Multiple sequence alignment - TraesCS3A01G209100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G209100 chr3A 100.000 3602 0 0 1 3602 371320958 371324559 0.000000e+00 6652.0
1 TraesCS3A01G209100 chr3A 77.258 299 60 5 1549 1843 630807069 630807363 6.190000e-38 169.0
2 TraesCS3A01G209100 chr3D 95.041 2823 62 24 266 3065 283675097 283677864 0.000000e+00 4366.0
3 TraesCS3A01G209100 chr3D 81.818 220 28 6 3390 3601 120894990 120894775 1.330000e-39 174.0
4 TraesCS3A01G209100 chr3D 91.304 69 5 1 3390 3458 609835991 609836058 3.830000e-15 93.5
5 TraesCS3A01G209100 chr3D 95.000 40 2 0 3334 3373 600656383 600656422 3.000000e-06 63.9
6 TraesCS3A01G209100 chr3D 97.059 34 1 0 3239 3272 445621131 445621164 1.400000e-04 58.4
7 TraesCS3A01G209100 chr3D 100.000 28 0 0 1 28 43587246 43587219 6.000000e-03 52.8
8 TraesCS3A01G209100 chr3B 94.450 2883 70 29 266 3105 377709868 377712703 0.000000e+00 4355.0
9 TraesCS3A01G209100 chr3B 80.460 174 34 0 1670 1843 650071776 650071949 2.260000e-27 134.0
10 TraesCS3A01G209100 chr3B 93.220 59 4 0 3328 3386 446747980 446747922 1.780000e-13 87.9
11 TraesCS3A01G209100 chr3B 100.000 28 0 0 1 28 650967963 650967990 6.000000e-03 52.8
12 TraesCS3A01G209100 chr1A 81.468 1063 179 14 1539 2589 589791469 589792525 0.000000e+00 856.0
13 TraesCS3A01G209100 chr1D 80.957 1066 179 20 1539 2589 491794953 491796009 0.000000e+00 822.0
14 TraesCS3A01G209100 chr1B 80.316 1077 194 15 1539 2603 684098148 684097078 0.000000e+00 798.0
15 TraesCS3A01G209100 chr1B 96.774 31 1 0 1 31 56486316 56486286 6.000000e-03 52.8
16 TraesCS3A01G209100 chr5D 88.532 218 18 7 3390 3601 7030795 7031011 1.280000e-64 257.0
17 TraesCS3A01G209100 chr7D 88.462 208 18 4 3390 3592 506898635 506898841 2.780000e-61 246.0
18 TraesCS3A01G209100 chr7D 90.164 61 6 0 3237 3297 16208034 16207974 2.980000e-11 80.5
19 TraesCS3A01G209100 chr7D 100.000 28 0 0 1 28 228242320 228242347 6.000000e-03 52.8
20 TraesCS3A01G209100 chr5B 85.915 213 22 4 3390 3601 600059879 600059674 1.680000e-53 220.0
21 TraesCS3A01G209100 chr5B 94.595 37 2 0 3343 3379 433802163 433802199 1.400000e-04 58.4
22 TraesCS3A01G209100 chr5B 100.000 29 0 0 1 29 510889239 510889267 2.000000e-03 54.7
23 TraesCS3A01G209100 chr5B 100.000 29 0 0 3343 3371 606838231 606838259 2.000000e-03 54.7
24 TraesCS3A01G209100 chr5B 100.000 29 0 0 3343 3371 606845397 606845425 2.000000e-03 54.7
25 TraesCS3A01G209100 chr5B 100.000 28 0 0 1 28 441446788 441446815 6.000000e-03 52.8
26 TraesCS3A01G209100 chr2D 88.571 175 17 3 3429 3601 107573034 107572861 3.640000e-50 209.0
27 TraesCS3A01G209100 chr2D 97.297 37 1 0 3329 3365 639824907 639824871 3.000000e-06 63.9
28 TraesCS3A01G209100 chr7A 93.258 89 6 0 3512 3600 700066251 700066339 8.110000e-27 132.0
29 TraesCS3A01G209100 chr7A 85.455 110 8 5 3105 3213 631655986 631655884 1.370000e-19 108.0
30 TraesCS3A01G209100 chr7A 87.302 63 8 0 3328 3390 621504379 621504441 4.990000e-09 73.1
31 TraesCS3A01G209100 chr7A 89.362 47 5 0 3245 3291 642033955 642033909 3.880000e-05 60.2
32 TraesCS3A01G209100 chr7A 100.000 28 0 0 1 28 700786105 700786078 6.000000e-03 52.8
33 TraesCS3A01G209100 chr4A 89.655 58 6 0 3331 3388 628513297 628513240 1.390000e-09 75.0
34 TraesCS3A01G209100 chr4A 97.059 34 0 1 52 85 673796995 673797027 5.020000e-04 56.5
35 TraesCS3A01G209100 chr7B 91.667 48 4 0 3245 3292 84505191 84505144 2.320000e-07 67.6
36 TraesCS3A01G209100 chr5A 91.489 47 4 0 3342 3388 678207338 678207384 8.350000e-07 65.8
37 TraesCS3A01G209100 chrUn 100.000 30 0 0 3259 3288 136334720 136334749 5.020000e-04 56.5
38 TraesCS3A01G209100 chr4B 100.000 28 0 0 1 28 612251118 612251091 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G209100 chr3A 371320958 371324559 3601 False 6652 6652 100.000 1 3602 1 chr3A.!!$F1 3601
1 TraesCS3A01G209100 chr3D 283675097 283677864 2767 False 4366 4366 95.041 266 3065 1 chr3D.!!$F1 2799
2 TraesCS3A01G209100 chr3B 377709868 377712703 2835 False 4355 4355 94.450 266 3105 1 chr3B.!!$F1 2839
3 TraesCS3A01G209100 chr1A 589791469 589792525 1056 False 856 856 81.468 1539 2589 1 chr1A.!!$F1 1050
4 TraesCS3A01G209100 chr1D 491794953 491796009 1056 False 822 822 80.957 1539 2589 1 chr1D.!!$F1 1050
5 TraesCS3A01G209100 chr1B 684097078 684098148 1070 True 798 798 80.316 1539 2603 1 chr1B.!!$R2 1064

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
233 234 0.036306 AGCGAAACCCTTGAACGGAT 59.964 50.0 0.0 0.0 0.0 4.18 F
234 235 0.168128 GCGAAACCCTTGAACGGATG 59.832 55.0 0.0 0.0 0.0 3.51 F
263 264 0.036306 AACAGATGAACGTGGGTCCC 59.964 55.0 0.0 0.0 0.0 4.46 F
264 265 0.836400 ACAGATGAACGTGGGTCCCT 60.836 55.0 10.0 0.0 0.0 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1653 1680 1.227060 CGCCTCGCAGATCATGTCA 60.227 57.895 0.00 0.0 33.89 3.58 R
1830 1857 3.749064 GCACCGCAGACCTCGAGA 61.749 66.667 15.71 0.0 0.00 4.04 R
2523 2556 2.922503 TCCTGCTTGGCGGTCTCA 60.923 61.111 0.00 0.0 32.22 3.27 R
2658 2692 2.032808 CCTAGCGGCTAAAAGAATTCGC 60.033 50.000 11.39 0.0 42.91 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 1.048601 TCCGAATGGAGGGAGTATGC 58.951 55.000 0.00 0.00 40.17 3.14
29 30 0.758734 CCGAATGGAGGGAGTATGCA 59.241 55.000 0.00 0.00 37.49 3.96
30 31 1.349026 CCGAATGGAGGGAGTATGCAT 59.651 52.381 3.79 3.79 37.49 3.96
31 32 2.224621 CCGAATGGAGGGAGTATGCATT 60.225 50.000 3.54 0.00 40.83 3.56
32 33 3.007940 CCGAATGGAGGGAGTATGCATTA 59.992 47.826 3.54 0.00 38.61 1.90
33 34 3.997021 CGAATGGAGGGAGTATGCATTAC 59.003 47.826 3.54 1.13 38.61 1.89
34 35 3.685139 ATGGAGGGAGTATGCATTACG 57.315 47.619 3.54 0.00 35.84 3.18
35 36 1.691976 TGGAGGGAGTATGCATTACGG 59.308 52.381 3.54 0.00 35.84 4.02
36 37 1.968493 GGAGGGAGTATGCATTACGGA 59.032 52.381 3.54 0.00 35.84 4.69
37 38 2.028930 GGAGGGAGTATGCATTACGGAG 60.029 54.545 3.54 0.00 35.84 4.63
38 39 1.971357 AGGGAGTATGCATTACGGAGG 59.029 52.381 3.54 0.00 35.84 4.30
39 40 1.002087 GGGAGTATGCATTACGGAGGG 59.998 57.143 3.54 0.00 35.84 4.30
40 41 1.692519 GGAGTATGCATTACGGAGGGT 59.307 52.381 3.54 0.00 35.84 4.34
41 42 2.548067 GGAGTATGCATTACGGAGGGTG 60.548 54.545 3.54 0.00 35.84 4.61
42 43 2.102588 GAGTATGCATTACGGAGGGTGT 59.897 50.000 3.54 0.00 35.84 4.16
43 44 3.302161 AGTATGCATTACGGAGGGTGTA 58.698 45.455 3.54 0.00 35.84 2.90
44 45 3.901844 AGTATGCATTACGGAGGGTGTAT 59.098 43.478 3.54 0.00 35.84 2.29
45 46 2.902705 TGCATTACGGAGGGTGTATC 57.097 50.000 0.00 0.00 0.00 2.24
46 47 2.112190 TGCATTACGGAGGGTGTATCA 58.888 47.619 0.00 0.00 0.00 2.15
47 48 2.703536 TGCATTACGGAGGGTGTATCAT 59.296 45.455 0.00 0.00 0.00 2.45
48 49 3.067106 GCATTACGGAGGGTGTATCATG 58.933 50.000 0.00 0.00 0.00 3.07
49 50 3.494398 GCATTACGGAGGGTGTATCATGT 60.494 47.826 0.00 0.00 0.00 3.21
50 51 3.812156 TTACGGAGGGTGTATCATGTG 57.188 47.619 0.00 0.00 0.00 3.21
51 52 0.178068 ACGGAGGGTGTATCATGTGC 59.822 55.000 0.00 0.00 0.00 4.57
52 53 0.177836 CGGAGGGTGTATCATGTGCA 59.822 55.000 0.00 0.00 0.00 4.57
53 54 1.202687 CGGAGGGTGTATCATGTGCAT 60.203 52.381 0.00 0.00 0.00 3.96
54 55 2.224606 GGAGGGTGTATCATGTGCATG 58.775 52.381 5.86 5.86 40.09 4.06
87 88 9.857656 AAATATGATACTATCCATTATGGGCAG 57.142 33.333 11.76 10.82 38.32 4.85
88 89 6.898171 ATGATACTATCCATTATGGGCAGT 57.102 37.500 11.76 15.61 38.32 4.40
89 90 6.299805 TGATACTATCCATTATGGGCAGTC 57.700 41.667 17.58 8.85 38.32 3.51
90 91 5.784906 TGATACTATCCATTATGGGCAGTCA 59.215 40.000 17.58 10.69 38.32 3.41
91 92 6.272090 TGATACTATCCATTATGGGCAGTCAA 59.728 38.462 17.58 6.53 38.32 3.18
92 93 4.978099 ACTATCCATTATGGGCAGTCAAG 58.022 43.478 11.76 1.97 38.32 3.02
93 94 4.660303 ACTATCCATTATGGGCAGTCAAGA 59.340 41.667 11.76 0.00 38.32 3.02
94 95 4.736611 ATCCATTATGGGCAGTCAAGAT 57.263 40.909 11.76 0.00 38.32 2.40
95 96 4.090761 TCCATTATGGGCAGTCAAGATC 57.909 45.455 11.76 0.00 38.32 2.75
96 97 3.718434 TCCATTATGGGCAGTCAAGATCT 59.282 43.478 11.76 0.00 38.32 2.75
97 98 4.907269 TCCATTATGGGCAGTCAAGATCTA 59.093 41.667 11.76 0.00 38.32 1.98
98 99 4.999950 CCATTATGGGCAGTCAAGATCTAC 59.000 45.833 2.72 0.00 32.67 2.59
99 100 2.898729 ATGGGCAGTCAAGATCTACG 57.101 50.000 0.00 0.00 0.00 3.51
100 101 0.824109 TGGGCAGTCAAGATCTACGG 59.176 55.000 0.00 0.00 0.00 4.02
101 102 1.112113 GGGCAGTCAAGATCTACGGA 58.888 55.000 0.00 0.00 0.00 4.69
102 103 1.689273 GGGCAGTCAAGATCTACGGAT 59.311 52.381 0.00 0.00 34.45 4.18
103 104 2.891580 GGGCAGTCAAGATCTACGGATA 59.108 50.000 0.00 0.00 31.46 2.59
104 105 3.511934 GGGCAGTCAAGATCTACGGATAT 59.488 47.826 0.00 0.00 31.46 1.63
105 106 4.021016 GGGCAGTCAAGATCTACGGATATT 60.021 45.833 0.00 0.00 34.19 1.28
106 107 5.511545 GGGCAGTCAAGATCTACGGATATTT 60.512 44.000 0.00 0.00 31.88 1.40
107 108 5.992217 GGCAGTCAAGATCTACGGATATTTT 59.008 40.000 0.00 0.00 31.88 1.82
108 109 7.152645 GGCAGTCAAGATCTACGGATATTTTA 58.847 38.462 0.00 0.00 31.88 1.52
109 110 7.656137 GGCAGTCAAGATCTACGGATATTTTAA 59.344 37.037 0.00 0.00 31.88 1.52
