Multiple sequence alignment - TraesCS3A01G213000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G213000 chr3A 100.000 5546 0 0 1 5546 384309977 384315522 0.000000e+00 10242.0
1 TraesCS3A01G213000 chr3D 95.277 2562 84 15 713 3264 291757244 291759778 0.000000e+00 4026.0
2 TraesCS3A01G213000 chr3D 92.336 1892 112 22 3315 5196 291759929 291761797 0.000000e+00 2660.0
3 TraesCS3A01G213000 chr3D 94.643 56 3 0 5393 5448 578356133 578356188 2.750000e-13 87.9
4 TraesCS3A01G213000 chr3D 92.857 56 4 0 5393 5448 5478120 5478175 1.280000e-11 82.4
5 TraesCS3A01G213000 chr3B 94.648 2560 98 14 713 3264 384885251 384887779 0.000000e+00 3932.0
6 TraesCS3A01G213000 chr3B 93.957 2085 98 16 3315 5389 384887929 384889995 0.000000e+00 3127.0
7 TraesCS3A01G213000 chr3B 92.806 139 8 1 5410 5546 384890048 384890186 3.390000e-47 200.0
8 TraesCS3A01G213000 chr3B 92.982 57 4 0 5393 5449 730376853 730376797 3.560000e-12 84.2
9 TraesCS3A01G213000 chr3B 92.982 57 4 0 5393 5449 730412869 730412813 3.560000e-12 84.2
10 TraesCS3A01G213000 chr3B 97.561 41 0 1 628 668 776230138 776230177 9.970000e-08 69.4
11 TraesCS3A01G213000 chr5D 89.565 230 17 7 2 230 277830372 277830149 9.090000e-73 285.0
12 TraesCS3A01G213000 chr5B 89.520 229 18 4 2 229 316025425 316025202 9.090000e-73 285.0
13 TraesCS3A01G213000 chr5B 89.130 184 20 0 1805 1988 576520153 576520336 4.320000e-56 230.0
14 TraesCS3A01G213000 chr5B 85.165 182 17 3 1986 2159 576520402 576520581 1.590000e-40 178.0
15 TraesCS3A01G213000 chr5B 92.857 56 4 0 5393 5448 588660864 588660919 1.280000e-11 82.4
16 TraesCS3A01G213000 chr5B 100.000 32 0 0 2554 2585 576520121 576520152 6.000000e-05 60.2
17 TraesCS3A01G213000 chr1D 89.498 219 21 2 2 219 252509873 252510090 5.470000e-70 276.0
18 TraesCS3A01G213000 chr1D 87.611 226 22 6 6 229 6716092 6715871 1.980000e-64 257.0
19 TraesCS3A01G213000 chr5A 88.210 229 21 6 2 229 367145047 367144824 9.160000e-68 268.0
20 TraesCS3A01G213000 chr1A 88.182 220 22 4 2 220 323288534 323288750 5.510000e-65 259.0
21 TraesCS3A01G213000 chr1A 93.878 49 3 0 3217 3265 586636274 586636322 2.140000e-09 75.0
22 TraesCS3A01G213000 chr1B 86.730 211 24 3 6 215 8857278 8857071 1.200000e-56 231.0
23 TraesCS3A01G213000 chr1B 95.000 40 1 1 628 667 343665349 343665311 1.670000e-05 62.1
24 TraesCS3A01G213000 chr1B 94.872 39 1 1 629 667 196144404 196144441 6.000000e-05 60.2
25 TraesCS3A01G213000 chr4B 87.692 195 20 3 25 218 440567911 440567720 2.010000e-54 224.0
26 TraesCS3A01G213000 chr4B 93.182 44 3 0 2161 2204 89007803 89007760 1.290000e-06 65.8
27 TraesCS3A01G213000 chr6A 80.973 226 36 7 6 229 19863512 19863732 7.390000e-39 172.0
28 TraesCS3A01G213000 chr6A 94.872 39 2 0 629 667 456781877 456781915 1.670000e-05 62.1
29 TraesCS3A01G213000 chr2B 89.362 94 7 2 2897 2989 745678111 745678020 1.260000e-21 115.0
30 TraesCS3A01G213000 chr2B 92.857 56 4 0 5393 5448 520208643 520208588 1.280000e-11 82.4
31 TraesCS3A01G213000 chr2B 90.164 61 6 0 5393 5453 624544434 624544494 4.610000e-11 80.5
32 TraesCS3A01G213000 chr7A 89.231 65 5 2 5393 5457 608491931 608491993 4.610000e-11 80.5
33 TraesCS3A01G213000 chr7B 100.000 40 0 0 628 667 683166852 683166891 2.140000e-09 75.0
34 TraesCS3A01G213000 chr7B 94.872 39 2 0 629 667 701637086 701637048 1.670000e-05 62.1
35 TraesCS3A01G213000 chr7B 97.059 34 1 0 2161 2194 245596429 245596462 2.160000e-04 58.4
36 TraesCS3A01G213000 chr4A 97.561 41 0 1 628 668 143238943 143238904 9.970000e-08 69.4
37 TraesCS3A01G213000 chr7D 95.000 40 0 1 628 667 235530993 235530956 1.670000e-05 62.1
38 TraesCS3A01G213000 chr2A 92.857 42 3 0 626 667 43462448 43462489 1.670000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G213000 chr3A 384309977 384315522 5545 False 10242.000000 10242 100.000000 1 5546 1 chr3A.!!$F1 5545
1 TraesCS3A01G213000 chr3D 291757244 291761797 4553 False 3343.000000 4026 93.806500 713 5196 2 chr3D.!!$F3 4483
2 TraesCS3A01G213000 chr3B 384885251 384890186 4935 False 2419.666667 3932 93.803667 713 5546 3 chr3B.!!$F2 4833

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
265 266 0.031716 TAGGGCATCTCCAGAGTGCT 60.032 55.000 16.39 6.02 36.45 4.40 F
296 297 0.032952 TTCGACACCGACCCTTCAAG 59.967 55.000 0.00 0.00 45.50 3.02 F
299 300 0.037232 GACACCGACCCTTCAAGGAG 60.037 60.000 4.43 0.00 37.67 3.69 F
545 546 0.108329 AAGTGGCCGACGGTATGAAG 60.108 55.000 16.73 0.00 0.00 3.02 F
549 550 0.318784 GGCCGACGGTATGAAGCTAG 60.319 60.000 16.73 0.00 0.00 3.42 F
550 551 0.318784 GCCGACGGTATGAAGCTAGG 60.319 60.000 16.73 0.00 0.00 3.02 F
558 559 0.750850 TATGAAGCTAGGTGGACGCC 59.249 55.000 0.00 0.00 0.00 5.68 F
773 774 0.967887 CCCACGCTCCAGAGAGAGAA 60.968 60.000 5.36 0.00 42.08 2.87 F
1257 1264 1.004745 ACTGCTCATTCCCATTTCCGT 59.995 47.619 0.00 0.00 0.00 4.69 F
2219 2230 1.142474 CCACCGAAACAACCGAGTAC 58.858 55.000 0.00 0.00 0.00 2.73 F
3293 3339 0.039798 GGAGCGTCACAACTCGTACA 60.040 55.000 0.00 0.00 33.55 2.90 F
3675 3793 0.247736 GGTGATCGACCACTGCTTCT 59.752 55.000 10.39 0.00 45.34 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1221 1228 0.606604 CAGTGCTGTTACCGTACCCT 59.393 55.000 0.00 0.00 0.00 4.34 R
2165 2176 0.758734 AAGTGGGGCAAAAGCCTTTC 59.241 50.000 6.45 0.00 0.00 2.62 R
2219 2230 1.608109 TGTGTTTGCTGCTACCATGTG 59.392 47.619 0.00 0.00 0.00 3.21 R
2229 2240 2.360553 TGGTGTTGTTGTGTTTGCTG 57.639 45.000 0.00 0.00 0.00 4.41 R
2373 2384 2.588620 TCGGTAGCATGGTTTTGGTTT 58.411 42.857 1.12 0.00 0.00 3.27 R
2521 2535 4.100808 AGCATGGAAGCAAAGTTAAAACCA 59.899 37.500 0.00 0.00 36.85 3.67 R
2608 2622 1.227380 GATGTAGAGGGTGGCTGCG 60.227 63.158 0.00 0.00 0.00 5.18 R
2638 2652 7.385267 GCCATCCACCATAAATAATGCAAATA 58.615 34.615 0.00 0.00 33.92 1.40 R
3274 3320 0.039798 TGTACGAGTTGTGACGCTCC 60.040 55.000 0.00 0.00 0.00 4.70 R
3557 3672 0.746063 TTGGTCCAAGTTGCAGCAAG 59.254 50.000 8.49 0.00 0.00 4.01 R
4119 4240 1.851304 TTTGGCCTGGAAGCTTATGG 58.149 50.000 3.32 3.05 0.00 2.74 R
5419 5580 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 9.790344 AATGAGATTAATAGGAGGTCTCAAATG 57.210 33.333 7.37 0.00 45.71 2.32
47 48 8.324191 TGAGATTAATAGGAGGTCTCAAATGT 57.676 34.615 1.25 0.00 41.48 2.71
48 49 8.772250 TGAGATTAATAGGAGGTCTCAAATGTT 58.228 33.333 1.25 0.00 41.48 2.71
49 50 9.620259 GAGATTAATAGGAGGTCTCAAATGTTT 57.380 33.333 0.14 0.00 36.28 2.83
55 56 9.533831 AATAGGAGGTCTCAAATGTTTAATTGT 57.466 29.630 0.14 0.00 0.00 2.71
57 58 8.336801 AGGAGGTCTCAAATGTTTAATTGTAC 57.663 34.615 0.14 0.00 0.00 2.90
58 59 8.164070 AGGAGGTCTCAAATGTTTAATTGTACT 58.836 33.333 0.00 0.00 0.00 2.73
59 60 8.793592 GGAGGTCTCAAATGTTTAATTGTACTT 58.206 33.333 0.00 0.00 0.00 2.24
79 80 3.982576 TTTTTCCTTTGAAGGTCGAGC 57.017 42.857 6.48 6.48 46.54 5.03
80 81 2.930826 TTTCCTTTGAAGGTCGAGCT 57.069 45.000 12.24 12.24 46.54 4.09
81 82 2.169832 TTCCTTTGAAGGTCGAGCTG 57.830 50.000 19.39 4.84 46.54 4.24
82 83 0.320771 TCCTTTGAAGGTCGAGCTGC 60.321 55.000 19.39 17.63 46.54 5.25
83 84 0.321122 CCTTTGAAGGTCGAGCTGCT 60.321 55.000 22.74 0.00 41.41 4.24
84 85 1.066858 CCTTTGAAGGTCGAGCTGCTA 60.067 52.381 22.74 13.32 41.41 3.49
85 86 2.612972 CCTTTGAAGGTCGAGCTGCTAA 60.613 50.000 22.74 19.59 41.41 3.09
86 87 3.265791 CTTTGAAGGTCGAGCTGCTAAT 58.734 45.455 22.74 4.73 0.00 1.73
87 88 4.433615 CTTTGAAGGTCGAGCTGCTAATA 58.566 43.478 22.74 0.00 0.00 0.98
88 89 3.717400 TGAAGGTCGAGCTGCTAATAG 57.283 47.619 22.74 0.00 0.00 1.73
89 90 2.223829 TGAAGGTCGAGCTGCTAATAGC 60.224 50.000 22.74 5.12 44.01 2.97
90 91 0.312416 AGGTCGAGCTGCTAATAGCG 59.688 55.000 17.85 1.11 46.26 4.26
91 92 0.311165 GGTCGAGCTGCTAATAGCGA 59.689 55.000 7.51 3.97 46.26 4.93
92 93 1.068194 GGTCGAGCTGCTAATAGCGAT 60.068 52.381 12.50 1.27 46.26 4.58
93 94 1.982223 GTCGAGCTGCTAATAGCGATG 59.018 52.381 12.50 1.94 46.26 3.84
94 95 0.712775 CGAGCTGCTAATAGCGATGC 59.287 55.000 0.15 11.39 46.26 3.91
95 96 1.074752 GAGCTGCTAATAGCGATGCC 58.925 55.000 16.62 8.36 46.26 4.40
96 97 0.668706 AGCTGCTAATAGCGATGCCG 60.669 55.000 16.62 0.00 46.26 5.69
97 98 0.667487 GCTGCTAATAGCGATGCCGA 60.667 55.000 7.84 0.00 46.26 5.54
98 99 2.001812 CTGCTAATAGCGATGCCGAT 57.998 50.000 7.84 0.00 46.26 4.18
99 100 2.735444 GCTGCTAATAGCGATGCCGATA 60.735 50.000 7.84 0.00 46.26 2.92
100 101 3.111838 CTGCTAATAGCGATGCCGATAG 58.888 50.000 7.84 0.00 46.26 2.08
116 117 4.386867 CGATAGGTTAGCCAAGTTCTCA 57.613 45.455 0.00 0.00 37.19 3.27
117 118 4.113354 CGATAGGTTAGCCAAGTTCTCAC 58.887 47.826 0.00 0.00 37.19 3.51
118 119 4.381612 CGATAGGTTAGCCAAGTTCTCACA 60.382 45.833 0.00 0.00 37.19 3.58
119 120 5.675538 GATAGGTTAGCCAAGTTCTCACAT 58.324 41.667 0.00 0.00 37.19 3.21
120 121 4.373156 AGGTTAGCCAAGTTCTCACATT 57.627 40.909 0.00 0.00 37.19 2.71
121 122 4.327680 AGGTTAGCCAAGTTCTCACATTC 58.672 43.478 0.00 0.00 37.19 2.67
122 123 4.042187 AGGTTAGCCAAGTTCTCACATTCT 59.958 41.667 0.00 0.00 37.19 2.40
123 124 4.393371 GGTTAGCCAAGTTCTCACATTCTC 59.607 45.833 0.00 0.00 34.09 2.87
124 125 5.241662 GTTAGCCAAGTTCTCACATTCTCT 58.758 41.667 0.00 0.00 0.00 3.10
125 126 3.936564 AGCCAAGTTCTCACATTCTCTC 58.063 45.455 0.00 0.00 0.00 3.20
126 127 2.670414 GCCAAGTTCTCACATTCTCTCG 59.330 50.000 0.00 0.00 0.00 4.04
127 128 3.615110 GCCAAGTTCTCACATTCTCTCGA 60.615 47.826 0.00 0.00 0.00 4.04
128 129 4.753233 CCAAGTTCTCACATTCTCTCGAT 58.247 43.478 0.00 0.00 0.00 3.59
129 130 4.803088 CCAAGTTCTCACATTCTCTCGATC 59.197 45.833 0.00 0.00 0.00 3.69
