Multiple sequence alignment - TraesCS3A01G217900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G217900 chr3A 100.000 8727 0 0 1 8727 399581158 399572432 0.000000e+00 16116.0
1 TraesCS3A01G217900 chr3A 99.283 279 2 0 310 588 388093818 388094096 1.010000e-138 505.0
2 TraesCS3A01G217900 chr3A 76.786 728 143 18 4954 5660 399887119 399886397 1.370000e-102 385.0
3 TraesCS3A01G217900 chr3A 77.345 693 129 21 4984 5656 501931393 501930709 1.370000e-102 385.0
4 TraesCS3A01G217900 chr3A 100.000 29 0 0 1298 1326 513931331 513931303 4.000000e-03 54.7
5 TraesCS3A01G217900 chr3B 97.863 5663 107 8 586 6247 395859288 395853639 0.000000e+00 9775.0
6 TraesCS3A01G217900 chr3B 98.058 1596 29 2 6258 7851 395853489 395851894 0.000000e+00 2774.0
7 TraesCS3A01G217900 chr3B 98.925 279 3 0 310 588 474033063 474033341 4.700000e-137 499.0
8 TraesCS3A01G217900 chr3B 89.896 386 19 6 8343 8726 395837974 395837607 6.130000e-131 479.0
9 TraesCS3A01G217900 chr3B 89.344 366 24 12 7956 8308 395838340 395837977 6.220000e-121 446.0
10 TraesCS3A01G217900 chr3B 76.902 723 146 16 4954 5657 395912465 395911745 2.950000e-104 390.0
11 TraesCS3A01G217900 chr3B 95.376 173 7 1 7847 8019 395851773 395851602 3.100000e-69 274.0
12 TraesCS3A01G217900 chr3D 96.833 5746 107 23 586 6315 323327255 323332941 0.000000e+00 9533.0
13 TraesCS3A01G217900 chr3D 95.736 2439 77 14 6299 8727 323332957 323335378 0.000000e+00 3903.0
14 TraesCS3A01G217900 chr3D 90.031 321 23 6 4 318 323326946 323327263 2.930000e-109 407.0
15 TraesCS3A01G217900 chr3D 76.902 723 146 16 4954 5657 323261631 323262351 2.950000e-104 390.0
16 TraesCS3A01G217900 chr3D 77.259 686 130 20 4990 5656 377885592 377884914 6.390000e-101 379.0
17 TraesCS3A01G217900 chr3D 84.685 111 13 3 1237 1345 377894522 377894414 3.330000e-19 108.0
18 TraesCS3A01G217900 chr7A 99.281 278 2 0 312 589 78662944 78662667 3.640000e-138 503.0
19 TraesCS3A01G217900 chr7A 98.909 275 3 0 312 586 14291573 14291847 7.870000e-135 492.0
20 TraesCS3A01G217900 chr7A 82.692 156 27 0 7211 7366 567380832 567380987 1.180000e-28 139.0
21 TraesCS3A01G217900 chr6B 97.578 289 6 1 301 588 565748434 565748146 2.190000e-135 494.0
22 TraesCS3A01G217900 chr6B 83.495 103 15 2 1062 1162 258006318 258006420 2.590000e-15 95.3
23 TraesCS3A01G217900 chr4A 98.566 279 3 1 310 588 16241208 16241485 7.870000e-135 492.0
24 TraesCS3A01G217900 chr2B 98.221 281 5 0 310 590 778840332 778840612 7.870000e-135 492.0
25 TraesCS3A01G217900 chr4B 97.544 285 6 1 309 593 608622832 608622549 3.660000e-133 486.0
26 TraesCS3A01G217900 chr2A 97.535 284 6 1 310 593 768260230 768259948 1.320000e-132 484.0
27 TraesCS3A01G217900 chr2A 77.870 723 139 16 4954 5657 719278332 719279052 6.260000e-116 429.0
28 TraesCS3A01G217900 chr7D 82.051 156 28 0 7211 7366 500894259 500894414 5.500000e-27 134.0
29 TraesCS3A01G217900 chr7B 82.051 156 28 0 7211 7366 529675333 529675488 5.500000e-27 134.0
30 TraesCS3A01G217900 chr7B 81.982 111 19 1 7898 8007 612635082 612634972 9.330000e-15 93.5
31 TraesCS3A01G217900 chr7B 87.097 62 8 0 1095 1156 498254190 498254251 4.370000e-08 71.3
32 TraesCS3A01G217900 chr5B 91.667 96 8 0 1068 1163 334060689 334060594 5.500000e-27 134.0
33 TraesCS3A01G217900 chr5B 78.919 185 30 6 7909 8086 137108610 137108428 5.540000e-22 117.0
34 TraesCS3A01G217900 chrUn 80.769 156 30 0 7211 7366 86627515 86627670 1.190000e-23 122.0
35 TraesCS3A01G217900 chr6D 75.083 301 56 13 1062 1359 147156206 147155922 1.190000e-23 122.0
36 TraesCS3A01G217900 chr5D 89.583 96 10 0 1068 1163 292775786 292775691 1.190000e-23 122.0
37 TraesCS3A01G217900 chr5D 74.390 246 55 6 8420 8661 245175583 245175342 2.010000e-16 99.0
38 TraesCS3A01G217900 chr5A 79.348 184 30 3 7917 8092 680523536 680523353 1.190000e-23 122.0
39 TraesCS3A01G217900 chr6A 75.172 290 54 12 1072 1359 200247720 200247993 4.280000e-23 121.0
40 TraesCS3A01G217900 chr6A 72.937 303 73 7 8423 8723 380330778 380331073 7.210000e-16 97.1
41 TraesCS3A01G217900 chr1A 77.895 95 21 0 7916 8010 493630429 493630335 9.460000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G217900 chr3A 399572432 399581158 8726 True 16116.000000 16116 100.000 1 8727 1 chr3A.!!$R1 8726
1 TraesCS3A01G217900 chr3A 399886397 399887119 722 True 385.000000 385 76.786 4954 5660 1 chr3A.!!$R2 706
2 TraesCS3A01G217900 chr3A 501930709 501931393 684 True 385.000000 385 77.345 4984 5656 1 chr3A.!!$R3 672
3 TraesCS3A01G217900 chr3B 395851602 395859288 7686 True 4274.333333 9775 97.099 586 8019 3 chr3B.!!$R3 7433
4 TraesCS3A01G217900 chr3B 395837607 395838340 733 True 462.500000 479 89.620 7956 8726 2 chr3B.!!$R2 770
5 TraesCS3A01G217900 chr3B 395911745 395912465 720 True 390.000000 390 76.902 4954 5657 1 chr3B.!!$R1 703
6 TraesCS3A01G217900 chr3D 323326946 323335378 8432 False 4614.333333 9533 94.200 4 8727 3 chr3D.!!$F2 8723
7 TraesCS3A01G217900 chr3D 323261631 323262351 720 False 390.000000 390 76.902 4954 5657 1 chr3D.!!$F1 703
8 TraesCS3A01G217900 chr3D 377884914 377885592 678 True 379.000000 379 77.259 4990 5656 1 chr3D.!!$R1 666
9 TraesCS3A01G217900 chr2A 719278332 719279052 720 False 429.000000 429 77.870 4954 5657 1 chr2A.!!$F1 703

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
445 452 0.034756 CCGGAACATCACACACTCCA 59.965 55.000 0.00 0.00 0.00 3.86 F
1606 1624 0.043053 CGTTTGTGTCTCAGCGTGTG 60.043 55.000 0.00 0.00 0.00 3.82 F
3263 3293 0.243365 CAAAAGCAATACTGGGCGCA 59.757 50.000 10.83 2.47 34.54 6.09 F
3590 3620 1.605710 GGCATGACGAATTCCCTCATG 59.394 52.381 24.24 24.24 42.82 3.07 F
3787 3817 2.435805 ACCTGTGTTCTTCAAGCAGAGA 59.564 45.455 0.00 0.00 0.00 3.10 F
4701 4731 1.002087 GAACGGTGAGGTTCTGGACAT 59.998 52.381 0.00 0.00 42.33 3.06 F
6080 6127 1.929836 CGGTCAAGAACAGATGCTAGC 59.070 52.381 8.10 8.10 0.00 3.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1795 1813 0.248661 GCAAGCAGAGCATGAGCATG 60.249 55.000 6.11 6.11 45.49 4.06 R
3357 3387 0.035317 TGCTCTTGTCGAATGGCACT 59.965 50.000 0.00 0.00 0.00 4.40 R
4524 4554 0.321919 GCATGCACTCACCCTTCAGA 60.322 55.000 14.21 0.00 0.00 3.27 R
4701 4731 0.617935 TGGTGATTCCAGGCGATCAA 59.382 50.000 6.85 0.00 41.93 2.57 R
5665 5712 2.166459 TGGTAGAAATCTCCGCTGTGAG 59.834 50.000 0.00 0.00 0.00 3.51 R
6631 6869 1.602888 CTGCTTCCACAGGCAAGCT 60.603 57.895 15.85 0.00 44.59 3.74 R
7959 8323 0.958382 TGCCCGTGGTATTGAGTTGC 60.958 55.000 0.00 0.00 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
90 91 9.144298 AGGTAAGAATTTTCCATCGAGTATAGA 57.856 33.333 0.00 0.00 0.00 1.98
151 153 9.968870 ATTCCTACTCACGTAGAAATAGAAATC 57.031 33.333 0.00 0.00 44.77 2.17
152 154 7.637229 TCCTACTCACGTAGAAATAGAAATCG 58.363 38.462 0.00 0.00 44.77 3.34
158 160 7.713750 TCACGTAGAAATAGAAATCGATTCCT 58.286 34.615 11.83 6.62 38.94 3.36
159 161 8.843262 TCACGTAGAAATAGAAATCGATTCCTA 58.157 33.333 11.83 9.07 38.94 2.94
178 180 1.846007 ATACAAATCAAAGGGCGCCA 58.154 45.000 30.85 7.48 0.00 5.69
193 195 1.668237 GCGCCAGAGAAAATCTTCCTC 59.332 52.381 0.00 0.00 35.47 3.71
222 224 9.508721 AGAATTCCTACTAAAATCCTTCCTACT 57.491 33.333 0.65 0.00 0.00 2.57
223 225 9.767228 GAATTCCTACTAAAATCCTTCCTACTC 57.233 37.037 0.00 0.00 0.00 2.59
225 227 7.899648 TCCTACTAAAATCCTTCCTACTCAG 57.100 40.000 0.00 0.00 0.00 3.35
226 228 6.324254 TCCTACTAAAATCCTTCCTACTCAGC 59.676 42.308 0.00 0.00 0.00 4.26
227 229 5.012328 ACTAAAATCCTTCCTACTCAGCG 57.988 43.478 0.00 0.00 0.00 5.18
228 230 2.990066 AAATCCTTCCTACTCAGCGG 57.010 50.000 0.00 0.00 0.00 5.52
