGACTCTGACTGTTTCCTCTGTA 58.269 43.478 0.00 0.00 0.00 2.74
2931 5827 3.571590 AGACTCTGACTGTTTCCTCTGT 58.428 45.455 0.00 0.00 0.00 3.41
2932 5828 3.571828 TGAGACTCTGACTGTTTCCTCTG 59.428 47.826 3.68 0.00 0.00 3.35
2933 5829 3.838565 TGAGACTCTGACTGTTTCCTCT 58.161 45.455 3.68 0.00 0.00 3.69
2934 5830 4.592485 TTGAGACTCTGACTGTTTCCTC 57.408 45.455 3.68 0.00 0.00 3.71
2935 5831 4.162320 TGTTTGAGACTCTGACTGTTTCCT 59.838 41.667 3.68 0.00 0.00 3.36
2936 5832 4.442706 TGTTTGAGACTCTGACTGTTTCC 58.557 43.478 3.68 0.00 0.00 3.13
2937 5833 6.610741 ATTGTTTGAGACTCTGACTGTTTC 57.389 37.500 3.68 0.00 0.00 2.78
2938 5834 7.552687 TGTAATTGTTTGAGACTCTGACTGTTT 59.447 33.333 3.68 1.93 0.00 2.83
2939 5835 7.047891 TGTAATTGTTTGAGACTCTGACTGTT 58.952 34.615 3.68 4.84 0.00 3.16
2940 5836 6.582636 TGTAATTGTTTGAGACTCTGACTGT 58.417 36.000 3.68 0.00 0.00 3.55
2941 5837 7.482654 TTGTAATTGTTTGAGACTCTGACTG 57.517 36.000 3.68 0.00 0.00 3.51
2942 5838 6.203723 GCTTGTAATTGTTTGAGACTCTGACT 59.796 38.462 3.68 0.00 0.00 3.41
2943 5839 6.017934 TGCTTGTAATTGTTTGAGACTCTGAC 60.018 38.462 3.68 3.21 0.00 3.51
2944 5840 6.054941 TGCTTGTAATTGTTTGAGACTCTGA 58.945 36.000 3.68 0.00 0.00 3.27
2945 5841 6.304356 TGCTTGTAATTGTTTGAGACTCTG 57.696 37.500 3.68 0.00 0.00 3.35
2946 5842 6.942532 TTGCTTGTAATTGTTTGAGACTCT 57.057 33.333 3.68 0.00 0.00 3.24
2947 5843 7.985634 TTTTGCTTGTAATTGTTTGAGACTC 57.014 32.000 0.00 0.00 0.00 3.36
2948 5844 7.816995 TGTTTTTGCTTGTAATTGTTTGAGACT 59.183 29.630 0.00 0.00 0.00 3.24
2949 5845 7.958674 TGTTTTTGCTTGTAATTGTTTGAGAC 58.041 30.769 0.00 0.00 0.00 3.36
2950 5846 8.715191 ATGTTTTTGCTTGTAATTGTTTGAGA 57.285 26.923 0.00 0.00 0.00 3.27
2951 5847 9.771915 AAATGTTTTTGCTTGTAATTGTTTGAG 57.228 25.926 0.00 0.00 0.00 3.02
2952 5848 9.552114 CAAATGTTTTTGCTTGTAATTGTTTGA 57.448 25.926 0.00 0.00 36.13 2.69
2953 5849 8.796278 CCAAATGTTTTTGCTTGTAATTGTTTG 58.204 29.630 0.00 0.00 40.77 2.93
2954 5850 8.734386 TCCAAATGTTTTTGCTTGTAATTGTTT 58.266 25.926 0.00 0.00 40.77 2.83
2955 5851 8.273780 TCCAAATGTTTTTGCTTGTAATTGTT 57.726 26.923 0.00 0.00 40.77 2.83
2956 5852 7.856145 TCCAAATGTTTTTGCTTGTAATTGT 57.144 28.000 0.00 0.00 40.77 2.71
2960 5856 9.606631 AGTTTATCCAAATGTTTTTGCTTGTAA 57.393 25.926 0.00 0.00 40.77 2.41
2961 5857 9.606631 AAGTTTATCCAAATGTTTTTGCTTGTA 57.393 25.926 0.00 0.00 40.77 2.41
