Multiple sequence alignment - TraesCS3A01G211100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G211100 chr3A 100.000 5563 0 0 1 5563 377804088 377798526 0.000000e+00 10274.0
1 TraesCS3A01G211100 chr3D 91.253 4047 139 84 1583 5558 288112989 288109087 0.000000e+00 5313.0
2 TraesCS3A01G211100 chr3D 85.606 924 32 32 666 1539 288113862 288112990 0.000000e+00 876.0
3 TraesCS3A01G211100 chr3D 93.416 243 9 4 34 270 288119418 288119177 2.470000e-93 353.0
4 TraesCS3A01G211100 chr3D 88.213 263 21 6 268 520 91831627 91831889 7.000000e-79 305.0
5 TraesCS3A01G211100 chr3D 91.150 113 9 1 539 651 288114023 288113912 9.650000e-33 152.0
6 TraesCS3A01G211100 chr3B 89.433 2716 119 63 2920 5563 380893478 380890859 0.000000e+00 3271.0
7 TraesCS3A01G211100 chr3B 87.255 1122 50 41 1706 2786 380894618 380893549 0.000000e+00 1194.0
8 TraesCS3A01G211100 chr3B 83.333 1278 59 48 515 1723 380895827 380894635 0.000000e+00 1038.0
9 TraesCS3A01G211100 chr3B 88.800 125 5 6 152 270 380895944 380895823 1.620000e-30 145.0
10 TraesCS3A01G211100 chr1A 89.219 269 17 7 262 519 147365689 147365956 5.370000e-85 326.0
11 TraesCS3A01G211100 chr1A 93.069 101 6 1 1062 1162 586283229 586283328 4.490000e-31 147.0
12 TraesCS3A01G211100 chr4A 88.550 262 18 8 268 518 62950252 62950512 1.950000e-79 307.0
13 TraesCS3A01G211100 chr4A 87.452 263 23 6 267 519 574544937 574544675 1.520000e-75 294.0
14 TraesCS3A01G211100 chr4A 86.765 272 24 8 266 525 18382751 18382480 5.450000e-75 292.0
15 TraesCS3A01G211100 chr4A 83.577 274 34 7 267 530 410365098 410364826 4.300000e-61 246.0
16 TraesCS3A01G211100 chr4A 81.905 105 8 6 265 359 185427970 185428073 1.660000e-10 78.7
17 TraesCS3A01G211100 chr7A 87.732 269 23 6 265 523 578444757 578444489 7.000000e-79 305.0
18 TraesCS3A01G211100 chr7A 87.970 266 21 7 263 518 79196750 79196486 2.520000e-78 303.0
19 TraesCS3A01G211100 chr7A 86.397 272 25 8 266 525 659022531 659022802 2.540000e-73 287.0
20 TraesCS3A01G211100 chr7A 81.749 263 38 6 268 520 386622726 386622988 1.570000e-50 211.0
21 TraesCS3A01G211100 chr7A 92.308 65 4 1 1073 1137 639586445 639586382 2.130000e-14 91.6
22 TraesCS3A01G211100 chr2A 88.168 262 22 5 267 519 82986441 82986702 2.520000e-78 303.0
23 TraesCS3A01G211100 chr2A 85.985 264 24 9 267 519 163450292 163450031 2.550000e-68 270.0
24 TraesCS3A01G211100 chrUn 84.528 265 30 7 264 517 126958386 126958650 9.250000e-63 252.0
25 TraesCS3A01G211100 chr7B 81.273 267 39 6 268 524 359356125 359355860 7.310000e-49 206.0
26 TraesCS3A01G211100 chr1D 89.815 108 9 2 1055 1162 487807911 487808016 2.700000e-28 137.0
27 TraesCS3A01G211100 chr1B 89.815 108 9 2 1055 1162 679567481 679567586 2.700000e-28 137.0
28 TraesCS3A01G211100 chr1B 85.714 105 15 0 3151 3255 679569826 679569930 1.640000e-20 111.0
29 TraesCS3A01G211100 chr5A 78.173 197 27 11 239 422 51905096 51904903 1.640000e-20 111.0
30 TraesCS3A01G211100 chr5A 93.182 44 3 0 1120 1163 549953324 549953367 1.290000e-06 65.8
31 TraesCS3A01G211100 chr4D 91.026 78 6 1 1062 1139 228529773 228529697 2.740000e-18 104.0
32 TraesCS3A01G211100 chr7D 89.024 82 8 1 1058 1139 506817354 506817274 3.550000e-17 100.0
33 TraesCS3A01G211100 chr5D 95.455 44 2 0 1120 1163 435933403 435933446 2.780000e-08 71.3
34 TraesCS3A01G211100 chr4B 100.000 31 0 0 4989 5019 518086837 518086867 2.160000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G211100 chr3A 377798526 377804088 5562 True 10274.000000 10274 100.000000 1 5563 1 chr3A.!!$R1 5562
1 TraesCS3A01G211100 chr3D 288109087 288114023 4936 True 2113.666667 5313 89.336333 539 5558 3 chr3D.!!$R2 5019
2 TraesCS3A01G211100 chr3B 380890859 380895944 5085 True 1412.000000 3271 87.205250 152 5563 4 chr3B.!!$R1 5411

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
78 79 0.032952 ACACTTACGCACGACACCAT 59.967 50.0 0.00 0.0 0.00 3.55 F
137 138 0.095417 GAAGCGCAACAAGTCCGATC 59.905 55.0 11.47 0.0 0.00 3.69 F
140 141 0.095417 GCGCAACAAGTCCGATCTTC 59.905 55.0 0.30 0.0 0.00 2.87 F
1864 2040 0.105401 TGCCTCCCCACCGTATATCA 60.105 55.0 0.00 0.0 0.00 2.15 F
3178 3452 0.035915 GAGAGCCTGTTGGGGAAGTC 60.036 60.0 0.00 0.0 35.12 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1573 1694 0.106369 ATGACCATGACCCAGCCATG 60.106 55.0 0.0 0.0 40.66 3.66 R
1866 2042 0.178935 GAGAGGGAGGGAGCTATGCT 60.179 60.0 0.0 0.0 43.88 3.79 R
1872 2048 0.178990 GAGAGAGAGAGGGAGGGAGC 60.179 65.0 0.0 0.0 0.00 4.70 R
3352 3630 0.037303 ACCTGTGGTGCAAGAGATGG 59.963 55.0 0.0 0.0 32.98 3.51 R
4801 5118 0.177373 TCTGCTGCTGCTCCTACATG 59.823 55.0 17.0 0.0 40.48 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.201951 CAACCGTAAGCTCGCCAT 57.798 55.556 0.00 0.00 0.00 4.40
18 19 3.355816 CAACCGTAAGCTCGCCATA 57.644 52.632 0.00 0.00 0.00 2.74
19 20 1.647346 CAACCGTAAGCTCGCCATAA 58.353 50.000 0.00 0.00 0.00 1.90
20 21 2.210116 CAACCGTAAGCTCGCCATAAT 58.790 47.619 0.00 0.00 0.00 1.28
21 22 3.386486 CAACCGTAAGCTCGCCATAATA 58.614 45.455 0.00 0.00 0.00 0.98
22 23 3.738830 ACCGTAAGCTCGCCATAATAA 57.261 42.857 0.00 0.00 0.00 1.40
23 24 4.062677 ACCGTAAGCTCGCCATAATAAA 57.937 40.909 0.00 0.00 0.00 1.40
24 25 3.805971 ACCGTAAGCTCGCCATAATAAAC 59.194 43.478 0.00 0.00 0.00 2.01
25 26 4.056050 CCGTAAGCTCGCCATAATAAACT 58.944 43.478 0.00 0.00 0.00 2.66
26 27 4.150098 CCGTAAGCTCGCCATAATAAACTC 59.850 45.833 0.00 0.00 0.00 3.01
27 28 4.743151 CGTAAGCTCGCCATAATAAACTCA 59.257 41.667 0.00 0.00 0.00 3.41
28 29 5.332355 CGTAAGCTCGCCATAATAAACTCAC 60.332 44.000 0.00 0.00 0.00 3.51
29 30 4.408182 AGCTCGCCATAATAAACTCACT 57.592 40.909 0.00 0.00 0.00 3.41
30 31 4.372656 AGCTCGCCATAATAAACTCACTC 58.627 43.478 0.00 0.00 0.00 3.51
31 32 4.119862 GCTCGCCATAATAAACTCACTCA 58.880 43.478 0.00 0.00 0.00 3.41
32 33 4.752101 GCTCGCCATAATAAACTCACTCAT 59.248 41.667 0.00 0.00 0.00 2.90
33 34 5.107298 GCTCGCCATAATAAACTCACTCATC 60.107 44.000 0.00 0.00 0.00 2.92
34 35 4.982295 TCGCCATAATAAACTCACTCATCG 59.018 41.667 0.00 0.00 0.00 3.84
35 36 4.376413 CGCCATAATAAACTCACTCATCGC 60.376 45.833 0.00 0.00 0.00 4.58
36 37 4.511454 GCCATAATAAACTCACTCATCGCA 59.489 41.667 0.00 0.00 0.00 5.10
37 38 5.559035 GCCATAATAAACTCACTCATCGCAC 60.559 44.000 0.00 0.00 0.00 5.34
38 39 5.050091 CCATAATAAACTCACTCATCGCACC 60.050 44.000 0.00 0.00 0.00 5.01
39 40 1.990799 TAAACTCACTCATCGCACCG 58.009 50.000 0.00 0.00 0.00 4.94
40 41 0.670546 AAACTCACTCATCGCACCGG 60.671 55.000 0.00 0.00 0.00 5.28
41 42 2.887568 CTCACTCATCGCACCGGC 60.888 66.667 0.00 0.00 0.00 6.13
42 43 3.647649 CTCACTCATCGCACCGGCA 62.648 63.158 0.00 0.00 41.24 5.69
43 44 2.741985 CACTCATCGCACCGGCAA 60.742 61.111 0.00 0.00 41.24 4.52
44 45 2.031919 ACTCATCGCACCGGCAAA 59.968 55.556 0.00 0.00 41.24 3.68
45 46 1.377202 ACTCATCGCACCGGCAAAT 60.377 52.632 0.00 0.00 41.24 2.32
46 47 0.960364 ACTCATCGCACCGGCAAATT 60.960 50.000 0.00 0.00 41.24 1.82
47 48 0.248215 CTCATCGCACCGGCAAATTC 60.248 55.000 0.00 0.00 41.24 2.17
48 49 1.226660 CATCGCACCGGCAAATTCC 60.227 57.895 0.00 0.00 41.24 3.01
58 59 1.298638 GCAAATTCCGATGCCGAGC 60.299 57.895 0.00 0.00 36.56 5.03
59 60 1.992233 GCAAATTCCGATGCCGAGCA 61.992 55.000 1.01 1.01 44.86 4.26
60 61 0.248215 CAAATTCCGATGCCGAGCAC 60.248 55.000 0.50 0.00 43.04 4.40
61 62 0.676466 AAATTCCGATGCCGAGCACA 60.676 50.000 0.50 0.00 43.04 4.57
62 63 1.369091 AATTCCGATGCCGAGCACAC 61.369 55.000 0.50 0.00 43.04 3.82
63 64 2.244117 ATTCCGATGCCGAGCACACT 62.244 55.000 0.50 0.00 43.04 3.55
64 65 2.434884 CCGATGCCGAGCACACTT 60.435 61.111 0.50 0.00 43.04 3.16
65 66 1.153647 CCGATGCCGAGCACACTTA 60.154 57.895 0.50 0.00 43.04 2.24
66 67 1.421410 CCGATGCCGAGCACACTTAC 61.421 60.000 0.50 0.00 43.04 2.34
67 68 1.742900 CGATGCCGAGCACACTTACG 61.743 60.000 0.50 0.00 43.04 3.18
68 69 2.025359 GATGCCGAGCACACTTACGC 62.025 60.000 0.50 0.00 43.04 4.42
69 70 2.736995 GCCGAGCACACTTACGCA 60.737 61.111 0.00 0.00 0.00 5.24
70 71 3.011760 GCCGAGCACACTTACGCAC 62.012 63.158 0.00 0.00 0.00 5.34
71 72 2.716828 CCGAGCACACTTACGCACG 61.717 63.158 0.00 0.00 41.08 5.34
72 73 1.728074 CGAGCACACTTACGCACGA 60.728 57.895 0.00 0.00 43.54 4.35
73 74 1.773496 GAGCACACTTACGCACGAC 59.227 57.895 0.00 0.00 0.00 4.34
74 75 0.937699 GAGCACACTTACGCACGACA 60.938 55.000 0.00 0.00 0.00 4.35
75 76 1.200839 GCACACTTACGCACGACAC 59.799 57.895 0.00 0.00 0.00 3.67
76 77 1.850640 CACACTTACGCACGACACC 59.149 57.895 0.00 0.00 0.00 4.16
77 78 0.872451 CACACTTACGCACGACACCA 60.872 55.000 0.00 0.00 0.00 4.17
78 79 0.032952 ACACTTACGCACGACACCAT 59.967 50.000 0.00 0.00 0.00 3.55
79 80 1.270274 ACACTTACGCACGACACCATA 59.730 47.619 0.00 0.00 0.00 2.74
80 81 2.288334 ACACTTACGCACGACACCATAA 60.288 45.455 0.00 0.00 0.00 1.90
81 82 2.732500 CACTTACGCACGACACCATAAA 59.267 45.455 0.00 0.00 0.00 1.40
82 83 3.369756 CACTTACGCACGACACCATAAAT 59.630 43.478 0.00 0.00 0.00 1.40
83 84 3.998341 ACTTACGCACGACACCATAAATT 59.002 39.130 0.00 0.00 0.00 1.82
84 85 4.092383 ACTTACGCACGACACCATAAATTC 59.908 41.667 0.00 0.00 0.00 2.17
85 86 1.392168 ACGCACGACACCATAAATTCG 59.608 47.619 0.00 0.00 37.50 3.34
86 87 1.267334 CGCACGACACCATAAATTCGG 60.267 52.381 0.00 0.00 35.77 4.30
87 88 2.004017 GCACGACACCATAAATTCGGA 58.996 47.619 0.00 0.00 35.77 4.55
88 89 2.612212 GCACGACACCATAAATTCGGAT 59.388 45.455 0.00 0.00 35.77 4.18
89 90 3.303132 GCACGACACCATAAATTCGGATC 60.303 47.826 0.00 0.00 35.77 3.36
90 91 4.119862 CACGACACCATAAATTCGGATCT 58.880 43.478 0.00 0.00 35.77 2.75
91 92 4.570772 CACGACACCATAAATTCGGATCTT 59.429 41.667 0.00 0.00 35.77 2.40
92 93 4.570772 ACGACACCATAAATTCGGATCTTG 59.429 41.667 0.00 0.00 35.77 3.02
93 94 4.808895 CGACACCATAAATTCGGATCTTGA 59.191 41.667 0.00 0.00 0.00 3.02
94 95 5.276868 CGACACCATAAATTCGGATCTTGAC 60.277 44.000 0.00 0.00 0.00 3.18
95 96 4.881850 ACACCATAAATTCGGATCTTGACC 59.118 41.667 0.00 0.00 0.00 4.02
96 97 4.881273 CACCATAAATTCGGATCTTGACCA 59.119 41.667 0.00 0.00 0.00 4.02
97 98 4.881850 ACCATAAATTCGGATCTTGACCAC 59.118 41.667 0.00 0.00 0.00 4.16
98 99 4.275936 CCATAAATTCGGATCTTGACCACC 59.724 45.833 0.00 0.00 0.00 4.61
99 100 3.433306 AAATTCGGATCTTGACCACCA 57.567 42.857 0.00 0.00 0.00 4.17
100 101 3.652057 AATTCGGATCTTGACCACCAT 57.348 42.857 0.00 0.00 0.00 3.55
101 102 2.691409 TTCGGATCTTGACCACCATC 57.309 50.000 0.00 0.00 0.00 3.51
102 103 1.567357 TCGGATCTTGACCACCATCA 58.433 50.000 0.00 0.00 0.00 3.07
103 104 2.118679 TCGGATCTTGACCACCATCAT 58.881 47.619 0.00 0.00 0.00 2.45
104 105 2.158914 TCGGATCTTGACCACCATCATG 60.159 50.000 0.00 0.00 0.00 3.07
105 106 2.158914 CGGATCTTGACCACCATCATGA 60.159 50.000 0.00 0.00 37.23 3.07
106 107 3.474600 GGATCTTGACCACCATCATGAG 58.525 50.000 0.09 0.00 36.53 2.90