229 231 0.466124 AATCCTTCCTACTCAGCGGC 59.534 55.000 0.00 0.00 0.00 6.53
281 288 6.877611 ATGCTGGGAAATAAATACTTACGG 57.122 37.500 0.00 0.00 0.00 4.02
320 327 2.662596 CGCAGGTAAGGCTGGTCA 59.337 61.111 0.00 0.00 0.00 4.02
321 328 1.741770 CGCAGGTAAGGCTGGTCAC 60.742 63.158 0.00 0.00 0.00 3.67
322 329 1.374947 GCAGGTAAGGCTGGTCACA 59.625 57.895 0.00 0.00 0.00 3.58
323 330 0.250727 GCAGGTAAGGCTGGTCACAA 60.251 55.000 0.00 0.00 0.00 3.33
324 331 1.614317 GCAGGTAAGGCTGGTCACAAT 60.614 52.381 0.00 0.00 0.00 2.71
325 332 2.086869 CAGGTAAGGCTGGTCACAATG 58.913 52.381 0.00 0.00 0.00 2.82
326 333 1.004745 AGGTAAGGCTGGTCACAATGG 59.995 52.381 0.00 0.00 0.00 3.16
327 334 1.463674 GTAAGGCTGGTCACAATGGG 58.536 55.000 0.00 0.00 0.00 4.00
328 335 0.331278 TAAGGCTGGTCACAATGGGG 59.669 55.000 0.00 0.00 0.00 4.96
329 336 1.434513 AAGGCTGGTCACAATGGGGA 61.435 55.000 0.00 0.00 0.00 4.81
330 337 1.379044 GGCTGGTCACAATGGGGAG 60.379 63.158 0.00 0.00 0.00 4.30
331 338 1.379044 GCTGGTCACAATGGGGAGG 60.379 63.158 0.00 0.00 0.00 4.30
332 339 1.852157 GCTGGTCACAATGGGGAGGA 61.852 60.000 0.00 0.00 0.00 3.71
333 340 0.698238 CTGGTCACAATGGGGAGGAA 59.302 55.000 0.00 0.00 0.00 3.36
334 341 0.404040 TGGTCACAATGGGGAGGAAC 59.596 55.000 0.00 0.00 0.00 3.62
336 343 1.075536 GGTCACAATGGGGAGGAACTT 59.924 52.381 0.00 0.00 41.55 2.66
337 344 2.307686 GGTCACAATGGGGAGGAACTTA 59.692 50.000 0.00 0.00 41.55 2.24
338 345 3.610911 GTCACAATGGGGAGGAACTTAG 58.389 50.000 0.00 0.00 41.55 2.18
339 346 2.576191 TCACAATGGGGAGGAACTTAGG 59.424 50.000 0.00 0.00 41.55 2.69
340 347 2.576191 CACAATGGGGAGGAACTTAGGA 59.424 50.000 0.00 0.00 41.55 2.94
341 348 2.846827 ACAATGGGGAGGAACTTAGGAG 59.153 50.000 0.00 0.00 41.55 3.69
342 349 2.846827 CAATGGGGAGGAACTTAGGAGT 59.153 50.000 0.00 0.00 41.55 3.85
343 350 4.037927 CAATGGGGAGGAACTTAGGAGTA 58.962 47.826 0.00 0.00 41.55 2.59
344 351 3.858696 TGGGGAGGAACTTAGGAGTAA 57.141 47.619 0.00 0.00 41.55 2.24
345 352 3.447950 TGGGGAGGAACTTAGGAGTAAC 58.552 50.000 0.00 0.00 41.55 2.50
346 353 3.181404 TGGGGAGGAACTTAGGAGTAACA 60.181 47.826 0.00 0.00 41.55 2.41
347 354 4.038633 GGGGAGGAACTTAGGAGTAACAT 58.961 47.826 0.00 0.00 41.55 2.71
348 355 4.101274 GGGGAGGAACTTAGGAGTAACATC 59.899 50.000 0.00 0.00 41.55 3.06
349 356 4.715297 GGGAGGAACTTAGGAGTAACATCA 59.285 45.833 0.00 0.00 41.55 3.07
350 357 5.395435 GGGAGGAACTTAGGAGTAACATCAC 60.395 48.000 0.00 0.00 41.55 3.06
351 358 5.187186 GGAGGAACTTAGGAGTAACATCACA 59.813 44.000 0.00 0.00 41.55 3.58
352 359 6.038997 AGGAACTTAGGAGTAACATCACAC 57.961 41.667 0.00 0.00 34.21 3.82
353 360 5.542635 AGGAACTTAGGAGTAACATCACACA 59.457 40.000 0.00 0.00 34.21 3.72
354 361 5.638234 GGAACTTAGGAGTAACATCACACAC 59.362 44.000 0.00 0.00 34.21 3.82
355 362 6.420913 AACTTAGGAGTAACATCACACACT 57.579 37.500 0.00 0.00 34.21 3.55
356 363 6.026947 ACTTAGGAGTAACATCACACACTC 57.973 41.667 0.00 0.00 37.32 3.51
362 369 6.648725 GAGTAACATCACACACTCCAATAC 57.351 41.667 0.00 0.00 32.93 1.89
363 370 6.109156 AGTAACATCACACACTCCAATACA 57.891 37.500 0.00 0.00 0.00 2.29
364 371 6.530120 AGTAACATCACACACTCCAATACAA 58.470 36.000 0.00 0.00 0.00 2.41
365 372 5.689383 AACATCACACACTCCAATACAAC 57.311 39.130 0.00 0.00 0.00 3.32
366 373 4.973168 ACATCACACACTCCAATACAACT 58.027 39.130 0.00 0.00 0.00 3.16
367 374 5.376625 ACATCACACACTCCAATACAACTT 58.623 37.500 0.00 0.00 0.00 2.66
368 375 5.827797 ACATCACACACTCCAATACAACTTT 59.172 36.000 0.00 0.00 0.00 2.66
369 376 5.749596 TCACACACTCCAATACAACTTTG 57.250 39.130 0.00 0.00 0.00 2.77
370 377 4.036262 TCACACACTCCAATACAACTTTGC 59.964 41.667 0.00 0.00 0.00 3.68
371 378 4.036734 CACACACTCCAATACAACTTTGCT 59.963 41.667 0.00 0.00 0.00 3.91
372 379 4.644685 ACACACTCCAATACAACTTTGCTT 59.355 37.500 0.00 0.00 0.00 3.91
373 380 5.825679 ACACACTCCAATACAACTTTGCTTA 59.174 36.000 0.00 0.00 0.00 3.09
374 381 6.490040 ACACACTCCAATACAACTTTGCTTAT 59.510 34.615 0.00 0.00 0.00 1.73
375 382 6.803320 CACACTCCAATACAACTTTGCTTATG 59.197 38.462 0.00 0.00 0.00 1.90
376 383 6.490040 ACACTCCAATACAACTTTGCTTATGT 59.510 34.615 0.00 0.00 0.00 2.29
377 384 6.803320 CACTCCAATACAACTTTGCTTATGTG 59.197 38.462 0.00 0.00 0.00 3.21
378 385 6.490040 ACTCCAATACAACTTTGCTTATGTGT 59.510 34.615 0.00 0.00 0.00 3.72
379 386 6.908825 TCCAATACAACTTTGCTTATGTGTC 58.091 36.000 0.00 0.00 0.00 3.67
380 387 6.488344 TCCAATACAACTTTGCTTATGTGTCA 59.512 34.615 0.00 0.00 0.00 3.58
381 388 6.582295 CCAATACAACTTTGCTTATGTGTCAC 59.418 38.462 0.00 0.00 0.00 3.67
382 389 6.875948 ATACAACTTTGCTTATGTGTCACA 57.124 33.333 8.40 8.40 0.00 3.58
383 390 5.772825 ACAACTTTGCTTATGTGTCACAT 57.227 34.783 21.70 21.70 42.35 3.21
384 391 6.875948 ACAACTTTGCTTATGTGTCACATA 57.124 33.333 19.64 19.64 39.88 2.29
385 392 7.452880 ACAACTTTGCTTATGTGTCACATAT 57.547 32.000 23.14 5.48 40.41 1.78
386 393 7.885297 ACAACTTTGCTTATGTGTCACATATT 58.115 30.769 23.14 11.81 40.41 1.28
387 394 8.359642 ACAACTTTGCTTATGTGTCACATATTT 58.640 29.630 23.14 4.42 40.41 1.40
388 395 9.838975 CAACTTTGCTTATGTGTCACATATTTA 57.161 29.630 23.14 10.29 40.41 1.40
400 407 9.591792 TGTGTCACATATTTAATGAAGAGAGAG 57.408 33.333 0.18 0.00 0.00 3.20
401 408 9.039870 GTGTCACATATTTAATGAAGAGAGAGG 57.960 37.037 0.00 0.00 0.00 3.69
402 409 8.762645 TGTCACATATTTAATGAAGAGAGAGGT 58.237 33.333 0.00 0.00 0.00 3.85
403 410 9.039870 GTCACATATTTAATGAAGAGAGAGGTG 57.960 37.037 0.00 0.00 0.00 4.00
404 411 7.712639 TCACATATTTAATGAAGAGAGAGGTGC 59.287 37.037 0.00 0.00 0.00 5.01
405 412 7.714377 CACATATTTAATGAAGAGAGAGGTGCT 59.286 37.037 0.00 0.00 0.00 4.40
406 413 8.270744 ACATATTTAATGAAGAGAGAGGTGCTT 58.729 33.333 0.00 0.00 0.00 3.91
407 414 6.998968 ATTTAATGAAGAGAGAGGTGCTTG 57.001 37.500 0.00 0.00 0.00 4.01
408 415 5.489792 TTAATGAAGAGAGAGGTGCTTGT 57.510 39.130 0.00 0.00 0.00 3.16
409 416 2.827800 TGAAGAGAGAGGTGCTTGTG 57.172 50.000 0.00 0.00 0.00 3.33
410 417 1.345741 TGAAGAGAGAGGTGCTTGTGG 59.654 52.381 0.00 0.00 0.00 4.17
411 418 1.346068 GAAGAGAGAGGTGCTTGTGGT 59.654 52.381 0.00 0.00 0.00 4.16
412 419 2.310779 AGAGAGAGGTGCTTGTGGTA 57.689 50.000 0.00 0.00 0.00 3.25
413 420 2.609747 AGAGAGAGGTGCTTGTGGTAA 58.390 47.619 0.00 0.00 0.00 2.85
414 421 2.300437 AGAGAGAGGTGCTTGTGGTAAC 59.700 50.000 0.00 0.00 0.00 2.50
415 422 2.300437 GAGAGAGGTGCTTGTGGTAACT 59.700 50.000 0.00 0.00 37.61 2.24
416 423 3.507411 AGAGAGGTGCTTGTGGTAACTA 58.493 45.455 0.00 0.00 37.61 2.24
417 424 3.511934 AGAGAGGTGCTTGTGGTAACTAG 59.488 47.826 0.00 0.00 37.61 2.57
434 441 5.672421 AACTAGCTAAGTTACCGGAACAT 57.328 39.130 9.46 4.03 46.85 2.71
435 442 5.259832 ACTAGCTAAGTTACCGGAACATC 57.740 43.478 9.46 0.00 40.86 3.06
436 443 4.708421 ACTAGCTAAGTTACCGGAACATCA 59.292 41.667 9.46 0.00 40.86 3.07
437 444 3.858247 AGCTAAGTTACCGGAACATCAC 58.142 45.455 9.46 0.66 40.86 3.06
438 445 3.259876 AGCTAAGTTACCGGAACATCACA 59.740 43.478 9.46 0.00 40.86 3.58
439 446 3.370061 GCTAAGTTACCGGAACATCACAC 59.630 47.826 9.46 0.00 40.86 3.82
440 447 3.478857 AAGTTACCGGAACATCACACA 57.521 42.857 9.46 0.00 40.86 3.72
441 448 2.762745 AGTTACCGGAACATCACACAC 58.237 47.619 9.46 0.00 40.86 3.82
442 449 2.367567 AGTTACCGGAACATCACACACT 59.632 45.455 9.46 0.00 40.86 3.55
443 450 2.735134 GTTACCGGAACATCACACACTC 59.265 50.000 9.46 0.00 38.02 3.51
444 451 0.034896 ACCGGAACATCACACACTCC 59.965 55.000 9.46 0.00 0.00 3.85
445 452 0.034756 CCGGAACATCACACACTCCA 59.965 55.000 0.00 0.00 0.00 3.86
446 453 1.542328 CCGGAACATCACACACTCCAA 60.542 52.381 0.00 0.00 0.00 3.53
447 454 1.800586 CGGAACATCACACACTCCAAG 59.199 52.381 0.00 0.00 0.00 3.61