130 131 5.405797 CAAGTTCTCACATTCTCTCGATCA 58.594 41.667 0.00 0.00 0.00 2.92
131 132 5.247507 AGTTCTCACATTCTCTCGATCAG 57.752 43.478 0.00 0.00 0.00 2.90
132 133 4.704540 AGTTCTCACATTCTCTCGATCAGT 59.295 41.667 0.00 0.00 0.00 3.41
133 134 4.629251 TCTCACATTCTCTCGATCAGTG 57.371 45.455 0.00 0.00 0.00 3.66
134 135 3.379688 TCTCACATTCTCTCGATCAGTGG 59.620 47.826 0.00 0.00 0.00 4.00
135 136 2.159184 TCACATTCTCTCGATCAGTGGC 60.159 50.000 0.00 0.00 0.00 5.01
136 137 1.202348 ACATTCTCTCGATCAGTGGCG 60.202 52.381 0.00 0.00 0.00 5.69
137 138 1.066152 CATTCTCTCGATCAGTGGCGA 59.934 52.381 8.36 8.36 35.01 5.54
138 139 0.452184 TTCTCTCGATCAGTGGCGAC 59.548 55.000 5.15 0.00 32.51 5.19
139 140 0.676782 TCTCTCGATCAGTGGCGACA 60.677 55.000 0.45 0.00 38.70 4.35
149 150 4.662961 TGGCGACACGTCTGGCTG 62.663 66.667 13.49 0.00 33.40 4.85
151 152 4.664677 GCGACACGTCTGGCTGGT 62.665 66.667 0.00 0.00 0.00 4.00
152 153 2.430921 CGACACGTCTGGCTGGTC 60.431 66.667 0.00 0.00 0.00 4.02
153 154 2.048127 GACACGTCTGGCTGGTCC 60.048 66.667 0.00 0.00 0.00 4.46
154 155 2.842462 ACACGTCTGGCTGGTCCA 60.842 61.111 0.00 0.00 44.18 4.02
155 156 2.377628 GACACGTCTGGCTGGTCCAA 62.378 60.000 0.00 0.00 46.01 3.53
156 157 1.961277 CACGTCTGGCTGGTCCAAC 60.961 63.158 0.00 0.00 46.01 3.77
157 158 2.358737 CGTCTGGCTGGTCCAACC 60.359 66.667 4.15 4.15 46.01 3.77
158 159 2.034221 GTCTGGCTGGTCCAACCC 59.966 66.667 8.90 5.15 46.01 4.11
159 160 3.256960 TCTGGCTGGTCCAACCCC 61.257 66.667 8.90 2.66 46.01 4.95
160 161 3.579302 CTGGCTGGTCCAACCCCA 61.579 66.667 8.90 7.06 46.01 4.96
161 162 2.863484 TGGCTGGTCCAACCCCAT 60.863 61.111 8.90 0.00 43.21 4.00
162 163 2.362889 GGCTGGTCCAACCCCATG 60.363 66.667 0.00 0.00 37.50 3.66
163 164 2.763215 GCTGGTCCAACCCCATGA 59.237 61.111 0.00 0.00 37.50 3.07
164 165 1.307647 GCTGGTCCAACCCCATGAT 59.692 57.895 0.00 0.00 37.50 2.45
165 166 0.753111 GCTGGTCCAACCCCATGATC 60.753 60.000 0.00 0.00 37.50 2.92
166 167 0.106519 CTGGTCCAACCCCATGATCC 60.107 60.000 0.00 0.00 37.50 3.36
167 168 1.230212 GGTCCAACCCCATGATCCC 59.770 63.158 0.00 0.00 30.04 3.85
168 169 1.289244 GGTCCAACCCCATGATCCCT 61.289 60.000 0.00 0.00 30.04 4.20
169 170 0.631212 GTCCAACCCCATGATCCCTT 59.369 55.000 0.00 0.00 0.00 3.95
170 171 1.007118 GTCCAACCCCATGATCCCTTT 59.993 52.381 0.00 0.00 0.00 3.11
171 172 1.721691 TCCAACCCCATGATCCCTTTT 59.278 47.619 0.00 0.00 0.00 2.27
172 173 1.832998 CCAACCCCATGATCCCTTTTG 59.167 52.381 0.00 0.00 0.00 2.44
173 174 2.539302 CAACCCCATGATCCCTTTTGT 58.461 47.619 0.00 0.00 0.00 2.83
174 175 3.565449 CCAACCCCATGATCCCTTTTGTA 60.565 47.826 0.00 0.00 0.00 2.41
175 176 4.289245 CAACCCCATGATCCCTTTTGTAT 58.711 43.478 0.00 0.00 0.00 2.29
176 177 4.184649 ACCCCATGATCCCTTTTGTATC 57.815 45.455 0.00 0.00 0.00 2.24
177 178 3.117131 ACCCCATGATCCCTTTTGTATCC 60.117 47.826 0.00 0.00 0.00 2.59
178 179 3.140895 CCCCATGATCCCTTTTGTATCCT 59.859 47.826 0.00 0.00 0.00 3.24
179 180 4.353788 CCCCATGATCCCTTTTGTATCCTA 59.646 45.833 0.00 0.00 0.00 2.94
180 181 5.316987 CCCATGATCCCTTTTGTATCCTAC 58.683 45.833 0.00 0.00 0.00 3.18
181 182 5.163099 CCCATGATCCCTTTTGTATCCTACA 60.163 44.000 0.00 0.00 36.79 2.74
182 183 6.467775 CCCATGATCCCTTTTGTATCCTACAT 60.468 42.308 0.00 0.00 38.68 2.29
183 184 6.656693 CCATGATCCCTTTTGTATCCTACATC 59.343 42.308 0.00 0.00 38.68 3.06
184 185 6.823286 TGATCCCTTTTGTATCCTACATCA 57.177 37.500 0.00 0.00 38.68 3.07
185 186 7.392766 TGATCCCTTTTGTATCCTACATCAT 57.607 36.000 0.00 0.00 38.68 2.45
186 187 7.226441 TGATCCCTTTTGTATCCTACATCATG 58.774 38.462 0.00 0.00 38.68 3.07
187 188 6.575244 TCCCTTTTGTATCCTACATCATGT 57.425 37.500 0.00 0.00 38.68 3.21
188 189 6.356556 TCCCTTTTGTATCCTACATCATGTG 58.643 40.000 0.00 0.00 38.68 3.21
189 190 5.532406 CCCTTTTGTATCCTACATCATGTGG 59.468 44.000 0.00 0.00 38.68 4.17
190 191 6.356556 CCTTTTGTATCCTACATCATGTGGA 58.643 40.000 1.98 7.04 38.68 4.02
191 192 7.000472 CCTTTTGTATCCTACATCATGTGGAT 59.000 38.462 19.52 19.52 39.66 3.41
192 193 7.503566 CCTTTTGTATCCTACATCATGTGGATT 59.496 37.037 20.34 9.85 38.39 3.01
193 194 8.821686 TTTTGTATCCTACATCATGTGGATTT 57.178 30.769 20.34 7.12 38.39 2.17
194 195 8.821686 TTTGTATCCTACATCATGTGGATTTT 57.178 30.769 20.34 6.59 38.39 1.82
195 196 7.806409 TGTATCCTACATCATGTGGATTTTG 57.194 36.000 20.34 0.00 38.39 2.44
196 197 7.572814 TGTATCCTACATCATGTGGATTTTGA 58.427 34.615 20.34 3.94 38.39 2.69
197 198 7.716560 TGTATCCTACATCATGTGGATTTTGAG 59.283 37.037 20.34 1.08 38.39 3.02
198 199 6.065976 TCCTACATCATGTGGATTTTGAGT 57.934 37.500 1.98 0.00 32.57 3.41
199 200 7.194112 TCCTACATCATGTGGATTTTGAGTA 57.806 36.000 1.98 0.00 32.57 2.59
200 201 7.629157 TCCTACATCATGTGGATTTTGAGTAA 58.371 34.615 1.98 0.00 32.57 2.24
201 202 8.274322 TCCTACATCATGTGGATTTTGAGTAAT 58.726 33.333 1.98 0.00 32.57 1.89
202 203 9.559732 CCTACATCATGTGGATTTTGAGTAATA 57.440 33.333 1.98 0.00 32.57 0.98
226 227 9.762381 ATAAAACTTATGATACCCCTCAAAACA 57.238 29.630 0.00 0.00 0.00 2.83
227 228 8.485578 AAAACTTATGATACCCCTCAAAACAA 57.514 30.769 0.00 0.00 0.00 2.83
228 229 8.485578 AAACTTATGATACCCCTCAAAACAAA 57.514 30.769 0.00 0.00 0.00 2.83
229 230 8.485578 AACTTATGATACCCCTCAAAACAAAA 57.514 30.769 0.00 0.00 0.00 2.44
230 231 8.485578 ACTTATGATACCCCTCAAAACAAAAA 57.514 30.769 0.00 0.00 0.00 1.94
231 232 8.364894 ACTTATGATACCCCTCAAAACAAAAAC 58.635 33.333 0.00 0.00 0.00 2.43
232 233 6.994421 ATGATACCCCTCAAAACAAAAACT 57.006 33.333 0.00 0.00 0.00 2.66
233 234 9.589461 TTATGATACCCCTCAAAACAAAAACTA 57.411 29.630 0.00 0.00 0.00 2.24
234 235 7.279750 TGATACCCCTCAAAACAAAAACTAC 57.720 36.000 0.00 0.00 0.00 2.73
235 236 6.834451 TGATACCCCTCAAAACAAAAACTACA 59.166 34.615 0.00 0.00 0.00 2.74
236 237 7.507616 TGATACCCCTCAAAACAAAAACTACAT 59.492 33.333 0.00 0.00 0.00 2.29
237 238 6.156748 ACCCCTCAAAACAAAAACTACATC 57.843 37.500 0.00 0.00 0.00 3.06
238 239 5.219633 CCCCTCAAAACAAAAACTACATCG 58.780 41.667 0.00 0.00 0.00 3.84
239 240 5.219633 CCCTCAAAACAAAAACTACATCGG 58.780 41.667 0.00 0.00 0.00 4.18
240 241 5.219633 CCTCAAAACAAAAACTACATCGGG 58.780 41.667 0.00 0.00 0.00 5.14
241 242 5.189659 TCAAAACAAAAACTACATCGGGG 57.810 39.130 0.00 0.00 0.00 5.73
242 243 3.653539 AAACAAAAACTACATCGGGGC 57.346 42.857 0.00 0.00 0.00 5.80
243 244 1.161843 ACAAAAACTACATCGGGGCG 58.838 50.000 0.00 0.00 0.00 6.13
244 245 0.179174 CAAAAACTACATCGGGGCGC 60.179 55.000 0.00 0.00 0.00 6.53
245 246 0.322187 AAAAACTACATCGGGGCGCT 60.322 50.000 7.64 0.00 0.00 5.92
246 247 0.322187 AAAACTACATCGGGGCGCTT 60.322 50.000 7.64 0.00 0.00 4.68
247 248 0.538118 AAACTACATCGGGGCGCTTA 59.462 50.000 7.64 0.00 0.00 3.09
248 249 0.104304 AACTACATCGGGGCGCTTAG 59.896 55.000 7.64 0.00 0.00 2.18
249 250 1.006102 CTACATCGGGGCGCTTAGG 60.006 63.158 7.64 0.00 0.00 2.69
250 251 2.436087 CTACATCGGGGCGCTTAGGG 62.436 65.000 7.64 0.00 0.00 3.53
255 256 3.878667 GGGGCGCTTAGGGCATCT 61.879 66.667 22.20 0.00 43.41 2.90
256 257 2.281139 GGGCGCTTAGGGCATCTC 60.281 66.667 22.20 5.25 43.41 2.75
257 258 2.281139 GGCGCTTAGGGCATCTCC 60.281 66.667 22.20 1.28 43.41 3.71
258 259 2.505982 GCGCTTAGGGCATCTCCA 59.494 61.111 16.42 0.00 41.23 3.86
259 260 1.596477 GCGCTTAGGGCATCTCCAG 60.596 63.158 16.42 0.00 41.23 3.86
260 261 2.032860 GCGCTTAGGGCATCTCCAGA 62.033 60.000 16.42 0.00 41.23 3.86
261 262 0.033228 CGCTTAGGGCATCTCCAGAG 59.967 60.000 0.00 0.00 41.91 3.35
262 263 1.127343 GCTTAGGGCATCTCCAGAGT 58.873 55.000 0.00 0.00 41.35 3.24
263 264 1.202627 GCTTAGGGCATCTCCAGAGTG 60.203 57.143 0.00 0.00 41.35 3.51
264 265 0.833287 TTAGGGCATCTCCAGAGTGC 59.167 55.000 11.44 11.44 35.90 4.40
265 266 0.031716 TAGGGCATCTCCAGAGTGCT 60.032 55.000 16.39 6.02 36.45 4.40
266 267 0.031716 AGGGCATCTCCAGAGTGCTA 60.032 55.000 16.39 0.00 36.45 3.49
267 268 0.833287 GGGCATCTCCAGAGTGCTAA 59.167 55.000 16.39 0.00 36.45 3.09
268 269 1.210478 GGGCATCTCCAGAGTGCTAAA 59.790 52.381 16.39 0.00 36.45 1.85
269 270 2.356125 GGGCATCTCCAGAGTGCTAAAA 60.356 50.000 16.39 0.00 36.45 1.52
270 271 3.347216 GGCATCTCCAGAGTGCTAAAAA 58.653 45.455 16.39 0.00 36.45 1.94
288 289 2.681152 AAAGCATTTTCGACACCGAC 57.319 45.000 0.00 0.00 45.50 4.79
289 290 0.872388 AAGCATTTTCGACACCGACC 59.128 50.000 0.00 0.00 45.50 4.79
290 291 0.953960 AGCATTTTCGACACCGACCC 60.954 55.000 0.00 0.00 45.50 4.46
291 292 0.953960 GCATTTTCGACACCGACCCT 60.954 55.000 0.00 0.00 45.50 4.34
292 293 1.519408 CATTTTCGACACCGACCCTT 58.481 50.000 0.00 0.00 45.50 3.95
293 294 1.463444 CATTTTCGACACCGACCCTTC 59.537 52.381 0.00 0.00 45.50 3.46
294 295 0.464870 TTTTCGACACCGACCCTTCA 59.535 50.000 0.00 0.00 45.50 3.02
295 296 0.464870 TTTCGACACCGACCCTTCAA 59.535 50.000 0.00 0.00 45.50 2.69
296 297 0.032952 TTCGACACCGACCCTTCAAG 59.967 55.000 0.00 0.00 45.50 3.02
297 298 1.374252 CGACACCGACCCTTCAAGG 60.374 63.158 0.00 0.00 38.22 3.61
298 299 1.812686 CGACACCGACCCTTCAAGGA 61.813 60.000 4.43 0.00 36.04 3.36
299 300 0.037232 GACACCGACCCTTCAAGGAG 60.037 60.000 4.43 0.00 37.67 3.69
300 301 1.296715 CACCGACCCTTCAAGGAGG 59.703 63.158 4.43 8.01 37.67 4.30
301 302 2.269241 CCGACCCTTCAAGGAGGC 59.731 66.667 4.43 0.00 37.67 4.70
302 303 2.125512 CGACCCTTCAAGGAGGCG 60.126 66.667 4.43 5.28 37.67 5.52
303 304 2.436824 GACCCTTCAAGGAGGCGC 60.437 66.667 4.43 0.00 37.67 6.53
304 305 3.978571 GACCCTTCAAGGAGGCGCC 62.979 68.421 21.89 21.89 37.67 6.53
358 359 3.535962 CTCGAGGAGAGCCCCAGC 61.536 72.222 3.91 0.00 40.54 4.85
383 384 4.776322 CCACCGGGCGCTCATCAA 62.776 66.667 8.62 0.00 0.00 2.57