2962 5858 8.397148 CAAGTTTATCCAAATGTTTTTGCTTGT 58.603 29.630 0.00 0.00 40.77 3.16
2963 5859 8.397148 ACAAGTTTATCCAAATGTTTTTGCTTG 58.603 29.630 0.00 0.00 40.77 4.01
2964 5860 8.504812 ACAAGTTTATCCAAATGTTTTTGCTT 57.495 26.923 0.00 0.00 40.77 3.91
2965 5861 7.768120 TGACAAGTTTATCCAAATGTTTTTGCT 59.232 29.630 0.00 0.00 40.77 3.91
2966 5862 7.914465 TGACAAGTTTATCCAAATGTTTTTGC 58.086 30.769 0.00 0.00 40.77 3.68
2967 5863 9.866936 CATGACAAGTTTATCCAAATGTTTTTG 57.133 29.630 0.00 0.00 41.59 2.44
2968 5864 9.054922 CCATGACAAGTTTATCCAAATGTTTTT 57.945 29.630 0.00 0.00 0.00 1.94
2969 5865 7.173047 GCCATGACAAGTTTATCCAAATGTTTT 59.827 33.333 0.00 0.00 0.00 2.43
2970 5866 6.650390 GCCATGACAAGTTTATCCAAATGTTT 59.350 34.615 0.00 0.00 0.00 2.83
2971 5867 6.014327 AGCCATGACAAGTTTATCCAAATGTT 60.014 34.615 0.00 0.00 0.00 2.71
2972 5868 5.481473 AGCCATGACAAGTTTATCCAAATGT 59.519 36.000 0.00 0.00 0.00 2.71
2973 5869 5.969423 AGCCATGACAAGTTTATCCAAATG 58.031 37.500 0.00 0.00 0.00 2.32
2974 5870 6.610075 AAGCCATGACAAGTTTATCCAAAT 57.390 33.333 0.00 0.00 0.00 2.32
2975 5871 7.716799 ATAAGCCATGACAAGTTTATCCAAA 57.283 32.000 0.00 0.00 0.00 3.28
2976 5872 8.682710 GTTATAAGCCATGACAAGTTTATCCAA 58.317 33.333 0.00 0.00 0.00 3.53
2977 5873 7.831690 TGTTATAAGCCATGACAAGTTTATCCA 59.168 33.333 0.00 0.00 30.68 3.41
2978 5874 8.220755 TGTTATAAGCCATGACAAGTTTATCC 57.779 34.615 0.00 0.00 30.68 2.59
2979 5875 8.893727 ACTGTTATAAGCCATGACAAGTTTATC 58.106 33.333 0.00 0.00 33.15 1.75
2980 5876 8.677300 CACTGTTATAAGCCATGACAAGTTTAT 58.323 33.333 0.00 0.00 33.15 1.40
2981 5877 7.120579 CCACTGTTATAAGCCATGACAAGTTTA 59.879 37.037 0.00 0.00 33.15 2.01
2982 5878 6.071952 CCACTGTTATAAGCCATGACAAGTTT 60.072 38.462 0.00 0.00 33.15 2.66
2983 5879 5.415701 CCACTGTTATAAGCCATGACAAGTT 59.584 40.000 0.00 0.00 33.15 2.66
2984 5880 4.943705 CCACTGTTATAAGCCATGACAAGT 59.056 41.667 0.00 0.00 33.15 3.16
2985 5881 4.201950 GCCACTGTTATAAGCCATGACAAG 60.202 45.833 0.00 0.00 33.15 3.16
2986 5882 3.694072 GCCACTGTTATAAGCCATGACAA 59.306 43.478 0.00 0.00 33.15 3.18
2987 5883 3.278574 GCCACTGTTATAAGCCATGACA 58.721 45.455 0.00 0.00 32.60 3.58
2988 5884 3.278574 TGCCACTGTTATAAGCCATGAC 58.721 45.455 0.00 0.00 0.00 3.06
2989 5885 3.643199 TGCCACTGTTATAAGCCATGA 57.357 42.857 0.00 0.00 0.00 3.07