448 455 2.547855 CGGAACATCACACACTCCAAGA 60.548 50.000 0.00 0.00 0.00 3.02
449 456 3.476552 GGAACATCACACACTCCAAGAA 58.523 45.455 0.00 0.00 0.00 2.52
450 457 3.882888 GGAACATCACACACTCCAAGAAA 59.117 43.478 0.00 0.00 0.00 2.52
451 458 4.261197 GGAACATCACACACTCCAAGAAAC 60.261 45.833 0.00 0.00 0.00 2.78
452 459 3.884895 ACATCACACACTCCAAGAAACA 58.115 40.909 0.00 0.00 0.00 2.83
453 460 4.269183 ACATCACACACTCCAAGAAACAA 58.731 39.130 0.00 0.00 0.00 2.83
454 461 4.889409 ACATCACACACTCCAAGAAACAAT 59.111 37.500 0.00 0.00 0.00 2.71
455 462 4.898829 TCACACACTCCAAGAAACAATG 57.101 40.909 0.00 0.00 0.00 2.82
456 463 4.522114 TCACACACTCCAAGAAACAATGA 58.478 39.130 0.00 0.00 0.00 2.57
457 464 4.946772 TCACACACTCCAAGAAACAATGAA 59.053 37.500 0.00 0.00 0.00 2.57
458 465 5.593909 TCACACACTCCAAGAAACAATGAAT 59.406 36.000 0.00 0.00 0.00 2.57
459 466 5.916883 CACACACTCCAAGAAACAATGAATC 59.083 40.000 0.00 0.00 0.00 2.52
460 467 5.829924 ACACACTCCAAGAAACAATGAATCT 59.170 36.000 0.00 0.00 0.00 2.40
461 468 6.998074 ACACACTCCAAGAAACAATGAATCTA 59.002 34.615 0.00 0.00 0.00 1.98
462 469 7.667219 ACACACTCCAAGAAACAATGAATCTAT 59.333 33.333 0.00 0.00 0.00 1.98
463 470 9.166173 CACACTCCAAGAAACAATGAATCTATA 57.834 33.333 0.00 0.00 0.00 1.31
464 471 9.739276 ACACTCCAAGAAACAATGAATCTATAA 57.261 29.630 0.00 0.00 0.00 0.98
465 472 9.994432 CACTCCAAGAAACAATGAATCTATAAC 57.006 33.333 0.00 0.00 0.00 1.89
466 473 9.178758 ACTCCAAGAAACAATGAATCTATAACC 57.821 33.333 0.00 0.00 0.00 2.85
467 474 9.401058 CTCCAAGAAACAATGAATCTATAACCT 57.599 33.333 0.00 0.00 0.00 3.50
489 496 9.801873 AACCTAATAAATACATTGTTGCATGAC 57.198 29.630 0.00 0.00 0.00 3.06
490 497 8.965819 ACCTAATAAATACATTGTTGCATGACA 58.034 29.630 0.00 0.00 0.00 3.58
491 498 9.236691 CCTAATAAATACATTGTTGCATGACAC 57.763 33.333 0.00 0.00 0.00 3.67
494 501 9.787532 AATAAATACATTGTTGCATGACACTAC 57.212 29.630 0.00 0.00 0.00 2.73
495 502 6.816134 AATACATTGTTGCATGACACTACA 57.184 33.333 0.00 0.00 0.00 2.74
496 503 7.395190 AATACATTGTTGCATGACACTACAT 57.605 32.000 0.00 0.00 0.00 2.29
497 504 8.504812 AATACATTGTTGCATGACACTACATA 57.495 30.769 0.00 0.00 0.00 2.29
498 505 6.426980 ACATTGTTGCATGACACTACATAG 57.573 37.500 0.00 0.00 0.00 2.23
499 506 6.172630 ACATTGTTGCATGACACTACATAGA 58.827 36.000 0.00 0.00 0.00 1.98
500 507 6.825213 ACATTGTTGCATGACACTACATAGAT 59.175 34.615 0.00 0.00 0.00 1.98
501 508 6.667007 TTGTTGCATGACACTACATAGATG 57.333 37.500 0.00 0.00 0.00 2.90
502 509 5.733676 TGTTGCATGACACTACATAGATGT 58.266 37.500 0.00 0.08 44.48 3.06
503 510 6.172630 TGTTGCATGACACTACATAGATGTT 58.827 36.000 0.00 0.00 41.97 2.71
504 511 6.313658 TGTTGCATGACACTACATAGATGTTC 59.686 38.462 0.00 0.00 41.97 3.18
505 512 5.359756 TGCATGACACTACATAGATGTTCC 58.640 41.667 0.00 0.00 41.97 3.62
506 513 5.129320 TGCATGACACTACATAGATGTTCCT 59.871 40.000 0.00 0.00 41.97 3.36
507 514 6.323739 TGCATGACACTACATAGATGTTCCTA 59.676 38.462 0.00 0.00 41.97 2.94
508 515 6.642950 GCATGACACTACATAGATGTTCCTAC 59.357 42.308 0.00 0.00 41.97 3.18
509 516 6.710597 TGACACTACATAGATGTTCCTACC 57.289 41.667 0.00 0.00 41.97 3.18
510 517 5.597182 TGACACTACATAGATGTTCCTACCC 59.403 44.000 0.00 0.00 41.97 3.69
511 518 5.525484 ACACTACATAGATGTTCCTACCCA 58.475 41.667 0.00 0.00 41.97 4.51
512 519 6.143915 ACACTACATAGATGTTCCTACCCAT 58.856 40.000 0.00 0.00 41.97 4.00
513 520 6.615726 ACACTACATAGATGTTCCTACCCATT 59.384 38.462 0.00 0.00 41.97 3.16
514 521 6.931281 CACTACATAGATGTTCCTACCCATTG 59.069 42.308 0.00 0.00 41.97 2.82
515 522 5.975988 ACATAGATGTTCCTACCCATTGT 57.024 39.130 0.00 0.00 37.90 2.71
516 523 5.684704 ACATAGATGTTCCTACCCATTGTG 58.315 41.667 0.00 0.00 37.90 3.33
517 524 3.652057 AGATGTTCCTACCCATTGTGG 57.348 47.619 0.00 0.00 37.25 4.17
518 525 3.189606 AGATGTTCCTACCCATTGTGGA 58.810 45.455 0.00 0.00 40.96 4.02
519 526 3.200825 AGATGTTCCTACCCATTGTGGAG 59.799 47.826 0.00 0.00 40.96 3.86
520 527 1.633432 TGTTCCTACCCATTGTGGAGG 59.367 52.381 0.00 0.00 40.96 4.30
521 528 1.633945 GTTCCTACCCATTGTGGAGGT 59.366 52.381 0.00 0.00 40.96 3.85
522 529 2.841881 GTTCCTACCCATTGTGGAGGTA 59.158 50.000 0.00 0.00 40.96 3.08
527 534 3.994931 ACCCATTGTGGAGGTAGTAAC 57.005 47.619 0.00 0.00 40.96 2.50
528 535 3.253220 ACCCATTGTGGAGGTAGTAACA 58.747 45.455 0.00 0.00 40.96 2.41
529 536 3.850173 ACCCATTGTGGAGGTAGTAACAT 59.150 43.478 0.00 0.00 40.96 2.71
530 537 5.034200 ACCCATTGTGGAGGTAGTAACATA 58.966 41.667 0.00 0.00 40.96 2.29
531 538 5.130477 ACCCATTGTGGAGGTAGTAACATAG 59.870 44.000 0.00 0.00 40.96 2.23
532 539 5.130477 CCCATTGTGGAGGTAGTAACATAGT 59.870 44.000 0.00 0.00 40.96 2.12
533 540 6.281405 CCATTGTGGAGGTAGTAACATAGTC 58.719 44.000 0.00 0.00 40.96 2.59
534 541 6.098409 CCATTGTGGAGGTAGTAACATAGTCT 59.902 42.308 0.00 0.00 40.96 3.24
535 542 7.287005 CCATTGTGGAGGTAGTAACATAGTCTA 59.713 40.741 0.00 0.00 40.96 2.59
536 543 7.876936 TTGTGGAGGTAGTAACATAGTCTAG 57.123 40.000 0.00 0.00 0.00 2.43
537 544 6.363065 TGTGGAGGTAGTAACATAGTCTAGG 58.637 44.000 0.00 0.00 0.00 3.02
538 545 5.769162 GTGGAGGTAGTAACATAGTCTAGGG 59.231 48.000 0.00 0.00 0.00 3.53
539 546 5.673574 TGGAGGTAGTAACATAGTCTAGGGA 59.326 44.000 0.00 0.00 0.00 4.20
540 547 6.160992 TGGAGGTAGTAACATAGTCTAGGGAA 59.839 42.308 0.00 0.00 0.00 3.97
541 548 6.716173 GGAGGTAGTAACATAGTCTAGGGAAG 59.284 46.154 0.00 0.00 0.00 3.46
542 549 7.223472 AGGTAGTAACATAGTCTAGGGAAGT 57.777 40.000 0.00 0.00 0.00 3.01
543 550 7.061688 AGGTAGTAACATAGTCTAGGGAAGTG 58.938 42.308 0.00 0.00 0.00 3.16
544 551 6.832900 GGTAGTAACATAGTCTAGGGAAGTGT 59.167 42.308 0.00 0.00 0.00 3.55
545 552 6.777213 AGTAACATAGTCTAGGGAAGTGTG 57.223 41.667 0.00 0.00 0.00 3.82
546 553 6.254522 AGTAACATAGTCTAGGGAAGTGTGT 58.745 40.000 0.00 0.00 0.00 3.72
547 554 7.408543 AGTAACATAGTCTAGGGAAGTGTGTA 58.591 38.462 0.00 0.00 0.00 2.90
548 555 7.892241 AGTAACATAGTCTAGGGAAGTGTGTAA 59.108 37.037 0.00 0.00 0.00 2.41
549 556 6.777213 ACATAGTCTAGGGAAGTGTGTAAG 57.223 41.667 0.00 0.00 0.00 2.34
550 557 6.254522 ACATAGTCTAGGGAAGTGTGTAAGT 58.745 40.000 0.00 0.00 0.00 2.24
551 558 6.724905 ACATAGTCTAGGGAAGTGTGTAAGTT 59.275 38.462 0.00 0.00 0.00 2.66
552 559 7.892241 ACATAGTCTAGGGAAGTGTGTAAGTTA 59.108 37.037 0.00 0.00 0.00 2.24
553 560 6.587206 AGTCTAGGGAAGTGTGTAAGTTAC 57.413 41.667 6.06 6.06 0.00 2.50
554 561 6.313324 AGTCTAGGGAAGTGTGTAAGTTACT 58.687 40.000 14.00 0.00 0.00 2.24
555 562 7.465116 AGTCTAGGGAAGTGTGTAAGTTACTA 58.535 38.462 14.00 1.06 0.00 1.82
556 563 7.611079 AGTCTAGGGAAGTGTGTAAGTTACTAG 59.389 40.741 14.00 4.64 33.84 2.57
557 564 7.609532 GTCTAGGGAAGTGTGTAAGTTACTAGA 59.390 40.741 14.00 6.66 36.50 2.43
558 565 6.587206 AGGGAAGTGTGTAAGTTACTAGAC 57.413 41.667 14.00 8.96 0.00 2.59
559 566 6.313324 AGGGAAGTGTGTAAGTTACTAGACT 58.687 40.000 14.00 10.77 0.00 3.24
560 567 7.465116 AGGGAAGTGTGTAAGTTACTAGACTA 58.535 38.462 14.00 0.00 0.00 2.59
561 568 8.114743 AGGGAAGTGTGTAAGTTACTAGACTAT 58.885 37.037 14.00 6.10 0.00 2.12
562 569 8.189460 GGGAAGTGTGTAAGTTACTAGACTATG 58.811 40.741 14.00 0.00 0.00 2.23
563 570 8.738106 GGAAGTGTGTAAGTTACTAGACTATGT 58.262 37.037 14.00 1.40 0.00 2.29
566 573 9.517868 AGTGTGTAAGTTACTAGACTATGTTCT 57.482 33.333 14.00 0.00 0.00 3.01
569 576 9.074443 GTGTAAGTTACTAGACTATGTTCTTGC 57.926 37.037 14.00 0.00 0.00 4.01
570 577 8.248945 TGTAAGTTACTAGACTATGTTCTTGCC 58.751 37.037 14.00 0.00 0.00 4.52
571 578 6.223351 AGTTACTAGACTATGTTCTTGCCC 57.777 41.667 0.00 0.00 0.00 5.36
572 579 5.720041 AGTTACTAGACTATGTTCTTGCCCA 59.280 40.000 0.00 0.00 0.00 5.36
573 580 6.384305 AGTTACTAGACTATGTTCTTGCCCAT 59.616 38.462 0.00 0.00 0.00 4.00
