Multiple sequence alignment - TraesCS3A01G208500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G208500 chr3A 100.000 2504 0 0 1 2504 369298716 369301219 0.000000e+00 4625.0
1 TraesCS3A01G208500 chr3A 93.294 1521 89 8 992 2504 309401522 309403037 0.000000e+00 2231.0
2 TraesCS3A01G208500 chr3A 93.133 1529 89 9 984 2501 382449185 382450708 0.000000e+00 2228.0
3 TraesCS3A01G208500 chr3A 83.529 255 28 10 181 421 382438650 382438396 2.510000e-55 226.0
4 TraesCS3A01G208500 chr2A 93.407 1532 89 7 984 2504 63290811 63292341 0.000000e+00 2259.0
5 TraesCS3A01G208500 chr2A 93.081 1532 93 8 984 2504 642055397 642053868 0.000000e+00 2230.0
6 TraesCS3A01G208500 chr1A 93.342 1532 88 10 984 2503 225609426 225607897 0.000000e+00 2252.0
7 TraesCS3A01G208500 chr1A 93.268 1530 91 7 984 2501 157365632 157364103 0.000000e+00 2244.0
8 TraesCS3A01G208500 chr1A 93.029 1535 92 10 984 2504 464780326 464778793 0.000000e+00 2228.0
9 TraesCS3A01G208500 chr1A 95.928 663 17 1 1 653 457828950 457829612 0.000000e+00 1066.0
10 TraesCS3A01G208500 chr1A 95.798 357 12 3 648 1004 457830775 457831128 7.770000e-160 573.0
11 TraesCS3A01G208500 chr1A 85.075 268 24 11 181 433 424762450 424762716 2.470000e-65 259.0
12 TraesCS3A01G208500 chr1A 83.462 260 28 11 181 425 179453262 179453521 6.970000e-56 228.0
13 TraesCS3A01G208500 chr4A 93.246 1525 92 7 989 2504 198084847 198086369 0.000000e+00 2235.0
14 TraesCS3A01G208500 chr4A 85.882 255 22 10 181 421 138464763 138464509 2.470000e-65 259.0
15 TraesCS3A01G208500 chr4A 92.571 175 13 0 21 195 517406632 517406458 4.130000e-63 252.0
16 TraesCS3A01G208500 chr6A 93.237 1523 92 7 992 2504 238086951 238088472 0.000000e+00 2231.0
17 TraesCS3A01G208500 chr1B 86.410 493 46 10 5 487 500268643 500268162 1.030000e-143 520.0
18 TraesCS3A01G208500 chr1B 78.736 823 95 50 181 962 304005832 304006615 6.270000e-131 477.0
19 TraesCS3A01G208500 chr1B 78.824 510 54 23 180 648 196866424 196865928 6.770000e-76 294.0
20 TraesCS3A01G208500 chr3B 88.701 354 34 6 646 995 457423207 457422856 6.400000e-116 427.0
21 TraesCS3A01G208500 chr3B 94.048 168 10 0 21 188 112325137 112325304 3.200000e-64 255.0
22 TraesCS3A01G208500 chr2D 88.012 342 36 5 646 984 476330913 476330574 1.400000e-107 399.0
23 TraesCS3A01G208500 chr2D 95.062 162 8 0 21 182 362930969 362930808 3.200000e-64 255.0
24 TraesCS3A01G208500 chr5B 87.906 339 38 3 648 984 616583758 616584095 1.800000e-106 396.0
25 TraesCS3A01G208500 chr5B 82.283 254 29 13 181 421 68485787 68486037 3.260000e-49 206.0
26 TraesCS3A01G208500 chr5B 88.406 69 8 0 580 648 246489740 246489672 1.600000e-12 84.2
27 TraesCS3A01G208500 chr7B 87.143 350 40 5 646 993 634064321 634063975 2.330000e-105 392.0
28 TraesCS3A01G208500 chr7B 86.034 358 44 6 646 1001 129306956 129306603 1.820000e-101 379.0
29 TraesCS3A01G208500 chr7B 86.080 352 41 5 646 994 473410019 473409673 3.040000e-99 372.0
30 TraesCS3A01G208500 chr6D 87.069 348 42 3 646 992 93474886 93475231 8.400000e-105 390.0
31 TraesCS3A01G208500 chr6D 84.286 70 11 0 573 642 16121631 16121700 4.470000e-08 69.4
32 TraesCS3A01G208500 chr6D 95.238 42 1 1 601 642 93474802 93474842 5.780000e-07 65.8
33 TraesCS3A01G208500 chr3D 86.628 344 39 6 646 984 597888880 597888539 8.460000e-100 374.0
34 TraesCS3A01G208500 chr3D 94.737 171 7 1 14 182 537154693 537154863 5.310000e-67 265.0
35 TraesCS3A01G208500 chr4D 86.061 330 40 4 660 984 126521589 126521917 1.430000e-92 350.0
36 TraesCS3A01G208500 chr4D 84.706 255 25 10 181 421 349446534 349446280 2.490000e-60 243.0
37 TraesCS3A01G208500 chr1D 95.732 164 7 0 20 183 463382067 463381904 5.310000e-67 265.0
38 TraesCS3A01G208500 chr5D 94.012 167 10 0 16 182 53583072 53583238 1.150000e-63 254.0
39 TraesCS3A01G208500 chr7A 85.433 254 24 9 181 421 269298921 269299174 4.130000e-63 252.0
40 TraesCS3A01G208500 chr4B 93.064 173 10 2 21 191 135218210 135218038 4.130000e-63 252.0
41 TraesCS3A01G208500 chr4B 83.871 93 15 0 556 648 178316438 178316346 3.430000e-14 89.8
42 TraesCS3A01G208500 chr2B 84.874 119 18 0 524 642 341012556 341012674 1.220000e-23 121.0
43 TraesCS3A01G208500 chr2B 85.714 112 14 2 530 640 391484780 391484890 1.570000e-22 117.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G208500 chr3A 369298716 369301219 2503 False 4625.0 4625 100.000 1 2504 1 chr3A.!!$F2 2503
1 TraesCS3A01G208500 chr3A 309401522 309403037 1515 False 2231.0 2231 93.294 992 2504 1 chr3A.!!$F1 1512
2 TraesCS3A01G208500 chr3A 382449185 382450708 1523 False 2228.0 2228 93.133 984 2501 1 chr3A.!!$F3 1517
3 TraesCS3A01G208500 chr2A 63290811 63292341 1530 False 2259.0 2259 93.407 984 2504 1 chr2A.!!$F1 1520
4 TraesCS3A01G208500 chr2A 642053868 642055397 1529 True 2230.0 2230 93.081 984 2504 1 chr2A.!!$R1 1520
5 TraesCS3A01G208500 chr1A 225607897 225609426 1529 True 2252.0 2252 93.342 984 2503 1 chr1A.!!$R2 1519
6 TraesCS3A01G208500 chr1A 157364103 157365632 1529 True 2244.0 2244 93.268 984 2501 1 chr1A.!!$R1 1517
7 TraesCS3A01G208500 chr1A 464778793 464780326 1533 True 2228.0 2228 93.029 984 2504 1 chr1A.!!$R3 1520
8 TraesCS3A01G208500 chr1A 457828950 457831128 2178 False 819.5 1066 95.863 1 1004 2 chr1A.!!$F3 1003
9 TraesCS3A01G208500 chr4A 198084847 198086369 1522 False 2235.0 2235 93.246 989 2504 1 chr4A.!!$F1 1515
10 TraesCS3A01G208500 chr6A 238086951 238088472 1521 False 2231.0 2231 93.237 992 2504 1 chr6A.!!$F1 1512
11 TraesCS3A01G208500 chr1B 304005832 304006615 783 False 477.0 477 78.736 181 962 1 chr1B.!!$F1 781

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
508 520 0.035439 TCTCGCCCAAATGAGGAACC 60.035 55.0 0.0 0.0 33.0 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1832 3596 0.178068 TTGGCATTCTCGTAGGCCTC 59.822 55.0 9.68 0.0 46.53 4.7 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 5.862678 AGCTCTACTGAAATACTTCCTCC 57.137 43.478 0.00 0.00 0.00 4.30
46 47 7.724287 ACTTCCTCCGTTCCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
47 48 7.564292 ACTTCCTCCGTTCCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
48 49 7.909485 TCCTCCGTTCCTAAATATAAGTCTT 57.091 36.000 0.00 0.00 0.00 3.01
49 50 8.315220 TCCTCCGTTCCTAAATATAAGTCTTT 57.685 34.615 0.00 0.00 0.00 2.52
50 51 8.419442 TCCTCCGTTCCTAAATATAAGTCTTTC 58.581 37.037 0.00 0.00 0.00 2.62
51 52 8.422566 CCTCCGTTCCTAAATATAAGTCTTTCT 58.577 37.037 0.00 0.00 0.00 2.52
78 79 8.404000 AGAGATTACACTACAAACTACATACGG 58.596 37.037 0.00 0.00 0.00 4.02
79 80 8.284945 AGATTACACTACAAACTACATACGGA 57.715 34.615 0.00 0.00 0.00 4.69
80 81 8.910944 AGATTACACTACAAACTACATACGGAT 58.089 33.333 0.00 0.00 0.00 4.18
81 82 8.867112 ATTACACTACAAACTACATACGGATG 57.133 34.615 5.94 5.94 39.16 3.51
83 84 7.395190 ACACTACAAACTACATACGGATGTA 57.605 36.000 19.32 19.32 44.77 2.29
84 85 8.004087 ACACTACAAACTACATACGGATGTAT 57.996 34.615 20.64 8.38 45.42 2.29
85 86 9.123902 ACACTACAAACTACATACGGATGTATA 57.876 33.333 20.64 9.08 45.42 1.47
123 124 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
124 125 5.349817 AGTGTAGATTCACTCATTTTGCTCG 59.650 40.000 0.00 0.00 44.07 5.03
125 126 4.631377 TGTAGATTCACTCATTTTGCTCGG 59.369 41.667 0.00 0.00 0.00 4.63
126 127 3.679389 AGATTCACTCATTTTGCTCGGT 58.321 40.909 0.00 0.00 0.00 4.69
127 128 4.832248 AGATTCACTCATTTTGCTCGGTA 58.168 39.130 0.00 0.00 0.00 4.02
128 129 5.431765 AGATTCACTCATTTTGCTCGGTAT 58.568 37.500 0.00 0.00 0.00 2.73
129 130 6.582636 AGATTCACTCATTTTGCTCGGTATA 58.417 36.000 0.00 0.00 0.00 1.47
130 131 7.220030 AGATTCACTCATTTTGCTCGGTATAT 58.780 34.615 0.00 0.00 0.00 0.86
131 132 8.367911 AGATTCACTCATTTTGCTCGGTATATA 58.632 33.333 0.00 0.00 0.00 0.86
132 133 7.946655 TTCACTCATTTTGCTCGGTATATAG 57.053 36.000 0.00 0.00 0.00 1.31
133 134 7.050970 TCACTCATTTTGCTCGGTATATAGT 57.949 36.000 0.00 0.00 0.00 2.12
134 135 7.145985 TCACTCATTTTGCTCGGTATATAGTC 58.854 38.462 0.00 0.00 0.00 2.59
135 136 6.366332 CACTCATTTTGCTCGGTATATAGTCC 59.634 42.308 0.00 0.00 0.00 3.85