2990 5886 3.005050 CCATGCCACTGTTATAAGCCATG 59.995 47.826 0.00 0.00 0.00 3.66
2991 5887 3.225104 CCATGCCACTGTTATAAGCCAT 58.775 45.455 0.00 0.00 0.00 4.40
2992 5888 2.653726 CCATGCCACTGTTATAAGCCA 58.346 47.619 0.00 0.00 0.00 4.75
2993 5889 1.338020 GCCATGCCACTGTTATAAGCC 59.662 52.381 0.00 0.00 0.00 4.35
2994 5890 2.301346 AGCCATGCCACTGTTATAAGC 58.699 47.619 0.00 0.00 0.00 3.09
2995 5891 3.947196 TGAAGCCATGCCACTGTTATAAG 59.053 43.478 0.00 0.00 0.00 1.73
2996 5892 3.961849 TGAAGCCATGCCACTGTTATAA 58.038 40.909 0.00 0.00 0.00 0.98
2997 5893 3.643199 TGAAGCCATGCCACTGTTATA 57.357 42.857 0.00 0.00 0.00 0.98
2998 5894 2.512692 TGAAGCCATGCCACTGTTAT 57.487 45.000 0.00 0.00 0.00 1.89
2999 5895 2.512692 ATGAAGCCATGCCACTGTTA 57.487 45.000 0.00 0.00 0.00 2.41
3000 5896 1.636148 AATGAAGCCATGCCACTGTT 58.364 45.000 0.00 0.00 32.36 3.16
3001 5897 1.636148 AAATGAAGCCATGCCACTGT 58.364 45.000 0.00 0.00 32.36 3.55
3002 5898 2.754946 AAAATGAAGCCATGCCACTG 57.245 45.000 0.00 0.00 32.36 3.66
3003 5899 2.497273 GGTAAAATGAAGCCATGCCACT 59.503 45.455 0.00 0.00 32.36 4.00
3004 5900 2.233431 TGGTAAAATGAAGCCATGCCAC 59.767 45.455 0.00 0.00 32.36 5.01
3005 5901 2.496871 CTGGTAAAATGAAGCCATGCCA 59.503 45.455 0.00 0.00 32.36 4.92
3006 5902 2.159057 CCTGGTAAAATGAAGCCATGCC 60.159 50.000 0.00 0.00 32.36 4.40
3007 5903 2.159057 CCCTGGTAAAATGAAGCCATGC 60.159 50.000 0.00 0.00 32.36 4.06
3008 5904 2.431782 CCCCTGGTAAAATGAAGCCATG 59.568 50.000 0.00 0.00 32.36 3.66
3009 5905 2.750814 CCCCTGGTAAAATGAAGCCAT 58.249 47.619 0.00 0.00 33.66 4.40
3010 5906 1.894978 GCCCCTGGTAAAATGAAGCCA 60.895 52.381 0.00 0.00 0.00 4.75
3011 5907 0.824109 GCCCCTGGTAAAATGAAGCC 59.176 55.000 0.00 0.00 0.00 4.35
3012 5908 1.555967 TGCCCCTGGTAAAATGAAGC 58.444 50.000 0.00 0.00 0.00 3.86
3013 5909 4.709397 TGTAATGCCCCTGGTAAAATGAAG 59.291 41.667 0.00 0.00 0.00 3.02
3014 5910 4.678256 TGTAATGCCCCTGGTAAAATGAA 58.322 39.130 0.00 0.00 0.00 2.57
3015 5911 4.323569 TGTAATGCCCCTGGTAAAATGA 57.676 40.909 0.00 0.00 0.00 2.57
3016 5912 5.612725 AATGTAATGCCCCTGGTAAAATG 57.387 39.130 0.00 0.00 0.00 2.32
3017 5913 7.129425 TCTTAATGTAATGCCCCTGGTAAAAT 58.871 34.615 0.00 0.00 0.00 1.82
3018 5914 6.494952 TCTTAATGTAATGCCCCTGGTAAAA 58.505 36.000 0.00 0.00 0.00 1.52