107 108 3.474600 GATCTTGACCACCATCATGAGG 58.525 50.000 0.09 0.00 36.53 3.86
108 109 2.550175 TCTTGACCACCATCATGAGGA 58.450 47.619 9.37 0.00 31.25 3.71
109 110 3.117745 TCTTGACCACCATCATGAGGAT 58.882 45.455 9.37 0.00 36.39 3.24
110 111 3.524789 TCTTGACCACCATCATGAGGATT 59.475 43.478 9.37 0.00 32.57 3.01
111 112 4.018141 TCTTGACCACCATCATGAGGATTT 60.018 41.667 9.37 0.00 32.57 2.17
112 113 3.623703 TGACCACCATCATGAGGATTTG 58.376 45.455 9.37 2.96 32.57 2.32
113 114 2.954318 GACCACCATCATGAGGATTTGG 59.046 50.000 9.37 13.87 40.38 3.28
114 115 2.312741 ACCACCATCATGAGGATTTGGT 59.687 45.455 17.43 17.43 41.78 3.67
115 116 3.245730 ACCACCATCATGAGGATTTGGTT 60.246 43.478 14.03 0.35 43.06 3.67
116 117 3.770933 CCACCATCATGAGGATTTGGTTT 59.229 43.478 14.03 0.00 31.66 3.27
117 118 4.382254 CCACCATCATGAGGATTTGGTTTG 60.382 45.833 14.03 6.33 31.66 2.93
118 119 3.770933 ACCATCATGAGGATTTGGTTTGG 59.229 43.478 9.37 6.03 30.21 3.28
119 120 4.025360 CCATCATGAGGATTTGGTTTGGA 58.975 43.478 9.37 0.00 32.57 3.53
120 121 4.467082 CCATCATGAGGATTTGGTTTGGAA 59.533 41.667 9.37 0.00 32.57 3.53
121 122 5.394883 CCATCATGAGGATTTGGTTTGGAAG 60.395 44.000 9.37 0.00 32.57 3.46
122 123 3.511146 TCATGAGGATTTGGTTTGGAAGC 59.489 43.478 0.00 0.00 0.00 3.86
123 124 1.885887 TGAGGATTTGGTTTGGAAGCG 59.114 47.619 0.00 0.00 0.00 4.68
124 125 0.603065 AGGATTTGGTTTGGAAGCGC 59.397 50.000 0.00 0.00 0.00 5.92
125 126 0.316841 GGATTTGGTTTGGAAGCGCA 59.683 50.000 11.47 0.00 0.00 6.09
126 127 1.270041 GGATTTGGTTTGGAAGCGCAA 60.270 47.619 11.47 0.00 0.00 4.85
127 128 1.792367 GATTTGGTTTGGAAGCGCAAC 59.208 47.619 11.47 4.31 0.00 4.17
128 129 0.532573 TTTGGTTTGGAAGCGCAACA 59.467 45.000 11.47 1.61 0.00 3.33
129 130 0.532573 TTGGTTTGGAAGCGCAACAA 59.467 45.000 11.47 8.88 0.00 2.83
130 131 0.102120 TGGTTTGGAAGCGCAACAAG 59.898 50.000 11.47 0.00 0.00 3.16
131 132 0.102300 GGTTTGGAAGCGCAACAAGT 59.898 50.000 11.47 0.00 0.00 3.16
132 133 1.477105 GTTTGGAAGCGCAACAAGTC 58.523 50.000 11.47 5.39 0.00 3.01
133 134 0.383949 TTTGGAAGCGCAACAAGTCC 59.616 50.000 11.47 6.74 0.00 3.85
134 135 1.781025 TTGGAAGCGCAACAAGTCCG 61.781 55.000 11.47 0.00 0.00 4.79
135 136 1.959226 GGAAGCGCAACAAGTCCGA 60.959 57.895 11.47 0.00 0.00 4.55
136 137 1.298859 GGAAGCGCAACAAGTCCGAT 61.299 55.000 11.47 0.00 0.00 4.18
137 138 0.095417 GAAGCGCAACAAGTCCGATC 59.905 55.000 11.47 0.00 0.00 3.69
138 139 0.320771 AAGCGCAACAAGTCCGATCT 60.321 50.000 11.47 0.00 0.00 2.75
139 140 0.320771 AGCGCAACAAGTCCGATCTT 60.321 50.000 11.47 0.00 0.00 2.40
140 141 0.095417 GCGCAACAAGTCCGATCTTC 59.905 55.000 0.30 0.00 0.00 2.87
141 142 1.714794 CGCAACAAGTCCGATCTTCT 58.285 50.000 0.00 0.00 0.00 2.85
142 143 1.656095 CGCAACAAGTCCGATCTTCTC 59.344 52.381 0.00 0.00 0.00 2.87
157 158 3.585862 TCTTCTCGGAGGTGAATTTTCG 58.414 45.455 4.96 0.00 0.00 3.46
164 165 4.218200 TCGGAGGTGAATTTTCGTACTACA 59.782 41.667 0.00 0.00 0.00 2.74
165 166 4.561606 CGGAGGTGAATTTTCGTACTACAG 59.438 45.833 0.00 0.00 0.00 2.74
179 180 1.978542 CTACAGCTCGCGTTGTAGTT 58.021 50.000 25.52 7.74 44.85 2.24
180 181 1.649171 CTACAGCTCGCGTTGTAGTTG 59.351 52.381 25.52 18.35 44.85 3.16
181 182 0.249322 ACAGCTCGCGTTGTAGTTGT 60.249 50.000 5.77 7.66 32.46 3.32
182 183 0.859232 CAGCTCGCGTTGTAGTTGTT 59.141 50.000 5.77 0.00 0.00 2.83
183 184 2.055838 CAGCTCGCGTTGTAGTTGTTA 58.944 47.619 5.77 0.00 0.00 2.41
185 186 2.921754 AGCTCGCGTTGTAGTTGTTATC 59.078 45.455 5.77 0.00 0.00 1.75
186 187 2.921754 GCTCGCGTTGTAGTTGTTATCT 59.078 45.455 5.77 0.00 0.00 1.98
187 188 3.000971 GCTCGCGTTGTAGTTGTTATCTC 60.001 47.826 5.77 0.00 0.00 2.75
188 189 3.165890 TCGCGTTGTAGTTGTTATCTCG 58.834 45.455 5.77 0.00 0.00 4.04
189 190 2.912967 CGCGTTGTAGTTGTTATCTCGT 59.087 45.455 0.00 0.00 0.00 4.18
191 192 4.625135 GCGTTGTAGTTGTTATCTCGTTG 58.375 43.478 0.00 0.00 0.00 4.10
192 193 4.433805 GCGTTGTAGTTGTTATCTCGTTGG 60.434 45.833 0.00 0.00 0.00 3.77
193 194 4.682860 CGTTGTAGTTGTTATCTCGTTGGT 59.317 41.667 0.00 0.00 0.00 3.67
204 209 4.592485 ATCTCGTTGGTGATCATCTACC 57.408 45.455 13.84 4.22 37.48 3.18
219 224 1.421646 TCTACCGCTACTACTACCCCC 59.578 57.143 0.00 0.00 0.00 5.40
265 270 4.083431 CGTTTCTTGTCTCGGTCTCTCTTA 60.083 45.833 0.00 0.00 0.00 2.10
266 271 5.395642 GTTTCTTGTCTCGGTCTCTCTTAG 58.604 45.833 0.00 0.00 0.00 2.18
267 272 4.289238 TCTTGTCTCGGTCTCTCTTAGT 57.711 45.455 0.00 0.00 0.00 2.24
268 273 5.417754 TCTTGTCTCGGTCTCTCTTAGTA 57.582 43.478 0.00 0.00 0.00 1.82
269 274 5.177326 TCTTGTCTCGGTCTCTCTTAGTAC 58.823 45.833 0.00 0.00 0.00 2.73
270 275 4.822685 TGTCTCGGTCTCTCTTAGTACT 57.177 45.455 0.00 0.00 0.00 2.73
271 276 4.757594 TGTCTCGGTCTCTCTTAGTACTC 58.242 47.826 0.00 0.00 0.00 2.59
272 277 4.467082 TGTCTCGGTCTCTCTTAGTACTCT 59.533 45.833 0.00 0.00 0.00 3.24
273 278 5.045872 GTCTCGGTCTCTCTTAGTACTCTC 58.954 50.000 0.00 0.00 0.00 3.20
274 279 4.957954 TCTCGGTCTCTCTTAGTACTCTCT 59.042 45.833 0.00 0.00 0.00 3.10
275 280 5.422970 TCTCGGTCTCTCTTAGTACTCTCTT 59.577 44.000 0.00 0.00 0.00 2.85
276 281 6.052405 TCGGTCTCTCTTAGTACTCTCTTT 57.948 41.667 0.00 0.00 0.00 2.52
277 282 5.875910 TCGGTCTCTCTTAGTACTCTCTTTG 59.124 44.000 0.00 0.00 0.00 2.77
278 283 5.065474 CGGTCTCTCTTAGTACTCTCTTTGG 59.935 48.000 0.00 0.00 0.00 3.28
279 284 5.947566 GGTCTCTCTTAGTACTCTCTTTGGT 59.052 44.000 0.00 0.00 0.00 3.67
280 285 6.434965 GGTCTCTCTTAGTACTCTCTTTGGTT 59.565 42.308 0.00 0.00 0.00 3.67
281 286 7.362315 GGTCTCTCTTAGTACTCTCTTTGGTTC 60.362 44.444 0.00 0.00 0.00 3.62
282 287 7.392393 GTCTCTCTTAGTACTCTCTTTGGTTCT 59.608 40.741 0.00 0.00 0.00 3.01
283 288 7.945664 TCTCTCTTAGTACTCTCTTTGGTTCTT 59.054 37.037 0.00 0.00 0.00 2.52
284 289 8.480133 TCTCTTAGTACTCTCTTTGGTTCTTT 57.520 34.615 0.00 0.00 0.00 2.52
285 290 8.925338 TCTCTTAGTACTCTCTTTGGTTCTTTT 58.075 33.333 0.00 0.00 0.00 2.27
287 292 9.978044 TCTTAGTACTCTCTTTGGTTCTTTTAC 57.022 33.333 0.00 0.00 0.00 2.01
288 293 9.984190 CTTAGTACTCTCTTTGGTTCTTTTACT 57.016 33.333 0.00 0.00 0.00 2.24
291 296 9.110502 AGTACTCTCTTTGGTTCTTTTACTTTG 57.889 33.333 0.00 0.00 0.00 2.77
292 297 6.796426 ACTCTCTTTGGTTCTTTTACTTTGC 58.204 36.000 0.00 0.00 0.00 3.68
293 298 6.377146 ACTCTCTTTGGTTCTTTTACTTTGCA 59.623 34.615 0.00 0.00 0.00 4.08
294 299 7.068716 ACTCTCTTTGGTTCTTTTACTTTGCAT 59.931 33.333 0.00 0.00 0.00 3.96
295 300 8.458573 TCTCTTTGGTTCTTTTACTTTGCATA 57.541 30.769 0.00 0.00 0.00 3.14
296 301 9.077885 TCTCTTTGGTTCTTTTACTTTGCATAT 57.922 29.630 0.00 0.00 0.00 1.78
312 317 9.236006 ACTTTGCATATAAGAATTGTCTGAAGT 57.764 29.630 3.66 0.00 33.05 3.01
313 318 9.713740 CTTTGCATATAAGAATTGTCTGAAGTC 57.286 33.333 0.00 0.00 33.05 3.01
314 319 9.453572 TTTGCATATAAGAATTGTCTGAAGTCT 57.546 29.630 0.00 0.00 33.05 3.24
315 320 8.429493 TGCATATAAGAATTGTCTGAAGTCTG 57.571 34.615 0.00 0.00 33.05 3.51
316 321 8.043113 TGCATATAAGAATTGTCTGAAGTCTGT 58.957 33.333 0.00 0.00 33.05 3.41
317 322 9.534565 GCATATAAGAATTGTCTGAAGTCTGTA 57.465 33.333 0.00 0.00 33.05 2.74
322 327 8.738645 AAGAATTGTCTGAAGTCTGTAAGTTT 57.261 30.769 0.00 0.00 33.05 2.66
323 328 8.147642 AGAATTGTCTGAAGTCTGTAAGTTTG 57.852 34.615 0.00 0.00 30.22 2.93
324 329 7.987458 AGAATTGTCTGAAGTCTGTAAGTTTGA 59.013 33.333 0.00 0.00 30.22 2.69
325 330 6.903883 TTGTCTGAAGTCTGTAAGTTTGAC 57.096 37.500 0.00 0.00 33.76 3.18
326 331 5.357257 TGTCTGAAGTCTGTAAGTTTGACC 58.643 41.667 0.00 0.00 33.76 4.02
327 332 5.105106 TGTCTGAAGTCTGTAAGTTTGACCA 60.105 40.000 0.00 0.00 33.76 4.02
328 333 5.992217 GTCTGAAGTCTGTAAGTTTGACCAT 59.008 40.000 0.00 0.00 33.76 3.55
329 334 7.152645 GTCTGAAGTCTGTAAGTTTGACCATA 58.847 38.462 0.00 0.00 33.76 2.74
330 335 7.819900 GTCTGAAGTCTGTAAGTTTGACCATAT 59.180 37.037 0.00 0.00 33.76 1.78
331 336 8.375506 TCTGAAGTCTGTAAGTTTGACCATATT 58.624 33.333 0.00 0.00 33.76 1.28
332 337 8.918202 TGAAGTCTGTAAGTTTGACCATATTT 57.082 30.769 0.00 0.00 33.76 1.40
395 400 7.974675 ACAATATGAAAACTAAGGTCATGACG 58.025 34.615 19.33 8.24 34.01 4.35
396 401 4.946784 ATGAAAACTAAGGTCATGACGC 57.053 40.909 19.33 12.27 30.84 5.19
397 402 3.734463 TGAAAACTAAGGTCATGACGCA 58.266 40.909 19.33 6.17 0.00 5.24
398 403 4.323417 TGAAAACTAAGGTCATGACGCAT 58.677 39.130 19.33 10.33 0.00 4.73
399 404 4.391830 TGAAAACTAAGGTCATGACGCATC 59.608 41.667 19.33 5.77 0.00 3.91
400 405 3.895232 AACTAAGGTCATGACGCATCT 57.105 42.857 19.33 8.07 0.00 2.90
401 406 5.339008 AAACTAAGGTCATGACGCATCTA 57.661 39.130 19.33 5.51 0.00 1.98
402 407 5.339008 AACTAAGGTCATGACGCATCTAA 57.661 39.130 19.33 0.39 0.00 2.10
403 408 4.683832 ACTAAGGTCATGACGCATCTAAC 58.316 43.478 19.33 3.21 0.00 2.34
404 409 2.209838 AGGTCATGACGCATCTAACG 57.790 50.000 19.33 0.00 0.00 3.18
406 411 2.094182 AGGTCATGACGCATCTAACGTT 60.094 45.455 19.33 5.88 45.24 3.99
407 412 2.029244 GGTCATGACGCATCTAACGTTG 59.971 50.000 19.33 0.97 45.24 4.10
408 413 2.666508 GTCATGACGCATCTAACGTTGT 59.333 45.455 11.99 0.00 45.24 3.32
409 414 3.122948 GTCATGACGCATCTAACGTTGTT 59.877 43.478 11.99 0.00 45.24 2.83
410 415 3.122780 TCATGACGCATCTAACGTTGTTG 59.877 43.478 11.99 6.81 45.24 3.33
411 416 2.745102 TGACGCATCTAACGTTGTTGA 58.255 42.857 11.99 6.98 45.24 3.18
412 417 3.322369 TGACGCATCTAACGTTGTTGAT 58.678 40.909 11.99 9.04 45.24 2.57
413 418 3.743911 TGACGCATCTAACGTTGTTGATT 59.256 39.130 11.99 0.00 45.24 2.57
414 419 4.212425 TGACGCATCTAACGTTGTTGATTT 59.788 37.500 11.99 0.00 45.24 2.17
415 420 4.708601 ACGCATCTAACGTTGTTGATTTC 58.291 39.130 11.99 5.65 41.93 2.17
416 421 4.212425 ACGCATCTAACGTTGTTGATTTCA 59.788 37.500 11.99 0.00 41.93 2.69
417 422 4.549599 CGCATCTAACGTTGTTGATTTCAC 59.450 41.667 11.99 1.74 0.00 3.18
418 423 5.448438 GCATCTAACGTTGTTGATTTCACA 58.552 37.500 11.99 0.00 0.00 3.58
419 424 6.086222 GCATCTAACGTTGTTGATTTCACAT 58.914 36.000 11.99 0.00 0.00 3.21
420 425 6.582295 GCATCTAACGTTGTTGATTTCACATT 59.418 34.615 11.99 0.00 0.00 2.71
421 426 7.748683 GCATCTAACGTTGTTGATTTCACATTA 59.251 33.333 11.99 0.00 0.00 1.90
422 427 9.773328 CATCTAACGTTGTTGATTTCACATTAT 57.227 29.630 11.99 0.00 0.00 1.28
423 428 9.773328 ATCTAACGTTGTTGATTTCACATTATG 57.227 29.630 11.99 0.00 0.00 1.90
424 429 8.994170 TCTAACGTTGTTGATTTCACATTATGA 58.006 29.630 11.99 0.00 34.65 2.15
425 430 9.605955 CTAACGTTGTTGATTTCACATTATGAA 57.394 29.630 11.99 0.00 45.92 2.57
427 432 8.451687 ACGTTGTTGATTTCACATTATGAATG 57.548 30.769 0.00 0.00 46.80 2.67
469 474 6.937436 AAATTGGTCAAAGTTTACGAGTCT 57.063 33.333 0.00 0.00 0.00 3.24
470 475 6.937436 AATTGGTCAAAGTTTACGAGTCTT 57.063 33.333 0.00 0.00 0.00 3.01
471 476 5.728351 TTGGTCAAAGTTTACGAGTCTTG 57.272 39.130 0.00 0.00 0.00 3.02
472 477 5.013568 TGGTCAAAGTTTACGAGTCTTGA 57.986 39.130 0.00 0.00 0.00 3.02
