Multiple sequence alignment - TraesCS3A01G217800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G217800 chr3A 100.000 4446 0 0 1 4446 398887055 398882610 0.000000e+00 8211.0
1 TraesCS3A01G217800 chr3A 100.000 2425 0 0 4754 7178 398882302 398879878 0.000000e+00 4479.0
2 TraesCS3A01G217800 chr3A 95.368 367 14 2 6796 7159 398878781 398879147 1.340000e-161 580.0
3 TraesCS3A01G217800 chr3A 83.611 360 46 11 2026 2377 644936588 644936942 6.940000e-85 326.0
4 TraesCS3A01G217800 chr3D 90.863 3360 117 57 473 3766 323691891 323695126 0.000000e+00 4329.0
5 TraesCS3A01G217800 chr3D 92.875 2007 77 23 4756 6720 323697684 323699666 0.000000e+00 2854.0
6 TraesCS3A01G217800 chr3D 92.180 422 20 4 1 409 323676505 323676926 1.040000e-162 584.0
7 TraesCS3A01G217800 chr3D 97.797 227 5 0 3804 4030 323695118 323695344 6.750000e-105 392.0
8 TraesCS3A01G217800 chr3D 83.611 360 46 11 2026 2377 506712861 506713215 6.940000e-85 326.0
9 TraesCS3A01G217800 chr3D 91.480 223 9 6 4026 4244 323695372 323695588 1.510000e-76 298.0
10 TraesCS3A01G217800 chr3D 91.228 114 1 4 4342 4446 323697569 323697682 5.800000e-31 147.0
11 TraesCS3A01G217800 chr3B 90.789 3333 143 54 503 3766 395385836 395382599 0.000000e+00 4303.0
12 TraesCS3A01G217800 chr3B 91.842 1471 63 15 4754 6181 395381372 395379916 0.000000e+00 1999.0
13 TraesCS3A01G217800 chr3B 91.650 515 30 8 1 506 395400208 395399698 0.000000e+00 701.0
14 TraesCS3A01G217800 chr3B 94.631 447 19 5 6274 6716 395379586 395379141 0.000000e+00 688.0
15 TraesCS3A01G217800 chr3B 95.595 227 10 0 3804 4030 395382607 395382381 1.470000e-96 364.0
16 TraesCS3A01G217800 chr3B 93.243 222 8 3 4026 4244 395382327 395382110 3.230000e-83 320.0
17 TraesCS3A01G217800 chr3B 100.000 37 0 0 3767 3803 413806268 413806304 1.290000e-07 69.4
18 TraesCS3A01G217800 chr5D 83.076 1489 194 40 947 2406 33026670 33025211 0.000000e+00 1301.0
19 TraesCS3A01G217800 chr5D 90.448 670 55 7 5517 6177 33023065 33022396 0.000000e+00 874.0
20 TraesCS3A01G217800 chr5B 83.442 1383 182 31 1022 2387 24116443 24115091 0.000000e+00 1242.0
21 TraesCS3A01G217800 chr5B 88.609 676 68 6 5517 6183 24113932 24113257 0.000000e+00 813.0
22 TraesCS3A01G217800 chr5A 82.932 1371 189 32 1022 2377 21434450 21433110 0.000000e+00 1194.0
23 TraesCS3A01G217800 chr5A 88.657 670 67 6 5517 6177 21431464 21430795 0.000000e+00 808.0
24 TraesCS3A01G217800 chr7D 89.803 559 37 9 880 1430 104923218 104922672 0.000000e+00 699.0
25 TraesCS3A01G217800 chr7D 100.000 37 0 0 3767 3803 13396581 13396617 1.290000e-07 69.4
26 TraesCS3A01G217800 chr7A 97.727 352 6 1 6810 7159 661260401 661260050 7.960000e-169 604.0
27 TraesCS3A01G217800 chr7A 97.443 352 7 1 6810 7159 424299611 424299962 3.710000e-167 599.0
28 TraesCS3A01G217800 chr7A 97.443 352 7 1 6810 7159 679920569 679920920 3.710000e-167 599.0
29 TraesCS3A01G217800 chr7A 100.000 38 0 0 3766 3803 704255224 704255187 3.590000e-08 71.3
30 TraesCS3A01G217800 chr6A 97.167 353 8 1 6809 7159 116814421 116814069 4.790000e-166 595.0
31 TraesCS3A01G217800 chr6A 88.281 384 25 9 880 1256 539235229 539234859 6.610000e-120 442.0
32 TraesCS3A01G217800 chr4A 97.159 352 8 1 6810 7159 626089979 626089628 1.720000e-165 593.0
33 TraesCS3A01G217800 chr4A 80.451 133 21 4 5885 6016 180397955 180398083 5.930000e-16 97.1
34 TraesCS3A01G217800 chr4A 100.000 37 0 0 3767 3803 36282952 36282916 1.290000e-07 69.4
35 TraesCS3A01G217800 chr4A 100.000 37 0 0 3767 3803 46564151 46564115 1.290000e-07 69.4
36 TraesCS3A01G217800 chr4A 100.000 37 0 0 3767 3803 570970376 570970412 1.290000e-07 69.4
37 TraesCS3A01G217800 chr4B 96.893 354 9 1 6808 7159 22209520 22209873 6.200000e-165 592.0
38 TraesCS3A01G217800 chr4B 80.070 286 49 8 2093 2374 500256016 500255735 9.440000e-49 206.0
39 TraesCS3A01G217800 chr4B 91.667 72 6 0 5885 5956 375137354 375137283 4.580000e-17 100.0
40 TraesCS3A01G217800 chr1B 97.151 351 7 2 6811 7159 422452776 422453125 2.230000e-164 590.0
41 TraesCS3A01G217800 chr2B 96.875 352 9 1 6810 7159 712610205 712610556 8.020000e-164 588.0
42 TraesCS3A01G217800 chr4D 80.070 286 49 8 2093 2374 403398183 403397902 9.440000e-49 206.0
43 TraesCS3A01G217800 chr4D 81.203 133 20 5 5885 6016 301299489 301299361 1.270000e-17 102.0
44 TraesCS3A01G217800 chr7B 100.000 37 0 0 3767 3803 174072972 174072936 1.290000e-07 69.4
45 TraesCS3A01G217800 chr6B 100.000 37 0 0 3767 3803 40203351 40203315 1.290000e-07 69.4
46 TraesCS3A01G217800 chr6B 100.000 37 0 0 3767 3803 720829364 720829328 1.290000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G217800 chr3A 398879878 398887055 7177 True 6345.0 8211 100.0000 1 7178 2 chr3A.!!$R1 7177
1 TraesCS3A01G217800 chr3D 323691891 323699666 7775 False 1604.0 4329 92.8486 473 6720 5 chr3D.!!$F3 6247
2 TraesCS3A01G217800 chr3B 395379141 395385836 6695 True 1534.8 4303 93.2200 503 6716 5 chr3B.!!$R2 6213
3 TraesCS3A01G217800 chr3B 395399698 395400208 510 True 701.0 701 91.6500 1 506 1 chr3B.!!$R1 505
4 TraesCS3A01G217800 chr5D 33022396 33026670 4274 True 1087.5 1301 86.7620 947 6177 2 chr5D.!!$R1 5230
5 TraesCS3A01G217800 chr5B 24113257 24116443 3186 True 1027.5 1242 86.0255 1022 6183 2 chr5B.!!$R1 5161
6 TraesCS3A01G217800 chr5A 21430795 21434450 3655 True 1001.0 1194 85.7945 1022 6177 2 chr5A.!!$R1 5155
7 TraesCS3A01G217800 chr7D 104922672 104923218 546 True 699.0 699 89.8030 880 1430 1 chr7D.!!$R1 550


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
833 866 0.302890 CTACCGTACACTAGTCGCCG 59.697 60.0 0.00 0.00 0.00 6.46 F
2615 2714 0.588980 GCGTCGGGCGAAAATTCATC 60.589 55.0 6.02 0.00 44.77 2.92 F
2616 2715 0.724549 CGTCGGGCGAAAATTCATCA 59.275 50.0 0.00 0.00 44.77 3.07 F
3790 4671 0.238025 TTGATGTGCACACGACATGC 59.762 50.0 24.37 6.31 43.68 4.06 F
4427 7275 0.514691 CGTGCTTCCTTGCTCTGTTC 59.485 55.0 0.00 0.00 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2640 2739 0.098376 CGTCGCTAGCGTAAAGGAGT 59.902 55.0 34.10 0.00 40.74 3.85 R
3771 4652 0.238025 GCATGTCGTGTGCACATCAA 59.762 50.0 24.69 9.80 42.08 2.57 R
3804 4685 0.249322 GCAGCGTACACCCGTATGAT 60.249 55.0 0.00 0.00 36.84 2.45 R
5182 8112 0.182537 TGGTCCATGATTAAGGGGCG 59.817 55.0 0.00 0.00 0.00 6.13 R
6219 9449 0.105593 ACATGACATAGAGGCGCCAG 59.894 55.0 31.54 14.95 0.00 4.85 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 2.426522 TCCATCTGCTCGTTTTCCTTG 58.573 47.619 0.00 0.00 0.00 3.61
71 72 4.082463 TCTGCTCGTTTTCCTTGTTGTTTT 60.082 37.500 0.00 0.00 0.00 2.43
82 83 6.207691 TCCTTGTTGTTTTCTTTTCCTCTG 57.792 37.500 0.00 0.00 0.00 3.35
91 92 0.600255 CTTTTCCTCTGCGTGGTCGT 60.600 55.000 0.00 0.00 39.49 4.34
92 93 0.599204 TTTTCCTCTGCGTGGTCGTC 60.599 55.000 0.00 0.00 39.49 4.20
93 94 2.742710 TTTCCTCTGCGTGGTCGTCG 62.743 60.000 0.00 0.00 39.49 5.12
177 178 2.744202 CGATGTTCTTTGGTTGCTAGCT 59.256 45.455 17.23 0.00 0.00 3.32
189 190 3.375299 GGTTGCTAGCTGGTGTTATTCTG 59.625 47.826 17.23 0.00 0.00 3.02
202 203 4.857588 GTGTTATTCTGTCGACGACATTCT 59.142 41.667 29.29 18.35 41.94 2.40
218 219 9.145865 GACGACATTCTTTCTTTCTATCTTTCT 57.854 33.333 0.00 0.00 0.00 2.52
269 274 1.298859 GCTGCACCCTCCAAACTACG 61.299 60.000 0.00 0.00 0.00 3.51
293 298 0.738389 CCGTGGAAGGCGCAATTAAT 59.262 50.000 10.83 0.00 0.00 1.40
311 316 7.703621 GCAATTAATAAAGCAAGATCAAGCTCA 59.296 33.333 11.66 4.73 40.90 4.26
317 322 5.979288 AAGCAAGATCAAGCTCATCTTTT 57.021 34.783 15.21 8.16 40.90 2.27
323 328 4.948621 AGATCAAGCTCATCTTTTTGAGGG 59.051 41.667 2.83 0.00 42.78 4.30
325 330 4.927049 TCAAGCTCATCTTTTTGAGGGAT 58.073 39.130 3.85 0.00 42.78 3.85
332 337 6.459435 GCTCATCTTTTTGAGGGATTAAGCTC 60.459 42.308 3.85 0.00 42.78 4.09
390 397 4.146616 CGGTATCGAGATGACGAATTGAAC 59.853 45.833 0.00 0.00 45.16 3.18
396 403 0.447801 ATGACGAATTGAACTGCGCC 59.552 50.000 4.18 0.00 0.00 6.53
426 436 7.602753 CCTACTCCCATTTTTAACTGGAAAAG 58.397 38.462 0.82 0.00 34.24 2.27
427 437 7.450323 CCTACTCCCATTTTTAACTGGAAAAGA 59.550 37.037 0.82 0.00 34.24 2.52
428 438 7.050970 ACTCCCATTTTTAACTGGAAAAGAC 57.949 36.000 0.82 0.00 34.24 3.01
430 440 7.290014 ACTCCCATTTTTAACTGGAAAAGACAT 59.710 33.333 0.82 0.00 34.24 3.06
448 458 2.499289 ACATACTCTTGGCTGGACAGAG 59.501 50.000 3.00 0.00 0.00 3.35