384 385 3.499737 CACCGGGCGCTCATCAAC 61.500 66.667 8.62 0.00 0.00 3.18
387 388 3.853330 CGGGCGCTCATCAACGTG 61.853 66.667 8.62 0.00 0.00 4.49
388 389 2.434185 GGGCGCTCATCAACGTGA 60.434 61.111 7.64 0.00 0.00 4.35
389 390 2.740714 GGGCGCTCATCAACGTGAC 61.741 63.158 7.64 0.00 0.00 3.67
390 391 2.391821 GCGCTCATCAACGTGACG 59.608 61.111 2.24 2.24 0.00 4.35
391 392 3.071459 GCGCTCATCAACGTGACGG 62.071 63.158 10.66 0.00 0.00 4.79
392 393 1.733041 CGCTCATCAACGTGACGGT 60.733 57.895 10.66 0.00 0.00 4.83
393 394 0.455464 CGCTCATCAACGTGACGGTA 60.455 55.000 10.66 0.00 0.00 4.02
394 395 1.269166 GCTCATCAACGTGACGGTAG 58.731 55.000 10.66 0.00 0.00 3.18
395 396 1.269166 CTCATCAACGTGACGGTAGC 58.731 55.000 10.66 0.00 0.00 3.58
396 397 0.108992 TCATCAACGTGACGGTAGCC 60.109 55.000 10.66 0.00 0.00 3.93
425 426 3.476740 GATTGCGGACTGGAATCCA 57.523 52.632 15.67 0.48 46.43 3.41
426 427 1.972872 GATTGCGGACTGGAATCCAT 58.027 50.000 15.67 0.00 46.43 3.41
427 428 1.605710 GATTGCGGACTGGAATCCATG 59.394 52.381 15.67 0.00 46.43 3.66
428 429 0.394216 TTGCGGACTGGAATCCATGG 60.394 55.000 4.97 4.97 38.87 3.66
429 430 1.526917 GCGGACTGGAATCCATGGG 60.527 63.158 13.02 0.00 38.87 4.00
430 431 1.526917 CGGACTGGAATCCATGGGC 60.527 63.158 13.02 0.00 38.87 5.36
431 432 1.526917 GGACTGGAATCCATGGGCG 60.527 63.158 13.02 0.00 38.77 6.13
432 433 1.224592 GACTGGAATCCATGGGCGT 59.775 57.895 13.02 0.00 30.82 5.68
433 434 0.815615 GACTGGAATCCATGGGCGTC 60.816 60.000 13.02 2.41 30.82 5.19
434 435 1.889105 CTGGAATCCATGGGCGTCG 60.889 63.158 13.02 0.00 30.82 5.12
435 436 2.591715 GGAATCCATGGGCGTCGG 60.592 66.667 13.02 0.00 0.00 4.79
436 437 2.591715 GAATCCATGGGCGTCGGG 60.592 66.667 13.02 0.00 0.00 5.14
437 438 4.875713 AATCCATGGGCGTCGGGC 62.876 66.667 13.02 0.00 42.51 6.13
459 460 2.113139 GGGGGAGGTGTGTGTGTG 59.887 66.667 0.00 0.00 0.00 3.82
460 461 2.752807 GGGGGAGGTGTGTGTGTGT 61.753 63.158 0.00 0.00 0.00 3.72
461 462 1.525995 GGGGAGGTGTGTGTGTGTG 60.526 63.158 0.00 0.00 0.00 3.82
462 463 1.223487 GGGAGGTGTGTGTGTGTGT 59.777 57.895 0.00 0.00 0.00 3.72
463 464 1.095228 GGGAGGTGTGTGTGTGTGTG 61.095 60.000 0.00 0.00 0.00 3.82
464 465 1.095228 GGAGGTGTGTGTGTGTGTGG 61.095 60.000 0.00 0.00 0.00 4.17
465 466 1.077787 AGGTGTGTGTGTGTGTGGG 60.078 57.895 0.00 0.00 0.00 4.61
466 467 2.118404 GGTGTGTGTGTGTGTGGGG 61.118 63.158 0.00 0.00 0.00 4.96
467 468 2.118404 GTGTGTGTGTGTGTGGGGG 61.118 63.158 0.00 0.00 0.00 5.40
504 505 4.554163 GGAGTGACCGACGACAAG 57.446 61.111 0.00 0.00 0.00 3.16
505 506 1.080705 GGAGTGACCGACGACAAGG 60.081 63.158 0.00 0.00 0.00 3.61
506 507 1.080705 GAGTGACCGACGACAAGGG 60.081 63.158 0.00 0.00 0.00 3.95
507 508 1.521450 GAGTGACCGACGACAAGGGA 61.521 60.000 0.00 0.00 0.00 4.20
508 509 1.080705 GTGACCGACGACAAGGGAG 60.081 63.158 0.00 0.00 0.00 4.30
509 510 2.273179 TGACCGACGACAAGGGAGG 61.273 63.158 0.00 0.00 0.00 4.30
510 511 2.995574 ACCGACGACAAGGGAGGG 60.996 66.667 0.00 0.00 0.00 4.30
511 512 2.995574 CCGACGACAAGGGAGGGT 60.996 66.667 0.00 0.00 0.00 4.34
512 513 2.261671 CGACGACAAGGGAGGGTG 59.738 66.667 0.00 0.00 0.00 4.61
513 514 2.663196 GACGACAAGGGAGGGTGG 59.337 66.667 0.00 0.00 0.00 4.61
514 515 3.607370 GACGACAAGGGAGGGTGGC 62.607 68.421 0.00 0.00 0.00 5.01
515 516 4.410400 CGACAAGGGAGGGTGGCC 62.410 72.222 0.00 0.00 0.00 5.36
516 517 3.256960 GACAAGGGAGGGTGGCCA 61.257 66.667 0.00 0.00 0.00 5.36
517 518 3.569200 GACAAGGGAGGGTGGCCAC 62.569 68.421 28.57 28.57 0.00 5.01
540 541 3.751246 CCGAAGTGGCCGACGGTA 61.751 66.667 16.73 1.96 40.42 4.02
541 542 2.493030 CGAAGTGGCCGACGGTAT 59.507 61.111 16.73 0.00 0.00 2.73
542 543 1.876714 CGAAGTGGCCGACGGTATG 60.877 63.158 16.73 0.00 0.00 2.39
543 544 1.514087 GAAGTGGCCGACGGTATGA 59.486 57.895 16.73 0.00 0.00 2.15
544 545 0.108520 GAAGTGGCCGACGGTATGAA 60.109 55.000 16.73 0.00 0.00 2.57
545 546 0.108329 AAGTGGCCGACGGTATGAAG 60.108 55.000 16.73 0.00 0.00 3.02
546 547 2.171725 GTGGCCGACGGTATGAAGC 61.172 63.158 16.73 0.00 0.00 3.86
547 548 2.355986 TGGCCGACGGTATGAAGCT 61.356 57.895 16.73 0.00 0.00 3.74
548 549 1.038681 TGGCCGACGGTATGAAGCTA 61.039 55.000 16.73 0.00 0.00 3.32
549 550 0.318784 GGCCGACGGTATGAAGCTAG 60.319 60.000 16.73 0.00 0.00 3.42
550 551 0.318784 GCCGACGGTATGAAGCTAGG 60.319 60.000 16.73 0.00 0.00 3.02
551 552 1.030457 CCGACGGTATGAAGCTAGGT 58.970 55.000 5.48 0.00 0.00 3.08
552 553 1.269102 CCGACGGTATGAAGCTAGGTG 60.269 57.143 5.48 0.00 0.00 4.00
553 554 1.269102 CGACGGTATGAAGCTAGGTGG 60.269 57.143 0.00 0.00 0.00 4.61
554 555 2.029623 GACGGTATGAAGCTAGGTGGA 58.970 52.381 0.00 0.00 0.00 4.02
555 556 1.755380 ACGGTATGAAGCTAGGTGGAC 59.245 52.381 0.00 0.00 0.00 4.02
556 557 1.269102 CGGTATGAAGCTAGGTGGACG 60.269 57.143 0.00 0.00 0.00 4.79
557 558 1.538419 GGTATGAAGCTAGGTGGACGC 60.538 57.143 0.00 0.00 0.00 5.19
558 559 0.750850 TATGAAGCTAGGTGGACGCC 59.249 55.000 0.00 0.00 0.00 5.68
559 560 2.202756 GAAGCTAGGTGGACGCCG 60.203 66.667 0.00 0.00 0.00 6.46
560 561 4.452733 AAGCTAGGTGGACGCCGC 62.453 66.667 0.00 1.37 0.00 6.53
603 604 3.292656 CGAGGAGCAAGAGGAGCA 58.707 61.111 0.00 0.00 0.00 4.26
604 605 1.153667 CGAGGAGCAAGAGGAGCAC 60.154 63.158 0.00 0.00 0.00 4.40
605 606 1.220477 GAGGAGCAAGAGGAGCACC 59.780 63.158 0.00 0.00 42.18 5.01
606 607 2.125350 GGAGCAAGAGGAGCACCG 60.125 66.667 0.00 0.00 41.83 4.94
607 608 2.125350 GAGCAAGAGGAGCACCGG 60.125 66.667 0.00 0.00 41.83 5.28
608 609 2.925170 AGCAAGAGGAGCACCGGT 60.925 61.111 0.00 0.00 41.83 5.28
609 610 2.743928 GCAAGAGGAGCACCGGTG 60.744 66.667 30.66 30.66 41.83 4.94
610 611 2.046892 CAAGAGGAGCACCGGTGG 60.047 66.667 34.58 17.30 41.83 4.61
611 612 2.526873 AAGAGGAGCACCGGTGGT 60.527 61.111 37.80 37.80 44.89 4.16
630 631 4.107051 GCCGTCGCTGCTGCATTT 62.107 61.111 16.29 0.00 39.64 2.32
631 632 2.562912 CCGTCGCTGCTGCATTTT 59.437 55.556 16.29 0.00 39.64 1.82
632 633 1.081242 CCGTCGCTGCTGCATTTTT 60.081 52.632 16.29 0.00 39.64 1.94
659 660 9.770097 TTAAAATTGTTTGGATTGCTTATCACA 57.230 25.926 2.57 0.00 34.77 3.58
660 661 8.851541 AAAATTGTTTGGATTGCTTATCACAT 57.148 26.923 2.57 0.00 34.77 3.21
661 662 7.837202 AATTGTTTGGATTGCTTATCACATG 57.163 32.000 0.00 0.00 34.77 3.21
662 663 5.981088 TGTTTGGATTGCTTATCACATGT 57.019 34.783 0.00 0.00 34.77 3.21
663 664 5.712004 TGTTTGGATTGCTTATCACATGTG 58.288 37.500 20.18 20.18 34.77 3.21
664 665 5.243507 TGTTTGGATTGCTTATCACATGTGT 59.756 36.000 24.63 14.61 34.77 3.72
665 666 5.565592 TTGGATTGCTTATCACATGTGTC 57.434 39.130 24.63 12.27 34.77 3.67
666 667 4.587891 TGGATTGCTTATCACATGTGTCA 58.412 39.130 24.63 11.42 34.77 3.58
667 668 5.195185 TGGATTGCTTATCACATGTGTCAT 58.805 37.500 24.63 14.56 34.77 3.06
668 669 5.653330 TGGATTGCTTATCACATGTGTCATT 59.347 36.000 24.63 11.23 34.77 2.57
669 670 6.827762 TGGATTGCTTATCACATGTGTCATTA 59.172 34.615 24.63 6.18 34.77 1.90
670 671 7.134815 GGATTGCTTATCACATGTGTCATTAC 58.865 38.462 24.63 12.00 34.77 1.89
671 672 7.012704 GGATTGCTTATCACATGTGTCATTACT 59.987 37.037 24.63 5.86 34.77 2.24
672 673 6.908870 TGCTTATCACATGTGTCATTACTC 57.091 37.500 24.63 8.86 0.00 2.59
673 674 6.643388 TGCTTATCACATGTGTCATTACTCT 58.357 36.000 24.63 3.53 0.00 3.24
674 675 7.105588 TGCTTATCACATGTGTCATTACTCTT 58.894 34.615 24.63 2.32 0.00 2.85
675 676 7.607607 TGCTTATCACATGTGTCATTACTCTTT 59.392 33.333 24.63 0.00 0.00 2.52
676 677 8.454106 GCTTATCACATGTGTCATTACTCTTTT 58.546 33.333 24.63 0.00 0.00 2.27
677 678 9.764870 CTTATCACATGTGTCATTACTCTTTTG 57.235 33.333 24.63 0.00 0.00 2.44
678 679 6.000891 TCACATGTGTCATTACTCTTTTGC 57.999 37.500 24.63 0.00 0.00 3.68
679 680 5.530543 TCACATGTGTCATTACTCTTTTGCA 59.469 36.000 24.63 0.00 0.00 4.08
680 681 6.207221 TCACATGTGTCATTACTCTTTTGCAT 59.793 34.615 24.63 0.00 0.00 3.96
681 682 6.864685 CACATGTGTCATTACTCTTTTGCATT 59.135 34.615 18.03 0.00 0.00 3.56
682 683 8.022550 CACATGTGTCATTACTCTTTTGCATTA 58.977 33.333 18.03 0.00 0.00 1.90
683 684 8.575589 ACATGTGTCATTACTCTTTTGCATTAA 58.424 29.630 0.00 0.00 0.00 1.40
684 685 8.853345 CATGTGTCATTACTCTTTTGCATTAAC 58.147 33.333 0.00 0.00 0.00 2.01
685 686 7.367285 TGTGTCATTACTCTTTTGCATTAACC 58.633 34.615 0.00 0.00 0.00 2.85
686 687 6.523201 GTGTCATTACTCTTTTGCATTAACCG 59.477 38.462 0.00 0.00 0.00 4.44
687 688 6.428465 TGTCATTACTCTTTTGCATTAACCGA 59.572 34.615 0.00 0.00 0.00 4.69
688 689 7.120579 TGTCATTACTCTTTTGCATTAACCGAT 59.879 33.333 0.00 0.00 0.00 4.18
689 690 7.640240 GTCATTACTCTTTTGCATTAACCGATC 59.360 37.037 0.00 0.00 0.00 3.69
690 691 7.552687 TCATTACTCTTTTGCATTAACCGATCT 59.447 33.333 0.00 0.00 0.00 2.75
691 692 7.681939 TTACTCTTTTGCATTAACCGATCTT 57.318 32.000 0.00 0.00 0.00 2.40
692 693 8.780846 TTACTCTTTTGCATTAACCGATCTTA 57.219 30.769 0.00 0.00 0.00 2.10
693 694 7.073342 ACTCTTTTGCATTAACCGATCTTAC 57.927 36.000 0.00 0.00 0.00 2.34
694 695 6.879458 ACTCTTTTGCATTAACCGATCTTACT 59.121 34.615 0.00 0.00 0.00 2.24
695 696 8.038944 ACTCTTTTGCATTAACCGATCTTACTA 58.961 33.333 0.00 0.00 0.00 1.82
696 697 8.780846 TCTTTTGCATTAACCGATCTTACTAA 57.219 30.769 0.00 0.00 0.00 2.24
697 698 9.391006 TCTTTTGCATTAACCGATCTTACTAAT 57.609 29.630 0.00 0.00 0.00 1.73
698 699 9.651718 CTTTTGCATTAACCGATCTTACTAATC 57.348 33.333 0.00 0.00 0.00 1.75
699 700 8.725405 TTTGCATTAACCGATCTTACTAATCA 57.275 30.769 0.00 0.00 0.00 2.57
700 701 8.902540 TTGCATTAACCGATCTTACTAATCAT 57.097 30.769 0.00 0.00 0.00 2.45
701 702 8.310406 TGCATTAACCGATCTTACTAATCATG 57.690 34.615 0.00 0.00 0.00 3.07