3019 5915 6.080969 TCTTAATGTAATGCCCCTGGTAAA 57.919 37.500 0.00 0.00 0.00 2.01
3020 5916 5.718801 TCTTAATGTAATGCCCCTGGTAA 57.281 39.130 0.00 0.00 0.00 2.85
3021 5917 5.044772 TGTTCTTAATGTAATGCCCCTGGTA 60.045 40.000 0.00 0.00 0.00 3.25
3022 5918 4.264172 TGTTCTTAATGTAATGCCCCTGGT 60.264 41.667 0.00 0.00 0.00 4.00
3023 5919 4.277476 TGTTCTTAATGTAATGCCCCTGG 58.723 43.478 0.00 0.00 0.00 4.45
3024 5920 4.202050 GCTGTTCTTAATGTAATGCCCCTG 60.202 45.833 0.00 0.00 0.00 4.45
3025 5921 3.954258 GCTGTTCTTAATGTAATGCCCCT 59.046 43.478 0.00 0.00 0.00 4.79
3026 5922 3.954258 AGCTGTTCTTAATGTAATGCCCC 59.046 43.478 0.00 0.00 0.00 5.80
3027 5923 6.693315 TTAGCTGTTCTTAATGTAATGCCC 57.307 37.500 0.00 0.00 0.00 5.36
3040 5936 9.574516 CCCTTATACCAAATATTTAGCTGTTCT 57.425 33.333 0.00 0.00 0.00 3.01
3041 5937 8.297426 GCCCTTATACCAAATATTTAGCTGTTC 58.703 37.037 0.00 0.00 0.00 3.18
3042 5938 7.782644 TGCCCTTATACCAAATATTTAGCTGTT 59.217 33.333 0.00 0.00 0.00 3.16
3043 5939 7.294584 TGCCCTTATACCAAATATTTAGCTGT 58.705 34.615 0.00 0.00 0.00 4.40
3044 5940 7.759489 TGCCCTTATACCAAATATTTAGCTG 57.241 36.000 0.00 0.00 0.00 4.24
3045 5941 7.397192 CCATGCCCTTATACCAAATATTTAGCT 59.603 37.037 0.00 0.00 0.00 3.32
3046 5942 7.363793 CCCATGCCCTTATACCAAATATTTAGC 60.364 40.741 0.00 0.00 0.00 3.09
3047 5943 7.893302 TCCCATGCCCTTATACCAAATATTTAG 59.107 37.037 0.00 0.00 0.00 1.85
3048 5944 7.672239 GTCCCATGCCCTTATACCAAATATTTA 59.328 37.037 0.00 0.00 0.00 1.40
3049 5945 6.496911 GTCCCATGCCCTTATACCAAATATTT 59.503 38.462 0.00 0.00 0.00 1.40
3050 5946 6.016555 GTCCCATGCCCTTATACCAAATATT 58.983 40.000 0.00 0.00 0.00 1.28
3051 5947 5.075761 TGTCCCATGCCCTTATACCAAATAT 59.924 40.000 0.00 0.00 0.00 1.28
3052 5948 4.417183 TGTCCCATGCCCTTATACCAAATA 59.583 41.667 0.00 0.00 0.00 1.40
3053 5949 3.206412 TGTCCCATGCCCTTATACCAAAT 59.794 43.478 0.00 0.00 0.00 2.32
3054 5950 2.583101 TGTCCCATGCCCTTATACCAAA 59.417 45.455 0.00 0.00 0.00 3.28
3055 5951 2.209758 TGTCCCATGCCCTTATACCAA 58.790 47.619 0.00 0.00 0.00 3.67
3056 5952 1.900254 TGTCCCATGCCCTTATACCA 58.100 50.000 0.00 0.00 0.00 3.25
3057 5953 3.157087 CATTGTCCCATGCCCTTATACC 58.843 50.000 0.00 0.00 0.00 2.73
3058 5954 3.157087 CCATTGTCCCATGCCCTTATAC 58.843 50.000 0.00 0.00 0.00 1.47
3059 5955 2.109834 CCCATTGTCCCATGCCCTTATA 59.890 50.000 0.00 0.00 0.00 0.98