136 137 5.466819 TCATTTTGCTCGGTATATAGTCCG 58.533 41.667 10.82 10.82 46.93 4.79
137 138 4.924305 TTTTGCTCGGTATATAGTCCGT 57.076 40.909 14.94 0.00 45.88 4.69
138 139 6.207221 TCATTTTGCTCGGTATATAGTCCGTA 59.793 38.462 14.94 5.05 45.88 4.02
139 140 6.389830 TTTTGCTCGGTATATAGTCCGTAA 57.610 37.500 14.94 8.67 45.88 3.18
140 141 6.579666 TTTGCTCGGTATATAGTCCGTAAT 57.420 37.500 14.94 0.00 45.88 1.89
141 142 7.686438 TTTGCTCGGTATATAGTCCGTAATA 57.314 36.000 14.94 0.04 45.88 0.98
142 143 6.915544 TGCTCGGTATATAGTCCGTAATAG 57.084 41.667 14.94 8.48 45.88 1.73
143 144 6.643388 TGCTCGGTATATAGTCCGTAATAGA 58.357 40.000 14.94 0.00 45.88 1.98
144 145 7.105588 TGCTCGGTATATAGTCCGTAATAGAA 58.894 38.462 14.94 1.60 45.88 2.10
145 146 7.772292 TGCTCGGTATATAGTCCGTAATAGAAT 59.228 37.037 14.94 0.00 45.88 2.40
146 147 8.281893 GCTCGGTATATAGTCCGTAATAGAATC 58.718 40.741 14.94 0.00 45.88 2.52
147 148 9.545105 CTCGGTATATAGTCCGTAATAGAATCT 57.455 37.037 14.94 0.00 45.88 2.40
148 149 9.539825 TCGGTATATAGTCCGTAATAGAATCTC 57.460 37.037 14.94 0.00 45.88 2.75
149 150 9.545105 CGGTATATAGTCCGTAATAGAATCTCT 57.455 37.037 9.37 0.00 41.58 3.10
176 177 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
177 178 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
178 179 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
179 180 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
184 185 3.463048 TTAGGAACGGAGGGAGTACTT 57.537 47.619 0.00 0.00 0.00 2.24
218 219 7.014808 CCATTTTAAACCCAGACCTGACTTTAA 59.985 37.037 0.00 3.88 0.00 1.52
221 222 7.754851 TTAAACCCAGACCTGACTTTAAATC 57.245 36.000 0.00 0.00 0.00 2.17
226 227 6.434340 ACCCAGACCTGACTTTAAATCATTTC 59.566 38.462 0.00 0.00 0.00 2.17
284 296 2.434336 TGACCTGCCACTCCATGTATAC 59.566 50.000 0.00 0.00 0.00 1.47
301 313 6.474819 TGTATACATGAAAAACGACCACAG 57.525 37.500 0.08 0.00 0.00 3.66
322 334 3.993736 AGTTTTGCTGTTGTGTTTTGGTC 59.006 39.130 0.00 0.00 0.00 4.02
327 339 3.194329 TGCTGTTGTGTTTTGGTCAATCA 59.806 39.130 0.00 0.00 0.00 2.57
330 342 5.737063 GCTGTTGTGTTTTGGTCAATCATCT 60.737 40.000 0.00 0.00 0.00 2.90
337 349 3.829886 TTGGTCAATCATCTGCGTTTC 57.170 42.857 0.00 0.00 0.00 2.78
338 350 2.777094 TGGTCAATCATCTGCGTTTCA 58.223 42.857 0.00 0.00 0.00 2.69
347 359 4.832248 TCATCTGCGTTTCAATTCCTACT 58.168 39.130 0.00 0.00 0.00 2.57
356 368 6.333416 CGTTTCAATTCCTACTGATCTCTCA 58.667 40.000 0.00 0.00 0.00 3.27
358 370 7.168972 CGTTTCAATTCCTACTGATCTCTCATC 59.831 40.741 0.00 0.00 0.00 2.92
360 372 9.426534 TTTCAATTCCTACTGATCTCTCATCTA 57.573 33.333 0.00 0.00 0.00 1.98
369 381 6.839454 ACTGATCTCTCATCTATTTGGCAAT 58.161 36.000 0.00 0.00 0.00 3.56
409 421 0.881118 CCAACCCAAGACAACATCGG 59.119 55.000 0.00 0.00 0.00 4.18
410 422 1.604604 CAACCCAAGACAACATCGGT 58.395 50.000 0.00 0.00 0.00 4.69
411 423 2.551287 CCAACCCAAGACAACATCGGTA 60.551 50.000 0.00 0.00 0.00 4.02
412 424 2.467566 ACCCAAGACAACATCGGTAC 57.532 50.000 0.00 0.00 0.00 3.34
413 425 1.975680 ACCCAAGACAACATCGGTACT 59.024 47.619 0.00 0.00 0.00 2.73
414 426 3.167485 ACCCAAGACAACATCGGTACTA 58.833 45.455 0.00 0.00 0.00 1.82
415 427 3.773119 ACCCAAGACAACATCGGTACTAT 59.227 43.478 0.00 0.00 0.00 2.12
416 428 4.142004 ACCCAAGACAACATCGGTACTATC 60.142 45.833 0.00 0.00 0.00 2.08
417 429 4.369182 CCAAGACAACATCGGTACTATCC 58.631 47.826 0.00 0.00 0.00 2.59
418 430 4.099573 CCAAGACAACATCGGTACTATCCT 59.900 45.833 0.00 0.00 0.00 3.24
419 431 5.395324 CCAAGACAACATCGGTACTATCCTT 60.395 44.000 0.00 0.00 0.00 3.36
420 432 5.517322 AGACAACATCGGTACTATCCTTC 57.483 43.478 0.00 0.00 0.00 3.46
421 433 4.954202 AGACAACATCGGTACTATCCTTCA 59.046 41.667 0.00 0.00 0.00 3.02
422 434 5.421056 AGACAACATCGGTACTATCCTTCAA 59.579 40.000 0.00 0.00 0.00 2.69
423 435 6.098409 AGACAACATCGGTACTATCCTTCAAT 59.902 38.462 0.00 0.00 0.00 2.57
424 436 7.287005 AGACAACATCGGTACTATCCTTCAATA 59.713 37.037 0.00 0.00 0.00 1.90
425 437 7.788026 ACAACATCGGTACTATCCTTCAATAA 58.212 34.615 0.00 0.00 0.00 1.40
426 438 8.262227 ACAACATCGGTACTATCCTTCAATAAA 58.738 33.333 0.00 0.00 0.00 1.40
427 439 8.765219 CAACATCGGTACTATCCTTCAATAAAG 58.235 37.037 0.00 0.00 34.52 1.85
428 440 8.246430 ACATCGGTACTATCCTTCAATAAAGA 57.754 34.615 0.00 0.00 37.12 2.52
429 441 8.701895 ACATCGGTACTATCCTTCAATAAAGAA 58.298 33.333 0.00 0.00 37.12 2.52
430 442 9.542462 CATCGGTACTATCCTTCAATAAAGAAA 57.458 33.333 0.00 0.00 37.12 2.52
441 453 9.806203 TCCTTCAATAAAGAAAATACATGCATG 57.194 29.630 25.09 25.09 37.12 4.06
442 454 8.545420 CCTTCAATAAAGAAAATACATGCATGC 58.455 33.333 26.53 11.82 37.12 4.06
443 455 8.999220 TTCAATAAAGAAAATACATGCATGCA 57.001 26.923 26.53 25.04 0.00 3.96
444 456 8.637281 TCAATAAAGAAAATACATGCATGCAG 57.363 30.769 26.69 19.15 0.00 4.41
445 457 8.468399 TCAATAAAGAAAATACATGCATGCAGA 58.532 29.630 26.69 14.05 0.00 4.26
446 458 8.752254 CAATAAAGAAAATACATGCATGCAGAG 58.248 33.333 26.69 22.00 0.00 3.35
447 459 6.519679 AAAGAAAATACATGCATGCAGAGA 57.480 33.333 26.69 13.30 0.00 3.10
448 460 6.519679 AAGAAAATACATGCATGCAGAGAA 57.480 33.333 26.69 11.61 0.00 2.87
449 461 6.519679 AGAAAATACATGCATGCAGAGAAA 57.480 33.333 26.69 14.13 0.00 2.52
450 462 7.108841 AGAAAATACATGCATGCAGAGAAAT 57.891 32.000 26.69 15.55 0.00 2.17
451 463 7.201145 AGAAAATACATGCATGCAGAGAAATC 58.799 34.615 26.69 17.04 0.00 2.17
452 464 6.710597 AAATACATGCATGCAGAGAAATCT 57.289 33.333 26.69 3.09 0.00 2.40
453 465 5.690997 ATACATGCATGCAGAGAAATCTG 57.309 39.130 26.69 18.14 40.51 2.90
454 466 3.617284 ACATGCATGCAGAGAAATCTGA 58.383 40.909 26.69 0.00 39.99 3.27
455 467 4.014406 ACATGCATGCAGAGAAATCTGAA 58.986 39.130 26.69 0.00 39.99 3.02
456 468 4.461431 ACATGCATGCAGAGAAATCTGAAA 59.539 37.500 26.69 0.00 39.99 2.69
457 469 5.127194 ACATGCATGCAGAGAAATCTGAAAT 59.873 36.000 26.69 0.11 39.99 2.17
458 470 6.320418 ACATGCATGCAGAGAAATCTGAAATA 59.680 34.615 26.69 0.00 39.99 1.40
459 471 6.373186 TGCATGCAGAGAAATCTGAAATAG 57.627 37.500 18.46 0.00 39.99 1.73
460 472 5.884232 TGCATGCAGAGAAATCTGAAATAGT 59.116 36.000 18.46 0.00 39.99 2.12
461 473 7.049754 TGCATGCAGAGAAATCTGAAATAGTA 58.950 34.615 18.46 0.00 39.99 1.82
462 474 7.226128 TGCATGCAGAGAAATCTGAAATAGTAG 59.774 37.037 18.46 0.00 39.99 2.57
463 475 7.307870 GCATGCAGAGAAATCTGAAATAGTAGG 60.308 40.741 14.21 0.00 39.99 3.18
464 476 7.423844 TGCAGAGAAATCTGAAATAGTAGGA 57.576 36.000 9.38 0.00 39.99 2.94
465 477 7.851228 TGCAGAGAAATCTGAAATAGTAGGAA 58.149 34.615 9.38 0.00 39.99 3.36
466 478 8.321353 TGCAGAGAAATCTGAAATAGTAGGAAA 58.679 33.333 9.38 0.00 39.99 3.13
467 479 9.336171 GCAGAGAAATCTGAAATAGTAGGAAAT 57.664 33.333 9.38 0.00 39.99 2.17
478 490 9.958180 TGAAATAGTAGGAAATGTGAAATCTCA 57.042 29.630 0.00 0.00 0.00 3.27
490 502 5.793026 GTGAAATCTCACCAGTTGATCTC 57.207 43.478 0.00 0.00 45.41 2.75
491 503 5.486526 GTGAAATCTCACCAGTTGATCTCT 58.513 41.667 0.00 0.00 45.41 3.10
492 504 5.580297 GTGAAATCTCACCAGTTGATCTCTC 59.420 44.000 0.00 0.00 45.41 3.20
493 505 4.383850 AATCTCACCAGTTGATCTCTCG 57.616 45.455 0.00 0.00 32.17 4.04
494 506 1.474478 TCTCACCAGTTGATCTCTCGC 59.526 52.381 0.00 0.00 32.17 5.03
495 507 0.532573 TCACCAGTTGATCTCTCGCC 59.467 55.000 0.00 0.00 0.00 5.54
496 508 0.460987 CACCAGTTGATCTCTCGCCC 60.461 60.000 0.00 0.00 0.00 6.13
497 509 0.904865 ACCAGTTGATCTCTCGCCCA 60.905 55.000 0.00 0.00 0.00 5.36
498 510 0.250234 CCAGTTGATCTCTCGCCCAA 59.750 55.000 0.00 0.00 0.00 4.12
499 511 1.339055 CCAGTTGATCTCTCGCCCAAA 60.339 52.381 0.00 0.00 0.00 3.28
500 512 2.636830 CAGTTGATCTCTCGCCCAAAT 58.363 47.619 0.00 0.00 0.00 2.32
501 513 2.353889 CAGTTGATCTCTCGCCCAAATG 59.646 50.000 0.00 0.00 0.00 2.32
502 514 2.237143 AGTTGATCTCTCGCCCAAATGA 59.763 45.455 0.00 0.00 0.00 2.57
503 515 2.609427 TGATCTCTCGCCCAAATGAG 57.391 50.000 0.00 0.00 0.00 2.90
504 516 1.139654 TGATCTCTCGCCCAAATGAGG 59.860 52.381 0.00 0.00 33.00 3.86
505 517 1.414181 GATCTCTCGCCCAAATGAGGA 59.586 52.381 0.00 0.00 33.00 3.71
506 518 1.275666 TCTCTCGCCCAAATGAGGAA 58.724 50.000 0.00 0.00 33.00 3.36