574 581 5.700402 ACTAGACTATGTTCTTGCCCATT 57.300 39.130 0.00 0.00 0.00 3.16
575 582 5.431765 ACTAGACTATGTTCTTGCCCATTG 58.568 41.667 0.00 0.00 0.00 2.82
576 583 4.307032 AGACTATGTTCTTGCCCATTGT 57.693 40.909 0.00 0.00 31.33 2.71
577 584 4.012374 AGACTATGTTCTTGCCCATTGTG 58.988 43.478 0.00 0.00 29.34 3.33
578 585 4.009675 GACTATGTTCTTGCCCATTGTGA 58.990 43.478 0.00 0.00 29.34 3.58
579 586 3.758554 ACTATGTTCTTGCCCATTGTGAC 59.241 43.478 0.00 0.00 0.00 3.67
580 587 1.327303 TGTTCTTGCCCATTGTGACC 58.673 50.000 0.00 0.00 0.00 4.02
581 588 1.327303 GTTCTTGCCCATTGTGACCA 58.673 50.000 0.00 0.00 0.00 4.02
582 589 1.270550 GTTCTTGCCCATTGTGACCAG 59.729 52.381 0.00 0.00 0.00 4.00
583 590 0.895100 TCTTGCCCATTGTGACCAGC 60.895 55.000 0.00 0.00 0.00 4.85
584 591 1.880819 CTTGCCCATTGTGACCAGCC 61.881 60.000 0.00 0.00 0.00 4.85
617 624 1.473258 ATAAATGCTGGCTCGCCAAA 58.527 45.000 12.29 3.84 46.63 3.28
622 629 2.048603 GCTGGCTCGCCAAATCCTT 61.049 57.895 12.29 0.00 46.63 3.36
741 749 4.526770 CGGGGATTTCCGTGGTAC 57.473 61.111 0.00 0.00 44.60 3.34
795 803 0.976641 TCCCAACTCTGACTCGCAAT 59.023 50.000 0.00 0.00 0.00 3.56
806 814 1.209898 CTCGCAATCGCAAGCCAAA 59.790 52.632 0.00 0.00 38.40 3.28
825 833 1.303643 GCCACCACCTTCTTCCCTG 60.304 63.158 0.00 0.00 0.00 4.45
935 943 1.659211 CGAATAAGCATAAACGCGCCC 60.659 52.381 5.73 0.00 36.85 6.13
938 946 1.149361 TAAGCATAAACGCGCCCGAG 61.149 55.000 5.73 0.00 38.29 4.63
1026 1034 1.366111 CGACGGCGGAAATCCACAAT 61.366 55.000 13.24 0.00 35.14 2.71
1350 1358 2.492090 CTCAAGGACCGCCTCGAG 59.508 66.667 5.13 5.13 46.28 4.04
1383 1391 3.737774 GTGCTACTACTCGTTTCCGTTTT 59.262 43.478 0.00 0.00 35.01 2.43
1388 1396 0.942252 ACTCGTTTCCGTTTTCTGGC 59.058 50.000 0.00 0.00 35.01 4.85
1606 1624 0.043053 CGTTTGTGTCTCAGCGTGTG 60.043 55.000 0.00 0.00 0.00 3.82
1788 1806 1.200716 CCACAGAAAACATGCGATGCT 59.799 47.619 0.00 0.00 0.00 3.79
1789 1807 2.512885 CACAGAAAACATGCGATGCTC 58.487 47.619 0.00 0.00 0.00 4.26
1790 1808 2.095617 CACAGAAAACATGCGATGCTCA 60.096 45.455 0.00 0.00 0.00 4.26
1791 1809 2.751259 ACAGAAAACATGCGATGCTCAT 59.249 40.909 0.00 0.00 0.00 2.90
1792 1810 3.105937 CAGAAAACATGCGATGCTCATG 58.894 45.455 0.00 1.85 44.99 3.07
1793 1811 1.850441 GAAAACATGCGATGCTCATGC 59.150 47.619 0.00 0.00 43.71 4.06
1794 1812 1.100510 AAACATGCGATGCTCATGCT 58.899 45.000 0.00 0.00 43.71 3.79
1795 1813 0.661552 AACATGCGATGCTCATGCTC 59.338 50.000 0.00 0.00 43.71 4.26
1796 1814 0.463116 ACATGCGATGCTCATGCTCA 60.463 50.000 0.00 0.00 43.71 4.26
1797 1815 0.875059 CATGCGATGCTCATGCTCAT 59.125 50.000 0.00 0.00 40.48 2.90
1798 1816 0.875059 ATGCGATGCTCATGCTCATG 59.125 50.000 3.55 3.55 40.48 3.07
1799 1817 1.082038 GCGATGCTCATGCTCATGC 60.082 57.895 5.04 5.46 38.65 4.06
1880 1904 0.551879 TTGACCCGGGTCTTTTGGAA 59.448 50.000 44.64 30.60 44.80 3.53
2298 2322 9.346725 CTTATCAAGCTTCCTTTTTGTTACATC 57.653 33.333 0.00 0.00 0.00 3.06
2410 2434 6.463360 ACTTGCAAATCCGAAATAAACCAAT 58.537 32.000 0.00 0.00 0.00 3.16
2639 2664 3.009723 CTCACCGTTTGGACATTGCTAT 58.990 45.455 0.00 0.00 39.21 2.97
2851 2876 3.382083 TGTCCTGTAGGTGAGATGCTA 57.618 47.619 0.00 0.00 36.34 3.49
2989 3014 4.172512 ATCTCCCTGCTGCAGCCG 62.173 66.667 34.64 28.21 41.18 5.52
3013 3038 4.216902 GCCCCTGAAACGTACAACTTATTT 59.783 41.667 0.00 0.00 0.00 1.40
3022 3047 9.607285 GAAACGTACAACTTATTTGATGACATT 57.393 29.630 0.00 0.00 38.73 2.71
3067 3092 2.363795 TACCAGGGCCCTCGTGAG 60.364 66.667 30.40 15.52 33.39 3.51
3085 3110 3.251004 GTGAGGACGTGCTTGAATTCTTT 59.749 43.478 12.08 0.00 0.00 2.52
3112 3137 0.764890 TGGGGTTCAAGTGTCCTGAG 59.235 55.000 0.00 0.00 0.00 3.35
3127 3152 1.684386 CTGAGAGGAAGGGCATCGCT 61.684 60.000 0.00 0.00 31.26 4.93
3150 3175 5.539048 TGACTTCTTGCAAGAGGTACTTAC 58.461 41.667 35.63 25.21 44.22 2.34
3162 3187 3.947834 GAGGTACTTACATTGCCATTGCT 59.052 43.478 0.00 0.00 41.55 3.91
3200 3228 7.602753 ACTGAATGGGTGCTTTTATTAAAGAC 58.397 34.615 8.35 3.95 42.78 3.01
3201 3229 7.232534 ACTGAATGGGTGCTTTTATTAAAGACA 59.767 33.333 8.35 3.37 42.78 3.41
3205 3233 6.919721 TGGGTGCTTTTATTAAAGACATGTC 58.080 36.000 18.47 18.47 42.78 3.06
3209 3237 7.965107 GGTGCTTTTATTAAAGACATGTCTCTG 59.035 37.037 28.01 11.31 42.78 3.35
3212 3242 8.507249 GCTTTTATTAAAGACATGTCTCTGTGT 58.493 33.333 28.01 15.33 42.78 3.72
3221 3251 6.939622 AGACATGTCTCTGTGTGATTAATGA 58.060 36.000 22.89 0.00 34.17 2.57
3263 3293 0.243365 CAAAAGCAATACTGGGCGCA 59.757 50.000 10.83 2.47 34.54 6.09
3357 3387 2.695666 AGCTATAAGAAAGGAGCTCGCA 59.304 45.455 7.83 0.00 41.40 5.10
3579 3609 2.093500 AGAAGCAACATAGGCATGACGA 60.093 45.455 0.00 0.00 35.96 4.20
3590 3620 1.605710 GGCATGACGAATTCCCTCATG 59.394 52.381 24.24 24.24 42.82 3.07
3596 3626 3.260632 TGACGAATTCCCTCATGTTCTGA 59.739 43.478 0.00 0.00 0.00 3.27
3661 3691 2.736144 TCCGTACAAAGATGAAGCGT 57.264 45.000 0.00 0.00 0.00 5.07
3787 3817 2.435805 ACCTGTGTTCTTCAAGCAGAGA 59.564 45.455 0.00 0.00 0.00 3.10
3790 3820 4.563168 CCTGTGTTCTTCAAGCAGAGAGAT 60.563 45.833 0.00 0.00 0.00 2.75
3939 3969 3.416156 GCAGGTGAGATTTATGGGGATC 58.584 50.000 0.00 0.00 0.00 3.36
3959 3989 6.717997 GGGATCCTCTTTTTGGTTAACAACTA 59.282 38.462 12.58 0.00 39.19 2.24
4003 4033 3.000727 CGGAAATGTTCTGACAGTACCC 58.999 50.000 9.45 3.17 39.58 3.69
4524 4554 5.663106 TCTCTTCACTCTTGCCCTTACATAT 59.337 40.000 0.00 0.00 0.00 1.78
4538 4568 5.605534 CCTTACATATCTGAAGGGTGAGTG 58.394 45.833 0.00 0.00 36.81 3.51
4701 4731 1.002087 GAACGGTGAGGTTCTGGACAT 59.998 52.381 0.00 0.00 42.33 3.06
5665 5712 4.272991 GCATTTGATGAGGTGAGTGAGATC 59.727 45.833 0.00 0.00 0.00 2.75
5700 5747 2.334977 TCTACCAGCTTTCCTGTGGAA 58.665 47.619 0.00 0.00 40.27 3.53
6000 6047 4.993307 GCTCAGGGCATTCATGGA 57.007 55.556 0.00 0.00 41.35 3.41
6030 6077 7.041107 GCAAAATTAAAGATGGCTACAATCCA 58.959 34.615 0.00 0.00 38.09 3.41
6080 6127 1.929836 CGGTCAAGAACAGATGCTAGC 59.070 52.381 8.10 8.10 0.00 3.42
6148 6195 5.955959 TGAGTAACTTACTTGCCATCCTAGA 59.044 40.000 2.91 0.00 39.59 2.43
6149 6196 6.611642 TGAGTAACTTACTTGCCATCCTAGAT 59.388 38.462 2.91 0.00 39.59 1.98
6150 6197 7.783119 TGAGTAACTTACTTGCCATCCTAGATA 59.217 37.037 2.91 0.00 39.59 1.98
6151 6198 8.728596 AGTAACTTACTTGCCATCCTAGATAT 57.271 34.615 0.00 0.00 34.86 1.63
6152 6199 9.824216 AGTAACTTACTTGCCATCCTAGATATA 57.176 33.333 0.00 0.00 34.86 0.86
6154 6201 8.728596 AACTTACTTGCCATCCTAGATATAGT 57.271 34.615 0.00 0.00 0.00 2.12
6155 6202 8.356000 ACTTACTTGCCATCCTAGATATAGTC 57.644 38.462 0.00 0.00 0.00 2.59
6156 6203 7.950684 ACTTACTTGCCATCCTAGATATAGTCA 59.049 37.037 0.00 0.00 0.00 3.41
6157 6204 8.901472 TTACTTGCCATCCTAGATATAGTCAT 57.099 34.615 0.00 0.00 0.00 3.06
6158 6205 7.805083 ACTTGCCATCCTAGATATAGTCATT 57.195 36.000 0.00 0.00 0.00 2.57
6159 6206 8.212259 ACTTGCCATCCTAGATATAGTCATTT 57.788 34.615 0.00 0.00 0.00 2.32
6160 6207 8.099537 ACTTGCCATCCTAGATATAGTCATTTG 58.900 37.037 0.00 0.00 0.00 2.32
6161 6208 6.950842 TGCCATCCTAGATATAGTCATTTGG 58.049 40.000 0.00 0.00 0.00 3.28
6162 6209 6.730507 TGCCATCCTAGATATAGTCATTTGGA 59.269 38.462 0.00 0.00 0.00 3.53
6163 6210 7.237471 TGCCATCCTAGATATAGTCATTTGGAA 59.763 37.037 0.00 0.00 0.00 3.53
6164 6211 8.270744 GCCATCCTAGATATAGTCATTTGGAAT 58.729 37.037 0.00 0.00 0.00 3.01
6165 6212 9.829507 CCATCCTAGATATAGTCATTTGGAATC 57.170 37.037 0.00 0.00 0.00 2.52
6512 6750 5.939883 TGGCAGATGTAGATGTAATATTGGC 59.060 40.000 0.00 0.00 0.00 4.52
6631 6869 4.567959 CAGTCTTCGATCACACAATGCATA 59.432 41.667 0.00 0.00 0.00 3.14
6810 7048 2.807837 GCAAGCAGCCAACCTTTGAAAT 60.808 45.455 0.00 0.00 37.23 2.17