110 111 9.209175 GCAGTCAAGATCTACGGATATTTTAAT 57.791 33.333 0.00 0.00 31.88 1.40
128 129 8.684386 ATTTTAATTTTTCAAAATCCACGGGT 57.316 26.923 0.00 0.00 37.62 5.28
129 130 9.780186 ATTTTAATTTTTCAAAATCCACGGGTA 57.220 25.926 0.00 0.00 37.62 3.69
130 131 9.780186 TTTTAATTTTTCAAAATCCACGGGTAT 57.220 25.926 0.00 0.00 37.62 2.73
131 132 9.780186 TTTAATTTTTCAAAATCCACGGGTATT 57.220 25.926 0.00 0.00 37.62 1.89
132 133 9.780186 TTAATTTTTCAAAATCCACGGGTATTT 57.220 25.926 0.00 0.00 37.62 1.40
133 134 8.684386 AATTTTTCAAAATCCACGGGTATTTT 57.316 26.923 0.00 0.00 37.62 1.82
134 135 9.780186 AATTTTTCAAAATCCACGGGTATTTTA 57.220 25.926 0.18 0.00 37.62 1.52
135 136 9.780186 ATTTTTCAAAATCCACGGGTATTTTAA 57.220 25.926 0.18 0.00 33.54 1.52
136 137 9.780186 TTTTTCAAAATCCACGGGTATTTTAAT 57.220 25.926 0.18 0.00 34.40 1.40
137 138 9.780186 TTTTCAAAATCCACGGGTATTTTAATT 57.220 25.926 0.18 0.00 34.40 1.40
138 139 9.780186 TTTCAAAATCCACGGGTATTTTAATTT 57.220 25.926 0.18 0.00 34.40 1.82
139 140 9.780186 TTCAAAATCCACGGGTATTTTAATTTT 57.220 25.926 0.18 0.00 34.40 1.82
140 141 9.780186 TCAAAATCCACGGGTATTTTAATTTTT 57.220 25.926 0.18 0.00 34.40 1.94
142 143 9.780186 AAAATCCACGGGTATTTTAATTTTTCA 57.220 25.926 0.00 0.00 34.40 2.69
143 144 9.952030 AAATCCACGGGTATTTTAATTTTTCAT 57.048 25.926 0.00 0.00 0.00 2.57
144 145 8.940768 ATCCACGGGTATTTTAATTTTTCATG 57.059 30.769 0.00 0.00 0.00 3.07
145 146 6.814146 TCCACGGGTATTTTAATTTTTCATGC 59.186 34.615 0.00 0.00 0.00 4.06
146 147 6.036626 CCACGGGTATTTTAATTTTTCATGCC 59.963 38.462 0.00 0.00 0.00 4.40
147 148 6.036626 CACGGGTATTTTAATTTTTCATGCCC 59.963 38.462 0.00 0.00 36.64 5.36
148 149 6.070481 ACGGGTATTTTAATTTTTCATGCCCT 60.070 34.615 0.00 0.00 37.57 5.19
149 150 6.821160 CGGGTATTTTAATTTTTCATGCCCTT 59.179 34.615 0.00 0.00 37.57 3.95
150 151 7.982354 CGGGTATTTTAATTTTTCATGCCCTTA 59.018 33.333 0.00 0.00 37.57 2.69
151 152 9.845740 GGGTATTTTAATTTTTCATGCCCTTAT 57.154 29.630 0.00 0.00 36.95 1.73
160 161 6.773976 TTTTCATGCCCTTATCTTAACAGG 57.226 37.500 0.00 0.00 0.00 4.00
161 162 5.450818 TTCATGCCCTTATCTTAACAGGT 57.549 39.130 0.00 0.00 0.00 4.00
162 163 5.450818 TCATGCCCTTATCTTAACAGGTT 57.549 39.130 0.00 0.00 0.00 3.50
163 164 6.569127 TCATGCCCTTATCTTAACAGGTTA 57.431 37.500 0.00 0.00 0.00 2.85
164 165 6.964464 TCATGCCCTTATCTTAACAGGTTAA 58.036 36.000 4.70 4.70 34.28 2.01
165 166 6.826741 TCATGCCCTTATCTTAACAGGTTAAC 59.173 38.462 0.00 0.00 32.26 2.01
166 167 6.129414 TGCCCTTATCTTAACAGGTTAACA 57.871 37.500 8.10 0.00 32.26 2.41
167 168 6.177610 TGCCCTTATCTTAACAGGTTAACAG 58.822 40.000 8.10 1.77 32.26 3.16
168 169 5.589050 GCCCTTATCTTAACAGGTTAACAGG 59.411 44.000 8.10 0.96 32.26 4.00
169 170 6.120220 CCCTTATCTTAACAGGTTAACAGGG 58.880 44.000 8.10 6.41 32.50 4.45
170 171 6.296836 CCCTTATCTTAACAGGTTAACAGGGT 60.297 42.308 8.10 0.00 33.52 4.34
171 172 7.173032 CCTTATCTTAACAGGTTAACAGGGTT 58.827 38.462 8.10 10.34 32.26 4.11
172 173 7.668469 CCTTATCTTAACAGGTTAACAGGGTTT 59.332 37.037 8.10 0.00 32.26 3.27
173 174 8.999905 TTATCTTAACAGGTTAACAGGGTTTT 57.000 30.769 8.10 0.00 32.26 2.43
174 175 7.907841 ATCTTAACAGGTTAACAGGGTTTTT 57.092 32.000 8.10 0.00 32.26 1.94
175 176 8.999905 ATCTTAACAGGTTAACAGGGTTTTTA 57.000 30.769 8.10 0.00 32.26 1.52
176 177 8.224389 TCTTAACAGGTTAACAGGGTTTTTAC 57.776 34.615 8.10 0.00 32.26 2.01
177 178 5.857471 AACAGGTTAACAGGGTTTTTACC 57.143 39.130 8.10 0.00 0.00 2.85
178 179 6.323482 TTAACAGGTTAACAGGGTTTTTACCC 59.677 38.462 8.10 5.18 38.80 3.69
179 180 8.815343 TTAACAGGTTAACAGGGTTTTTACCCG 61.815 40.741 8.10 5.84 40.96 5.28
184 185 4.826248 GGGTTTTTACCCGCTGGA 57.174 55.556 0.00 0.00 40.59 3.86
185 186 3.276281 GGGTTTTTACCCGCTGGAT 57.724 52.632 0.00 0.00 40.59 3.41
186 187 1.552578 GGGTTTTTACCCGCTGGATT 58.447 50.000 0.00 0.00 40.59 3.01
187 188 1.475280 GGGTTTTTACCCGCTGGATTC 59.525 52.381 0.00 0.00 40.59 2.52
188 189 1.131693 GGTTTTTACCCGCTGGATTCG 59.868 52.381 0.00 0.00 34.81 3.34
189 190 1.808343 GTTTTTACCCGCTGGATTCGT 59.192 47.619 0.00 0.00 34.81 3.85
190 191 1.444836 TTTTACCCGCTGGATTCGTG 58.555 50.000 0.00 0.00 34.81 4.35
191 192 0.391927 TTTACCCGCTGGATTCGTGG 60.392 55.000 0.00 0.00 34.81 4.94
193 194 4.096003 CCCGCTGGATTCGTGGGT 62.096 66.667 6.37 0.00 45.18 4.51
194 195 2.727392 CCCGCTGGATTCGTGGGTA 61.727 63.158 6.37 0.00 45.18 3.69
195 196 1.520787 CCGCTGGATTCGTGGGTAC 60.521 63.158 0.00 0.00 0.00 3.34
215 216 3.024431 GGGACGCCCTAGAGACTAG 57.976 63.158 7.58 0.00 41.34 2.57
216 217 1.174078 GGGACGCCCTAGAGACTAGC 61.174 65.000 7.58 0.00 41.34 3.42
221 222 2.495409 GCCCTAGAGACTAGCGAAAC 57.505 55.000 0.00 0.00 0.00 2.78
222 223 1.067364 GCCCTAGAGACTAGCGAAACC 59.933 57.143 0.00 0.00 0.00 3.27
223 224 1.682323 CCCTAGAGACTAGCGAAACCC 59.318 57.143 0.00 0.00 0.00 4.11
224 225 2.657143 CCTAGAGACTAGCGAAACCCT 58.343 52.381 0.00 0.00 0.00 4.34
225 226 3.025262 CCTAGAGACTAGCGAAACCCTT 58.975 50.000 0.00 0.00 0.00 3.95
226 227 3.181485 CCTAGAGACTAGCGAAACCCTTG 60.181 52.174 0.00 0.00 0.00 3.61
227 228 2.526432 AGAGACTAGCGAAACCCTTGA 58.474 47.619 0.00 0.00 0.00 3.02
228 229 2.897969 AGAGACTAGCGAAACCCTTGAA 59.102 45.455 0.00 0.00 0.00 2.69
229 230 2.994578 GAGACTAGCGAAACCCTTGAAC 59.005 50.000 0.00 0.00 0.00 3.18
230 231 1.725164 GACTAGCGAAACCCTTGAACG 59.275 52.381 0.00 0.00 0.00 3.95
231 232 1.076332 CTAGCGAAACCCTTGAACGG 58.924 55.000 0.00 0.00 0.00 4.44
232 233 0.680618 TAGCGAAACCCTTGAACGGA 59.319 50.000 0.00 0.00 0.00 4.69
233 234 0.036306 AGCGAAACCCTTGAACGGAT 59.964 50.000 0.00 0.00 0.00 4.18
234 235 0.168128 GCGAAACCCTTGAACGGATG 59.832 55.000 0.00 0.00 0.00 3.51
235 236 1.803334 CGAAACCCTTGAACGGATGA 58.197 50.000 0.00 0.00 0.00 2.92
236 237 2.147958 CGAAACCCTTGAACGGATGAA 58.852 47.619 0.00 0.00 0.00 2.57
237 238 2.095919 CGAAACCCTTGAACGGATGAAC 60.096 50.000 0.00 0.00 0.00 3.18
238 239 2.649531 AACCCTTGAACGGATGAACA 57.350 45.000 0.00 0.00 0.00 3.18
239 240 2.649531 ACCCTTGAACGGATGAACAA 57.350 45.000 0.00 0.00 0.00 2.83
240 241 3.154827 ACCCTTGAACGGATGAACAAT 57.845 42.857 0.00 0.00 0.00 2.71
241 242 3.081804 ACCCTTGAACGGATGAACAATC 58.918 45.455 0.00 0.00 34.19 2.67
242 243 2.095853 CCCTTGAACGGATGAACAATCG 59.904 50.000 0.00 0.00 35.99 3.34
243 244 3.000041 CCTTGAACGGATGAACAATCGA 59.000 45.455 0.00 0.00 35.99 3.59
244 245 3.435327 CCTTGAACGGATGAACAATCGAA 59.565 43.478 0.00 0.00 35.99 3.71
245 246 4.083537 CCTTGAACGGATGAACAATCGAAA 60.084 41.667 0.00 0.00 35.99 3.46
246 247 4.398549 TGAACGGATGAACAATCGAAAC 57.601 40.909 0.00 0.00 35.99 2.78
247 248 3.810386 TGAACGGATGAACAATCGAAACA 59.190 39.130 0.00 0.00 35.99 2.83
248 249 4.084066 TGAACGGATGAACAATCGAAACAG 60.084 41.667 0.00 0.00 35.99 3.16
249 250 3.659786 ACGGATGAACAATCGAAACAGA 58.340 40.909 0.00 0.00 35.99 3.41
250 251 4.253685 ACGGATGAACAATCGAAACAGAT 58.746 39.130 0.00 0.00 35.99 2.90
251 252 4.093408 ACGGATGAACAATCGAAACAGATG 59.907 41.667 0.00 0.00 35.99 2.90
252 253 4.329801 CGGATGAACAATCGAAACAGATGA 59.670 41.667 0.00 0.00 35.99 2.92
253 254 5.163864 CGGATGAACAATCGAAACAGATGAA 60.164 40.000 0.00 0.00 35.99 2.57
254 255 6.024049 GGATGAACAATCGAAACAGATGAAC 58.976 40.000 0.00 0.00 35.99 3.18
255 256 5.017484 TGAACAATCGAAACAGATGAACG 57.983 39.130 0.00 0.00 0.00 3.95
256 257 4.509970 TGAACAATCGAAACAGATGAACGT 59.490 37.500 0.00 0.00 0.00 3.99
257 258 4.389664 ACAATCGAAACAGATGAACGTG 57.610 40.909 0.00 0.00 0.00 4.49
258 259 3.186409 ACAATCGAAACAGATGAACGTGG 59.814 43.478 0.00 0.00 0.00 4.94
259 260 1.790755 TCGAAACAGATGAACGTGGG 58.209 50.000 0.00 0.00 0.00 4.61
260 261 1.069513 TCGAAACAGATGAACGTGGGT 59.930 47.619 0.00 0.00 0.00 4.51
261 262 1.459592 CGAAACAGATGAACGTGGGTC 59.540 52.381 0.00 0.00 0.00 4.46
262 263 1.804748 GAAACAGATGAACGTGGGTCC 59.195 52.381 0.00 0.00 0.00 4.46
263 264 0.036306 AACAGATGAACGTGGGTCCC 59.964 55.000 0.00 0.00 0.00 4.46
264 265 0.836400 ACAGATGAACGTGGGTCCCT 60.836 55.000 10.00 0.00 0.00 4.20
386 387 1.008995 GCTCTCGATCTCACCGCTC 60.009 63.158 0.00 0.00 0.00 5.03
415 416 5.752955 CCTACCACCAAATTTTGACAGTTTG 59.247 40.000 10.72 0.00 33.72 2.93
417 418 6.287589 ACCACCAAATTTTGACAGTTTGTA 57.712 33.333 10.72 0.00 32.41 2.41
418 419 6.103330 ACCACCAAATTTTGACAGTTTGTAC 58.897 36.000 10.72 0.00 32.41 2.90
419 420 6.102663 CCACCAAATTTTGACAGTTTGTACA 58.897 36.000 10.72 0.00 32.41 2.90
420 421 6.035542 CCACCAAATTTTGACAGTTTGTACAC 59.964 38.462 10.72 0.00 32.41 2.90
424 425 7.646130 CCAAATTTTGACAGTTTGTACACGTAT 59.354 33.333 10.72 0.00 32.41 3.06
525 543 1.632018 CGCTAGTCCCCATTCCCCAA 61.632 60.000 0.00 0.00 0.00 4.12
551 569 2.125350 GCTGTGCCGAGAAGAGGG 60.125 66.667 0.00 0.00 0.00 4.30
747 765 2.359107 CGCTTTCCTGCTGCCTCA 60.359 61.111 0.00 0.00 0.00 3.86
769 787 3.517500 ACCTTCCTTGTCCAAAAAGCAAA 59.482 39.130 0.00 0.00 0.00 3.68
827 845 3.000078 CGCATCACGCCGTATTTATATCC 60.000 47.826 0.00 0.00 37.30 2.59
888 906 1.066858 TCACAGGACGCTCATTTCTCC 60.067 52.381 0.00 0.00 0.00 3.71
900 918 3.468770 TCATTTCTCCCGTTTCGTTTCA 58.531 40.909 0.00 0.00 0.00 2.69