507 519 1.066143 TCTCTCGCCCAAATGAGGAAC 60.066 52.381 0.00 0.00 33.00 3.62
508 520 0.035439 TCTCGCCCAAATGAGGAACC 60.035 55.000 0.00 0.00 33.00 3.62
509 521 0.322456 CTCGCCCAAATGAGGAACCA 60.322 55.000 0.00 0.00 0.00 3.67
510 522 0.331278 TCGCCCAAATGAGGAACCAT 59.669 50.000 0.00 0.00 0.00 3.55
511 523 0.457035 CGCCCAAATGAGGAACCATG 59.543 55.000 0.00 0.00 0.00 3.66
512 524 0.826062 GCCCAAATGAGGAACCATGG 59.174 55.000 11.19 11.19 0.00 3.66
513 525 1.619432 GCCCAAATGAGGAACCATGGA 60.619 52.381 21.47 0.00 0.00 3.41
514 526 2.818921 CCCAAATGAGGAACCATGGAA 58.181 47.619 21.47 0.00 0.00 3.53
515 527 2.762327 CCCAAATGAGGAACCATGGAAG 59.238 50.000 21.47 0.00 0.00 3.46
516 528 3.564133 CCCAAATGAGGAACCATGGAAGA 60.564 47.826 21.47 0.00 0.00 2.87
517 529 4.088634 CCAAATGAGGAACCATGGAAGAA 58.911 43.478 21.47 0.00 0.00 2.52
518 530 4.527816 CCAAATGAGGAACCATGGAAGAAA 59.472 41.667 21.47 0.00 0.00 2.52
519 531 5.011943 CCAAATGAGGAACCATGGAAGAAAA 59.988 40.000 21.47 0.00 0.00 2.29
520 532 5.990120 AATGAGGAACCATGGAAGAAAAG 57.010 39.130 21.47 0.00 0.00 2.27
521 533 3.766545 TGAGGAACCATGGAAGAAAAGG 58.233 45.455 21.47 0.00 0.00 3.11
522 534 3.092301 GAGGAACCATGGAAGAAAAGGG 58.908 50.000 21.47 0.00 0.00 3.95
523 535 2.179427 GGAACCATGGAAGAAAAGGGG 58.821 52.381 21.47 0.00 0.00 4.79
524 536 2.225267 GGAACCATGGAAGAAAAGGGGA 60.225 50.000 21.47 0.00 0.00 4.81
525 537 3.566553 GGAACCATGGAAGAAAAGGGGAT 60.567 47.826 21.47 0.00 0.00 3.85
526 538 4.325816 GGAACCATGGAAGAAAAGGGGATA 60.326 45.833 21.47 0.00 0.00 2.59
527 539 4.965283 ACCATGGAAGAAAAGGGGATAA 57.035 40.909 21.47 0.00 0.00 1.75
528 540 5.283876 ACCATGGAAGAAAAGGGGATAAA 57.716 39.130 21.47 0.00 0.00 1.40
529 541 5.023452 ACCATGGAAGAAAAGGGGATAAAC 58.977 41.667 21.47 0.00 0.00 2.01
530 542 5.022787 CCATGGAAGAAAAGGGGATAAACA 58.977 41.667 5.56 0.00 0.00 2.83
531 543 5.662657 CCATGGAAGAAAAGGGGATAAACAT 59.337 40.000 5.56 0.00 0.00 2.71
532 544 6.407299 CCATGGAAGAAAAGGGGATAAACATG 60.407 42.308 5.56 0.00 0.00 3.21
533 545 4.466015 TGGAAGAAAAGGGGATAAACATGC 59.534 41.667 0.00 0.00 0.00 4.06
534 546 4.466015 GGAAGAAAAGGGGATAAACATGCA 59.534 41.667 0.00 0.00 0.00 3.96
535 547 5.129320 GGAAGAAAAGGGGATAAACATGCAT 59.871 40.000 0.00 0.00 0.00 3.96
536 548 5.603170 AGAAAAGGGGATAAACATGCATG 57.397 39.130 25.09 25.09 0.00 4.06
537 549 5.271598 AGAAAAGGGGATAAACATGCATGA 58.728 37.500 32.75 11.53 0.00 3.07
538 550 5.901276 AGAAAAGGGGATAAACATGCATGAT 59.099 36.000 32.75 19.24 0.00 2.45
539 551 5.540400 AAAGGGGATAAACATGCATGATG 57.460 39.130 32.75 9.18 38.15 3.07
540 552 3.503365 AGGGGATAAACATGCATGATGG 58.497 45.455 32.75 6.97 36.23 3.51
541 553 3.140707 AGGGGATAAACATGCATGATGGA 59.859 43.478 32.75 13.43 36.23 3.41
542 554 4.091549 GGGGATAAACATGCATGATGGAT 58.908 43.478 32.75 17.43 36.23 3.41
565 577 4.443850 CAGTACGTGCTGCTTCATATTC 57.556 45.455 20.75 0.00 0.00 1.75
566 578 4.115516 CAGTACGTGCTGCTTCATATTCT 58.884 43.478 20.75 0.00 0.00 2.40
567 579 5.281727 CAGTACGTGCTGCTTCATATTCTA 58.718 41.667 20.75 0.00 0.00 2.10
568 580 5.923114 CAGTACGTGCTGCTTCATATTCTAT 59.077 40.000 20.75 0.00 0.00 1.98
569 581 6.422100 CAGTACGTGCTGCTTCATATTCTATT 59.578 38.462 20.75 0.00 0.00 1.73
570 582 7.595130 CAGTACGTGCTGCTTCATATTCTATTA 59.405 37.037 20.75 0.00 0.00 0.98
571 583 8.307483 AGTACGTGCTGCTTCATATTCTATTAT 58.693 33.333 4.99 0.00 0.00 1.28
572 584 7.356641 ACGTGCTGCTTCATATTCTATTATG 57.643 36.000 0.00 0.00 0.00 1.90
573 585 6.369890 ACGTGCTGCTTCATATTCTATTATGG 59.630 38.462 0.00 0.00 31.71 2.74
574 586 6.591448 CGTGCTGCTTCATATTCTATTATGGA 59.409 38.462 0.00 0.00 31.71 3.41
575 587 7.412346 CGTGCTGCTTCATATTCTATTATGGAC 60.412 40.741 0.00 0.00 31.71 4.02
576 588 6.881065 TGCTGCTTCATATTCTATTATGGACC 59.119 38.462 0.00 0.00 31.71 4.46
577 589 6.036517 GCTGCTTCATATTCTATTATGGACCG 59.963 42.308 0.00 0.00 31.71 4.79
578 590 6.406370 TGCTTCATATTCTATTATGGACCGG 58.594 40.000 0.00 0.00 31.71 5.28
579 591 5.294552 GCTTCATATTCTATTATGGACCGGC 59.705 44.000 0.00 0.00 31.71 6.13
580 592 6.367374 TTCATATTCTATTATGGACCGGCA 57.633 37.500 0.00 0.00 31.71 5.69
581 593 6.367374 TCATATTCTATTATGGACCGGCAA 57.633 37.500 0.00 0.00 31.71 4.52
582 594 6.170506 TCATATTCTATTATGGACCGGCAAC 58.829 40.000 0.00 0.00 31.71 4.17
583 595 3.916359 TTCTATTATGGACCGGCAACA 57.084 42.857 0.00 0.00 0.00 3.33
584 596 3.188159 TCTATTATGGACCGGCAACAC 57.812 47.619 0.00 0.00 0.00 3.32
585 597 2.502130 TCTATTATGGACCGGCAACACA 59.498 45.455 0.00 0.00 0.00 3.72
586 598 2.435372 ATTATGGACCGGCAACACAT 57.565 45.000 0.00 1.47 0.00 3.21
587 599 3.569194 ATTATGGACCGGCAACACATA 57.431 42.857 0.00 0.40 0.00 2.29
588 600 2.613026 TATGGACCGGCAACACATAG 57.387 50.000 0.00 0.00 0.00 2.23
589 601 0.908910 ATGGACCGGCAACACATAGA 59.091 50.000 0.00 0.00 0.00 1.98
590 602 0.687920 TGGACCGGCAACACATAGAA 59.312 50.000 0.00 0.00 0.00 2.10
591 603 1.280710 TGGACCGGCAACACATAGAAT 59.719 47.619 0.00 0.00 0.00 2.40
592 604 2.290641 TGGACCGGCAACACATAGAATT 60.291 45.455 0.00 0.00 0.00 2.17
593 605 3.055021 TGGACCGGCAACACATAGAATTA 60.055 43.478 0.00 0.00 0.00 1.40
594 606 4.134563 GGACCGGCAACACATAGAATTAT 58.865 43.478 0.00 0.00 0.00 1.28
595 607 4.578928 GGACCGGCAACACATAGAATTATT 59.421 41.667 0.00 0.00 0.00 1.40
596 608 5.067283 GGACCGGCAACACATAGAATTATTT 59.933 40.000 0.00 0.00 0.00 1.40
597 609 5.890334 ACCGGCAACACATAGAATTATTTG 58.110 37.500 0.00 0.00 0.00 2.32
598 610 5.417580 ACCGGCAACACATAGAATTATTTGT 59.582 36.000 0.00 0.00 32.86 2.83
599 611 5.743398 CCGGCAACACATAGAATTATTTGTG 59.257 40.000 18.30 18.30 43.88 3.33
600 612 5.743398 CGGCAACACATAGAATTATTTGTGG 59.257 40.000 22.09 10.51 42.86 4.17
601 613 6.404184 CGGCAACACATAGAATTATTTGTGGA 60.404 38.462 22.09 0.00 42.86 4.02
602 614 6.751888 GGCAACACATAGAATTATTTGTGGAC 59.248 38.462 22.09 13.22 42.86 4.02
603 615 7.362920 GGCAACACATAGAATTATTTGTGGACT 60.363 37.037 22.09 8.30 42.86 3.85
604 616 7.485913 GCAACACATAGAATTATTTGTGGACTG 59.514 37.037 22.09 17.24 42.86 3.51
605 617 7.630242 ACACATAGAATTATTTGTGGACTGG 57.370 36.000 22.09 2.85 42.86 4.00
606 618 6.603201 ACACATAGAATTATTTGTGGACTGGG 59.397 38.462 22.09 2.27 42.86 4.45
607 619 5.594317 ACATAGAATTATTTGTGGACTGGGC 59.406 40.000 0.00 0.00 0.00 5.36
608 620 4.322057 AGAATTATTTGTGGACTGGGCT 57.678 40.909 0.00 0.00 0.00 5.19
609 621 5.450818 AGAATTATTTGTGGACTGGGCTA 57.549 39.130 0.00 0.00 0.00 3.93
610 622 5.440610 AGAATTATTTGTGGACTGGGCTAG 58.559 41.667 0.00 0.00 0.00 3.42
611 623 3.644966 TTATTTGTGGACTGGGCTAGG 57.355 47.619 2.02 0.00 0.00 3.02
612 624 1.372501 ATTTGTGGACTGGGCTAGGT 58.627 50.000 2.02 0.00 0.00 3.08
613 625 2.032965 TTTGTGGACTGGGCTAGGTA 57.967 50.000 2.02 0.00 0.00 3.08
614 626 1.568504 TTGTGGACTGGGCTAGGTAG 58.431 55.000 2.02 0.00 0.00 3.18
628 640 2.959465 AGGTAGCATATGGGCCTTTC 57.041 50.000 4.53 0.00 0.00 2.62
629 641 2.135189 AGGTAGCATATGGGCCTTTCA 58.865 47.619 4.53 0.00 0.00 2.69
630 642 2.513738 AGGTAGCATATGGGCCTTTCAA 59.486 45.455 4.53 0.00 0.00 2.69
631 643 3.052944 AGGTAGCATATGGGCCTTTCAAA 60.053 43.478 4.53 0.00 0.00 2.69
632 644 3.897505 GGTAGCATATGGGCCTTTCAAAT 59.102 43.478 4.53 0.00 0.00 2.32
633 645 5.076873 GGTAGCATATGGGCCTTTCAAATA 58.923 41.667 4.53 0.00 0.00 1.40
634 646 5.538433 GGTAGCATATGGGCCTTTCAAATAA 59.462 40.000 4.53 0.00 0.00 1.40
635 647 5.535753 AGCATATGGGCCTTTCAAATAAC 57.464 39.130 4.53 0.00 0.00 1.89
636 648 5.211201 AGCATATGGGCCTTTCAAATAACT 58.789 37.500 4.53 0.00 0.00 2.24
637 649 6.372931 AGCATATGGGCCTTTCAAATAACTA 58.627 36.000 4.53 0.00 0.00 2.24
638 650 7.012607 AGCATATGGGCCTTTCAAATAACTAT 58.987 34.615 4.53 0.00 0.00 2.12
639 651 7.039504 AGCATATGGGCCTTTCAAATAACTATG 60.040 37.037 4.53 0.00 0.00 2.23
640 652 5.535753 ATGGGCCTTTCAAATAACTATGC 57.464 39.130 4.53 0.00 0.00 3.14
641 653 3.704061 TGGGCCTTTCAAATAACTATGCC 59.296 43.478 4.53 0.00 35.65 4.40
642 654 4.322080 GGCCTTTCAAATAACTATGCCC 57.678 45.455 0.00 0.00 0.00 5.36