465 475 3.244561 ACAGAGTGTTATCCCCAACTGTG 60.245 47.826 0.00 0.00 39.22 3.66
467 477 3.074412 GAGTGTTATCCCCAACTGTGTG 58.926 50.000 0.00 0.00 0.00 3.82
484 494 2.585247 GTGTATCGCAGACGGGCC 60.585 66.667 0.00 0.00 42.51 5.80
526 536 3.470709 CTGCAGATGGTCAATCCGTATT 58.529 45.455 8.42 0.00 39.52 1.89
591 601 1.512734 GCACCAGCATTTTCGAGCG 60.513 57.895 0.00 0.00 41.58 5.03
599 609 0.508641 CATTTTCGAGCGCTATCCCG 59.491 55.000 11.50 10.42 0.00 5.14
628 638 4.959596 TCGTATTCTATCGTATCCAGCC 57.040 45.455 0.00 0.00 0.00 4.85
719 729 1.081242 GTCCAAACACATGGCAGCG 60.081 57.895 0.00 0.00 40.46 5.18
722 755 4.041917 AAACACATGGCAGCGCGG 62.042 61.111 8.83 2.11 0.00 6.46
780 813 2.034879 AGTGTGCCATTTCGAGCCG 61.035 57.895 0.00 0.00 0.00 5.52
781 814 2.032634 GTGTGCCATTTCGAGCCGA 61.033 57.895 0.00 0.00 0.00 5.54
782 815 1.741401 TGTGCCATTTCGAGCCGAG 60.741 57.895 0.00 0.00 37.14 4.63
783 816 2.819595 TGCCATTTCGAGCCGAGC 60.820 61.111 0.00 0.00 37.14 5.03
784 817 3.577313 GCCATTTCGAGCCGAGCC 61.577 66.667 0.00 0.00 37.14 4.70
827 860 1.100510 TGCCAGCTACCGTACACTAG 58.899 55.000 0.00 0.00 0.00 2.57
833 866 0.302890 CTACCGTACACTAGTCGCCG 59.697 60.000 0.00 0.00 0.00 6.46
851 884 1.301479 GGTCCGTCAGTCACCAACC 60.301 63.158 0.00 0.00 0.00 3.77
852 885 1.301479 GTCCGTCAGTCACCAACCC 60.301 63.158 0.00 0.00 0.00 4.11
853 886 1.762858 TCCGTCAGTCACCAACCCA 60.763 57.895 0.00 0.00 0.00 4.51
854 887 1.147376 CCGTCAGTCACCAACCCAA 59.853 57.895 0.00 0.00 0.00 4.12
855 888 1.164041 CCGTCAGTCACCAACCCAAC 61.164 60.000 0.00 0.00 0.00 3.77
856 889 1.164041 CGTCAGTCACCAACCCAACC 61.164 60.000 0.00 0.00 0.00 3.77
857 890 0.822121 GTCAGTCACCAACCCAACCC 60.822 60.000 0.00 0.00 0.00 4.11
858 891 1.896660 CAGTCACCAACCCAACCCG 60.897 63.158 0.00 0.00 0.00 5.28
859 892 2.193786 GTCACCAACCCAACCCGT 59.806 61.111 0.00 0.00 0.00 5.28
949 982 4.673375 CCACCAAGGCAGGCAGCT 62.673 66.667 0.81 0.00 44.79 4.24
951 984 4.357279 ACCAAGGCAGGCAGCTCC 62.357 66.667 0.81 0.00 44.79 4.70
952 985 4.355720 CCAAGGCAGGCAGCTCCA 62.356 66.667 0.81 0.00 44.79 3.86
953 986 3.060615 CAAGGCAGGCAGCTCCAC 61.061 66.667 0.81 0.00 44.79 4.02
1575 1641 2.648059 CCGGAGCTCAAGGATTTCAAT 58.352 47.619 19.32 0.00 0.00 2.57
2381 2465 4.803426 GCTCCACGGTCAGCCTCG 62.803 72.222 0.00 0.00 0.00 4.63
2447 2546 4.923871 AGTACATTGTATCGAATCGCCATC 59.076 41.667 0.00 0.00 0.00 3.51
2514 2613 3.857854 CGCACTCGCAGCATCACC 61.858 66.667 0.00 0.00 38.40 4.02
2538 2637 2.045926 CCTGCTACCCGCTTTGCT 60.046 61.111 0.00 0.00 40.11 3.91
2550 2649 2.288666 CGCTTTGCTTGGCTAGGATTA 58.711 47.619 0.00 0.00 0.00 1.75
2556 2655 1.473434 GCTTGGCTAGGATTACTGCGT 60.473 52.381 0.00 0.00 0.00 5.24
2557 2656 2.205074 CTTGGCTAGGATTACTGCGTG 58.795 52.381 0.00 0.00 0.00 5.34
2612 2711 2.099638 GGCGTCGGGCGAAAATTC 59.900 61.111 6.02 0.00 44.92 2.17
2613 2712 2.682876 GGCGTCGGGCGAAAATTCA 61.683 57.895 6.02 0.00 44.92 2.57
2614 2713 1.427819 GCGTCGGGCGAAAATTCAT 59.572 52.632 6.02 0.00 44.77 2.57
2615 2714 0.588980 GCGTCGGGCGAAAATTCATC 60.589 55.000 6.02 0.00 44.77 2.92
2616 2715 0.724549 CGTCGGGCGAAAATTCATCA 59.275 50.000 0.00 0.00 44.77 3.07
2618 2717 2.223249 CGTCGGGCGAAAATTCATCAAT 60.223 45.455 0.00 0.00 44.77 2.57
2619 2718 3.001838 CGTCGGGCGAAAATTCATCAATA 59.998 43.478 0.00 0.00 44.77 1.90
2620 2719 4.495019 CGTCGGGCGAAAATTCATCAATAA 60.495 41.667 0.00 0.00 44.77 1.40
2621 2720 4.970003 GTCGGGCGAAAATTCATCAATAAG 59.030 41.667 0.00 0.00 0.00 1.73
2622 2721 4.638421 TCGGGCGAAAATTCATCAATAAGT 59.362 37.500 0.00 0.00 0.00 2.24
2623 2722 4.734854 CGGGCGAAAATTCATCAATAAGTG 59.265 41.667 0.00 0.00 0.00 3.16
2626 2725 7.519809 CGGGCGAAAATTCATCAATAAGTGATA 60.520 37.037 0.00 0.00 45.69 2.15
2627 2726 7.805071 GGGCGAAAATTCATCAATAAGTGATAG 59.195 37.037 0.00 0.00 45.69 2.08
2628 2727 8.345565 GGCGAAAATTCATCAATAAGTGATAGT 58.654 33.333 0.00 0.00 45.69 2.12
2635 2734 9.988815 ATTCATCAATAAGTGATAGTACTCCAC 57.011 33.333 16.34 16.34 45.69 4.02
2668 2767 1.433879 GCTAGCGACGAGGACACAT 59.566 57.895 0.00 0.00 0.00 3.21
2751 2852 1.686115 GCAGGTGGCTATGGAATGGTT 60.686 52.381 0.00 0.00 40.25 3.67
2794 2908 4.351111 GGAAAATTCCTCTCCCCATAGCTA 59.649 45.833 4.91 0.00 44.11 3.32
2880 3034 3.443925 GCGCTTTTCCCCTGCTCC 61.444 66.667 0.00 0.00 0.00 4.70
2882 3036 2.363018 GCTTTTCCCCTGCTCCCC 60.363 66.667 0.00 0.00 0.00 4.81
2887 3041 3.642741 TTCCCCTGCTCCCCCTCTC 62.643 68.421 0.00 0.00 0.00 3.20
2889 3043 2.445654 CCCTGCTCCCCCTCTCTC 60.446 72.222 0.00 0.00 0.00 3.20
2890 3044 2.695597 CCTGCTCCCCCTCTCTCT 59.304 66.667 0.00 0.00 0.00 3.10
2891 3045 1.002792 CCTGCTCCCCCTCTCTCTT 59.997 63.158 0.00 0.00 0.00 2.85
2934 3092 9.136952 CTTTGATCCTCATTTGTTTTCTTGATC 57.863 33.333 0.00 0.00 0.00 2.92
2941 3100 7.115947 CCTCATTTGTTTTCTTGATCTTTCTGC 59.884 37.037 0.00 0.00 0.00 4.26
2962 3121 3.245797 CTTCGTCATCGCTTTTCTCTGA 58.754 45.455 0.00 0.00 36.96 3.27
2963 3122 3.510388 TCGTCATCGCTTTTCTCTGAT 57.490 42.857 0.00 0.00 36.96 2.90
2964 3123 3.182182 TCGTCATCGCTTTTCTCTGATG 58.818 45.455 0.00 0.00 39.59 3.07
3091 3496 3.763360 ACATTCCGATCCAGAAATGCAAA 59.237 39.130 0.00 0.00 0.00 3.68
3126 3531 4.891756 AGGGCACATTGAATAGAATGGAAG 59.108 41.667 0.00 0.00 37.60 3.46
3130 3535 5.532406 GCACATTGAATAGAATGGAAGGCTA 59.468 40.000 0.00 0.00 37.60 3.93
3236 3679 1.281899 CGGTGCTACTTGCTTCTAGC 58.718 55.000 0.00 0.00 43.37 3.42
3471 4319 9.265901 GTTTATGTTCATACTGCATCTCATACT 57.734 33.333 0.00 0.00 0.00 2.12
3537 4407 1.087202 TGTGGTGTGAGTTGTCGTGC 61.087 55.000 0.00 0.00 0.00 5.34
3641 4519 3.813529 GCGTTTAGCTGATGAACAAGT 57.186 42.857 0.00 0.00 44.04 3.16
3687 4565 2.769621 TGCTCGGGCTCCATGGAT 60.770 61.111 16.63 0.00 39.59 3.41
3742 4621 5.934043 GGTTTCAATCTTCCAAAATTCTGGG 59.066 40.000 0.00 0.00 37.06 4.45
3768 4649 6.656314 AAAAATCAACAGTATCATACGCGA 57.344 33.333 15.93 0.00 0.00 5.87
3769 4650 6.656314 AAAATCAACAGTATCATACGCGAA 57.344 33.333 15.93 0.00 0.00 4.70
3770 4651 6.656314 AAATCAACAGTATCATACGCGAAA 57.344 33.333 15.93 0.00 0.00 3.46
3771 4652 6.844696 AATCAACAGTATCATACGCGAAAT 57.155 33.333 15.93 2.32 0.00 2.17
3772 4653 6.844696 ATCAACAGTATCATACGCGAAATT 57.155 33.333 15.93 0.00 0.00 1.82
3773 4654 6.031549 TCAACAGTATCATACGCGAAATTG 57.968 37.500 15.93 4.45 0.00 2.32
3774 4655 5.808030 TCAACAGTATCATACGCGAAATTGA 59.192 36.000 15.93 10.30 0.00 2.57
3775 4656 6.478673 TCAACAGTATCATACGCGAAATTGAT 59.521 34.615 15.93 16.66 33.59 2.57
3776 4657 6.215477 ACAGTATCATACGCGAAATTGATG 57.785 37.500 15.93 7.81 31.59 3.07
3777 4658 5.753438 ACAGTATCATACGCGAAATTGATGT 59.247 36.000 15.93 8.41 31.59 3.06
3778 4659 6.067039 CAGTATCATACGCGAAATTGATGTG 58.933 40.000 15.93 12.43 31.59 3.21
3779 4660 3.317744 TCATACGCGAAATTGATGTGC 57.682 42.857 15.93 0.00 0.00 4.57
3780 4661 2.675348 TCATACGCGAAATTGATGTGCA 59.325 40.909 15.93 0.00 0.00 4.57
3781 4662 2.519002 TACGCGAAATTGATGTGCAC 57.481 45.000 15.93 10.75 0.00 4.57
3782 4663 0.590682 ACGCGAAATTGATGTGCACA 59.409 45.000 24.08 24.08 0.00 4.57
3783 4664 0.976963 CGCGAAATTGATGTGCACAC 59.023 50.000 24.37 16.37 0.00 3.82
3784 4665 0.976963 GCGAAATTGATGTGCACACG 59.023 50.000 24.37 19.71 0.00 4.49
3785 4666 1.399599 GCGAAATTGATGTGCACACGA 60.400 47.619 24.37 15.90 0.00 4.35
3786 4667 2.233355 CGAAATTGATGTGCACACGAC 58.767 47.619 24.37 16.70 0.00 4.34
3787 4668 2.349343 CGAAATTGATGTGCACACGACA 60.349 45.455 24.37 19.11 0.00 4.35
3788 4669 3.667695 CGAAATTGATGTGCACACGACAT 60.668 43.478 24.37 5.44 36.73 3.06
3789 4670 2.905959 ATTGATGTGCACACGACATG 57.094 45.000 24.37 0.00 34.10 3.21
3790 4671 0.238025 TTGATGTGCACACGACATGC 59.762 50.000 24.37 6.31 43.68 4.06
3806 4687 2.937591 CATGCAATGCCCGATGTTATC 58.062 47.619 1.53 0.00 37.62 1.75
3807 4688 2.049888 TGCAATGCCCGATGTTATCA 57.950 45.000 1.53 0.00 0.00 2.15
3808 4689 2.585330 TGCAATGCCCGATGTTATCAT 58.415 42.857 1.53 0.00 36.95 2.45
3809 4690 3.749226 TGCAATGCCCGATGTTATCATA 58.251 40.909 1.53 0.00 34.06 2.15
3810 4691 3.501828 TGCAATGCCCGATGTTATCATAC 59.498 43.478 1.53 0.00 34.06 2.39
3811 4692 3.424829 GCAATGCCCGATGTTATCATACG 60.425 47.826 0.00 0.00 34.06 3.06
3819 4700 3.910170 CGATGTTATCATACGGGTGTACG 59.090 47.826 0.00 0.00 35.65 3.67
3853 4734 5.416862 AAAAATTTCATGACCAAAACGCC 57.583 34.783 0.00 0.00 0.00 5.68
