Multiple sequence alignment - TraesCS3A01G206100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G206100 chr3A 100.000 2735 0 0 1 2735 362592719 362589985 0.000000e+00 5051.0
1 TraesCS3A01G206100 chr3A 83.439 157 21 4 229 384 582283367 582283215 1.020000e-29 141.0
2 TraesCS3A01G206100 chr3A 92.632 95 4 3 1902 1994 8632665 8632758 1.710000e-27 134.0
3 TraesCS3A01G206100 chr3A 93.407 91 5 1 1904 1994 220743635 220743724 1.710000e-27 134.0
4 TraesCS3A01G206100 chr3B 92.989 1355 55 12 590 1919 373286336 373284997 0.000000e+00 1940.0
5 TraesCS3A01G206100 chr3B 86.838 623 55 8 2118 2735 373282846 373282246 0.000000e+00 671.0
6 TraesCS3A01G206100 chr3B 93.401 197 12 1 590 785 325768132 325767936 9.580000e-75 291.0
7 TraesCS3A01G206100 chr3B 82.911 158 22 4 228 384 396272032 396271879 1.320000e-28 137.0
8 TraesCS3A01G206100 chr3B 96.296 54 2 0 2000 2053 373285002 373284949 3.750000e-14 89.8
9 TraesCS3A01G206100 chr3B 95.455 44 2 0 2039 2082 819036607 819036564 1.360000e-08 71.3
10 TraesCS3A01G206100 chr3D 95.164 1096 42 6 824 1919 277066110 277067194 0.000000e+00 1720.0
11 TraesCS3A01G206100 chr3D 86.867 632 51 7 2115 2735 277067242 277067852 0.000000e+00 678.0
12 TraesCS3A01G206100 chr3D 95.041 242 10 1 590 831 277065509 277065748 1.990000e-101 379.0
13 TraesCS3A01G206100 chr3D 82.911 158 22 4 228 384 322435445 322435292 1.320000e-28 137.0
14 TraesCS3A01G206100 chr3D 100.000 43 0 0 2000 2042 277067189 277067231 2.260000e-11 80.5
15 TraesCS3A01G206100 chr2D 87.613 331 37 3 1409 1736 363974703 363974374 5.530000e-102 381.0
16 TraesCS3A01G206100 chr2D 97.561 82 2 0 1254 1335 363974890 363974809 1.020000e-29 141.0
17 TraesCS3A01G206100 chr2B 89.527 296 31 0 1441 1736 432133596 432133301 2.570000e-100 375.0
18 TraesCS3A01G206100 chr2B 97.561 82 2 0 1254 1335 432133817 432133736 1.020000e-29 141.0
19 TraesCS3A01G206100 chr2B 82.099 162 24 4 226 386 190022888 190023045 1.710000e-27 134.0
20 TraesCS3A01G206100 chr2B 93.750 48 3 0 2036 2083 250056173 250056126 3.780000e-09 73.1
21 TraesCS3A01G206100 chr2A 89.189 296 32 0 1441 1736 489960494 489960199 1.200000e-98 370.0
22 TraesCS3A01G206100 chr2A 96.341 82 3 0 1254 1335 489960715 489960634 4.750000e-28 135.0
23 TraesCS3A01G206100 chr5D 86.601 306 36 4 1435 1736 356901531 356901835 1.570000e-87 333.0
24 TraesCS3A01G206100 chr5D 96.591 88 3 0 1248 1335 356901298 356901385 2.190000e-31 147.0
25 TraesCS3A01G206100 chr5D 97.917 48 1 0 2035 2082 482889065 482889112 1.750000e-12 84.2
26 TraesCS3A01G206100 chr5A 86.601 306 36 4 1435 1736 458214121 458214425 1.570000e-87 333.0
27 TraesCS3A01G206100 chr5A 97.561 82 2 0 1254 1335 458213895 458213976 1.020000e-29 141.0
28 TraesCS3A01G206100 chr5A 82.803 157 22 4 229 384 475272464 475272616 4.750000e-28 135.0
29 TraesCS3A01G206100 chr5A 82.166 157 22 5 236 390 303399958 303399806 2.210000e-26 130.0
30 TraesCS3A01G206100 chr5A 81.646 158 24 5 228 384 444533298 444533145 2.860000e-25 126.0