643 655 3.960755 GGCCTTTCAAATAACTATGCCCT 59.039 43.478 0.00 0.00 0.00 5.19
644 656 4.038042 GGCCTTTCAAATAACTATGCCCTC 59.962 45.833 0.00 0.00 0.00 4.30
645 657 4.644685 GCCTTTCAAATAACTATGCCCTCA 59.355 41.667 0.00 0.00 0.00 3.86
646 658 5.302823 GCCTTTCAAATAACTATGCCCTCAT 59.697 40.000 0.00 0.00 36.73 2.90
647 659 6.490040 GCCTTTCAAATAACTATGCCCTCATA 59.510 38.462 0.00 0.00 34.22 2.15
648 660 7.014230 GCCTTTCAAATAACTATGCCCTCATAA 59.986 37.037 0.00 0.00 34.97 1.90
649 661 8.912988 CCTTTCAAATAACTATGCCCTCATAAA 58.087 33.333 0.00 0.00 34.97 1.40
652 664 9.474313 TTCAAATAACTATGCCCTCATAAAAGT 57.526 29.630 0.00 0.00 34.97 2.66
653 665 9.474313 TCAAATAACTATGCCCTCATAAAAGTT 57.526 29.630 0.00 0.00 34.97 2.66
656 668 9.474313 AATAACTATGCCCTCATAAAAGTTTGA 57.526 29.630 0.00 0.00 34.97 2.69
657 669 7.961326 AACTATGCCCTCATAAAAGTTTGAT 57.039 32.000 0.00 0.00 34.97 2.57
659 671 8.451908 ACTATGCCCTCATAAAAGTTTGATAC 57.548 34.615 0.00 0.00 34.97 2.24
660 672 8.052748 ACTATGCCCTCATAAAAGTTTGATACA 58.947 33.333 0.00 0.00 34.97 2.29
661 673 7.716799 ATGCCCTCATAAAAGTTTGATACAA 57.283 32.000 0.00 0.00 0.00 2.41
662 674 7.531857 TGCCCTCATAAAAGTTTGATACAAA 57.468 32.000 0.00 0.00 0.00 2.83
663 675 7.375053 TGCCCTCATAAAAGTTTGATACAAAC 58.625 34.615 16.36 16.36 0.00 2.93
664 676 7.014711 TGCCCTCATAAAAGTTTGATACAAACA 59.985 33.333 22.99 8.28 32.81 2.83
665 677 7.328493 GCCCTCATAAAAGTTTGATACAAACAC 59.672 37.037 22.99 4.66 32.81 3.32
666 678 8.576442 CCCTCATAAAAGTTTGATACAAACACT 58.424 33.333 22.99 11.25 32.81 3.55
667 679 9.398170 CCTCATAAAAGTTTGATACAAACACTG 57.602 33.333 22.99 14.40 32.81 3.66
668 680 8.795786 TCATAAAAGTTTGATACAAACACTGC 57.204 30.769 22.99 2.95 32.81 4.40
669 681 8.629158 TCATAAAAGTTTGATACAAACACTGCT 58.371 29.630 22.99 5.52 32.81 4.24
670 682 9.891828 CATAAAAGTTTGATACAAACACTGCTA 57.108 29.630 22.99 11.11 32.81 3.49
673 685 9.646427 AAAAGTTTGATACAAACACTGCTAAAA 57.354 25.926 22.99 0.00 32.81 1.52
674 686 9.646427 AAAGTTTGATACAAACACTGCTAAAAA 57.354 25.926 22.99 0.00 32.81 1.94
701 713 9.988815 ATTACATCTTTGACTGGTCTATACATC 57.011 33.333 2.38 0.00 0.00 3.06
702 714 7.667575 ACATCTTTGACTGGTCTATACATCT 57.332 36.000 2.38 0.00 0.00 2.90
703 715 8.083828 ACATCTTTGACTGGTCTATACATCTT 57.916 34.615 2.38 0.00 0.00 2.40
704 716 9.201989 ACATCTTTGACTGGTCTATACATCTTA 57.798 33.333 2.38 0.00 0.00 2.10
741 753 8.411318 TCTTTTTCAAACTCAGATTTTTCAGC 57.589 30.769 0.00 0.00 0.00 4.26
742 754 6.810888 TTTTCAAACTCAGATTTTTCAGCG 57.189 33.333 0.00 0.00 0.00 5.18
743 755 5.499139 TTCAAACTCAGATTTTTCAGCGT 57.501 34.783 0.00 0.00 0.00 5.07
744 756 4.847633 TCAAACTCAGATTTTTCAGCGTG 58.152 39.130 0.00 0.00 0.00 5.34
745 757 4.574421 TCAAACTCAGATTTTTCAGCGTGA 59.426 37.500 0.00 0.00 0.00 4.35
746 758 5.239306 TCAAACTCAGATTTTTCAGCGTGAT 59.761 36.000 0.00 0.00 0.00 3.06
747 759 6.426633 TCAAACTCAGATTTTTCAGCGTGATA 59.573 34.615 0.00 0.00 0.00 2.15
748 760 6.801539 AACTCAGATTTTTCAGCGTGATAA 57.198 33.333 0.00 0.00 0.00 1.75
749 761 6.170675 ACTCAGATTTTTCAGCGTGATAAC 57.829 37.500 0.00 0.00 0.00 1.89
750 762 5.122396 ACTCAGATTTTTCAGCGTGATAACC 59.878 40.000 0.00 0.00 0.00 2.85
751 763 5.000591 TCAGATTTTTCAGCGTGATAACCA 58.999 37.500 0.00 0.00 0.00 3.67
752 764 5.647658 TCAGATTTTTCAGCGTGATAACCAT 59.352 36.000 0.00 0.00 0.00 3.55
753 765 6.821160 TCAGATTTTTCAGCGTGATAACCATA 59.179 34.615 0.00 0.00 0.00 2.74
754 766 7.498900 TCAGATTTTTCAGCGTGATAACCATAT 59.501 33.333 0.00 0.00 0.00 1.78
755 767 8.131100 CAGATTTTTCAGCGTGATAACCATATT 58.869 33.333 0.00 0.00 0.00 1.28
756 768 8.686334 AGATTTTTCAGCGTGATAACCATATTT 58.314 29.630 0.00 0.00 0.00 1.40
757 769 9.301153 GATTTTTCAGCGTGATAACCATATTTT 57.699 29.630 0.00 0.00 0.00 1.82
758 770 8.682128 TTTTTCAGCGTGATAACCATATTTTC 57.318 30.769 0.00 0.00 0.00 2.29
759 771 6.993786 TTCAGCGTGATAACCATATTTTCA 57.006 33.333 0.00 0.00 0.00 2.69
760 772 6.993786 TCAGCGTGATAACCATATTTTCAA 57.006 33.333 0.00 0.00 0.00 2.69
761 773 6.781138 TCAGCGTGATAACCATATTTTCAAC 58.219 36.000 0.00 0.00 0.00 3.18
762 774 6.597672 TCAGCGTGATAACCATATTTTCAACT 59.402 34.615 0.00 0.00 0.00 3.16
763 775 7.766738 TCAGCGTGATAACCATATTTTCAACTA 59.233 33.333 0.00 0.00 0.00 2.24
764 776 8.394877 CAGCGTGATAACCATATTTTCAACTAA 58.605 33.333 0.00 0.00 0.00 2.24
765 777 8.952278 AGCGTGATAACCATATTTTCAACTAAA 58.048 29.630 0.00 0.00 0.00 1.85
766 778 9.562583 GCGTGATAACCATATTTTCAACTAAAA 57.437 29.630 0.00 0.00 41.21 1.52
788 800 7.961326 AAAAATGCCATCTAAACAGGTCTAT 57.039 32.000 0.00 0.00 0.00 1.98
790 802 8.451908 AAAATGCCATCTAAACAGGTCTATAC 57.548 34.615 0.00 0.00 0.00 1.47
791 803 6.747414 ATGCCATCTAAACAGGTCTATACA 57.253 37.500 0.00 0.00 0.00 2.29
792 804 6.747414 TGCCATCTAAACAGGTCTATACAT 57.253 37.500 0.00 0.00 0.00 2.29
793 805 7.136822 TGCCATCTAAACAGGTCTATACATT 57.863 36.000 0.00 0.00 0.00 2.71
794 806 7.573710 TGCCATCTAAACAGGTCTATACATTT 58.426 34.615 0.00 0.00 0.00 2.32
795 807 8.052748 TGCCATCTAAACAGGTCTATACATTTT 58.947 33.333 0.00 0.00 0.00 1.82
796 808 8.903820 GCCATCTAAACAGGTCTATACATTTTT 58.096 33.333 0.00 0.00 0.00 1.94
837 849 7.504924 TTTTCAAACTCGGATTTATCAGTGT 57.495 32.000 0.00 0.00 31.82 3.55
838 850 6.480524 TTCAAACTCGGATTTATCAGTGTG 57.519 37.500 0.00 0.00 31.16 3.82
839 851 5.789521 TCAAACTCGGATTTATCAGTGTGA 58.210 37.500 0.00 1.08 31.82 3.58
840 852 6.406370 TCAAACTCGGATTTATCAGTGTGAT 58.594 36.000 0.00 0.00 40.72 3.06
841 853 7.552459 TCAAACTCGGATTTATCAGTGTGATA 58.448 34.615 0.00 0.00 38.26 2.15
842 854 8.038351 TCAAACTCGGATTTATCAGTGTGATAA 58.962 33.333 5.44 5.44 44.82 1.75
877 889 8.795513 TCAATATAGCATGATTTAACACATGGG 58.204 33.333 17.23 0.00 42.53 4.00
878 890 8.795513 CAATATAGCATGATTTAACACATGGGA 58.204 33.333 0.00 0.00 42.53 4.37
879 891 9.537852 AATATAGCATGATTTAACACATGGGAT 57.462 29.630 0.00 0.00 42.53 3.85
880 892 7.844493 ATAGCATGATTTAACACATGGGATT 57.156 32.000 0.00 0.00 42.53 3.01
881 893 6.549433 AGCATGATTTAACACATGGGATTT 57.451 33.333 0.00 0.00 42.53 2.17
882 894 6.576185 AGCATGATTTAACACATGGGATTTC 58.424 36.000 0.00 0.00 42.53 2.17
883 895 6.381994 AGCATGATTTAACACATGGGATTTCT 59.618 34.615 0.00 6.85 42.53 2.52
884 896 7.560991 AGCATGATTTAACACATGGGATTTCTA 59.439 33.333 0.00 0.00 42.53 2.10
885 897 7.649306 GCATGATTTAACACATGGGATTTCTAC 59.351 37.037 0.00 0.00 42.53 2.59
886 898 8.906867 CATGATTTAACACATGGGATTTCTACT 58.093 33.333 0.00 0.00 39.79 2.57
891 903 9.967451 TTTAACACATGGGATTTCTACTATCAA 57.033 29.630 0.00 0.00 0.00 2.57
895 907 9.950496 ACACATGGGATTTCTACTATCAATATC 57.050 33.333 0.00 0.00 0.00 1.63
896 908 9.091784 CACATGGGATTTCTACTATCAATATCG 57.908 37.037 0.00 0.00 0.00 2.92
897 909 9.035890 ACATGGGATTTCTACTATCAATATCGA 57.964 33.333 0.00 0.00 0.00 3.59
898 910 9.875691 CATGGGATTTCTACTATCAATATCGAA 57.124 33.333 0.00 0.00 0.00 3.71
940 952 9.081997 TGAAATTATTTTTATCGACAACATGGC 57.918 29.630 0.00 0.00 0.00 4.40
941 953 9.301153 GAAATTATTTTTATCGACAACATGGCT 57.699 29.630 0.00 0.00 0.00 4.75
942 954 9.651913 AAATTATTTTTATCGACAACATGGCTT 57.348 25.926 0.00 0.00 0.00 4.35
943 955 9.651913 AATTATTTTTATCGACAACATGGCTTT 57.348 25.926 0.00 0.00 0.00 3.51
945 957 9.781834 TTATTTTTATCGACAACATGGCTTTAG 57.218 29.630 0.00 0.00 0.00 1.85
946 958 6.811253 TTTTATCGACAACATGGCTTTAGT 57.189 33.333 0.00 0.00 0.00 2.24
947 959 5.794687 TTATCGACAACATGGCTTTAGTG 57.205 39.130 0.00 0.00 0.00 2.74
948 960 2.422597 TCGACAACATGGCTTTAGTGG 58.577 47.619 0.00 0.00 0.00 4.00
949 961 1.468520 CGACAACATGGCTTTAGTGGG 59.531 52.381 0.00 0.00 0.00 4.61
950 962 2.514803 GACAACATGGCTTTAGTGGGT 58.485 47.619 0.00 0.00 0.00 4.51
951 963 2.488153 GACAACATGGCTTTAGTGGGTC 59.512 50.000 0.00 0.00 0.00 4.46
952 964 2.108250 ACAACATGGCTTTAGTGGGTCT 59.892 45.455 0.00 0.00 0.00 3.85
953 965 2.749621 CAACATGGCTTTAGTGGGTCTC 59.250 50.000 0.00 0.00 0.00 3.36
954 966 2.269940 ACATGGCTTTAGTGGGTCTCT 58.730 47.619 0.00 0.00 0.00 3.10
955 967 2.026822 ACATGGCTTTAGTGGGTCTCTG 60.027 50.000 0.00 0.00 0.00 3.35
956 968 0.324943 TGGCTTTAGTGGGTCTCTGC 59.675 55.000 0.00 0.00 0.00 4.26