702 703 7.931407 TGCATTAACCGATCTTACTAATCATGT 59.069 33.333 0.00 0.00 0.00 3.21
703 704 8.774586 GCATTAACCGATCTTACTAATCATGTT 58.225 33.333 0.00 0.00 0.00 2.71
707 708 7.948278 ACCGATCTTACTAATCATGTTTAGC 57.052 36.000 19.16 5.43 33.34 3.09
708 709 7.497595 ACCGATCTTACTAATCATGTTTAGCA 58.502 34.615 19.16 7.67 33.34 3.49
709 710 7.438459 ACCGATCTTACTAATCATGTTTAGCAC 59.562 37.037 19.16 7.39 33.34 4.40
710 711 7.438160 CCGATCTTACTAATCATGTTTAGCACA 59.562 37.037 19.16 6.33 40.71 4.57
773 774 0.967887 CCCACGCTCCAGAGAGAGAA 60.968 60.000 5.36 0.00 42.08 2.87
844 851 1.376942 CCTGTTCCAGCAGCAGAGG 60.377 63.158 0.00 0.00 35.28 3.69
1152 1159 3.056465 CGCTCCTCTACCTCTTTGACTTT 60.056 47.826 0.00 0.00 0.00 2.66
1158 1165 2.736670 ACCTCTTTGACTTTGCCACT 57.263 45.000 0.00 0.00 0.00 4.00
1253 1260 1.822990 CAGCACTGCTCATTCCCATTT 59.177 47.619 0.00 0.00 36.40 2.32
1254 1261 2.097825 AGCACTGCTCATTCCCATTTC 58.902 47.619 0.00 0.00 30.62 2.17
1255 1262 1.135721 GCACTGCTCATTCCCATTTCC 59.864 52.381 0.00 0.00 0.00 3.13
1256 1263 1.402968 CACTGCTCATTCCCATTTCCG 59.597 52.381 0.00 0.00 0.00 4.30
1257 1264 1.004745 ACTGCTCATTCCCATTTCCGT 59.995 47.619 0.00 0.00 0.00 4.69
1258 1265 2.094675 CTGCTCATTCCCATTTCCGTT 58.905 47.619 0.00 0.00 0.00 4.44
1259 1266 2.091541 TGCTCATTCCCATTTCCGTTC 58.908 47.619 0.00 0.00 0.00 3.95
1260 1267 1.405463 GCTCATTCCCATTTCCGTTCC 59.595 52.381 0.00 0.00 0.00 3.62
1261 1268 2.945890 GCTCATTCCCATTTCCGTTCCT 60.946 50.000 0.00 0.00 0.00 3.36
1262 1269 2.945668 CTCATTCCCATTTCCGTTCCTC 59.054 50.000 0.00 0.00 0.00 3.71
1263 1270 2.024414 CATTCCCATTTCCGTTCCTCC 58.976 52.381 0.00 0.00 0.00 4.30
1264 1271 1.368374 TTCCCATTTCCGTTCCTCCT 58.632 50.000 0.00 0.00 0.00 3.69
1265 1272 1.368374 TCCCATTTCCGTTCCTCCTT 58.632 50.000 0.00 0.00 0.00 3.36
1316 1323 1.835494 AGCTACGACCTGCTTCTACA 58.165 50.000 0.00 0.00 35.86 2.74
1395 1402 1.462432 TGGACCCCTGCACTTGGTA 60.462 57.895 0.00 0.00 30.97 3.25
1400 1407 1.350019 ACCCCTGCACTTGGTAGTAAC 59.650 52.381 0.00 0.00 31.96 2.50
1439 1449 3.194755 TGTAGGTGCTAATTGCTTCGAGA 59.805 43.478 0.00 0.00 43.37 4.04
1549 1560 6.827727 TCTTCAACCAGTAGTTAAGCTTCTT 58.172 36.000 0.00 0.00 36.18 2.52
1684 1695 5.538118 CATTGTGATATCGGCTTACCAGTA 58.462 41.667 0.00 0.00 34.57 2.74
1755 1766 6.071616 GGAAACCTTGTTCTTGTTGCCATATA 60.072 38.462 0.00 0.00 37.59 0.86
1756 1767 6.515272 AACCTTGTTCTTGTTGCCATATAG 57.485 37.500 0.00 0.00 0.00 1.31
1765 1776 8.783093 GTTCTTGTTGCCATATAGTATTGCATA 58.217 33.333 0.00 0.00 0.00 3.14
1799 1810 4.210331 CCCAATTATGACTGGAAGGAAGG 58.790 47.826 0.00 0.00 39.30 3.46
1864 1875 9.565213 GAATTCCAGTTGTAAATCAGAAAGATG 57.435 33.333 0.00 0.00 36.96 2.90
1956 1967 6.671340 TGGAGCCAGATATTCTAATAGCAGAT 59.329 38.462 1.27 0.00 29.96 2.90
1991 2002 3.814504 ATCCACCCCATTCACATATCC 57.185 47.619 0.00 0.00 0.00 2.59
2039 2050 7.117812 GCACTTGCTAAAGTATCTGAACTTACA 59.882 37.037 0.00 3.85 45.07 2.41
2110 2121 7.984050 TGGAAATGAAAATTTTCTGCTAACACA 59.016 29.630 26.73 14.68 38.02 3.72
2165 2176 1.446272 GGCTGAACCTTCGACCGAG 60.446 63.158 0.00 0.00 34.51 4.63
2175 2186 2.143925 CTTCGACCGAGAAAGGCTTTT 58.856 47.619 14.66 4.22 33.69 2.27
2219 2230 1.142474 CCACCGAAACAACCGAGTAC 58.858 55.000 0.00 0.00 0.00 2.73
2229 2240 2.268298 CAACCGAGTACACATGGTAGC 58.732 52.381 0.00 0.00 33.45 3.58
2249 2260 2.891112 CAGCAAACACAACAACACCAT 58.109 42.857 0.00 0.00 0.00 3.55
2251 2262 3.796178 CAGCAAACACAACAACACCATAC 59.204 43.478 0.00 0.00 0.00 2.39
2252 2263 3.445450 AGCAAACACAACAACACCATACA 59.555 39.130 0.00 0.00 0.00 2.29
2254 2265 4.627467 GCAAACACAACAACACCATACAAA 59.373 37.500 0.00 0.00 0.00 2.83
2255 2266 5.220378 GCAAACACAACAACACCATACAAAG 60.220 40.000 0.00 0.00 0.00 2.77
2256 2267 5.906113 AACACAACAACACCATACAAAGA 57.094 34.783 0.00 0.00 0.00 2.52
2257 2268 5.906113 ACACAACAACACCATACAAAGAA 57.094 34.783 0.00 0.00 0.00 2.52
2258 2269 5.890334 ACACAACAACACCATACAAAGAAG 58.110 37.500 0.00 0.00 0.00 2.85
2286 2297 4.854173 TCAAGCAACCATCTAAATAGGCA 58.146 39.130 0.00 0.00 0.00 4.75
2324 2335 6.600822 TCGTAGTAGGTTAGTGTCTAGCATTT 59.399 38.462 0.00 0.00 0.00 2.32
2350 2361 5.409826 GGATTAGACTTCAGTTTCCACACTG 59.590 44.000 0.00 0.00 44.96 3.66
2373 2384 8.418662 ACTGTACTTGTCAACAATAACTACAGA 58.581 33.333 21.78 3.21 35.63 3.41
2404 2415 3.748048 CCATGCTACCGATGATAACTTGG 59.252 47.826 0.00 0.00 0.00 3.61
2424 2435 5.148651 TGGTAAGCCTTCACTAAGAACTC 57.851 43.478 0.00 0.00 34.37 3.01
2456 2468 4.084011 AGCTATGAAGAGAATGGGCTTC 57.916 45.455 0.00 0.00 40.62 3.86
2488 2502 8.807948 TGCTTTAGCCTTTTCAGTTATCTAAT 57.192 30.769 0.00 0.00 41.18 1.73
2633 2647 2.289945 GCCACCCTCTACATCATCCATC 60.290 54.545 0.00 0.00 0.00 3.51
2638 2652 4.723789 ACCCTCTACATCATCCATCTGTTT 59.276 41.667 0.00 0.00 0.00 2.83
2716 2730 2.697229 TGTTGGTTTGGCAATCATGTCA 59.303 40.909 0.00 1.41 40.01 3.58
2812 2826 9.219603 CAACTCTGTCCTAATGAATTTGTCTTA 57.780 33.333 0.00 0.00 0.00 2.10
2904 2918 4.946478 AGCCCTCTTACAGTATGCTTAG 57.054 45.455 0.00 0.00 42.53 2.18
2906 2920 3.643763 CCCTCTTACAGTATGCTTAGCG 58.356 50.000 0.00 0.00 42.53 4.26
2925 2939 4.826556 AGCGAAGAGTCTCATTTAAGCTT 58.173 39.130 3.48 3.48 0.00 3.74
3012 3027 9.487790 CACATTAAATTGTTTGGATTAGTTGGT 57.512 29.630 0.00 0.00 0.00 3.67
3017 3032 8.831715 AAATTGTTTGGATTAGTTGGTGATTC 57.168 30.769 0.00 0.00 0.00 2.52
3119 3134 4.074970 TCCTTTTTAGGCTTGAAGCTCAG 58.925 43.478 17.59 4.35 41.99 3.35
3124 3139 7.011857 CCTTTTTAGGCTTGAAGCTCAGTATAG 59.988 40.741 17.59 6.85 41.99 1.31
3202 3217 3.134458 GCTGTTCTTGTGCTGTCTACTT 58.866 45.455 0.00 0.00 0.00 2.24
3239 3254 7.611770 AGTAAGTTTGAGCACATATAGACACA 58.388 34.615 0.00 0.00 0.00 3.72
3240 3255 6.727824 AAGTTTGAGCACATATAGACACAC 57.272 37.500 0.00 0.00 0.00 3.82
3241 3256 5.793817 AGTTTGAGCACATATAGACACACA 58.206 37.500 0.00 0.00 0.00 3.72
3274 3320 1.108727 TTGTTTGGCAGACAGGGCTG 61.109 55.000 10.93 0.00 38.91 4.85
3289 3335 2.375766 GCTGGAGCGTCACAACTCG 61.376 63.158 0.00 0.00 33.55 4.18
3293 3339 0.039798 GGAGCGTCACAACTCGTACA 60.040 55.000 0.00 0.00 33.55 2.90
3348 3463 6.041523 AGCCAATTGGTGCTAACTAAAAGAAA 59.958 34.615 25.19 0.00 35.69 2.52
3404 3519 8.767085 ACTGTATGCAAACAAATGAAAGAAATG 58.233 29.630 0.00 0.00 0.00 2.32
3427 3542 7.938563 TGAAAATAATTATGCAAATACGGGC 57.061 32.000 0.00 0.00 0.00 6.13
3428 3543 7.492524 TGAAAATAATTATGCAAATACGGGCA 58.507 30.769 0.00 0.00 45.23 5.36
3433 3548 2.696566 TGCAAATACGGGCATACGG 58.303 52.632 0.00 0.00 38.39 4.02
3437 3552 1.796459 CAAATACGGGCATACGGCTAC 59.204 52.381 0.00 0.00 44.01 3.58
3446 3561 3.190535 GGGCATACGGCTACATTTAATGG 59.809 47.826 9.88 0.00 44.01 3.16
3452 3567 7.385752 GCATACGGCTACATTTAATGGTAGTTA 59.614 37.037 9.88 3.79 39.30 2.24
3484 3599 6.956202 AAAATTTCATGTTTCCCAATGCAA 57.044 29.167 0.00 0.00 0.00 4.08
3485 3600 7.527568 AAAATTTCATGTTTCCCAATGCAAT 57.472 28.000 0.00 0.00 0.00 3.56
3509 3624 6.398918 TCTGAGCAGATGGTAAACTTAGTTC 58.601 40.000 0.00 0.00 31.41 3.01
3546 3661 8.958119 ATGCATCAGAATTTTAATCTTTGCAT 57.042 26.923 13.81 13.81 42.68 3.96
3548 3663 9.524106 TGCATCAGAATTTTAATCTTTGCATAG 57.476 29.630 0.00 0.00 38.00 2.23
3598 3716 5.041191 AGTTCTCATTCACTCACTGGTTT 57.959 39.130 0.00 0.00 0.00 3.27
3637 3755 5.993055 TCAGTTCTGGCATCTAATCATGAA 58.007 37.500 0.00 0.00 0.00 2.57
3638 3756 6.417258 TCAGTTCTGGCATCTAATCATGAAA 58.583 36.000 0.00 0.00 0.00 2.69
3640 3758 7.558807 TCAGTTCTGGCATCTAATCATGAAATT 59.441 33.333 0.00 0.00 0.00 1.82
3641 3759 8.195436 CAGTTCTGGCATCTAATCATGAAATTT 58.805 33.333 0.00 0.00 0.00 1.82
3642 3760 9.412460 AGTTCTGGCATCTAATCATGAAATTTA 57.588 29.630 0.00 0.00 0.00 1.40
3643 3761 9.674824 GTTCTGGCATCTAATCATGAAATTTAG 57.325 33.333 0.00 3.81 0.00 1.85
3644 3762 8.985315 TCTGGCATCTAATCATGAAATTTAGT 57.015 30.769 0.00 0.00 0.00 2.24
3657 3775 9.781834 TCATGAAATTTAGTAGCGTTAAAATGG 57.218 29.630 0.00 0.00 0.00 3.16
3661 3779 9.783256 GAAATTTAGTAGCGTTAAAATGGTGAT 57.217 29.630 0.00 0.00 0.00 3.06
3662 3780 9.783256 AAATTTAGTAGCGTTAAAATGGTGATC 57.217 29.630 0.00 0.00 0.00 2.92
3675 3793 0.247736 GGTGATCGACCACTGCTTCT 59.752 55.000 10.39 0.00 45.34 2.85
3754 3873 7.270047 AGTGTTAGTGAGTTTAACTGCTGTTA 58.730 34.615 11.72 11.72 37.59 2.41
3763 3882 9.719355 TGAGTTTAACTGCTGTTATCATAGAAA 57.281 29.630 15.83 5.78 38.31 2.52
3849 3970 3.195182 AGTCCAGCTGATGATATGATCCG 59.805 47.826 17.39 0.00 0.00 4.18
3881 4002 3.493524 GCATTAGGCTTCTACTGAGTCCC 60.494 52.174 0.00 0.00 40.25 4.46
3884 4005 0.896226 GGCTTCTACTGAGTCCCGTT 59.104 55.000 0.00 0.00 0.00 4.44
3931 4052 3.444742 TCTTGCCAAATGAGCACCAATAG 59.555 43.478 0.00 0.00 40.69 1.73
3950 4071 8.962679 ACCAATAGTGTTTGACTAACAGAAAAA 58.037 29.630 2.56 0.00 46.95 1.94
3979 4100 4.236527 AGAACTATTAAGTTGGGCTGGG 57.763 45.455 0.00 0.00 46.09 4.45
4030 4151 3.070015 TGTTCTCACTTCTCAGCATGTGA 59.930 43.478 0.00 0.00 36.74 3.58
4037 4158 2.756840 TCTCAGCATGTGAAGTCAGG 57.243 50.000 0.00 0.00 35.42 3.86
4061 4182 6.127730 GGAAATTTCGAGGGCTCAAAATTAGA 60.128 38.462 11.95 0.00 0.00 2.10
4072 4193 7.038088 AGGGCTCAAAATTAGATTTTCATGGTT 60.038 33.333 0.00 0.00 40.27 3.67
4119 4240 3.686916 AGTTCAGCTCTGTTTAGGGTC 57.313 47.619 0.00 0.00 0.00 4.46
4133 4254 1.216990 AGGGTCCATAAGCTTCCAGG 58.783 55.000 0.00 3.58 0.00 4.45
4166 4287 2.031245 TGGAAACAACTACAAGCATGCG 60.031 45.455 13.01 0.84 37.44 4.73
4167 4288 2.031157 GGAAACAACTACAAGCATGCGT 60.031 45.455 13.01 6.07 0.00 5.24
4220 4341 8.713971 TGAAATAGTATAGGAACATGTGACCAT 58.286 33.333 19.82 14.30 0.00 3.55