3060 5956 1.133072 CCCATTGTCCCATGCCCTTAT 60.133 52.381 0.00 0.00 0.00 1.73
3061 5957 0.261402 CCCATTGTCCCATGCCCTTA 59.739 55.000 0.00 0.00 0.00 2.69
3062 5958 1.002017 CCCATTGTCCCATGCCCTT 59.998 57.895 0.00 0.00 0.00 3.95
3063 5959 2.248374 ACCCATTGTCCCATGCCCT 61.248 57.895 0.00 0.00 0.00 5.19
3064 5960 2.059786 CACCCATTGTCCCATGCCC 61.060 63.158 0.00 0.00 0.00 5.36
3065 5961 2.724273 GCACCCATTGTCCCATGCC 61.724 63.158 0.00 0.00 0.00 4.40
3066 5962 1.983481 TGCACCCATTGTCCCATGC 60.983 57.895 0.00 0.00 0.00 4.06
3067 5963 1.606885 GGTGCACCCATTGTCCCATG 61.607 60.000 26.31 0.00 0.00 3.66
3068 5964 1.305213 GGTGCACCCATTGTCCCAT 60.305 57.895 26.31 0.00 0.00 4.00
3069 5965 2.117206 GGTGCACCCATTGTCCCA 59.883 61.111 26.31 0.00 0.00 4.37
3070 5966 1.978617 CTGGTGCACCCATTGTCCC 60.979 63.158 32.62 5.24 44.15 4.46
3071 5967 2.639327 GCTGGTGCACCCATTGTCC 61.639 63.158 32.62 6.06 44.15 4.02
3072 5968 1.870055 CTGCTGGTGCACCCATTGTC 61.870 60.000 32.62 14.85 45.31 3.18
3073 5969 1.904865 CTGCTGGTGCACCCATTGT 60.905 57.895 32.62 0.00 45.31 2.71
3074 5970 1.870055 GACTGCTGGTGCACCCATTG 61.870 60.000 32.62 21.22 45.31 2.82
3075 5971 1.604593 GACTGCTGGTGCACCCATT 60.605 57.895 32.62 18.05 45.31 3.16
3076 5972 2.034687 GACTGCTGGTGCACCCAT 59.965 61.111 32.62 13.47 45.31 4.00
3077 5973 4.269523 GGACTGCTGGTGCACCCA 62.270 66.667 32.62 22.34 45.31 4.51
3078 5974 4.269523 TGGACTGCTGGTGCACCC 62.270 66.667 32.62 18.79 45.31 4.61
3079 5975 2.670934 CTGGACTGCTGGTGCACC 60.671 66.667 29.67 29.67 45.31 5.01
3080 5976 3.360340 GCTGGACTGCTGGTGCAC 61.360 66.667 8.80 8.80 45.31 4.57
3082 5978 3.360340 GTGCTGGACTGCTGGTGC 61.360 66.667 2.94 0.00 40.20 5.01
3083 5979 2.670934 GGTGCTGGACTGCTGGTG 60.671 66.667 0.00 0.00 0.00 4.17
3084 5980 2.532532 ATGGTGCTGGACTGCTGGT 61.533 57.895 0.00 0.00 0.00 4.00
3085 5981 2.044555 CATGGTGCTGGACTGCTGG 61.045 63.158 0.00 0.00 0.00 4.85
3086 5982 0.036105 TACATGGTGCTGGACTGCTG 60.036 55.000 0.00 0.00 0.00 4.41
3087 5983 0.036010 GTACATGGTGCTGGACTGCT 60.036 55.000 0.00 0.00 0.00 4.24
3088 5984 1.026718 GGTACATGGTGCTGGACTGC 61.027 60.000 0.00 0.00 30.23 4.40
3089 5985 0.615331 AGGTACATGGTGCTGGACTG 59.385 55.000 0.00 0.00 30.23 3.51
3090 5986 2.247699 TAGGTACATGGTGCTGGACT 57.752 50.000 0.00 0.00 30.23 3.85
3091 5987 3.007635 GTTTAGGTACATGGTGCTGGAC 58.992 50.000 0.00 0.00 0.00 4.02