7026 7264 2.576615 GCCAGGTGAAAGTTGTTCTCT 58.423 47.619 0.00 0.00 0.00 3.10
7102 7340 4.081752 AGAGCCAGAGTCTGATTAGTGTTG 60.082 45.833 22.09 2.40 32.44 3.33
7162 7400 1.355916 CTCGCTCAGGCTACCGTAC 59.644 63.158 0.00 0.00 36.09 3.67
7403 7641 0.478072 ATCACCTTTGGCAGTCCACA 59.522 50.000 0.00 0.00 43.33 4.17
7552 7790 0.828022 TGGTTGTCTCACAGTTCGGT 59.172 50.000 0.00 0.00 0.00 4.69
7688 7926 2.098614 TGCTGTTTGCCTTCTTGTTCA 58.901 42.857 0.00 0.00 42.00 3.18
7779 8017 4.792106 GCATTAGTTGCCCGCAAG 57.208 55.556 1.53 0.00 46.15 4.01
7787 8025 2.446435 AGTTGCCCGCAAGTATGAATT 58.554 42.857 7.98 0.00 37.77 2.17
7872 8235 9.427821 AGTACATCATAGAGGTCTATCTTTTGT 57.572 33.333 0.00 2.52 37.07 2.83
7959 8323 0.322975 AGTACACCTGGCTTCTGCAG 59.677 55.000 7.63 7.63 41.91 4.41
7975 8339 0.447801 GCAGCAACTCAATACCACGG 59.552 55.000 0.00 0.00 0.00 4.94
8024 8388 8.345565 CACACATCCAAATTATTACTAGAAGGC 58.654 37.037 0.00 0.00 0.00 4.35
8064 8433 6.384305 ACCAAGATCTTAGGCATGTAGTAACT 59.616 38.462 18.38 0.00 0.00 2.24
8076 8445 7.883311 AGGCATGTAGTAACTAACAAAGACATT 59.117 33.333 0.00 0.00 0.00 2.71
8077 8446 7.962918 GGCATGTAGTAACTAACAAAGACATTG 59.037 37.037 0.00 0.00 44.95 2.82
8139 8522 1.293763 TGGATCCATCACTCCTACCCA 59.706 52.381 11.44 0.00 32.47 4.51
8158 8541 3.181467 CCCACAATCCTTTGCAACTTCAA 60.181 43.478 0.00 0.00 36.22 2.69
8193 8576 9.803130 CTTAAGCACTAATGATTTACATGATCG 57.197 33.333 0.00 0.00 39.39 3.69
8199 8582 6.936900 ACTAATGATTTACATGATCGGGAAGG 59.063 38.462 0.00 0.00 39.39 3.46
8232 8615 7.693969 ACAAAGAGGAGATTGATTTGGTTAG 57.306 36.000 0.00 0.00 35.64 2.34
8239 8622 7.177878 AGGAGATTGATTTGGTTAGTGAACAT 58.822 34.615 0.00 0.00 37.29 2.71
8313 8696 3.004734 AGCTTGTTGGCACATTGTAACTC 59.995 43.478 0.00 0.00 39.30 3.01
8335 8718 2.886523 TGGACTTCTGCAAACTCATTGG 59.113 45.455 0.00 0.00 39.54 3.16
8346 8729 5.721000 TGCAAACTCATTGGGGATTTCTATT 59.279 36.000 0.00 0.00 39.54 1.73
8372 8755 6.905215 AGGGTCATATCAATATGGAGAGCATA 59.095 38.462 9.53 0.00 40.35 3.14
8413 8796 6.621514 ACCATGATCCCTAAGAAAGATAACCT 59.378 38.462 0.00 0.00 0.00 3.50
8418 8801 7.846823 TGATCCCTAAGAAAGATAACCTTCTCT 59.153 37.037 0.00 0.00 33.02 3.10
8442 8828 2.753247 GGGGACTTCACACCTATCTCT 58.247 52.381 0.00 0.00 0.00 3.10
8451 8837 6.667414 ACTTCACACCTATCTCTCTTCTCAAT 59.333 38.462 0.00 0.00 0.00 2.57
8458 8844 3.257469 TCTCTCTTCTCAATTGCGCAT 57.743 42.857 12.75 0.00 0.00 4.73
8484 8870 3.515602 ATTCTCACCAAACTTCTGGCT 57.484 42.857 0.00 0.00 40.45 4.75
8489 8875 3.882888 CTCACCAAACTTCTGGCTAACAA 59.117 43.478 0.00 0.00 40.45 2.83
8656 9042 7.447594 ACTTGATTTTGAGAAGGCATTTGATT 58.552 30.769 0.00 0.00 0.00 2.57
8657 9043 7.935210 ACTTGATTTTGAGAAGGCATTTGATTT 59.065 29.630 0.00 0.00 0.00 2.17
8658 9044 7.661127 TGATTTTGAGAAGGCATTTGATTTG 57.339 32.000 0.00 0.00 0.00 2.32
8659 9045 7.443477 TGATTTTGAGAAGGCATTTGATTTGA 58.557 30.769 0.00 0.00 0.00 2.69
8660 9046 8.098286 TGATTTTGAGAAGGCATTTGATTTGAT 58.902 29.630 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 9.558396 ACCTATGAATCAAATGAGATCTCTTTC 57.442 33.333 22.95 14.92 0.00 2.62
60 61 7.792032 ACTCGATGGAAAATTCTTACCTATGA 58.208 34.615 0.00 0.00 0.00 2.15
151 153 5.334105 CGCCCTTTGATTTGTATAGGAATCG 60.334 44.000 0.00 0.00 35.53 3.34
152 154 5.562890 GCGCCCTTTGATTTGTATAGGAATC 60.563 44.000 0.00 2.46 33.83 2.52
158 160 2.948979 CTGGCGCCCTTTGATTTGTATA 59.051 45.455 26.77 0.00 0.00 1.47
159 161 1.750778 CTGGCGCCCTTTGATTTGTAT 59.249 47.619 26.77 0.00 0.00 2.29
178 180 9.002061 AGGAATTCTATGAGGAAGATTTTCTCT 57.998 33.333 5.23 0.00 34.96 3.10
221 223 3.489738 CCAATCTATTTTTGGCCGCTGAG 60.490 47.826 0.00 0.00 37.42 3.35
222 224 2.426738 CCAATCTATTTTTGGCCGCTGA 59.573 45.455 0.00 0.00 37.42 4.26
223 225 2.426738 TCCAATCTATTTTTGGCCGCTG 59.573 45.455 0.00 0.00 42.79 5.18
225 227 2.165437 TGTCCAATCTATTTTTGGCCGC 59.835 45.455 0.00 0.00 42.79 6.53
226 228 3.694072 TCTGTCCAATCTATTTTTGGCCG 59.306 43.478 0.00 0.00 42.79 6.13
227 229 4.098501 CCTCTGTCCAATCTATTTTTGGCC 59.901 45.833 0.00 0.00 42.79 5.36
228 230 4.098501 CCCTCTGTCCAATCTATTTTTGGC 59.901 45.833 0.00 0.00 42.79 4.52
229 231 4.646492 CCCCTCTGTCCAATCTATTTTTGG 59.354 45.833 0.00 0.00 44.14 3.28
255 262 7.860872 CCGTAAGTATTTATTTCCCAGCATTTC 59.139 37.037 0.00 0.00 0.00 2.17
261 268 7.634671 AAACCCGTAAGTATTTATTTCCCAG 57.365 36.000 0.00 0.00 0.00 4.45
281 288 2.481276 GGAATGCGGGCTTGATTAAACC 60.481 50.000 0.00 0.00 0.00 3.27
309 316 0.331278 CCCCATTGTGACCAGCCTTA 59.669 55.000 0.00 0.00 0.00 2.69
310 317 1.077265 CCCCATTGTGACCAGCCTT 59.923 57.895 0.00 0.00 0.00 4.35
311 318 1.852157 TCCCCATTGTGACCAGCCT 60.852 57.895 0.00 0.00 0.00 4.58
312 319 1.379044 CTCCCCATTGTGACCAGCC 60.379 63.158 0.00 0.00 0.00 4.85
313 320 1.379044 CCTCCCCATTGTGACCAGC 60.379 63.158 0.00 0.00 0.00 4.85
314 321 0.698238 TTCCTCCCCATTGTGACCAG 59.302 55.000 0.00 0.00 0.00 4.00
315 322 0.404040 GTTCCTCCCCATTGTGACCA 59.596 55.000 0.00 0.00 0.00 4.02
316 323 0.698818 AGTTCCTCCCCATTGTGACC 59.301 55.000 0.00 0.00 0.00 4.02
317 324 2.586648 AAGTTCCTCCCCATTGTGAC 57.413 50.000 0.00 0.00 0.00 3.67
318 325 2.576191 CCTAAGTTCCTCCCCATTGTGA 59.424 50.000 0.00 0.00 0.00 3.58
319 326 2.576191 TCCTAAGTTCCTCCCCATTGTG 59.424 50.000 0.00 0.00 0.00 3.33
320 327 2.846827 CTCCTAAGTTCCTCCCCATTGT 59.153 50.000 0.00 0.00 0.00 2.71
321 328 2.846827 ACTCCTAAGTTCCTCCCCATTG 59.153 50.000 0.00 0.00 28.74 2.82
322 329 3.222394 ACTCCTAAGTTCCTCCCCATT 57.778 47.619 0.00 0.00 28.74 3.16
323 330 2.972153 ACTCCTAAGTTCCTCCCCAT 57.028 50.000 0.00 0.00 28.74 4.00
324 331 3.181404 TGTTACTCCTAAGTTCCTCCCCA 60.181 47.826 0.00 0.00 36.92 4.96
325 332 3.447950 TGTTACTCCTAAGTTCCTCCCC 58.552 50.000 0.00 0.00 36.92 4.81
326 333 4.715297 TGATGTTACTCCTAAGTTCCTCCC 59.285 45.833 0.00 0.00 36.92 4.30
327 334 5.187186 TGTGATGTTACTCCTAAGTTCCTCC 59.813 44.000 0.00 0.00 36.92 4.30
328 335 6.100668 GTGTGATGTTACTCCTAAGTTCCTC 58.899 44.000 0.00 0.00 36.92 3.71
329 336 5.542635 TGTGTGATGTTACTCCTAAGTTCCT 59.457 40.000 0.00 0.00 36.92 3.36
330 337 5.638234 GTGTGTGATGTTACTCCTAAGTTCC 59.362 44.000 0.00 0.00 36.92 3.62
331 338 6.456501 AGTGTGTGATGTTACTCCTAAGTTC 58.543 40.000 0.00 0.00 36.92 3.01
332 339 6.420913 AGTGTGTGATGTTACTCCTAAGTT 57.579 37.500 0.00 0.00 36.92 2.66
333 340 6.026947 GAGTGTGTGATGTTACTCCTAAGT 57.973 41.667 0.00 0.00 39.66 2.24
339 346 6.163476 TGTATTGGAGTGTGTGATGTTACTC 58.837 40.000 0.00 0.00 38.98 2.59
340 347 6.109156 TGTATTGGAGTGTGTGATGTTACT 57.891 37.500 0.00 0.00 0.00 2.24
341 348 6.426937 AGTTGTATTGGAGTGTGTGATGTTAC 59.573 38.462 0.00 0.00 0.00 2.50
342 349 6.530120 AGTTGTATTGGAGTGTGTGATGTTA 58.470 36.000 0.00 0.00 0.00 2.41
343 350 5.376625 AGTTGTATTGGAGTGTGTGATGTT 58.623 37.500 0.00 0.00 0.00 2.71
344 351 4.973168 AGTTGTATTGGAGTGTGTGATGT 58.027 39.130 0.00 0.00 0.00 3.06
345 352 5.947228 AAGTTGTATTGGAGTGTGTGATG 57.053 39.130 0.00 0.00 0.00 3.07
346 353 5.278463 GCAAAGTTGTATTGGAGTGTGTGAT 60.278 40.000 0.00 0.00 0.00 3.06
347 354 4.036262 GCAAAGTTGTATTGGAGTGTGTGA 59.964 41.667 0.00 0.00 0.00 3.58
348 355 4.036734 AGCAAAGTTGTATTGGAGTGTGTG 59.963 41.667 0.00 0.00 0.00 3.82
349 356 4.207165 AGCAAAGTTGTATTGGAGTGTGT 58.793 39.130 0.00 0.00 0.00 3.72
350 357 4.836125 AGCAAAGTTGTATTGGAGTGTG 57.164 40.909 0.00 0.00 0.00 3.82
351 358 6.490040 ACATAAGCAAAGTTGTATTGGAGTGT 59.510 34.615 0.00 0.00 0.00 3.55
352 359 6.803320 CACATAAGCAAAGTTGTATTGGAGTG 59.197 38.462 0.00 0.00 0.00 3.51
353 360 6.490040 ACACATAAGCAAAGTTGTATTGGAGT 59.510 34.615 0.00 0.00 0.00 3.85