473 478 4.807304 TGGTCAAAGTTTACGAGTCTTGAC 59.193 41.667 9.52 9.52 0.00 3.18
474 479 5.048507 GGTCAAAGTTTACGAGTCTTGACT 58.951 41.667 14.94 2.59 0.00 3.41
475 480 5.522824 GGTCAAAGTTTACGAGTCTTGACTT 59.477 40.000 14.94 6.72 0.00 3.01
476 481 6.292221 GGTCAAAGTTTACGAGTCTTGACTTC 60.292 42.308 14.94 0.00 0.00 3.01
477 482 6.255020 GTCAAAGTTTACGAGTCTTGACTTCA 59.745 38.462 4.67 0.00 0.00 3.02
478 483 6.475727 TCAAAGTTTACGAGTCTTGACTTCAG 59.524 38.462 4.67 3.19 0.00 3.02
479 484 5.769484 AGTTTACGAGTCTTGACTTCAGA 57.231 39.130 4.67 0.00 0.00 3.27
480 485 5.521544 AGTTTACGAGTCTTGACTTCAGAC 58.478 41.667 4.67 0.00 0.00 3.51
481 486 5.067413 AGTTTACGAGTCTTGACTTCAGACA 59.933 40.000 4.67 0.00 35.23 3.41
482 487 3.634568 ACGAGTCTTGACTTCAGACAG 57.365 47.619 4.67 0.00 35.23 3.51
483 488 3.215151 ACGAGTCTTGACTTCAGACAGA 58.785 45.455 4.67 0.00 35.23 3.41
484 489 3.823873 ACGAGTCTTGACTTCAGACAGAT 59.176 43.478 4.67 0.00 35.23 2.90
485 490 4.083003 ACGAGTCTTGACTTCAGACAGATC 60.083 45.833 4.67 0.00 35.23 2.75
486 491 4.155826 CGAGTCTTGACTTCAGACAGATCT 59.844 45.833 4.67 0.00 35.23 2.75
487 492 5.335583 CGAGTCTTGACTTCAGACAGATCTT 60.336 44.000 4.67 0.00 35.23 2.40
488 493 6.128145 CGAGTCTTGACTTCAGACAGATCTTA 60.128 42.308 4.67 0.00 35.23 2.10
489 494 7.415095 CGAGTCTTGACTTCAGACAGATCTTAT 60.415 40.741 4.67 0.00 35.23 1.73
490 495 8.815565 AGTCTTGACTTCAGACAGATCTTATA 57.184 34.615 0.00 0.00 35.23 0.98
491 496 9.420118 AGTCTTGACTTCAGACAGATCTTATAT 57.580 33.333 0.00 0.00 35.23 0.86
492 497 9.462174 GTCTTGACTTCAGACAGATCTTATATG 57.538 37.037 0.00 0.00 30.42 1.78
493 498 9.194972 TCTTGACTTCAGACAGATCTTATATGT 57.805 33.333 0.00 0.00 37.43 2.29
512 517 9.563748 TTATATGTAAACTAAAAAGGATCGGGG 57.436 33.333 0.00 0.00 0.00 5.73
513 518 4.591929 TGTAAACTAAAAAGGATCGGGGG 58.408 43.478 0.00 0.00 0.00 5.40
534 539 4.506095 GGGAGTACACACAAAACCACCTAT 60.506 45.833 0.00 0.00 0.00 2.57
535 540 5.280113 GGGAGTACACACAAAACCACCTATA 60.280 44.000 0.00 0.00 0.00 1.31
631 636 6.935167 AGAAAGACCACAAACAAATGAAACT 58.065 32.000 0.00 0.00 0.00 2.66
638 643 5.581874 CCACAAACAAATGAAACTCAAAGCT 59.418 36.000 0.00 0.00 0.00 3.74
646 651 4.806342 TGAAACTCAAAGCTACGAAACC 57.194 40.909 0.00 0.00 0.00 3.27
648 653 4.510340 TGAAACTCAAAGCTACGAAACCTC 59.490 41.667 0.00 0.00 0.00 3.85
651 656 4.058817 ACTCAAAGCTACGAAACCTCTTG 58.941 43.478 0.00 0.00 0.00 3.02
652 657 4.058817 CTCAAAGCTACGAAACCTCTTGT 58.941 43.478 0.00 0.00 0.00 3.16
653 658 4.448210 TCAAAGCTACGAAACCTCTTGTT 58.552 39.130 0.00 0.00 39.43 2.83
703 745 6.780522 ACCAGAGAAAGAGAGAGAAAAGTAGT 59.219 38.462 0.00 0.00 0.00 2.73
704 746 7.945664 ACCAGAGAAAGAGAGAGAAAAGTAGTA 59.054 37.037 0.00 0.00 0.00 1.82
705 747 8.241367 CCAGAGAAAGAGAGAGAAAAGTAGTAC 58.759 40.741 0.00 0.00 0.00 2.73
706 748 9.010029 CAGAGAAAGAGAGAGAAAAGTAGTACT 57.990 37.037 0.00 0.00 0.00 2.73
742 784 0.890996 CAGTTGTGGGGAAGACAGGC 60.891 60.000 0.00 0.00 0.00 4.85
744 792 2.840753 TTGTGGGGAAGACAGGCCC 61.841 63.158 0.00 0.00 43.91 5.80
796 844 0.407139 CCCATCCATCCATTCCTCCC 59.593 60.000 0.00 0.00 0.00 4.30
813 861 3.557264 CCTCCCCTATAAATGGACGCTTC 60.557 52.174 0.00 0.00 0.00 3.86
814 862 2.370849 TCCCCTATAAATGGACGCTTCC 59.629 50.000 1.37 1.37 43.19 3.46
848 896 1.599576 GGCTCAACTCAGGTCTCCC 59.400 63.158 0.00 0.00 0.00 4.30
849 897 0.907230 GGCTCAACTCAGGTCTCCCT 60.907 60.000 0.00 0.00 44.02 4.20
850 898 0.534873 GCTCAACTCAGGTCTCCCTC 59.465 60.000 0.00 0.00 39.89 4.30
851 899 1.190643 CTCAACTCAGGTCTCCCTCC 58.809 60.000 0.00 0.00 39.89 4.30
852 900 0.612174 TCAACTCAGGTCTCCCTCCG 60.612 60.000 0.00 0.00 39.89 4.63
853 901 1.985116 AACTCAGGTCTCCCTCCGC 60.985 63.158 0.00 0.00 39.89 5.54
854 902 3.151022 CTCAGGTCTCCCTCCGCC 61.151 72.222 0.00 0.00 39.89 6.13
855 903 4.779733 TCAGGTCTCCCTCCGCCC 62.780 72.222 0.00 0.00 39.89 6.13
871 919 4.722700 CCCGGCCCCAAGTCACAG 62.723 72.222 0.00 0.00 0.00 3.66
966 1014 1.464198 AGAACCACCAGCCTTCCCT 60.464 57.895 0.00 0.00 0.00 4.20
967 1015 1.068352 AGAACCACCAGCCTTCCCTT 61.068 55.000 0.00 0.00 0.00 3.95
971 1019 3.330720 ACCAGCCTTCCCTTCCCG 61.331 66.667 0.00 0.00 0.00 5.14
973 1021 2.269241 CAGCCTTCCCTTCCCGAC 59.731 66.667 0.00 0.00 0.00 4.79
975 1023 4.111053 GCCTTCCCTTCCCGACCC 62.111 72.222 0.00 0.00 0.00 4.46
976 1024 3.408853 CCTTCCCTTCCCGACCCC 61.409 72.222 0.00 0.00 0.00 4.95
977 1025 2.609610 CTTCCCTTCCCGACCCCA 60.610 66.667 0.00 0.00 0.00 4.96
978 1026 2.121872 TTCCCTTCCCGACCCCAA 60.122 61.111 0.00 0.00 0.00 4.12
979 1027 2.479820 CTTCCCTTCCCGACCCCAAC 62.480 65.000 0.00 0.00 0.00 3.77
980 1028 3.253838 CCCTTCCCGACCCCAACA 61.254 66.667 0.00 0.00 0.00 3.33
981 1029 2.033602 CCTTCCCGACCCCAACAC 59.966 66.667 0.00 0.00 0.00 3.32
982 1030 2.033602 CTTCCCGACCCCAACACC 59.966 66.667 0.00 0.00 0.00 4.16
983 1031 3.894547 CTTCCCGACCCCAACACCG 62.895 68.421 0.00 0.00 0.00 4.94
1005 1053 3.157217 GACGGATCAGGCGATGGCT 62.157 63.158 0.00 0.00 39.66 4.75
1189 1266 2.040359 CTTCTCCCCCTCCCCCTC 60.040 72.222 0.00 0.00 0.00 4.30
1190 1267 3.707189 TTCTCCCCCTCCCCCTCC 61.707 72.222 0.00 0.00 0.00 4.30
1203 1280 3.775654 CCTCCCCCTGTCACGCTC 61.776 72.222 0.00 0.00 0.00 5.03
1215 1292 4.647615 ACGCTCACGCTCACGCTT 62.648 61.111 0.00 0.00 45.53 4.68
1235 1334 5.248834 GCTTACGCGTAGAAATCTTTTCTG 58.751 41.667 19.61 0.00 0.00 3.02
1288 1393 9.980780 GAAATCTTCTTCTCCTCTTTTATTTCG 57.019 33.333 0.00 0.00 0.00 3.46
1289 1394 6.969828 TCTTCTTCTCCTCTTTTATTTCGC 57.030 37.500 0.00 0.00 0.00 4.70
1311 1416 2.285024 CCCCCACATGTTGGCCTTG 61.285 63.158 10.52 0.00 45.37 3.61
1358 1463 3.060615 CACCAGCTTCTGCCTGCC 61.061 66.667 0.00 0.00 40.80 4.85
1359 1464 3.255397 ACCAGCTTCTGCCTGCCT 61.255 61.111 0.00 0.00 40.80 4.75
1426 1537 1.450848 CTGCATGGATCACGCCTGT 60.451 57.895 0.00 0.00 0.00 4.00
1463 1578 1.796151 CCACGCTGGTTGCATAGTG 59.204 57.895 0.00 0.00 43.06 2.74
1465 1580 2.040544 ACGCTGGTTGCATAGTGGC 61.041 57.895 10.26 1.69 43.06 5.01
1466 1581 1.746615 CGCTGGTTGCATAGTGGCT 60.747 57.895 0.00 0.00 43.06 4.75
1467 1582 1.709147 CGCTGGTTGCATAGTGGCTC 61.709 60.000 0.00 0.00 43.06 4.70
1468 1583 1.709147 GCTGGTTGCATAGTGGCTCG 61.709 60.000 0.00 0.00 42.31 5.03
1539 1660 1.003464 TGCTAGAAGTTGCTGCATCCA 59.997 47.619 1.84 0.00 0.00 3.41
1555 1676 3.454375 CATCCATTTGCCATTTCTGCTC 58.546 45.455 0.00 0.00 0.00 4.26
1556 1677 2.811410 TCCATTTGCCATTTCTGCTCT 58.189 42.857 0.00 0.00 0.00 4.09
1561 1682 0.107993 TGCCATTTCTGCTCTCTCCG 60.108 55.000 0.00 0.00 0.00 4.63
1571 1692 0.528684 GCTCTCTCCGAAATGGTCCG 60.529 60.000 0.00 0.00 39.52 4.79
1572 1693 0.818296 CTCTCTCCGAAATGGTCCGT 59.182 55.000 0.00 0.00 39.52 4.69
1573 1694 0.815734 TCTCTCCGAAATGGTCCGTC 59.184 55.000 0.00 0.00 39.52 4.79
1574 1695 0.530744 CTCTCCGAAATGGTCCGTCA 59.469 55.000 0.00 0.00 39.52 4.35
1575 1696 1.137086 CTCTCCGAAATGGTCCGTCAT 59.863 52.381 0.00 0.00 39.52 3.06
1576 1697 1.134818 TCTCCGAAATGGTCCGTCATG 60.135 52.381 0.00 0.00 39.52 3.07
1577 1698 0.107897 TCCGAAATGGTCCGTCATGG 60.108 55.000 0.00 0.00 39.52 3.66
1578 1699 1.714899 CCGAAATGGTCCGTCATGGC 61.715 60.000 0.00 0.00 37.80 4.40
1579 1700 0.744414 CGAAATGGTCCGTCATGGCT 60.744 55.000 0.00 0.00 37.80 4.75
1580 1701 0.734889 GAAATGGTCCGTCATGGCTG 59.265 55.000 0.00 0.00 37.80 4.85
1581 1702 0.680921 AAATGGTCCGTCATGGCTGG 60.681 55.000 0.00 0.00 37.80 4.85
1598 1719 0.327924 TGGGTCATGGTCATGGTCAC 59.672 55.000 10.61 6.70 39.24 3.67
1656 1781 5.343325 GGAACGATCTTTCATGTTTTGCTTC 59.657 40.000 13.36 0.00 0.00 3.86
1657 1782 5.695851 ACGATCTTTCATGTTTTGCTTCT 57.304 34.783 0.00 0.00 0.00 2.85
1658 1783 6.076981 ACGATCTTTCATGTTTTGCTTCTT 57.923 33.333 0.00 0.00 0.00 2.52
1659 1784 5.916883 ACGATCTTTCATGTTTTGCTTCTTG 59.083 36.000 0.00 0.00 0.00 3.02
1660 1785 5.164119 CGATCTTTCATGTTTTGCTTCTTGC 60.164 40.000 0.00 0.00 43.25 4.01
1712 1888 6.650390 CACAAGAAATCCCACCTTTAATTTGG 59.350 38.462 0.00 0.00 0.00 3.28
1851 2027 4.142160 GGGTAACTTCATTTCATTGCCTCC 60.142 45.833 0.00 0.00 0.00 4.30
1853 2029 2.460669 ACTTCATTTCATTGCCTCCCC 58.539 47.619 0.00 0.00 0.00 4.81
1854 2030 2.225343 ACTTCATTTCATTGCCTCCCCA 60.225 45.455 0.00 0.00 0.00 4.96
1855 2031 1.851304 TCATTTCATTGCCTCCCCAC 58.149 50.000 0.00 0.00 0.00 4.61
1857 2033 0.684153 ATTTCATTGCCTCCCCACCG 60.684 55.000 0.00 0.00 0.00 4.94
1858 2034 2.075355 TTTCATTGCCTCCCCACCGT 62.075 55.000 0.00 0.00 0.00 4.83
1859 2035 1.202099 TTCATTGCCTCCCCACCGTA 61.202 55.000 0.00 0.00 0.00 4.02
1860 2036 0.986019 TCATTGCCTCCCCACCGTAT 60.986 55.000 0.00 0.00 0.00 3.06
1861 2037 0.762418 CATTGCCTCCCCACCGTATA 59.238 55.000 0.00 0.00 0.00 1.47
1862 2038 1.351017 CATTGCCTCCCCACCGTATAT 59.649 52.381 0.00 0.00 0.00 0.86
1863 2039 1.053424 TTGCCTCCCCACCGTATATC 58.947 55.000 0.00 0.00 0.00 1.63
1864 2040 0.105401 TGCCTCCCCACCGTATATCA 60.105 55.000 0.00 0.00 0.00 2.15
1865 2041 1.276622 GCCTCCCCACCGTATATCAT 58.723 55.000 0.00 0.00 0.00 2.45
1866 2042 2.225420 TGCCTCCCCACCGTATATCATA 60.225 50.000 0.00 0.00 0.00 2.15
1867 2043 2.431057 GCCTCCCCACCGTATATCATAG 59.569 54.545 0.00 0.00 0.00 2.23
1868 2044 2.431057 CCTCCCCACCGTATATCATAGC 59.569 54.545 0.00 0.00 0.00 2.97
1869 2045 3.096852 CTCCCCACCGTATATCATAGCA 58.903 50.000 0.00 0.00 0.00 3.49
1870 2046 3.706594 CTCCCCACCGTATATCATAGCAT 59.293 47.826 0.00 0.00 0.00 3.79
1871 2047 4.874199 TCCCCACCGTATATCATAGCATA 58.126 43.478 0.00 0.00 0.00 3.14
1872 2048 4.893524 TCCCCACCGTATATCATAGCATAG 59.106 45.833 0.00 0.00 0.00 2.23
1876 2052 5.508153 CCACCGTATATCATAGCATAGCTCC 60.508 48.000 0.00 0.00 40.44 4.70
1880 2056 5.048364 CGTATATCATAGCATAGCTCCCTCC 60.048 48.000 0.00 0.00 40.44 4.30
1903 2079 5.389520 CCTCTCTCTCTCTCTCTCTCTCTA 58.610 50.000 0.00 0.00 0.00 2.43
1981 2188 1.079503 CCTGCTCCTTCTTTGTACGC 58.920 55.000 0.00 0.00 0.00 4.42
2024 2236 4.057406 TGGTTTGGTTTGCTTTGATCTG 57.943 40.909 0.00 0.00 0.00 2.90
2080 2293 2.161855 AGGCATTTTGAATGCGTCTGA 58.838 42.857 16.67 0.00 45.41 3.27
2157 2370 1.822990 CTGCATGCTCCAAATGGACTT 59.177 47.619 20.33 0.00 39.78 3.01
2158 2371 1.820519 TGCATGCTCCAAATGGACTTC 59.179 47.619 20.33 0.00 39.78 3.01
2207 2425 5.078256 TCTCGTCCCTCCCTCTAATTATTC 58.922 45.833 0.00 0.00 0.00 1.75
2213 2431 4.783763 CCCTCCCTCTAATTATTCCCTACC 59.216 50.000 0.00 0.00 0.00 3.18
2214 2432 5.412384 CCTCCCTCTAATTATTCCCTACCA 58.588 45.833 0.00 0.00 0.00 3.25
2215 2433 5.485708 CCTCCCTCTAATTATTCCCTACCAG 59.514 48.000 0.00 0.00 0.00 4.00
2216 2434 5.412384 TCCCTCTAATTATTCCCTACCAGG 58.588 45.833 0.00 0.00 34.30 4.45
2252 2470 2.170187 AGTGCTCATTCAGTCCATCTCC 59.830 50.000 0.00 0.00 0.00 3.71