912 935 3.740044 TTCGTTTCATCTTCAATCGCC 57.260 42.857 0.00 0.00 0.00 5.54
1016 1040 2.223829 CGTATATGAGATCCCCATCCGC 60.224 54.545 1.90 0.00 0.00 5.54
1653 1680 3.325201 GATGGGCCGGGAGACGTTT 62.325 63.158 2.18 0.00 42.24 3.60
1830 1857 1.518056 CCACATGCCACAAGCTCGTT 61.518 55.000 0.00 0.00 44.23 3.85
2484 2517 3.119096 GAGGTCCCGTTTGCGCTC 61.119 66.667 9.73 0.00 36.67 5.03
2523 2556 1.985116 GGAGACCCCTGTTCGCTCT 60.985 63.158 0.00 0.00 0.00 4.09
2634 2668 2.911926 GCCCTCTCCTTGGCTTGGT 61.912 63.158 0.00 0.00 44.46 3.67
2635 2669 1.562672 GCCCTCTCCTTGGCTTGGTA 61.563 60.000 0.00 0.00 44.46 3.25
2636 2670 0.253327 CCCTCTCCTTGGCTTGGTAC 59.747 60.000 0.00 0.00 0.00 3.34
2637 2671 0.984230 CCTCTCCTTGGCTTGGTACA 59.016 55.000 0.00 0.00 0.00 2.90
2638 2672 1.065854 CCTCTCCTTGGCTTGGTACAG 60.066 57.143 0.00 0.00 42.39 2.74
2639 2673 1.902508 CTCTCCTTGGCTTGGTACAGA 59.097 52.381 0.00 0.00 42.39 3.41
2640 2674 2.503356 CTCTCCTTGGCTTGGTACAGAT 59.497 50.000 0.00 0.00 42.39 2.90
2641 2675 3.706594 CTCTCCTTGGCTTGGTACAGATA 59.293 47.826 0.00 0.00 42.39 1.98
2642 2676 4.101114 TCTCCTTGGCTTGGTACAGATAA 58.899 43.478 0.00 0.00 42.39 1.75
2643 2677 4.534500 TCTCCTTGGCTTGGTACAGATAAA 59.466 41.667 0.00 0.00 42.39 1.40
2708 2742 8.357402 AGAACATTTTGTTAGGATTTGTACACC 58.643 33.333 0.00 0.00 41.28 4.16
2764 2798 3.500680 TCTGTGGAAAATTTCGGCAGTAC 59.499 43.478 19.58 0.00 35.25 2.73
2873 2916 4.801891 AGCATTTCTAGTGTGTTGCATTG 58.198 39.130 0.00 0.00 32.66 2.82
2892 2935 3.232213 TGTGTACGCCATTCTCTCTTC 57.768 47.619 3.51 0.00 0.00 2.87
2906 2950 3.119673 TCTCTCTTCAACGACATGCTCTC 60.120 47.826 0.00 0.00 0.00 3.20
2908 2952 2.922387 CTCTTCAACGACATGCTCTCAG 59.078 50.000 0.00 0.00 0.00 3.35
2909 2953 1.392853 CTTCAACGACATGCTCTCAGC 59.607 52.381 0.00 0.00 42.82 4.26
2910 2954 0.605083 TCAACGACATGCTCTCAGCT 59.395 50.000 0.00 0.00 42.97 4.24
2911 2955 0.720027 CAACGACATGCTCTCAGCTG 59.280 55.000 7.63 7.63 42.97 4.24
2912 2956 0.605083 AACGACATGCTCTCAGCTGA 59.395 50.000 17.19 17.19 42.97 4.26
2913 2957 0.108898 ACGACATGCTCTCAGCTGAC 60.109 55.000 13.74 3.82 42.97 3.51
2929 2981 1.048160 TGACCATGCTGGATCGGCTA 61.048 55.000 8.91 0.00 40.96 3.93
2943 2995 1.516603 GGCTAGTCCGCTCGTTGTC 60.517 63.158 0.00 0.00 0.00 3.18
3007 3059 6.293955 CGGGCGAACAAATTCAGGATATATTT 60.294 38.462 0.00 0.00 34.14 1.40
3036 3088 5.750352 TTTTAGGACAATCTAAGGGACGT 57.250 39.130 0.00 0.00 31.73 4.34
3044 3096 1.927487 TCTAAGGGACGTGGCTGTTA 58.073 50.000 0.00 0.00 0.00 2.41
3049 3101 2.394632 AGGGACGTGGCTGTTATGATA 58.605 47.619 0.00 0.00 0.00 2.15
3050 3102 2.972713 AGGGACGTGGCTGTTATGATAT 59.027 45.455 0.00 0.00 0.00 1.63
3052 3104 3.326747 GGACGTGGCTGTTATGATATCC 58.673 50.000 0.00 0.00 0.00 2.59
3105 3165 8.087750 TGATTGGTTAAAATTTCATCACCAGAC 58.912 33.333 9.44 8.72 35.73 3.51
3106 3166 7.595819 TTGGTTAAAATTTCATCACCAGACT 57.404 32.000 9.44 0.00 35.73 3.24
3107 3167 8.698973 TTGGTTAAAATTTCATCACCAGACTA 57.301 30.769 9.44 0.00 35.73 2.59
3108 3168 8.335532 TGGTTAAAATTTCATCACCAGACTAG 57.664 34.615 6.63 0.00 30.66 2.57
3109 3169 8.160765 TGGTTAAAATTTCATCACCAGACTAGA 58.839 33.333 0.00 0.00 30.66 2.43
3110 3170 9.010029 GGTTAAAATTTCATCACCAGACTAGAA 57.990 33.333 0.00 0.00 0.00 2.10
3112 3172 9.793259 TTAAAATTTCATCACCAGACTAGAAGT 57.207 29.630 0.00 0.00 0.00 3.01
3113 3173 7.678947 AAATTTCATCACCAGACTAGAAGTG 57.321 36.000 0.00 0.00 0.00 3.16
3114 3174 5.808366 TTTCATCACCAGACTAGAAGTGT 57.192 39.130 0.00 0.00 0.00 3.55
3115 3175 5.808366 TTCATCACCAGACTAGAAGTGTT 57.192 39.130 0.00 0.00 0.00 3.32
3116 3176 5.139435 TCATCACCAGACTAGAAGTGTTG 57.861 43.478 0.00 4.22 33.33 3.33
3117 3177 4.021104 TCATCACCAGACTAGAAGTGTTGG 60.021 45.833 0.00 5.92 36.29 3.77
3118 3178 3.572642 TCACCAGACTAGAAGTGTTGGA 58.427 45.455 11.95 0.00 34.75 3.53
3119 3179 3.321111 TCACCAGACTAGAAGTGTTGGAC 59.679 47.826 11.95 0.00 34.75 4.02
3120 3180 2.296471 ACCAGACTAGAAGTGTTGGACG 59.704 50.000 11.95 0.00 34.75 4.79
3121 3181 2.329379 CAGACTAGAAGTGTTGGACGC 58.671 52.381 0.00 0.00 0.00 5.19
3122 3182 1.068472 AGACTAGAAGTGTTGGACGCG 60.068 52.381 3.53 3.53 33.01 6.01
3123 3183 0.666577 ACTAGAAGTGTTGGACGCGC 60.667 55.000 5.73 0.00 33.01 6.86
3124 3184 0.388649 CTAGAAGTGTTGGACGCGCT 60.389 55.000 5.73 0.00 33.01 5.92
3125 3185 0.032952 TAGAAGTGTTGGACGCGCTT 59.967 50.000 5.73 0.00 39.11 4.68
3126 3186 0.814010 AGAAGTGTTGGACGCGCTTT 60.814 50.000 5.73 0.00 36.89 3.51
3127 3187 0.657368 GAAGTGTTGGACGCGCTTTG 60.657 55.000 5.73 0.00 36.89 2.77
3128 3188 2.662091 AAGTGTTGGACGCGCTTTGC 62.662 55.000 5.73 0.00 41.47 3.68
3129 3189 2.899838 TGTTGGACGCGCTTTGCT 60.900 55.556 5.73 0.00 43.27 3.91
3130 3190 2.427410 GTTGGACGCGCTTTGCTG 60.427 61.111 5.73 0.00 43.27 4.41
3131 3191 4.326766 TTGGACGCGCTTTGCTGC 62.327 61.111 5.73 0.00 43.27 5.25
3139 3199 2.026590 GCTTTGCTGCGCTGTTGT 59.973 55.556 16.05 0.00 0.00 3.32
3140 3200 1.589727 GCTTTGCTGCGCTGTTGTT 60.590 52.632 16.05 0.00 0.00 2.83
3141 3201 0.317770 GCTTTGCTGCGCTGTTGTTA 60.318 50.000 16.05 0.00 0.00 2.41
3142 3202 1.666888 GCTTTGCTGCGCTGTTGTTAT 60.667 47.619 16.05 0.00 0.00 1.89
3143 3203 2.664916 CTTTGCTGCGCTGTTGTTATT 58.335 42.857 16.05 0.00 0.00 1.40
3144 3204 2.049077 TTGCTGCGCTGTTGTTATTG 57.951 45.000 16.05 0.00 0.00 1.90
3145 3205 0.950836 TGCTGCGCTGTTGTTATTGT 59.049 45.000 16.05 0.00 0.00 2.71
3146 3206 1.336440 TGCTGCGCTGTTGTTATTGTT 59.664 42.857 16.05 0.00 0.00 2.83
3147 3207 1.715519 GCTGCGCTGTTGTTATTGTTG 59.284 47.619 16.05 0.00 0.00 3.33
3148 3208 2.858260 GCTGCGCTGTTGTTATTGTTGT 60.858 45.455 16.05 0.00 0.00 3.32
3149 3209 3.371168 CTGCGCTGTTGTTATTGTTGTT 58.629 40.909 9.73 0.00 0.00 2.83
3150 3210 3.111838 TGCGCTGTTGTTATTGTTGTTG 58.888 40.909 9.73 0.00 0.00 3.33
3151 3211 3.112580 GCGCTGTTGTTATTGTTGTTGT 58.887 40.909 0.00 0.00 0.00 3.32
3152 3212 3.549873 GCGCTGTTGTTATTGTTGTTGTT 59.450 39.130 0.00 0.00 0.00 2.83
3153 3213 4.735822 GCGCTGTTGTTATTGTTGTTGTTA 59.264 37.500 0.00 0.00 0.00 2.41
3154 3214 5.108405 GCGCTGTTGTTATTGTTGTTGTTAG 60.108 40.000 0.00 0.00 0.00 2.34
3155 3215 5.398122 CGCTGTTGTTATTGTTGTTGTTAGG 59.602 40.000 0.00 0.00 0.00 2.69
3156 3216 6.270064 GCTGTTGTTATTGTTGTTGTTAGGT 58.730 36.000 0.00 0.00 0.00 3.08
3157 3217 6.754675 GCTGTTGTTATTGTTGTTGTTAGGTT 59.245 34.615 0.00 0.00 0.00 3.50
3158 3218 7.276878 GCTGTTGTTATTGTTGTTGTTAGGTTT 59.723 33.333 0.00 0.00 0.00 3.27
3159 3219 9.145865 CTGTTGTTATTGTTGTTGTTAGGTTTT 57.854 29.630 0.00 0.00 0.00 2.43
3160 3220 9.490379 TGTTGTTATTGTTGTTGTTAGGTTTTT 57.510 25.926 0.00 0.00 0.00 1.94
3198 3258 9.253832 TCACCATGTTTCAAAATATATGGTTCT 57.746 29.630 14.23 0.00 44.16 3.01
3239 3299 9.803315 AAGTCAAACCTTTTAAATTCAGAGAAC 57.197 29.630 0.00 0.00 0.00 3.01
3240 3300 8.966868 AGTCAAACCTTTTAAATTCAGAGAACA 58.033 29.630 0.00 0.00 0.00 3.18
3241 3301 9.750125 GTCAAACCTTTTAAATTCAGAGAACAT 57.250 29.630 0.00 0.00 0.00 2.71
3246 3306 9.971922 ACCTTTTAAATTCAGAGAACATTCTTG 57.028 29.630 0.00 0.00 37.73 3.02
3247 3307 8.919661 CCTTTTAAATTCAGAGAACATTCTTGC 58.080 33.333 0.00 0.00 37.73 4.01
3248 3308 9.688592 CTTTTAAATTCAGAGAACATTCTTGCT 57.311 29.630 0.00 0.00 37.73 3.91
3252 3312 7.992754 AATTCAGAGAACATTCTTGCTAAGT 57.007 32.000 0.00 0.00 37.73 2.24
3253 3313 7.608308 ATTCAGAGAACATTCTTGCTAAGTC 57.392 36.000 0.00 0.00 37.73 3.01
3254 3314 6.352016 TCAGAGAACATTCTTGCTAAGTCT 57.648 37.500 0.00 0.00 37.73 3.24
3255 3315 6.393990 TCAGAGAACATTCTTGCTAAGTCTC 58.606 40.000 0.00 0.00 37.73 3.36
3256 3316 5.580297 CAGAGAACATTCTTGCTAAGTCTCC 59.420 44.000 0.00 0.00 37.73 3.71
3257 3317 4.499183 AGAACATTCTTGCTAAGTCTCCG 58.501 43.478 0.00 0.00 32.55 4.63
3258 3318 3.963428 ACATTCTTGCTAAGTCTCCGT 57.037 42.857 0.00 0.00 0.00 4.69
3259 3319 3.851098 ACATTCTTGCTAAGTCTCCGTC 58.149 45.455 0.00 0.00 0.00 4.79
3260 3320 2.631418 TTCTTGCTAAGTCTCCGTCG 57.369 50.000 0.00 0.00 0.00 5.12
3261 3321 1.817357 TCTTGCTAAGTCTCCGTCGA 58.183 50.000 0.00 0.00 0.00 4.20
3262 3322 1.467734 TCTTGCTAAGTCTCCGTCGAC 59.532 52.381 5.18 5.18 0.00 4.20
3263 3323 1.469308 CTTGCTAAGTCTCCGTCGACT 59.531 52.381 14.70 0.00 45.73 4.18
3264 3324 0.803117 TGCTAAGTCTCCGTCGACTG 59.197 55.000 14.70 7.40 43.14 3.51
3265 3325 1.085091 GCTAAGTCTCCGTCGACTGA 58.915 55.000 14.70 11.91 43.14 3.41
3266 3326 1.062880 GCTAAGTCTCCGTCGACTGAG 59.937 57.143 25.85 25.85 43.14 3.35
3267 3327 2.619147 CTAAGTCTCCGTCGACTGAGA 58.381 52.381 29.03 29.03 42.73 3.27
3269 3329 2.843669 GTCTCCGTCGACTGAGACT 58.156 57.895 40.23 0.00 46.75 3.24
3270 3330 1.158434 GTCTCCGTCGACTGAGACTT 58.842 55.000 40.23 0.00 46.75 3.01
3271 3331 1.129064 GTCTCCGTCGACTGAGACTTC 59.871 57.143 40.23 26.24 46.75 3.01
3272 3332 1.002201 TCTCCGTCGACTGAGACTTCT 59.998 52.381 29.03 0.00 38.90 2.85
3273 3333 1.807742 CTCCGTCGACTGAGACTTCTT 59.192 52.381 27.22 0.00 38.90 2.52
3274 3334 2.226912 CTCCGTCGACTGAGACTTCTTT 59.773 50.000 27.22 0.00 38.90 2.52