4019 4900 1.400494 GTGGTTGCACGTTATCCATCC 59.600 52.381 0.00 0.00 0.00 3.51
4069 5011 8.356657 ACATACTCTATATTGACTGCTGAGTTC 58.643 37.037 0.00 0.00 35.36 3.01
4091 5033 3.970610 CAGAATCGCAGTTGTCAAAGTTG 59.029 43.478 0.00 0.00 0.00 3.16
4092 5034 3.876914 AGAATCGCAGTTGTCAAAGTTGA 59.123 39.130 0.00 0.00 34.20 3.18
4129 5071 3.685139 TTTGACTAAGCTGAGGTCCTG 57.315 47.619 2.29 0.00 0.00 3.86
4244 5187 0.806868 ATGACACAATCGGCAGCTTG 59.193 50.000 0.00 0.00 0.00 4.01
4269 7039 4.341502 CCCCTGCGGCAAACAACG 62.342 66.667 3.44 0.00 0.00 4.10
4305 7075 1.152398 GCTGGCCATTGATCCCCAT 60.152 57.895 5.51 0.00 0.00 4.00
4315 7085 5.456763 GCCATTGATCCCCATTAGAGTACTT 60.457 44.000 0.00 0.00 0.00 2.24
4316 7086 6.000219 CCATTGATCCCCATTAGAGTACTTG 59.000 44.000 0.00 0.00 0.00 3.16
4317 7087 4.689612 TGATCCCCATTAGAGTACTTGC 57.310 45.455 0.00 0.00 0.00 4.01
4318 7088 3.391296 TGATCCCCATTAGAGTACTTGCC 59.609 47.826 0.00 0.00 0.00 4.52
4320 7090 3.460825 TCCCCATTAGAGTACTTGCCTT 58.539 45.455 0.00 0.00 0.00 4.35
4322 7092 3.433740 CCCCATTAGAGTACTTGCCTTCC 60.434 52.174 0.00 0.00 0.00 3.46
4324 7094 3.456277 CCATTAGAGTACTTGCCTTCCCT 59.544 47.826 0.00 0.00 0.00 4.20
4325 7095 4.443598 CCATTAGAGTACTTGCCTTCCCTC 60.444 50.000 0.00 0.00 0.00 4.30
4326 7096 2.327325 AGAGTACTTGCCTTCCCTCA 57.673 50.000 0.00 0.00 0.00 3.86
4327 7097 2.621070 AGAGTACTTGCCTTCCCTCAA 58.379 47.619 0.00 0.00 0.00 3.02
4328 7098 2.979678 AGAGTACTTGCCTTCCCTCAAA 59.020 45.455 0.00 0.00 0.00 2.69
4329 7099 3.394606 AGAGTACTTGCCTTCCCTCAAAA 59.605 43.478 0.00 0.00 0.00 2.44
4330 7100 4.141251 AGAGTACTTGCCTTCCCTCAAAAA 60.141 41.667 0.00 0.00 0.00 1.94
4427 7275 0.514691 CGTGCTTCCTTGCTCTGTTC 59.485 55.000 0.00 0.00 0.00 3.18
4781 7630 8.418662 TGTATATTGATGGTAGTTGGTAGTGTC 58.581 37.037 0.00 0.00 0.00 3.67
4829 7695 3.999663 AGCTTGTCTTCTGCAAGTATGAC 59.000 43.478 6.86 0.00 43.65 3.06
4838 7704 1.548719 TGCAAGTATGACTACCAGCGT 59.451 47.619 0.00 0.00 33.27 5.07
4892 7764 4.661222 TGAAGGTCTGCCATGAACAATTA 58.339 39.130 0.00 0.00 37.19 1.40
4925 7798 2.238646 TCTTCCGGAAAGTGGCATGTAT 59.761 45.455 19.39 0.00 36.31 2.29
4940 7813 8.361139 AGTGGCATGTATTAGTCTAGAATGTAC 58.639 37.037 2.23 6.77 0.00 2.90
4970 7843 1.658994 CGCTTATTTAGTGGCCGGAA 58.341 50.000 5.05 0.00 0.00 4.30
5056 7948 1.479730 ACTTAACCTACTACGGCAGCC 59.520 52.381 0.00 0.00 0.00 4.85
5094 7986 2.627221 TGTGGTTGTTGATGTCCAATGG 59.373 45.455 0.00 0.00 37.08 3.16
5182 8112 1.981256 ATTGTGTGTGACCAACCTCC 58.019 50.000 0.00 0.00 0.00 4.30
5187 8117 4.717313 GTGACCAACCTCCGCCCC 62.717 72.222 0.00 0.00 0.00 5.80
5362 8503 7.323656 GTCAATATTCGTTTTGGTTCTTCACTG 59.676 37.037 0.00 0.00 0.00 3.66
5371 8512 7.586300 CGTTTTGGTTCTTCACTGTGTTTATAG 59.414 37.037 7.79 0.01 0.00 1.31
5434 8583 5.824904 AACACCATGAAATGCTGATAGTC 57.175 39.130 0.00 0.00 44.97 2.59
5479 8628 1.462616 TGCGATTTTGCTAGTGCCAT 58.537 45.000 0.00 0.00 38.71 4.40
5514 8733 0.037512 CACCGGGAAATTTGCATGCA 60.038 50.000 18.46 18.46 0.00 3.96
5991 9218 2.060383 CGAGGAGGAGATGGTGGCA 61.060 63.158 0.00 0.00 0.00 4.92
6185 9415 1.226491 CGACGCCGTAATTCCGTCT 60.226 57.895 10.13 0.00 46.49 4.18
6223 9454 5.152623 TGCATAGATAATAGTGTCCTGGC 57.847 43.478 0.00 0.00 0.00 4.85
6228 9459 0.750850 TAATAGTGTCCTGGCGCCTC 59.249 55.000 29.70 15.44 0.00 4.70
6247 9478 3.629398 CCTCTATGTCATGTTCTTTGCCC 59.371 47.826 0.00 0.00 0.00 5.36
6335 9802 0.318120 GGTAAACAACCGACCGGAGA 59.682 55.000 16.07 0.00 38.88 3.71
6350 9819 1.212229 GAGAAGGGACGACGGTGAC 59.788 63.158 0.00 0.00 0.00 3.67
6471 9940 5.607477 TCCCGTTTGTGATTGATATACTCC 58.393 41.667 0.00 0.00 0.00 3.85
6472 9941 4.755123 CCCGTTTGTGATTGATATACTCCC 59.245 45.833 0.00 0.00 0.00 4.30
6473 9942 5.364778 CCGTTTGTGATTGATATACTCCCA 58.635 41.667 0.00 0.00 0.00 4.37
6474 9943 5.997746 CCGTTTGTGATTGATATACTCCCAT 59.002 40.000 0.00 0.00 0.00 4.00
6498 9971 4.141367 CCTGGACTCTGGAGTGAGTAGATA 60.141 50.000 8.06 0.00 46.11 1.98
6677 10152 6.527423 ACATTGCCTTCACATGATTTCTTTT 58.473 32.000 0.00 0.00 0.00 2.27
6716 10191 0.105039 ATGGCCGTAGCTAAGAGCAC 59.895 55.000 8.37 5.35 45.56 4.40
6720 10195 1.269154 GCCGTAGCTAAGAGCACCTAC 60.269 57.143 8.37 0.00 45.56 3.18
6721 10196 2.022195 CCGTAGCTAAGAGCACCTACA 58.978 52.381 8.37 0.00 45.56 2.74
6722 10197 2.426024 CCGTAGCTAAGAGCACCTACAA 59.574 50.000 8.37 0.00 45.56 2.41
6723 10198 3.436496 CGTAGCTAAGAGCACCTACAAC 58.564 50.000 0.00 0.00 45.56 3.32
6724 10199 3.734293 CGTAGCTAAGAGCACCTACAACC 60.734 52.174 0.00 0.00 45.56 3.77
6725 10200 1.204941 AGCTAAGAGCACCTACAACCG 59.795 52.381 0.64 0.00 45.56 4.44
6726 10201 1.739371 GCTAAGAGCACCTACAACCGG 60.739 57.143 0.00 0.00 41.89 5.28
6727 10202 1.822990 CTAAGAGCACCTACAACCGGA 59.177 52.381 9.46 0.00 0.00 5.14
6728 10203 0.608640 AAGAGCACCTACAACCGGAG 59.391 55.000 9.46 1.96 0.00 4.63
6729 10204 1.448013 GAGCACCTACAACCGGAGC 60.448 63.158 9.46 0.00 38.25 4.70
6730 10205 1.913762 AGCACCTACAACCGGAGCT 60.914 57.895 9.46 0.83 42.47 4.09
6731 10206 1.448013 GCACCTACAACCGGAGCTC 60.448 63.158 9.46 4.71 35.59 4.09
6732 10207 1.218316 CACCTACAACCGGAGCTCC 59.782 63.158 23.79 23.79 0.00 4.70
6733 10208 1.229082 ACCTACAACCGGAGCTCCA 60.229 57.895 31.67 10.79 35.14 3.86
6734 10209 0.617820 ACCTACAACCGGAGCTCCAT 60.618 55.000 31.67 16.95 35.14 3.41
6735 10210 1.342674 ACCTACAACCGGAGCTCCATA 60.343 52.381 31.67 14.08 35.14 2.74
6736 10211 1.971357 CCTACAACCGGAGCTCCATAT 59.029 52.381 31.67 13.86 35.14 1.78
6737 10212 2.028930 CCTACAACCGGAGCTCCATATC 60.029 54.545 31.67 5.16 35.14 1.63
6738 10213 0.759346 ACAACCGGAGCTCCATATCC 59.241 55.000 31.67 5.38 35.14 2.59
6742 10217 2.665603 GGAGCTCCATATCCGCCC 59.334 66.667 28.43 0.00 35.64 6.13
6743 10218 2.665603 GAGCTCCATATCCGCCCC 59.334 66.667 0.87 0.00 0.00 5.80
6744 10219 2.122413 AGCTCCATATCCGCCCCA 60.122 61.111 0.00 0.00 0.00 4.96
6745 10220 1.768684 GAGCTCCATATCCGCCCCAA 61.769 60.000 0.87 0.00 0.00 4.12
6746 10221 1.150536 GCTCCATATCCGCCCCAAA 59.849 57.895 0.00 0.00 0.00 3.28
6747 10222 1.172812 GCTCCATATCCGCCCCAAAC 61.173 60.000 0.00 0.00 0.00 2.93
6748 10223 0.182537 CTCCATATCCGCCCCAAACA 59.817 55.000 0.00 0.00 0.00 2.83
6749 10224 0.850100 TCCATATCCGCCCCAAACAT 59.150 50.000 0.00 0.00 0.00 2.71
6750 10225 1.202879 TCCATATCCGCCCCAAACATC 60.203 52.381 0.00 0.00 0.00 3.06
6751 10226 1.247567 CATATCCGCCCCAAACATCC 58.752 55.000 0.00 0.00 0.00 3.51
6752 10227 0.250727 ATATCCGCCCCAAACATCCG 60.251 55.000 0.00 0.00 0.00 4.18
6753 10228 2.332312 TATCCGCCCCAAACATCCGG 62.332 60.000 0.00 0.00 40.25 5.14
6756 10231 4.759205 GCCCCAAACATCCGGCCT 62.759 66.667 0.00 0.00 35.23 5.19
6757 10232 3.003230 CCCCAAACATCCGGCCTA 58.997 61.111 0.00 0.00 0.00 3.93
6758 10233 1.453197 CCCCAAACATCCGGCCTAC 60.453 63.158 0.00 0.00 0.00 3.18
6759 10234 1.453197 CCCAAACATCCGGCCTACC 60.453 63.158 0.00 0.00 0.00 3.18
6760 10235 1.453197 CCAAACATCCGGCCTACCC 60.453 63.158 0.00 0.00 0.00 3.69
6769 10244 2.995547 GGCCTACCCGGTCATTGT 59.004 61.111 0.00 0.00 37.34 2.71
6770 10245 1.301954 GGCCTACCCGGTCATTGTT 59.698 57.895 0.00 0.00 37.34 2.83
6771 10246 0.746923 GGCCTACCCGGTCATTGTTC 60.747 60.000 0.00 0.00 37.34 3.18
6772 10247 0.252197 GCCTACCCGGTCATTGTTCT 59.748 55.000 0.00 0.00 34.25 3.01
6773 10248 2.012051 GCCTACCCGGTCATTGTTCTG 61.012 57.143 0.00 0.00 34.25 3.02
6774 10249 1.553248 CCTACCCGGTCATTGTTCTGA 59.447 52.381 0.00 0.00 0.00 3.27
6775 10250 2.618053 CTACCCGGTCATTGTTCTGAC 58.382 52.381 0.00 0.00 43.90 3.51
6781 10256 2.969443 GTCATTGTTCTGACCAACCG 57.031 50.000 0.00 0.00 39.72 4.44
6782 10257 2.489971 GTCATTGTTCTGACCAACCGA 58.510 47.619 0.00 0.00 39.72 4.69
6783 10258 2.875933 GTCATTGTTCTGACCAACCGAA 59.124 45.455 0.00 0.00 39.72 4.30
6784 10259 3.502211 GTCATTGTTCTGACCAACCGAAT 59.498 43.478 0.00 0.00 39.72 3.34
6785 10260 3.751175 TCATTGTTCTGACCAACCGAATC 59.249 43.478 0.00 0.00 0.00 2.52
6786 10261 3.485463 TTGTTCTGACCAACCGAATCT 57.515 42.857 0.00 0.00 0.00 2.40
6787 10262 2.766313 TGTTCTGACCAACCGAATCTG 58.234 47.619 0.00 0.00 0.00 2.90
6788 10263 2.076863 GTTCTGACCAACCGAATCTGG 58.923 52.381 0.00 0.00 38.77 3.86
6789 10264 0.036388 TCTGACCAACCGAATCTGGC 60.036 55.000 0.00 0.00 36.03 4.85