2253 2471 2.093288 GTGCTCATTCAGTCCATCTCCA 60.093 50.000 0.00 0.00 0.00 3.86
2281 2501 1.860950 CTATACATGCACAGCACGGTC 59.139 52.381 0.00 0.00 43.04 4.79
2289 2509 2.510238 CAGCACGGTCCAGCTAGC 60.510 66.667 6.62 6.62 39.50 3.42
2290 2510 3.775654 AGCACGGTCCAGCTAGCC 61.776 66.667 12.13 0.00 39.78 3.93
2291 2511 4.082523 GCACGGTCCAGCTAGCCA 62.083 66.667 12.13 0.00 0.00 4.75
2292 2512 2.185350 CACGGTCCAGCTAGCCAG 59.815 66.667 12.13 4.25 0.00 4.85
2293 2513 2.283966 ACGGTCCAGCTAGCCAGT 60.284 61.111 12.13 0.00 0.00 4.00
2294 2514 1.000019 ACGGTCCAGCTAGCCAGTA 60.000 57.895 12.13 0.00 0.00 2.74
2295 2515 1.038130 ACGGTCCAGCTAGCCAGTAG 61.038 60.000 12.13 1.52 0.00 2.57
2300 2520 2.882137 GTCCAGCTAGCCAGTAGTAGAG 59.118 54.545 12.13 0.00 0.00 2.43
2304 2524 2.242708 AGCTAGCCAGTAGTAGAGGTGT 59.757 50.000 12.13 0.00 0.00 4.16
2314 2534 1.544691 AGTAGAGGTGTTGTGCCTACG 59.455 52.381 0.00 0.00 36.29 3.51
2334 2558 1.404843 CTAGGAGGAGTAGTGGGCAC 58.595 60.000 0.00 0.00 0.00 5.01
2401 2630 3.923017 ACTGTTTGACTGCTTTATGCC 57.077 42.857 0.00 0.00 42.00 4.40
2404 2633 3.976169 TGTTTGACTGCTTTATGCCAAC 58.024 40.909 0.00 0.00 42.00 3.77
2497 2726 3.073209 AGAGGTGAGCGATCCATCTACTA 59.927 47.826 0.00 0.00 0.00 1.82
2498 2727 3.150767 AGGTGAGCGATCCATCTACTAC 58.849 50.000 0.00 0.00 0.00 2.73
2499 2728 3.150767 GGTGAGCGATCCATCTACTACT 58.849 50.000 0.00 0.00 0.00 2.57
2500 2729 3.189702 GGTGAGCGATCCATCTACTACTC 59.810 52.174 0.00 0.00 0.00 2.59
2501 2730 4.069304 GTGAGCGATCCATCTACTACTCT 58.931 47.826 0.00 0.00 0.00 3.24
2502 2731 5.239351 GTGAGCGATCCATCTACTACTCTA 58.761 45.833 0.00 0.00 0.00 2.43
2503 2732 5.121142 GTGAGCGATCCATCTACTACTCTAC 59.879 48.000 0.00 0.00 0.00 2.59
2504 2733 5.012251 TGAGCGATCCATCTACTACTCTACT 59.988 44.000 0.00 0.00 0.00 2.57
2518 2757 2.239907 ACTCTACTCCCCCATTTGCTTC 59.760 50.000 0.00 0.00 0.00 3.86
2519 2758 2.239654 CTCTACTCCCCCATTTGCTTCA 59.760 50.000 0.00 0.00 0.00 3.02
2520 2759 2.852449 TCTACTCCCCCATTTGCTTCAT 59.148 45.455 0.00 0.00 0.00 2.57
2521 2760 1.856629 ACTCCCCCATTTGCTTCATG 58.143 50.000 0.00 0.00 0.00 3.07
2630 2869 1.081906 CATGAATATGGTGCGCCGC 60.082 57.895 12.58 0.00 37.67 6.53
2717 2961 1.479389 CCTTGCCTTTGGACTTCACCT 60.479 52.381 0.00 0.00 0.00 4.00
2718 2962 1.882623 CTTGCCTTTGGACTTCACCTC 59.117 52.381 0.00 0.00 0.00 3.85
2719 2963 0.843309 TGCCTTTGGACTTCACCTCA 59.157 50.000 0.00 0.00 0.00 3.86
2720 2964 1.239347 GCCTTTGGACTTCACCTCAC 58.761 55.000 0.00 0.00 0.00 3.51
2721 2965 1.897560 CCTTTGGACTTCACCTCACC 58.102 55.000 0.00 0.00 0.00 4.02
2739 2983 1.692519 ACCGGATATGCAACCTACTCC 59.307 52.381 9.46 0.00 0.00 3.85
2740 2984 1.971357 CCGGATATGCAACCTACTCCT 59.029 52.381 0.00 0.00 0.00 3.69
2741 2985 2.368875 CCGGATATGCAACCTACTCCTT 59.631 50.000 0.00 0.00 0.00 3.36
2742 2986 3.393800 CGGATATGCAACCTACTCCTTG 58.606 50.000 0.00 0.00 0.00 3.61
2800 3061 5.537300 ACTACCACCTATAGCTGAACATG 57.463 43.478 0.00 0.00 0.00 3.21
2802 3063 3.384168 ACCACCTATAGCTGAACATGGA 58.616 45.455 13.29 0.00 0.00 3.41
2816 3082 6.538742 GCTGAACATGGATAGCACTTTTACTA 59.461 38.462 11.08 0.00 36.24 1.82
2817 3083 7.254590 GCTGAACATGGATAGCACTTTTACTAG 60.255 40.741 11.08 0.00 36.24 2.57
2818 3084 7.620880 TGAACATGGATAGCACTTTTACTAGT 58.379 34.615 0.00 0.00 0.00 2.57
2879 3149 9.924010 AGTACTACTATGGAGAAGTAGAAATGT 57.076 33.333 15.25 0.00 46.20 2.71
2880 3150 9.953697 GTACTACTATGGAGAAGTAGAAATGTG 57.046 37.037 15.25 0.00 46.20 3.21
2881 3151 8.596781 ACTACTATGGAGAAGTAGAAATGTGT 57.403 34.615 15.25 0.00 46.20 3.72
2882 3152 8.688151 ACTACTATGGAGAAGTAGAAATGTGTC 58.312 37.037 15.25 0.00 46.20 3.67
2883 3153 7.726033 ACTATGGAGAAGTAGAAATGTGTCT 57.274 36.000 0.00 0.00 0.00 3.41
2884 3154 8.824756 ACTATGGAGAAGTAGAAATGTGTCTA 57.175 34.615 0.00 0.00 0.00 2.59
2885 3155 8.908903 ACTATGGAGAAGTAGAAATGTGTCTAG 58.091 37.037 0.00 0.00 30.70 2.43
2886 3156 5.967088 TGGAGAAGTAGAAATGTGTCTAGC 58.033 41.667 0.00 0.00 30.70 3.42
2887 3157 5.717178 TGGAGAAGTAGAAATGTGTCTAGCT 59.283 40.000 0.00 0.00 30.70 3.32
2888 3158 6.039616 GGAGAAGTAGAAATGTGTCTAGCTG 58.960 44.000 0.00 0.00 30.70 4.24
2889 3159 6.127591 GGAGAAGTAGAAATGTGTCTAGCTGA 60.128 42.308 0.00 0.00 30.70 4.26
2890 3160 7.233389 AGAAGTAGAAATGTGTCTAGCTGAA 57.767 36.000 0.00 0.00 30.70 3.02
2891 3161 7.093992 AGAAGTAGAAATGTGTCTAGCTGAAC 58.906 38.462 0.00 0.00 30.70 3.18
2892 3162 6.346477 AGTAGAAATGTGTCTAGCTGAACA 57.654 37.500 0.00 0.00 30.70 3.18
2893 3163 6.159988 AGTAGAAATGTGTCTAGCTGAACAC 58.840 40.000 20.56 20.56 30.70 3.32
2987 3257 1.388547 ACAGAAATGTGTGTGCGGTT 58.611 45.000 0.00 0.00 28.18 4.44
2992 3262 3.880490 AGAAATGTGTGTGCGGTTCTTTA 59.120 39.130 0.00 0.00 0.00 1.85
3052 3326 5.587289 TCTTTCGTTGCATTTGCTAGTTTT 58.413 33.333 3.94 0.00 42.66 2.43
3080 3354 6.542821 AGAGGGTTTTGAACACATGATCTAA 58.457 36.000 0.00 0.00 37.23 2.10
3106 3380 1.818060 AGCTGAAATGCGCAACCATTA 59.182 42.857 17.11 0.00 34.50 1.90
3109 3383 3.000523 GCTGAAATGCGCAACCATTAATG 59.999 43.478 17.11 8.58 34.50 1.90
3125 3399 5.221048 CCATTAATGGTACTGCCTGCTTAAC 60.221 44.000 24.12 0.00 43.05 2.01
3178 3452 0.035915 GAGAGCCTGTTGGGGAAGTC 60.036 60.000 0.00 0.00 35.12 3.01
3345 3623 5.947566 TGGATTCTTCAATGCAAGATCTGAA 59.052 36.000 0.00 0.00 37.40 3.02
3352 3630 8.242053 TCTTCAATGCAAGATCTGAAAAATCTC 58.758 33.333 0.00 0.00 32.29 2.75
3410 3691 2.487428 CTGCTCGAGGTCCTCACG 59.513 66.667 19.15 9.56 0.00 4.35
3485 3772 4.180817 TGTAGCATCAACAATTCGATCGT 58.819 39.130 15.94 0.00 0.00 3.73
3604 3891 4.216472 GGCTATCCAGGCAATTAGTTTAGC 59.784 45.833 0.00 0.00 46.44 3.09
3615 3902 5.390613 CAATTAGTTTAGCCCAAAGTCGTG 58.609 41.667 0.00 0.00 31.99 4.35
3616 3903 2.632987 AGTTTAGCCCAAAGTCGTGT 57.367 45.000 0.00 0.00 0.00 4.49
3671 3960 1.117142 CCCATCCCATGTGATTGGCC 61.117 60.000 0.00 0.00 35.29 5.36
3791 4090 7.621991 CGATCCGCAATCTCCATTATTTATAC 58.378 38.462 0.00 0.00 31.68 1.47
3792 4091 7.492669 CGATCCGCAATCTCCATTATTTATACT 59.507 37.037 0.00 0.00 31.68 2.12
3793 4092 7.905604 TCCGCAATCTCCATTATTTATACTG 57.094 36.000 0.00 0.00 0.00 2.74
3794 4093 7.450074 TCCGCAATCTCCATTATTTATACTGT 58.550 34.615 0.00 0.00 0.00 3.55
3795 4094 8.590204 TCCGCAATCTCCATTATTTATACTGTA 58.410 33.333 0.00 0.00 0.00 2.74
3888 4187 6.953101 TGTATTGTTGGCATCTAAGGTAGAA 58.047 36.000 0.00 0.00 38.50 2.10
3945 4244 8.047310 AGTGGACGGTTTGAATAATCTCTTTAT 58.953 33.333 0.00 0.00 31.61 1.40
3977 4278 4.315803 ACGAATGTTCTCCACTTCGATTT 58.684 39.130 10.13 0.00 42.18 2.17
4158 4468 7.983307 ACAGTATTACAGTACAGTAGCAGTAC 58.017 38.462 0.00 0.00 41.59 2.73
4159 4469 7.609146 ACAGTATTACAGTACAGTAGCAGTACA 59.391 37.037 6.30 0.00 43.24 2.90
4166 4479 5.744345 CAGTACAGTAGCAGTACACATTAGC 59.256 44.000 6.30 0.00 43.24 3.09
4167 4480 4.801330 ACAGTAGCAGTACACATTAGCA 57.199 40.909 0.00 0.00 0.00 3.49
4168 4481 4.748892 ACAGTAGCAGTACACATTAGCAG 58.251 43.478 0.00 0.00 0.00 4.24
4169 4482 3.553511 CAGTAGCAGTACACATTAGCAGC 59.446 47.826 0.00 0.00 0.00 5.25
4218 4531 6.122277 TGATCTCTTTTGGTGGATATTGACC 58.878 40.000 0.00 0.00 0.00 4.02
4444 4761 4.386049 GTCAGTGTGTTGACATGTACTAGC 59.614 45.833 0.00 0.00 45.32 3.42
4615 4932 3.472652 AGTAACATCTGACCGTGCAAAA 58.527 40.909 0.00 0.00 0.00 2.44
4737 5054 1.378382 TGGTGCGGTTGATGATGGG 60.378 57.895 0.00 0.00 0.00 4.00
4738 5055 1.077787 GGTGCGGTTGATGATGGGA 60.078 57.895 0.00 0.00 0.00 4.37
4763 5080 5.064441 TCTTTTGGTCGTAGCTTAGGTAC 57.936 43.478 11.16 11.16 33.76 3.34
4770 5087 5.122519 GGTCGTAGCTTAGGTACTAGAAGT 58.877 45.833 17.73 0.00 44.25 3.01
4772 5089 6.423604 GGTCGTAGCTTAGGTACTAGAAGTAG 59.576 46.154 17.73 2.14 44.25 2.57
4773 5090 7.206687 GTCGTAGCTTAGGTACTAGAAGTAGA 58.793 42.308 17.73 4.25 44.25 2.59
4774 5091 7.708752 GTCGTAGCTTAGGTACTAGAAGTAGAA 59.291 40.741 17.73 0.00 44.25 2.10
4775 5092 7.925483 TCGTAGCTTAGGTACTAGAAGTAGAAG 59.075 40.741 17.73 0.44 44.25 2.85
4801 5118 4.158394 AGGGATTGCATGTACAAATGTGTC 59.842 41.667 0.00 0.00 39.30 3.67
4835 5152 3.365364 GCAGCAGATGTGTGTTCCTTAAC 60.365 47.826 0.00 0.00 36.07 2.01
4869 5186 1.007580 GGGAAAATTCGTCTCGCTCC 58.992 55.000 0.00 0.00 0.00 4.70
4897 5214 0.179166 CTGTTTGCTTGCACGTGTGT 60.179 50.000 18.38 0.00 0.00 3.72
4910 5227 0.737367 CGTGTGTGTCGCTCATGGAT 60.737 55.000 0.00 0.00 0.00 3.41
4937 5254 5.177881 TGTGCAAACAAATGATGATTCAAGC 59.822 36.000 0.00 0.00 34.96 4.01
4941 5258 4.100707 ACAAATGATGATTCAAGCCGTG 57.899 40.909 0.00 0.00 34.96 4.94
4942 5259 3.758023 ACAAATGATGATTCAAGCCGTGA 59.242 39.130 0.00 0.00 34.96 4.35
4943 5260 4.400251 ACAAATGATGATTCAAGCCGTGAT 59.600 37.500 0.00 0.00 35.70 3.06
4959 5276 4.227177 CGTGATAACGGAAGAAACGAAG 57.773 45.455 0.00 0.00 34.93 3.79
4978 5295 0.310854 GTGTTTGTAGGCCAGTGTGC 59.689 55.000 5.01 0.00 0.00 4.57
4985 5302 2.269241 GGCCAGTGTGCCCTAGAC 59.731 66.667 10.60 0.00 46.11 2.59
4986 5303 2.592993 GGCCAGTGTGCCCTAGACA 61.593 63.158 10.60 0.00 46.11 3.41
4987 5304 1.078848 GCCAGTGTGCCCTAGACAG 60.079 63.158 0.00 0.00 0.00 3.51
4988 5305 1.078848 CCAGTGTGCCCTAGACAGC 60.079 63.158 0.00 0.00 0.00 4.40
4989 5306 1.548357 CCAGTGTGCCCTAGACAGCT 61.548 60.000 0.00 0.00 0.00 4.24
4990 5307 1.186200 CAGTGTGCCCTAGACAGCTA 58.814 55.000 0.00 0.00 0.00 3.32
4991 5308 1.135915 CAGTGTGCCCTAGACAGCTAG 59.864 57.143 0.00 0.00 43.08 3.42
5047 5364 1.303317 GTGGAAGGGGCACATCGTT 60.303 57.895 0.00 0.00 0.00 3.85
5048 5365 0.893727 GTGGAAGGGGCACATCGTTT 60.894 55.000 0.00 0.00 0.00 3.60
5066 5383 0.529555 TTGTGCGCTTTTGGAAAGCC 60.530 50.000 17.01 11.48 40.02 4.35
5129 5450 2.284405 GGACCTGTCCCTCCCGAA 60.284 66.667 4.93 0.00 43.94 4.30
5130 5451 2.359967 GGACCTGTCCCTCCCGAAG 61.360 68.421 4.93 0.00 43.94 3.79
5161 5498 0.378962 GAGAGGTCCGTGTCGAGATG 59.621 60.000 0.00 0.00 0.00 2.90
5267 5640 3.028366 GCACGCGCTTCCTTCCTTC 62.028 63.158 5.73 0.00 34.30 3.46
5268 5641 1.374758 CACGCGCTTCCTTCCTTCT 60.375 57.895 5.73 0.00 0.00 2.85
5269 5642 0.951040 CACGCGCTTCCTTCCTTCTT 60.951 55.000 5.73 0.00 0.00 2.52
5270 5643 0.250338 ACGCGCTTCCTTCCTTCTTT 60.250 50.000 5.73 0.00 0.00 2.52
5271 5644 0.444260 CGCGCTTCCTTCCTTCTTTC 59.556 55.000 5.56 0.00 0.00 2.62
5272 5645 1.814793 GCGCTTCCTTCCTTCTTTCT 58.185 50.000 0.00 0.00 0.00 2.52
5273 5646 1.735018 GCGCTTCCTTCCTTCTTTCTC 59.265 52.381 0.00 0.00 0.00 2.87
5274 5647 2.614229 GCGCTTCCTTCCTTCTTTCTCT 60.614 50.000 0.00 0.00 0.00 3.10
5275 5648 3.258228 CGCTTCCTTCCTTCTTTCTCTC 58.742 50.000 0.00 0.00 0.00 3.20
5276 5649 3.605634 GCTTCCTTCCTTCTTTCTCTCC 58.394 50.000 0.00 0.00 0.00 3.71
5277 5650 3.263170 GCTTCCTTCCTTCTTTCTCTCCT 59.737 47.826 0.00 0.00 0.00 3.69