3275 3335 3.405831 TCCGTCGACTGAGACTTCTTTA 58.594 45.455 14.70 0.00 38.90 1.85
3276 3336 3.817084 TCCGTCGACTGAGACTTCTTTAA 59.183 43.478 14.70 0.00 38.90 1.52
3277 3337 4.083431 TCCGTCGACTGAGACTTCTTTAAG 60.083 45.833 14.70 0.00 38.90 1.85
3290 3350 5.164954 ACTTCTTTAAGTCTCAGTCGATGC 58.835 41.667 0.00 0.00 42.42 3.91
3291 3351 5.047660 ACTTCTTTAAGTCTCAGTCGATGCT 60.048 40.000 0.00 0.00 42.42 3.79
3292 3352 5.392767 TCTTTAAGTCTCAGTCGATGCTT 57.607 39.130 0.00 0.00 0.00 3.91
3293 3353 5.784177 TCTTTAAGTCTCAGTCGATGCTTT 58.216 37.500 0.00 0.00 0.00 3.51
3294 3354 6.920817 TCTTTAAGTCTCAGTCGATGCTTTA 58.079 36.000 0.00 0.00 0.00 1.85
3295 3355 7.548097 TCTTTAAGTCTCAGTCGATGCTTTAT 58.452 34.615 0.00 0.00 0.00 1.40
3296 3356 7.702772 TCTTTAAGTCTCAGTCGATGCTTTATC 59.297 37.037 0.00 0.00 0.00 1.75
3297 3357 5.590530 AAGTCTCAGTCGATGCTTTATCT 57.409 39.130 0.00 0.00 33.44 1.98
3298 3358 6.701145 AAGTCTCAGTCGATGCTTTATCTA 57.299 37.500 0.00 0.00 33.44 1.98
3299 3359 6.892658 AGTCTCAGTCGATGCTTTATCTAT 57.107 37.500 0.00 0.00 33.44 1.98
3300 3360 6.676950 AGTCTCAGTCGATGCTTTATCTATG 58.323 40.000 0.00 0.00 33.44 2.23
3301 3361 6.488344 AGTCTCAGTCGATGCTTTATCTATGA 59.512 38.462 0.00 0.00 33.44 2.15
3302 3362 6.801377 GTCTCAGTCGATGCTTTATCTATGAG 59.199 42.308 0.00 0.00 37.94 2.90
3303 3363 6.712547 TCTCAGTCGATGCTTTATCTATGAGA 59.287 38.462 0.00 0.00 40.31 3.27
3304 3364 7.392953 TCTCAGTCGATGCTTTATCTATGAGAT 59.607 37.037 0.00 0.00 39.15 2.75
3305 3365 7.534282 TCAGTCGATGCTTTATCTATGAGATC 58.466 38.462 0.00 0.00 36.20 2.75
3306 3366 7.175641 TCAGTCGATGCTTTATCTATGAGATCA 59.824 37.037 0.00 0.00 36.20 2.92
3307 3367 7.975058 CAGTCGATGCTTTATCTATGAGATCAT 59.025 37.037 0.31 0.31 36.20 2.45
3308 3368 9.183368 AGTCGATGCTTTATCTATGAGATCATA 57.817 33.333 0.00 2.71 36.20 2.15
3309 3369 9.964303 GTCGATGCTTTATCTATGAGATCATAT 57.036 33.333 3.11 0.00 38.09 1.78
3321 3381 9.859152 TCTATGAGATCATATATTGAGATCCGT 57.141 33.333 3.11 4.93 39.10 4.69
3322 3382 9.896263 CTATGAGATCATATATTGAGATCCGTG 57.104 37.037 3.11 0.00 39.10 4.94
3323 3383 6.567959 TGAGATCATATATTGAGATCCGTGC 58.432 40.000 7.56 0.00 39.10 5.34
3324 3384 6.153340 TGAGATCATATATTGAGATCCGTGCA 59.847 38.462 7.56 0.00 39.10 4.57
3325 3385 6.939622 AGATCATATATTGAGATCCGTGCAA 58.060 36.000 7.56 0.00 39.10 4.08
3326 3386 7.389232 AGATCATATATTGAGATCCGTGCAAA 58.611 34.615 7.56 0.00 39.10 3.68
3327 3387 7.548427 AGATCATATATTGAGATCCGTGCAAAG 59.452 37.037 7.56 0.00 39.10 2.77
3328 3388 6.524734 TCATATATTGAGATCCGTGCAAAGT 58.475 36.000 0.00 0.00 0.00 2.66
3329 3389 6.992123 TCATATATTGAGATCCGTGCAAAGTT 59.008 34.615 0.00 0.00 0.00 2.66
3330 3390 8.147704 TCATATATTGAGATCCGTGCAAAGTTA 58.852 33.333 0.00 0.00 0.00 2.24
3331 3391 8.939929 CATATATTGAGATCCGTGCAAAGTTAT 58.060 33.333 0.00 0.00 0.00 1.89
3332 3392 4.944962 TTGAGATCCGTGCAAAGTTATG 57.055 40.909 0.00 0.00 0.00 1.90
3333 3393 3.937814 TGAGATCCGTGCAAAGTTATGT 58.062 40.909 0.00 0.00 0.00 2.29
3334 3394 3.932710 TGAGATCCGTGCAAAGTTATGTC 59.067 43.478 0.00 0.00 0.00 3.06
3335 3395 3.932710 GAGATCCGTGCAAAGTTATGTCA 59.067 43.478 0.00 0.00 0.00 3.58
3336 3396 4.517285 AGATCCGTGCAAAGTTATGTCAT 58.483 39.130 0.00 0.00 0.00 3.06
3337 3397 4.943705 AGATCCGTGCAAAGTTATGTCATT 59.056 37.500 0.00 0.00 0.00 2.57
3338 3398 5.415701 AGATCCGTGCAAAGTTATGTCATTT 59.584 36.000 0.00 0.00 0.00 2.32
3339 3399 4.793071 TCCGTGCAAAGTTATGTCATTTG 58.207 39.130 0.00 0.00 37.07 2.32
3340 3400 3.919804 CCGTGCAAAGTTATGTCATTTGG 59.080 43.478 0.00 0.00 35.07 3.28
3341 3401 3.364621 CGTGCAAAGTTATGTCATTTGGC 59.635 43.478 0.00 0.00 35.07 4.52
3342 3402 4.559153 GTGCAAAGTTATGTCATTTGGCT 58.441 39.130 0.00 0.00 35.07 4.75
3343 3403 4.386652 GTGCAAAGTTATGTCATTTGGCTG 59.613 41.667 0.00 0.00 35.07 4.85
3344 3404 4.280425 TGCAAAGTTATGTCATTTGGCTGA 59.720 37.500 0.00 0.00 35.07 4.26
3345 3405 4.860907 GCAAAGTTATGTCATTTGGCTGAG 59.139 41.667 0.00 0.00 35.07 3.35
3346 3406 5.335897 GCAAAGTTATGTCATTTGGCTGAGA 60.336 40.000 0.00 0.00 35.07 3.27
3347 3407 5.886960 AAGTTATGTCATTTGGCTGAGAC 57.113 39.130 0.00 0.00 0.00 3.36
3348 3408 5.171339 AGTTATGTCATTTGGCTGAGACT 57.829 39.130 0.00 0.00 32.41 3.24
3349 3409 5.564550 AGTTATGTCATTTGGCTGAGACTT 58.435 37.500 0.00 0.00 32.41 3.01
3350 3410 5.413833 AGTTATGTCATTTGGCTGAGACTTG 59.586 40.000 0.00 0.00 32.41 3.16
3351 3411 2.507484 TGTCATTTGGCTGAGACTTGG 58.493 47.619 0.00 0.00 32.41 3.61
3352 3412 2.158623 TGTCATTTGGCTGAGACTTGGT 60.159 45.455 0.00 0.00 32.41 3.67
3353 3413 2.887152 GTCATTTGGCTGAGACTTGGTT 59.113 45.455 0.00 0.00 0.00 3.67
3354 3414 4.072131 GTCATTTGGCTGAGACTTGGTTA 58.928 43.478 0.00 0.00 0.00 2.85
3355 3415 4.518970 GTCATTTGGCTGAGACTTGGTTAA 59.481 41.667 0.00 0.00 0.00 2.01
3356 3416 5.009610 GTCATTTGGCTGAGACTTGGTTAAA 59.990 40.000 0.00 0.00 0.00 1.52
3357 3417 5.774690 TCATTTGGCTGAGACTTGGTTAAAT 59.225 36.000 0.00 0.00 0.00 1.40
3358 3418 5.705609 TTTGGCTGAGACTTGGTTAAATC 57.294 39.130 0.00 0.00 0.00 2.17
3359 3419 4.640771 TGGCTGAGACTTGGTTAAATCT 57.359 40.909 0.00 0.00 0.00 2.40
3360 3420 4.579869 TGGCTGAGACTTGGTTAAATCTC 58.420 43.478 0.00 0.00 38.46 2.75
3361 3421 4.041567 TGGCTGAGACTTGGTTAAATCTCA 59.958 41.667 3.03 3.03 44.05 3.27
3365 3425 6.419484 TGAGACTTGGTTAAATCTCAGTCA 57.581 37.500 0.00 0.00 41.99 3.41
3366 3426 6.826668 TGAGACTTGGTTAAATCTCAGTCAA 58.173 36.000 0.00 0.00 41.99 3.18
3367 3427 6.706270 TGAGACTTGGTTAAATCTCAGTCAAC 59.294 38.462 0.00 0.00 41.99 3.18
3368 3428 6.831976 AGACTTGGTTAAATCTCAGTCAACT 58.168 36.000 0.00 0.00 0.00 3.16
3369 3429 6.708054 AGACTTGGTTAAATCTCAGTCAACTG 59.292 38.462 3.69 3.69 45.08 3.16
3380 3440 3.599730 CAGTCAACTGAGATGTAGCCA 57.400 47.619 4.05 0.00 46.59 4.75
3381 3441 4.134379 CAGTCAACTGAGATGTAGCCAT 57.866 45.455 4.05 0.00 46.59 4.40
3382 3442 5.268118 CAGTCAACTGAGATGTAGCCATA 57.732 43.478 4.05 0.00 46.59 2.74
3383 3443 5.046529 CAGTCAACTGAGATGTAGCCATAC 58.953 45.833 4.05 0.00 46.59 2.39
3384 3444 4.100189 AGTCAACTGAGATGTAGCCATACC 59.900 45.833 0.00 0.00 0.00 2.73
3385 3445 3.388024 TCAACTGAGATGTAGCCATACCC 59.612 47.826 0.00 0.00 0.00 3.69
3386 3446 3.336509 ACTGAGATGTAGCCATACCCT 57.663 47.619 0.00 0.00 0.00 4.34
3387 3447 3.658725 ACTGAGATGTAGCCATACCCTT 58.341 45.455 0.00 0.00 0.00 3.95
3388 3448 3.643792 ACTGAGATGTAGCCATACCCTTC 59.356 47.826 0.00 0.00 0.00 3.46
3389 3449 3.643320 CTGAGATGTAGCCATACCCTTCA 59.357 47.826 0.00 0.00 0.00 3.02
3390 3450 3.643320 TGAGATGTAGCCATACCCTTCAG 59.357 47.826 0.00 0.00 0.00 3.02
3391 3451 3.898123 GAGATGTAGCCATACCCTTCAGA 59.102 47.826 0.00 0.00 0.00 3.27
3392 3452 3.900601 AGATGTAGCCATACCCTTCAGAG 59.099 47.826 0.00 0.00 0.00 3.35
3393 3453 3.398318 TGTAGCCATACCCTTCAGAGA 57.602 47.619 0.00 0.00 0.00 3.10
3394 3454 3.719871 TGTAGCCATACCCTTCAGAGAA 58.280 45.455 0.00 0.00 0.00 2.87
3395 3455 4.101114 TGTAGCCATACCCTTCAGAGAAA 58.899 43.478 0.00 0.00 0.00 2.52
3396 3456 4.721776 TGTAGCCATACCCTTCAGAGAAAT 59.278 41.667 0.00 0.00 0.00 2.17
3397 3457 5.903010 TGTAGCCATACCCTTCAGAGAAATA 59.097 40.000 0.00 0.00 0.00 1.40
3398 3458 6.558775 TGTAGCCATACCCTTCAGAGAAATAT 59.441 38.462 0.00 0.00 0.00 1.28
3399 3459 7.733047 TGTAGCCATACCCTTCAGAGAAATATA 59.267 37.037 0.00 0.00 0.00 0.86
3400 3460 7.821134 AGCCATACCCTTCAGAGAAATATAT 57.179 36.000 0.00 0.00 0.00 0.86
3401 3461 7.856415 AGCCATACCCTTCAGAGAAATATATC 58.144 38.462 0.00 0.00 0.00 1.63
3402 3462 7.459125 AGCCATACCCTTCAGAGAAATATATCA 59.541 37.037 0.00 0.00 0.00 2.15
3403 3463 8.103305 GCCATACCCTTCAGAGAAATATATCAA 58.897 37.037 0.00 0.00 0.00 2.57
3490 3550 4.882671 ACTGTGGATGTCGATATTTTGC 57.117 40.909 0.00 0.00 0.00 3.68
3491 3551 4.517285 ACTGTGGATGTCGATATTTTGCT 58.483 39.130 0.00 0.00 0.00 3.91
3492 3552 4.572389 ACTGTGGATGTCGATATTTTGCTC 59.428 41.667 0.00 0.00 0.00 4.26
3493 3553 4.769688 TGTGGATGTCGATATTTTGCTCT 58.230 39.130 0.00 0.00 0.00 4.09
3494 3554 4.571984 TGTGGATGTCGATATTTTGCTCTG 59.428 41.667 0.00 0.00 0.00 3.35
3495 3555 4.811024 GTGGATGTCGATATTTTGCTCTGA 59.189 41.667 0.00 0.00 0.00 3.27
3496 3556 5.050499 GTGGATGTCGATATTTTGCTCTGAG 60.050 44.000 0.00 0.00 0.00 3.35
3497 3557 4.084118 GGATGTCGATATTTTGCTCTGAGC 60.084 45.833 22.38 22.38 42.82 4.26
3498 3558 4.128925 TGTCGATATTTTGCTCTGAGCT 57.871 40.909 28.04 12.24 42.97 4.09
3499 3559 4.507710 TGTCGATATTTTGCTCTGAGCTT 58.492 39.130 28.04 13.89 42.97 3.74
3500 3560 4.330894 TGTCGATATTTTGCTCTGAGCTTG 59.669 41.667 28.04 12.27 42.97 4.01
3501 3561 3.873361 TCGATATTTTGCTCTGAGCTTGG 59.127 43.478 28.04 10.40 42.97 3.61
3502 3562 3.624861 CGATATTTTGCTCTGAGCTTGGT 59.375 43.478 28.04 15.10 42.97 3.67
3503 3563 4.260538 CGATATTTTGCTCTGAGCTTGGTC 60.261 45.833 28.04 16.98 42.97 4.02
3504 3564 2.346766 TTTTGCTCTGAGCTTGGTCA 57.653 45.000 28.04 6.12 42.97 4.02
3505 3565 2.346766 TTTGCTCTGAGCTTGGTCAA 57.653 45.000 28.04 11.88 42.97 3.18
3506 3566 2.346766 TTGCTCTGAGCTTGGTCAAA 57.653 45.000 28.04 11.19 42.97 2.69