957 969 0.741221 GGCTTTAGTGGGTCTCTGCG 60.741 60.000 0.00 0.00 0.00 5.18
958 970 1.362406 GCTTTAGTGGGTCTCTGCGC 61.362 60.000 0.00 0.00 0.00 6.09
959 971 0.247736 CTTTAGTGGGTCTCTGCGCT 59.752 55.000 9.73 0.00 0.00 5.92
960 972 1.476891 CTTTAGTGGGTCTCTGCGCTA 59.523 52.381 9.73 0.00 0.00 4.26
961 973 1.776662 TTAGTGGGTCTCTGCGCTAT 58.223 50.000 9.73 0.00 0.00 2.97
962 974 1.776662 TAGTGGGTCTCTGCGCTATT 58.223 50.000 9.73 0.00 0.00 1.73
963 975 0.905357 AGTGGGTCTCTGCGCTATTT 59.095 50.000 9.73 0.00 0.00 1.40
964 976 1.009829 GTGGGTCTCTGCGCTATTTG 58.990 55.000 9.73 0.00 0.00 2.32
965 977 0.107703 TGGGTCTCTGCGCTATTTGG 60.108 55.000 9.73 0.00 0.00 3.28
966 978 1.440145 GGGTCTCTGCGCTATTTGGC 61.440 60.000 9.73 0.00 0.00 4.52
974 986 2.102161 GCTATTTGGCGCAACGGG 59.898 61.111 10.83 0.00 0.00 5.28
975 987 2.696759 GCTATTTGGCGCAACGGGT 61.697 57.895 10.83 0.00 0.00 5.28
976 988 1.427819 CTATTTGGCGCAACGGGTC 59.572 57.895 10.83 0.00 0.00 4.46
977 989 1.302383 CTATTTGGCGCAACGGGTCA 61.302 55.000 10.83 0.00 0.00 4.02
978 990 0.889638 TATTTGGCGCAACGGGTCAA 60.890 50.000 10.83 0.00 38.26 3.18
979 991 2.414840 ATTTGGCGCAACGGGTCAAC 62.415 55.000 10.83 0.00 39.63 3.18
980 992 4.555709 TGGCGCAACGGGTCAACT 62.556 61.111 10.83 0.00 0.00 3.16
981 993 2.357760 GGCGCAACGGGTCAACTA 60.358 61.111 10.83 0.00 0.00 2.24
982 994 2.388232 GGCGCAACGGGTCAACTAG 61.388 63.158 10.83 0.00 0.00 2.57
983 995 1.666872 GCGCAACGGGTCAACTAGT 60.667 57.895 0.30 0.00 0.00 2.57
984 996 1.623973 GCGCAACGGGTCAACTAGTC 61.624 60.000 0.30 0.00 0.00 2.59
985 997 0.038526 CGCAACGGGTCAACTAGTCT 60.039 55.000 0.00 0.00 0.00 3.24
986 998 1.604693 CGCAACGGGTCAACTAGTCTT 60.605 52.381 0.00 0.00 0.00 3.01
987 999 2.490991 GCAACGGGTCAACTAGTCTTT 58.509 47.619 0.00 0.00 0.00 2.52
988 1000 3.656559 GCAACGGGTCAACTAGTCTTTA 58.343 45.455 0.00 0.00 0.00 1.85
989 1001 4.251268 GCAACGGGTCAACTAGTCTTTAT 58.749 43.478 0.00 0.00 0.00 1.40
990 1002 5.413499 GCAACGGGTCAACTAGTCTTTATA 58.587 41.667 0.00 0.00 0.00 0.98
1075 1087 2.965831 AGTGCTATTCCGAGGCTTATGA 59.034 45.455 0.00 0.00 0.00 2.15
1123 1135 3.563808 GCACATAAGGTATTGCAATCCGA 59.436 43.478 16.86 10.70 34.97 4.55
1292 1350 8.781951 TGATTATATGAGACCTTTTCCTTCCTT 58.218 33.333 0.00 0.00 0.00 3.36
1440 3202 7.628101 AGGTTTGGAGTCCCTAGATACTTAATT 59.372 37.037 6.74 0.00 0.00 1.40
1652 3416 7.580007 TGATGATGCATTATGGGCTTATAGAT 58.420 34.615 8.95 0.00 0.00 1.98
1698 3462 9.143155 GGGTATGTCTCCATATAAAATGGTTTT 57.857 33.333 4.06 0.00 40.06 2.43
1792 3556 3.949113 ACTTTAAACTTGCCGGTGAGAAA 59.051 39.130 1.90 0.00 0.00 2.52
1825 3589 6.408869 TGACATTAGCTCACTTGATGAATGA 58.591 36.000 6.99 0.00 36.69 2.57
1832 3596 4.436584 GCTCACTTGATGAATGAAGAACCG 60.437 45.833 0.00 0.00 36.69 4.44
1853 3617 1.212935 AGGCCTACGAGAATGCCAAAT 59.787 47.619 1.29 0.00 46.45 2.32
1987 3756 4.984146 ACTCCTATCTAAATGGGAAGGC 57.016 45.455 0.00 0.00 41.56 4.35
2080 3849 2.621526 GGTGGTGAACGGTCAAAGAATT 59.378 45.455 3.77 0.00 34.87 2.17
2190 3990 4.214332 AGAATGTTTCAGACTCCGAAAAGC 59.786 41.667 0.00 0.00 34.32 3.51
2301 4104 1.280457 AGAAGCAGACCGGAAAGGAT 58.720 50.000 9.46 0.00 45.00 3.24
2314 4117 2.104963 GGAAAGGATACGAGGCTTCCAT 59.895 50.000 5.78 0.00 46.39 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 8.404000 CCGTATGTAGTTTGTAGTGTAATCTCT 58.596 37.037 0.00 0.00 0.00 3.10
53 54 8.400947 TCCGTATGTAGTTTGTAGTGTAATCTC 58.599 37.037 0.00 0.00 0.00 2.75
54 55 8.284945 TCCGTATGTAGTTTGTAGTGTAATCT 57.715 34.615 0.00 0.00 0.00 2.40
55 56 8.965172 CATCCGTATGTAGTTTGTAGTGTAATC 58.035 37.037 0.00 0.00 0.00 1.75
56 57 8.472413 ACATCCGTATGTAGTTTGTAGTGTAAT 58.528 33.333 0.00 0.00 44.66 1.89
57 58 7.829725 ACATCCGTATGTAGTTTGTAGTGTAA 58.170 34.615 0.00 0.00 44.66 2.41
58 59 7.395190 ACATCCGTATGTAGTTTGTAGTGTA 57.605 36.000 0.00 0.00 44.66 2.90
59 60 6.276832 ACATCCGTATGTAGTTTGTAGTGT 57.723 37.500 0.00 0.00 44.66 3.55
101 102 5.446473 CCGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
102 103 4.631377 CCGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
103 104 4.631813 ACCGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
104 105 4.832248 ACCGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
105 106 3.679389 ACCGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
106 107 5.741388 ATACCGAGCAAAATGAGTGAATC 57.259 39.130 0.00 0.00 0.00 2.52
107 108 8.150945 ACTATATACCGAGCAAAATGAGTGAAT 58.849 33.333 0.00 0.00 0.00 2.57
108 109 7.497595 ACTATATACCGAGCAAAATGAGTGAA 58.502 34.615 0.00 0.00 0.00 3.18
109 110 7.050970 ACTATATACCGAGCAAAATGAGTGA 57.949 36.000 0.00 0.00 0.00 3.41
110 111 6.366332 GGACTATATACCGAGCAAAATGAGTG 59.634 42.308 0.00 0.00 0.00 3.51
111 112 6.456501 GGACTATATACCGAGCAAAATGAGT 58.543 40.000 0.00 0.00 0.00 3.41
112 113 6.952935 GGACTATATACCGAGCAAAATGAG 57.047 41.667 0.00 0.00 0.00 2.90
150 151 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
151 152 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
152 153 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
153 154 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
154 155 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
155 156 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
156 157 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
157 158 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
158 159 7.300658 AGTACTCCCTCCGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
159 160 6.856757 AGTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
160 161 5.713807 AGTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
161 162 5.134725 AGTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
162 163 3.991683 AGTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
163 164 3.463048 AGTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
164 165 3.245371 TGAAGTACTCCCTCCGTTCCTAA 60.245 47.826 0.00 0.00 0.00 2.69
165 166 2.309755 TGAAGTACTCCCTCCGTTCCTA 59.690 50.000 0.00 0.00 0.00 2.94
166 167 1.076677 TGAAGTACTCCCTCCGTTCCT 59.923 52.381 0.00 0.00 0.00 3.36
167 168 1.553706 TGAAGTACTCCCTCCGTTCC 58.446 55.000 0.00 0.00 0.00 3.62
168 169 4.796618 GCATATGAAGTACTCCCTCCGTTC 60.797 50.000 6.97 0.00 0.00 3.95
169 170 3.069729 GCATATGAAGTACTCCCTCCGTT 59.930 47.826 6.97 0.00 0.00 4.44
170 171 2.628657 GCATATGAAGTACTCCCTCCGT 59.371 50.000 6.97 0.00 0.00 4.69
171 172 2.028930 GGCATATGAAGTACTCCCTCCG 60.029 54.545 6.97 0.00 0.00 4.63
172 173 2.303311 GGGCATATGAAGTACTCCCTCC 59.697 54.545 6.97 0.00 0.00 4.30
173 174 2.972713 TGGGCATATGAAGTACTCCCTC 59.027 50.000 6.97 1.21 31.63 4.30
174 175 3.060479 TGGGCATATGAAGTACTCCCT 57.940 47.619 6.97 0.00 31.63 4.20
175 176 4.373156 AATGGGCATATGAAGTACTCCC 57.627 45.455 6.97 6.14 0.00 4.30
176 177 7.817418 TTAAAATGGGCATATGAAGTACTCC 57.183 36.000 6.97 0.00 0.00 3.85
177 178 8.135529 GGTTTAAAATGGGCATATGAAGTACTC 58.864 37.037 6.97 0.00 0.00 2.59
178 179 7.069455 GGGTTTAAAATGGGCATATGAAGTACT 59.931 37.037 6.97 0.00 0.00 2.73
179 180 7.147811 TGGGTTTAAAATGGGCATATGAAGTAC 60.148 37.037 6.97 0.00 0.00 2.73
184 185 5.362430 GTCTGGGTTTAAAATGGGCATATGA 59.638 40.000 6.97 0.00 0.00 2.15
221 222 8.239998 GGACTAAAATTCAGGAGAACAGAAATG 58.760 37.037 0.00 0.00 36.39 2.32
226 227 4.093556 GCGGACTAAAATTCAGGAGAACAG 59.906 45.833 0.00 0.00 36.39 3.16
284 296 4.259770 GCAAAACTGTGGTCGTTTTTCATG 60.260 41.667 0.00 0.00 41.24 3.07
301 313 3.743396 TGACCAAAACACAACAGCAAAAC 59.257 39.130 0.00 0.00 0.00 2.43
305 317 3.194329 TGATTGACCAAAACACAACAGCA 59.806 39.130 0.00 0.00 0.00 4.41
315 327 4.037327 TGAAACGCAGATGATTGACCAAAA 59.963 37.500 0.00 0.00 0.00 2.44
322 334 4.990257 AGGAATTGAAACGCAGATGATTG 58.010 39.130 0.00 0.00 0.00 2.67
327 339 4.832248 TCAGTAGGAATTGAAACGCAGAT 58.168 39.130 0.00 0.00 0.00 2.90
330 342 4.832248 AGATCAGTAGGAATTGAAACGCA 58.168 39.130 0.00 0.00 0.00 5.24
347 359 7.284820 TCAATTGCCAAATAGATGAGAGATCA 58.715 34.615 0.00 0.00 0.00 2.92