4305 4426 5.994668 ACTGACTTCCTTGAGTGAAAAGATC 59.005 40.000 0.00 0.00 0.00 2.75
4308 4431 5.368989 ACTTCCTTGAGTGAAAAGATCGTT 58.631 37.500 0.00 0.00 0.00 3.85
4385 4508 7.211966 AGATTCTTGAACAAGAGAACAATGG 57.788 36.000 15.23 0.00 46.80 3.16
4404 4527 6.127897 ACAATGGCATTGAGAACTTAAGTAGC 60.128 38.462 38.83 4.44 42.83 3.58
4426 4549 3.872560 ACGAACTTTTCTTACTTGGCG 57.127 42.857 0.00 0.00 0.00 5.69
4432 4555 1.519408 TTTCTTACTTGGCGCCACTC 58.481 50.000 32.95 0.07 0.00 3.51
4507 4632 4.258702 TCTTCTCCAGTCACAACTTAGC 57.741 45.455 0.00 0.00 31.71 3.09
4655 4782 0.989164 CTGCGATGCATGCTTTGTTG 59.011 50.000 20.33 9.50 38.13 3.33
4741 4869 6.258354 TCTCTGTAGAACCACCATAGGTAAA 58.742 40.000 0.00 0.00 42.25 2.01
4980 5108 8.870116 TGTACATTGCAGATATCATACCTAGTT 58.130 33.333 5.32 0.00 0.00 2.24
5045 5173 6.127535 CCCACATGACTGCTTAGAAATTCAAT 60.128 38.462 0.00 0.00 0.00 2.57
5073 5201 5.007724 CCTTCACAACGCTTCTTTAAGTTCT 59.992 40.000 0.00 0.00 34.99 3.01
5076 5204 7.173863 TCACAACGCTTCTTTAAGTTCTTAG 57.826 36.000 0.00 0.00 34.99 2.18
5194 5323 7.559897 TGTATTTTTCTTTTCTTGGAGAGGTGT 59.440 33.333 0.00 0.00 0.00 4.16
5333 5462 3.018856 TGCACAATATCAAGAGGGCAAG 58.981 45.455 0.00 0.00 0.00 4.01
5338 5467 5.525378 CACAATATCAAGAGGGCAAGTACTC 59.475 44.000 0.00 0.00 0.00 2.59
5348 5477 1.659098 GGCAAGTACTCGATTTCCGTG 59.341 52.381 0.00 0.00 39.75 4.94
5361 5490 4.436523 CGATTTCCGTGAAACAACTGAAAC 59.563 41.667 1.85 0.00 36.51 2.78
5366 5495 5.120399 TCCGTGAAACAACTGAAACATACT 58.880 37.500 0.00 0.00 35.74 2.12
5389 5518 8.779354 ACTCTCTTTGTCCATAAATACTTGTC 57.221 34.615 0.00 0.00 0.00 3.18
5391 5520 7.383687 TCTCTTTGTCCATAAATACTTGTCGT 58.616 34.615 0.00 0.00 0.00 4.34
5392 5521 7.876068 TCTCTTTGTCCATAAATACTTGTCGTT 59.124 33.333 0.00 0.00 0.00 3.85
5393 5522 9.146984 CTCTTTGTCCATAAATACTTGTCGTTA 57.853 33.333 0.00 0.00 0.00 3.18
5394 5523 9.146984 TCTTTGTCCATAAATACTTGTCGTTAG 57.853 33.333 0.00 0.00 0.00 2.34
5396 5525 9.661563 TTTGTCCATAAATACTTGTCGTTAGAT 57.338 29.630 0.00 0.00 0.00 1.98
5433 5594 4.099573 TCCATCTCTCCGACAAGTATTTCC 59.900 45.833 0.00 0.00 0.00 3.13
5434 5595 3.777465 TCTCTCCGACAAGTATTTCCG 57.223 47.619 0.00 0.00 0.00 4.30
5460 5621 7.757624 GGACGGAGAGAGTATGATTGATTATTC 59.242 40.741 0.00 0.00 0.00 1.75
5462 5623 8.865090 ACGGAGAGAGTATGATTGATTATTCTT 58.135 33.333 0.00 0.00 0.00 2.52
5484 5645 8.732746 TCTTTTACAAGCTAAGGAATATCCAC 57.267 34.615 0.00 0.00 39.61 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 9.790344 CATTTGAGACCTCCTATTAATCTCATT 57.210 33.333 3.28 0.00 43.88 2.57
21 22 8.943085 ACATTTGAGACCTCCTATTAATCTCAT 58.057 33.333 3.28 0.00 43.88 2.90
22 23 8.324191 ACATTTGAGACCTCCTATTAATCTCA 57.676 34.615 0.00 0.00 43.04 3.27
23 24 9.620259 AAACATTTGAGACCTCCTATTAATCTC 57.380 33.333 0.00 0.00 37.02 2.75
29 30 9.533831 ACAATTAAACATTTGAGACCTCCTATT 57.466 29.630 0.00 0.00 0.00 1.73
31 32 9.444600 GTACAATTAAACATTTGAGACCTCCTA 57.555 33.333 0.00 0.00 0.00 2.94
32 33 8.164070 AGTACAATTAAACATTTGAGACCTCCT 58.836 33.333 0.00 0.00 0.00 3.69
33 34 8.336801 AGTACAATTAAACATTTGAGACCTCC 57.663 34.615 0.00 0.00 0.00 4.30
65 66 2.370281 TAGCAGCTCGACCTTCAAAG 57.630 50.000 0.00 0.00 0.00 2.77
66 67 2.831685 TTAGCAGCTCGACCTTCAAA 57.168 45.000 0.00 0.00 0.00 2.69
67 68 3.738281 GCTATTAGCAGCTCGACCTTCAA 60.738 47.826 10.83 0.00 41.89 2.69
68 69 2.223829 GCTATTAGCAGCTCGACCTTCA 60.224 50.000 10.83 0.00 41.89 3.02
69 70 2.399448 GCTATTAGCAGCTCGACCTTC 58.601 52.381 10.83 0.00 41.89 3.46
70 71 1.269309 CGCTATTAGCAGCTCGACCTT 60.269 52.381 15.64 0.00 42.58 3.50
71 72 0.312416 CGCTATTAGCAGCTCGACCT 59.688 55.000 15.64 0.00 42.58 3.85
72 73 0.311165 TCGCTATTAGCAGCTCGACC 59.689 55.000 15.64 0.00 42.58 4.79
73 74 1.982223 CATCGCTATTAGCAGCTCGAC 59.018 52.381 15.64 0.00 42.58 4.20
74 75 1.667177 GCATCGCTATTAGCAGCTCGA 60.667 52.381 15.64 1.01 42.58 4.04
75 76 0.712775 GCATCGCTATTAGCAGCTCG 59.287 55.000 15.64 0.00 42.58 5.03
76 77 1.074752 GGCATCGCTATTAGCAGCTC 58.925 55.000 15.64 6.89 42.58 4.09
77 78 0.668706 CGGCATCGCTATTAGCAGCT 60.669 55.000 15.64 0.00 42.58 4.24
78 79 0.667487 TCGGCATCGCTATTAGCAGC 60.667 55.000 15.64 14.36 42.58 5.25
79 80 2.001812 ATCGGCATCGCTATTAGCAG 57.998 50.000 15.64 8.48 42.58 4.24
80 81 2.159240 CCTATCGGCATCGCTATTAGCA 60.159 50.000 15.64 3.76 42.58 3.49
81 82 2.159226 ACCTATCGGCATCGCTATTAGC 60.159 50.000 5.56 5.56 38.02 3.09
82 83 3.784701 ACCTATCGGCATCGCTATTAG 57.215 47.619 0.00 0.00 36.13 1.73
83 84 4.439700 GCTAACCTATCGGCATCGCTATTA 60.440 45.833 0.00 0.00 36.13 0.98
84 85 3.676324 GCTAACCTATCGGCATCGCTATT 60.676 47.826 0.00 0.00 36.13 1.73
85 86 2.159226 GCTAACCTATCGGCATCGCTAT 60.159 50.000 0.00 0.00 36.13 2.97
86 87 1.201647 GCTAACCTATCGGCATCGCTA 59.798 52.381 0.00 0.00 36.13 4.26
87 88 0.038159 GCTAACCTATCGGCATCGCT 60.038 55.000 0.00 0.00 36.13 4.93
88 89 1.014564 GGCTAACCTATCGGCATCGC 61.015 60.000 0.00 0.00 36.13 4.58
89 90 0.317160 TGGCTAACCTATCGGCATCG 59.683 55.000 0.00 0.00 36.63 3.84
90 91 2.224305 ACTTGGCTAACCTATCGGCATC 60.224 50.000 0.00 0.00 36.63 3.91
91 92 1.768870 ACTTGGCTAACCTATCGGCAT 59.231 47.619 0.00 0.00 36.63 4.40
92 93 1.200519 ACTTGGCTAACCTATCGGCA 58.799 50.000 0.00 0.00 36.63 5.69
93 94 2.158943 AGAACTTGGCTAACCTATCGGC 60.159 50.000 0.00 0.00 36.63 5.54
94 95 3.132289 TGAGAACTTGGCTAACCTATCGG 59.868 47.826 0.00 0.00 36.63 4.18
95 96 4.113354 GTGAGAACTTGGCTAACCTATCG 58.887 47.826 0.00 0.00 36.63 2.92
96 97 5.086104 TGTGAGAACTTGGCTAACCTATC 57.914 43.478 0.00 0.00 36.63 2.08
97 98 5.700402 ATGTGAGAACTTGGCTAACCTAT 57.300 39.130 0.00 0.00 36.63 2.57
98 99 5.248477 AGAATGTGAGAACTTGGCTAACCTA 59.752 40.000 0.00 0.00 36.63 3.08
99 100 4.042187 AGAATGTGAGAACTTGGCTAACCT 59.958 41.667 0.00 0.00 36.63 3.50
100 101 4.327680 AGAATGTGAGAACTTGGCTAACC 58.672 43.478 0.00 0.00 0.00 2.85
101 102 5.241662 AGAGAATGTGAGAACTTGGCTAAC 58.758 41.667 0.00 0.00 0.00 2.34
102 103 5.482908 GAGAGAATGTGAGAACTTGGCTAA 58.517 41.667 0.00 0.00 0.00 3.09
103 104 4.380973 CGAGAGAATGTGAGAACTTGGCTA 60.381 45.833 0.00 0.00 0.00 3.93
104 105 3.616076 CGAGAGAATGTGAGAACTTGGCT 60.616 47.826 0.00 0.00 0.00 4.75
105 106 2.670414 CGAGAGAATGTGAGAACTTGGC 59.330 50.000 0.00 0.00 0.00 4.52
106 107 4.179926 TCGAGAGAATGTGAGAACTTGG 57.820 45.455 0.00 0.00 37.03 3.61
118 119 5.576921 GTGTCGCCACTGATCGAGAGAAT 62.577 52.174 1.37 0.00 40.39 2.40
119 120 4.332131 GTGTCGCCACTGATCGAGAGAA 62.332 54.545 1.37 0.00 40.39 2.87
120 121 2.873043 GTGTCGCCACTGATCGAGAGA 61.873 57.143 1.37 0.00 40.93 3.10
121 122 0.524392 GTGTCGCCACTGATCGAGAG 60.524 60.000 0.00 0.00 38.61 3.20
122 123 1.506718 GTGTCGCCACTGATCGAGA 59.493 57.895 0.00 0.00 38.61 4.04
123 124 1.869574 CGTGTCGCCACTGATCGAG 60.870 63.158 0.00 0.00 39.55 4.04
124 125 2.178273 CGTGTCGCCACTGATCGA 59.822 61.111 0.00 0.00 39.55 3.59
125 126 2.126463 ACGTGTCGCCACTGATCG 60.126 61.111 0.00 0.00 39.55 3.69
126 127 1.073216 CAGACGTGTCGCCACTGATC 61.073 60.000 0.00 0.00 39.55 2.92
127 128 1.080501 CAGACGTGTCGCCACTGAT 60.081 57.895 0.00 0.00 39.55 2.90
128 129 2.335011 CAGACGTGTCGCCACTGA 59.665 61.111 0.00 0.00 39.55 3.41
129 130 2.734723 CCAGACGTGTCGCCACTG 60.735 66.667 0.00 0.00 39.55 3.66
130 131 4.664677 GCCAGACGTGTCGCCACT 62.665 66.667 0.00 0.00 39.55 4.00
131 132 4.664677 AGCCAGACGTGTCGCCAC 62.665 66.667 0.00 0.00 38.27 5.01
132 133 4.662961 CAGCCAGACGTGTCGCCA 62.663 66.667 0.00 0.00 34.09 5.69
134 135 4.664677 ACCAGCCAGACGTGTCGC 62.665 66.667 0.00 0.00 34.09 5.19
135 136 2.430921 GACCAGCCAGACGTGTCG 60.431 66.667 0.00 0.00 34.09 4.35
136 137 2.048127 GGACCAGCCAGACGTGTC 60.048 66.667 0.00 0.00 36.34 3.67
137 138 2.842462 TGGACCAGCCAGACGTGT 60.842 61.111 0.00 0.00 43.33 4.49
145 146 2.228841 ATCATGGGGTTGGACCAGCC 62.229 60.000 18.77 18.77 42.15 4.85
146 147 0.753111 GATCATGGGGTTGGACCAGC 60.753 60.000 0.00 0.00 42.15 4.85
147 148 0.106519 GGATCATGGGGTTGGACCAG 60.107 60.000 0.00 0.00 42.15 4.00
148 149 1.580066 GGGATCATGGGGTTGGACCA 61.580 60.000 0.00 0.00 41.02 4.02
149 150 1.230212 GGGATCATGGGGTTGGACC 59.770 63.158 0.00 0.00 37.60 4.46
150 151 0.631212 AAGGGATCATGGGGTTGGAC 59.369 55.000 0.00 0.00 0.00 4.02
151 152 1.392407 AAAGGGATCATGGGGTTGGA 58.608 50.000 0.00 0.00 0.00 3.53
152 153 1.832998 CAAAAGGGATCATGGGGTTGG 59.167 52.381 0.00 0.00 0.00 3.77
153 154 2.539302 ACAAAAGGGATCATGGGGTTG 58.461 47.619 0.00 0.00 0.00 3.77
154 155 4.546674 GATACAAAAGGGATCATGGGGTT 58.453 43.478 0.00 0.00 0.00 4.11
155 156 3.117131 GGATACAAAAGGGATCATGGGGT 60.117 47.826 0.00 0.00 0.00 4.95
156 157 3.140895 AGGATACAAAAGGGATCATGGGG 59.859 47.826 0.00 0.00 41.41 4.96
157 158 4.459852 AGGATACAAAAGGGATCATGGG 57.540 45.455 0.00 0.00 41.41 4.00
172 173 7.716998 ACTCAAAATCCACATGATGTAGGATAC 59.283 37.037 21.49 0.00 43.42 2.24
173 174 7.805163 ACTCAAAATCCACATGATGTAGGATA 58.195 34.615 21.49 10.96 37.32 2.59
174 175 6.666678 ACTCAAAATCCACATGATGTAGGAT 58.333 36.000 17.89 17.89 38.78 3.24
175 176 6.065976 ACTCAAAATCCACATGATGTAGGA 57.934 37.500 15.59 15.59 34.05 2.94
176 177 7.864108 TTACTCAAAATCCACATGATGTAGG 57.136 36.000 0.00 2.75 32.68 3.18
200 201 9.762381 TGTTTTGAGGGGTATCATAAGTTTTAT 57.238 29.630 0.00 0.00 0.00 1.40
201 202 9.589461 TTGTTTTGAGGGGTATCATAAGTTTTA 57.411 29.630 0.00 0.00 0.00 1.52
202 203 8.485578 TTGTTTTGAGGGGTATCATAAGTTTT 57.514 30.769 0.00 0.00 0.00 2.43
203 204 8.485578 TTTGTTTTGAGGGGTATCATAAGTTT 57.514 30.769 0.00 0.00 0.00 2.66