3507 3567 1.888215 TGCTCTGAGCTTGGTCAAAG 58.112 50.000 28.04 1.69 42.97 2.77
3508 3568 1.141657 TGCTCTGAGCTTGGTCAAAGT 59.858 47.619 28.04 0.00 42.97 2.66
3509 3569 2.368548 TGCTCTGAGCTTGGTCAAAGTA 59.631 45.455 28.04 2.63 42.97 2.24
3510 3570 2.999355 GCTCTGAGCTTGGTCAAAGTAG 59.001 50.000 21.93 2.39 38.45 2.57
3511 3571 3.306364 GCTCTGAGCTTGGTCAAAGTAGA 60.306 47.826 21.93 0.00 38.45 2.59
3512 3572 4.800914 GCTCTGAGCTTGGTCAAAGTAGAA 60.801 45.833 21.93 0.00 38.45 2.10
3513 3573 4.887748 TCTGAGCTTGGTCAAAGTAGAAG 58.112 43.478 4.09 0.00 38.25 2.85
3514 3574 4.588951 TCTGAGCTTGGTCAAAGTAGAAGA 59.411 41.667 4.09 0.00 38.25 2.87
3515 3575 5.070446 TCTGAGCTTGGTCAAAGTAGAAGAA 59.930 40.000 4.09 0.00 38.25 2.52
3516 3576 5.680619 TGAGCTTGGTCAAAGTAGAAGAAA 58.319 37.500 0.00 0.00 38.25 2.52
3517 3577 6.299141 TGAGCTTGGTCAAAGTAGAAGAAAT 58.701 36.000 0.00 0.00 38.25 2.17
3518 3578 6.772716 TGAGCTTGGTCAAAGTAGAAGAAATT 59.227 34.615 0.00 0.00 38.25 1.82
3519 3579 7.285401 TGAGCTTGGTCAAAGTAGAAGAAATTT 59.715 33.333 0.00 0.00 38.25 1.82
3520 3580 7.428826 AGCTTGGTCAAAGTAGAAGAAATTTG 58.571 34.615 0.00 0.00 38.25 2.32
3521 3581 7.285401 AGCTTGGTCAAAGTAGAAGAAATTTGA 59.715 33.333 0.00 0.00 38.85 2.69
3522 3582 8.084684 GCTTGGTCAAAGTAGAAGAAATTTGAT 58.915 33.333 0.00 0.00 41.97 2.57
3523 3583 9.971922 CTTGGTCAAAGTAGAAGAAATTTGATT 57.028 29.630 0.00 0.00 41.97 2.57
3578 3638 8.772705 TGAAATTGATGAAATGTTTAGTTTGGC 58.227 29.630 0.00 0.00 0.00 4.52
3579 3639 6.949578 ATTGATGAAATGTTTAGTTTGGCG 57.050 33.333 0.00 0.00 0.00 5.69
3580 3640 4.804108 TGATGAAATGTTTAGTTTGGCGG 58.196 39.130 0.00 0.00 0.00 6.13
3581 3641 3.651803 TGAAATGTTTAGTTTGGCGGG 57.348 42.857 0.00 0.00 0.00 6.13
3582 3642 2.959707 TGAAATGTTTAGTTTGGCGGGT 59.040 40.909 0.00 0.00 0.00 5.28
3583 3643 3.243569 TGAAATGTTTAGTTTGGCGGGTG 60.244 43.478 0.00 0.00 0.00 4.61
3584 3644 1.253100 ATGTTTAGTTTGGCGGGTGG 58.747 50.000 0.00 0.00 0.00 4.61
3585 3645 0.106619 TGTTTAGTTTGGCGGGTGGT 60.107 50.000 0.00 0.00 0.00 4.16
3586 3646 0.312729 GTTTAGTTTGGCGGGTGGTG 59.687 55.000 0.00 0.00 0.00 4.17
3587 3647 0.824182 TTTAGTTTGGCGGGTGGTGG 60.824 55.000 0.00 0.00 0.00 4.61
3588 3648 1.706995 TTAGTTTGGCGGGTGGTGGA 61.707 55.000 0.00 0.00 0.00 4.02
3589 3649 2.119484 TAGTTTGGCGGGTGGTGGAG 62.119 60.000 0.00 0.00 0.00 3.86
3590 3650 3.172106 TTTGGCGGGTGGTGGAGA 61.172 61.111 0.00 0.00 0.00 3.71
3591 3651 2.534396 TTTGGCGGGTGGTGGAGAT 61.534 57.895 0.00 0.00 0.00 2.75
3592 3652 2.762969 TTTGGCGGGTGGTGGAGATG 62.763 60.000 0.00 0.00 0.00 2.90
3593 3653 3.399181 GGCGGGTGGTGGAGATGA 61.399 66.667 0.00 0.00 0.00 2.92
3594 3654 2.746375 GGCGGGTGGTGGAGATGAT 61.746 63.158 0.00 0.00 0.00 2.45
3595 3655 1.407656 GGCGGGTGGTGGAGATGATA 61.408 60.000 0.00 0.00 0.00 2.15
3596 3656 0.687354 GCGGGTGGTGGAGATGATAT 59.313 55.000 0.00 0.00 0.00 1.63
3597 3657 1.899814 GCGGGTGGTGGAGATGATATA 59.100 52.381 0.00 0.00 0.00 0.86
3598 3658 2.093973 GCGGGTGGTGGAGATGATATAG 60.094 54.545 0.00 0.00 0.00 1.31
3599 3659 3.165875 CGGGTGGTGGAGATGATATAGT 58.834 50.000 0.00 0.00 0.00 2.12
3600 3660 3.056536 CGGGTGGTGGAGATGATATAGTG 60.057 52.174 0.00 0.00 0.00 2.74
3601 3661 3.307059 GGGTGGTGGAGATGATATAGTGC 60.307 52.174 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.521937 TCCCTCCATTCGGAATTACTTGT 59.478 43.478 0.00 0.00 42.21 3.16
1 2 4.130118 CTCCCTCCATTCGGAATTACTTG 58.870 47.826 0.00 0.00 42.21 3.16
2 3 3.780850 ACTCCCTCCATTCGGAATTACTT 59.219 43.478 0.00 0.00 42.21 2.24
3 4 3.385115 ACTCCCTCCATTCGGAATTACT 58.615 45.455 0.00 0.00 42.21 2.24
4 5 3.840124 ACTCCCTCCATTCGGAATTAC 57.160 47.619 0.00 0.00 42.21 1.89
5 6 4.262894 GCATACTCCCTCCATTCGGAATTA 60.263 45.833 0.00 0.00 42.21 1.40
6 7 3.496870 GCATACTCCCTCCATTCGGAATT 60.497 47.826 0.00 0.00 42.21 2.17
7 8 2.039084 GCATACTCCCTCCATTCGGAAT 59.961 50.000 0.00 0.00 42.21 3.01
8 9 1.416401 GCATACTCCCTCCATTCGGAA 59.584 52.381 0.00 0.00 42.21 4.30
9 10 1.048601 GCATACTCCCTCCATTCGGA 58.951 55.000 0.00 0.00 39.79 4.55
10 11 0.758734 TGCATACTCCCTCCATTCGG 59.241 55.000 0.00 0.00 0.00 4.30
11 12 2.847327 ATGCATACTCCCTCCATTCG 57.153 50.000 0.00 0.00 0.00 3.34
12 13 3.997021 CGTAATGCATACTCCCTCCATTC 59.003 47.826 0.00 0.00 31.96 2.67
13 14 3.244561 CCGTAATGCATACTCCCTCCATT 60.245 47.826 0.00 0.00 31.96 3.16
14 15 2.303022 CCGTAATGCATACTCCCTCCAT 59.697 50.000 0.00 0.00 31.96 3.41
15 16 1.691976 CCGTAATGCATACTCCCTCCA 59.308 52.381 0.00 0.00 31.96 3.86
16 17 1.968493 TCCGTAATGCATACTCCCTCC 59.032 52.381 0.00 0.00 31.96 4.30
17 18 2.028930 CCTCCGTAATGCATACTCCCTC 60.029 54.545 0.00 0.00 31.96 4.30
18 19 1.971357 CCTCCGTAATGCATACTCCCT 59.029 52.381 0.00 0.00 31.96 4.20
19 20 1.002087 CCCTCCGTAATGCATACTCCC 59.998 57.143 0.00 0.00 31.96 4.30
20 21 1.692519 ACCCTCCGTAATGCATACTCC 59.307 52.381 0.00 0.00 31.96 3.85
21 22 2.102588 ACACCCTCCGTAATGCATACTC 59.897 50.000 0.00 0.00 31.96 2.59
22 23 2.116238 ACACCCTCCGTAATGCATACT 58.884 47.619 0.00 0.00 31.96 2.12
23 24 2.614829 ACACCCTCCGTAATGCATAC 57.385 50.000 0.00 0.00 0.00 2.39
24 25 3.898741 TGATACACCCTCCGTAATGCATA 59.101 43.478 0.00 0.00 0.00 3.14
25 26 2.703536 TGATACACCCTCCGTAATGCAT 59.296 45.455 0.00 0.00 0.00 3.96
26 27 2.112190 TGATACACCCTCCGTAATGCA 58.888 47.619 0.00 0.00 0.00 3.96
27 28 2.902705 TGATACACCCTCCGTAATGC 57.097 50.000 0.00 0.00 0.00 3.56
28 29 4.058124 CACATGATACACCCTCCGTAATG 58.942 47.826 0.00 0.00 0.00 1.90
29 30 3.494398 GCACATGATACACCCTCCGTAAT 60.494 47.826 0.00 0.00 0.00 1.89
30 31 2.159014 GCACATGATACACCCTCCGTAA 60.159 50.000 0.00 0.00 0.00 3.18
31 32 1.411246 GCACATGATACACCCTCCGTA 59.589 52.381 0.00 0.00 0.00 4.02
32 33 0.178068 GCACATGATACACCCTCCGT 59.822 55.000 0.00 0.00 0.00 4.69
33 34 0.177836 TGCACATGATACACCCTCCG 59.822 55.000 0.00 0.00 0.00 4.63
34 35 2.158769 TCATGCACATGATACACCCTCC 60.159 50.000 9.23 0.00 42.42 4.30
35 36 3.198409 TCATGCACATGATACACCCTC 57.802 47.619 9.23 0.00 42.42 4.30
61 62 9.857656 CTGCCCATAATGGATAGTATCATATTT 57.142 33.333 12.19 2.78 40.96 1.40
62 63 9.007494 ACTGCCCATAATGGATAGTATCATATT 57.993 33.333 12.19 12.84 40.96 1.28
63 64 8.572884 ACTGCCCATAATGGATAGTATCATAT 57.427 34.615 12.19 3.33 40.96 1.78
64 65 7.623278 TGACTGCCCATAATGGATAGTATCATA 59.377 37.037 12.19 1.05 40.96 2.15
65 66 6.444816 TGACTGCCCATAATGGATAGTATCAT 59.555 38.462 12.19 1.61 40.96 2.45
66 67 5.784906 TGACTGCCCATAATGGATAGTATCA 59.215 40.000 12.19 0.00 40.96 2.15
67 68 6.299805 TGACTGCCCATAATGGATAGTATC 57.700 41.667 1.11 1.11 40.96 2.24
68 69 6.501805 TCTTGACTGCCCATAATGGATAGTAT 59.498 38.462 0.00 0.00 40.96 2.12
69 70 5.843969 TCTTGACTGCCCATAATGGATAGTA 59.156 40.000 0.00 0.00 40.96 1.82
70 71 4.660303 TCTTGACTGCCCATAATGGATAGT 59.340 41.667 0.00 0.00 40.96 2.12
71 72 5.233083 TCTTGACTGCCCATAATGGATAG 57.767 43.478 0.00 0.00 40.96 2.08
72 73 5.549228 AGATCTTGACTGCCCATAATGGATA 59.451 40.000 0.00 0.00 40.96 2.59
73 74 4.353191 AGATCTTGACTGCCCATAATGGAT 59.647 41.667 0.00 0.00 40.96 3.41
74 75 3.718434 AGATCTTGACTGCCCATAATGGA 59.282 43.478 0.00 0.00 40.96 3.41
75 76 4.096190 AGATCTTGACTGCCCATAATGG 57.904 45.455 0.00 0.00 37.25 3.16
76 77 4.687948 CGTAGATCTTGACTGCCCATAATG 59.312 45.833 0.00 0.00 0.00 1.90
77 78 4.262635 CCGTAGATCTTGACTGCCCATAAT 60.263 45.833 0.00 0.00 0.00 1.28
78 79 3.069586 CCGTAGATCTTGACTGCCCATAA 59.930 47.826 0.00 0.00 0.00 1.90
79 80 2.628178 CCGTAGATCTTGACTGCCCATA 59.372 50.000 0.00 0.00 0.00 2.74
80 81 1.414181 CCGTAGATCTTGACTGCCCAT 59.586 52.381 0.00 0.00 0.00 4.00
81 82 0.824109 CCGTAGATCTTGACTGCCCA 59.176 55.000 0.00 0.00 0.00 5.36
82 83 1.112113 TCCGTAGATCTTGACTGCCC 58.888 55.000 0.00 0.00 0.00 5.36
83 84 4.792521 ATATCCGTAGATCTTGACTGCC 57.207 45.455 0.00 0.00 33.67 4.85
84 85 8.589335 TTAAAATATCCGTAGATCTTGACTGC 57.411 34.615 0.00 0.00 33.67 4.40
102 103 9.780186 ACCCGTGGATTTTGAAAAATTAAAATA 57.220 25.926 2.71 0.00 38.64 1.40
103 104 8.684386 ACCCGTGGATTTTGAAAAATTAAAAT 57.316 26.923 2.71 0.00 38.64 1.82
104 105 9.780186 ATACCCGTGGATTTTGAAAAATTAAAA 57.220 25.926 2.71 0.00 38.64 1.52
105 106 9.780186 AATACCCGTGGATTTTGAAAAATTAAA 57.220 25.926 2.71 0.00 38.64 1.52
106 107 9.780186 AAATACCCGTGGATTTTGAAAAATTAA 57.220 25.926 2.71 0.00 38.64 1.40
107 108 9.780186 AAAATACCCGTGGATTTTGAAAAATTA 57.220 25.926 0.00 0.00 38.64 1.40
108 109 8.684386 AAAATACCCGTGGATTTTGAAAAATT 57.316 26.923 0.00 0.00 38.64 1.82
109 110 9.780186 TTAAAATACCCGTGGATTTTGAAAAAT 57.220 25.926 10.67 0.68 41.06 1.82
110 111 9.780186 ATTAAAATACCCGTGGATTTTGAAAAA 57.220 25.926 10.67 0.00 36.27 1.94
111 112 9.780186 AATTAAAATACCCGTGGATTTTGAAAA 57.220 25.926 10.67 0.00 36.27 2.29
112 113 9.780186 AAATTAAAATACCCGTGGATTTTGAAA 57.220 25.926 10.67 0.00 36.27 2.69
113 114 9.780186 AAAATTAAAATACCCGTGGATTTTGAA 57.220 25.926 10.67 2.90 36.27 2.69
114 115 9.780186 AAAAATTAAAATACCCGTGGATTTTGA 57.220 25.926 10.67 3.36 36.27 2.69
116 117 9.780186 TGAAAAATTAAAATACCCGTGGATTTT 57.220 25.926 6.09 6.09 38.48 1.82