369 381 2.354729 CCCTTCGGGTGGCATCAA 59.645 61.111 0.00 0.00 38.25 2.57
380 392 4.659172 TGGGTTGGCAGCCCTTCG 62.659 66.667 35.08 0.00 46.22 3.79
382 394 2.203684 CTTGGGTTGGCAGCCCTT 60.204 61.111 35.08 0.00 46.22 3.95
393 405 1.975680 AGTACCGATGTTGTCTTGGGT 59.024 47.619 0.00 0.00 35.02 4.51
415 427 9.806203 CATGCATGTATTTTCTTTATTGAAGGA 57.194 29.630 18.91 0.00 35.98 3.36
416 428 8.545420 GCATGCATGTATTTTCTTTATTGAAGG 58.455 33.333 26.79 0.00 35.98 3.46
417 429 9.089601 TGCATGCATGTATTTTCTTTATTGAAG 57.910 29.630 26.79 0.00 36.67 3.02
418 430 8.999220 TGCATGCATGTATTTTCTTTATTGAA 57.001 26.923 26.79 0.00 0.00 2.69
419 431 8.468399 TCTGCATGCATGTATTTTCTTTATTGA 58.532 29.630 26.79 9.33 0.00 2.57
420 432 8.637281 TCTGCATGCATGTATTTTCTTTATTG 57.363 30.769 26.79 7.17 0.00 1.90
421 433 8.689061 TCTCTGCATGCATGTATTTTCTTTATT 58.311 29.630 26.79 0.00 0.00 1.40
422 434 8.229253 TCTCTGCATGCATGTATTTTCTTTAT 57.771 30.769 26.79 0.00 0.00 1.40
423 435 7.628769 TCTCTGCATGCATGTATTTTCTTTA 57.371 32.000 26.79 1.37 0.00 1.85
424 436 6.519679 TCTCTGCATGCATGTATTTTCTTT 57.480 33.333 26.79 0.00 0.00 2.52
425 437 6.519679 TTCTCTGCATGCATGTATTTTCTT 57.480 33.333 26.79 0.00 0.00 2.52
426 438 6.519679 TTTCTCTGCATGCATGTATTTTCT 57.480 33.333 26.79 0.00 0.00 2.52
427 439 7.167635 CAGATTTCTCTGCATGCATGTATTTTC 59.832 37.037 26.79 12.75 42.36 2.29
428 440 6.978659 CAGATTTCTCTGCATGCATGTATTTT 59.021 34.615 26.79 3.76 42.36 1.82
429 441 6.504398 CAGATTTCTCTGCATGCATGTATTT 58.496 36.000 26.79 5.39 42.36 1.40
430 442 6.073327 CAGATTTCTCTGCATGCATGTATT 57.927 37.500 26.79 4.83 42.36 1.89
431 443 5.690997 CAGATTTCTCTGCATGCATGTAT 57.309 39.130 26.79 13.93 42.36 2.29
452 464 9.958180 TGAGATTTCACATTTCCTACTATTTCA 57.042 29.630 0.00 0.00 0.00 2.69
469 481 5.623141 CGAGAGATCAACTGGTGAGATTTCA 60.623 44.000 0.44 0.00 40.43 2.69
470 482 4.803088 CGAGAGATCAACTGGTGAGATTTC 59.197 45.833 0.44 0.00 40.43 2.17
471 483 4.753233 CGAGAGATCAACTGGTGAGATTT 58.247 43.478 0.44 0.00 40.43 2.17
472 484 3.430098 GCGAGAGATCAACTGGTGAGATT 60.430 47.826 0.44 0.00 40.43 2.40
473 485 2.100584 GCGAGAGATCAACTGGTGAGAT 59.899 50.000 0.44 0.00 40.43 2.75
474 486 1.474478 GCGAGAGATCAACTGGTGAGA 59.526 52.381 0.44 0.00 40.43 3.27
475 487 1.470632 GGCGAGAGATCAACTGGTGAG 60.471 57.143 0.44 0.00 40.43 3.51
476 488 0.532573 GGCGAGAGATCAACTGGTGA 59.467 55.000 0.00 0.00 41.67 4.02
477 489 0.460987 GGGCGAGAGATCAACTGGTG 60.461 60.000 0.00 0.00 0.00 4.17
478 490 0.904865 TGGGCGAGAGATCAACTGGT 60.905 55.000 0.00 0.00 0.00 4.00
479 491 0.250234 TTGGGCGAGAGATCAACTGG 59.750 55.000 0.00 0.00 0.00 4.00
480 492 2.099141 TTTGGGCGAGAGATCAACTG 57.901 50.000 0.00 0.00 0.00 3.16
481 493 2.237143 TCATTTGGGCGAGAGATCAACT 59.763 45.455 0.00 0.00 0.00 3.16
482 494 2.611292 CTCATTTGGGCGAGAGATCAAC 59.389 50.000 0.00 0.00 0.00 3.18
483 495 2.420547 CCTCATTTGGGCGAGAGATCAA 60.421 50.000 0.00 0.00 0.00 2.57
484 496 1.139654 CCTCATTTGGGCGAGAGATCA 59.860 52.381 0.00 0.00 0.00 2.92
485 497 1.414181 TCCTCATTTGGGCGAGAGATC 59.586 52.381 0.00 0.00 0.00 2.75
486 498 1.500474 TCCTCATTTGGGCGAGAGAT 58.500 50.000 0.00 0.00 0.00 2.75
487 499 1.066143 GTTCCTCATTTGGGCGAGAGA 60.066 52.381 0.00 0.00 0.00 3.10
488 500 1.373570 GTTCCTCATTTGGGCGAGAG 58.626 55.000 0.00 0.00 0.00 3.20
489 501 0.035439 GGTTCCTCATTTGGGCGAGA 60.035 55.000 0.00 0.00 0.00 4.04
490 502 0.322456 TGGTTCCTCATTTGGGCGAG 60.322 55.000 0.00 0.00 0.00 5.03
491 503 0.331278 ATGGTTCCTCATTTGGGCGA 59.669 50.000 0.00 0.00 0.00 5.54
492 504 0.457035 CATGGTTCCTCATTTGGGCG 59.543 55.000 0.00 0.00 0.00 6.13
493 505 0.826062 CCATGGTTCCTCATTTGGGC 59.174 55.000 2.57 0.00 0.00 5.36
494 506 2.530460 TCCATGGTTCCTCATTTGGG 57.470 50.000 12.58 0.00 0.00 4.12
495 507 3.700538 TCTTCCATGGTTCCTCATTTGG 58.299 45.455 12.58 0.00 0.00 3.28
496 508 5.726980 TTTCTTCCATGGTTCCTCATTTG 57.273 39.130 12.58 0.00 0.00 2.32
497 509 5.246883 CCTTTTCTTCCATGGTTCCTCATTT 59.753 40.000 12.58 0.00 0.00 2.32
498 510 4.774200 CCTTTTCTTCCATGGTTCCTCATT 59.226 41.667 12.58 0.00 0.00 2.57
499 511 4.347607 CCTTTTCTTCCATGGTTCCTCAT 58.652 43.478 12.58 0.00 0.00 2.90
500 512 3.500289 CCCTTTTCTTCCATGGTTCCTCA 60.500 47.826 12.58 0.00 0.00 3.86
501 513 3.092301 CCCTTTTCTTCCATGGTTCCTC 58.908 50.000 12.58 0.00 0.00 3.71
502 514 2.225369 CCCCTTTTCTTCCATGGTTCCT 60.225 50.000 12.58 0.00 0.00 3.36
503 515 2.179427 CCCCTTTTCTTCCATGGTTCC 58.821 52.381 12.58 0.00 0.00 3.62
504 516 3.169512 TCCCCTTTTCTTCCATGGTTC 57.830 47.619 12.58 0.00 0.00 3.62
505 517 3.852858 ATCCCCTTTTCTTCCATGGTT 57.147 42.857 12.58 0.00 0.00 3.67
506 518 4.965283 TTATCCCCTTTTCTTCCATGGT 57.035 40.909 12.58 0.00 0.00 3.55
507 519 5.022787 TGTTTATCCCCTTTTCTTCCATGG 58.977 41.667 4.97 4.97 0.00 3.66
508 520 6.576185 CATGTTTATCCCCTTTTCTTCCATG 58.424 40.000 0.00 0.00 0.00 3.66
509 521 5.129320 GCATGTTTATCCCCTTTTCTTCCAT 59.871 40.000 0.00 0.00 0.00 3.41
510 522 4.466015 GCATGTTTATCCCCTTTTCTTCCA 59.534 41.667 0.00 0.00 0.00 3.53
511 523 4.466015 TGCATGTTTATCCCCTTTTCTTCC 59.534 41.667 0.00 0.00 0.00 3.46
512 524 5.659440 TGCATGTTTATCCCCTTTTCTTC 57.341 39.130 0.00 0.00 0.00 2.87
513 525 5.721000 TCATGCATGTTTATCCCCTTTTCTT 59.279 36.000 25.43 0.00 0.00 2.52
514 526 5.271598 TCATGCATGTTTATCCCCTTTTCT 58.728 37.500 25.43 0.00 0.00 2.52
515 527 5.596836 TCATGCATGTTTATCCCCTTTTC 57.403 39.130 25.43 0.00 0.00 2.29
516 528 5.163280 CCATCATGCATGTTTATCCCCTTTT 60.163 40.000 25.43 0.00 0.00 2.27
517 529 4.345837 CCATCATGCATGTTTATCCCCTTT 59.654 41.667 25.43 0.00 0.00 3.11
518 530 3.899360 CCATCATGCATGTTTATCCCCTT 59.101 43.478 25.43 0.00 0.00 3.95
519 531 3.140707 TCCATCATGCATGTTTATCCCCT 59.859 43.478 25.43 0.00 0.00 4.79
520 532 3.499338 TCCATCATGCATGTTTATCCCC 58.501 45.455 25.43 0.00 0.00 4.81
521 533 5.068234 CATCCATCATGCATGTTTATCCC 57.932 43.478 25.43 0.00 0.00 3.85
533 545 1.262417 GCACGTACTGCATCCATCATG 59.738 52.381 11.05 0.00 46.29 3.07
534 546 1.586422 GCACGTACTGCATCCATCAT 58.414 50.000 11.05 0.00 46.29 2.45
535 547 3.064079 GCACGTACTGCATCCATCA 57.936 52.632 11.05 0.00 46.29 3.07
544 556 4.115516 AGAATATGAAGCAGCACGTACTG 58.884 43.478 11.62 11.62 40.80 2.74
545 557 4.392921 AGAATATGAAGCAGCACGTACT 57.607 40.909 0.00 0.00 0.00 2.73
546 558 6.771188 AATAGAATATGAAGCAGCACGTAC 57.229 37.500 0.00 0.00 0.00 3.67
547 559 7.545615 CCATAATAGAATATGAAGCAGCACGTA 59.454 37.037 0.00 0.00 35.69 3.57
548 560 6.369890 CCATAATAGAATATGAAGCAGCACGT 59.630 38.462 0.00 0.00 35.69 4.49
549 561 6.591448 TCCATAATAGAATATGAAGCAGCACG 59.409 38.462 0.00 0.00 35.69 5.34
550 562 7.148340 GGTCCATAATAGAATATGAAGCAGCAC 60.148 40.741 0.00 0.00 35.69 4.40
551 563 6.881065 GGTCCATAATAGAATATGAAGCAGCA 59.119 38.462 0.00 0.00 35.69 4.41
552 564 6.036517 CGGTCCATAATAGAATATGAAGCAGC 59.963 42.308 0.00 0.00 35.69 5.25
553 565 6.536582 CCGGTCCATAATAGAATATGAAGCAG 59.463 42.308 0.00 0.00 35.69 4.24
554 566 6.406370 CCGGTCCATAATAGAATATGAAGCA 58.594 40.000 0.00 0.00 35.69 3.91
555 567 5.294552 GCCGGTCCATAATAGAATATGAAGC 59.705 44.000 1.90 0.00 35.69 3.86
556 568 6.406370 TGCCGGTCCATAATAGAATATGAAG 58.594 40.000 1.90 0.00 35.69 3.02
557 569 6.367374 TGCCGGTCCATAATAGAATATGAA 57.633 37.500 1.90 0.00 35.69 2.57
558 570 6.170506 GTTGCCGGTCCATAATAGAATATGA 58.829 40.000 1.90 0.00 35.69 2.15
559 571 5.937540 TGTTGCCGGTCCATAATAGAATATG 59.062 40.000 1.90 0.00 33.85 1.78
560 572 5.938125 GTGTTGCCGGTCCATAATAGAATAT 59.062 40.000 1.90 0.00 0.00 1.28
561 573 5.163290 TGTGTTGCCGGTCCATAATAGAATA 60.163 40.000 1.90 0.00 0.00 1.75
562 574 4.134563 GTGTTGCCGGTCCATAATAGAAT 58.865 43.478 1.90 0.00 0.00 2.40
563 575 3.055021 TGTGTTGCCGGTCCATAATAGAA 60.055 43.478 1.90 0.00 0.00 2.10
564 576 2.502130 TGTGTTGCCGGTCCATAATAGA 59.498 45.455 1.90 0.00 0.00 1.98
565 577 2.912771 TGTGTTGCCGGTCCATAATAG 58.087 47.619 1.90 0.00 0.00 1.73
566 578 3.569194 ATGTGTTGCCGGTCCATAATA 57.431 42.857 1.90 0.00 0.00 0.98
567 579 2.435372 ATGTGTTGCCGGTCCATAAT 57.565 45.000 1.90 0.00 0.00 1.28