6790 10265 0.321564 CTGACCAACCGAATCTGGCA 60.322 55.000 0.00 0.00 36.03 4.92
6791 10266 0.109532 TGACCAACCGAATCTGGCAA 59.890 50.000 0.00 0.00 36.03 4.52
6792 10267 1.243902 GACCAACCGAATCTGGCAAA 58.756 50.000 0.00 0.00 36.03 3.68
6793 10268 1.818674 GACCAACCGAATCTGGCAAAT 59.181 47.619 0.00 0.00 36.03 2.32
6794 10269 1.545582 ACCAACCGAATCTGGCAAATG 59.454 47.619 0.00 0.00 36.03 2.32
6795 10270 1.632422 CAACCGAATCTGGCAAATGC 58.368 50.000 0.00 0.00 41.14 3.56
6796 10271 1.067706 CAACCGAATCTGGCAAATGCA 60.068 47.619 7.80 0.00 44.36 3.96
6797 10272 0.813184 ACCGAATCTGGCAAATGCAG 59.187 50.000 7.80 3.47 44.36 4.41
6798 10273 0.813184 CCGAATCTGGCAAATGCAGT 59.187 50.000 7.80 0.00 44.36 4.40
6799 10274 1.202222 CCGAATCTGGCAAATGCAGTC 60.202 52.381 7.80 0.00 44.36 3.51
6800 10275 1.202222 CGAATCTGGCAAATGCAGTCC 60.202 52.381 7.80 0.00 44.36 3.85
6801 10276 1.820519 GAATCTGGCAAATGCAGTCCA 59.179 47.619 7.80 0.00 44.36 4.02
6802 10277 1.927487 ATCTGGCAAATGCAGTCCAA 58.073 45.000 7.80 0.00 44.36 3.53
6803 10278 1.702182 TCTGGCAAATGCAGTCCAAA 58.298 45.000 7.80 0.00 44.36 3.28
6804 10279 1.340889 TCTGGCAAATGCAGTCCAAAC 59.659 47.619 7.80 0.00 44.36 2.93
6805 10280 0.031857 TGGCAAATGCAGTCCAAACG 59.968 50.000 7.80 0.00 44.36 3.60
6806 10281 0.031994 GGCAAATGCAGTCCAAACGT 59.968 50.000 7.80 0.00 44.36 3.99
6807 10282 1.537990 GGCAAATGCAGTCCAAACGTT 60.538 47.619 7.80 0.00 44.36 3.99
6808 10283 2.200899 GCAAATGCAGTCCAAACGTTT 58.799 42.857 7.96 7.96 41.59 3.60
6809 10284 2.033832 GCAAATGCAGTCCAAACGTTTG 60.034 45.455 29.80 29.80 41.59 2.93
6810 10285 3.443037 CAAATGCAGTCCAAACGTTTGA 58.557 40.909 36.20 21.76 40.55 2.69
6811 10286 4.050553 CAAATGCAGTCCAAACGTTTGAT 58.949 39.130 36.20 20.54 40.55 2.57
6812 10287 4.320608 AATGCAGTCCAAACGTTTGATT 57.679 36.364 36.20 24.33 40.55 2.57
6813 10288 3.791973 TGCAGTCCAAACGTTTGATTT 57.208 38.095 36.20 20.21 40.55 2.17
6814 10289 4.116747 TGCAGTCCAAACGTTTGATTTT 57.883 36.364 36.20 18.64 40.55 1.82
6815 10290 4.499183 TGCAGTCCAAACGTTTGATTTTT 58.501 34.783 36.20 17.10 40.55 1.94
6832 10307 3.916359 TTTTTGTCCAAAAGAACCCCC 57.084 42.857 5.45 0.00 40.83 5.40
6833 10308 2.858787 TTTGTCCAAAAGAACCCCCT 57.141 45.000 0.00 0.00 0.00 4.79
6834 10309 2.080654 TTGTCCAAAAGAACCCCCTG 57.919 50.000 0.00 0.00 0.00 4.45
6835 10310 0.469144 TGTCCAAAAGAACCCCCTGC 60.469 55.000 0.00 0.00 0.00 4.85
6836 10311 1.155155 TCCAAAAGAACCCCCTGCC 59.845 57.895 0.00 0.00 0.00 4.85
6837 10312 2.275380 CCAAAAGAACCCCCTGCCG 61.275 63.158 0.00 0.00 0.00 5.69
6838 10313 1.228429 CAAAAGAACCCCCTGCCGA 60.228 57.895 0.00 0.00 0.00 5.54
6839 10314 0.825840 CAAAAGAACCCCCTGCCGAA 60.826 55.000 0.00 0.00 0.00 4.30
6840 10315 0.826256 AAAAGAACCCCCTGCCGAAC 60.826 55.000 0.00 0.00 0.00 3.95
6841 10316 3.546714 AAGAACCCCCTGCCGAACG 62.547 63.158 0.00 0.00 0.00 3.95
6845 10320 3.861797 CCCCCTGCCGAACGCTAT 61.862 66.667 0.00 0.00 38.78 2.97
6846 10321 2.189521 CCCCTGCCGAACGCTATT 59.810 61.111 0.00 0.00 38.78 1.73
6847 10322 2.180204 CCCCTGCCGAACGCTATTG 61.180 63.158 0.00 0.00 38.78 1.90
6848 10323 1.449601 CCCTGCCGAACGCTATTGT 60.450 57.895 0.00 0.00 38.78 2.71
6849 10324 1.429148 CCCTGCCGAACGCTATTGTC 61.429 60.000 0.00 0.00 38.78 3.18
6850 10325 0.739462 CCTGCCGAACGCTATTGTCA 60.739 55.000 0.00 0.00 38.78 3.58
6851 10326 1.075542 CTGCCGAACGCTATTGTCAA 58.924 50.000 0.00 0.00 38.78 3.18
6852 10327 1.463056 CTGCCGAACGCTATTGTCAAA 59.537 47.619 0.00 0.00 38.78 2.69
6853 10328 1.463056 TGCCGAACGCTATTGTCAAAG 59.537 47.619 0.00 0.00 38.78 2.77
6854 10329 1.202031 GCCGAACGCTATTGTCAAAGG 60.202 52.381 0.00 0.00 0.00 3.11
6855 10330 2.343101 CCGAACGCTATTGTCAAAGGA 58.657 47.619 0.00 0.00 0.00 3.36
6856 10331 2.093783 CCGAACGCTATTGTCAAAGGAC 59.906 50.000 0.00 0.00 44.57 3.85
6857 10332 2.993899 CGAACGCTATTGTCAAAGGACT 59.006 45.455 0.00 0.00 44.61 3.85
6858 10333 4.171005 CGAACGCTATTGTCAAAGGACTA 58.829 43.478 0.00 0.00 44.61 2.59
6859 10334 4.804139 CGAACGCTATTGTCAAAGGACTAT 59.196 41.667 0.00 0.00 44.61 2.12
6860 10335 5.051641 CGAACGCTATTGTCAAAGGACTATC 60.052 44.000 0.00 0.00 44.61 2.08
6861 10336 5.599999 ACGCTATTGTCAAAGGACTATCT 57.400 39.130 0.00 0.00 44.61 1.98
6862 10337 5.352284 ACGCTATTGTCAAAGGACTATCTG 58.648 41.667 0.00 0.00 44.61 2.90
6863 10338 4.210120 CGCTATTGTCAAAGGACTATCTGC 59.790 45.833 0.00 0.00 44.61 4.26
6864 10339 5.118990 GCTATTGTCAAAGGACTATCTGCA 58.881 41.667 0.00 0.00 44.61 4.41
6865 10340 5.236047 GCTATTGTCAAAGGACTATCTGCAG 59.764 44.000 7.63 7.63 44.61 4.41
6866 10341 4.890158 TTGTCAAAGGACTATCTGCAGA 57.110 40.909 20.79 20.79 44.61 4.26
6867 10342 5.426689 TTGTCAAAGGACTATCTGCAGAT 57.573 39.130 30.85 30.85 44.61 2.90
6868 10343 6.544928 TTGTCAAAGGACTATCTGCAGATA 57.455 37.500 29.86 29.86 44.61 1.98
6869 10344 6.544928 TGTCAAAGGACTATCTGCAGATAA 57.455 37.500 30.96 17.98 44.61 1.75
6870 10345 6.946340 TGTCAAAGGACTATCTGCAGATAAA 58.054 36.000 30.96 16.72 44.61 1.40
6871 10346 7.394016 TGTCAAAGGACTATCTGCAGATAAAA 58.606 34.615 30.96 16.05 44.61 1.52
6872 10347 7.882791 TGTCAAAGGACTATCTGCAGATAAAAA 59.117 33.333 30.96 15.71 44.61 1.94
6873 10348 8.178313 GTCAAAGGACTATCTGCAGATAAAAAC 58.822 37.037 30.96 21.95 40.99 2.43
6874 10349 6.910536 AAGGACTATCTGCAGATAAAAACG 57.089 37.500 30.96 22.61 36.66 3.60
6875 10350 5.978814 AGGACTATCTGCAGATAAAAACGT 58.021 37.500 30.96 25.13 36.66 3.99
6876 10351 6.043411 AGGACTATCTGCAGATAAAAACGTC 58.957 40.000 30.96 29.46 36.66 4.34
6877 10352 5.810587 GGACTATCTGCAGATAAAAACGTCA 59.189 40.000 32.53 17.39 36.66 4.35
6878 10353 6.312918 GGACTATCTGCAGATAAAAACGTCAA 59.687 38.462 32.53 16.85 36.66 3.18
6879 10354 7.148474 GGACTATCTGCAGATAAAAACGTCAAA 60.148 37.037 32.53 16.47 36.66 2.69
6880 10355 8.094798 ACTATCTGCAGATAAAAACGTCAAAA 57.905 30.769 30.96 11.41 36.66 2.44
6881 10356 8.564574 ACTATCTGCAGATAAAAACGTCAAAAA 58.435 29.630 30.96 11.02 36.66 1.94
6882 10357 7.858052 ATCTGCAGATAAAAACGTCAAAAAG 57.142 32.000 27.73 0.00 32.01 2.27
6883 10358 6.205784 TCTGCAGATAAAAACGTCAAAAAGG 58.794 36.000 13.74 0.00 0.00 3.11
6884 10359 6.038825 TCTGCAGATAAAAACGTCAAAAAGGA 59.961 34.615 13.74 0.00 0.00 3.36
6885 10360 5.974751 TGCAGATAAAAACGTCAAAAAGGAC 59.025 36.000 0.00 0.00 34.42 3.85
6886 10361 5.401376 GCAGATAAAAACGTCAAAAAGGACC 59.599 40.000 0.00 0.00 34.24 4.46
6887 10362 5.918576 CAGATAAAAACGTCAAAAAGGACCC 59.081 40.000 0.00 0.00 34.24 4.46
6888 10363 3.530265 AAAAACGTCAAAAAGGACCCC 57.470 42.857 0.00 0.00 34.24 4.95
6889 10364 1.405872 AAACGTCAAAAAGGACCCCC 58.594 50.000 0.00 0.00 34.24 5.40
6891 10366 0.179001 ACGTCAAAAAGGACCCCCTG 60.179 55.000 0.00 0.00 43.48 4.45
6892 10367 0.109723 CGTCAAAAAGGACCCCCTGA 59.890 55.000 0.00 0.00 43.48 3.86
6893 10368 1.617322 GTCAAAAAGGACCCCCTGAC 58.383 55.000 0.00 0.00 43.48 3.51
6894 10369 1.133606 GTCAAAAAGGACCCCCTGACA 60.134 52.381 8.14 0.00 43.48 3.58
6895 10370 1.571457 TCAAAAAGGACCCCCTGACAA 59.429 47.619 0.00 0.00 43.48 3.18
6896 10371 1.963515 CAAAAAGGACCCCCTGACAAG 59.036 52.381 0.00 0.00 43.48 3.16
6897 10372 1.231963 AAAAGGACCCCCTGACAAGT 58.768 50.000 0.00 0.00 43.48 3.16
6898 10373 0.478507 AAAGGACCCCCTGACAAGTG 59.521 55.000 0.00 0.00 43.48 3.16
6899 10374 1.427072 AAGGACCCCCTGACAAGTGG 61.427 60.000 0.00 0.00 43.48 4.00
6900 10375 2.034221 GACCCCCTGACAAGTGGC 59.966 66.667 0.00 0.00 0.00 5.01
6901 10376 3.901797 GACCCCCTGACAAGTGGCG 62.902 68.421 0.00 0.00 0.00 5.69
6902 10377 4.722700 CCCCCTGACAAGTGGCGG 62.723 72.222 0.00 0.00 0.00 6.13
6904 10379 4.641645 CCCTGACAAGTGGCGGCA 62.642 66.667 7.97 7.97 0.00 5.69
6905 10380 3.052082 CCTGACAAGTGGCGGCAG 61.052 66.667 13.91 2.93 0.00 4.85
6906 10381 3.052082 CTGACAAGTGGCGGCAGG 61.052 66.667 13.91 7.88 0.00 4.85
6907 10382 3.832237 CTGACAAGTGGCGGCAGGT 62.832 63.158 13.91 11.58 0.00 4.00
6908 10383 3.357079 GACAAGTGGCGGCAGGTG 61.357 66.667 13.91 16.12 0.00 4.00
6999 10474 3.722295 CGCGGTGCACAACGGATT 61.722 61.111 20.43 0.00 42.74 3.01
7000 10475 2.175811 GCGGTGCACAACGGATTC 59.824 61.111 20.43 0.00 42.74 2.52
7001 10476 2.474266 CGGTGCACAACGGATTCG 59.526 61.111 20.43 6.32 37.98 3.34
7002 10477 2.867472 GGTGCACAACGGATTCGG 59.133 61.111 20.43 0.00 41.39 4.30
7003 10478 2.175811 GTGCACAACGGATTCGGC 59.824 61.111 13.17 0.00 41.39 5.54