354 361 6.913170 ACACATAAGCAAAGTTGTATTGGAG 58.087 36.000 0.00 0.00 0.00 3.86
355 362 6.488344 TGACACATAAGCAAAGTTGTATTGGA 59.512 34.615 0.00 0.00 0.00 3.53
356 363 6.582295 GTGACACATAAGCAAAGTTGTATTGG 59.418 38.462 0.00 0.00 0.00 3.16
357 364 7.138081 TGTGACACATAAGCAAAGTTGTATTG 58.862 34.615 3.56 0.00 0.00 1.90
358 365 7.270757 TGTGACACATAAGCAAAGTTGTATT 57.729 32.000 3.56 0.00 0.00 1.89
359 366 6.875948 TGTGACACATAAGCAAAGTTGTAT 57.124 33.333 3.56 0.00 0.00 2.29
360 367 6.875948 ATGTGACACATAAGCAAAGTTGTA 57.124 33.333 19.53 0.00 36.99 2.41
361 368 5.772825 ATGTGACACATAAGCAAAGTTGT 57.227 34.783 19.53 0.00 36.99 3.32
362 369 8.746922 AAATATGTGACACATAAGCAAAGTTG 57.253 30.769 27.48 0.00 43.50 3.16
374 381 9.591792 CTCTCTCTTCATTAAATATGTGACACA 57.408 33.333 11.41 11.41 0.00 3.72
375 382 9.039870 CCTCTCTCTTCATTAAATATGTGACAC 57.960 37.037 0.00 0.00 0.00 3.67
376 383 8.762645 ACCTCTCTCTTCATTAAATATGTGACA 58.237 33.333 0.00 0.00 0.00 3.58
377 384 9.039870 CACCTCTCTCTTCATTAAATATGTGAC 57.960 37.037 0.00 0.00 0.00 3.67
378 385 7.712639 GCACCTCTCTCTTCATTAAATATGTGA 59.287 37.037 0.00 0.00 0.00 3.58
379 386 7.714377 AGCACCTCTCTCTTCATTAAATATGTG 59.286 37.037 0.00 0.00 0.00 3.21
380 387 7.800092 AGCACCTCTCTCTTCATTAAATATGT 58.200 34.615 0.00 0.00 0.00 2.29
381 388 8.557864 CAAGCACCTCTCTCTTCATTAAATATG 58.442 37.037 0.00 0.00 0.00 1.78
382 389 8.270744 ACAAGCACCTCTCTCTTCATTAAATAT 58.729 33.333 0.00 0.00 0.00 1.28
383 390 7.550551 CACAAGCACCTCTCTCTTCATTAAATA 59.449 37.037 0.00 0.00 0.00 1.40
384 391 6.373774 CACAAGCACCTCTCTCTTCATTAAAT 59.626 38.462 0.00 0.00 0.00 1.40
385 392 5.702670 CACAAGCACCTCTCTCTTCATTAAA 59.297 40.000 0.00 0.00 0.00 1.52
386 393 5.240891 CACAAGCACCTCTCTCTTCATTAA 58.759 41.667 0.00 0.00 0.00 1.40
387 394 4.323028 CCACAAGCACCTCTCTCTTCATTA 60.323 45.833 0.00 0.00 0.00 1.90
388 395 3.558746 CCACAAGCACCTCTCTCTTCATT 60.559 47.826 0.00 0.00 0.00 2.57
389 396 2.027377 CCACAAGCACCTCTCTCTTCAT 60.027 50.000 0.00 0.00 0.00 2.57
390 397 1.345741 CCACAAGCACCTCTCTCTTCA 59.654 52.381 0.00 0.00 0.00 3.02
391 398 1.346068 ACCACAAGCACCTCTCTCTTC 59.654 52.381 0.00 0.00 0.00 2.87
392 399 1.428869 ACCACAAGCACCTCTCTCTT 58.571 50.000 0.00 0.00 0.00 2.85
393 400 2.300437 GTTACCACAAGCACCTCTCTCT 59.700 50.000 0.00 0.00 0.00 3.10
394 401 2.300437 AGTTACCACAAGCACCTCTCTC 59.700 50.000 0.00 0.00 0.00 3.20
395 402 2.330216 AGTTACCACAAGCACCTCTCT 58.670 47.619 0.00 0.00 0.00 3.10
396 403 2.841442 AGTTACCACAAGCACCTCTC 57.159 50.000 0.00 0.00 0.00 3.20
397 404 2.028020 GCTAGTTACCACAAGCACCTCT 60.028 50.000 0.00 0.00 35.05 3.69
398 405 2.028020 AGCTAGTTACCACAAGCACCTC 60.028 50.000 0.00 0.00 37.44 3.85
399 406 1.978580 AGCTAGTTACCACAAGCACCT 59.021 47.619 0.00 0.00 37.44 4.00
400 407 2.474410 AGCTAGTTACCACAAGCACC 57.526 50.000 0.00 0.00 37.44 5.01
401 408 4.566987 ACTTAGCTAGTTACCACAAGCAC 58.433 43.478 0.00 0.00 37.44 4.40
402 409 4.884668 ACTTAGCTAGTTACCACAAGCA 57.115 40.909 0.00 0.00 37.44 3.91
411 418 6.377996 TGATGTTCCGGTAACTTAGCTAGTTA 59.622 38.462 0.00 10.09 45.22 2.24
413 420 4.708421 TGATGTTCCGGTAACTTAGCTAGT 59.292 41.667 0.00 0.00 38.99 2.57
414 421 5.041940 GTGATGTTCCGGTAACTTAGCTAG 58.958 45.833 0.00 0.00 38.99 3.42
415 422 4.463539 TGTGATGTTCCGGTAACTTAGCTA 59.536 41.667 0.00 0.00 38.99 3.32
416 423 3.259876 TGTGATGTTCCGGTAACTTAGCT 59.740 43.478 0.00 0.00 38.99 3.32
417 424 3.370061 GTGTGATGTTCCGGTAACTTAGC 59.630 47.826 0.00 0.00 38.99 3.09
418 425 4.387862 GTGTGTGATGTTCCGGTAACTTAG 59.612 45.833 0.00 0.00 38.99 2.18
419 426 4.039488 AGTGTGTGATGTTCCGGTAACTTA 59.961 41.667 0.00 0.00 38.99 2.24
420 427 3.135994 GTGTGTGATGTTCCGGTAACTT 58.864 45.455 0.00 3.15 38.99 2.66
421 428 2.367567 AGTGTGTGATGTTCCGGTAACT 59.632 45.455 0.00 0.00 38.99 2.24
422 429 2.735134 GAGTGTGTGATGTTCCGGTAAC 59.265 50.000 0.00 5.56 38.67 2.50
423 430 2.289195 GGAGTGTGTGATGTTCCGGTAA 60.289 50.000 0.00 0.00 0.00 2.85
424 431 1.274167 GGAGTGTGTGATGTTCCGGTA 59.726 52.381 0.00 0.00 0.00 4.02
425 432 0.034896 GGAGTGTGTGATGTTCCGGT 59.965 55.000 0.00 0.00 0.00 5.28
426 433 0.034756 TGGAGTGTGTGATGTTCCGG 59.965 55.000 0.00 0.00 0.00 5.14
427 434 1.800586 CTTGGAGTGTGTGATGTTCCG 59.199 52.381 0.00 0.00 0.00 4.30
428 435 3.126001 TCTTGGAGTGTGTGATGTTCC 57.874 47.619 0.00 0.00 0.00 3.62
429 436 4.335315 TGTTTCTTGGAGTGTGTGATGTTC 59.665 41.667 0.00 0.00 0.00 3.18
430 437 4.269183 TGTTTCTTGGAGTGTGTGATGTT 58.731 39.130 0.00 0.00 0.00 2.71
431 438 3.884895 TGTTTCTTGGAGTGTGTGATGT 58.115 40.909 0.00 0.00 0.00 3.06
432 439 4.898829 TTGTTTCTTGGAGTGTGTGATG 57.101 40.909 0.00 0.00 0.00 3.07
433 440 5.132502 TCATTGTTTCTTGGAGTGTGTGAT 58.867 37.500 0.00 0.00 0.00 3.06
434 441 4.522114 TCATTGTTTCTTGGAGTGTGTGA 58.478 39.130 0.00 0.00 0.00 3.58
435 442 4.898829 TCATTGTTTCTTGGAGTGTGTG 57.101 40.909 0.00 0.00 0.00 3.82
436 443 5.829924 AGATTCATTGTTTCTTGGAGTGTGT 59.170 36.000 0.00 0.00 0.00 3.72
437 444 6.323203 AGATTCATTGTTTCTTGGAGTGTG 57.677 37.500 0.00 0.00 0.00 3.82
438 445 9.739276 TTATAGATTCATTGTTTCTTGGAGTGT 57.261 29.630 0.00 0.00 0.00 3.55
439 446 9.994432 GTTATAGATTCATTGTTTCTTGGAGTG 57.006 33.333 0.00 0.00 0.00 3.51
440 447 9.178758 GGTTATAGATTCATTGTTTCTTGGAGT 57.821 33.333 0.00 0.00 0.00 3.85
441 448 9.401058 AGGTTATAGATTCATTGTTTCTTGGAG 57.599 33.333 0.00 0.00 0.00 3.86
463 470 9.801873 GTCATGCAACAATGTATTTATTAGGTT 57.198 29.630 0.00 0.00 28.42 3.50
464 471 8.965819 TGTCATGCAACAATGTATTTATTAGGT 58.034 29.630 0.00 0.00 28.42 3.08
465 472 9.236691 GTGTCATGCAACAATGTATTTATTAGG 57.763 33.333 0.00 0.00 28.42 2.69
468 475 9.787532 GTAGTGTCATGCAACAATGTATTTATT 57.212 29.630 1.88 0.00 28.42 1.40
469 476 8.955388 TGTAGTGTCATGCAACAATGTATTTAT 58.045 29.630 1.88 0.00 28.42 1.40
470 477 8.329203 TGTAGTGTCATGCAACAATGTATTTA 57.671 30.769 1.88 0.00 28.42 1.40
471 478 7.213216 TGTAGTGTCATGCAACAATGTATTT 57.787 32.000 1.88 0.00 28.42 1.40
472 479 6.816134 TGTAGTGTCATGCAACAATGTATT 57.184 33.333 1.88 0.00 28.42 1.89
473 480 7.986889 TCTATGTAGTGTCATGCAACAATGTAT 59.013 33.333 1.88 0.00 31.41 2.29
474 481 7.327214 TCTATGTAGTGTCATGCAACAATGTA 58.673 34.615 1.88 0.00 0.00 2.29
475 482 6.172630 TCTATGTAGTGTCATGCAACAATGT 58.827 36.000 1.88 0.00 0.00 2.71
476 483 6.667007 TCTATGTAGTGTCATGCAACAATG 57.333 37.500 1.88 0.00 0.00 2.82
477 484 6.825213 ACATCTATGTAGTGTCATGCAACAAT 59.175 34.615 0.00 0.00 39.68 2.71
478 485 6.172630 ACATCTATGTAGTGTCATGCAACAA 58.827 36.000 0.00 0.00 39.68 2.83
479 486 5.733676 ACATCTATGTAGTGTCATGCAACA 58.266 37.500 0.00 0.00 39.68 3.33
480 487 6.238211 GGAACATCTATGTAGTGTCATGCAAC 60.238 42.308 0.00 0.00 40.80 4.17
481 488 5.817296 GGAACATCTATGTAGTGTCATGCAA 59.183 40.000 0.00 0.00 40.80 4.08
482 489 5.129320 AGGAACATCTATGTAGTGTCATGCA 59.871 40.000 0.00 0.00 40.80 3.96
483 490 5.605534 AGGAACATCTATGTAGTGTCATGC 58.394 41.667 0.00 0.00 40.80 4.06
484 491 7.148641 GGTAGGAACATCTATGTAGTGTCATG 58.851 42.308 0.00 0.00 40.80 3.07
485 492 6.267928 GGGTAGGAACATCTATGTAGTGTCAT 59.732 42.308 0.00 0.00 40.80 3.06
486 493 5.597182 GGGTAGGAACATCTATGTAGTGTCA 59.403 44.000 0.00 0.00 40.80 3.58
487 494 5.597182 TGGGTAGGAACATCTATGTAGTGTC 59.403 44.000 0.00 0.00 40.80 3.67
488 495 5.525484 TGGGTAGGAACATCTATGTAGTGT 58.475 41.667 0.00 0.00 40.80 3.55
489 496 6.672266 ATGGGTAGGAACATCTATGTAGTG 57.328 41.667 0.00 0.00 40.80 2.74
490 497 6.615726 ACAATGGGTAGGAACATCTATGTAGT 59.384 38.462 0.00 0.00 40.80 2.73
491 498 6.931281 CACAATGGGTAGGAACATCTATGTAG 59.069 42.308 0.00 0.00 40.80 2.74