568 580 2.502130 TCTATGTGTTGCCGGTCCATAA 59.498 45.455 1.90 0.00 0.00 1.90
569 581 2.112190 TCTATGTGTTGCCGGTCCATA 58.888 47.619 1.90 2.22 0.00 2.74
570 582 0.908910 TCTATGTGTTGCCGGTCCAT 59.091 50.000 1.90 1.04 0.00 3.41
571 583 0.687920 TTCTATGTGTTGCCGGTCCA 59.312 50.000 1.90 0.00 0.00 4.02
572 584 2.038387 ATTCTATGTGTTGCCGGTCC 57.962 50.000 1.90 0.00 0.00 4.46
573 585 5.751243 AATAATTCTATGTGTTGCCGGTC 57.249 39.130 1.90 0.00 0.00 4.79
574 586 5.417580 ACAAATAATTCTATGTGTTGCCGGT 59.582 36.000 1.90 0.00 32.84 5.28
575 587 5.743398 CACAAATAATTCTATGTGTTGCCGG 59.257 40.000 0.00 0.00 34.26 6.13
576 588 5.743398 CCACAAATAATTCTATGTGTTGCCG 59.257 40.000 13.25 0.00 41.14 5.69
577 589 6.751888 GTCCACAAATAATTCTATGTGTTGCC 59.248 38.462 13.25 0.31 41.14 4.52
578 590 7.485913 CAGTCCACAAATAATTCTATGTGTTGC 59.514 37.037 13.25 6.13 41.14 4.17
579 591 7.970061 CCAGTCCACAAATAATTCTATGTGTTG 59.030 37.037 13.25 9.65 41.14 3.33
580 592 7.122650 CCCAGTCCACAAATAATTCTATGTGTT 59.877 37.037 13.25 1.28 41.14 3.32
581 593 6.603201 CCCAGTCCACAAATAATTCTATGTGT 59.397 38.462 13.25 0.00 41.14 3.72
582 594 6.460123 GCCCAGTCCACAAATAATTCTATGTG 60.460 42.308 9.34 9.34 42.10 3.21
583 595 5.594317 GCCCAGTCCACAAATAATTCTATGT 59.406 40.000 0.00 0.00 0.00 2.29
584 596 5.829924 AGCCCAGTCCACAAATAATTCTATG 59.170 40.000 0.00 0.00 0.00 2.23
585 597 6.018433 AGCCCAGTCCACAAATAATTCTAT 57.982 37.500 0.00 0.00 0.00 1.98
586 598 5.450818 AGCCCAGTCCACAAATAATTCTA 57.549 39.130 0.00 0.00 0.00 2.10
587 599 4.322057 AGCCCAGTCCACAAATAATTCT 57.678 40.909 0.00 0.00 0.00 2.40
588 600 4.580580 CCTAGCCCAGTCCACAAATAATTC 59.419 45.833 0.00 0.00 0.00 2.17
589 601 4.017499 ACCTAGCCCAGTCCACAAATAATT 60.017 41.667 0.00 0.00 0.00 1.40
590 602 3.527665 ACCTAGCCCAGTCCACAAATAAT 59.472 43.478 0.00 0.00 0.00 1.28
591 603 2.916934 ACCTAGCCCAGTCCACAAATAA 59.083 45.455 0.00 0.00 0.00 1.40
592 604 2.557869 ACCTAGCCCAGTCCACAAATA 58.442 47.619 0.00 0.00 0.00 1.40
593 605 1.372501 ACCTAGCCCAGTCCACAAAT 58.627 50.000 0.00 0.00 0.00 2.32
594 606 1.906574 CTACCTAGCCCAGTCCACAAA 59.093 52.381 0.00 0.00 0.00 2.83
595 607 1.568504 CTACCTAGCCCAGTCCACAA 58.431 55.000 0.00 0.00 0.00 3.33
596 608 0.976073 GCTACCTAGCCCAGTCCACA 60.976 60.000 0.00 0.00 43.39 4.17
597 609 1.823976 GCTACCTAGCCCAGTCCAC 59.176 63.158 0.00 0.00 43.39 4.02
598 610 4.375406 GCTACCTAGCCCAGTCCA 57.625 61.111 0.00 0.00 43.39 4.02
607 619 3.327757 TGAAAGGCCCATATGCTACCTAG 59.672 47.826 0.00 0.00 0.00 3.02
608 620 3.322862 TGAAAGGCCCATATGCTACCTA 58.677 45.455 0.00 0.00 0.00 3.08
609 621 2.135189 TGAAAGGCCCATATGCTACCT 58.865 47.619 0.00 0.31 0.00 3.08
610 622 2.656947 TGAAAGGCCCATATGCTACC 57.343 50.000 0.00 0.00 0.00 3.18
611 623 6.265422 AGTTATTTGAAAGGCCCATATGCTAC 59.735 38.462 0.00 0.00 0.00 3.58
612 624 6.372931 AGTTATTTGAAAGGCCCATATGCTA 58.627 36.000 0.00 0.00 0.00 3.49
613 625 5.211201 AGTTATTTGAAAGGCCCATATGCT 58.789 37.500 0.00 0.00 0.00 3.79
614 626 5.535753 AGTTATTTGAAAGGCCCATATGC 57.464 39.130 0.00 0.00 0.00 3.14
615 627 7.092716 GCATAGTTATTTGAAAGGCCCATATG 58.907 38.462 0.00 0.00 0.00 1.78
616 628 6.211384 GGCATAGTTATTTGAAAGGCCCATAT 59.789 38.462 0.00 0.00 32.89 1.78
617 629 5.538433 GGCATAGTTATTTGAAAGGCCCATA 59.462 40.000 0.00 0.00 32.89 2.74
618 630 4.344968 GGCATAGTTATTTGAAAGGCCCAT 59.655 41.667 0.00 0.00 32.89 4.00
619 631 3.704061 GGCATAGTTATTTGAAAGGCCCA 59.296 43.478 0.00 0.00 32.89 5.36
620 632 4.322080 GGCATAGTTATTTGAAAGGCCC 57.678 45.455 0.00 0.00 32.89 5.80
621 633 3.960755 AGGGCATAGTTATTTGAAAGGCC 59.039 43.478 0.00 0.00 40.38 5.19
622 634 4.644685 TGAGGGCATAGTTATTTGAAAGGC 59.355 41.667 0.00 0.00 0.00 4.35
623 635 6.966534 ATGAGGGCATAGTTATTTGAAAGG 57.033 37.500 0.00 0.00 31.57 3.11
626 638 9.474313 ACTTTTATGAGGGCATAGTTATTTGAA 57.526 29.630 0.00 0.00 38.19 2.69
627 639 9.474313 AACTTTTATGAGGGCATAGTTATTTGA 57.526 29.630 0.00 0.00 38.19 2.69
630 642 9.474313 TCAAACTTTTATGAGGGCATAGTTATT 57.526 29.630 0.00 0.00 38.19 1.40
631 643 9.646522 ATCAAACTTTTATGAGGGCATAGTTAT 57.353 29.630 0.00 0.00 38.19 1.89
633 645 7.961326 ATCAAACTTTTATGAGGGCATAGTT 57.039 32.000 0.00 0.00 38.19 2.24
634 646 8.052748 TGTATCAAACTTTTATGAGGGCATAGT 58.947 33.333 0.00 0.00 38.19 2.12
635 647 8.450578 TGTATCAAACTTTTATGAGGGCATAG 57.549 34.615 0.00 0.00 38.19 2.23
636 648 8.815565 TTGTATCAAACTTTTATGAGGGCATA 57.184 30.769 0.00 0.00 35.94 3.14
637 649 7.716799 TTGTATCAAACTTTTATGAGGGCAT 57.283 32.000 0.00 0.00 38.54 4.40
638 650 7.014711 TGTTTGTATCAAACTTTTATGAGGGCA 59.985 33.333 20.66 0.19 0.00 5.36
639 651 7.328493 GTGTTTGTATCAAACTTTTATGAGGGC 59.672 37.037 20.66 0.00 0.00 5.19
640 652 8.576442 AGTGTTTGTATCAAACTTTTATGAGGG 58.424 33.333 20.66 0.00 0.00 4.30
641 653 9.398170 CAGTGTTTGTATCAAACTTTTATGAGG 57.602 33.333 20.66 3.40 0.00 3.86
642 654 8.905702 GCAGTGTTTGTATCAAACTTTTATGAG 58.094 33.333 20.66 8.00 0.00 2.90
643 655 8.629158 AGCAGTGTTTGTATCAAACTTTTATGA 58.371 29.630 20.66 2.40 0.00 2.15
644 656 8.801715 AGCAGTGTTTGTATCAAACTTTTATG 57.198 30.769 20.66 14.21 0.00 1.90
647 659 9.646427 TTTTAGCAGTGTTTGTATCAAACTTTT 57.354 25.926 20.66 8.22 0.00 2.27
648 660 9.646427 TTTTTAGCAGTGTTTGTATCAAACTTT 57.354 25.926 20.66 10.07 0.00 2.66
675 687 9.988815 GATGTATAGACCAGTCAAAGATGTAAT 57.011 33.333 0.00 0.00 0.00 1.89
676 688 9.201989 AGATGTATAGACCAGTCAAAGATGTAA 57.798 33.333 0.00 0.00 0.00 2.41
677 689 8.768501 AGATGTATAGACCAGTCAAAGATGTA 57.231 34.615 0.00 0.00 0.00 2.29
678 690 7.667575 AGATGTATAGACCAGTCAAAGATGT 57.332 36.000 0.00 0.00 0.00 3.06
715 727 8.872845 GCTGAAAAATCTGAGTTTGAAAAAGAA 58.127 29.630 3.65 0.00 0.00 2.52
716 728 7.220683 CGCTGAAAAATCTGAGTTTGAAAAAGA 59.779 33.333 3.65 0.00 0.00 2.52
717 729 7.009540 ACGCTGAAAAATCTGAGTTTGAAAAAG 59.990 33.333 3.65 0.23 0.00 2.27
718 730 6.811170 ACGCTGAAAAATCTGAGTTTGAAAAA 59.189 30.769 3.65 0.00 0.00 1.94
719 731 6.253298 CACGCTGAAAAATCTGAGTTTGAAAA 59.747 34.615 3.65 0.00 0.00 2.29
720 732 5.743398 CACGCTGAAAAATCTGAGTTTGAAA 59.257 36.000 3.65 0.00 0.00 2.69
721 733 5.065859 TCACGCTGAAAAATCTGAGTTTGAA 59.934 36.000 3.65 0.00 0.00 2.69
722 734 4.574421 TCACGCTGAAAAATCTGAGTTTGA 59.426 37.500 3.65 0.00 0.00 2.69
723 735 4.847633 TCACGCTGAAAAATCTGAGTTTG 58.152 39.130 3.65 0.00 0.00 2.93
724 736 5.695851 ATCACGCTGAAAAATCTGAGTTT 57.304 34.783 0.00 0.00 0.00 2.66
725 737 6.348540 GGTTATCACGCTGAAAAATCTGAGTT 60.349 38.462 0.00 0.00 0.00 3.01
726 738 5.122396 GGTTATCACGCTGAAAAATCTGAGT 59.878 40.000 0.00 0.00 0.00 3.41
727 739 5.122239 TGGTTATCACGCTGAAAAATCTGAG 59.878 40.000 0.00 0.00 0.00 3.35
728 740 5.000591 TGGTTATCACGCTGAAAAATCTGA 58.999 37.500 0.00 0.00 0.00 3.27
729 741 5.295431 TGGTTATCACGCTGAAAAATCTG 57.705 39.130 0.00 0.00 0.00 2.90
730 742 7.807977 ATATGGTTATCACGCTGAAAAATCT 57.192 32.000 0.00 0.00 0.00 2.40
731 743 8.856490 AAATATGGTTATCACGCTGAAAAATC 57.144 30.769 0.00 0.00 0.00 2.17
732 744 9.301153 GAAAATATGGTTATCACGCTGAAAAAT 57.699 29.630 0.00 0.00 0.00 1.82
733 745 8.300286 TGAAAATATGGTTATCACGCTGAAAAA 58.700 29.630 0.00 0.00 0.00 1.94
734 746 7.821652 TGAAAATATGGTTATCACGCTGAAAA 58.178 30.769 0.00 0.00 0.00 2.29
735 747 7.384439 TGAAAATATGGTTATCACGCTGAAA 57.616 32.000 0.00 0.00 0.00 2.69
736 748 6.993786 TGAAAATATGGTTATCACGCTGAA 57.006 33.333 0.00 0.00 0.00 3.02
737 749 6.597672 AGTTGAAAATATGGTTATCACGCTGA 59.402 34.615 0.00 0.00 0.00 4.26
738 750 6.785191 AGTTGAAAATATGGTTATCACGCTG 58.215 36.000 0.00 0.00 0.00 5.18
739 751 8.500753 TTAGTTGAAAATATGGTTATCACGCT 57.499 30.769 0.00 0.00 0.00 5.07
740 752 9.562583 TTTTAGTTGAAAATATGGTTATCACGC 57.437 29.630 0.00 0.00 31.90 5.34
764 776 7.961326 ATAGACCTGTTTAGATGGCATTTTT 57.039 32.000 0.00 0.00 0.00 1.94
765 777 8.052748 TGTATAGACCTGTTTAGATGGCATTTT 58.947 33.333 0.00 0.00 0.00 1.82
766 778 7.573710 TGTATAGACCTGTTTAGATGGCATTT 58.426 34.615 0.00 0.00 0.00 2.32
767 779 7.136822 TGTATAGACCTGTTTAGATGGCATT 57.863 36.000 0.00 0.00 0.00 3.56