7004 10479 2.281139 TGCACAACGGATTCGGCA 60.281 55.556 0.00 0.00 41.39 5.69
7005 10480 1.673993 TGCACAACGGATTCGGCAT 60.674 52.632 0.00 0.00 41.39 4.40
7006 10481 0.391793 TGCACAACGGATTCGGCATA 60.392 50.000 0.00 0.00 41.39 3.14
7007 10482 0.304705 GCACAACGGATTCGGCATAG 59.695 55.000 0.00 0.00 41.39 2.23
7008 10483 1.651987 CACAACGGATTCGGCATAGT 58.348 50.000 0.00 0.00 41.39 2.12
7009 10484 1.327460 CACAACGGATTCGGCATAGTG 59.673 52.381 0.00 0.00 41.39 2.74
7010 10485 0.304705 CAACGGATTCGGCATAGTGC 59.695 55.000 0.00 0.00 44.08 4.40
7017 10492 2.080693 ATTCGGCATAGTGCAACGAAA 58.919 42.857 15.90 4.89 45.08 3.46
7018 10493 2.159572 ATTCGGCATAGTGCAACGAAAC 60.160 45.455 15.90 0.00 45.08 2.78
7019 10494 5.539155 ATTCGGCATAGTGCAACGAAACG 62.539 47.826 15.90 4.72 45.08 3.60
7020 10495 3.290098 GCATAGTGCAACGAAACGG 57.710 52.632 0.00 0.00 45.86 4.44
7021 10496 0.179200 GCATAGTGCAACGAAACGGG 60.179 55.000 0.00 0.00 45.86 5.28
7022 10497 1.153353 CATAGTGCAACGAAACGGGT 58.847 50.000 0.00 0.00 45.86 5.28
7023 10498 1.136085 CATAGTGCAACGAAACGGGTG 60.136 52.381 0.00 0.00 45.86 4.61
7024 10499 0.104487 TAGTGCAACGAAACGGGTGA 59.896 50.000 0.00 0.00 45.86 4.02
7025 10500 1.157870 AGTGCAACGAAACGGGTGAG 61.158 55.000 0.00 0.00 45.86 3.51
7026 10501 1.890041 TGCAACGAAACGGGTGAGG 60.890 57.895 0.00 0.00 0.00 3.86
7027 10502 2.943653 CAACGAAACGGGTGAGGC 59.056 61.111 0.00 0.00 0.00 4.70
7028 10503 2.281276 AACGAAACGGGTGAGGCC 60.281 61.111 0.00 0.00 0.00 5.19
7029 10504 3.109592 AACGAAACGGGTGAGGCCA 62.110 57.895 5.01 0.00 39.65 5.36
7030 10505 2.742372 CGAAACGGGTGAGGCCAG 60.742 66.667 5.01 0.00 39.65 4.85
7031 10506 2.359975 GAAACGGGTGAGGCCAGG 60.360 66.667 5.01 0.00 39.65 4.45
7032 10507 3.175710 AAACGGGTGAGGCCAGGT 61.176 61.111 5.01 0.00 39.65 4.00
7033 10508 3.491598 AAACGGGTGAGGCCAGGTG 62.492 63.158 5.01 0.00 39.65 4.00
7098 10573 4.790962 CCAGGCCGACAGCAGCAT 62.791 66.667 0.00 0.00 46.50 3.79
7099 10574 3.200593 CAGGCCGACAGCAGCATC 61.201 66.667 0.00 0.00 46.50 3.91
7100 10575 3.397439 AGGCCGACAGCAGCATCT 61.397 61.111 0.00 0.00 46.50 2.90
7101 10576 2.437359 GGCCGACAGCAGCATCTT 60.437 61.111 0.00 0.00 46.50 2.40
7102 10577 2.467826 GGCCGACAGCAGCATCTTC 61.468 63.158 0.00 0.00 46.50 2.87
7103 10578 1.742880 GCCGACAGCAGCATCTTCA 60.743 57.895 0.00 0.00 42.97 3.02
7104 10579 1.975363 GCCGACAGCAGCATCTTCAC 61.975 60.000 0.00 0.00 42.97 3.18
7105 10580 1.690283 CCGACAGCAGCATCTTCACG 61.690 60.000 0.00 0.00 0.00 4.35
7106 10581 1.690283 CGACAGCAGCATCTTCACGG 61.690 60.000 0.00 0.00 0.00 4.94
7107 10582 1.364626 GACAGCAGCATCTTCACGGG 61.365 60.000 0.00 0.00 0.00 5.28
7108 10583 1.078918 CAGCAGCATCTTCACGGGA 60.079 57.895 0.00 0.00 0.00 5.14
7109 10584 0.674581 CAGCAGCATCTTCACGGGAA 60.675 55.000 0.00 0.00 0.00 3.97
7116 10591 2.815647 CTTCACGGGAAGCGAGGC 60.816 66.667 15.71 0.00 43.67 4.70
7117 10592 4.735132 TTCACGGGAAGCGAGGCG 62.735 66.667 0.00 0.00 0.00 5.52
7168 10643 4.720902 CCCATGCGTGCACCAGGA 62.721 66.667 17.73 5.14 0.00 3.86
7169 10644 3.129502 CCATGCGTGCACCAGGAG 61.130 66.667 17.73 3.32 0.00 3.69
7170 10645 2.359107 CATGCGTGCACCAGGAGT 60.359 61.111 12.15 0.00 0.00 3.85
7171 10646 1.079197 CATGCGTGCACCAGGAGTA 60.079 57.895 12.15 0.00 0.00 2.59
7172 10647 1.079127 ATGCGTGCACCAGGAGTAC 60.079 57.895 12.15 0.00 0.00 2.73
7173 10648 2.809601 GCGTGCACCAGGAGTACG 60.810 66.667 20.52 20.52 45.74 3.67
7174 10649 2.649034 CGTGCACCAGGAGTACGT 59.351 61.111 17.40 0.00 39.66 3.57
7175 10650 1.733041 CGTGCACCAGGAGTACGTG 60.733 63.158 17.40 0.00 39.66 4.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.134128 ACATCATATGCAGCACCCGAA 60.134 47.619 0.00 0.00 0.00 4.30
12 13 3.999046 TGGACAGCTACATCATATGCAG 58.001 45.455 0.00 0.00 0.00 4.41
27 28 1.770658 TGGATAAGCCTGGATGGACAG 59.229 52.381 0.00 0.00 38.35 3.51
64 65 3.791353 CACGCAGAGGAAAAGAAAACAAC 59.209 43.478 0.00 0.00 0.00 3.32
71 72 0.319555 CGACCACGCAGAGGAAAAGA 60.320 55.000 0.00 0.00 42.26 2.52
82 83 1.631072 CATCATTCGACGACCACGC 59.369 57.895 0.00 0.00 43.96 5.34
91 92 2.304470 TCCAAACAGTCCCATCATTCGA 59.696 45.455 0.00 0.00 0.00 3.71
92 93 2.420022 GTCCAAACAGTCCCATCATTCG 59.580 50.000 0.00 0.00 0.00 3.34
93 94 2.420022 CGTCCAAACAGTCCCATCATTC 59.580 50.000 0.00 0.00 0.00 2.67
177 178 2.293955 TGTCGTCGACAGAATAACACCA 59.706 45.455 23.70 3.90 37.67 4.17
189 190 6.748198 AGATAGAAAGAAAGAATGTCGTCGAC 59.252 38.462 18.51 18.51 0.00 4.20
202 203 8.784043 GGCAGTGTTAAGAAAGATAGAAAGAAA 58.216 33.333 0.00 0.00 0.00 2.52
286 291 9.745880 ATGAGCTTGATCTTGCTTTATTAATTG 57.254 29.630 12.80 0.00 39.91 2.32
293 298 7.458409 AAAAGATGAGCTTGATCTTGCTTTA 57.542 32.000 17.98 7.37 39.58 1.85
332 337 1.496060 TACCTACATCCACAGCAGGG 58.504 55.000 0.00 0.00 0.00 4.45
374 380 2.535732 GCGCAGTTCAATTCGTCATCTC 60.536 50.000 0.30 0.00 0.00 2.75
396 403 1.734163 AAAAATGGGAGTAGGCGTCG 58.266 50.000 0.00 0.00 0.00 5.12
403 410 7.780745 TGTCTTTTCCAGTTAAAAATGGGAGTA 59.219 33.333 9.14 0.00 43.95 2.59
426 436 2.497675 TCTGTCCAGCCAAGAGTATGTC 59.502 50.000 0.00 0.00 0.00 3.06
427 437 2.499289 CTCTGTCCAGCCAAGAGTATGT 59.501 50.000 0.00 0.00 0.00 2.29
428 438 2.499289 ACTCTGTCCAGCCAAGAGTATG 59.501 50.000 2.82 0.00 37.98 2.39
430 440 1.895798 CACTCTGTCCAGCCAAGAGTA 59.104 52.381 4.37 0.00 37.71 2.59
448 458 2.552315 CACACACAGTTGGGGATAACAC 59.448 50.000 0.00 0.00 33.02 3.32
465 475 2.165301 GCCCGTCTGCGATACACAC 61.165 63.158 0.00 0.00 41.33 3.82
467 477 2.585247 GGCCCGTCTGCGATACAC 60.585 66.667 0.00 0.00 41.33 2.90
484 494 2.609459 GCACTTATGGATTGGTCGTCAG 59.391 50.000 0.00 0.00 0.00 3.51
526 536 2.918345 GCATTTGCAGCCGTGGTCA 61.918 57.895 0.00 0.00 41.59 4.02
591 601 2.556534 ACGAATATACGCGGGATAGC 57.443 50.000 12.47 3.79 36.70 2.97
599 609 8.278408 TGGATACGATAGAATACGAATATACGC 58.722 37.037 0.00 0.00 42.51 4.42
609 619 4.705507 TCCTGGCTGGATACGATAGAATAC 59.294 45.833 9.30 0.00 40.56 1.89
628 638 0.245539 ATGTCGTACCACGGTTCCTG 59.754 55.000 0.00 0.00 42.81 3.86
668 678 4.864334 CTAGCTTGGCTGGCCGGG 62.864 72.222 15.02 1.86 40.10 5.73
783 816 2.740055 GAGACGCACTGCCACTGG 60.740 66.667 0.00 0.00 0.00 4.00
784 817 1.735920 GAGAGACGCACTGCCACTG 60.736 63.158 0.00 0.00 0.00 3.66
827 860 4.773117 GACTGACGGACCGGCGAC 62.773 72.222 20.00 8.48 37.93 5.19
833 866 1.301479 GGTTGGTGACTGACGGACC 60.301 63.158 0.00 0.00 0.00 4.46
851 884 4.692475 GGTGGACGGACGGGTTGG 62.692 72.222 0.00 0.00 0.00 3.77
947 980 2.125188 GCAGAGCAGAGGTGGAGC 60.125 66.667 0.00 0.00 0.00 4.70
948 981 1.516892 GAGCAGAGCAGAGGTGGAG 59.483 63.158 0.00 0.00 0.00 3.86
949 982 1.986757 GGAGCAGAGCAGAGGTGGA 60.987 63.158 0.00 0.00 0.00 4.02
951 984 2.583520 GGGAGCAGAGCAGAGGTG 59.416 66.667 0.00 0.00 0.00 4.00
952 985 2.686835 GGGGAGCAGAGCAGAGGT 60.687 66.667 0.00 0.00 0.00 3.85
953 986 1.633915 ATTGGGGAGCAGAGCAGAGG 61.634 60.000 0.00 0.00 0.00 3.69
1320 1386 1.133482 TGGAGCAGATCGTCAGGGATA 60.133 52.381 0.00 0.00 0.00 2.59
1326 1392 1.812525 GAGCTGGAGCAGATCGTCA 59.187 57.895 0.00 0.00 45.16 4.35
1332 1398 2.357575 GCTGGAGAGCTGGAGCAGA 61.358 63.158 0.00 0.00 45.16 4.26
1575 1641 1.112916 TGAGGCTGTTGACGGAGACA 61.113 55.000 0.00 0.00 0.00 3.41
1938 2013 4.796231 GTGACATCGCCGGACGCT 62.796 66.667 5.05 0.00 43.23 5.07
2381 2465 6.145048 CAGAAAAGAAAACAAGATGATGGTGC 59.855 38.462 0.00 0.00 0.00 5.01
2433 2532 4.571250 GGCGATGGCGATTCGATA 57.429 55.556 10.88 0.00 41.24 2.92
2538 2637 1.134521 CCACGCAGTAATCCTAGCCAA 60.135 52.381 0.00 0.00 41.61 4.52
2557 2656 0.179045 AGTTCCTATGATGGCGCACC 60.179 55.000 10.83 0.00 0.00 5.01
2602 2701 8.345565 ACTATCACTTATTGATGAATTTTCGCC 58.654 33.333 0.00 0.00 45.22 5.54
2610 2709 9.201989 AGTGGAGTACTATCACTTATTGATGAA 57.798 33.333 19.72 0.00 45.22 2.57
2612 2711 9.900710 GTAGTGGAGTACTATCACTTATTGATG 57.099 37.037 26.32 0.00 45.22 3.07
2618 2717 8.428063 GGAGTAGTAGTGGAGTACTATCACTTA 58.572 40.741 26.32 16.09 43.23 2.24
2619 2718 7.127647 AGGAGTAGTAGTGGAGTACTATCACTT 59.872 40.741 26.32 16.82 43.23 3.16
2620 2719 6.616548 AGGAGTAGTAGTGGAGTACTATCACT 59.383 42.308 25.19 25.19 43.23 3.41
2621 2720 6.829849 AGGAGTAGTAGTGGAGTACTATCAC 58.170 44.000 16.67 16.67 43.23 3.06
2622 2721 7.448915 AAGGAGTAGTAGTGGAGTACTATCA 57.551 40.000 0.00 0.00 43.23 2.15