3092 5988 2.910319 AGTTTAGGTACATGGTGCTGGA 59.090 45.455 0.00 0.00 0.00 3.86
3093 5989 3.009723 CAGTTTAGGTACATGGTGCTGG 58.990 50.000 0.00 0.00 0.00 4.85
3094 5990 3.935203 CTCAGTTTAGGTACATGGTGCTG 59.065 47.826 0.00 0.00 0.00 4.41
3095 5991 3.055094 CCTCAGTTTAGGTACATGGTGCT 60.055 47.826 0.00 0.00 31.46 4.40
3096 5992 3.270877 CCTCAGTTTAGGTACATGGTGC 58.729 50.000 0.00 0.00 31.46 5.01
3097 5993 3.270877 GCCTCAGTTTAGGTACATGGTG 58.729 50.000 0.00 0.00 39.02 4.17
3098 5994 2.910319 TGCCTCAGTTTAGGTACATGGT 59.090 45.455 0.00 0.00 39.02 3.55
3099 5995 3.627395 TGCCTCAGTTTAGGTACATGG 57.373 47.619 0.00 0.00 39.02 3.66
3100 5996 6.823689 ACTTTATGCCTCAGTTTAGGTACATG 59.176 38.462 0.00 0.00 39.02 3.21
3101 5997 6.823689 CACTTTATGCCTCAGTTTAGGTACAT 59.176 38.462 0.00 0.00 39.02 2.29
3102 5998 6.170506 CACTTTATGCCTCAGTTTAGGTACA 58.829 40.000 0.00 0.00 39.02 2.90
3103 5999 5.585047 CCACTTTATGCCTCAGTTTAGGTAC 59.415 44.000 0.00 0.00 39.02 3.34
3104 6000 5.249852 ACCACTTTATGCCTCAGTTTAGGTA 59.750 40.000 0.00 0.00 39.02 3.08
3105 6001 4.042934 ACCACTTTATGCCTCAGTTTAGGT 59.957 41.667 0.00 0.00 39.02 3.08
3106 6002 4.396166 CACCACTTTATGCCTCAGTTTAGG 59.604 45.833 0.00 0.00 39.87 2.69
3107 6003 5.245531 TCACCACTTTATGCCTCAGTTTAG 58.754 41.667 0.00 0.00 0.00 1.85
3108 6004 5.235850 TCACCACTTTATGCCTCAGTTTA 57.764 39.130 0.00 0.00 0.00 2.01
3109 6005 4.098914 TCACCACTTTATGCCTCAGTTT 57.901 40.909 0.00 0.00 0.00 2.66
3110 6006 3.788227 TCACCACTTTATGCCTCAGTT 57.212 42.857 0.00 0.00 0.00 3.16
3111 6007 4.263462 TGAATCACCACTTTATGCCTCAGT 60.263 41.667 0.00 0.00 0.00 3.41
3112 6008 4.264253 TGAATCACCACTTTATGCCTCAG 58.736 43.478 0.00 0.00 0.00 3.35
3113 6009 4.019411 TCTGAATCACCACTTTATGCCTCA 60.019 41.667 0.00 0.00 0.00 3.86
3114 6010 4.517285 TCTGAATCACCACTTTATGCCTC 58.483 43.478 0.00 0.00 0.00 4.70
3115 6011 4.018960 ACTCTGAATCACCACTTTATGCCT 60.019 41.667 0.00 0.00 0.00 4.75
3116 6012 4.265073 ACTCTGAATCACCACTTTATGCC 58.735 43.478 0.00 0.00 0.00 4.40
3117 6013 5.886960 AACTCTGAATCACCACTTTATGC 57.113 39.130 0.00 0.00 0.00 3.14
3118 6014 7.206981 ACAAACTCTGAATCACCACTTTATG 57.793 36.000 0.00 0.00 0.00 1.90
3119 6015 7.823745 AACAAACTCTGAATCACCACTTTAT 57.176 32.000 0.00 0.00 0.00 1.40