492 499 6.183361 CCACAATGGGTAGGAACATCTATGTA 60.183 42.308 0.00 0.00 35.14 2.29
493 500 5.397899 CCACAATGGGTAGGAACATCTATGT 60.398 44.000 0.00 0.00 36.83 2.29
494 501 5.065914 CCACAATGGGTAGGAACATCTATG 58.934 45.833 0.00 0.00 32.67 2.23
495 502 4.975147 TCCACAATGGGTAGGAACATCTAT 59.025 41.667 0.00 0.00 38.32 1.98
496 503 4.367166 TCCACAATGGGTAGGAACATCTA 58.633 43.478 0.00 0.00 38.32 1.98
497 504 3.189606 TCCACAATGGGTAGGAACATCT 58.810 45.455 0.00 0.00 38.32 2.90
498 505 3.545703 CTCCACAATGGGTAGGAACATC 58.454 50.000 0.00 0.00 38.32 3.06
499 506 2.242196 CCTCCACAATGGGTAGGAACAT 59.758 50.000 0.00 0.00 38.32 2.71
500 507 1.633432 CCTCCACAATGGGTAGGAACA 59.367 52.381 0.00 0.00 38.32 3.18
501 508 1.633945 ACCTCCACAATGGGTAGGAAC 59.366 52.381 0.00 0.00 38.32 3.62
502 509 2.053747 ACCTCCACAATGGGTAGGAA 57.946 50.000 0.00 0.00 38.32 3.36
503 510 2.759355 CTACCTCCACAATGGGTAGGA 58.241 52.381 0.00 0.00 45.09 2.94
506 513 4.427637 TGTTACTACCTCCACAATGGGTA 58.572 43.478 0.00 0.00 38.32 3.69
507 514 3.253220 TGTTACTACCTCCACAATGGGT 58.747 45.455 0.00 0.00 38.32 4.51
508 515 3.992943 TGTTACTACCTCCACAATGGG 57.007 47.619 0.00 0.00 38.32 4.00
509 516 6.098409 AGACTATGTTACTACCTCCACAATGG 59.902 42.308 0.00 0.00 39.43 3.16
510 517 7.113658 AGACTATGTTACTACCTCCACAATG 57.886 40.000 0.00 0.00 0.00 2.82
511 518 7.506261 CCTAGACTATGTTACTACCTCCACAAT 59.494 40.741 0.00 0.00 0.00 2.71
512 519 6.832384 CCTAGACTATGTTACTACCTCCACAA 59.168 42.308 0.00 0.00 0.00 3.33
513 520 6.363065 CCTAGACTATGTTACTACCTCCACA 58.637 44.000 0.00 0.00 0.00 4.17
514 521 5.769162 CCCTAGACTATGTTACTACCTCCAC 59.231 48.000 0.00 0.00 0.00 4.02
515 522 5.673574 TCCCTAGACTATGTTACTACCTCCA 59.326 44.000 0.00 0.00 0.00 3.86
516 523 6.198237 TCCCTAGACTATGTTACTACCTCC 57.802 45.833 0.00 0.00 0.00 4.30
517 524 7.229106 CACTTCCCTAGACTATGTTACTACCTC 59.771 44.444 0.00 0.00 0.00 3.85
518 525 7.061688 CACTTCCCTAGACTATGTTACTACCT 58.938 42.308 0.00 0.00 0.00 3.08
519 526 6.832900 ACACTTCCCTAGACTATGTTACTACC 59.167 42.308 0.00 0.00 0.00 3.18
520 527 7.338957 ACACACTTCCCTAGACTATGTTACTAC 59.661 40.741 0.00 0.00 0.00 2.73
521 528 7.408543 ACACACTTCCCTAGACTATGTTACTA 58.591 38.462 0.00 0.00 0.00 1.82
522 529 6.254522 ACACACTTCCCTAGACTATGTTACT 58.745 40.000 0.00 0.00 0.00 2.24
523 530 6.527057 ACACACTTCCCTAGACTATGTTAC 57.473 41.667 0.00 0.00 0.00 2.50
524 531 7.892241 ACTTACACACTTCCCTAGACTATGTTA 59.108 37.037 0.00 0.00 0.00 2.41
525 532 6.724905 ACTTACACACTTCCCTAGACTATGTT 59.275 38.462 0.00 0.00 0.00 2.71
526 533 6.254522 ACTTACACACTTCCCTAGACTATGT 58.745 40.000 0.00 0.00 0.00 2.29
527 534 6.777213 ACTTACACACTTCCCTAGACTATG 57.223 41.667 0.00 0.00 0.00 2.23
528 535 8.114743 AGTAACTTACACACTTCCCTAGACTAT 58.885 37.037 1.79 0.00 0.00 2.12
529 536 7.465116 AGTAACTTACACACTTCCCTAGACTA 58.535 38.462 1.79 0.00 0.00 2.59
530 537 6.313324 AGTAACTTACACACTTCCCTAGACT 58.687 40.000 1.79 0.00 0.00 3.24
531 538 6.587206 AGTAACTTACACACTTCCCTAGAC 57.413 41.667 1.79 0.00 0.00 2.59
532 539 7.609532 GTCTAGTAACTTACACACTTCCCTAGA 59.390 40.741 1.79 0.00 0.00 2.43
533 540 7.611079 AGTCTAGTAACTTACACACTTCCCTAG 59.389 40.741 1.79 0.00 0.00 3.02
534 541 7.465116 AGTCTAGTAACTTACACACTTCCCTA 58.535 38.462 1.79 0.00 0.00 3.53
535 542 6.313324 AGTCTAGTAACTTACACACTTCCCT 58.687 40.000 1.79 0.00 0.00 4.20
536 543 6.587206 AGTCTAGTAACTTACACACTTCCC 57.413 41.667 1.79 0.00 0.00 3.97
537 544 8.738106 ACATAGTCTAGTAACTTACACACTTCC 58.262 37.037 1.79 0.00 0.00 3.46
540 547 9.517868 AGAACATAGTCTAGTAACTTACACACT 57.482 33.333 1.79 3.11 0.00 3.55
543 550 9.074443 GCAAGAACATAGTCTAGTAACTTACAC 57.926 37.037 1.79 0.00 0.00 2.90
544 551 8.248945 GGCAAGAACATAGTCTAGTAACTTACA 58.751 37.037 1.79 0.00 0.00 2.41
545 552 7.705752 GGGCAAGAACATAGTCTAGTAACTTAC 59.294 40.741 0.00 0.00 0.00 2.34
546 553 7.398047 TGGGCAAGAACATAGTCTAGTAACTTA 59.602 37.037 0.00 0.00 0.00 2.24
547 554 6.212791 TGGGCAAGAACATAGTCTAGTAACTT 59.787 38.462 0.00 0.00 0.00 2.66
548 555 5.720041 TGGGCAAGAACATAGTCTAGTAACT 59.280 40.000 0.00 0.00 0.00 2.24
549 556 5.974108 TGGGCAAGAACATAGTCTAGTAAC 58.026 41.667 0.00 0.00 0.00 2.50
550 557 6.808321 ATGGGCAAGAACATAGTCTAGTAA 57.192 37.500 0.00 0.00 0.00 2.24
551 558 6.156256 ACAATGGGCAAGAACATAGTCTAGTA 59.844 38.462 0.00 0.00 0.00 1.82
552 559 5.045578 ACAATGGGCAAGAACATAGTCTAGT 60.046 40.000 0.00 0.00 0.00 2.57
553 560 5.295292 CACAATGGGCAAGAACATAGTCTAG 59.705 44.000 0.00 0.00 0.00 2.43
554 561 5.045942 TCACAATGGGCAAGAACATAGTCTA 60.046 40.000 0.00 0.00 0.00 2.59
555 562 4.012374 CACAATGGGCAAGAACATAGTCT 58.988 43.478 0.00 0.00 0.00 3.24
556 563 4.009675 TCACAATGGGCAAGAACATAGTC 58.990 43.478 0.00 0.00 0.00 2.59
557 564 3.758554 GTCACAATGGGCAAGAACATAGT 59.241 43.478 0.00 0.00 0.00 2.12
558 565 3.129287 GGTCACAATGGGCAAGAACATAG 59.871 47.826 0.00 0.00 0.00 2.23
559 566 3.088532 GGTCACAATGGGCAAGAACATA 58.911 45.455 0.00 0.00 0.00 2.29
560 567 1.895131 GGTCACAATGGGCAAGAACAT 59.105 47.619 0.00 0.00 0.00 2.71
561 568 1.327303 GGTCACAATGGGCAAGAACA 58.673 50.000 0.00 0.00 0.00 3.18
562 569 1.270550 CTGGTCACAATGGGCAAGAAC 59.729 52.381 0.00 0.00 0.00 3.01
563 570 1.619654 CTGGTCACAATGGGCAAGAA 58.380 50.000 0.00 0.00 0.00 2.52
564 571 0.895100 GCTGGTCACAATGGGCAAGA 60.895 55.000 0.00 0.00 0.00 3.02
565 572 1.588082 GCTGGTCACAATGGGCAAG 59.412 57.895 0.00 0.00 0.00 4.01
566 573 1.907807 GGCTGGTCACAATGGGCAA 60.908 57.895 0.00 0.00 0.00 4.52
567 574 1.496444 TAGGCTGGTCACAATGGGCA 61.496 55.000 0.00 0.00 0.00 5.36
568 575 0.323360 TTAGGCTGGTCACAATGGGC 60.323 55.000 0.00 0.00 0.00 5.36
569 576 2.026641 CATTAGGCTGGTCACAATGGG 58.973 52.381 0.00 0.00 0.00 4.00
570 577 1.406539 GCATTAGGCTGGTCACAATGG 59.593 52.381 0.00 0.00 40.25 3.16
571 578 2.857592 GCATTAGGCTGGTCACAATG 57.142 50.000 0.00 0.00 40.25 2.82
583 590 3.983344 GCATTTATTTCGCCAGCATTAGG 59.017 43.478 0.00 0.00 0.00 2.69
584 591 4.678287 CAGCATTTATTTCGCCAGCATTAG 59.322 41.667 0.00 0.00 0.00 1.73
639 646 1.142097 GGCCGCAGTCCTCTAGAAC 59.858 63.158 0.00 0.00 0.00 3.01
712 720 3.211865 GAAATCCCCGTCCATTTCTACC 58.788 50.000 0.00 0.00 36.47 3.18
795 803 3.294493 GGTGGCTTTGGCTTGCGA 61.294 61.111 0.00 0.00 38.73 5.10
806 814 1.464198 AGGGAAGAAGGTGGTGGCT 60.464 57.895 0.00 0.00 0.00 4.75
898 906 4.394712 GGGTGAGGTGGGACTGCG 62.395 72.222 0.00 0.00 0.00 5.18
935 943 0.868406 GGTGTGTTTCAAGCCTCTCG 59.132 55.000 0.00 0.00 0.00 4.04
938 946 0.534203 TCGGGTGTGTTTCAAGCCTC 60.534 55.000 0.00 0.00 0.00 4.70
953 961 1.204704 GATTTCCAAGGGCTTTTCGGG 59.795 52.381 0.00 0.00 0.00 5.14
1071 1079 3.164011 CGCGAGAACACGTCGTCC 61.164 66.667 0.00 0.00 39.69 4.79
1143 1151 3.379445 CGGTCGTAGGTGGGCAGT 61.379 66.667 0.00 0.00 0.00 4.40
1599 1617 1.203523 GATCTCTTCCACTCACACGCT 59.796 52.381 0.00 0.00 0.00 5.07
1606 1624 6.998968 ACAAATCAATGATCTCTTCCACTC 57.001 37.500 0.00 0.00 0.00 3.51
1733 1751 3.006967 AGAGATGTTTTGACTACCTGCGT 59.993 43.478 0.00 0.00 0.00 5.24
1788 1806 1.141053 AGAGCATGAGCATGAGCATGA 59.859 47.619 24.01 0.00 45.49 3.07
1789 1807 1.265365 CAGAGCATGAGCATGAGCATG 59.735 52.381 18.51 18.51 45.49 4.06
1790 1808 1.598882 CAGAGCATGAGCATGAGCAT 58.401 50.000 14.27 0.00 45.49 3.79
1791 1809 1.095807 GCAGAGCATGAGCATGAGCA 61.096 55.000 14.27 0.00 45.49 4.26
1792 1810 0.816018 AGCAGAGCATGAGCATGAGC 60.816 55.000 14.27 10.87 45.49 4.26
1793 1811 1.332065 CAAGCAGAGCATGAGCATGAG 59.668 52.381 14.27 2.30 45.49 2.90
1794 1812 1.379527 CAAGCAGAGCATGAGCATGA 58.620 50.000 14.27 0.00 45.49 3.07
1795 1813 0.248661 GCAAGCAGAGCATGAGCATG 60.249 55.000 6.11 6.11 45.49 4.06