117 118 9.952030 ATGAAAAATTAAAATACCCGTGGATTT 57.048 25.926 0.00 0.00 0.00 2.17
118 119 9.377312 CATGAAAAATTAAAATACCCGTGGATT 57.623 29.630 0.00 0.00 0.00 3.01
119 120 7.494298 GCATGAAAAATTAAAATACCCGTGGAT 59.506 33.333 0.00 0.00 0.00 3.41
120 121 6.814146 GCATGAAAAATTAAAATACCCGTGGA 59.186 34.615 0.00 0.00 0.00 4.02
121 122 6.036626 GGCATGAAAAATTAAAATACCCGTGG 59.963 38.462 0.00 0.00 0.00 4.94
122 123 6.036626 GGGCATGAAAAATTAAAATACCCGTG 59.963 38.462 0.00 0.00 0.00 4.94
123 124 6.070481 AGGGCATGAAAAATTAAAATACCCGT 60.070 34.615 0.00 0.00 37.53 5.28
124 125 6.345298 AGGGCATGAAAAATTAAAATACCCG 58.655 36.000 0.00 0.00 37.53 5.28
125 126 9.845740 ATAAGGGCATGAAAAATTAAAATACCC 57.154 29.630 0.00 0.00 0.00 3.69
134 135 8.260114 CCTGTTAAGATAAGGGCATGAAAAATT 58.740 33.333 0.00 0.00 0.00 1.82
135 136 7.400052 ACCTGTTAAGATAAGGGCATGAAAAAT 59.600 33.333 0.00 0.00 35.24 1.82
136 137 6.723977 ACCTGTTAAGATAAGGGCATGAAAAA 59.276 34.615 0.00 0.00 35.24 1.94
137 138 6.252995 ACCTGTTAAGATAAGGGCATGAAAA 58.747 36.000 0.00 0.00 35.24 2.29
138 139 5.826643 ACCTGTTAAGATAAGGGCATGAAA 58.173 37.500 0.00 0.00 35.24 2.69
139 140 5.450818 ACCTGTTAAGATAAGGGCATGAA 57.549 39.130 0.00 0.00 35.24 2.57
140 141 5.450818 AACCTGTTAAGATAAGGGCATGA 57.549 39.130 0.00 0.00 35.24 3.07
141 142 6.601613 TGTTAACCTGTTAAGATAAGGGCATG 59.398 38.462 2.48 0.00 35.90 4.06
142 143 6.727394 TGTTAACCTGTTAAGATAAGGGCAT 58.273 36.000 2.48 0.00 35.90 4.40
143 144 6.129414 TGTTAACCTGTTAAGATAAGGGCA 57.871 37.500 2.48 0.00 35.90 5.36
144 145 5.589050 CCTGTTAACCTGTTAAGATAAGGGC 59.411 44.000 2.48 0.00 35.90 5.19
145 146 6.120220 CCCTGTTAACCTGTTAAGATAAGGG 58.880 44.000 17.02 17.02 36.93 3.95
146 147 6.718294 ACCCTGTTAACCTGTTAAGATAAGG 58.282 40.000 2.48 7.80 35.90 2.69
147 148 8.631480 AAACCCTGTTAACCTGTTAAGATAAG 57.369 34.615 2.48 0.52 35.90 1.73
148 149 8.999905 AAAACCCTGTTAACCTGTTAAGATAA 57.000 30.769 2.48 0.00 35.90 1.75
149 150 8.999905 AAAAACCCTGTTAACCTGTTAAGATA 57.000 30.769 2.48 0.00 35.90 1.98
150 151 7.907841 AAAAACCCTGTTAACCTGTTAAGAT 57.092 32.000 2.48 0.00 35.90 2.40
151 152 7.285172 GGTAAAAACCCTGTTAACCTGTTAAGA 59.715 37.037 2.48 1.59 35.90 2.10
152 153 7.428020 GGTAAAAACCCTGTTAACCTGTTAAG 58.572 38.462 2.48 0.00 35.90 1.85
153 154 6.323482 GGGTAAAAACCCTGTTAACCTGTTAA 59.677 38.462 6.34 0.00 46.39 2.01
154 155 5.832595 GGGTAAAAACCCTGTTAACCTGTTA 59.167 40.000 6.34 0.00 46.39 2.41
155 156 4.650588 GGGTAAAAACCCTGTTAACCTGTT 59.349 41.667 6.34 1.15 46.39 3.16
156 157 4.217510 GGGTAAAAACCCTGTTAACCTGT 58.782 43.478 6.34 0.00 46.39 4.00
157 158 4.859304 GGGTAAAAACCCTGTTAACCTG 57.141 45.455 6.34 0.00 46.39 4.00
167 168 1.475280 GAATCCAGCGGGTAAAAACCC 59.525 52.381 1.81 3.34 46.43 4.11
168 169 1.131693 CGAATCCAGCGGGTAAAAACC 59.868 52.381 1.81 0.00 34.93 3.27
169 170 1.808343 ACGAATCCAGCGGGTAAAAAC 59.192 47.619 1.81 0.00 34.93 2.43
170 171 1.807742 CACGAATCCAGCGGGTAAAAA 59.192 47.619 1.81 0.00 34.93 1.94
171 172 1.444836 CACGAATCCAGCGGGTAAAA 58.555 50.000 1.81 0.00 34.93 1.52
172 173 0.391927 CCACGAATCCAGCGGGTAAA 60.392 55.000 1.81 0.00 34.93 2.01
173 174 1.219664 CCACGAATCCAGCGGGTAA 59.780 57.895 1.81 0.00 34.93 2.85
174 175 2.727392 CCCACGAATCCAGCGGGTA 61.727 63.158 1.81 0.00 34.93 3.69
175 176 4.096003 CCCACGAATCCAGCGGGT 62.096 66.667 1.81 0.00 34.93 5.28
176 177 2.727392 TACCCACGAATCCAGCGGG 61.727 63.158 0.00 0.00 43.02 6.13
177 178 1.520787 GTACCCACGAATCCAGCGG 60.521 63.158 0.00 0.00 0.00 5.52
178 179 1.520787 GGTACCCACGAATCCAGCG 60.521 63.158 0.00 0.00 0.00 5.18
179 180 1.520787 CGGTACCCACGAATCCAGC 60.521 63.158 6.25 0.00 0.00 4.85
180 181 1.143183 CCGGTACCCACGAATCCAG 59.857 63.158 6.25 0.00 0.00 3.86
181 182 2.360767 CCCGGTACCCACGAATCCA 61.361 63.158 6.25 0.00 0.00 3.41
182 183 2.059786 TCCCGGTACCCACGAATCC 61.060 63.158 6.25 0.00 0.00 3.01
183 184 1.142531 GTCCCGGTACCCACGAATC 59.857 63.158 6.25 0.00 0.00 2.52
184 185 2.713967 CGTCCCGGTACCCACGAAT 61.714 63.158 16.96 0.00 34.06 3.34
185 186 3.372730 CGTCCCGGTACCCACGAA 61.373 66.667 16.96 0.00 34.06 3.85
197 198 1.174078 GCTAGTCTCTAGGGCGTCCC 61.174 65.000 0.08 4.26 45.90 4.46
198 199 1.508808 CGCTAGTCTCTAGGGCGTCC 61.509 65.000 0.00 0.00 40.78 4.79
199 200 0.532417 TCGCTAGTCTCTAGGGCGTC 60.532 60.000 13.52 0.00 45.01 5.19
200 201 0.107312 TTCGCTAGTCTCTAGGGCGT 60.107 55.000 13.52 0.00 45.01 5.68
201 202 1.022735 TTTCGCTAGTCTCTAGGGCG 58.977 55.000 13.52 9.13 45.93 6.13
202 203 1.067364 GGTTTCGCTAGTCTCTAGGGC 59.933 57.143 13.52 3.44 0.00 5.19
203 204 1.682323 GGGTTTCGCTAGTCTCTAGGG 59.318 57.143 12.53 12.53 0.00 3.53
204 205 2.657143 AGGGTTTCGCTAGTCTCTAGG 58.343 52.381 6.03 0.00 0.00 3.02
205 206 3.695060 TCAAGGGTTTCGCTAGTCTCTAG 59.305 47.826 0.00 0.03 0.00 2.43
206 207 3.693807 TCAAGGGTTTCGCTAGTCTCTA 58.306 45.455 0.00 0.00 0.00 2.43
207 208 2.526432 TCAAGGGTTTCGCTAGTCTCT 58.474 47.619 0.00 0.00 0.00 3.10
208 209 2.994578 GTTCAAGGGTTTCGCTAGTCTC 59.005 50.000 0.00 0.00 0.00 3.36
209 210 2.609737 CGTTCAAGGGTTTCGCTAGTCT 60.610 50.000 0.00 0.00 0.00 3.24
210 211 1.725164 CGTTCAAGGGTTTCGCTAGTC 59.275 52.381 0.00 0.00 0.00 2.59
211 212 1.607251 CCGTTCAAGGGTTTCGCTAGT 60.607 52.381 0.00 0.00 0.00 2.57
212 213 1.076332 CCGTTCAAGGGTTTCGCTAG 58.924 55.000 0.00 0.00 0.00 3.42
213 214 0.680618 TCCGTTCAAGGGTTTCGCTA 59.319 50.000 0.00 0.00 0.00 4.26
214 215 0.036306 ATCCGTTCAAGGGTTTCGCT 59.964 50.000 0.00 0.00 0.00 4.93
215 216 0.168128 CATCCGTTCAAGGGTTTCGC 59.832 55.000 0.00 0.00 0.00 4.70
216 217 1.803334 TCATCCGTTCAAGGGTTTCG 58.197 50.000 0.00 0.00 0.00 3.46
217 218 2.882137 TGTTCATCCGTTCAAGGGTTTC 59.118 45.455 0.00 0.00 0.00 2.78
218 219 2.938838 TGTTCATCCGTTCAAGGGTTT 58.061 42.857 0.00 0.00 0.00 3.27
219 220 2.649531 TGTTCATCCGTTCAAGGGTT 57.350 45.000 0.00 0.00 0.00 4.11
220 221 2.649531 TTGTTCATCCGTTCAAGGGT 57.350 45.000 0.00 0.00 0.00 4.34
221 222 2.095853 CGATTGTTCATCCGTTCAAGGG 59.904 50.000 0.00 0.00 0.00 3.95
222 223 3.000041 TCGATTGTTCATCCGTTCAAGG 59.000 45.455 0.00 0.00 0.00 3.61
223 224 4.661993 TTCGATTGTTCATCCGTTCAAG 57.338 40.909 0.00 0.00 0.00 3.02
224 225 4.273724 TGTTTCGATTGTTCATCCGTTCAA 59.726 37.500 0.00 0.00 0.00 2.69
225 226 3.810386 TGTTTCGATTGTTCATCCGTTCA 59.190 39.130 0.00 0.00 0.00 3.18
226 227 4.151689 TCTGTTTCGATTGTTCATCCGTTC 59.848 41.667 0.00 0.00 0.00 3.95
227 228 4.062293 TCTGTTTCGATTGTTCATCCGTT 58.938 39.130 0.00 0.00 0.00 4.44
228 229 3.659786 TCTGTTTCGATTGTTCATCCGT 58.340 40.909 0.00 0.00 0.00 4.69
229 230 4.329801 TCATCTGTTTCGATTGTTCATCCG 59.670 41.667 0.00 0.00 0.00 4.18
230 231 5.801350 TCATCTGTTTCGATTGTTCATCC 57.199 39.130 0.00 0.00 0.00 3.51
231 232 5.729883 CGTTCATCTGTTTCGATTGTTCATC 59.270 40.000 0.00 0.00 0.00 2.92
232 233 5.179368 ACGTTCATCTGTTTCGATTGTTCAT 59.821 36.000 0.00 0.00 0.00 2.57
233 234 4.509970 ACGTTCATCTGTTTCGATTGTTCA 59.490 37.500 0.00 0.00 0.00 3.18
234 235 4.840772 CACGTTCATCTGTTTCGATTGTTC 59.159 41.667 0.00 0.00 0.00 3.18
235 236 4.319477 CCACGTTCATCTGTTTCGATTGTT 60.319 41.667 0.00 0.00 0.00 2.83
236 237 3.186409 CCACGTTCATCTGTTTCGATTGT 59.814 43.478 0.00 0.00 0.00 2.71
237 238 3.424829 CCCACGTTCATCTGTTTCGATTG 60.425 47.826 0.00 0.00 0.00 2.67
238 239 2.742053 CCCACGTTCATCTGTTTCGATT 59.258 45.455 0.00 0.00 0.00 3.34
239 240 2.289444 ACCCACGTTCATCTGTTTCGAT 60.289 45.455 0.00 0.00 0.00 3.59
240 241 1.069513 ACCCACGTTCATCTGTTTCGA 59.930 47.619 0.00 0.00 0.00 3.71
241 242 1.459592 GACCCACGTTCATCTGTTTCG 59.540 52.381 0.00 0.00 0.00 3.46
242 243 1.804748 GGACCCACGTTCATCTGTTTC 59.195 52.381 0.00 0.00 0.00 2.78
243 244 1.544759 GGGACCCACGTTCATCTGTTT 60.545 52.381 5.33 0.00 0.00 2.83
244 245 0.036306 GGGACCCACGTTCATCTGTT 59.964 55.000 5.33 0.00 0.00 3.16
245 246 0.836400 AGGGACCCACGTTCATCTGT 60.836 55.000 14.60 0.00 0.00 3.41
246 247 0.324943 AAGGGACCCACGTTCATCTG 59.675 55.000 14.60 0.00 0.00 2.90
247 248 0.613777 GAAGGGACCCACGTTCATCT 59.386 55.000 14.60 0.00 35.81 2.90
248 249 0.392595 GGAAGGGACCCACGTTCATC 60.393 60.000 14.60 0.00 37.07 2.92
249 250 1.683441 GGAAGGGACCCACGTTCAT 59.317 57.895 14.60 0.00 37.07 2.57
250 251 3.153825 GGAAGGGACCCACGTTCA 58.846 61.111 14.60 0.00 37.07 3.18
258 259 1.501654 AAGCCTCAAGGGAAGGGACC 61.502 60.000 0.00 0.00 37.23 4.46
259 260 0.322906 CAAGCCTCAAGGGAAGGGAC 60.323 60.000 0.00 0.00 37.23 4.46
260 261 2.078452 CAAGCCTCAAGGGAAGGGA 58.922 57.895 0.00 0.00 37.23 4.20
261 262 1.680314 GCAAGCCTCAAGGGAAGGG 60.680 63.158 0.00 0.00 37.23 3.95
262 263 2.042831 CGCAAGCCTCAAGGGAAGG 61.043 63.158 0.00 0.00 37.23 3.46
263 264 0.606401 TTCGCAAGCCTCAAGGGAAG 60.606 55.000 0.00 0.00 37.23 3.46
264 265 0.179004 TTTCGCAAGCCTCAAGGGAA 60.179 50.000 0.00 0.00 37.23 3.97
386 387 4.157840 GTCAAAATTTGGTGGTAGGCCTAG 59.842 45.833 14.38 0.00 35.27 3.02
415 416 9.237846 GGTAAACTGGAGTAATAATACGTGTAC 57.762 37.037 0.00 0.00 37.11 2.90
417 418 6.974622 CGGTAAACTGGAGTAATAATACGTGT 59.025 38.462 0.00 0.00 37.11 4.49