204 205 8.485578 TTTTGTTTTGAGGGGTATCATAAGTT 57.514 30.769 0.00 0.00 0.00 2.66
205 206 8.364894 GTTTTTGTTTTGAGGGGTATCATAAGT 58.635 33.333 0.00 0.00 0.00 2.24
206 207 8.585018 AGTTTTTGTTTTGAGGGGTATCATAAG 58.415 33.333 0.00 0.00 0.00 1.73
207 208 8.485578 AGTTTTTGTTTTGAGGGGTATCATAA 57.514 30.769 0.00 0.00 0.00 1.90
208 209 9.016438 GTAGTTTTTGTTTTGAGGGGTATCATA 57.984 33.333 0.00 0.00 0.00 2.15
209 210 6.994421 AGTTTTTGTTTTGAGGGGTATCAT 57.006 33.333 0.00 0.00 0.00 2.45
210 211 6.834451 TGTAGTTTTTGTTTTGAGGGGTATCA 59.166 34.615 0.00 0.00 0.00 2.15
211 212 7.279750 TGTAGTTTTTGTTTTGAGGGGTATC 57.720 36.000 0.00 0.00 0.00 2.24
212 213 7.308951 CGATGTAGTTTTTGTTTTGAGGGGTAT 60.309 37.037 0.00 0.00 0.00 2.73
213 214 6.016943 CGATGTAGTTTTTGTTTTGAGGGGTA 60.017 38.462 0.00 0.00 0.00 3.69
214 215 5.221165 CGATGTAGTTTTTGTTTTGAGGGGT 60.221 40.000 0.00 0.00 0.00 4.95
215 216 5.219633 CGATGTAGTTTTTGTTTTGAGGGG 58.780 41.667 0.00 0.00 0.00 4.79
216 217 5.219633 CCGATGTAGTTTTTGTTTTGAGGG 58.780 41.667 0.00 0.00 0.00 4.30
217 218 5.219633 CCCGATGTAGTTTTTGTTTTGAGG 58.780 41.667 0.00 0.00 0.00 3.86
218 219 5.219633 CCCCGATGTAGTTTTTGTTTTGAG 58.780 41.667 0.00 0.00 0.00 3.02
219 220 4.500035 GCCCCGATGTAGTTTTTGTTTTGA 60.500 41.667 0.00 0.00 0.00 2.69
220 221 3.738791 GCCCCGATGTAGTTTTTGTTTTG 59.261 43.478 0.00 0.00 0.00 2.44
221 222 3.551250 CGCCCCGATGTAGTTTTTGTTTT 60.551 43.478 0.00 0.00 0.00 2.43
222 223 2.030628 CGCCCCGATGTAGTTTTTGTTT 60.031 45.455 0.00 0.00 0.00 2.83
223 224 1.538075 CGCCCCGATGTAGTTTTTGTT 59.462 47.619 0.00 0.00 0.00 2.83
224 225 1.161843 CGCCCCGATGTAGTTTTTGT 58.838 50.000 0.00 0.00 0.00 2.83
225 226 0.179174 GCGCCCCGATGTAGTTTTTG 60.179 55.000 0.00 0.00 0.00 2.44
226 227 0.322187 AGCGCCCCGATGTAGTTTTT 60.322 50.000 2.29 0.00 0.00 1.94
227 228 0.322187 AAGCGCCCCGATGTAGTTTT 60.322 50.000 2.29 0.00 0.00 2.43
228 229 0.538118 TAAGCGCCCCGATGTAGTTT 59.462 50.000 2.29 0.00 0.00 2.66
229 230 0.104304 CTAAGCGCCCCGATGTAGTT 59.896 55.000 2.29 0.00 0.00 2.24
230 231 1.740285 CTAAGCGCCCCGATGTAGT 59.260 57.895 2.29 0.00 0.00 2.73
231 232 1.006102 CCTAAGCGCCCCGATGTAG 60.006 63.158 2.29 0.00 0.00 2.74
232 233 2.504274 CCCTAAGCGCCCCGATGTA 61.504 63.158 2.29 0.00 0.00 2.29
233 234 3.861797 CCCTAAGCGCCCCGATGT 61.862 66.667 2.29 0.00 0.00 3.06
243 244 1.127343 ACTCTGGAGATGCCCTAAGC 58.873 55.000 4.49 0.00 44.14 3.09
244 245 1.202627 GCACTCTGGAGATGCCCTAAG 60.203 57.143 4.49 0.00 34.97 2.18
245 246 0.833287 GCACTCTGGAGATGCCCTAA 59.167 55.000 4.49 0.00 34.97 2.69
246 247 0.031716 AGCACTCTGGAGATGCCCTA 60.032 55.000 15.79 0.00 36.68 3.53
247 248 0.031716 TAGCACTCTGGAGATGCCCT 60.032 55.000 15.79 6.76 36.68 5.19
248 249 0.833287 TTAGCACTCTGGAGATGCCC 59.167 55.000 15.79 0.00 36.68 5.36
249 250 2.698855 TTTAGCACTCTGGAGATGCC 57.301 50.000 15.79 0.00 36.68 4.40
267 268 3.701532 TCGGTGTCGAAAATGCTTTTT 57.298 38.095 9.85 9.85 43.03 1.94
278 279 1.663739 CTTGAAGGGTCGGTGTCGA 59.336 57.895 0.00 0.00 43.86 4.20
279 280 1.374252 CCTTGAAGGGTCGGTGTCG 60.374 63.158 2.50 0.00 37.82 4.35
280 281 0.037232 CTCCTTGAAGGGTCGGTGTC 60.037 60.000 11.99 0.00 35.59 3.67
281 282 1.481056 CCTCCTTGAAGGGTCGGTGT 61.481 60.000 11.99 0.00 35.59 4.16
282 283 1.296715 CCTCCTTGAAGGGTCGGTG 59.703 63.158 11.99 0.00 35.59 4.94
283 284 2.593956 GCCTCCTTGAAGGGTCGGT 61.594 63.158 11.99 0.00 36.88 4.69
284 285 2.269241 GCCTCCTTGAAGGGTCGG 59.731 66.667 11.99 10.62 36.88 4.79
285 286 2.125512 CGCCTCCTTGAAGGGTCG 60.126 66.667 11.99 8.64 36.88 4.79
286 287 2.436824 GCGCCTCCTTGAAGGGTC 60.437 66.667 11.99 0.01 36.88 4.46
287 288 4.035102 GGCGCCTCCTTGAAGGGT 62.035 66.667 22.15 0.00 36.88 4.34
332 333 3.591835 CTCCTCGAGCTCGGAGGC 61.592 72.222 32.40 4.11 42.46 4.70
333 334 1.891919 CTCTCCTCGAGCTCGGAGG 60.892 68.421 31.86 31.86 45.46 4.30
334 335 3.731136 CTCTCCTCGAGCTCGGAG 58.269 66.667 33.98 29.92 46.52 4.63
341 342 3.535962 GCTGGGGCTCTCCTCGAG 61.536 72.222 5.13 5.13 42.88 4.04
366 367 4.776322 TTGATGAGCGCCCGGTGG 62.776 66.667 2.29 0.00 0.00 4.61
367 368 3.499737 GTTGATGAGCGCCCGGTG 61.500 66.667 2.29 0.00 0.00 4.94
370 371 3.853330 CACGTTGATGAGCGCCCG 61.853 66.667 2.29 0.00 0.00 6.13
371 372 2.434185 TCACGTTGATGAGCGCCC 60.434 61.111 2.29 0.00 0.00 6.13
372 373 2.778679 GTCACGTTGATGAGCGCC 59.221 61.111 2.29 0.00 0.00 6.53
373 374 2.391821 CGTCACGTTGATGAGCGC 59.608 61.111 0.00 0.00 35.46 5.92
374 375 0.455464 TACCGTCACGTTGATGAGCG 60.455 55.000 0.00 0.00 35.46 5.03
375 376 1.269166 CTACCGTCACGTTGATGAGC 58.731 55.000 0.00 0.00 35.46 4.26
376 377 1.269166 GCTACCGTCACGTTGATGAG 58.731 55.000 0.00 2.01 35.46 2.90
377 378 0.108992 GGCTACCGTCACGTTGATGA 60.109 55.000 0.00 0.00 35.46 2.92
378 379 1.410737 CGGCTACCGTCACGTTGATG 61.411 60.000 0.00 0.00 42.73 3.07
379 380 1.153901 CGGCTACCGTCACGTTGAT 60.154 57.895 0.00 0.00 42.73 2.57
380 381 2.256158 CGGCTACCGTCACGTTGA 59.744 61.111 0.00 0.00 42.73 3.18
381 382 2.807895 CCGGCTACCGTCACGTTG 60.808 66.667 5.17 0.00 46.80 4.10
382 383 2.985282 TCCGGCTACCGTCACGTT 60.985 61.111 0.00 0.00 46.80 3.99
383 384 3.437795 CTCCGGCTACCGTCACGT 61.438 66.667 0.00 0.00 46.80 4.49
384 385 4.189188 CCTCCGGCTACCGTCACG 62.189 72.222 0.00 0.00 46.80 4.35
385 386 3.066814 ACCTCCGGCTACCGTCAC 61.067 66.667 0.00 0.00 46.80 3.67
386 387 3.066190 CACCTCCGGCTACCGTCA 61.066 66.667 0.00 0.00 46.80 4.35
387 388 2.753043 TCACCTCCGGCTACCGTC 60.753 66.667 0.00 0.00 46.80 4.79
388 389 3.066814 GTCACCTCCGGCTACCGT 61.067 66.667 0.00 0.00 46.80 4.83
390 391 3.834799 CGGTCACCTCCGGCTACC 61.835 72.222 0.00 0.00 45.88 3.18
406 407 0.461870 TGGATTCCAGTCCGCAATCG 60.462 55.000 0.00 0.00 41.35 3.34
407 408 1.605710 CATGGATTCCAGTCCGCAATC 59.394 52.381 11.78 0.00 41.35 2.67
408 409 1.683943 CATGGATTCCAGTCCGCAAT 58.316 50.000 11.78 0.00 41.35 3.56
409 410 0.394216 CCATGGATTCCAGTCCGCAA 60.394 55.000 5.56 0.00 41.35 4.85
410 411 1.224315 CCATGGATTCCAGTCCGCA 59.776 57.895 5.56 0.00 41.35 5.69
411 412 1.526917 CCCATGGATTCCAGTCCGC 60.527 63.158 15.22 0.00 41.35 5.54
412 413 1.526917 GCCCATGGATTCCAGTCCG 60.527 63.158 15.22 0.00 41.35 4.79
413 414 1.526917 CGCCCATGGATTCCAGTCC 60.527 63.158 15.22 0.00 36.75 3.85
414 415 0.815615 GACGCCCATGGATTCCAGTC 60.816 60.000 15.22 8.68 36.75 3.51
415 416 1.224592 GACGCCCATGGATTCCAGT 59.775 57.895 15.22 2.85 36.75 4.00
416 417 1.889105 CGACGCCCATGGATTCCAG 60.889 63.158 15.22 3.64 36.75 3.86
417 418 2.189257 CGACGCCCATGGATTCCA 59.811 61.111 15.22 8.08 38.19 3.53
418 419 2.591715 CCGACGCCCATGGATTCC 60.592 66.667 15.22 0.00 0.00 3.01
419 420 2.591715 CCCGACGCCCATGGATTC 60.592 66.667 15.22 5.20 0.00 2.52
420 421 4.875713 GCCCGACGCCCATGGATT 62.876 66.667 15.22 0.00 0.00 3.01
442 443 2.113139 CACACACACACCTCCCCC 59.887 66.667 0.00 0.00 0.00 5.40
443 444 1.525995 CACACACACACACCTCCCC 60.526 63.158 0.00 0.00 0.00 4.81
444 445 1.095228 CACACACACACACACCTCCC 61.095 60.000 0.00 0.00 0.00 4.30
445 446 1.095228 CCACACACACACACACCTCC 61.095 60.000 0.00 0.00 0.00 4.30
446 447 1.095228 CCCACACACACACACACCTC 61.095 60.000 0.00 0.00 0.00 3.85
447 448 1.077787 CCCACACACACACACACCT 60.078 57.895 0.00 0.00 0.00 4.00
448 449 2.118404 CCCCACACACACACACACC 61.118 63.158 0.00 0.00 0.00 4.16
449 450 2.118404 CCCCCACACACACACACAC 61.118 63.158 0.00 0.00 0.00 3.82
450 451 2.273776 CCCCCACACACACACACA 59.726 61.111 0.00 0.00 0.00 3.72
487 488 1.080705 CCTTGTCGTCGGTCACTCC 60.081 63.158 0.00 0.00 0.00 3.85
488 489 1.080705 CCCTTGTCGTCGGTCACTC 60.081 63.158 0.00 0.00 0.00 3.51
489 490 1.524863 CTCCCTTGTCGTCGGTCACT 61.525 60.000 0.00 0.00 0.00 3.41
490 491 1.080705 CTCCCTTGTCGTCGGTCAC 60.081 63.158 0.00 0.00 0.00 3.67
491 492 2.273179 CCTCCCTTGTCGTCGGTCA 61.273 63.158 0.00 0.00 0.00 4.02
492 493 2.572284 CCTCCCTTGTCGTCGGTC 59.428 66.667 0.00 0.00 0.00 4.79
493 494 2.995574 CCCTCCCTTGTCGTCGGT 60.996 66.667 0.00 0.00 0.00 4.69
494 495 2.995574 ACCCTCCCTTGTCGTCGG 60.996 66.667 0.00 0.00 0.00 4.79
495 496 2.261671 CACCCTCCCTTGTCGTCG 59.738 66.667 0.00 0.00 0.00 5.12
496 497 2.663196 CCACCCTCCCTTGTCGTC 59.337 66.667 0.00 0.00 0.00 4.20
497 498 3.637273 GCCACCCTCCCTTGTCGT 61.637 66.667 0.00 0.00 0.00 4.34
498 499 4.410400 GGCCACCCTCCCTTGTCG 62.410 72.222 0.00 0.00 0.00 4.35
499 500 3.256960 TGGCCACCCTCCCTTGTC 61.257 66.667 0.00 0.00 0.00 3.18
500 501 3.580319 GTGGCCACCCTCCCTTGT 61.580 66.667 26.31 0.00 0.00 3.16
501 502 4.366684 GGTGGCCACCCTCCCTTG 62.367 72.222 40.65 0.00 45.68 3.61
523 524 3.072486 ATACCGTCGGCCACTTCGG 62.072 63.158 12.28 18.70 46.98 4.30
524 525 1.876714 CATACCGTCGGCCACTTCG 60.877 63.158 12.28 0.85 0.00 3.79
525 526 0.108520 TTCATACCGTCGGCCACTTC 60.109 55.000 12.28 0.00 0.00 3.01
526 527 0.108329 CTTCATACCGTCGGCCACTT 60.108 55.000 12.28 0.00 0.00 3.16
527 528 1.515954 CTTCATACCGTCGGCCACT 59.484 57.895 12.28 0.00 0.00 4.00
528 529 2.171725 GCTTCATACCGTCGGCCAC 61.172 63.158 12.28 0.00 0.00 5.01
529 530 1.038681 TAGCTTCATACCGTCGGCCA 61.039 55.000 12.28 0.00 0.00 5.36
530 531 0.318784 CTAGCTTCATACCGTCGGCC 60.319 60.000 12.28 0.00 0.00 6.13
531 532 0.318784 CCTAGCTTCATACCGTCGGC 60.319 60.000 12.28 0.00 0.00 5.54
532 533 1.030457 ACCTAGCTTCATACCGTCGG 58.970 55.000 10.48 10.48 0.00 4.79
533 534 1.269102 CCACCTAGCTTCATACCGTCG 60.269 57.143 0.00 0.00 0.00 5.12
534 535 2.029623 TCCACCTAGCTTCATACCGTC 58.970 52.381 0.00 0.00 0.00 4.79
535 536 1.755380 GTCCACCTAGCTTCATACCGT 59.245 52.381 0.00 0.00 0.00 4.83