5278 5651 4.263287 GCTTCCTTCCTTCTTTCTCTCCTT 60.263 45.833 0.00 0.00 0.00 3.36
5279 5652 5.747545 GCTTCCTTCCTTCTTTCTCTCCTTT 60.748 44.000 0.00 0.00 0.00 3.11
5280 5653 5.491323 TCCTTCCTTCTTTCTCTCCTTTC 57.509 43.478 0.00 0.00 0.00 2.62
5281 5654 5.158889 TCCTTCCTTCTTTCTCTCCTTTCT 58.841 41.667 0.00 0.00 0.00 2.52
5282 5655 5.608860 TCCTTCCTTCTTTCTCTCCTTTCTT 59.391 40.000 0.00 0.00 0.00 2.52
5283 5656 6.101881 TCCTTCCTTCTTTCTCTCCTTTCTTT 59.898 38.462 0.00 0.00 0.00 2.52
5313 5686 0.511653 GTTGAGACGCCGTTTTCTCC 59.488 55.000 0.00 0.00 37.99 3.71
5315 5688 0.038526 TGAGACGCCGTTTTCTCCTC 60.039 55.000 0.00 0.00 37.99 3.71
5316 5689 0.736672 GAGACGCCGTTTTCTCCTCC 60.737 60.000 0.00 0.00 33.41 4.30
5317 5690 1.186267 AGACGCCGTTTTCTCCTCCT 61.186 55.000 0.00 0.00 0.00 3.69
5318 5691 1.004918 ACGCCGTTTTCTCCTCCTG 60.005 57.895 0.00 0.00 0.00 3.86
5319 5692 2.391389 CGCCGTTTTCTCCTCCTGC 61.391 63.158 0.00 0.00 0.00 4.85
5320 5693 1.003233 GCCGTTTTCTCCTCCTGCT 60.003 57.895 0.00 0.00 0.00 4.24
5473 5852 0.740737 GGATGTGAAAGGAATGGCCG 59.259 55.000 0.00 0.00 43.43 6.13
5496 5877 2.663478 CGTCTTGTTTAGGCGCGCA 61.663 57.895 34.42 10.96 46.07 6.09
5499 5880 2.950172 CTTGTTTAGGCGCGCACGT 61.950 57.895 34.42 19.09 42.83 4.49
5502 5883 2.090524 GTTTAGGCGCGCACGTACT 61.091 57.895 34.42 22.06 42.83 2.73
5503 5884 0.798009 GTTTAGGCGCGCACGTACTA 60.798 55.000 34.42 20.94 42.83 1.82
5504 5885 0.798009 TTTAGGCGCGCACGTACTAC 60.798 55.000 34.42 12.85 42.83 2.73
5505 5886 1.647545 TTAGGCGCGCACGTACTACT 61.648 55.000 34.42 19.77 42.83 2.57
5506 5887 2.040213 TAGGCGCGCACGTACTACTC 62.040 60.000 34.42 11.21 42.83 2.59
5535 5916 9.314321 ACGTGATATAGTTTATTCAAGGAGTTG 57.686 33.333 0.00 0.00 34.67 3.16
5541 5922 6.787085 AGTTTATTCAAGGAGTTGTCTTCG 57.213 37.500 0.00 0.00 34.98 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.647346 TTATGGCGAGCTTACGGTTG 58.353 50.000 0.00 0.00 0.00 3.77
1 2 2.614829 ATTATGGCGAGCTTACGGTT 57.385 45.000 0.00 0.00 0.00 4.44
2 3 3.738830 TTATTATGGCGAGCTTACGGT 57.261 42.857 0.00 0.00 0.00 4.83
3 4 4.056050 AGTTTATTATGGCGAGCTTACGG 58.944 43.478 0.00 0.00 0.00 4.02
4 5 4.743151 TGAGTTTATTATGGCGAGCTTACG 59.257 41.667 0.00 0.00 0.00 3.18
5 6 5.753921 AGTGAGTTTATTATGGCGAGCTTAC 59.246 40.000 0.00 0.00 0.00 2.34
6 7 5.914033 AGTGAGTTTATTATGGCGAGCTTA 58.086 37.500 0.00 0.00 0.00 3.09
7 8 4.770795 AGTGAGTTTATTATGGCGAGCTT 58.229 39.130 0.00 0.00 0.00 3.74
8 9 4.141937 TGAGTGAGTTTATTATGGCGAGCT 60.142 41.667 0.00 0.00 0.00 4.09
9 10 4.119862 TGAGTGAGTTTATTATGGCGAGC 58.880 43.478 0.00 0.00 0.00 5.03
10 11 5.117745 CGATGAGTGAGTTTATTATGGCGAG 59.882 44.000 0.00 0.00 0.00 5.03
11 12 4.982295 CGATGAGTGAGTTTATTATGGCGA 59.018 41.667 0.00 0.00 0.00 5.54
12 13 4.376413 GCGATGAGTGAGTTTATTATGGCG 60.376 45.833 0.00 0.00 0.00 5.69
13 14 4.511454 TGCGATGAGTGAGTTTATTATGGC 59.489 41.667 0.00 0.00 0.00 4.40
14 15 5.050091 GGTGCGATGAGTGAGTTTATTATGG 60.050 44.000 0.00 0.00 0.00 2.74
15 16 5.332581 CGGTGCGATGAGTGAGTTTATTATG 60.333 44.000 0.00 0.00 0.00 1.90
16 17 4.745125 CGGTGCGATGAGTGAGTTTATTAT 59.255 41.667 0.00 0.00 0.00 1.28
17 18 4.109766 CGGTGCGATGAGTGAGTTTATTA 58.890 43.478 0.00 0.00 0.00 0.98
18 19 2.930040 CGGTGCGATGAGTGAGTTTATT 59.070 45.455 0.00 0.00 0.00 1.40
19 20 2.540515 CGGTGCGATGAGTGAGTTTAT 58.459 47.619 0.00 0.00 0.00 1.40
20 21 1.403647 CCGGTGCGATGAGTGAGTTTA 60.404 52.381 0.00 0.00 0.00 2.01
21 22 0.670546 CCGGTGCGATGAGTGAGTTT 60.671 55.000 0.00 0.00 0.00 2.66
22 23 1.079819 CCGGTGCGATGAGTGAGTT 60.080 57.895 0.00 0.00 0.00 3.01
23 24 2.573869 CCGGTGCGATGAGTGAGT 59.426 61.111 0.00 0.00 0.00 3.41
24 25 2.887568 GCCGGTGCGATGAGTGAG 60.888 66.667 1.90 0.00 0.00 3.51
25 26 2.723586 TTTGCCGGTGCGATGAGTGA 62.724 55.000 1.90 0.00 41.78 3.41
26 27 1.647545 ATTTGCCGGTGCGATGAGTG 61.648 55.000 1.90 0.00 41.78 3.51
27 28 0.960364 AATTTGCCGGTGCGATGAGT 60.960 50.000 1.90 0.00 41.78 3.41
28 29 0.248215 GAATTTGCCGGTGCGATGAG 60.248 55.000 1.90 0.00 41.78 2.90
29 30 1.653094 GGAATTTGCCGGTGCGATGA 61.653 55.000 1.90 0.00 41.78 2.92
30 31 1.226660 GGAATTTGCCGGTGCGATG 60.227 57.895 1.90 0.00 41.78 3.84
31 32 3.196648 GGAATTTGCCGGTGCGAT 58.803 55.556 1.90 0.00 41.78 4.58
40 41 1.298638 GCTCGGCATCGGAATTTGC 60.299 57.895 0.00 0.00 38.14 3.68
41 42 0.248215 GTGCTCGGCATCGGAATTTG 60.248 55.000 1.90 0.00 41.91 2.32
42 43 0.676466 TGTGCTCGGCATCGGAATTT 60.676 50.000 1.90 0.00 41.91 1.82
43 44 1.078497 TGTGCTCGGCATCGGAATT 60.078 52.632 1.90 0.00 41.91 2.17
44 45 1.815421 GTGTGCTCGGCATCGGAAT 60.815 57.895 1.90 0.00 41.91 3.01
45 46 2.434185 GTGTGCTCGGCATCGGAA 60.434 61.111 1.90 0.00 41.91 4.30
46 47 1.600511 TAAGTGTGCTCGGCATCGGA 61.601 55.000 1.90 0.00 41.91 4.55
47 48 1.153647 TAAGTGTGCTCGGCATCGG 60.154 57.895 1.90 0.00 41.91 4.18
48 49 1.742900 CGTAAGTGTGCTCGGCATCG 61.743 60.000 1.90 0.00 41.91 3.84
49 50 1.999051 CGTAAGTGTGCTCGGCATC 59.001 57.895 1.90 0.29 41.91 3.91
50 51 2.100631 GCGTAAGTGTGCTCGGCAT 61.101 57.895 1.90 0.00 39.83 4.40
51 52 2.736995 GCGTAAGTGTGCTCGGCA 60.737 61.111 0.00 0.00 41.68 5.69
52 53 2.736995 TGCGTAAGTGTGCTCGGC 60.737 61.111 0.00 0.00 41.68 5.54
53 54 2.716828 CGTGCGTAAGTGTGCTCGG 61.717 63.158 1.24 0.00 42.43 4.63
54 55 1.728074 TCGTGCGTAAGTGTGCTCG 60.728 57.895 2.66 2.66 46.08 5.03
55 56 0.937699 TGTCGTGCGTAAGTGTGCTC 60.938 55.000 0.00 0.00 41.68 4.26
56 57 1.066752 TGTCGTGCGTAAGTGTGCT 59.933 52.632 0.00 0.00 41.68 4.40
57 58 1.200839 GTGTCGTGCGTAAGTGTGC 59.799 57.895 0.00 0.00 41.68 4.57
58 59 0.872451 TGGTGTCGTGCGTAAGTGTG 60.872 55.000 0.00 0.00 41.68 3.82
59 60 0.032952 ATGGTGTCGTGCGTAAGTGT 59.967 50.000 0.00 0.00 41.68 3.55
60 61 1.985334 TATGGTGTCGTGCGTAAGTG 58.015 50.000 0.00 0.00 41.68 3.16
61 62 2.728690 TTATGGTGTCGTGCGTAAGT 57.271 45.000 0.00 0.00 41.68 2.24
62 63 4.574759 GAATTTATGGTGTCGTGCGTAAG 58.425 43.478 0.00 0.00 43.44 2.34
63 64 3.061028 CGAATTTATGGTGTCGTGCGTAA 59.939 43.478 0.00 0.00 0.00 3.18
64 65 2.599527 CGAATTTATGGTGTCGTGCGTA 59.400 45.455 0.00 0.00 0.00 4.42
65 66 1.392168 CGAATTTATGGTGTCGTGCGT 59.608 47.619 0.00 0.00 0.00 5.24
66 67 1.267334 CCGAATTTATGGTGTCGTGCG 60.267 52.381 0.00 0.00 0.00 5.34
67 68 2.004017 TCCGAATTTATGGTGTCGTGC 58.996 47.619 0.00 0.00 0.00 5.34
68 69 4.119862 AGATCCGAATTTATGGTGTCGTG 58.880 43.478 0.00 0.00 0.00 4.35
69 70 4.402056 AGATCCGAATTTATGGTGTCGT 57.598 40.909 0.00 0.00 0.00 4.34
70 71 4.808895 TCAAGATCCGAATTTATGGTGTCG 59.191 41.667 0.00 0.00 0.00 4.35
71 72 5.007724 GGTCAAGATCCGAATTTATGGTGTC 59.992 44.000 0.00 0.00 0.00 3.67
72 73 4.881850 GGTCAAGATCCGAATTTATGGTGT 59.118 41.667 0.00 0.00 0.00 4.16
73 74 4.881273 TGGTCAAGATCCGAATTTATGGTG 59.119 41.667 0.00 0.00 0.00 4.17
74 75 4.881850 GTGGTCAAGATCCGAATTTATGGT 59.118 41.667 0.00 0.00 0.00 3.55
75 76 4.275936 GGTGGTCAAGATCCGAATTTATGG 59.724 45.833 0.00 0.00 0.00 2.74
76 77 4.881273 TGGTGGTCAAGATCCGAATTTATG 59.119 41.667 0.00 0.00 0.00 1.90
77 78 5.110814 TGGTGGTCAAGATCCGAATTTAT 57.889 39.130 0.00 0.00 0.00 1.40
78 79 4.561500 TGGTGGTCAAGATCCGAATTTA 57.438 40.909 0.00 0.00 0.00 1.40
79 80 3.433306 TGGTGGTCAAGATCCGAATTT 57.567 42.857 0.00 0.00 0.00 1.82
80 81 3.054434 TGATGGTGGTCAAGATCCGAATT 60.054 43.478 0.00 0.00 0.00 2.17
81 82 2.505407 TGATGGTGGTCAAGATCCGAAT 59.495 45.455 0.00 0.00 0.00 3.34
82 83 1.905894 TGATGGTGGTCAAGATCCGAA 59.094 47.619 0.00 0.00 0.00 4.30
83 84 1.567357 TGATGGTGGTCAAGATCCGA 58.433 50.000 0.00 0.00 0.00 4.55
84 85 2.158914 TCATGATGGTGGTCAAGATCCG 60.159 50.000 0.00 0.00 0.00 4.18
85 86 3.474600 CTCATGATGGTGGTCAAGATCC 58.525 50.000 0.00 0.00 0.00 3.36
86 87 3.135348 TCCTCATGATGGTGGTCAAGATC 59.865 47.826 0.00 0.00 0.00 2.75
87 88 3.117745 TCCTCATGATGGTGGTCAAGAT 58.882 45.455 0.00 0.00 0.00 2.40
88 89 2.550175 TCCTCATGATGGTGGTCAAGA 58.450 47.619 0.00 0.00 0.00 3.02
89 90 3.572632 ATCCTCATGATGGTGGTCAAG 57.427 47.619 0.00 0.00 30.54 3.02
90 91 4.018490 CAAATCCTCATGATGGTGGTCAA 58.982 43.478 0.00 0.00 32.68 3.18
91 92 3.623703 CAAATCCTCATGATGGTGGTCA 58.376 45.455 0.00 0.00 32.68 4.02
92 93 2.954318 CCAAATCCTCATGATGGTGGTC 59.046 50.000 0.00 0.00 35.85 4.02
93 94 2.312741 ACCAAATCCTCATGATGGTGGT 59.687 45.455 15.55 14.72 43.20 4.16
94 95 3.022557 ACCAAATCCTCATGATGGTGG 57.977 47.619 15.55 14.22 41.85 4.61
95 96 4.382254 CCAAACCAAATCCTCATGATGGTG 60.382 45.833 16.72 7.16 31.79 4.17
96 97 3.770933 CCAAACCAAATCCTCATGATGGT 59.229 43.478 11.41 11.41 32.52 3.55
97 98 4.025360 TCCAAACCAAATCCTCATGATGG 58.975 43.478 10.19 10.19 32.68 3.51
98 99 5.657474 CTTCCAAACCAAATCCTCATGATG 58.343 41.667 0.00 0.00 32.68 3.07
99 100 4.161001 GCTTCCAAACCAAATCCTCATGAT 59.839 41.667 0.00 0.00 34.22 2.45
100 101 3.511146 GCTTCCAAACCAAATCCTCATGA 59.489 43.478 0.00 0.00 0.00 3.07
101 102 3.674138 CGCTTCCAAACCAAATCCTCATG 60.674 47.826 0.00 0.00 0.00 3.07
102 103 2.493278 CGCTTCCAAACCAAATCCTCAT 59.507 45.455 0.00 0.00 0.00 2.90
103 104 1.885887 CGCTTCCAAACCAAATCCTCA 59.114 47.619 0.00 0.00 0.00 3.86
104 105 1.402852 GCGCTTCCAAACCAAATCCTC 60.403 52.381 0.00 0.00 0.00 3.71
105 106 0.603065 GCGCTTCCAAACCAAATCCT 59.397 50.000 0.00 0.00 0.00 3.24
106 107 0.316841 TGCGCTTCCAAACCAAATCC 59.683 50.000 9.73 0.00 0.00 3.01
107 108 1.792367 GTTGCGCTTCCAAACCAAATC 59.208 47.619 9.73 0.00 0.00 2.17
108 109 1.137872 TGTTGCGCTTCCAAACCAAAT 59.862 42.857 9.73 0.00 0.00 2.32
109 110 0.532573 TGTTGCGCTTCCAAACCAAA 59.467 45.000 9.73 0.00 0.00 3.28
110 111 0.532573 TTGTTGCGCTTCCAAACCAA 59.467 45.000 9.73 0.00 0.00 3.67
111 112 0.102120 CTTGTTGCGCTTCCAAACCA 59.898 50.000 9.73 0.00 0.00 3.67
112 113 0.102300 ACTTGTTGCGCTTCCAAACC 59.898 50.000 9.73 0.00 0.00 3.27
113 114 1.477105 GACTTGTTGCGCTTCCAAAC 58.523 50.000 9.73 4.58 0.00 2.93
114 115 0.383949 GGACTTGTTGCGCTTCCAAA 59.616 50.000 9.73 0.00 0.00 3.28
115 116 1.781025 CGGACTTGTTGCGCTTCCAA 61.781 55.000 9.73 7.85 29.64 3.53
116 117 2.250939 CGGACTTGTTGCGCTTCCA 61.251 57.895 9.73 0.00 29.64 3.53
117 118 1.298859 ATCGGACTTGTTGCGCTTCC 61.299 55.000 9.73 3.89 39.30 3.46
118 119 0.095417 GATCGGACTTGTTGCGCTTC 59.905 55.000 9.73 1.72 39.30 3.86
119 120 0.320771 AGATCGGACTTGTTGCGCTT 60.321 50.000 9.73 0.00 39.30 4.68
120 121 0.320771 AAGATCGGACTTGTTGCGCT 60.321 50.000 9.73 0.00 39.30 5.92
121 122 0.095417 GAAGATCGGACTTGTTGCGC 59.905 55.000 0.00 0.00 39.30 6.09
122 123 1.656095 GAGAAGATCGGACTTGTTGCG 59.344 52.381 0.00 0.00 41.20 4.85
134 135 4.268884 CGAAAATTCACCTCCGAGAAGATC 59.731 45.833 0.00 0.00 0.00 2.75
135 136 4.184629 CGAAAATTCACCTCCGAGAAGAT 58.815 43.478 0.00 0.00 0.00 2.40
136 137 3.006537 ACGAAAATTCACCTCCGAGAAGA 59.993 43.478 0.00 0.00 0.00 2.87