418 419 6.418819 CCGGTAAACTGGAGTAATAATACGTG 59.581 42.308 1.39 0.00 45.36 4.49
419 420 6.507023 CCGGTAAACTGGAGTAATAATACGT 58.493 40.000 1.39 0.00 45.36 3.57
420 421 5.403466 GCCGGTAAACTGGAGTAATAATACG 59.597 44.000 12.29 0.00 45.36 3.06
424 425 4.440525 CGAGCCGGTAAACTGGAGTAATAA 60.441 45.833 12.29 0.00 45.36 1.40
551 569 0.973496 GTGGACTGGACTCCTCCTCC 60.973 65.000 5.23 3.10 37.48 4.30
747 765 2.745968 TGCTTTTTGGACAAGGAAGGT 58.254 42.857 10.29 0.00 0.00 3.50
769 787 4.309950 GAGGTGTGAACGCGGGGT 62.310 66.667 12.47 0.00 0.00 4.95
827 845 2.162681 GACTGGTGTGAAATGGGGAAG 58.837 52.381 0.00 0.00 0.00 3.46
888 906 4.081761 CGATTGAAGATGAAACGAAACGG 58.918 43.478 0.00 0.00 0.00 4.44
900 918 1.227263 CGGGTCGGCGATTGAAGAT 60.227 57.895 14.79 0.00 0.00 2.40
1326 1353 2.981909 TCGGCGTTGGACTCGAGT 60.982 61.111 20.18 20.18 0.00 4.18
1653 1680 1.227060 CGCCTCGCAGATCATGTCA 60.227 57.895 0.00 0.00 33.89 3.58
1830 1857 3.749064 GCACCGCAGACCTCGAGA 61.749 66.667 15.71 0.00 0.00 4.04
2523 2556 2.922503 TCCTGCTTGGCGGTCTCA 60.923 61.111 0.00 0.00 32.22 3.27
2658 2692 2.032808 CCTAGCGGCTAAAAGAATTCGC 60.033 50.000 11.39 0.00 42.91 4.70
2708 2742 5.007626 TGAATTTCCAGTTTCTCTGAACGTG 59.992 40.000 0.00 0.00 46.27 4.49
2764 2798 1.153823 CCGAGTAACCGACAGCAGG 60.154 63.158 0.00 0.00 0.00 4.85
2824 2867 1.144969 TAAACCAGCGTTGCTCTTCG 58.855 50.000 0.00 0.00 36.40 3.79
2834 2877 3.829886 TGCTCTTCATTTAAACCAGCG 57.170 42.857 0.00 0.00 0.00 5.18
2873 2916 3.232213 TGAAGAGAGAATGGCGTACAC 57.768 47.619 0.00 0.00 0.00 2.90
2892 2935 0.720027 CAGCTGAGAGCATGTCGTTG 59.280 55.000 8.42 0.00 45.56 4.10
2929 2981 3.671411 AGCGACAACGAGCGGACT 61.671 61.111 0.00 0.00 42.66 3.85
2974 3026 4.980805 TGTTCGCCCGTGACAGCC 62.981 66.667 0.00 0.00 0.00 4.85
2975 3027 1.852067 ATTTGTTCGCCCGTGACAGC 61.852 55.000 0.00 0.00 0.00 4.40
2984 3036 7.595130 GGAAAATATATCCTGAATTTGTTCGCC 59.405 37.037 1.12 0.00 33.98 5.54
3007 3059 7.630127 TCCCTTAGATTGTCCTAAAATAGGGAA 59.370 37.037 0.00 0.00 46.24 3.97
3013 3065 6.113411 CACGTCCCTTAGATTGTCCTAAAAT 58.887 40.000 0.00 0.00 0.00 1.82
3087 3147 9.219603 CACTTCTAGTCTGGTGATGAAATTTTA 57.780 33.333 0.00 0.00 32.12 1.52
3089 3149 7.227156 ACACTTCTAGTCTGGTGATGAAATTT 58.773 34.615 11.61 0.00 34.28 1.82
3098 3158 3.654414 GTCCAACACTTCTAGTCTGGTG 58.346 50.000 0.00 0.00 32.59 4.17
3100 3160 2.927014 GCGTCCAACACTTCTAGTCTGG 60.927 54.545 0.00 0.00 32.19 3.86
3105 3165 0.388649 AGCGCGTCCAACACTTCTAG 60.389 55.000 8.43 0.00 0.00 2.43
3106 3166 0.032952 AAGCGCGTCCAACACTTCTA 59.967 50.000 8.43 0.00 0.00 2.10
3107 3167 0.814010 AAAGCGCGTCCAACACTTCT 60.814 50.000 8.43 0.00 0.00 2.85
3108 3168 0.657368 CAAAGCGCGTCCAACACTTC 60.657 55.000 8.43 0.00 0.00 3.01
3109 3169 1.355210 CAAAGCGCGTCCAACACTT 59.645 52.632 8.43 0.00 0.00 3.16
3110 3170 3.022287 CAAAGCGCGTCCAACACT 58.978 55.556 8.43 0.00 0.00 3.55
3111 3171 2.725815 GCAAAGCGCGTCCAACAC 60.726 61.111 8.43 0.00 0.00 3.32
3128 3188 2.998772 ACAACAATAACAACAGCGCAG 58.001 42.857 11.47 3.33 0.00 5.18
3129 3189 3.111838 CAACAACAATAACAACAGCGCA 58.888 40.909 11.47 0.00 0.00 6.09
3130 3190 3.112580 ACAACAACAATAACAACAGCGC 58.887 40.909 0.00 0.00 0.00 5.92
3131 3191 5.398122 CCTAACAACAACAATAACAACAGCG 59.602 40.000 0.00 0.00 0.00 5.18
3132 3192 6.270064 ACCTAACAACAACAATAACAACAGC 58.730 36.000 0.00 0.00 0.00 4.40
3133 3193 8.696410 AAACCTAACAACAACAATAACAACAG 57.304 30.769 0.00 0.00 0.00 3.16
3134 3194 9.490379 AAAAACCTAACAACAACAATAACAACA 57.510 25.926 0.00 0.00 0.00 3.33
3172 3232 9.253832 AGAACCATATATTTTGAAACATGGTGA 57.746 29.630 14.77 0.00 44.05 4.02
3213 3273 9.803315 GTTCTCTGAATTTAAAAGGTTTGACTT 57.197 29.630 0.00 0.00 0.00 3.01
3214 3274 8.966868 TGTTCTCTGAATTTAAAAGGTTTGACT 58.033 29.630 0.00 0.00 0.00 3.41
3215 3275 9.750125 ATGTTCTCTGAATTTAAAAGGTTTGAC 57.250 29.630 0.00 0.00 0.00 3.18
3220 3280 9.971922 CAAGAATGTTCTCTGAATTTAAAAGGT 57.028 29.630 0.00 0.00 36.28 3.50
3221 3281 8.919661 GCAAGAATGTTCTCTGAATTTAAAAGG 58.080 33.333 0.00 0.00 36.28 3.11
3222 3282 9.688592 AGCAAGAATGTTCTCTGAATTTAAAAG 57.311 29.630 0.00 0.00 36.28 2.27
3226 3286 9.507329 ACTTAGCAAGAATGTTCTCTGAATTTA 57.493 29.630 0.00 0.00 36.28 1.40
3227 3287 8.401490 ACTTAGCAAGAATGTTCTCTGAATTT 57.599 30.769 0.00 0.00 36.28 1.82
3228 3288 7.882271 AGACTTAGCAAGAATGTTCTCTGAATT 59.118 33.333 0.00 0.00 36.28 2.17
3229 3289 7.393216 AGACTTAGCAAGAATGTTCTCTGAAT 58.607 34.615 0.00 0.00 36.28 2.57
3230 3290 6.763355 AGACTTAGCAAGAATGTTCTCTGAA 58.237 36.000 0.00 0.00 36.28 3.02
3231 3291 6.352016 AGACTTAGCAAGAATGTTCTCTGA 57.648 37.500 0.00 0.00 36.28 3.27
3232 3292 5.580297 GGAGACTTAGCAAGAATGTTCTCTG 59.420 44.000 0.00 0.00 36.28 3.35
3233 3293 5.623368 CGGAGACTTAGCAAGAATGTTCTCT 60.623 44.000 0.00 0.00 36.28 3.10
3234 3294 4.564769 CGGAGACTTAGCAAGAATGTTCTC 59.435 45.833 0.00 0.00 36.28 2.87
3235 3295 4.021016 ACGGAGACTTAGCAAGAATGTTCT 60.021 41.667 3.37 0.00 39.74 3.01
3236 3296 4.246458 ACGGAGACTTAGCAAGAATGTTC 58.754 43.478 3.37 0.00 0.00 3.18
3237 3297 4.246458 GACGGAGACTTAGCAAGAATGTT 58.754 43.478 3.37 0.00 0.00 2.71
3238 3298 3.673594 CGACGGAGACTTAGCAAGAATGT 60.674 47.826 3.37 0.00 0.00 2.71
3239 3299 2.854777 CGACGGAGACTTAGCAAGAATG 59.145 50.000 3.37 0.00 0.00 2.67
3240 3300 2.753452 TCGACGGAGACTTAGCAAGAAT 59.247 45.455 0.00 0.00 0.00 2.40
3241 3301 2.095364 GTCGACGGAGACTTAGCAAGAA 60.095 50.000 0.00 0.00 38.09 2.52
3242 3302 1.467734 GTCGACGGAGACTTAGCAAGA 59.532 52.381 0.00 0.00 38.09 3.02
3243 3303 1.897641 GTCGACGGAGACTTAGCAAG 58.102 55.000 0.00 0.00 38.09 4.01
3252 3312 1.002201 AGAAGTCTCAGTCGACGGAGA 59.998 52.381 34.87 34.87 43.17 3.71
3253 3313 1.444836 AGAAGTCTCAGTCGACGGAG 58.555 55.000 31.98 31.98 38.90 4.63
3254 3314 1.893544 AAGAAGTCTCAGTCGACGGA 58.106 50.000 17.50 17.50 38.90 4.69
3255 3315 2.708386 AAAGAAGTCTCAGTCGACGG 57.292 50.000 10.46 10.03 38.90 4.79
3256 3316 4.785417 ACTTAAAGAAGTCTCAGTCGACG 58.215 43.478 10.46 5.48 42.50 5.12
3268 3328 5.406649 AGCATCGACTGAGACTTAAAGAAG 58.593 41.667 0.00 0.00 38.76 2.85
3269 3329 5.392767 AGCATCGACTGAGACTTAAAGAA 57.607 39.130 0.00 0.00 0.00 2.52
3270 3330 5.392767 AAGCATCGACTGAGACTTAAAGA 57.607 39.130 0.00 0.00 0.00 2.52
3271 3331 7.704472 AGATAAAGCATCGACTGAGACTTAAAG 59.296 37.037 0.00 0.00 38.81 1.85
3272 3332 7.548097 AGATAAAGCATCGACTGAGACTTAAA 58.452 34.615 0.00 0.00 38.81 1.52
3273 3333 7.101652 AGATAAAGCATCGACTGAGACTTAA 57.898 36.000 0.00 0.00 38.81 1.85
3274 3334 6.701145 AGATAAAGCATCGACTGAGACTTA 57.299 37.500 0.00 0.00 38.81 2.24
3275 3335 5.590530 AGATAAAGCATCGACTGAGACTT 57.409 39.130 0.00 0.00 38.81 3.01
3276 3336 6.488344 TCATAGATAAAGCATCGACTGAGACT 59.512 38.462 0.00 0.00 38.81 3.24
3277 3337 6.673106 TCATAGATAAAGCATCGACTGAGAC 58.327 40.000 0.00 0.00 38.81 3.36
3278 3338 6.712547 TCTCATAGATAAAGCATCGACTGAGA 59.287 38.462 0.00 0.00 40.75 3.27
3279 3339 6.907741 TCTCATAGATAAAGCATCGACTGAG 58.092 40.000 0.00 0.00 38.41 3.35
3280 3340 6.884280 TCTCATAGATAAAGCATCGACTGA 57.116 37.500 0.00 0.00 38.81 3.41
3281 3341 7.311408 TGATCTCATAGATAAAGCATCGACTG 58.689 38.462 0.00 0.00 38.81 3.51
3282 3342 7.459795 TGATCTCATAGATAAAGCATCGACT 57.540 36.000 0.00 0.00 38.81 4.18
3283 3343 9.964303 ATATGATCTCATAGATAAAGCATCGAC 57.036 33.333 6.12 0.00 41.58 4.20
3295 3355 9.859152 ACGGATCTCAATATATGATCTCATAGA 57.141 33.333 9.98 2.02 41.58 1.98
3296 3356 9.896263 CACGGATCTCAATATATGATCTCATAG 57.104 37.037 9.98 0.00 41.58 2.23
3297 3357 8.355913 GCACGGATCTCAATATATGATCTCATA 58.644 37.037 9.98 2.54 42.38 2.15
3298 3358 7.147776 TGCACGGATCTCAATATATGATCTCAT 60.148 37.037 9.98 0.00 37.44 2.90
3299 3359 6.153340 TGCACGGATCTCAATATATGATCTCA 59.847 38.462 9.98 0.00 37.44 3.27
3300 3360 6.567959 TGCACGGATCTCAATATATGATCTC 58.432 40.000 9.98 2.76 37.44 2.75
3301 3361 6.535963 TGCACGGATCTCAATATATGATCT 57.464 37.500 9.98 0.00 37.44 2.75
3302 3362 7.332926 ACTTTGCACGGATCTCAATATATGATC 59.667 37.037 0.00 3.87 37.44 2.92
3303 3363 7.164122 ACTTTGCACGGATCTCAATATATGAT 58.836 34.615 0.00 0.00 37.44 2.45
3304 3364 6.524734 ACTTTGCACGGATCTCAATATATGA 58.475 36.000 0.00 0.00 36.38 2.15
3305 3365 6.791887 ACTTTGCACGGATCTCAATATATG 57.208 37.500 0.00 0.00 0.00 1.78
3306 3366 8.939929 CATAACTTTGCACGGATCTCAATATAT 58.060 33.333 0.00 0.00 0.00 0.86
3307 3367 7.931407 ACATAACTTTGCACGGATCTCAATATA 59.069 33.333 0.00 0.00 0.00 0.86
3308 3368 6.767902 ACATAACTTTGCACGGATCTCAATAT 59.232 34.615 0.00 0.00 0.00 1.28
3309 3369 6.112734 ACATAACTTTGCACGGATCTCAATA 58.887 36.000 0.00 0.00 0.00 1.90
3310 3370 4.943705 ACATAACTTTGCACGGATCTCAAT 59.056 37.500 0.00 0.00 0.00 2.57
3311 3371 4.323417 ACATAACTTTGCACGGATCTCAA 58.677 39.130 0.00 0.00 0.00 3.02
3312 3372 3.932710 GACATAACTTTGCACGGATCTCA 59.067 43.478 0.00 0.00 0.00 3.27
3313 3373 3.932710 TGACATAACTTTGCACGGATCTC 59.067 43.478 0.00 0.00 0.00 2.75
3314 3374 3.937814 TGACATAACTTTGCACGGATCT 58.062 40.909 0.00 0.00 0.00 2.75