2623 2722 9.271828 GTAAAGGAGTAGTAGTGGAGTACTATC 57.728 40.741 0.00 0.00 43.23 2.08
2625 2724 7.268586 CGTAAAGGAGTAGTAGTGGAGTACTA 58.731 42.308 0.00 0.00 43.23 1.82
2626 2725 6.112058 CGTAAAGGAGTAGTAGTGGAGTACT 58.888 44.000 0.00 0.00 45.43 2.73
2627 2726 5.220758 GCGTAAAGGAGTAGTAGTGGAGTAC 60.221 48.000 0.00 0.00 34.55 2.73
2628 2727 4.878397 GCGTAAAGGAGTAGTAGTGGAGTA 59.122 45.833 0.00 0.00 0.00 2.59
2630 2729 3.946558 AGCGTAAAGGAGTAGTAGTGGAG 59.053 47.826 0.00 0.00 0.00 3.86
2631 2730 3.960571 AGCGTAAAGGAGTAGTAGTGGA 58.039 45.455 0.00 0.00 0.00 4.02
2632 2731 4.261114 GCTAGCGTAAAGGAGTAGTAGTGG 60.261 50.000 0.00 0.00 0.00 4.00
2633 2732 4.552378 CGCTAGCGTAAAGGAGTAGTAGTG 60.552 50.000 28.66 0.00 34.35 2.74
2634 2733 3.559242 CGCTAGCGTAAAGGAGTAGTAGT 59.441 47.826 28.66 0.00 34.35 2.73
2635 2734 3.806521 TCGCTAGCGTAAAGGAGTAGTAG 59.193 47.826 34.10 2.90 40.74 2.57
2640 2739 0.098376 CGTCGCTAGCGTAAAGGAGT 59.902 55.000 34.10 0.00 40.74 3.85
2668 2767 0.673333 CACTGCACGGTGCCATTCTA 60.673 55.000 28.57 9.38 44.23 2.10
2742 2841 1.379710 CCGCCCATCAACCATTCCA 60.380 57.895 0.00 0.00 0.00 3.53
2743 2842 2.785425 GCCGCCCATCAACCATTCC 61.785 63.158 0.00 0.00 0.00 3.01
2747 2848 1.190833 AAATTGCCGCCCATCAACCA 61.191 50.000 0.00 0.00 0.00 3.67
2751 2852 1.388547 GAGTAAATTGCCGCCCATCA 58.611 50.000 0.00 0.00 0.00 3.07
2878 3030 2.042843 GCGGAAGAGAGAGGGGGA 60.043 66.667 0.00 0.00 0.00 4.81
2880 3034 4.214327 GCGCGGAAGAGAGAGGGG 62.214 72.222 8.83 0.00 0.00 4.79
2882 3036 2.103934 CAGCGCGGAAGAGAGAGG 59.896 66.667 8.83 0.00 0.00 3.69
2887 3041 0.951040 AAAGGAACAGCGCGGAAGAG 60.951 55.000 16.26 0.00 0.00 2.85
2889 3043 0.110192 GAAAAGGAACAGCGCGGAAG 60.110 55.000 16.26 2.24 0.00 3.46
2890 3044 0.534203 AGAAAAGGAACAGCGCGGAA 60.534 50.000 16.26 0.00 0.00 4.30
2891 3045 0.534203 AAGAAAAGGAACAGCGCGGA 60.534 50.000 16.26 0.00 0.00 5.54
2934 3092 1.354040 AGCGATGACGAAGCAGAAAG 58.646 50.000 0.00 0.00 42.66 2.62
2941 3100 3.245797 TCAGAGAAAAGCGATGACGAAG 58.754 45.455 0.00 0.00 42.66 3.79
3107 3512 6.769822 ACTAGCCTTCCATTCTATTCAATGTG 59.230 38.462 0.00 0.00 32.61 3.21
3126 3531 3.335579 CCAAGAGTACACCAAACTAGCC 58.664 50.000 0.00 0.00 0.00 3.93
3130 3535 1.878953 CGCCAAGAGTACACCAAACT 58.121 50.000 0.00 0.00 0.00 2.66
3460 4308 2.019249 TGCTTGCCAAGTATGAGATGC 58.981 47.619 6.28 0.00 0.00 3.91
3537 4407 3.978723 CTCACCGCTCACCGCTCAG 62.979 68.421 0.00 0.00 36.13 3.35
3559 4436 2.644992 GCAAGGCCAAGTGGTTCG 59.355 61.111 5.01 0.00 37.57 3.95
3766 4647 2.233355 GTCGTGTGCACATCAATTTCG 58.767 47.619 24.69 19.19 0.00 3.46
3767 4648 3.266541 TGTCGTGTGCACATCAATTTC 57.733 42.857 24.69 7.07 0.00 2.17
3768 4649 3.567530 CATGTCGTGTGCACATCAATTT 58.432 40.909 24.69 4.07 31.83 1.82
3769 4650 2.669113 GCATGTCGTGTGCACATCAATT 60.669 45.455 24.69 5.77 42.08 2.32
3770 4651 1.135603 GCATGTCGTGTGCACATCAAT 60.136 47.619 24.69 11.72 42.08 2.57
3771 4652 0.238025 GCATGTCGTGTGCACATCAA 59.762 50.000 24.69 9.80 42.08 2.57
3772 4653 0.883814 TGCATGTCGTGTGCACATCA 60.884 50.000 24.69 21.21 46.76 3.07
3773 4654 1.868306 TGCATGTCGTGTGCACATC 59.132 52.632 24.69 16.44 46.76 3.06
3774 4655 4.061949 TGCATGTCGTGTGCACAT 57.938 50.000 24.69 2.86 46.76 3.21
3778 4659 1.802715 GGCATTGCATGTCGTGTGC 60.803 57.895 11.39 0.00 42.81 4.57
3779 4660 1.153978 GGGCATTGCATGTCGTGTG 60.154 57.895 11.39 0.00 35.21 3.82
3780 4661 2.689785 CGGGCATTGCATGTCGTGT 61.690 57.895 11.39 0.00 35.21 4.49
3781 4662 1.717791 ATCGGGCATTGCATGTCGTG 61.718 55.000 11.39 0.00 35.21 4.35
3782 4663 1.451927 ATCGGGCATTGCATGTCGT 60.452 52.632 11.39 0.00 35.21 4.34
3783 4664 1.009335 CATCGGGCATTGCATGTCG 60.009 57.895 11.39 8.52 35.21 4.35
3784 4665 0.457035 AACATCGGGCATTGCATGTC 59.543 50.000 11.39 0.00 0.00 3.06
3785 4666 1.761449 TAACATCGGGCATTGCATGT 58.239 45.000 11.39 8.95 0.00 3.21
3786 4667 2.293955 TGATAACATCGGGCATTGCATG 59.706 45.455 11.39 8.31 0.00 4.06
3787 4668 2.585330 TGATAACATCGGGCATTGCAT 58.415 42.857 11.39 0.00 0.00 3.96
3788 4669 2.049888 TGATAACATCGGGCATTGCA 57.950 45.000 11.39 0.00 0.00 4.08
3789 4670 3.424829 CGTATGATAACATCGGGCATTGC 60.425 47.826 0.00 0.00 37.87 3.56
3790 4671 3.125146 CCGTATGATAACATCGGGCATTG 59.875 47.826 12.73 0.00 40.22 2.82
3791 4672 3.334691 CCGTATGATAACATCGGGCATT 58.665 45.455 12.73 0.00 40.22 3.56
3792 4673 2.972625 CCGTATGATAACATCGGGCAT 58.027 47.619 12.73 0.00 40.22 4.40
3793 4674 2.448926 CCGTATGATAACATCGGGCA 57.551 50.000 12.73 0.00 40.22 5.36
3796 4677 3.380479 ACACCCGTATGATAACATCGG 57.620 47.619 13.27 13.27 41.77 4.18
3797 4678 3.910170 CGTACACCCGTATGATAACATCG 59.090 47.826 0.00 0.00 36.84 3.84
3798 4679 3.671928 GCGTACACCCGTATGATAACATC 59.328 47.826 0.00 0.00 36.84 3.06
3799 4680 3.319972 AGCGTACACCCGTATGATAACAT 59.680 43.478 0.00 0.00 36.84 2.71
3800 4681 2.689471 AGCGTACACCCGTATGATAACA 59.311 45.455 0.00 0.00 36.84 2.41
3801 4682 3.047796 CAGCGTACACCCGTATGATAAC 58.952 50.000 0.00 0.00 36.84 1.89
3802 4683 2.544277 GCAGCGTACACCCGTATGATAA 60.544 50.000 0.00 0.00 36.84 1.75
3803 4684 1.001048 GCAGCGTACACCCGTATGATA 60.001 52.381 0.00 0.00 36.84 2.15
3804 4685 0.249322 GCAGCGTACACCCGTATGAT 60.249 55.000 0.00 0.00 36.84 2.45
3805 4686 1.140161 GCAGCGTACACCCGTATGA 59.860 57.895 0.00 0.00 36.84 2.15
3806 4687 0.529773 ATGCAGCGTACACCCGTATG 60.530 55.000 0.00 0.00 37.62 2.39
3807 4688 0.529773 CATGCAGCGTACACCCGTAT 60.530 55.000 0.00 0.00 0.00 3.06
3808 4689 1.153726 CATGCAGCGTACACCCGTA 60.154 57.895 0.00 0.00 0.00 4.02
3809 4690 2.434185 CATGCAGCGTACACCCGT 60.434 61.111 0.00 0.00 0.00 5.28
3810 4691 2.434185 ACATGCAGCGTACACCCG 60.434 61.111 0.00 0.00 0.00 5.28
3811 4692 2.398554 CCACATGCAGCGTACACCC 61.399 63.158 0.00 0.00 0.00 4.61
3819 4700 3.401182 TGAAATTTTTCCCACATGCAGC 58.599 40.909 0.00 0.00 36.36 5.25
4019 4900 3.450578 ACGTAACGTAATATGGTGGCAG 58.549 45.455 0.00 0.00 38.73 4.85
4062 5001 3.062763 ACAACTGCGATTCTGAACTCAG 58.937 45.455 0.00 0.00 45.08 3.35
4069 5011 3.885484 ACTTTGACAACTGCGATTCTG 57.115 42.857 0.00 0.00 0.00 3.02
4091 5033 9.856488 TTAGTCAAAATCTCATACTGTACTGTC 57.144 33.333 8.85 0.00 0.00 3.51
4092 5034 9.862371 CTTAGTCAAAATCTCATACTGTACTGT 57.138 33.333 10.46 10.46 0.00 3.55
4093 5035 8.812329 GCTTAGTCAAAATCTCATACTGTACTG 58.188 37.037 0.00 0.00 0.00 2.74
4094 5036 8.754080 AGCTTAGTCAAAATCTCATACTGTACT 58.246 33.333 0.00 0.00 0.00 2.73
4095 5037 8.812329 CAGCTTAGTCAAAATCTCATACTGTAC 58.188 37.037 0.00 0.00 0.00 2.90
4096 5038 8.749354 TCAGCTTAGTCAAAATCTCATACTGTA 58.251 33.333 0.00 0.00 0.00 2.74
4261 7031 2.637025 CGACCCCTGCGTTGTTTG 59.363 61.111 0.00 0.00 0.00 2.93
4262 7032 2.593436 CCGACCCCTGCGTTGTTT 60.593 61.111 0.00 0.00 0.00 2.83
4269 7039 4.115199 AGAATGGCCGACCCCTGC 62.115 66.667 0.00 0.00 33.59 4.85
4270 7040 2.124570 CAGAATGGCCGACCCCTG 60.125 66.667 0.00 0.00 33.59 4.45
4271 7041 4.115199 GCAGAATGGCCGACCCCT 62.115 66.667 0.00 0.00 35.86 4.79
4272 7042 4.115199 AGCAGAATGGCCGACCCC 62.115 66.667 0.00 0.00 35.86 4.95
4305 7075 3.786553 TGAGGGAAGGCAAGTACTCTAA 58.213 45.455 0.00 0.00 0.00 2.10
4338 7108 5.381757 TGTGGTTTTTGGCAAGTACTCTAT 58.618 37.500 0.00 0.00 0.00 1.98
4339 7109 4.783055 TGTGGTTTTTGGCAAGTACTCTA 58.217 39.130 0.00 0.00 0.00 2.43
4340 7110 3.626930 TGTGGTTTTTGGCAAGTACTCT 58.373 40.909 0.00 0.00 0.00 3.24
4396 7244 5.333416 GCAAGGAAGCACGTATAGCTATTTC 60.333 44.000 12.39 8.18 42.53 2.17
4753 7602 9.607988 CACTACCAACTACCATCAATATACAAA 57.392 33.333 0.00 0.00 0.00 2.83
4829 7695 1.263217 GGTCACAAACAACGCTGGTAG 59.737 52.381 0.00 0.00 0.00 3.18
4838 7704 4.339814 GGAAATGGTAGTGGTCACAAACAA 59.660 41.667 3.82 0.00 0.00 2.83
4908 7781 3.541632 ACTAATACATGCCACTTTCCGG 58.458 45.455 0.00 0.00 0.00 5.14
4925 7798 5.516044 TCTGGCAGGTACATTCTAGACTAA 58.484 41.667 15.73 0.00 0.00 2.24
4940 7813 1.027357 AAATAAGCGCATCTGGCAGG 58.973 50.000 15.73 0.00 45.17 4.85
5056 7948 3.233578 CCACAACCGAAACAATCAATCG 58.766 45.455 0.00 0.00 36.39 3.34
5094 7986 1.093159 CAAAGAGGGCAGCTCATGTC 58.907 55.000 0.00 0.00 0.00 3.06
5182 8112 0.182537 TGGTCCATGATTAAGGGGCG 59.817 55.000 0.00 0.00 0.00 6.13
5187 8117 6.825213 TCATCTTGAACTGGTCCATGATTAAG 59.175 38.462 0.00 0.00 0.00 1.85
5371 8512 8.693542 TTAGTTTCGGCAGTATCTTAGTTAAC 57.306 34.615 0.00 0.00 0.00 2.01