3120 6016 7.227910 GGTAACAAACTCTGAATCACCACTTTA 59.772 37.037 0.00 0.00 0.00 1.85
3121 6017 6.039382 GGTAACAAACTCTGAATCACCACTTT 59.961 38.462 0.00 0.00 0.00 2.66
3122 6018 5.531287 GGTAACAAACTCTGAATCACCACTT 59.469 40.000 0.00 0.00 0.00 3.16
3123 6019 5.063880 GGTAACAAACTCTGAATCACCACT 58.936 41.667 0.00 0.00 0.00 4.00
3124 6020 4.215613 GGGTAACAAACTCTGAATCACCAC 59.784 45.833 0.00 0.00 39.74 4.16
3125 6021 4.394729 GGGTAACAAACTCTGAATCACCA 58.605 43.478 0.00 0.00 39.74 4.17
3126 6022 3.756963 GGGGTAACAAACTCTGAATCACC 59.243 47.826 0.00 0.00 39.74 4.02
3127 6023 3.435671 CGGGGTAACAAACTCTGAATCAC 59.564 47.826 0.00 0.00 37.07 3.06
3128 6024 3.558321 CCGGGGTAACAAACTCTGAATCA 60.558 47.826 0.00 0.00 37.07 2.57
3129 6025 3.007635 CCGGGGTAACAAACTCTGAATC 58.992 50.000 0.00 0.00 37.07 2.52
3130 6026 2.290705 CCCGGGGTAACAAACTCTGAAT 60.291 50.000 14.71 0.00 37.07 2.57
3131 6027 1.072648 CCCGGGGTAACAAACTCTGAA 59.927 52.381 14.71 0.00 37.07 3.02
3132 6028 0.688487 CCCGGGGTAACAAACTCTGA 59.312 55.000 14.71 0.00 37.07 3.27
3133 6029 0.688487 TCCCGGGGTAACAAACTCTG 59.312 55.000 23.50 0.00 34.34 3.35
3134 6030 1.437397 TTCCCGGGGTAACAAACTCT 58.563 50.000 23.50 0.00 39.74 3.24
3135 6031 1.881973 GTTTCCCGGGGTAACAAACTC 59.118 52.381 25.47 0.00 33.98 3.01
3136 6032 1.214923 TGTTTCCCGGGGTAACAAACT 59.785 47.619 29.31 0.00 39.38 2.66
3137 6033 1.689984 TGTTTCCCGGGGTAACAAAC 58.310 50.000 29.31 25.46 39.38 2.93
3138 6034 2.449137 TTGTTTCCCGGGGTAACAAA 57.551 45.000 34.94 23.50 45.24 2.83
3139 6035 2.030371 GTTTGTTTCCCGGGGTAACAA 58.970 47.619 34.01 34.01 46.04 2.83
3140 6036 1.064166 TGTTTGTTTCCCGGGGTAACA 60.064 47.619 28.20 28.20 40.30 2.41
3141 6037 1.689984 TGTTTGTTTCCCGGGGTAAC 58.310 50.000 24.16 24.16 34.31 2.50
3142 6038 2.516906 GATGTTTGTTTCCCGGGGTAA 58.483 47.619 23.50 13.01 0.00 2.85
3143 6039 1.272037 GGATGTTTGTTTCCCGGGGTA 60.272 52.381 23.50 6.35 0.00 3.69
3144 6040 0.541063 GGATGTTTGTTTCCCGGGGT 60.541 55.000 23.50 0.00 0.00 4.95
3145 6041 0.540830 TGGATGTTTGTTTCCCGGGG 60.541 55.000 23.50 6.77 0.00 5.73
3146 6042 1.333177 TTGGATGTTTGTTTCCCGGG 58.667 50.000 16.85 16.85 0.00 5.73
3147 6043 4.792521 TTATTGGATGTTTGTTTCCCGG 57.207 40.909 0.00 0.00 0.00 5.73
3148 6044 5.533482 TGTTTATTGGATGTTTGTTTCCCG 58.467 37.500 0.00 0.00 0.00 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.