137 138 3.326747 ACGAAAATTCACCTCCGAGAAG 58.673 45.455 0.00 0.00 0.00 2.85
138 139 3.396260 ACGAAAATTCACCTCCGAGAA 57.604 42.857 0.00 0.00 0.00 2.87
139 140 3.508793 AGTACGAAAATTCACCTCCGAGA 59.491 43.478 0.00 0.00 0.00 4.04
140 141 3.846360 AGTACGAAAATTCACCTCCGAG 58.154 45.455 0.00 0.00 0.00 4.63
141 142 3.947910 AGTACGAAAATTCACCTCCGA 57.052 42.857 0.00 0.00 0.00 4.55
142 143 4.487948 TGTAGTACGAAAATTCACCTCCG 58.512 43.478 0.00 0.00 0.00 4.63
143 144 4.329256 GCTGTAGTACGAAAATTCACCTCC 59.671 45.833 0.00 0.00 0.00 4.30
144 145 5.169295 AGCTGTAGTACGAAAATTCACCTC 58.831 41.667 0.00 0.00 0.00 3.85
145 146 5.148651 AGCTGTAGTACGAAAATTCACCT 57.851 39.130 0.00 0.00 0.00 4.00
146 147 4.031426 CGAGCTGTAGTACGAAAATTCACC 59.969 45.833 0.00 0.00 0.00 4.02
147 148 4.490479 GCGAGCTGTAGTACGAAAATTCAC 60.490 45.833 0.00 0.00 0.00 3.18
148 149 3.611113 GCGAGCTGTAGTACGAAAATTCA 59.389 43.478 0.00 0.00 0.00 2.57
149 150 3.301007 CGCGAGCTGTAGTACGAAAATTC 60.301 47.826 0.00 0.00 0.00 2.17
150 151 2.597305 CGCGAGCTGTAGTACGAAAATT 59.403 45.455 0.00 0.00 0.00 1.82
157 158 2.532531 TACAACGCGAGCTGTAGTAC 57.467 50.000 15.93 0.00 41.32 2.73
164 165 2.427232 TAACAACTACAACGCGAGCT 57.573 45.000 15.93 0.00 0.00 4.09
165 166 2.921754 AGATAACAACTACAACGCGAGC 59.078 45.455 15.93 0.00 0.00 5.03
177 178 5.812642 AGATGATCACCAACGAGATAACAAC 59.187 40.000 0.00 0.00 0.00 3.32
179 180 5.598416 AGATGATCACCAACGAGATAACA 57.402 39.130 0.00 0.00 0.00 2.41
180 181 5.921408 GGTAGATGATCACCAACGAGATAAC 59.079 44.000 0.00 0.00 34.77 1.89
181 182 5.278315 CGGTAGATGATCACCAACGAGATAA 60.278 44.000 0.00 0.00 34.25 1.75
182 183 4.215613 CGGTAGATGATCACCAACGAGATA 59.784 45.833 0.00 0.00 34.25 1.98
183 184 3.004839 CGGTAGATGATCACCAACGAGAT 59.995 47.826 0.00 0.00 34.25 2.75
185 186 2.732366 CGGTAGATGATCACCAACGAG 58.268 52.381 0.00 0.00 34.25 4.18
186 187 1.202371 GCGGTAGATGATCACCAACGA 60.202 52.381 13.05 0.00 34.25 3.85
187 188 1.202417 AGCGGTAGATGATCACCAACG 60.202 52.381 0.00 1.44 34.25 4.10
188 189 2.604046 AGCGGTAGATGATCACCAAC 57.396 50.000 0.00 0.00 34.25 3.77
189 190 3.296854 AGTAGCGGTAGATGATCACCAA 58.703 45.455 0.00 0.00 34.25 3.67
191 192 4.073549 AGTAGTAGCGGTAGATGATCACC 58.926 47.826 0.00 0.00 0.00 4.02
192 193 5.122082 GGTAGTAGTAGCGGTAGATGATCAC 59.878 48.000 0.00 0.00 0.00 3.06
193 194 5.243981 GGTAGTAGTAGCGGTAGATGATCA 58.756 45.833 0.00 0.00 0.00 2.92
204 209 3.717452 ATCTAGGGGGTAGTAGTAGCG 57.283 52.381 0.83 0.00 0.00 4.26
219 224 5.335583 CGTGGCATTCTCTTCCTCTATCTAG 60.336 48.000 0.00 0.00 0.00 2.43
265 270 9.110502 CAAAGTAAAAGAACCAAAGAGAGTACT 57.889 33.333 0.00 0.00 0.00 2.73
266 271 7.856398 GCAAAGTAAAAGAACCAAAGAGAGTAC 59.144 37.037 0.00 0.00 0.00 2.73
267 272 7.554835 TGCAAAGTAAAAGAACCAAAGAGAGTA 59.445 33.333 0.00 0.00 0.00 2.59
268 273 6.377146 TGCAAAGTAAAAGAACCAAAGAGAGT 59.623 34.615 0.00 0.00 0.00 3.24
269 274 6.795399 TGCAAAGTAAAAGAACCAAAGAGAG 58.205 36.000 0.00 0.00 0.00 3.20
270 275 6.767524 TGCAAAGTAAAAGAACCAAAGAGA 57.232 33.333 0.00 0.00 0.00 3.10
286 291 9.236006 ACTTCAGACAATTCTTATATGCAAAGT 57.764 29.630 0.00 0.00 0.00 2.66
287 292 9.713740 GACTTCAGACAATTCTTATATGCAAAG 57.286 33.333 0.00 0.00 0.00 2.77
288 293 9.453572 AGACTTCAGACAATTCTTATATGCAAA 57.546 29.630 0.00 0.00 0.00 3.68
289 294 8.886719 CAGACTTCAGACAATTCTTATATGCAA 58.113 33.333 0.00 0.00 0.00 4.08
290 295 8.043113 ACAGACTTCAGACAATTCTTATATGCA 58.957 33.333 0.00 0.00 0.00 3.96
291 296 8.430801 ACAGACTTCAGACAATTCTTATATGC 57.569 34.615 0.00 0.00 0.00 3.14
296 301 9.832445 AAACTTACAGACTTCAGACAATTCTTA 57.168 29.630 0.00 0.00 0.00 2.10
297 302 8.616076 CAAACTTACAGACTTCAGACAATTCTT 58.384 33.333 0.00 0.00 0.00 2.52
298 303 7.987458 TCAAACTTACAGACTTCAGACAATTCT 59.013 33.333 0.00 0.00 0.00 2.40
299 304 8.064814 GTCAAACTTACAGACTTCAGACAATTC 58.935 37.037 0.00 0.00 0.00 2.17
300 305 7.012421 GGTCAAACTTACAGACTTCAGACAATT 59.988 37.037 0.00 0.00 32.98 2.32
301 306 6.483640 GGTCAAACTTACAGACTTCAGACAAT 59.516 38.462 0.00 0.00 32.98 2.71
302 307 5.815740 GGTCAAACTTACAGACTTCAGACAA 59.184 40.000 0.00 0.00 32.98 3.18
303 308 5.105106 TGGTCAAACTTACAGACTTCAGACA 60.105 40.000 0.00 0.00 32.98 3.41
304 309 5.357257 TGGTCAAACTTACAGACTTCAGAC 58.643 41.667 0.00 0.00 32.98 3.51
305 310 5.607939 TGGTCAAACTTACAGACTTCAGA 57.392 39.130 0.00 0.00 32.98 3.27
306 311 8.553459 AATATGGTCAAACTTACAGACTTCAG 57.447 34.615 0.00 0.00 32.98 3.02
307 312 8.918202 AAATATGGTCAAACTTACAGACTTCA 57.082 30.769 0.00 0.00 32.98 3.02
369 374 9.093970 CGTCATGACCTTAGTTTTCATATTGTA 57.906 33.333 20.03 0.00 0.00 2.41
370 375 7.414098 GCGTCATGACCTTAGTTTTCATATTGT 60.414 37.037 20.03 0.00 0.00 2.71
371 376 6.907212 GCGTCATGACCTTAGTTTTCATATTG 59.093 38.462 20.03 1.03 0.00 1.90
372 377 6.597672 TGCGTCATGACCTTAGTTTTCATATT 59.402 34.615 20.03 0.00 0.00 1.28
373 378 6.112734 TGCGTCATGACCTTAGTTTTCATAT 58.887 36.000 20.03 0.00 0.00 1.78
374 379 5.483811 TGCGTCATGACCTTAGTTTTCATA 58.516 37.500 20.03 0.00 0.00 2.15
375 380 4.323417 TGCGTCATGACCTTAGTTTTCAT 58.677 39.130 20.03 0.00 0.00 2.57
376 381 3.734463 TGCGTCATGACCTTAGTTTTCA 58.266 40.909 20.03 2.13 0.00 2.69
377 382 4.631813 AGATGCGTCATGACCTTAGTTTTC 59.368 41.667 20.03 6.24 0.00 2.29
378 383 4.579869 AGATGCGTCATGACCTTAGTTTT 58.420 39.130 20.03 0.00 0.00 2.43
379 384 4.207891 AGATGCGTCATGACCTTAGTTT 57.792 40.909 20.03 0.00 0.00 2.66
380 385 3.895232 AGATGCGTCATGACCTTAGTT 57.105 42.857 20.03 0.00 0.00 2.24
381 386 4.683832 GTTAGATGCGTCATGACCTTAGT 58.316 43.478 20.03 5.21 0.00 2.24
382 387 3.731216 CGTTAGATGCGTCATGACCTTAG 59.269 47.826 20.03 7.16 0.00 2.18
383 388 3.129813 ACGTTAGATGCGTCATGACCTTA 59.870 43.478 20.03 7.01 38.23 2.69
384 389 2.094182 ACGTTAGATGCGTCATGACCTT 60.094 45.455 20.03 10.66 38.23 3.50
385 390 1.476891 ACGTTAGATGCGTCATGACCT 59.523 47.619 20.03 13.09 38.23 3.85
386 391 1.922570 ACGTTAGATGCGTCATGACC 58.077 50.000 20.03 12.96 38.23 4.02
387 392 2.666508 ACAACGTTAGATGCGTCATGAC 59.333 45.455 16.21 16.21 42.10 3.06
388 393 2.954316 ACAACGTTAGATGCGTCATGA 58.046 42.857 8.99 0.00 42.10 3.07
389 394 3.122780 TCAACAACGTTAGATGCGTCATG 59.877 43.478 8.99 0.00 42.10 3.07
390 395 3.322369 TCAACAACGTTAGATGCGTCAT 58.678 40.909 8.99 0.00 42.10 3.06
391 396 2.745102 TCAACAACGTTAGATGCGTCA 58.255 42.857 8.99 0.00 42.10 4.35
392 397 3.991605 ATCAACAACGTTAGATGCGTC 57.008 42.857 0.00 0.00 42.10 5.19
393 398 4.212425 TGAAATCAACAACGTTAGATGCGT 59.788 37.500 0.00 0.00 45.07 5.24
394 399 4.549599 GTGAAATCAACAACGTTAGATGCG 59.450 41.667 0.00 0.00 0.00 4.73
395 400 5.448438 TGTGAAATCAACAACGTTAGATGC 58.552 37.500 0.00 2.78 0.00 3.91
396 401 9.773328 ATAATGTGAAATCAACAACGTTAGATG 57.227 29.630 0.00 0.30 0.00 2.90
397 402 9.773328 CATAATGTGAAATCAACAACGTTAGAT 57.227 29.630 0.00 2.22 0.00 1.98
398 403 8.994170 TCATAATGTGAAATCAACAACGTTAGA 58.006 29.630 0.00 0.00 32.78 2.10
399 404 9.605955 TTCATAATGTGAAATCAACAACGTTAG 57.394 29.630 0.00 0.00 43.64 2.34
443 448 9.063615 AGACTCGTAAACTTTGACCAATTTTAT 57.936 29.630 0.00 0.00 0.00 1.40
444 449 8.441312 AGACTCGTAAACTTTGACCAATTTTA 57.559 30.769 0.00 0.00 0.00 1.52
445 450 7.329588 AGACTCGTAAACTTTGACCAATTTT 57.670 32.000 0.00 0.00 0.00 1.82
446 451 6.937436 AGACTCGTAAACTTTGACCAATTT 57.063 33.333 0.00 0.00 0.00 1.82
447 452 6.540914 TCAAGACTCGTAAACTTTGACCAATT 59.459 34.615 0.00 0.00 0.00 2.32
448 453 6.018180 GTCAAGACTCGTAAACTTTGACCAAT 60.018 38.462 4.32 0.00 0.00 3.16
449 454 5.292589 GTCAAGACTCGTAAACTTTGACCAA 59.707 40.000 4.32 0.00 0.00 3.67
450 455 4.807304 GTCAAGACTCGTAAACTTTGACCA 59.193 41.667 4.32 0.00 0.00 4.02
451 456 5.048507 AGTCAAGACTCGTAAACTTTGACC 58.951 41.667 10.51 0.00 36.92 4.02
452 457 6.255020 TGAAGTCAAGACTCGTAAACTTTGAC 59.745 38.462 2.78 6.98 41.58 3.18
453 458 6.334989 TGAAGTCAAGACTCGTAAACTTTGA 58.665 36.000 2.78 0.00 41.58 2.69
454 459 6.475727 TCTGAAGTCAAGACTCGTAAACTTTG 59.524 38.462 2.78 0.00 41.58 2.77
455 460 6.476053 GTCTGAAGTCAAGACTCGTAAACTTT 59.524 38.462 2.78 0.00 41.58 2.66
456 461 5.978322 GTCTGAAGTCAAGACTCGTAAACTT 59.022 40.000 2.78 0.00 41.58 2.66
457 462 5.067413 TGTCTGAAGTCAAGACTCGTAAACT 59.933 40.000 2.78 0.00 41.58 2.66
458 463 5.279384 TGTCTGAAGTCAAGACTCGTAAAC 58.721 41.667 2.78 0.58 41.58 2.01
459 464 5.298527 TCTGTCTGAAGTCAAGACTCGTAAA 59.701 40.000 2.78 0.00 41.58 2.01
460 465 4.820173 TCTGTCTGAAGTCAAGACTCGTAA 59.180 41.667 2.78 0.00 41.58 3.18
461 466 4.386711 TCTGTCTGAAGTCAAGACTCGTA 58.613 43.478 2.78 0.00 41.58 3.43
462 467 3.215151 TCTGTCTGAAGTCAAGACTCGT 58.785 45.455 2.78 0.00 41.58 4.18
463 468 3.906014 TCTGTCTGAAGTCAAGACTCG 57.094 47.619 2.78 0.00 41.58 4.18
464 469 5.643379 AGATCTGTCTGAAGTCAAGACTC 57.357 43.478 2.78 0.00 35.25 3.36
465 470 7.716799 ATAAGATCTGTCTGAAGTCAAGACT 57.283 36.000 0.00 0.00 37.82 3.24
466 471 9.462174 CATATAAGATCTGTCTGAAGTCAAGAC 57.538 37.037 0.00 0.00 34.13 3.01
467 472 9.194972 ACATATAAGATCTGTCTGAAGTCAAGA 57.805 33.333 0.00 0.00 34.13 3.02
486 491 9.563748 CCCCGATCCTTTTTAGTTTACATATAA 57.436 33.333 0.00 0.00 0.00 0.98
487 492 8.158789 CCCCCGATCCTTTTTAGTTTACATATA 58.841 37.037 0.00 0.00 0.00 0.86
488 493 7.002276 CCCCCGATCCTTTTTAGTTTACATAT 58.998 38.462 0.00 0.00 0.00 1.78
489 494 6.158344 TCCCCCGATCCTTTTTAGTTTACATA 59.842 38.462 0.00 0.00 0.00 2.29
490 495 5.044698 TCCCCCGATCCTTTTTAGTTTACAT 60.045 40.000 0.00 0.00 0.00 2.29
491 496 4.289148 TCCCCCGATCCTTTTTAGTTTACA 59.711 41.667 0.00 0.00 0.00 2.41
492 497 4.847198 TCCCCCGATCCTTTTTAGTTTAC 58.153 43.478 0.00 0.00 0.00 2.01
493 498 4.537288 ACTCCCCCGATCCTTTTTAGTTTA 59.463 41.667 0.00 0.00 0.00 2.01
494 499 3.332783 ACTCCCCCGATCCTTTTTAGTTT 59.667 43.478 0.00 0.00 0.00 2.66
495 500 2.917600 ACTCCCCCGATCCTTTTTAGTT 59.082 45.455 0.00 0.00 0.00 2.24
496 501 2.558974 ACTCCCCCGATCCTTTTTAGT 58.441 47.619 0.00 0.00 0.00 2.24
497 502 3.453353 TGTACTCCCCCGATCCTTTTTAG 59.547 47.826 0.00 0.00 0.00 1.85
498 503 3.198417 GTGTACTCCCCCGATCCTTTTTA 59.802 47.826 0.00 0.00 0.00 1.52
499 504 2.026542 GTGTACTCCCCCGATCCTTTTT 60.027 50.000 0.00 0.00 0.00 1.94
500 505 1.558294 GTGTACTCCCCCGATCCTTTT 59.442 52.381 0.00 0.00 0.00 2.27
501 506 1.201424 GTGTACTCCCCCGATCCTTT 58.799 55.000 0.00 0.00 0.00 3.11
502 507 0.042131 TGTGTACTCCCCCGATCCTT 59.958 55.000 0.00 0.00 0.00 3.36
503 508 0.686769 GTGTGTACTCCCCCGATCCT 60.687 60.000 0.00 0.00 0.00 3.24
504 509 0.974010 TGTGTGTACTCCCCCGATCC 60.974 60.000 0.00 0.00 0.00 3.36
505 510 0.899720 TTGTGTGTACTCCCCCGATC 59.100 55.000 0.00 0.00 0.00 3.69
506 511 1.354101 TTTGTGTGTACTCCCCCGAT 58.646 50.000 0.00 0.00 0.00 4.18
507 512 1.129917 TTTTGTGTGTACTCCCCCGA 58.870 50.000 0.00 0.00 0.00 5.14