536 537 1.269102 CGTCCACCTAGCTTCATACCG 60.269 57.143 0.00 0.00 0.00 4.02
537 538 1.538419 GCGTCCACCTAGCTTCATACC 60.538 57.143 0.00 0.00 0.00 2.73
538 539 1.538419 GGCGTCCACCTAGCTTCATAC 60.538 57.143 0.00 0.00 0.00 2.39
539 540 0.750850 GGCGTCCACCTAGCTTCATA 59.249 55.000 0.00 0.00 0.00 2.15
540 541 1.522569 GGCGTCCACCTAGCTTCAT 59.477 57.895 0.00 0.00 0.00 2.57
541 542 2.978824 GGCGTCCACCTAGCTTCA 59.021 61.111 0.00 0.00 0.00 3.02
542 543 2.202756 CGGCGTCCACCTAGCTTC 60.203 66.667 0.00 0.00 0.00 3.86
543 544 4.452733 GCGGCGTCCACCTAGCTT 62.453 66.667 9.37 0.00 0.00 3.74
565 566 4.493747 AACGCCGCTCGCTACTCC 62.494 66.667 0.00 0.00 43.23 3.85
566 567 3.248171 CAACGCCGCTCGCTACTC 61.248 66.667 0.00 0.00 43.23 2.59
567 568 4.796231 CCAACGCCGCTCGCTACT 62.796 66.667 0.00 0.00 43.23 2.57
579 580 3.121030 CTTGCTCCTCGCCCAACG 61.121 66.667 0.00 0.00 45.62 4.10
580 581 1.743252 CTCTTGCTCCTCGCCCAAC 60.743 63.158 0.00 0.00 38.05 3.77
581 582 2.665000 CTCTTGCTCCTCGCCCAA 59.335 61.111 0.00 0.00 38.05 4.12
582 583 3.393970 CCTCTTGCTCCTCGCCCA 61.394 66.667 0.00 0.00 38.05 5.36
583 584 3.077556 TCCTCTTGCTCCTCGCCC 61.078 66.667 0.00 0.00 38.05 6.13
584 585 2.498726 CTCCTCTTGCTCCTCGCC 59.501 66.667 0.00 0.00 38.05 5.54
585 586 2.202864 GCTCCTCTTGCTCCTCGC 60.203 66.667 0.00 0.00 39.77 5.03
586 587 1.153667 GTGCTCCTCTTGCTCCTCG 60.154 63.158 0.00 0.00 0.00 4.63
587 588 1.220477 GGTGCTCCTCTTGCTCCTC 59.780 63.158 0.00 0.00 39.95 3.71
588 589 2.654079 CGGTGCTCCTCTTGCTCCT 61.654 63.158 2.85 0.00 40.65 3.69
589 590 2.125350 CGGTGCTCCTCTTGCTCC 60.125 66.667 2.85 0.00 39.76 4.70
590 591 2.125350 CCGGTGCTCCTCTTGCTC 60.125 66.667 2.85 0.00 0.00 4.26
591 592 2.925170 ACCGGTGCTCCTCTTGCT 60.925 61.111 6.12 0.00 0.00 3.91
592 593 2.743928 CACCGGTGCTCCTCTTGC 60.744 66.667 24.02 0.00 0.00 4.01
593 594 2.046892 CCACCGGTGCTCCTCTTG 60.047 66.667 29.75 9.01 0.00 3.02
594 595 2.526873 ACCACCGGTGCTCCTCTT 60.527 61.111 29.75 3.35 32.98 2.85
595 596 2.997897 GACCACCGGTGCTCCTCT 60.998 66.667 29.75 5.96 35.25 3.69
596 597 4.436998 CGACCACCGGTGCTCCTC 62.437 72.222 29.75 17.44 35.25 3.71
613 614 3.615536 AAAATGCAGCAGCGACGGC 62.616 57.895 0.00 0.00 46.23 5.68
614 615 1.081242 AAAAATGCAGCAGCGACGG 60.081 52.632 0.00 0.00 46.23 4.79
615 616 4.539152 AAAAATGCAGCAGCGACG 57.461 50.000 0.00 0.00 46.23 5.12
633 634 9.770097 TGTGATAAGCAATCCAAACAATTTTAA 57.230 25.926 0.00 0.00 33.22 1.52
634 635 9.941325 ATGTGATAAGCAATCCAAACAATTTTA 57.059 25.926 0.00 0.00 33.22 1.52
635 636 8.723311 CATGTGATAAGCAATCCAAACAATTTT 58.277 29.630 0.00 0.00 33.22 1.82
636 637 7.879160 ACATGTGATAAGCAATCCAAACAATTT 59.121 29.630 0.00 0.00 33.22 1.82
637 638 7.332430 CACATGTGATAAGCAATCCAAACAATT 59.668 33.333 21.64 0.00 33.22 2.32
638 639 6.814644 CACATGTGATAAGCAATCCAAACAAT 59.185 34.615 21.64 0.00 33.22 2.71
639 640 6.157904 CACATGTGATAAGCAATCCAAACAA 58.842 36.000 21.64 0.00 33.22 2.83
640 641 5.243507 ACACATGTGATAAGCAATCCAAACA 59.756 36.000 31.94 0.00 33.22 2.83
641 642 5.713025 ACACATGTGATAAGCAATCCAAAC 58.287 37.500 31.94 0.00 33.22 2.93
642 643 5.476254 TGACACATGTGATAAGCAATCCAAA 59.524 36.000 31.94 0.00 33.22 3.28
643 644 5.008980 TGACACATGTGATAAGCAATCCAA 58.991 37.500 31.94 0.00 33.22 3.53
644 645 4.587891 TGACACATGTGATAAGCAATCCA 58.412 39.130 31.94 10.04 33.22 3.41
645 646 5.762825 ATGACACATGTGATAAGCAATCC 57.237 39.130 31.94 7.88 33.22 3.01
646 647 7.923888 AGTAATGACACATGTGATAAGCAATC 58.076 34.615 31.94 16.13 34.93 2.67
647 648 7.772292 AGAGTAATGACACATGTGATAAGCAAT 59.228 33.333 31.94 15.32 0.00 3.56
648 649 7.105588 AGAGTAATGACACATGTGATAAGCAA 58.894 34.615 31.94 8.21 0.00 3.91
649 650 6.643388 AGAGTAATGACACATGTGATAAGCA 58.357 36.000 31.94 19.28 0.00 3.91
650 651 7.545362 AAGAGTAATGACACATGTGATAAGC 57.455 36.000 31.94 15.80 0.00 3.09
651 652 9.764870 CAAAAGAGTAATGACACATGTGATAAG 57.235 33.333 31.94 5.65 0.00 1.73
652 653 8.236586 GCAAAAGAGTAATGACACATGTGATAA 58.763 33.333 31.94 16.31 0.00 1.75
653 654 7.390162 TGCAAAAGAGTAATGACACATGTGATA 59.610 33.333 31.94 19.26 0.00 2.15
654 655 6.207221 TGCAAAAGAGTAATGACACATGTGAT 59.793 34.615 31.94 16.02 0.00 3.06
655 656 5.530543 TGCAAAAGAGTAATGACACATGTGA 59.469 36.000 31.94 11.45 0.00 3.58
656 657 5.761003 TGCAAAAGAGTAATGACACATGTG 58.239 37.500 24.25 24.25 0.00 3.21
657 658 6.579666 ATGCAAAAGAGTAATGACACATGT 57.420 33.333 0.00 0.00 0.00 3.21
658 659 8.853345 GTTAATGCAAAAGAGTAATGACACATG 58.147 33.333 0.00 0.00 0.00 3.21
659 660 8.028938 GGTTAATGCAAAAGAGTAATGACACAT 58.971 33.333 0.00 0.00 0.00 3.21
660 661 7.367285 GGTTAATGCAAAAGAGTAATGACACA 58.633 34.615 0.00 0.00 0.00 3.72
661 662 6.523201 CGGTTAATGCAAAAGAGTAATGACAC 59.477 38.462 0.00 0.00 0.00 3.67
662 663 6.428465 TCGGTTAATGCAAAAGAGTAATGACA 59.572 34.615 0.00 0.00 0.00 3.58
663 664 6.837992 TCGGTTAATGCAAAAGAGTAATGAC 58.162 36.000 0.00 0.00 0.00 3.06
664 665 7.552687 AGATCGGTTAATGCAAAAGAGTAATGA 59.447 33.333 0.00 0.00 0.00 2.57
665 666 7.697691 AGATCGGTTAATGCAAAAGAGTAATG 58.302 34.615 0.00 0.00 0.00 1.90
666 667 7.865706 AGATCGGTTAATGCAAAAGAGTAAT 57.134 32.000 0.00 0.00 0.00 1.89
667 668 7.681939 AAGATCGGTTAATGCAAAAGAGTAA 57.318 32.000 0.00 0.00 0.00 2.24
668 669 8.038944 AGTAAGATCGGTTAATGCAAAAGAGTA 58.961 33.333 0.00 0.00 0.00 2.59
669 670 6.879458 AGTAAGATCGGTTAATGCAAAAGAGT 59.121 34.615 0.00 0.00 0.00 3.24
670 671 7.308782 AGTAAGATCGGTTAATGCAAAAGAG 57.691 36.000 0.00 0.00 0.00 2.85
671 672 8.780846 TTAGTAAGATCGGTTAATGCAAAAGA 57.219 30.769 0.00 0.00 0.00 2.52
672 673 9.651718 GATTAGTAAGATCGGTTAATGCAAAAG 57.348 33.333 0.00 0.00 0.00 2.27
673 674 9.168451 TGATTAGTAAGATCGGTTAATGCAAAA 57.832 29.630 0.00 0.00 0.00 2.44
674 675 8.725405 TGATTAGTAAGATCGGTTAATGCAAA 57.275 30.769 0.00 0.00 0.00 3.68
675 676 8.773645 CATGATTAGTAAGATCGGTTAATGCAA 58.226 33.333 0.00 0.00 0.00 4.08
676 677 7.931407 ACATGATTAGTAAGATCGGTTAATGCA 59.069 33.333 0.00 0.00 0.00 3.96
677 678 8.311650 ACATGATTAGTAAGATCGGTTAATGC 57.688 34.615 0.00 0.00 0.00 3.56
681 682 9.472361 GCTAAACATGATTAGTAAGATCGGTTA 57.528 33.333 20.12 0.00 35.70 2.85
682 683 7.985184 TGCTAAACATGATTAGTAAGATCGGTT 59.015 33.333 20.12 0.00 35.70 4.44
683 684 7.438459 GTGCTAAACATGATTAGTAAGATCGGT 59.562 37.037 20.12 0.00 35.70 4.69
684 685 7.438160 TGTGCTAAACATGATTAGTAAGATCGG 59.562 37.037 20.12 0.00 35.70 4.18
685 686 8.352752 TGTGCTAAACATGATTAGTAAGATCG 57.647 34.615 20.12 0.00 35.70 3.69
700 701 5.626142 TCCTCCAAGTTAATGTGCTAAACA 58.374 37.500 0.00 0.00 44.79 2.83
701 702 6.759497 ATCCTCCAAGTTAATGTGCTAAAC 57.241 37.500 0.00 0.00 0.00 2.01
702 703 8.325787 TCTTATCCTCCAAGTTAATGTGCTAAA 58.674 33.333 0.00 0.00 0.00 1.85
703 704 7.857456 TCTTATCCTCCAAGTTAATGTGCTAA 58.143 34.615 0.00 0.00 0.00 3.09
704 705 7.432148 TCTTATCCTCCAAGTTAATGTGCTA 57.568 36.000 0.00 0.00 0.00 3.49
705 706 6.313519 TCTTATCCTCCAAGTTAATGTGCT 57.686 37.500 0.00 0.00 0.00 4.40
706 707 7.251281 GTTTCTTATCCTCCAAGTTAATGTGC 58.749 38.462 0.00 0.00 0.00 4.57
707 708 7.414098 CGGTTTCTTATCCTCCAAGTTAATGTG 60.414 40.741 0.00 0.00 0.00 3.21
708 709 6.598064 CGGTTTCTTATCCTCCAAGTTAATGT 59.402 38.462 0.00 0.00 0.00 2.71
709 710 6.598064 ACGGTTTCTTATCCTCCAAGTTAATG 59.402 38.462 0.00 0.00 0.00 1.90
710 711 6.718294 ACGGTTTCTTATCCTCCAAGTTAAT 58.282 36.000 0.00 0.00 0.00 1.40
711 712 6.117975 ACGGTTTCTTATCCTCCAAGTTAA 57.882 37.500 0.00 0.00 0.00 2.01
773 774 1.886655 GCTGGAAATTTCGGGACTGGT 60.887 52.381 11.95 0.00 0.00 4.00
844 851 1.745653 GCTGGATGTTAGGTTGCTTCC 59.254 52.381 0.00 0.00 0.00 3.46
876 883 1.081108 GATTCGGCGGGATCTCTCG 60.081 63.158 7.21 0.00 0.00 4.04
1158 1165 4.980805 GTTGTGCGCGGGGTGAGA 62.981 66.667 8.83 0.00 0.00 3.27
1221 1228 0.606604 CAGTGCTGTTACCGTACCCT 59.393 55.000 0.00 0.00 0.00 4.34
1253 1260 3.387947 GCGGGAAGGAGGAACGGA 61.388 66.667 0.00 0.00 0.00 4.69
1254 1261 4.468689 GGCGGGAAGGAGGAACGG 62.469 72.222 0.00 0.00 0.00 4.44
1255 1262 4.814294 CGGCGGGAAGGAGGAACG 62.814 72.222 0.00 0.00 0.00 3.95
1256 1263 4.468689 CCGGCGGGAAGGAGGAAC 62.469 72.222 20.56 0.00 34.06 3.62
1316 1323 2.669113 CGCACTGCTAAATGTTGCACAT 60.669 45.455 0.00 0.00 41.31 3.21
1395 1402 3.264450 AGCCATAACCAGAAGCAGTTACT 59.736 43.478 0.00 0.00 31.61 2.24
1400 1407 2.119801 ACAGCCATAACCAGAAGCAG 57.880 50.000 0.00 0.00 0.00 4.24
1439 1449 6.324819 CAATTTACAGTCGATGCTTTTGGAT 58.675 36.000 0.00 0.00 0.00 3.41
1549 1560 7.172342 AGGCTTAATACATACCAACAAACTCA 58.828 34.615 0.00 0.00 0.00 3.41
1710 1721 2.292569 CCATAGCAGCCATCAATGACAC 59.707 50.000 0.00 0.00 0.00 3.67
1755 1766 2.037251 CGCCTACACCCTATGCAATACT 59.963 50.000 0.00 0.00 0.00 2.12
1756 1767 2.413837 CGCCTACACCCTATGCAATAC 58.586 52.381 0.00 0.00 0.00 1.89
1799 1810 3.118811 GGCCTATCTACTGATGAGATGGC 60.119 52.174 0.00 13.30 41.70 4.40
1853 1864 3.056250 AGTGCTCACGACATCTTTCTGAT 60.056 43.478 0.00 0.00 36.20 2.90
1864 1875 1.079503 GGATGGAAAGTGCTCACGAC 58.920 55.000 0.00 0.00 36.20 4.34
1956 1967 4.107311 GGGGTGGATTAATTCCCTTATCCA 59.893 45.833 17.69 0.00 44.77 3.41
1991 2002 2.620112 CCTCGCACTGCCCACAAAG 61.620 63.158 0.00 0.00 0.00 2.77
2151 2162 1.711206 CCTTTCTCGGTCGAAGGTTC 58.289 55.000 0.00 0.00 0.00 3.62
2162 2173 1.178534 TGGGGCAAAAGCCTTTCTCG 61.179 55.000 6.45 0.00 0.00 4.04
2165 2176 0.758734 AAGTGGGGCAAAAGCCTTTC 59.241 50.000 6.45 0.00 0.00 2.62
2175 2186 4.105537 TGGCATTATCTATAAAGTGGGGCA 59.894 41.667 0.00 0.00 0.00 5.36