768 780 6.747414 TGTATAGACCTGTTTAGATGGCAT 57.253 37.500 0.00 0.00 0.00 4.40
769 781 6.747414 ATGTATAGACCTGTTTAGATGGCA 57.253 37.500 0.00 0.00 0.00 4.92
770 782 8.451908 AAAATGTATAGACCTGTTTAGATGGC 57.548 34.615 0.00 0.00 0.00 4.40
812 824 7.860373 CACACTGATAAATCCGAGTTTGAAAAA 59.140 33.333 0.00 0.00 0.00 1.94
813 825 7.227711 TCACACTGATAAATCCGAGTTTGAAAA 59.772 33.333 0.00 0.00 0.00 2.29
814 826 6.708502 TCACACTGATAAATCCGAGTTTGAAA 59.291 34.615 0.00 0.00 0.00 2.69
815 827 6.227522 TCACACTGATAAATCCGAGTTTGAA 58.772 36.000 0.00 0.00 0.00 2.69
816 828 5.789521 TCACACTGATAAATCCGAGTTTGA 58.210 37.500 0.00 0.00 0.00 2.69
817 829 6.668541 ATCACACTGATAAATCCGAGTTTG 57.331 37.500 0.00 0.00 34.88 2.93
851 863 8.795513 CCCATGTGTTAAATCATGCTATATTGA 58.204 33.333 12.74 0.00 39.74 2.57
852 864 8.795513 TCCCATGTGTTAAATCATGCTATATTG 58.204 33.333 12.74 0.00 39.74 1.90
853 865 8.938801 TCCCATGTGTTAAATCATGCTATATT 57.061 30.769 12.74 0.00 39.74 1.28
854 866 9.537852 AATCCCATGTGTTAAATCATGCTATAT 57.462 29.630 12.74 0.00 39.74 0.86
855 867 8.938801 AATCCCATGTGTTAAATCATGCTATA 57.061 30.769 12.74 2.69 39.74 1.31
856 868 7.844493 AATCCCATGTGTTAAATCATGCTAT 57.156 32.000 12.74 7.55 39.74 2.97
857 869 7.560991 AGAAATCCCATGTGTTAAATCATGCTA 59.439 33.333 12.74 6.12 39.74 3.49
858 870 6.381994 AGAAATCCCATGTGTTAAATCATGCT 59.618 34.615 12.74 4.40 39.74 3.79
859 871 6.576185 AGAAATCCCATGTGTTAAATCATGC 58.424 36.000 12.74 2.78 39.74 4.06
860 872 8.906867 AGTAGAAATCCCATGTGTTAAATCATG 58.093 33.333 11.75 11.75 40.46 3.07
865 877 9.967451 TTGATAGTAGAAATCCCATGTGTTAAA 57.033 29.630 0.00 0.00 0.00 1.52
869 881 9.950496 GATATTGATAGTAGAAATCCCATGTGT 57.050 33.333 0.00 0.00 0.00 3.72
870 882 9.091784 CGATATTGATAGTAGAAATCCCATGTG 57.908 37.037 0.00 0.00 0.00 3.21
871 883 9.035890 TCGATATTGATAGTAGAAATCCCATGT 57.964 33.333 0.00 0.00 0.00 3.21
872 884 9.875691 TTCGATATTGATAGTAGAAATCCCATG 57.124 33.333 0.00 0.00 0.00 3.66
914 926 9.081997 GCCATGTTGTCGATAAAAATAATTTCA 57.918 29.630 0.00 0.00 0.00 2.69
915 927 9.301153 AGCCATGTTGTCGATAAAAATAATTTC 57.699 29.630 0.00 0.00 0.00 2.17
916 928 9.651913 AAGCCATGTTGTCGATAAAAATAATTT 57.348 25.926 0.00 0.00 0.00 1.82
917 929 9.651913 AAAGCCATGTTGTCGATAAAAATAATT 57.348 25.926 0.00 0.00 0.00 1.40
919 931 9.781834 CTAAAGCCATGTTGTCGATAAAAATAA 57.218 29.630 0.00 0.00 0.00 1.40
920 932 8.952278 ACTAAAGCCATGTTGTCGATAAAAATA 58.048 29.630 0.00 0.00 0.00 1.40
921 933 7.754924 CACTAAAGCCATGTTGTCGATAAAAAT 59.245 33.333 0.00 0.00 0.00 1.82
922 934 7.081349 CACTAAAGCCATGTTGTCGATAAAAA 58.919 34.615 0.00 0.00 0.00 1.94
923 935 6.348950 CCACTAAAGCCATGTTGTCGATAAAA 60.349 38.462 0.00 0.00 0.00 1.52
924 936 5.123186 CCACTAAAGCCATGTTGTCGATAAA 59.877 40.000 0.00 0.00 0.00 1.40
925 937 4.634004 CCACTAAAGCCATGTTGTCGATAA 59.366 41.667 0.00 0.00 0.00 1.75
926 938 4.188462 CCACTAAAGCCATGTTGTCGATA 58.812 43.478 0.00 0.00 0.00 2.92
927 939 3.009723 CCACTAAAGCCATGTTGTCGAT 58.990 45.455 0.00 0.00 0.00 3.59
928 940 2.422597 CCACTAAAGCCATGTTGTCGA 58.577 47.619 0.00 0.00 0.00 4.20
929 941 1.468520 CCCACTAAAGCCATGTTGTCG 59.531 52.381 0.00 0.00 0.00 4.35
930 942 2.488153 GACCCACTAAAGCCATGTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
931 943 2.108250 AGACCCACTAAAGCCATGTTGT 59.892 45.455 0.00 0.00 0.00 3.32
932 944 2.749621 GAGACCCACTAAAGCCATGTTG 59.250 50.000 0.00 0.00 0.00 3.33
933 945 2.644798 AGAGACCCACTAAAGCCATGTT 59.355 45.455 0.00 0.00 0.00 2.71
934 946 2.026822 CAGAGACCCACTAAAGCCATGT 60.027 50.000 0.00 0.00 0.00 3.21
935 947 2.636830 CAGAGACCCACTAAAGCCATG 58.363 52.381 0.00 0.00 0.00 3.66
936 948 1.065126 GCAGAGACCCACTAAAGCCAT 60.065 52.381 0.00 0.00 0.00 4.40
937 949 0.324943 GCAGAGACCCACTAAAGCCA 59.675 55.000 0.00 0.00 0.00 4.75
938 950 0.741221 CGCAGAGACCCACTAAAGCC 60.741 60.000 0.00 0.00 0.00 4.35
939 951 1.362406 GCGCAGAGACCCACTAAAGC 61.362 60.000 0.30 0.00 0.00 3.51
940 952 0.247736 AGCGCAGAGACCCACTAAAG 59.752 55.000 11.47 0.00 0.00 1.85
941 953 1.552578 TAGCGCAGAGACCCACTAAA 58.447 50.000 11.47 0.00 0.00 1.85
942 954 1.776662 ATAGCGCAGAGACCCACTAA 58.223 50.000 11.47 0.00 0.00 2.24
943 955 1.776662 AATAGCGCAGAGACCCACTA 58.223 50.000 11.47 0.00 0.00 2.74
944 956 0.905357 AAATAGCGCAGAGACCCACT 59.095 50.000 11.47 0.00 0.00 4.00
945 957 1.009829 CAAATAGCGCAGAGACCCAC 58.990 55.000 11.47 0.00 0.00 4.61
946 958 0.107703 CCAAATAGCGCAGAGACCCA 60.108 55.000 11.47 0.00 0.00 4.51
947 959 1.440145 GCCAAATAGCGCAGAGACCC 61.440 60.000 11.47 0.00 0.00 4.46
948 960 2.017752 GCCAAATAGCGCAGAGACC 58.982 57.895 11.47 0.00 0.00 3.85
957 969 2.102161 CCCGTTGCGCCAAATAGC 59.898 61.111 4.18 0.00 0.00 2.97
958 970 1.302383 TGACCCGTTGCGCCAAATAG 61.302 55.000 4.18 0.00 0.00 1.73
959 971 0.889638 TTGACCCGTTGCGCCAAATA 60.890 50.000 4.18 0.00 0.00 1.40
960 972 2.196925 TTGACCCGTTGCGCCAAAT 61.197 52.632 4.18 0.00 0.00 2.32
961 973 2.829003 TTGACCCGTTGCGCCAAA 60.829 55.556 4.18 0.00 0.00 3.28
962 974 2.661840 TAGTTGACCCGTTGCGCCAA 62.662 55.000 4.18 0.00 0.00 4.52
963 975 3.166490 TAGTTGACCCGTTGCGCCA 62.166 57.895 4.18 0.00 0.00 5.69
964 976 2.357760 TAGTTGACCCGTTGCGCC 60.358 61.111 4.18 0.00 0.00 6.53
965 977 1.623973 GACTAGTTGACCCGTTGCGC 61.624 60.000 0.00 0.00 0.00 6.09
966 978 0.038526 AGACTAGTTGACCCGTTGCG 60.039 55.000 0.00 0.00 0.00 4.85
967 979 2.165319 AAGACTAGTTGACCCGTTGC 57.835 50.000 0.00 0.00 0.00 4.17
968 980 7.064253 CCTTTATAAAGACTAGTTGACCCGTTG 59.936 40.741 23.95 0.31 38.28 4.10
969 981 7.038799 TCCTTTATAAAGACTAGTTGACCCGTT 60.039 37.037 23.95 0.00 38.28 4.44
970 982 6.438425 TCCTTTATAAAGACTAGTTGACCCGT 59.562 38.462 23.95 0.00 38.28 5.28
971 983 6.870769 TCCTTTATAAAGACTAGTTGACCCG 58.129 40.000 23.95 5.16 38.28 5.28
972 984 7.849160 ACTCCTTTATAAAGACTAGTTGACCC 58.151 38.462 23.95 0.00 38.28 4.46
978 990 9.939424 ACCATCTACTCCTTTATAAAGACTAGT 57.061 33.333 23.95 22.32 38.28 2.57
980 992 9.710818 ACACCATCTACTCCTTTATAAAGACTA 57.289 33.333 23.95 9.88 38.28 2.59
981 993 8.611051 ACACCATCTACTCCTTTATAAAGACT 57.389 34.615 23.95 9.78 38.28 3.24
989 1001 8.627403 CGTCTAATAACACCATCTACTCCTTTA 58.373 37.037 0.00 0.00 0.00 1.85
990 1002 7.123847 ACGTCTAATAACACCATCTACTCCTTT 59.876 37.037 0.00 0.00 0.00 3.11
1059 1071 3.964688 TGTCCTTCATAAGCCTCGGAATA 59.035 43.478 0.00 0.00 0.00 1.75
1061 1073 2.093658 GTGTCCTTCATAAGCCTCGGAA 60.094 50.000 0.00 0.00 0.00 4.30
1123 1135 7.340487 CCTTGAAGAGAGTAGGCCAATAAAAAT 59.660 37.037 5.01 0.00 0.00 1.82
1316 1374 7.285788 CCACTTAGTAACGTAATCAACAACAC 58.714 38.462 0.00 0.00 0.00 3.32
1355 2149 7.560262 AGGTGTTATGATCAGCACTACTAGTTA 59.440 37.037 20.04 0.00 36.02 2.24
1440 3202 7.667635 TGAATAAAATGTGAACCACCATCAGTA 59.332 33.333 0.00 0.00 32.73 2.74
1543 3307 6.699642 GCTCTCTATTGCTAAGTTCTACTTGG 59.300 42.308 2.45 0.81 39.11 3.61
1617 3381 7.417003 CCCATAATGCATCATCAAGTTTCTTGA 60.417 37.037 13.34 13.34 0.00 3.02
1698 3462 6.711277 AGAGGTAAGTGACATGCTTTATCAA 58.289 36.000 0.00 0.00 0.00 2.57
1701 3465 6.711277 TCAAGAGGTAAGTGACATGCTTTAT 58.289 36.000 0.00 0.00 0.00 1.40
1792 3556 7.283127 TCAAGTGAGCTAATGTCAAAAAGTCTT 59.717 33.333 0.00 0.00 0.00 3.01
1825 3589 0.323178 TCTCGTAGGCCTCGGTTCTT 60.323 55.000 9.68 0.00 0.00 2.52
1832 3596 0.178068 TTGGCATTCTCGTAGGCCTC 59.822 55.000 9.68 0.00 46.53 4.70
1987 3756 3.713764 AGACCTCCTCAATGATGTAAGGG 59.286 47.826 5.68 0.00 0.00 3.95
1999 3768 3.277962 GGAACGGTAGACCTCCTCA 57.722 57.895 0.00 0.00 30.07 3.86
2159 3959 6.309251 CGGAGTCTGAAACATTCTAGAAAGTC 59.691 42.308 13.38 7.31 0.00 3.01
2190 3990 4.601019 CTTACCGTACCACGTACCTATTG 58.399 47.826 0.00 0.00 40.58 1.90
2301 4104 0.325296 ACCCTCATGGAAGCCTCGTA 60.325 55.000 0.00 0.00 38.00 3.43
2354 4160 1.330655 ACGAGGTACCCATGAGGCAG 61.331 60.000 8.74 0.00 40.58 4.85
2366 4172 0.607217 TCCGAAGAGCACACGAGGTA 60.607 55.000 0.00 0.00 0.00 3.08
2439 4245 1.682740 GTGGTCAAAACCTTCGGGAA 58.317 50.000 0.00 0.00 46.60 3.97


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.