508 513 1.232119 GTTTTGTGTGTACTCCCCCG 58.768 55.000 0.00 0.00 0.00 5.73
509 514 1.133730 TGGTTTTGTGTGTACTCCCCC 60.134 52.381 0.00 0.00 0.00 5.40
510 515 1.951602 GTGGTTTTGTGTGTACTCCCC 59.048 52.381 0.00 0.00 0.00 4.81
511 516 1.951602 GGTGGTTTTGTGTGTACTCCC 59.048 52.381 0.00 0.00 0.00 4.30
512 517 2.927028 AGGTGGTTTTGTGTGTACTCC 58.073 47.619 0.00 0.00 0.00 3.85
513 518 7.916914 ATTATAGGTGGTTTTGTGTGTACTC 57.083 36.000 0.00 0.00 0.00 2.59
616 621 6.472163 CGTAGCTTTGAGTTTCATTTGTTTGT 59.528 34.615 0.00 0.00 0.00 2.83
631 636 4.067972 ACAAGAGGTTTCGTAGCTTTGA 57.932 40.909 0.00 0.00 33.94 2.69
659 664 9.627123 TCTCTGGTTTCTTCTTCTTTTTATGAA 57.373 29.630 0.00 0.00 0.00 2.57
660 665 9.627123 TTCTCTGGTTTCTTCTTCTTTTTATGA 57.373 29.630 0.00 0.00 0.00 2.15
663 668 9.681062 TCTTTCTCTGGTTTCTTCTTCTTTTTA 57.319 29.630 0.00 0.00 0.00 1.52
703 745 6.297080 ACTGCTGAGAGTACTGTACTAGTA 57.703 41.667 19.73 12.33 40.89 1.82
704 746 5.168647 ACTGCTGAGAGTACTGTACTAGT 57.831 43.478 19.73 14.92 43.56 2.57
705 747 5.413213 ACAACTGCTGAGAGTACTGTACTAG 59.587 44.000 19.73 14.55 39.59 2.57
706 748 5.181433 CACAACTGCTGAGAGTACTGTACTA 59.819 44.000 19.73 4.75 39.59 1.82
707 749 4.022762 CACAACTGCTGAGAGTACTGTACT 60.023 45.833 19.79 19.79 42.86 2.73
708 750 4.230657 CACAACTGCTGAGAGTACTGTAC 58.769 47.826 9.93 9.93 0.00 2.90
709 751 3.255888 CCACAACTGCTGAGAGTACTGTA 59.744 47.826 0.00 0.00 0.00 2.74
742 784 2.603171 AACATTGTTGGGGCCGGG 60.603 61.111 2.18 0.00 0.00 5.73
744 792 1.905843 TCCAACATTGTTGGGGCCG 60.906 57.895 36.30 18.59 39.96 6.13
854 902 4.722700 CTGTGACTTGGGGCCGGG 62.723 72.222 2.18 0.00 0.00 5.73
857 905 3.927481 GAGGCTGTGACTTGGGGCC 62.927 68.421 0.00 0.00 42.74 5.80
858 906 2.360475 GAGGCTGTGACTTGGGGC 60.360 66.667 0.00 0.00 0.00 5.80
859 907 2.046892 CGAGGCTGTGACTTGGGG 60.047 66.667 0.00 0.00 0.00 4.96
860 908 2.743928 GCGAGGCTGTGACTTGGG 60.744 66.667 0.00 0.00 0.00 4.12
861 909 2.743928 GGCGAGGCTGTGACTTGG 60.744 66.667 0.00 0.00 0.00 3.61
862 910 1.739562 GAGGCGAGGCTGTGACTTG 60.740 63.158 3.24 0.00 0.00 3.16
966 1014 3.943691 CGGTGTTGGGGTCGGGAA 61.944 66.667 0.00 0.00 0.00 3.97
967 1015 4.938074 TCGGTGTTGGGGTCGGGA 62.938 66.667 0.00 0.00 0.00 5.14
971 1019 3.618750 TCGGTCGGTGTTGGGGTC 61.619 66.667 0.00 0.00 0.00 4.46
982 1030 4.907034 CGCCTGATCCGTCGGTCG 62.907 72.222 11.88 3.18 39.52 4.79
983 1031 2.846652 ATCGCCTGATCCGTCGGTC 61.847 63.158 11.88 8.88 0.00 4.79
1005 1053 3.535629 CTCTGCCGTGGCCTCAACA 62.536 63.158 8.69 0.00 41.09 3.33
1008 1056 2.922503 TTCTCTGCCGTGGCCTCA 60.923 61.111 8.69 0.00 41.09 3.86
1016 1064 1.738099 CCGGTGTTCTTCTCTGCCG 60.738 63.158 0.00 0.00 38.99 5.69
1113 1182 1.222113 GTCCTGGTAGCTGGCCTTC 59.778 63.158 12.65 0.00 0.00 3.46
1189 1266 4.742201 CGTGAGCGTGACAGGGGG 62.742 72.222 0.00 0.00 0.00 5.40
1215 1292 5.119588 CCAACAGAAAAGATTTCTACGCGTA 59.880 40.000 19.40 19.40 0.00 4.42
1235 1334 4.691216 TGCCGCAAAATTTATAAACCCAAC 59.309 37.500 0.00 0.00 0.00 3.77
1274 1373 2.277084 GGCGAGCGAAATAAAAGAGGA 58.723 47.619 0.00 0.00 0.00 3.71
1288 1393 3.443045 CAACATGTGGGGGCGAGC 61.443 66.667 0.00 0.00 0.00 5.03
1289 1394 2.751436 CCAACATGTGGGGGCGAG 60.751 66.667 11.95 0.00 44.64 5.03
1311 1416 2.094649 TCCCCAAACAAACACGAACAAC 60.095 45.455 0.00 0.00 0.00 3.32
1426 1537 1.067846 GGCGCGTGAGGTATGATCATA 60.068 52.381 11.49 11.49 0.00 2.15
1455 1570 0.249031 CGTGATCGAGCCACTATGCA 60.249 55.000 15.72 0.00 39.71 3.96
1456 1571 1.552348 GCGTGATCGAGCCACTATGC 61.552 60.000 15.72 9.89 39.71 3.14
1465 1580 2.951745 GCGTGAGGCGTGATCGAG 60.952 66.667 0.00 0.00 43.66 4.04
1539 1660 3.022406 GGAGAGAGCAGAAATGGCAAAT 58.978 45.455 0.00 0.00 0.00 2.32
1555 1676 0.530744 TGACGGACCATTTCGGAGAG 59.469 55.000 0.00 0.00 38.43 3.20
1556 1677 1.134818 CATGACGGACCATTTCGGAGA 60.135 52.381 0.00 0.00 38.63 3.71
1561 1682 0.734889 CAGCCATGACGGACCATTTC 59.265 55.000 0.00 0.00 36.56 2.17
1571 1692 0.749454 GACCATGACCCAGCCATGAC 60.749 60.000 0.00 0.00 42.89 3.06
1572 1693 1.206811 TGACCATGACCCAGCCATGA 61.207 55.000 0.00 0.00 42.89 3.07
1573 1694 0.106369 ATGACCATGACCCAGCCATG 60.106 55.000 0.00 0.00 40.66 3.66
1574 1695 0.106369 CATGACCATGACCCAGCCAT 60.106 55.000 4.03 0.00 41.20 4.40
1575 1696 1.303948 CATGACCATGACCCAGCCA 59.696 57.895 4.03 0.00 41.20 4.75
1576 1697 1.454479 CCATGACCATGACCCAGCC 60.454 63.158 11.28 0.00 41.20 4.85
1577 1698 0.749454 GACCATGACCATGACCCAGC 60.749 60.000 11.28 0.00 41.20 4.85
1578 1699 0.620030 TGACCATGACCATGACCCAG 59.380 55.000 11.28 0.00 41.20 4.45
1579 1700 0.327924 GTGACCATGACCATGACCCA 59.672 55.000 11.28 3.86 41.20 4.51
1580 1701 0.744414 CGTGACCATGACCATGACCC 60.744 60.000 11.28 1.57 41.20 4.46
1581 1702 0.744414 CCGTGACCATGACCATGACC 60.744 60.000 11.28 3.73 41.20 4.02
1598 1719 1.202222 GCAAGCCATCATTGTCTTCCG 60.202 52.381 0.00 0.00 0.00 4.30
1637 1762 6.149504 GCAAGAAGCAAAACATGAAAGATC 57.850 37.500 0.00 0.00 44.79 2.75
1665 1790 9.826574 TTGTGTTGAAACTGAAATAGTAGTAGT 57.173 29.630 0.00 0.00 39.18 2.73
1668 1793 8.958119 TCTTGTGTTGAAACTGAAATAGTAGT 57.042 30.769 0.00 0.00 39.18 2.73
1671 1796 9.736023 GATTTCTTGTGTTGAAACTGAAATAGT 57.264 29.630 0.00 0.00 42.89 2.12
1672 1797 9.185192 GGATTTCTTGTGTTGAAACTGAAATAG 57.815 33.333 0.00 0.00 35.82 1.73
1673 1798 8.141268 GGGATTTCTTGTGTTGAAACTGAAATA 58.859 33.333 0.00 0.00 35.82 1.40
1674 1799 6.986231 GGGATTTCTTGTGTTGAAACTGAAAT 59.014 34.615 0.00 0.00 37.02 2.17
1675 1800 6.071108 TGGGATTTCTTGTGTTGAAACTGAAA 60.071 34.615 0.00 0.00 36.43 2.69
1676 1801 5.420421 TGGGATTTCTTGTGTTGAAACTGAA 59.580 36.000 0.00 0.00 36.43 3.02
1677 1802 4.952957 TGGGATTTCTTGTGTTGAAACTGA 59.047 37.500 0.00 0.00 36.43 3.41
1678 1803 5.043248 GTGGGATTTCTTGTGTTGAAACTG 58.957 41.667 0.00 0.00 36.43 3.16
1679 1804 4.099419 GGTGGGATTTCTTGTGTTGAAACT 59.901 41.667 0.00 0.00 36.43 2.66
1680 1805 4.099419 AGGTGGGATTTCTTGTGTTGAAAC 59.901 41.667 0.00 0.00 36.43 2.78
1692 1835 7.450074 AGAAACCAAATTAAAGGTGGGATTTC 58.550 34.615 7.20 8.11 38.37 2.17
1712 1888 1.587946 CCTGCAACGCAAACAAGAAAC 59.412 47.619 0.00 0.00 38.41 2.78
1851 2027 4.342378 AGCTATGCTATGATATACGGTGGG 59.658 45.833 0.00 0.00 36.99 4.61
1853 2029 5.508153 GGGAGCTATGCTATGATATACGGTG 60.508 48.000 0.00 0.00 39.88 4.94
1854 2030 4.585162 GGGAGCTATGCTATGATATACGGT 59.415 45.833 0.00 0.00 39.88 4.83
1855 2031 4.830046 AGGGAGCTATGCTATGATATACGG 59.170 45.833 0.00 0.00 39.88 4.02
1857 2033 5.245075 GGGAGGGAGCTATGCTATGATATAC 59.755 48.000 0.00 0.00 39.88 1.47
1858 2034 5.136909 AGGGAGGGAGCTATGCTATGATATA 59.863 44.000 0.00 0.00 39.88 0.86
1859 2035 4.078101 AGGGAGGGAGCTATGCTATGATAT 60.078 45.833 0.00 0.00 39.88 1.63
1860 2036 3.273351 AGGGAGGGAGCTATGCTATGATA 59.727 47.826 0.00 0.00 39.88 2.15
1861 2037 2.045605 AGGGAGGGAGCTATGCTATGAT 59.954 50.000 0.00 0.00 39.88 2.45
1862 2038 1.434773 AGGGAGGGAGCTATGCTATGA 59.565 52.381 0.00 0.00 39.88 2.15
1863 2039 1.830477 GAGGGAGGGAGCTATGCTATG 59.170 57.143 0.00 0.00 39.88 2.23
1864 2040 1.721691 AGAGGGAGGGAGCTATGCTAT 59.278 52.381 0.00 0.00 39.88 2.97
1865 2041 1.076350 GAGAGGGAGGGAGCTATGCTA 59.924 57.143 0.00 0.00 39.88 3.49
1866 2042 0.178935 GAGAGGGAGGGAGCTATGCT 60.179 60.000 0.00 0.00 43.88 3.79
1867 2043 0.178935 AGAGAGGGAGGGAGCTATGC 60.179 60.000 0.00 0.00 0.00 3.14
1868 2044 1.428912 AGAGAGAGGGAGGGAGCTATG 59.571 57.143 0.00 0.00 0.00 2.23
1869 2045 1.710809 GAGAGAGAGGGAGGGAGCTAT 59.289 57.143 0.00 0.00 0.00 2.97
1870 2046 1.145571 GAGAGAGAGGGAGGGAGCTA 58.854 60.000 0.00 0.00 0.00 3.32
1871 2047 0.627469 AGAGAGAGAGGGAGGGAGCT 60.627 60.000 0.00 0.00 0.00 4.09
1872 2048 0.178990 GAGAGAGAGAGGGAGGGAGC 60.179 65.000 0.00 0.00 0.00 4.70
1876 2052 2.370189 GAGAGAGAGAGAGAGAGGGAGG 59.630 59.091 0.00 0.00 0.00 4.30
1880 2056 4.222336 AGAGAGAGAGAGAGAGAGAGAGG 58.778 52.174 0.00 0.00 0.00 3.69
1981 2188 1.734137 GCTGCCTGCCATCTTGATG 59.266 57.895 3.77 3.77 35.15 3.07
2001 2213 4.874966 CAGATCAAAGCAAACCAAACCAAA 59.125 37.500 0.00 0.00 0.00 3.28
2002 2214 4.440880 CAGATCAAAGCAAACCAAACCAA 58.559 39.130 0.00 0.00 0.00 3.67
2003 2215 3.181467 CCAGATCAAAGCAAACCAAACCA 60.181 43.478 0.00 0.00 0.00 3.67
2004 2216 3.392882 CCAGATCAAAGCAAACCAAACC 58.607 45.455 0.00 0.00 0.00 3.27
2005 2217 3.392882 CCCAGATCAAAGCAAACCAAAC 58.607 45.455 0.00 0.00 0.00 2.93
2080 2293 2.338809 TCCACTCCTGTGAATGGAACT 58.661 47.619 0.00 0.00 46.55 3.01
2207 2425 1.688627 GGTACTGGAGTCCTGGTAGGG 60.689 61.905 19.22 0.48 35.59 3.53
2213 2431 0.898320 CTGGTGGTACTGGAGTCCTG 59.102 60.000 14.16 14.16 0.00 3.86
2214 2432 0.487772 ACTGGTGGTACTGGAGTCCT 59.512 55.000 11.33 0.00 0.00 3.85
2215 2433 0.608640 CACTGGTGGTACTGGAGTCC 59.391 60.000 0.73 0.73 0.00 3.85
2216 2434 0.037232 GCACTGGTGGTACTGGAGTC 60.037 60.000 2.84 0.00 0.00 3.36
2252 2470 4.818642 CTGTGCATGTATAGGGAGAGATG 58.181 47.826 0.00 0.00 0.00 2.90
2253 2471 3.260380 GCTGTGCATGTATAGGGAGAGAT 59.740 47.826 9.47 0.00 0.00 2.75
2281 2501 2.235016 CCTCTACTACTGGCTAGCTGG 58.765 57.143 15.72 10.10 0.00 4.85
2289 2509 2.353803 GGCACAACACCTCTACTACTGG 60.354 54.545 0.00 0.00 0.00 4.00
2290 2510 2.563179 AGGCACAACACCTCTACTACTG 59.437 50.000 0.00 0.00 28.76 2.74
2291 2511 2.890814 AGGCACAACACCTCTACTACT 58.109 47.619 0.00 0.00 28.76 2.57
2292 2512 3.427233 CGTAGGCACAACACCTCTACTAC 60.427 52.174 0.00 0.00 38.81 2.73
2293 2513 2.751259 CGTAGGCACAACACCTCTACTA 59.249 50.000 0.00 0.00 38.81 1.82
2294 2514 1.544691 CGTAGGCACAACACCTCTACT 59.455 52.381 0.00 0.00 38.81 2.57
2295 2515 1.992170 CGTAGGCACAACACCTCTAC 58.008 55.000 0.00 0.00 38.81 2.59
2300 2520 0.739813 CCTAGCGTAGGCACAACACC 60.740 60.000 10.48 0.00 43.41 4.16
2304 2524 0.323999 TCCTCCTAGCGTAGGCACAA 60.324 55.000 10.48 0.00 45.82 3.33
2314 2534 0.397254 TGCCCACTACTCCTCCTAGC 60.397 60.000 0.00 0.00 0.00 3.42
2401 2630 4.299155 ACAGATAGACACGTCAGTTGTTG 58.701 43.478 0.00 0.00 0.00 3.33
2404 2633 4.376413 GCAAACAGATAGACACGTCAGTTG 60.376 45.833 0.00 0.00 0.00 3.16
2497 2726 1.972588 AGCAAATGGGGGAGTAGAGT 58.027 50.000 0.00 0.00 0.00 3.24
2498 2727 2.239654 TGAAGCAAATGGGGGAGTAGAG 59.760 50.000 0.00 0.00 0.00 2.43
2499 2728 2.274542 TGAAGCAAATGGGGGAGTAGA 58.725 47.619 0.00 0.00 0.00 2.59
2500 2729 2.806945 TGAAGCAAATGGGGGAGTAG 57.193 50.000 0.00 0.00 0.00 2.57
2501 2730 2.949963 GCATGAAGCAAATGGGGGAGTA 60.950 50.000 0.00 0.00 44.79 2.59
2502 2731 1.856629 CATGAAGCAAATGGGGGAGT 58.143 50.000 0.00 0.00 0.00 3.85
2503 2732 0.462789 GCATGAAGCAAATGGGGGAG 59.537 55.000 0.00 0.00 44.79 4.30
2504 2733 2.594342 GCATGAAGCAAATGGGGGA 58.406 52.632 0.00 0.00 44.79 4.81