2219 2230 1.608109 TGTGTTTGCTGCTACCATGTG 59.392 47.619 0.00 0.00 0.00 3.21
2229 2240 2.360553 TGGTGTTGTTGTGTTTGCTG 57.639 45.000 0.00 0.00 0.00 4.41
2249 2260 6.545666 TGGTTGCTTGAGAATTCTTCTTTGTA 59.454 34.615 9.87 0.00 40.87 2.41
2251 2262 5.835257 TGGTTGCTTGAGAATTCTTCTTTG 58.165 37.500 9.87 0.57 40.87 2.77
2252 2263 6.492772 AGATGGTTGCTTGAGAATTCTTCTTT 59.507 34.615 9.87 0.00 40.87 2.52
2254 2265 5.568392 AGATGGTTGCTTGAGAATTCTTCT 58.432 37.500 9.87 1.35 44.21 2.85
2255 2266 5.893897 AGATGGTTGCTTGAGAATTCTTC 57.106 39.130 9.87 3.85 0.00 2.87
2256 2267 7.765695 TTTAGATGGTTGCTTGAGAATTCTT 57.234 32.000 9.87 0.00 0.00 2.52
2257 2268 7.951347 ATTTAGATGGTTGCTTGAGAATTCT 57.049 32.000 7.95 7.95 0.00 2.40
2258 2269 8.348507 CCTATTTAGATGGTTGCTTGAGAATTC 58.651 37.037 0.00 0.00 0.00 2.17
2324 2335 6.497259 AGTGTGGAAACTGAAGTCTAATCCTA 59.503 38.462 0.00 0.00 0.00 2.94
2350 2361 9.859692 GTTTCTGTAGTTATTGTTGACAAGTAC 57.140 33.333 2.77 3.53 39.47 2.73
2373 2384 2.588620 TCGGTAGCATGGTTTTGGTTT 58.411 42.857 1.12 0.00 0.00 3.27
2404 2415 4.174762 CCGAGTTCTTAGTGAAGGCTTAC 58.825 47.826 0.00 0.00 35.01 2.34
2424 2435 5.651530 TCTCTTCATAGCTAACAAAGACCG 58.348 41.667 0.00 0.00 0.00 4.79
2456 2468 6.161381 ACTGAAAAGGCTAAAGCAATCAATG 58.839 36.000 4.07 0.00 44.36 2.82
2488 2502 6.545666 TCTTGCAGAAAACATAGAAGGAACAA 59.454 34.615 0.00 0.00 0.00 2.83
2521 2535 4.100808 AGCATGGAAGCAAAGTTAAAACCA 59.899 37.500 0.00 0.00 36.85 3.67
2608 2622 1.227380 GATGTAGAGGGTGGCTGCG 60.227 63.158 0.00 0.00 0.00 5.18
2633 2647 9.814899 TCCACCATAAATAATGCAAATAAACAG 57.185 29.630 0.00 0.00 33.92 3.16
2638 2652 7.385267 GCCATCCACCATAAATAATGCAAATA 58.615 34.615 0.00 0.00 33.92 1.40
2904 2918 4.627467 TCAAGCTTAAATGAGACTCTTCGC 59.373 41.667 0.00 0.00 0.00 4.70
2972 2987 4.822685 TTAATGTGCCATCCATTGCTTT 57.177 36.364 0.00 0.00 34.51 3.51
2993 3008 8.090214 CAGAATCACCAACTAATCCAAACAATT 58.910 33.333 0.00 0.00 0.00 2.32
3124 3139 6.258068 GGCACAATATCTCAGTTGGTACTAAC 59.742 42.308 13.80 13.80 31.96 2.34
3161 3176 9.248291 GAACAGCAGAAAACTTTCAAAATATGA 57.752 29.630 5.07 0.00 39.61 2.15
3202 3217 9.595823 GTGCTCAAACTTACTACAATCCTTATA 57.404 33.333 0.00 0.00 0.00 0.98
3239 3254 4.190772 CAAACAAAAAGGCACATTCCTGT 58.809 39.130 0.00 0.00 36.38 4.00
3240 3255 3.560896 CCAAACAAAAAGGCACATTCCTG 59.439 43.478 0.00 0.00 36.38 3.86
3241 3256 3.807553 CCAAACAAAAAGGCACATTCCT 58.192 40.909 0.00 0.00 38.31 3.36
3274 3320 0.039798 TGTACGAGTTGTGACGCTCC 60.040 55.000 0.00 0.00 0.00 4.70
3308 3354 4.918810 ATTGGCTTCGAGTTCAGTTTTT 57.081 36.364 0.00 0.00 0.00 1.94
3309 3355 4.499696 CCAATTGGCTTCGAGTTCAGTTTT 60.500 41.667 12.53 0.00 0.00 2.43
3310 3356 3.004734 CCAATTGGCTTCGAGTTCAGTTT 59.995 43.478 12.53 0.00 0.00 2.66
3311 3357 2.554032 CCAATTGGCTTCGAGTTCAGTT 59.446 45.455 12.53 0.00 0.00 3.16
3312 3358 2.154462 CCAATTGGCTTCGAGTTCAGT 58.846 47.619 12.53 0.00 0.00 3.41
3313 3359 2.095567 CACCAATTGGCTTCGAGTTCAG 60.096 50.000 24.79 0.00 39.32 3.02
3374 3489 7.763528 TCTTTCATTTGTTTGCATACAGTTTGT 59.236 29.630 9.95 0.00 0.00 2.83
3404 3519 7.938563 TGCCCGTATTTGCATAATTATTTTC 57.061 32.000 0.00 0.00 31.31 2.29
3426 3541 5.699458 ACTACCATTAAATGTAGCCGTATGC 59.301 40.000 12.32 0.00 41.71 3.14
3427 3542 7.724305 AACTACCATTAAATGTAGCCGTATG 57.276 36.000 12.32 0.00 0.00 2.39
3428 3543 8.423349 TGTAACTACCATTAAATGTAGCCGTAT 58.577 33.333 12.32 1.51 0.00 3.06
3429 3544 7.780064 TGTAACTACCATTAAATGTAGCCGTA 58.220 34.615 12.32 3.56 0.00 4.02
3430 3545 6.642430 TGTAACTACCATTAAATGTAGCCGT 58.358 36.000 12.32 4.25 0.00 5.68
3431 3546 6.759827 ACTGTAACTACCATTAAATGTAGCCG 59.240 38.462 12.32 3.18 0.00 5.52
3432 3547 8.502105 AACTGTAACTACCATTAAATGTAGCC 57.498 34.615 12.32 4.70 0.00 3.93
3459 3574 8.455903 TTGCATTGGGAAACATGAAATTTTTA 57.544 26.923 0.00 0.00 0.00 1.52
3465 3580 5.011840 TCAGATTGCATTGGGAAACATGAAA 59.988 36.000 0.00 0.00 0.00 2.69
3466 3581 4.527427 TCAGATTGCATTGGGAAACATGAA 59.473 37.500 0.00 0.00 0.00 2.57
3485 3600 6.360370 AACTAAGTTTACCATCTGCTCAGA 57.640 37.500 1.67 1.67 42.37 3.27
3509 3624 2.230750 TCTGATGCATATCTCTGCTCCG 59.769 50.000 0.00 0.00 42.75 4.63
3556 3671 1.006922 GGTCCAAGTTGCAGCAAGC 60.007 57.895 8.49 3.83 45.96 4.01
3557 3672 0.746063 TTGGTCCAAGTTGCAGCAAG 59.254 50.000 8.49 0.00 0.00 4.01
3582 3700 2.880268 TGCTGAAACCAGTGAGTGAATG 59.120 45.455 0.00 0.00 34.23 2.67
3585 3703 2.369860 AGATGCTGAAACCAGTGAGTGA 59.630 45.455 0.00 0.00 34.23 3.41
3621 3739 8.786898 GCTACTAAATTTCATGATTAGATGCCA 58.213 33.333 17.50 0.00 32.34 4.92
3637 3755 8.120465 CGATCACCATTTTAACGCTACTAAATT 58.880 33.333 0.00 0.00 0.00 1.82
3638 3756 7.493320 TCGATCACCATTTTAACGCTACTAAAT 59.507 33.333 0.00 0.00 0.00 1.40
3640 3758 6.254157 GTCGATCACCATTTTAACGCTACTAA 59.746 38.462 0.00 0.00 0.00 2.24
3641 3759 5.745294 GTCGATCACCATTTTAACGCTACTA 59.255 40.000 0.00 0.00 0.00 1.82
3642 3760 4.565564 GTCGATCACCATTTTAACGCTACT 59.434 41.667 0.00 0.00 0.00 2.57
3643 3761 4.260091 GGTCGATCACCATTTTAACGCTAC 60.260 45.833 8.84 0.00 45.98 3.58
3644 3762 3.866910 GGTCGATCACCATTTTAACGCTA 59.133 43.478 8.84 0.00 45.98 4.26
3657 3775 2.086054 AAGAAGCAGTGGTCGATCAC 57.914 50.000 21.37 21.37 37.89 3.06
3661 3779 2.891580 AGTAGAAAGAAGCAGTGGTCGA 59.108 45.455 0.00 0.00 0.00 4.20
3662 3780 3.305398 AGTAGAAAGAAGCAGTGGTCG 57.695 47.619 0.00 0.00 0.00 4.79
3667 3785 6.870965 CAGACATGTTAGTAGAAAGAAGCAGT 59.129 38.462 0.00 0.00 0.00 4.40
3675 3793 6.646653 CAGTTCAGCAGACATGTTAGTAGAAA 59.353 38.462 0.00 0.00 0.00 2.52
3763 3882 9.403583 TGGTTTTCAACTTCTGTATAAGAAACT 57.596 29.630 0.00 0.00 44.38 2.66
3772 3891 5.417580 GGCCATATGGTTTTCAACTTCTGTA 59.582 40.000 22.79 0.00 37.57 2.74
3790 3911 3.067742 GTCTGAACTTACGCTAGGCCATA 59.932 47.826 5.01 0.00 0.00 2.74
3874 3995 4.275196 CACTCGATCTATAAACGGGACTCA 59.725 45.833 0.00 0.00 0.00 3.41
3881 4002 9.447040 TTTAGTCAATCACTCGATCTATAAACG 57.553 33.333 0.00 0.00 36.43 3.60
3950 4071 6.718294 CCCAACTTAATAGTTCTACCAGGTT 58.282 40.000 0.00 0.00 42.67 3.50
3951 4072 5.338953 GCCCAACTTAATAGTTCTACCAGGT 60.339 44.000 0.00 0.00 42.67 4.00
3964 4085 4.785575 GGCCCAGCCCAACTTAAT 57.214 55.556 0.00 0.00 44.06 1.40
3979 4100 1.672145 GGTTTCGAGTACTCAGTGGGC 60.672 57.143 22.37 7.07 0.00 5.36
4030 4151 2.040412 AGCCCTCGAAATTTCCTGACTT 59.960 45.455 12.54 0.00 0.00 3.01
4032 4153 2.010497 GAGCCCTCGAAATTTCCTGAC 58.990 52.381 12.54 0.00 0.00 3.51
4072 4193 7.177568 TGAATGGCCAGCAAGTAAGTTTATTAA 59.822 33.333 13.05 0.00 0.00 1.40
4119 4240 1.851304 TTTGGCCTGGAAGCTTATGG 58.149 50.000 3.32 3.05 0.00 2.74
4133 4254 3.944650 AGTTGTTTCCAATGGTTTTTGGC 59.055 39.130 0.00 0.00 44.85 4.52
4305 4426 6.683090 TTGTCAAACAACAAAGAAGAAACG 57.317 33.333 0.00 0.00 36.25 3.60
4385 4508 5.120208 TCGTTGCTACTTAAGTTCTCAATGC 59.880 40.000 14.49 7.78 0.00 3.56
4404 4527 3.966218 CGCCAAGTAAGAAAAGTTCGTTG 59.034 43.478 0.00 0.00 34.02 4.10
4426 4549 2.738846 CACATGTACTGAGTTGAGTGGC 59.261 50.000 0.00 0.00 0.00 5.01
4507 4632 7.723172 AGGAAGGATGAAATAATTAGAAGGCTG 59.277 37.037 0.00 0.00 0.00 4.85
4741 4869 2.176273 GCCTCGCTCGCAATGTCAT 61.176 57.895 0.00 0.00 0.00 3.06
4990 5118 5.244851 ACAGAAATCAGCTCTCACTTACTGA 59.755 40.000 0.00 0.00 42.89 3.41
4991 5119 5.477510 ACAGAAATCAGCTCTCACTTACTG 58.522 41.667 0.00 0.00 0.00 2.74
5045 5173 6.708949 ACTTAAAGAAGCGTTGTGAAGGAATA 59.291 34.615 0.00 0.00 35.97 1.75
5073 5201 9.378551 CAAACACATACTAGCATTACTTCCTAA 57.621 33.333 0.00 0.00 0.00 2.69
5076 5204 6.458342 GCCAAACACATACTAGCATTACTTCC 60.458 42.308 0.00 0.00 0.00 3.46
5333 5462 4.446719 AGTTGTTTCACGGAAATCGAGTAC 59.553 41.667 0.00 0.00 42.43 2.73
5338 5467 3.870723 TCAGTTGTTTCACGGAAATCG 57.129 42.857 3.00 0.00 45.88 3.34
5348 5477 8.398665 ACAAAGAGAGTATGTTTCAGTTGTTTC 58.601 33.333 0.00 0.00 0.00 2.78
5366 5495 7.383687 ACGACAAGTATTTATGGACAAAGAGA 58.616 34.615 0.00 0.00 0.00 3.10
5396 5525 9.267071 TCGGAGAGATGGATAAAAATGGATATA 57.733 33.333 0.00 0.00 0.00 0.86
5397 5526 8.043710 GTCGGAGAGATGGATAAAAATGGATAT 58.956 37.037 0.00 0.00 36.95 1.63
5398 5527 7.016170 TGTCGGAGAGATGGATAAAAATGGATA 59.984 37.037 0.00 0.00 36.95 2.59
5399 5528 6.183361 TGTCGGAGAGATGGATAAAAATGGAT 60.183 38.462 0.00 0.00 36.95 3.41
5400 5529 5.130311 TGTCGGAGAGATGGATAAAAATGGA 59.870 40.000 0.00 0.00 36.95 3.41
5401 5530 5.368145 TGTCGGAGAGATGGATAAAAATGG 58.632 41.667 0.00 0.00 36.95 3.16
5402 5531 6.540189 ACTTGTCGGAGAGATGGATAAAAATG 59.460 38.462 0.00 0.00 36.95 2.32
5404 5533 6.049955 ACTTGTCGGAGAGATGGATAAAAA 57.950 37.500 0.00 0.00 36.95 1.94
5405 5534 5.677319 ACTTGTCGGAGAGATGGATAAAA 57.323 39.130 0.00 0.00 36.95 1.52
5406 5535 6.978674 ATACTTGTCGGAGAGATGGATAAA 57.021 37.500 0.00 0.00 36.95 1.40
5408 5537 6.015350 GGAAATACTTGTCGGAGAGATGGATA 60.015 42.308 0.00 0.00 36.95 2.59
5412 5573 4.045104 CGGAAATACTTGTCGGAGAGATG 58.955 47.826 0.00 0.00 36.95 2.90
5415 5576 2.426024 TCCGGAAATACTTGTCGGAGAG 59.574 50.000 0.00 0.00 43.84 3.20
5419 5580 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
5433 5594 2.879026 TCAATCATACTCTCTCCGTCCG 59.121 50.000 0.00 0.00 0.00 4.79
5434 5595 5.461032 AATCAATCATACTCTCTCCGTCC 57.539 43.478 0.00 0.00 0.00 4.79
5460 5621 8.616076 CAGTGGATATTCCTTAGCTTGTAAAAG 58.384 37.037 0.00 0.00 37.46 2.27
5462 5623 7.857456 TCAGTGGATATTCCTTAGCTTGTAAA 58.143 34.615 0.00 0.00 37.46 2.01
5484 5645 2.898729 AGGGTCGAAGTGCATATCAG 57.101 50.000 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.