5463 8612 3.126858 TGACGAATGGCACTAGCAAAATC 59.873 43.478 0.00 0.00 44.61 2.17
5479 8628 3.936453 CCCGGTGAGAAATATTTGACGAA 59.064 43.478 5.17 0.00 0.00 3.85
5832 9053 3.319198 GGGGACTTGCCGGTGAGA 61.319 66.667 1.90 0.00 37.63 3.27
5991 9218 3.975591 ATGGCCACCTGCAGCAGT 61.976 61.111 21.26 6.66 43.89 4.40
6208 9438 1.344763 GAGGCGCCAGGACACTATTAT 59.655 52.381 31.54 1.45 0.00 1.28
6211 9441 0.106167 TAGAGGCGCCAGGACACTAT 60.106 55.000 31.54 3.33 0.00 2.12
6213 9443 1.381872 ATAGAGGCGCCAGGACACT 60.382 57.895 31.54 18.38 0.00 3.55
6214 9444 1.227380 CATAGAGGCGCCAGGACAC 60.227 63.158 31.54 12.08 0.00 3.67
6215 9445 1.676678 GACATAGAGGCGCCAGGACA 61.677 60.000 31.54 9.09 0.00 4.02
6216 9446 1.068250 GACATAGAGGCGCCAGGAC 59.932 63.158 31.54 16.56 0.00 3.85
6217 9447 0.760567 ATGACATAGAGGCGCCAGGA 60.761 55.000 31.54 13.43 0.00 3.86
6218 9448 0.602106 CATGACATAGAGGCGCCAGG 60.602 60.000 31.54 12.88 0.00 4.45
6219 9449 0.105593 ACATGACATAGAGGCGCCAG 59.894 55.000 31.54 14.95 0.00 4.85
6223 9454 3.242543 GCAAAGAACATGACATAGAGGCG 60.243 47.826 0.00 0.00 0.00 5.52
6228 9459 4.460382 ACTTGGGCAAAGAACATGACATAG 59.540 41.667 9.04 0.00 39.38 2.23
6288 9755 4.608890 GCGAAAAATCGACTGAAACCGTAA 60.609 41.667 1.91 0.00 34.64 3.18
6335 9802 2.595463 TCGTCACCGTCGTCCCTT 60.595 61.111 0.00 0.00 35.01 3.95
6350 9819 0.237761 ACCGTCAACTCTCGAACTCG 59.762 55.000 0.00 0.00 41.45 4.18
6472 9941 1.755959 CTCACTCCAGAGTCCAGGATG 59.244 57.143 0.00 4.57 40.20 3.51
6473 9942 1.360852 ACTCACTCCAGAGTCCAGGAT 59.639 52.381 0.00 0.00 45.35 3.24
6474 9943 0.780637 ACTCACTCCAGAGTCCAGGA 59.219 55.000 0.00 2.26 45.35 3.86
6549 10022 6.579666 ATTCGCATGGTATTATTGATGCTT 57.420 33.333 0.00 0.00 39.26 3.91
6716 10191 1.410004 TATGGAGCTCCGGTTGTAGG 58.590 55.000 27.43 0.00 39.43 3.18
6720 10195 3.614399 GGATATGGAGCTCCGGTTG 57.386 57.895 27.43 0.00 39.43 3.77
6725 10200 2.665603 GGGCGGATATGGAGCTCC 59.334 66.667 26.78 26.78 0.00 4.70
6726 10201 1.768684 TTGGGGCGGATATGGAGCTC 61.769 60.000 4.71 4.71 0.00 4.09
6727 10202 1.352622 TTTGGGGCGGATATGGAGCT 61.353 55.000 0.00 0.00 0.00 4.09
6728 10203 1.150536 TTTGGGGCGGATATGGAGC 59.849 57.895 0.00 0.00 0.00 4.70
6729 10204 0.182537 TGTTTGGGGCGGATATGGAG 59.817 55.000 0.00 0.00 0.00 3.86
6730 10205 0.850100 ATGTTTGGGGCGGATATGGA 59.150 50.000 0.00 0.00 0.00 3.41
6731 10206 1.247567 GATGTTTGGGGCGGATATGG 58.752 55.000 0.00 0.00 0.00 2.74
6732 10207 1.247567 GGATGTTTGGGGCGGATATG 58.752 55.000 0.00 0.00 0.00 1.78
6733 10208 0.250727 CGGATGTTTGGGGCGGATAT 60.251 55.000 0.00 0.00 0.00 1.63
6734 10209 1.147376 CGGATGTTTGGGGCGGATA 59.853 57.895 0.00 0.00 0.00 2.59
6735 10210 2.124320 CGGATGTTTGGGGCGGAT 60.124 61.111 0.00 0.00 0.00 4.18
6736 10211 4.418328 CCGGATGTTTGGGGCGGA 62.418 66.667 0.00 0.00 0.00 5.54
6739 10214 3.352990 TAGGCCGGATGTTTGGGGC 62.353 63.158 5.05 0.00 46.00 5.80
6740 10215 1.453197 GTAGGCCGGATGTTTGGGG 60.453 63.158 5.05 0.00 0.00 4.96
6741 10216 1.453197 GGTAGGCCGGATGTTTGGG 60.453 63.158 5.05 0.00 0.00 4.12
6742 10217 1.453197 GGGTAGGCCGGATGTTTGG 60.453 63.158 5.05 0.00 34.97 3.28
6743 10218 1.817941 CGGGTAGGCCGGATGTTTG 60.818 63.158 5.05 0.00 37.28 2.93
6744 10219 2.587889 CGGGTAGGCCGGATGTTT 59.412 61.111 5.05 0.00 37.28 2.83
6751 10226 2.203015 CAATGACCGGGTAGGCCG 60.203 66.667 6.32 0.00 46.52 6.13
6752 10227 0.746923 GAACAATGACCGGGTAGGCC 60.747 60.000 6.32 0.00 46.52 5.19
6753 10228 0.252197 AGAACAATGACCGGGTAGGC 59.748 55.000 6.32 0.00 46.52 3.93
6754 10229 2.677037 GTCAGAACAATGACCGGGTAGG 60.677 54.545 6.32 0.00 43.12 3.18
6755 10230 2.618053 GTCAGAACAATGACCGGGTAG 58.382 52.381 6.32 0.00 43.12 3.18
6756 10231 2.754946 GTCAGAACAATGACCGGGTA 57.245 50.000 6.32 0.00 43.12 3.69
6757 10232 3.625745 GTCAGAACAATGACCGGGT 57.374 52.632 6.32 0.00 43.12 5.28
6763 10238 2.920724 TCGGTTGGTCAGAACAATGA 57.079 45.000 3.63 3.11 0.00 2.57
6764 10239 3.753272 AGATTCGGTTGGTCAGAACAATG 59.247 43.478 3.63 0.52 33.57 2.82
6765 10240 3.753272 CAGATTCGGTTGGTCAGAACAAT 59.247 43.478 3.63 0.00 33.57 2.71
6766 10241 3.138304 CAGATTCGGTTGGTCAGAACAA 58.862 45.455 0.00 0.00 33.57 2.83
6767 10242 2.549992 CCAGATTCGGTTGGTCAGAACA 60.550 50.000 0.00 0.00 33.57 3.18
6768 10243 2.076863 CCAGATTCGGTTGGTCAGAAC 58.923 52.381 0.00 0.00 33.57 3.01
6769 10244 1.610624 GCCAGATTCGGTTGGTCAGAA 60.611 52.381 0.00 0.00 36.81 3.02
6770 10245 0.036388 GCCAGATTCGGTTGGTCAGA 60.036 55.000 0.00 0.00 36.81 3.27
6771 10246 0.321564 TGCCAGATTCGGTTGGTCAG 60.322 55.000 0.00 0.00 36.81 3.51
6772 10247 0.109532 TTGCCAGATTCGGTTGGTCA 59.890 50.000 0.00 0.00 36.81 4.02
6773 10248 1.243902 TTTGCCAGATTCGGTTGGTC 58.756 50.000 0.00 0.00 36.81 4.02
6774 10249 1.545582 CATTTGCCAGATTCGGTTGGT 59.454 47.619 0.00 0.00 36.81 3.67
6775 10250 1.736696 GCATTTGCCAGATTCGGTTGG 60.737 52.381 0.00 0.00 37.53 3.77
6776 10251 1.067706 TGCATTTGCCAGATTCGGTTG 60.068 47.619 0.00 0.00 41.18 3.77
6777 10252 1.203052 CTGCATTTGCCAGATTCGGTT 59.797 47.619 0.00 0.00 41.18 4.44
6778 10253 0.813184 CTGCATTTGCCAGATTCGGT 59.187 50.000 0.00 0.00 41.18 4.69
6779 10254 0.813184 ACTGCATTTGCCAGATTCGG 59.187 50.000 0.00 0.00 41.18 4.30
6780 10255 1.202222 GGACTGCATTTGCCAGATTCG 60.202 52.381 0.00 0.00 41.18 3.34
6781 10256 1.820519 TGGACTGCATTTGCCAGATTC 59.179 47.619 0.00 0.00 41.18 2.52
6782 10257 1.927487 TGGACTGCATTTGCCAGATT 58.073 45.000 0.00 0.00 41.18 2.40
6783 10258 1.927487 TTGGACTGCATTTGCCAGAT 58.073 45.000 0.00 0.00 41.18 2.90
6784 10259 1.340889 GTTTGGACTGCATTTGCCAGA 59.659 47.619 0.00 0.00 41.18 3.86
6785 10260 1.787012 GTTTGGACTGCATTTGCCAG 58.213 50.000 0.00 0.86 41.18 4.85
6786 10261 0.031857 CGTTTGGACTGCATTTGCCA 59.968 50.000 0.00 0.00 41.18 4.92
6787 10262 0.031994 ACGTTTGGACTGCATTTGCC 59.968 50.000 0.00 0.00 41.18 4.52
6788 10263 1.851658 AACGTTTGGACTGCATTTGC 58.148 45.000 0.00 0.00 42.50 3.68
6789 10264 3.443037 TCAAACGTTTGGACTGCATTTG 58.557 40.909 33.97 10.98 38.66 2.32
6790 10265 3.791973 TCAAACGTTTGGACTGCATTT 57.208 38.095 33.97 0.00 38.66 2.32
6791 10266 4.320608 AATCAAACGTTTGGACTGCATT 57.679 36.364 33.97 23.49 38.66 3.56
6792 10267 4.320608 AAATCAAACGTTTGGACTGCAT 57.679 36.364 33.97 19.71 38.66 3.96
6793 10268 3.791973 AAATCAAACGTTTGGACTGCA 57.208 38.095 33.97 18.44 38.66 4.41
6812 10287 3.198853 CAGGGGGTTCTTTTGGACAAAAA 59.801 43.478 10.95 0.25 39.49 1.94
6813 10288 2.769095 CAGGGGGTTCTTTTGGACAAAA 59.231 45.455 9.58 9.58 37.90 2.44
6814 10289 2.393646 CAGGGGGTTCTTTTGGACAAA 58.606 47.619 0.00 0.00 0.00 2.83
6815 10290 2.032151 GCAGGGGGTTCTTTTGGACAA 61.032 52.381 0.00 0.00 0.00 3.18
6816 10291 0.469144 GCAGGGGGTTCTTTTGGACA 60.469 55.000 0.00 0.00 0.00 4.02
6817 10292 1.185618 GGCAGGGGGTTCTTTTGGAC 61.186 60.000 0.00 0.00 0.00 4.02
6818 10293 1.155155 GGCAGGGGGTTCTTTTGGA 59.845 57.895 0.00 0.00 0.00 3.53
6819 10294 2.275380 CGGCAGGGGGTTCTTTTGG 61.275 63.158 0.00 0.00 0.00 3.28
6820 10295 0.825840 TTCGGCAGGGGGTTCTTTTG 60.826 55.000 0.00 0.00 0.00 2.44
6821 10296 0.826256 GTTCGGCAGGGGGTTCTTTT 60.826 55.000 0.00 0.00 0.00 2.27
6822 10297 1.228459 GTTCGGCAGGGGGTTCTTT 60.228 57.895 0.00 0.00 0.00 2.52
6823 10298 2.434774 GTTCGGCAGGGGGTTCTT 59.565 61.111 0.00 0.00 0.00 2.52
6824 10299 4.016706 CGTTCGGCAGGGGGTTCT 62.017 66.667 0.00 0.00 0.00 3.01
6834 10309 1.202031 CCTTTGACAATAGCGTTCGGC 60.202 52.381 0.00 0.00 44.05 5.54
6835 10310 2.093783 GTCCTTTGACAATAGCGTTCGG 59.906 50.000 0.00 0.00 41.37 4.30
6836 10311 2.993899 AGTCCTTTGACAATAGCGTTCG 59.006 45.455 0.00 0.00 44.33 3.95
6837 10312 6.019479 CAGATAGTCCTTTGACAATAGCGTTC 60.019 42.308 0.00 0.00 44.33 3.95
6838 10313 5.812642 CAGATAGTCCTTTGACAATAGCGTT 59.187 40.000 0.00 0.00 44.33 4.84
6839 10314 5.352284 CAGATAGTCCTTTGACAATAGCGT 58.648 41.667 0.00 0.00 44.33 5.07
6840 10315 4.210120 GCAGATAGTCCTTTGACAATAGCG 59.790 45.833 0.00 0.00 44.33 4.26
6841 10316 5.118990 TGCAGATAGTCCTTTGACAATAGC 58.881 41.667 0.00 0.00 44.33 2.97
6842 10317 6.577103 TCTGCAGATAGTCCTTTGACAATAG 58.423 40.000 13.74 0.00 44.33 1.73
6843 10318 6.544928 TCTGCAGATAGTCCTTTGACAATA 57.455 37.500 13.74 0.00 44.33 1.90
6844 10319 5.426689 TCTGCAGATAGTCCTTTGACAAT 57.573 39.130 13.74 0.00 44.33 2.71