3315 3375 4.882671 ATGACATAACTTTGCACGGATC 57.117 40.909 0.00 0.00 0.00 3.36
3316 3376 5.401550 CAAATGACATAACTTTGCACGGAT 58.598 37.500 0.00 0.00 0.00 4.18
3317 3377 4.320861 CCAAATGACATAACTTTGCACGGA 60.321 41.667 0.00 0.00 0.00 4.69
3318 3378 3.919804 CCAAATGACATAACTTTGCACGG 59.080 43.478 0.00 0.00 0.00 4.94
3319 3379 3.364621 GCCAAATGACATAACTTTGCACG 59.635 43.478 0.00 0.00 0.00 5.34
3320 3380 4.386652 CAGCCAAATGACATAACTTTGCAC 59.613 41.667 0.00 0.00 0.00 4.57
3321 3381 4.280425 TCAGCCAAATGACATAACTTTGCA 59.720 37.500 0.00 0.00 0.00 4.08
3322 3382 4.808558 TCAGCCAAATGACATAACTTTGC 58.191 39.130 0.00 0.00 0.00 3.68
3323 3383 6.072286 AGTCTCAGCCAAATGACATAACTTTG 60.072 38.462 0.00 0.00 32.41 2.77
3324 3384 6.006449 AGTCTCAGCCAAATGACATAACTTT 58.994 36.000 0.00 0.00 32.41 2.66
3325 3385 5.564550 AGTCTCAGCCAAATGACATAACTT 58.435 37.500 0.00 0.00 32.41 2.66
3326 3386 5.171339 AGTCTCAGCCAAATGACATAACT 57.829 39.130 0.00 0.00 32.41 2.24
3327 3387 5.392380 CCAAGTCTCAGCCAAATGACATAAC 60.392 44.000 0.00 0.00 32.41 1.89
3328 3388 4.701651 CCAAGTCTCAGCCAAATGACATAA 59.298 41.667 0.00 0.00 32.41 1.90
3329 3389 4.263462 ACCAAGTCTCAGCCAAATGACATA 60.263 41.667 0.00 0.00 32.41 2.29
3330 3390 3.087031 CCAAGTCTCAGCCAAATGACAT 58.913 45.455 0.00 0.00 32.41 3.06
3331 3391 2.158623 ACCAAGTCTCAGCCAAATGACA 60.159 45.455 0.00 0.00 32.41 3.58
3332 3392 2.508526 ACCAAGTCTCAGCCAAATGAC 58.491 47.619 0.00 0.00 0.00 3.06
3333 3393 2.957402 ACCAAGTCTCAGCCAAATGA 57.043 45.000 0.00 0.00 0.00 2.57
3334 3394 5.452078 TTTAACCAAGTCTCAGCCAAATG 57.548 39.130 0.00 0.00 0.00 2.32
3335 3395 6.012745 AGATTTAACCAAGTCTCAGCCAAAT 58.987 36.000 0.00 0.00 0.00 2.32
3336 3396 5.385198 AGATTTAACCAAGTCTCAGCCAAA 58.615 37.500 0.00 0.00 0.00 3.28
3337 3397 4.985538 AGATTTAACCAAGTCTCAGCCAA 58.014 39.130 0.00 0.00 0.00 4.52
3338 3398 4.041567 TGAGATTTAACCAAGTCTCAGCCA 59.958 41.667 8.09 0.00 46.61 4.75
3339 3399 4.579869 TGAGATTTAACCAAGTCTCAGCC 58.420 43.478 8.09 0.00 46.61 4.85
3343 3403 6.931840 AGTTGACTGAGATTTAACCAAGTCTC 59.068 38.462 0.00 3.67 44.01 3.36
3344 3404 6.708054 CAGTTGACTGAGATTTAACCAAGTCT 59.292 38.462 5.19 0.00 46.59 3.24
3345 3405 6.892691 CAGTTGACTGAGATTTAACCAAGTC 58.107 40.000 5.19 0.00 46.59 3.01
3346 3406 6.867662 CAGTTGACTGAGATTTAACCAAGT 57.132 37.500 5.19 0.00 46.59 3.16
3359 3419 4.956075 TATGGCTACATCTCAGTTGACTGA 59.044 41.667 12.83 12.83 43.00 3.41
3360 3420 3.599730 TGGCTACATCTCAGTTGACTG 57.400 47.619 4.77 4.77 45.08 3.51
3361 3421 4.100189 GGTATGGCTACATCTCAGTTGACT 59.900 45.833 0.00 0.00 38.53 3.41
3362 3422 4.372656 GGTATGGCTACATCTCAGTTGAC 58.627 47.826 0.00 0.00 38.53 3.18
3363 3423 3.388024 GGGTATGGCTACATCTCAGTTGA 59.612 47.826 0.00 0.00 38.53 3.18
3364 3424 3.389329 AGGGTATGGCTACATCTCAGTTG 59.611 47.826 0.00 0.00 38.53 3.16
3365 3425 3.658725 AGGGTATGGCTACATCTCAGTT 58.341 45.455 0.00 0.00 38.53 3.16
3366 3426 3.336509 AGGGTATGGCTACATCTCAGT 57.663 47.619 0.00 0.00 38.53 3.41
3367 3427 3.643320 TGAAGGGTATGGCTACATCTCAG 59.357 47.826 0.00 0.00 38.53 3.35
3368 3428 3.643320 CTGAAGGGTATGGCTACATCTCA 59.357 47.826 0.00 0.00 38.53 3.27
3369 3429 3.898123 TCTGAAGGGTATGGCTACATCTC 59.102 47.826 0.00 0.00 38.53 2.75
3370 3430 3.900601 CTCTGAAGGGTATGGCTACATCT 59.099 47.826 0.00 0.00 38.53 2.90
3371 3431 3.898123 TCTCTGAAGGGTATGGCTACATC 59.102 47.826 0.00 0.00 38.53 3.06
3372 3432 3.928754 TCTCTGAAGGGTATGGCTACAT 58.071 45.455 0.00 0.00 41.13 2.29
3373 3433 3.398318 TCTCTGAAGGGTATGGCTACA 57.602 47.619 0.00 0.00 0.00 2.74
3374 3434 4.755266 TTTCTCTGAAGGGTATGGCTAC 57.245 45.455 0.00 0.00 0.00 3.58
3375 3435 8.917414 ATATATTTCTCTGAAGGGTATGGCTA 57.083 34.615 0.00 0.00 0.00 3.93
3376 3436 7.459125 TGATATATTTCTCTGAAGGGTATGGCT 59.541 37.037 0.00 0.00 0.00 4.75
3377 3437 7.624549 TGATATATTTCTCTGAAGGGTATGGC 58.375 38.462 0.00 0.00 0.00 4.40
3464 3524 8.556194 GCAAAATATCGACATCCACAGTATAAA 58.444 33.333 0.00 0.00 0.00 1.40
3465 3525 7.931407 AGCAAAATATCGACATCCACAGTATAA 59.069 33.333 0.00 0.00 0.00 0.98
3466 3526 7.441836 AGCAAAATATCGACATCCACAGTATA 58.558 34.615 0.00 0.00 0.00 1.47
3467 3527 6.291377 AGCAAAATATCGACATCCACAGTAT 58.709 36.000 0.00 0.00 0.00 2.12
3468 3528 5.670485 AGCAAAATATCGACATCCACAGTA 58.330 37.500 0.00 0.00 0.00 2.74
3469 3529 4.517285 AGCAAAATATCGACATCCACAGT 58.483 39.130 0.00 0.00 0.00 3.55
3470 3530 4.813161 AGAGCAAAATATCGACATCCACAG 59.187 41.667 0.00 0.00 0.00 3.66
3471 3531 4.571984 CAGAGCAAAATATCGACATCCACA 59.428 41.667 0.00 0.00 0.00 4.17
3472 3532 4.811024 TCAGAGCAAAATATCGACATCCAC 59.189 41.667 0.00 0.00 0.00 4.02
3473 3533 5.022282 TCAGAGCAAAATATCGACATCCA 57.978 39.130 0.00 0.00 0.00 3.41
3474 3534 4.084118 GCTCAGAGCAAAATATCGACATCC 60.084 45.833 18.17 0.00 41.89 3.51
3475 3535 4.749099 AGCTCAGAGCAAAATATCGACATC 59.251 41.667 24.64 0.00 45.56 3.06
3476 3536 4.701765 AGCTCAGAGCAAAATATCGACAT 58.298 39.130 24.64 0.00 45.56 3.06
3477 3537 4.128925 AGCTCAGAGCAAAATATCGACA 57.871 40.909 24.64 0.00 45.56 4.35
3478 3538 4.260538 CCAAGCTCAGAGCAAAATATCGAC 60.261 45.833 24.64 0.00 45.56 4.20
3479 3539 3.873361 CCAAGCTCAGAGCAAAATATCGA 59.127 43.478 24.64 0.00 45.56 3.59
3480 3540 3.624861 ACCAAGCTCAGAGCAAAATATCG 59.375 43.478 24.64 5.16 45.56 2.92
3481 3541 4.637534 TGACCAAGCTCAGAGCAAAATATC 59.362 41.667 24.64 13.39 45.56 1.63
3482 3542 4.592942 TGACCAAGCTCAGAGCAAAATAT 58.407 39.130 24.64 4.48 45.56 1.28
3483 3543 4.019792 TGACCAAGCTCAGAGCAAAATA 57.980 40.909 24.64 3.36 45.56 1.40
3484 3544 2.867624 TGACCAAGCTCAGAGCAAAAT 58.132 42.857 24.64 7.06 45.56 1.82
3485 3545 2.346766 TGACCAAGCTCAGAGCAAAA 57.653 45.000 24.64 0.90 45.56 2.44
3486 3546 2.346766 TTGACCAAGCTCAGAGCAAA 57.653 45.000 24.64 5.97 45.56 3.68
3487 3547 2.224606 CTTTGACCAAGCTCAGAGCAA 58.775 47.619 24.64 5.85 45.56 3.91
3488 3548 1.141657 ACTTTGACCAAGCTCAGAGCA 59.858 47.619 24.64 0.00 45.56 4.26
3489 3549 1.889545 ACTTTGACCAAGCTCAGAGC 58.110 50.000 15.25 15.25 42.84 4.09
3490 3550 4.527509 TCTACTTTGACCAAGCTCAGAG 57.472 45.455 0.00 0.00 35.65 3.35
3491 3551 4.588951 TCTTCTACTTTGACCAAGCTCAGA 59.411 41.667 0.00 0.00 35.65 3.27
3492 3552 4.887748 TCTTCTACTTTGACCAAGCTCAG 58.112 43.478 0.00 0.00 35.65 3.35
3493 3553 4.955811 TCTTCTACTTTGACCAAGCTCA 57.044 40.909 0.00 0.00 35.65 4.26
3494 3554 6.809630 ATTTCTTCTACTTTGACCAAGCTC 57.190 37.500 0.00 0.00 35.65 4.09
3495 3555 7.285401 TCAAATTTCTTCTACTTTGACCAAGCT 59.715 33.333 0.00 0.00 35.65 3.74
3496 3556 7.425606 TCAAATTTCTTCTACTTTGACCAAGC 58.574 34.615 0.00 0.00 35.65 4.01
3497 3557 9.971922 AATCAAATTTCTTCTACTTTGACCAAG 57.028 29.630 0.00 0.00 39.60 3.61
3552 3612 8.772705 GCCAAACTAAACATTTCATCAATTTCA 58.227 29.630 0.00 0.00 0.00 2.69
3553 3613 7.951565 CGCCAAACTAAACATTTCATCAATTTC 59.048 33.333 0.00 0.00 0.00 2.17
3554 3614 7.095271 CCGCCAAACTAAACATTTCATCAATTT 60.095 33.333 0.00 0.00 0.00 1.82
3555 3615 6.368516 CCGCCAAACTAAACATTTCATCAATT 59.631 34.615 0.00 0.00 0.00 2.32
3556 3616 5.868801 CCGCCAAACTAAACATTTCATCAAT 59.131 36.000 0.00 0.00 0.00 2.57
3557 3617 5.226396 CCGCCAAACTAAACATTTCATCAA 58.774 37.500 0.00 0.00 0.00 2.57
3558 3618 4.321601 CCCGCCAAACTAAACATTTCATCA 60.322 41.667 0.00 0.00 0.00 3.07
3559 3619 4.173256 CCCGCCAAACTAAACATTTCATC 58.827 43.478 0.00 0.00 0.00 2.92
3560 3620 3.576550 ACCCGCCAAACTAAACATTTCAT 59.423 39.130 0.00 0.00 0.00 2.57
3561 3621 2.959707 ACCCGCCAAACTAAACATTTCA 59.040 40.909 0.00 0.00 0.00 2.69
3562 3622 3.313690 CACCCGCCAAACTAAACATTTC 58.686 45.455 0.00 0.00 0.00 2.17
3563 3623 2.036604 CCACCCGCCAAACTAAACATTT 59.963 45.455 0.00 0.00 0.00 2.32
3564 3624 1.616374 CCACCCGCCAAACTAAACATT 59.384 47.619 0.00 0.00 0.00 2.71
3565 3625 1.253100 CCACCCGCCAAACTAAACAT 58.747 50.000 0.00 0.00 0.00 2.71
3566 3626 0.106619 ACCACCCGCCAAACTAAACA 60.107 50.000 0.00 0.00 0.00 2.83
3567 3627 0.312729 CACCACCCGCCAAACTAAAC 59.687 55.000 0.00 0.00 0.00 2.01
3568 3628 0.824182 CCACCACCCGCCAAACTAAA 60.824 55.000 0.00 0.00 0.00 1.85
3569 3629 1.228306 CCACCACCCGCCAAACTAA 60.228 57.895 0.00 0.00 0.00 2.24
3570 3630 2.119484 CTCCACCACCCGCCAAACTA 62.119 60.000 0.00 0.00 0.00 2.24
3571 3631 3.491598 CTCCACCACCCGCCAAACT 62.492 63.158 0.00 0.00 0.00 2.66
3572 3632 2.764637 ATCTCCACCACCCGCCAAAC 62.765 60.000 0.00 0.00 0.00 2.93
3573 3633 2.534396 ATCTCCACCACCCGCCAAA 61.534 57.895 0.00 0.00 0.00 3.28
3574 3634 2.933287 ATCTCCACCACCCGCCAA 60.933 61.111 0.00 0.00 0.00 4.52
3575 3635 3.716195 CATCTCCACCACCCGCCA 61.716 66.667 0.00 0.00 0.00 5.69
3576 3636 1.407656 TATCATCTCCACCACCCGCC 61.408 60.000 0.00 0.00 0.00 6.13
3577 3637 0.687354 ATATCATCTCCACCACCCGC 59.313 55.000 0.00 0.00 0.00 6.13
3578 3638 3.056536 CACTATATCATCTCCACCACCCG 60.057 52.174 0.00 0.00 0.00 5.28
3579 3639 3.307059 GCACTATATCATCTCCACCACCC 60.307 52.174 0.00 0.00 0.00 4.61
3580 3640 3.931578 GCACTATATCATCTCCACCACC 58.068 50.000 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.