2518 2757 6.128282 ACGGAGTAAAAGTAGAAACATGCATG 60.128 38.462 25.09 25.09 41.94 4.06
2519 2758 5.938125 ACGGAGTAAAAGTAGAAACATGCAT 59.062 36.000 0.00 0.00 41.94 3.96
2520 2759 5.302360 ACGGAGTAAAAGTAGAAACATGCA 58.698 37.500 0.00 0.00 41.94 3.96
2521 2760 5.857822 ACGGAGTAAAAGTAGAAACATGC 57.142 39.130 0.00 0.00 41.94 4.06
2630 2869 2.825836 GGGAGCATGGCGTTGGAG 60.826 66.667 0.00 0.00 0.00 3.86
2689 2933 1.363443 CAAAGGCAAGGCAAGCGAA 59.637 52.632 0.00 0.00 0.00 4.70
2690 2934 2.563798 CCAAAGGCAAGGCAAGCGA 61.564 57.895 0.00 0.00 0.00 4.93
2717 2961 2.364324 GAGTAGGTTGCATATCCGGTGA 59.636 50.000 0.00 0.00 0.00 4.02
2718 2962 2.548067 GGAGTAGGTTGCATATCCGGTG 60.548 54.545 0.00 0.00 0.00 4.94
2719 2963 1.692519 GGAGTAGGTTGCATATCCGGT 59.307 52.381 0.00 0.00 0.00 5.28
2720 2964 1.971357 AGGAGTAGGTTGCATATCCGG 59.029 52.381 0.00 0.00 31.97 5.14
2721 2965 3.393800 CAAGGAGTAGGTTGCATATCCG 58.606 50.000 0.00 0.00 31.97 4.18
2739 2983 8.492673 TCAAGTTATTACTATGTTCAGCCAAG 57.507 34.615 0.00 0.00 33.17 3.61
2740 2984 8.100791 ACTCAAGTTATTACTATGTTCAGCCAA 58.899 33.333 0.00 0.00 33.17 4.52
2741 2985 7.620880 ACTCAAGTTATTACTATGTTCAGCCA 58.379 34.615 0.00 0.00 33.17 4.75
2742 2986 8.494016 AACTCAAGTTATTACTATGTTCAGCC 57.506 34.615 0.00 0.00 36.32 4.85
2783 3040 5.174395 GCTATCCATGTTCAGCTATAGGTG 58.826 45.833 23.17 23.17 44.29 4.00
2800 3061 7.705752 GGACAGTTACTAGTAAAAGTGCTATCC 59.294 40.741 22.18 16.69 29.00 2.59
2802 3063 8.363761 AGGACAGTTACTAGTAAAAGTGCTAT 57.636 34.615 26.84 14.00 33.98 2.97
2816 3082 9.787435 TCAATAACAATAACAAGGACAGTTACT 57.213 29.630 0.00 0.00 34.59 2.24
2817 3083 9.821662 GTCAATAACAATAACAAGGACAGTTAC 57.178 33.333 0.00 0.00 34.59 2.50
2818 3084 9.005777 GGTCAATAACAATAACAAGGACAGTTA 57.994 33.333 0.00 0.00 36.06 2.24
2876 3146 2.352814 GGACGTGTTCAGCTAGACACAT 60.353 50.000 23.55 13.99 32.25 3.21
2879 3149 1.617322 AGGACGTGTTCAGCTAGACA 58.383 50.000 0.00 0.00 0.00 3.41
2880 3150 2.726832 AAGGACGTGTTCAGCTAGAC 57.273 50.000 0.00 0.00 0.00 2.59
2881 3151 3.321111 AGAAAAGGACGTGTTCAGCTAGA 59.679 43.478 0.00 0.00 0.00 2.43
2882 3152 3.654414 AGAAAAGGACGTGTTCAGCTAG 58.346 45.455 0.00 0.00 0.00 3.42
2883 3153 3.746045 AGAAAAGGACGTGTTCAGCTA 57.254 42.857 0.00 0.00 0.00 3.32
2884 3154 2.614057 CAAGAAAAGGACGTGTTCAGCT 59.386 45.455 0.00 0.00 0.00 4.24
2885 3155 2.354821 ACAAGAAAAGGACGTGTTCAGC 59.645 45.455 0.00 0.00 0.00 4.26
2886 3156 4.616181 AACAAGAAAAGGACGTGTTCAG 57.384 40.909 0.00 0.00 35.77 3.02
2887 3157 6.687081 ATAAACAAGAAAAGGACGTGTTCA 57.313 33.333 0.00 0.00 38.51 3.18
2888 3158 7.980742 AAATAAACAAGAAAAGGACGTGTTC 57.019 32.000 0.00 0.00 38.51 3.18
3011 3281 5.297029 CGAAAGAAAAAGGTCCTGAGAAAGT 59.703 40.000 0.00 0.00 0.00 2.66
3052 3326 6.428083 TCATGTGTTCAAAACCCTCTACTA 57.572 37.500 0.00 0.00 0.00 1.82
3080 3354 0.804364 TGCGCATTTCAGCTTCGAAT 59.196 45.000 5.66 0.00 0.00 3.34
3106 3380 3.433306 TGTTAAGCAGGCAGTACCATT 57.567 42.857 0.00 0.00 43.14 3.16
3109 3383 2.683362 GGAATGTTAAGCAGGCAGTACC 59.317 50.000 0.00 0.00 39.61 3.34
3125 3399 4.008330 AGATTGAAGCAGTGACAGGAATG 58.992 43.478 0.00 0.00 0.00 2.67
3345 3623 3.760684 GTGGTGCAAGAGATGGAGATTTT 59.239 43.478 0.00 0.00 0.00 1.82
3352 3630 0.037303 ACCTGTGGTGCAAGAGATGG 59.963 55.000 0.00 0.00 32.98 3.51
3604 3891 0.879090 GGCCTAAACACGACTTTGGG 59.121 55.000 0.00 0.00 35.40 4.12
3615 3902 2.654749 GCCACAATCAAGGCCTAAAC 57.345 50.000 5.16 0.00 45.18 2.01
3636 3923 3.249189 GGACTGGGAGCACCACCA 61.249 66.667 1.58 0.00 46.80 4.17
3888 4187 1.183030 TGTGGTTCGTGGATCGGTCT 61.183 55.000 0.00 0.00 40.32 3.85
3945 4244 7.889469 AGTGGAGAACATTCGTTACTAGTTAA 58.111 34.615 0.00 0.00 34.75 2.01
4065 4367 7.040755 TCAGCATAACAGATTTCTTCCGAAAAA 60.041 33.333 0.00 0.00 42.03 1.94
4067 4369 5.937540 TCAGCATAACAGATTTCTTCCGAAA 59.062 36.000 0.00 0.00 42.83 3.46
4070 4372 5.801350 TTCAGCATAACAGATTTCTTCCG 57.199 39.130 0.00 0.00 0.00 4.30
4153 4463 2.977914 ACTGGCTGCTAATGTGTACTG 58.022 47.619 0.00 0.00 0.00 2.74
4158 4468 4.759782 ACTAGTTACTGGCTGCTAATGTG 58.240 43.478 0.00 0.00 0.00 3.21
4159 4469 5.069251 CCTACTAGTTACTGGCTGCTAATGT 59.931 44.000 0.00 0.00 0.00 2.71
4166 4479 2.748388 ACCCCTACTAGTTACTGGCTG 58.252 52.381 0.00 0.00 0.00 4.85
4167 4480 3.486653 AACCCCTACTAGTTACTGGCT 57.513 47.619 0.00 0.00 0.00 4.75
4168 4481 4.440663 CGTTAACCCCTACTAGTTACTGGC 60.441 50.000 0.00 0.00 0.00 4.85
4169 4482 4.949856 TCGTTAACCCCTACTAGTTACTGG 59.050 45.833 0.00 0.00 0.00 4.00
4218 4531 2.169789 CAGCAACCCGATCTGCTCG 61.170 63.158 4.31 0.00 45.79 5.03
4231 4544 0.179004 AACCCATCCACGTTCAGCAA 60.179 50.000 0.00 0.00 0.00 3.91
4396 4713 0.785979 GTGGCCACGTAACAGTAACG 59.214 55.000 22.49 0.00 45.64 3.18
4630 4947 2.237392 GGACTAGCACACTCCCATCTTT 59.763 50.000 0.00 0.00 0.00 2.52
4631 4948 1.834263 GGACTAGCACACTCCCATCTT 59.166 52.381 0.00 0.00 0.00 2.40
4632 4949 1.007721 AGGACTAGCACACTCCCATCT 59.992 52.381 0.00 0.00 0.00 2.90
4737 5054 4.626172 CCTAAGCTACGACCAAAAGAACTC 59.374 45.833 0.00 0.00 0.00 3.01
4738 5055 4.040095 ACCTAAGCTACGACCAAAAGAACT 59.960 41.667 0.00 0.00 0.00 3.01
4763 5080 5.129485 TGCAATCCCTTCCTTCTACTTCTAG 59.871 44.000 0.00 0.00 0.00 2.43
4770 5087 4.473196 TGTACATGCAATCCCTTCCTTCTA 59.527 41.667 0.00 0.00 0.00 2.10
4772 5089 3.620488 TGTACATGCAATCCCTTCCTTC 58.380 45.455 0.00 0.00 0.00 3.46
4773 5090 3.737559 TGTACATGCAATCCCTTCCTT 57.262 42.857 0.00 0.00 0.00 3.36
4774 5091 3.737559 TTGTACATGCAATCCCTTCCT 57.262 42.857 0.00 0.00 0.00 3.36
4775 5092 4.160252 ACATTTGTACATGCAATCCCTTCC 59.840 41.667 0.00 0.00 0.00 3.46
4801 5118 0.177373 TCTGCTGCTGCTCCTACATG 59.823 55.000 17.00 0.00 40.48 3.21
4835 5152 8.408601 ACGAATTTTCCCATTCTTGATTGATAG 58.591 33.333 0.00 0.00 31.81 2.08
4869 5186 1.664016 GCAAGCAAACAGATCCACACG 60.664 52.381 0.00 0.00 0.00 4.49
4897 5214 1.944032 CACATCATCCATGAGCGACA 58.056 50.000 0.00 0.00 40.64 4.35
4899 5216 2.996444 GCACATCATCCATGAGCGA 58.004 52.632 0.00 0.00 39.02 4.93
4901 5218 2.164827 TGTTTGCACATCATCCATGAGC 59.835 45.455 0.00 0.00 46.34 4.26
4902 5219 4.443913 TTGTTTGCACATCATCCATGAG 57.556 40.909 0.00 0.00 40.64 2.90
4910 5227 6.456501 TGAATCATCATTTGTTTGCACATCA 58.543 32.000 0.00 0.00 31.06 3.07
4941 5258 5.587033 AACACTTCGTTTCTTCCGTTATC 57.413 39.130 0.00 0.00 32.35 1.75
4942 5259 5.295045 ACAAACACTTCGTTTCTTCCGTTAT 59.705 36.000 0.00 0.00 44.78 1.89
4943 5260 4.630940 ACAAACACTTCGTTTCTTCCGTTA 59.369 37.500 0.00 0.00 44.78 3.18
4959 5276 0.310854 GCACACTGGCCTACAAACAC 59.689 55.000 3.32 0.00 0.00 3.32
4978 5295 5.235850 TCATCTAGTCTAGCTGTCTAGGG 57.764 47.826 9.90 11.44 42.01 3.53
4984 5301 6.265196 CCTTCATCTTCATCTAGTCTAGCTGT 59.735 42.308 9.90 0.00 0.00 4.40
4985 5302 6.489700 TCCTTCATCTTCATCTAGTCTAGCTG 59.510 42.308 0.00 4.60 0.00 4.24
4986 5303 6.609876 TCCTTCATCTTCATCTAGTCTAGCT 58.390 40.000 1.60 0.00 0.00 3.32
4987 5304 6.071952 CCTCCTTCATCTTCATCTAGTCTAGC 60.072 46.154 1.60 0.00 0.00 3.42
4988 5305 7.230747 TCCTCCTTCATCTTCATCTAGTCTAG 58.769 42.308 0.00 0.00 0.00 2.43
4989 5306 7.155442 TCCTCCTTCATCTTCATCTAGTCTA 57.845 40.000 0.00 0.00 0.00 2.59
4990 5307 6.024563 TCCTCCTTCATCTTCATCTAGTCT 57.975 41.667 0.00 0.00 0.00 3.24
4991 5308 5.243730 CCTCCTCCTTCATCTTCATCTAGTC 59.756 48.000 0.00 0.00 0.00 2.59
5047 5364 0.529555 GGCTTTCCAAAAGCGCACAA 60.530 50.000 11.47 0.00 43.89 3.33
5048 5365 1.067250 GGCTTTCCAAAAGCGCACA 59.933 52.632 11.47 0.00 43.89 4.57
5129 5450 0.704076 ACCTCTCTCTCTCAGTGCCT 59.296 55.000 0.00 0.00 0.00 4.75
5130 5451 1.102978 GACCTCTCTCTCTCAGTGCC 58.897 60.000 0.00 0.00 0.00 5.01
5131 5452 1.102978 GGACCTCTCTCTCTCAGTGC 58.897 60.000 0.00 0.00 0.00 4.40
5132 5453 1.339631 ACGGACCTCTCTCTCTCAGTG 60.340 57.143 0.00 0.00 0.00 3.66
5133 5454 0.988832 ACGGACCTCTCTCTCTCAGT 59.011 55.000 0.00 0.00 0.00 3.41
5134 5455 1.339631 ACACGGACCTCTCTCTCTCAG 60.340 57.143 0.00 0.00 0.00 3.35
5135 5456 0.693622 ACACGGACCTCTCTCTCTCA 59.306 55.000 0.00 0.00 0.00 3.27
5137 5458 0.391927 CGACACGGACCTCTCTCTCT 60.392 60.000 0.00 0.00 0.00 3.10
5138 5459 0.391395 TCGACACGGACCTCTCTCTC 60.391 60.000 0.00 0.00 0.00 3.20
5139 5460 0.391927 CTCGACACGGACCTCTCTCT 60.392 60.000 0.00 0.00 0.00 3.10
5161 5498 2.542907 CCTTGCCGACACACACACC 61.543 63.158 0.00 0.00 0.00 4.16
5267 5640 8.067189 CGAAAGAAAGAAAGAAAGGAGAGAAAG 58.933 37.037 0.00 0.00 0.00 2.62
5268 5641 7.012421 CCGAAAGAAAGAAAGAAAGGAGAGAAA 59.988 37.037 0.00 0.00 0.00 2.52
5269 5642 6.483640 CCGAAAGAAAGAAAGAAAGGAGAGAA 59.516 38.462 0.00 0.00 0.00 2.87
5270 5643 5.992217 CCGAAAGAAAGAAAGAAAGGAGAGA 59.008 40.000 0.00 0.00 0.00 3.10
5271 5644 5.760743 ACCGAAAGAAAGAAAGAAAGGAGAG 59.239 40.000 0.00 0.00 0.00 3.20
5272 5645 5.681639 ACCGAAAGAAAGAAAGAAAGGAGA 58.318 37.500 0.00 0.00 0.00 3.71
5273 5646 6.038271 TCAACCGAAAGAAAGAAAGAAAGGAG 59.962 38.462 0.00 0.00 0.00 3.69
5274 5647 5.883673 TCAACCGAAAGAAAGAAAGAAAGGA 59.116 36.000 0.00 0.00 0.00 3.36
5275 5648 6.038271 TCTCAACCGAAAGAAAGAAAGAAAGG 59.962 38.462 0.00 0.00 0.00 3.11
5276 5649 6.907748 GTCTCAACCGAAAGAAAGAAAGAAAG 59.092 38.462 0.00 0.00 0.00 2.62
5277 5650 6.456449 CGTCTCAACCGAAAGAAAGAAAGAAA 60.456 38.462 0.00 0.00 0.00 2.52
5278 5651 5.006358 CGTCTCAACCGAAAGAAAGAAAGAA 59.994 40.000 0.00 0.00 0.00 2.52
5279 5652 4.506654 CGTCTCAACCGAAAGAAAGAAAGA 59.493 41.667 0.00 0.00 0.00 2.52
5280 5653 4.762809 CGTCTCAACCGAAAGAAAGAAAG 58.237 43.478 0.00 0.00 0.00 2.62
5281 5654 3.001939 GCGTCTCAACCGAAAGAAAGAAA 59.998 43.478 0.00 0.00 0.00 2.52
5282 5655 2.542595 GCGTCTCAACCGAAAGAAAGAA 59.457 45.455 0.00 0.00 0.00 2.52
5283 5656 2.132762 GCGTCTCAACCGAAAGAAAGA 58.867 47.619 0.00 0.00 0.00 2.52
5313 5686 0.679321 GCCTTTGGAGGAAGCAGGAG 60.679 60.000 0.00 0.00 46.74 3.69
5315 5688 0.964358 CTGCCTTTGGAGGAAGCAGG 60.964 60.000 2.42 0.00 46.74 4.85
5316 5689 0.964358 CCTGCCTTTGGAGGAAGCAG 60.964 60.000 3.37 3.37 46.30 4.24
5317 5690 1.075482 CCTGCCTTTGGAGGAAGCA 59.925 57.895 0.00 0.00 46.30 3.91
5318 5691 0.251341 TTCCTGCCTTTGGAGGAAGC 60.251 55.000 10.98 0.00 46.30 3.86
5320 5693 1.444933 TCTTCCTGCCTTTGGAGGAA 58.555 50.000 13.80 13.80 46.74 3.36
5442 5820 0.106066 TCACATCCATGGCCATTCCC 60.106 55.000 17.92 0.00 0.00 3.97
5473 5852 1.125566 GCGCCTAAACAAGACGTACAC 59.874 52.381 0.00 0.00 0.00 2.90
5504 5885 9.627395 CCTTGAATAAACTATATCACGTAGGAG 57.373 37.037 0.00 0.00 0.00 3.69
5505 5886 9.358406 TCCTTGAATAAACTATATCACGTAGGA 57.642 33.333 0.00 0.00 28.68 2.94
5506 5887 9.627395 CTCCTTGAATAAACTATATCACGTAGG 57.373 37.037 0.00 0.00 0.00 3.18
5535 5916 5.403766 CACATATCCTATGCTGAACGAAGAC 59.596 44.000 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.