6845 10320 4.890158 TCTGCAGATAGTCCTTTGACAA 57.110 40.909 13.74 0.00 44.33 3.18
6846 10321 6.544928 TTATCTGCAGATAGTCCTTTGACA 57.455 37.500 29.98 13.39 38.67 3.58
6847 10322 7.849804 TTTTATCTGCAGATAGTCCTTTGAC 57.150 36.000 29.98 0.00 38.18 3.18
6848 10323 7.064609 CGTTTTTATCTGCAGATAGTCCTTTGA 59.935 37.037 29.98 14.68 38.18 2.69
6849 10324 7.148407 ACGTTTTTATCTGCAGATAGTCCTTTG 60.148 37.037 29.98 20.86 38.18 2.77
6850 10325 6.879458 ACGTTTTTATCTGCAGATAGTCCTTT 59.121 34.615 29.98 15.72 38.18 3.11
6851 10326 6.407202 ACGTTTTTATCTGCAGATAGTCCTT 58.593 36.000 29.98 15.29 38.18 3.36
6852 10327 5.978814 ACGTTTTTATCTGCAGATAGTCCT 58.021 37.500 29.98 12.78 38.18 3.85
6853 10328 5.810587 TGACGTTTTTATCTGCAGATAGTCC 59.189 40.000 30.65 21.78 38.18 3.85
6854 10329 6.887376 TGACGTTTTTATCTGCAGATAGTC 57.113 37.500 28.97 28.97 38.18 2.59
6855 10330 7.667043 TTTGACGTTTTTATCTGCAGATAGT 57.333 32.000 29.98 24.66 38.18 2.12
6856 10331 8.948853 TTTTTGACGTTTTTATCTGCAGATAG 57.051 30.769 29.98 22.13 38.18 2.08
6857 10332 8.020819 CCTTTTTGACGTTTTTATCTGCAGATA 58.979 33.333 28.69 28.69 36.05 1.98
6858 10333 6.863126 CCTTTTTGACGTTTTTATCTGCAGAT 59.137 34.615 30.85 30.85 38.51 2.90
6859 10334 6.038825 TCCTTTTTGACGTTTTTATCTGCAGA 59.961 34.615 20.79 20.79 0.00 4.26
6860 10335 6.142320 GTCCTTTTTGACGTTTTTATCTGCAG 59.858 38.462 7.63 7.63 0.00 4.41
6861 10336 5.974751 GTCCTTTTTGACGTTTTTATCTGCA 59.025 36.000 0.00 0.00 0.00 4.41
6862 10337 5.401376 GGTCCTTTTTGACGTTTTTATCTGC 59.599 40.000 0.00 0.00 36.07 4.26
6863 10338 5.918576 GGGTCCTTTTTGACGTTTTTATCTG 59.081 40.000 0.00 0.00 36.07 2.90
6864 10339 5.010314 GGGGTCCTTTTTGACGTTTTTATCT 59.990 40.000 0.00 0.00 36.07 1.98
6865 10340 5.224888 GGGGTCCTTTTTGACGTTTTTATC 58.775 41.667 0.00 0.00 36.07 1.75
6866 10341 4.039488 GGGGGTCCTTTTTGACGTTTTTAT 59.961 41.667 0.00 0.00 36.07 1.40
6867 10342 3.384146 GGGGGTCCTTTTTGACGTTTTTA 59.616 43.478 0.00 0.00 36.07 1.52
6868 10343 2.168936 GGGGGTCCTTTTTGACGTTTTT 59.831 45.455 0.00 0.00 36.07 1.94
6869 10344 1.758280 GGGGGTCCTTTTTGACGTTTT 59.242 47.619 0.00 0.00 36.07 2.43
6870 10345 1.063492 AGGGGGTCCTTTTTGACGTTT 60.063 47.619 0.00 0.00 41.56 3.60
6871 10346 0.554305 AGGGGGTCCTTTTTGACGTT 59.446 50.000 0.00 0.00 41.56 3.99
6872 10347 0.179001 CAGGGGGTCCTTTTTGACGT 60.179 55.000 0.00 0.00 42.67 4.34
6873 10348 0.109723 TCAGGGGGTCCTTTTTGACG 59.890 55.000 0.00 0.00 42.67 4.35
6874 10349 1.133606 TGTCAGGGGGTCCTTTTTGAC 60.134 52.381 8.47 8.47 42.67 3.18
6875 10350 1.227249 TGTCAGGGGGTCCTTTTTGA 58.773 50.000 0.00 0.00 42.67 2.69
6876 10351 1.963515 CTTGTCAGGGGGTCCTTTTTG 59.036 52.381 0.00 0.00 42.67 2.44
6877 10352 1.573857 ACTTGTCAGGGGGTCCTTTTT 59.426 47.619 0.00 0.00 42.67 1.94
6878 10353 1.133482 CACTTGTCAGGGGGTCCTTTT 60.133 52.381 0.00 0.00 42.67 2.27
6879 10354 0.478507 CACTTGTCAGGGGGTCCTTT 59.521 55.000 0.00 0.00 42.67 3.11
6880 10355 1.427072 CCACTTGTCAGGGGGTCCTT 61.427 60.000 0.00 0.00 40.51 3.36
6881 10356 1.847968 CCACTTGTCAGGGGGTCCT 60.848 63.158 0.00 0.00 40.51 3.85
6882 10357 2.757077 CCACTTGTCAGGGGGTCC 59.243 66.667 0.00 0.00 40.51 4.46
6883 10358 2.034221 GCCACTTGTCAGGGGGTC 59.966 66.667 4.97 0.00 45.21 4.46
6884 10359 3.953775 CGCCACTTGTCAGGGGGT 61.954 66.667 4.97 0.00 45.21 4.95
6885 10360 4.722700 CCGCCACTTGTCAGGGGG 62.723 72.222 0.00 0.00 45.21 5.40
6887 10362 4.641645 TGCCGCCACTTGTCAGGG 62.642 66.667 0.00 0.00 0.00 4.45
6888 10363 3.052082 CTGCCGCCACTTGTCAGG 61.052 66.667 0.00 0.00 0.00 3.86
6889 10364 3.052082 CCTGCCGCCACTTGTCAG 61.052 66.667 0.00 0.00 0.00 3.51
6890 10365 3.872603 ACCTGCCGCCACTTGTCA 61.873 61.111 0.00 0.00 0.00 3.58
6891 10366 3.357079 CACCTGCCGCCACTTGTC 61.357 66.667 0.00 0.00 0.00 3.18
6982 10457 3.645157 GAATCCGTTGTGCACCGCG 62.645 63.158 15.69 17.75 0.00 6.46
6983 10458 2.175811 GAATCCGTTGTGCACCGC 59.824 61.111 15.69 6.01 0.00 5.68
6984 10459 2.474266 CGAATCCGTTGTGCACCG 59.526 61.111 15.69 11.55 0.00 4.94
6985 10460 2.867472 CCGAATCCGTTGTGCACC 59.133 61.111 15.69 0.00 0.00 5.01
6986 10461 1.922135 ATGCCGAATCCGTTGTGCAC 61.922 55.000 10.75 10.75 33.48 4.57
6987 10462 0.391793 TATGCCGAATCCGTTGTGCA 60.392 50.000 0.00 0.00 34.71 4.57
6988 10463 0.304705 CTATGCCGAATCCGTTGTGC 59.695 55.000 0.00 0.00 0.00 4.57
6989 10464 1.327460 CACTATGCCGAATCCGTTGTG 59.673 52.381 0.00 0.00 0.00 3.33
6990 10465 1.651987 CACTATGCCGAATCCGTTGT 58.348 50.000 0.00 0.00 0.00 3.32
6991 10466 0.304705 GCACTATGCCGAATCCGTTG 59.695 55.000 0.00 0.00 37.42 4.10
6992 10467 0.107897 TGCACTATGCCGAATCCGTT 60.108 50.000 0.00 0.00 44.23 4.44
6993 10468 0.107897 TTGCACTATGCCGAATCCGT 60.108 50.000 0.00 0.00 44.23 4.69
6994 10469 0.304705 GTTGCACTATGCCGAATCCG 59.695 55.000 0.00 0.00 44.23 4.18
6995 10470 0.304705 CGTTGCACTATGCCGAATCC 59.695 55.000 0.00 0.00 44.23 3.01
6996 10471 1.286501 TCGTTGCACTATGCCGAATC 58.713 50.000 0.00 0.00 44.23 2.52
6997 10472 1.732941 TTCGTTGCACTATGCCGAAT 58.267 45.000 9.75 0.00 44.23 3.34
6998 10473 1.195900 GTTTCGTTGCACTATGCCGAA 59.804 47.619 9.75 9.75 44.23 4.30
6999 10474 0.793861 GTTTCGTTGCACTATGCCGA 59.206 50.000 0.00 0.00 44.23 5.54
7000 10475 0.518355 CGTTTCGTTGCACTATGCCG 60.518 55.000 0.00 0.00 44.23 5.69
7001 10476 0.179200 CCGTTTCGTTGCACTATGCC 60.179 55.000 0.00 0.00 44.23 4.40
7002 10477 0.179200 CCCGTTTCGTTGCACTATGC 60.179 55.000 0.00 0.00 45.29 3.14
7003 10478 1.136085 CACCCGTTTCGTTGCACTATG 60.136 52.381 0.00 0.00 0.00 2.23
7004 10479 1.153353 CACCCGTTTCGTTGCACTAT 58.847 50.000 0.00 0.00 0.00 2.12
7005 10480 0.104487 TCACCCGTTTCGTTGCACTA 59.896 50.000 0.00 0.00 0.00 2.74
7006 10481 1.153329 TCACCCGTTTCGTTGCACT 60.153 52.632 0.00 0.00 0.00 4.40
7007 10482 1.278637 CTCACCCGTTTCGTTGCAC 59.721 57.895 0.00 0.00 0.00 4.57
7008 10483 1.890041 CCTCACCCGTTTCGTTGCA 60.890 57.895 0.00 0.00 0.00 4.08
7009 10484 2.943653 CCTCACCCGTTTCGTTGC 59.056 61.111 0.00 0.00 0.00 4.17
7010 10485 2.613506 GGCCTCACCCGTTTCGTTG 61.614 63.158 0.00 0.00 0.00 4.10
7011 10486 2.281276 GGCCTCACCCGTTTCGTT 60.281 61.111 0.00 0.00 0.00 3.85
7012 10487 3.530910 CTGGCCTCACCCGTTTCGT 62.531 63.158 3.32 0.00 37.83 3.85
7013 10488 2.742372 CTGGCCTCACCCGTTTCG 60.742 66.667 3.32 0.00 37.83 3.46
7014 10489 2.359975 CCTGGCCTCACCCGTTTC 60.360 66.667 3.32 0.00 37.83 2.78
7015 10490 3.175710 ACCTGGCCTCACCCGTTT 61.176 61.111 3.32 0.00 37.83 3.60
7016 10491 3.953775 CACCTGGCCTCACCCGTT 61.954 66.667 3.32 0.00 37.83 4.44
7081 10556 4.790962 ATGCTGCTGTCGGCCTGG 62.791 66.667 0.00 0.00 43.94 4.45
7082 10557 3.200593 GATGCTGCTGTCGGCCTG 61.201 66.667 0.00 0.00 43.94 4.85
7083 10558 2.866085 GAAGATGCTGCTGTCGGCCT 62.866 60.000 0.00 0.00 43.94 5.19
7084 10559 2.437359 AAGATGCTGCTGTCGGCC 60.437 61.111 0.00 0.00 43.94 6.13
7085 10560 1.742880 TGAAGATGCTGCTGTCGGC 60.743 57.895 0.00 0.00 44.80 5.54
7086 10561 1.690283 CGTGAAGATGCTGCTGTCGG 61.690 60.000 0.00 0.00 0.00 4.79
7087 10562 1.690283 CCGTGAAGATGCTGCTGTCG 61.690 60.000 0.00 0.00 0.00 4.35
7088 10563 1.364626 CCCGTGAAGATGCTGCTGTC 61.365 60.000 0.00 0.00 0.00 3.51
7089 10564 1.376424 CCCGTGAAGATGCTGCTGT 60.376 57.895 0.00 0.00 0.00 4.40
7090 10565 0.674581 TTCCCGTGAAGATGCTGCTG 60.675 55.000 0.00 0.00 0.00 4.41
7091 10566 1.679311 TTCCCGTGAAGATGCTGCT 59.321 52.632 0.00 0.00 0.00 4.24
7092 10567 4.301505 TTCCCGTGAAGATGCTGC 57.698 55.556 0.00 0.00 0.00 5.25
7100 10575 4.735132 CGCCTCGCTTCCCGTGAA 62.735 66.667 0.00 0.00 38.35 3.18
7151 10626 4.720902 TCCTGGTGCACGCATGGG 62.721 66.667 11.45 8.44 0.00 4.00
7152 10627 2.520465 TACTCCTGGTGCACGCATGG 62.520 60.000 11.45 9.95 0.00 3.66
7153 10628 1.079197 TACTCCTGGTGCACGCATG 60.079 57.895 11.45 7.43 0.00 4.06
7154 10629 1.079127 GTACTCCTGGTGCACGCAT 60.079 57.895 11.45 0.00 0.00 4.73
7155 10630 2.342279 GTACTCCTGGTGCACGCA 59.658 61.111 11.45 9.21 0.00 5.24
7156 10631 2.809601 CGTACTCCTGGTGCACGC 60.810 66.667 11.45 4.50 0.00 5.34
7157 10632 1.733041 CACGTACTCCTGGTGCACG 60.733 63.158 17.34 17.34 36.37 5.34
7158 10633 1.374252 CCACGTACTCCTGGTGCAC 60.374 63.158 8.80 8.80 0.00 4.57
7159 10634 1.835267 ACCACGTACTCCTGGTGCA 60.835 57.895 6.06 0.00 39.44 4.57
7160 10635 3.057337 ACCACGTACTCCTGGTGC 58.943 61.111 6.06 0.00 39.44 5.01



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.