1796 1814 1.384989 GGCAAGCAGAGCATGAGCAT 61.385 55.000 0.00 0.00 45.49 3.79
1797 1815 2.044555 GGCAAGCAGAGCATGAGCA 61.045 57.895 0.00 0.00 45.49 4.26
1798 1816 1.749638 AGGCAAGCAGAGCATGAGC 60.750 57.895 0.00 0.00 42.56 4.26
1799 1817 1.994507 GCAGGCAAGCAGAGCATGAG 61.995 60.000 12.70 0.00 45.78 2.90
1880 1904 2.271800 GAGCGATGAATGAAACCGAGT 58.728 47.619 0.00 0.00 0.00 4.18
2410 2434 7.589958 ACACACAGAAACCACCAAAATATTA 57.410 32.000 0.00 0.00 0.00 0.98
2989 3014 0.250597 AGTTGTACGTTTCAGGGGCC 60.251 55.000 0.00 0.00 0.00 5.80
3013 3038 5.709594 TCAGAGAGGAGGATAATGTCATCA 58.290 41.667 0.00 0.00 39.36 3.07
3022 3047 1.505098 TGGCCATCAGAGAGGAGGATA 59.495 52.381 0.00 0.00 0.00 2.59
3067 3092 3.251004 ACTCAAAGAATTCAAGCACGTCC 59.749 43.478 8.44 0.00 0.00 4.79
3085 3110 1.140852 CACTTGAACCCCACAGACTCA 59.859 52.381 0.00 0.00 0.00 3.41
3112 3137 1.522580 GTCAGCGATGCCCTTCCTC 60.523 63.158 0.00 0.00 0.00 3.71
3122 3147 2.344950 CTCTTGCAAGAAGTCAGCGAT 58.655 47.619 28.16 0.00 34.03 4.58
3127 3152 4.689612 AAGTACCTCTTGCAAGAAGTCA 57.310 40.909 29.33 15.64 34.77 3.41
3150 3175 1.477553 AGGTGGTAGCAATGGCAATG 58.522 50.000 0.00 0.00 44.61 2.82
3162 3187 5.034200 ACCCATTCAGTACATAAGGTGGTA 58.966 41.667 0.00 0.00 0.00 3.25
3200 3228 8.771766 CCTATTCATTAATCACACAGAGACATG 58.228 37.037 0.00 0.00 0.00 3.21
3201 3229 8.489489 ACCTATTCATTAATCACACAGAGACAT 58.511 33.333 0.00 0.00 0.00 3.06
3205 3233 7.984050 AGTCACCTATTCATTAATCACACAGAG 59.016 37.037 0.00 0.00 0.00 3.35
3209 3237 7.491372 TCGAAGTCACCTATTCATTAATCACAC 59.509 37.037 0.00 0.00 0.00 3.82
3212 3242 8.474831 TCTTCGAAGTCACCTATTCATTAATCA 58.525 33.333 23.85 0.00 0.00 2.57
3221 3251 6.936279 TGATCTTTCTTCGAAGTCACCTATT 58.064 36.000 23.85 4.06 0.00 1.73
3357 3387 0.035317 TGCTCTTGTCGAATGGCACT 59.965 50.000 0.00 0.00 0.00 4.40
3570 3600 1.972872 ATGAGGGAATTCGTCATGCC 58.027 50.000 17.01 4.94 45.81 4.40
3579 3609 6.484288 TGTAATGTCAGAACATGAGGGAATT 58.516 36.000 0.00 0.00 45.48 2.17
3590 3620 4.764172 AGGATCAGCTGTAATGTCAGAAC 58.236 43.478 14.67 0.00 37.61 3.01
3661 3691 1.003812 CCCCCATTTGTTACCGAGTCA 59.996 52.381 0.00 0.00 0.00 3.41
3670 3700 2.917713 TGTAGATGCCCCCATTTGTT 57.082 45.000 0.00 0.00 0.00 2.83
3787 3817 3.454858 TGCTGGGTAGAAAAGGAGATCT 58.545 45.455 0.00 0.00 0.00 2.75
3790 3820 2.239654 CCATGCTGGGTAGAAAAGGAGA 59.760 50.000 0.00 0.00 32.67 3.71
3939 3969 5.209977 GCGTAGTTGTTAACCAAAAAGAGG 58.790 41.667 2.48 0.00 34.07 3.69
4003 4033 2.158900 AGAACCTGGTTGATGGATAGCG 60.159 50.000 18.42 0.00 0.00 4.26
4524 4554 0.321919 GCATGCACTCACCCTTCAGA 60.322 55.000 14.21 0.00 0.00 3.27
4538 4568 4.952262 TGATCAAACTAGTTCTGCATGC 57.048 40.909 11.82 11.82 0.00 4.06
4701 4731 0.617935 TGGTGATTCCAGGCGATCAA 59.382 50.000 6.85 0.00 41.93 2.57
5665 5712 2.166459 TGGTAGAAATCTCCGCTGTGAG 59.834 50.000 0.00 0.00 0.00 3.51
5700 5747 7.613801 AGATCACACTTCTACAGTAGAGAATGT 59.386 37.037 10.27 12.37 35.96 2.71
6000 6047 5.990120 AGCCATCTTTAATTTTGCTGACT 57.010 34.783 0.00 0.00 0.00 3.41
6080 6127 9.112725 TCTTGTATATGTCACTGAAATCAATGG 57.887 33.333 0.00 0.00 0.00 3.16
6150 6197 9.293404 CCATCTAATGTGATTCCAAATGACTAT 57.707 33.333 0.00 0.00 0.00 2.12
6151 6198 8.274322 ACCATCTAATGTGATTCCAAATGACTA 58.726 33.333 0.00 0.00 0.00 2.59
6152 6199 7.121382 ACCATCTAATGTGATTCCAAATGACT 58.879 34.615 0.00 0.00 0.00 3.41
6153 6200 7.067372 TGACCATCTAATGTGATTCCAAATGAC 59.933 37.037 0.00 0.00 0.00 3.06
6154 6201 7.118060 TGACCATCTAATGTGATTCCAAATGA 58.882 34.615 0.00 0.00 0.00 2.57
6155 6202 7.337480 TGACCATCTAATGTGATTCCAAATG 57.663 36.000 0.00 0.00 0.00 2.32
6156 6203 7.069085 CCTTGACCATCTAATGTGATTCCAAAT 59.931 37.037 0.00 0.00 0.00 2.32
6157 6204 6.377996 CCTTGACCATCTAATGTGATTCCAAA 59.622 38.462 0.00 0.00 0.00 3.28
6158 6205 5.887598 CCTTGACCATCTAATGTGATTCCAA 59.112 40.000 0.00 0.00 0.00 3.53
6159 6206 5.191522 TCCTTGACCATCTAATGTGATTCCA 59.808 40.000 0.00 0.00 0.00 3.53
6160 6207 5.684704 TCCTTGACCATCTAATGTGATTCC 58.315 41.667 0.00 0.00 0.00 3.01
6161 6208 7.121168 TGTTTCCTTGACCATCTAATGTGATTC 59.879 37.037 0.00 0.00 0.00 2.52
6162 6209 6.947733 TGTTTCCTTGACCATCTAATGTGATT 59.052 34.615 0.00 0.00 0.00 2.57
6163 6210 6.484288 TGTTTCCTTGACCATCTAATGTGAT 58.516 36.000 0.00 0.00 0.00 3.06
6164 6211 5.875224 TGTTTCCTTGACCATCTAATGTGA 58.125 37.500 0.00 0.00 0.00 3.58
6165 6212 6.764308 ATGTTTCCTTGACCATCTAATGTG 57.236 37.500 0.00 0.00 0.00 3.21
6631 6869 1.602888 CTGCTTCCACAGGCAAGCT 60.603 57.895 15.85 0.00 44.59 3.74
6826 7064 3.055094 TGACTGGCTCCTGGAATAAGAAC 60.055 47.826 0.00 0.00 0.00 3.01
7026 7264 6.945435 TGAGCACCTGGAACTTTGAATAATAA 59.055 34.615 0.00 0.00 0.00 1.40
7102 7340 5.470098 TGACAACCTGCAATAGAGAAGTTTC 59.530 40.000 0.00 0.00 0.00 2.78
7162 7400 4.611310 TCGAGTAAACTATGACTCCGTG 57.389 45.455 0.00 0.00 39.15 4.94
7552 7790 1.018752 CCATCGGCGTTGTGACATCA 61.019 55.000 15.96 0.00 0.00 3.07
7688 7926 3.159472 TGAGCTTCATGATGGCAAAACT 58.841 40.909 18.91 4.48 0.00 2.66
7787 8025 7.108847 TGTGGTCAAATGATATGTACACATCA 58.891 34.615 18.63 18.63 37.76 3.07
7872 8235 4.371855 TTCGTGTGGTGCAAAATGTTTA 57.628 36.364 0.00 0.00 0.00 2.01
7959 8323 0.958382 TGCCCGTGGTATTGAGTTGC 60.958 55.000 0.00 0.00 0.00 4.17
7975 8339 4.669318 CATCATCAATGTCTCAAGTTGCC 58.331 43.478 0.00 0.00 0.00 4.52
8030 8394 6.306987 TGCCTAAGATCTTGGTTTTCTTTCT 58.693 36.000 18.47 0.00 32.28 2.52
8031 8395 6.575162 TGCCTAAGATCTTGGTTTTCTTTC 57.425 37.500 18.47 3.44 32.28 2.62
8033 8397 6.012745 ACATGCCTAAGATCTTGGTTTTCTT 58.987 36.000 18.47 0.43 34.29 2.52
8035 8399 5.904362 ACATGCCTAAGATCTTGGTTTTC 57.096 39.130 18.47 4.76 0.00 2.29
8064 8433 4.992319 CCGTAGTGGTCAATGTCTTTGTTA 59.008 41.667 0.00 0.00 36.65 2.41
8095 8478 2.235402 TCCGTCTTTAAAGGCTCCGAAT 59.765 45.455 17.28 0.00 0.00 3.34
8139 8522 4.875536 GGTTTTGAAGTTGCAAAGGATTGT 59.124 37.500 0.00 0.00 38.80 2.71
8158 8541 5.876357 TCATTAGTGCTTAAGACCAGGTTT 58.124 37.500 6.67 0.00 0.00 3.27
8193 8576 3.562182 TCTTTGTTGAAAGGACCTTCCC 58.438 45.455 7.34 3.46 39.36 3.97
8199 8582 5.765182 TCAATCTCCTCTTTGTTGAAAGGAC 59.235 40.000 0.00 0.00 39.36 3.85
8232 8615 1.328680 CGTCAGCAGGCATATGTTCAC 59.671 52.381 4.29 0.00 0.00 3.18
8313 8696 3.057736 CCAATGAGTTTGCAGAAGTCCAG 60.058 47.826 11.48 4.67 33.73 3.86
8346 8729 6.263754 TGCTCTCCATATTGATATGACCCTA 58.736 40.000 11.60 0.00 42.05 3.53
8372 8755 7.325694 GGATCATGGTGATGAAGAAACAATTT 58.674 34.615 0.00 0.00 42.02 1.82
8377 8760 4.530875 AGGGATCATGGTGATGAAGAAAC 58.469 43.478 0.00 0.00 42.02 2.78
8413 8796 0.974383 GTGAAGTCCCCGGAAGAGAA 59.026 55.000 0.73 0.00 0.00 2.87
8418 8801 0.178926 TAGGTGTGAAGTCCCCGGAA 60.179 55.000 0.73 0.00 0.00 4.30
8451 8837 3.243670 TGGTGAGAATTTTCAATGCGCAA 60.244 39.130 17.11 0.00 0.00 4.85
8458 8844 6.572519 CCAGAAGTTTGGTGAGAATTTTCAA 58.427 36.000 0.00 0.00 33.38 2.69
8484 8870 4.892934 AGAATGGTCCTTTGCACTTTGTTA 59.107 37.500 0.00 0.00 0.00 2.41
8489 8875 6.670695 ATTTAAGAATGGTCCTTTGCACTT 57.329 33.333 0.00 0.00 0.00 3.16
8643 9029 5.007385 AGCAGATCAAATCAAATGCCTTC 57.993 39.130 0.00 0.00 34.24 3.46
8656 9042 4.910195 AGTGTTATGGTCAAGCAGATCAA 58.090 39.130 0.00 0.00 41.60 2.57
8657 9043 4.558226 AGTGTTATGGTCAAGCAGATCA 57.442 40.909 0.00 0.00 42.70 2.92
8658 9044 6.283694 TGATAGTGTTATGGTCAAGCAGATC 58.716 40.000 0.00 0.00 0.00 2.75
8659 9045 6.239217 TGATAGTGTTATGGTCAAGCAGAT 57.761 37.500 0.00 0.00 0.00 2.90
8660 9046 5.675684 TGATAGTGTTATGGTCAAGCAGA 57.324 39.130 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.