31 TraesCS3A01G206100 chr5A 88.298 94 11 0 1911 2004 680511811 680511718 2.230000e-21 113.0
32 TraesCS3A01G206100 chr5B 85.902 305 40 2 1435 1736 421668937 421669241 3.400000e-84 322.0
33 TraesCS3A01G206100 chr5B 96.591 88 3 0 1248 1335 421668705 421668792 2.190000e-31 147.0
34 TraesCS3A01G206100 chr1A 91.346 104 8 1 1902 2005 41368610 41368712 1.020000e-29 141.0
35 TraesCS3A01G206100 chr1A 96.154 78 3 0 1917 1994 584966925 584966848 7.950000e-26 128.0
36 TraesCS3A01G206100 chr1A 93.827 81 4 1 1911 1991 592121213 592121292 1.330000e-23 121.0
37 TraesCS3A01G206100 chr6A 81.646 158 25 3 228 385 184388329 184388176 7.950000e-26 128.0
38 TraesCS3A01G206100 chr6D 81.646 158 24 4 229 385 392273226 392273073 2.860000e-25 126.0
39 TraesCS3A01G206100 chr6B 92.045 88 5 2 1908 1994 203685285 203685199 3.700000e-24 122.0
40 TraesCS3A01G206100 chr6B 95.556 45 2 0 2039 2083 313149827 313149783 3.780000e-09 73.1
41 TraesCS3A01G206100 chr7A 88.298 94 11 0 1910 2003 731229886 731229793 2.230000e-21 113.0
42 TraesCS3A01G206100 chr1B 87.629 97 11 1 1908 2004 26838146 26838051 8.010000e-21 111.0
43 TraesCS3A01G206100 chr1B 100.000 43 0 0 2041 2083 602650693 602650735 2.260000e-11 80.5
44 TraesCS3A01G206100 chr1B 93.478 46 3 0 2037 2082 563119873 563119828 4.890000e-08 69.4
45 TraesCS3A01G206100 chr7D 97.778 45 1 0 2038 2082 584302462 584302506 8.120000e-11 78.7
46 TraesCS3A01G206100 chr4A 95.745 47 2 0 2036 2082 179474309 179474263 2.920000e-10 76.8
47 TraesCS3A01G206100 chr4B 93.617 47 3 0 2036 2082 429357396 429357442 1.360000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G206100 chr3A 362589985 362592719 2734 True 5051.000000 5051 100.0000 1 2735 1 chr3A.!!$R1 2734
1 TraesCS3A01G206100 chr3B 373282246 373286336 4090 True 900.266667 1940 92.0410 590 2735 3 chr3B.!!$R4 2145
2 TraesCS3A01G206100 chr3D 277065509 277067852 2343 False 714.375000 1720 94.2680 590 2735 4 chr3D.!!$F1 2145
3 TraesCS3A01G206100 chr2D 363974374 363974890 516 True 261.000000 381 92.5870 1254 1736 2 chr2D.!!$R1 482
4 TraesCS3A01G206100 chr2B 432133301 432133817 516 True 258.000000 375 93.5440 1254 1736 2 chr2B.!!$R2 482
5 TraesCS3A01G206100 chr2A 489960199 489960715 516 True 252.500000 370 92.7650 1254 1736 2 chr2A.!!$R1 482
6 TraesCS3A01G206100 chr5D 356901298 356901835 537 False 240.000000 333 91.5960 1248 1736 2 chr5D.!!$F2 488
7 TraesCS3A01G206100 chr5A 458213895 458214425 530 False 237.000000 333 92.0810 1254 1736 2 chr5A.!!$F2 482
8 TraesCS3A01G206100 chr5B 421668705 421669241 536 False 234.500000 322 91.2465 1248 1736 2 chr5B.!!$F1 488

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
465 466 0.172352 GCTTGGTCTCGGAGACAGAG 59.828 60.0 32.5 27.9 46.79 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2109 2946 0.029567 ATCGAAAAACGGCGCAACAA 59.97 45.0 10.83 0.0 42.82 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 8.096621 TGGTTATATAATTTCCTGTCTGGACA 57.903 34.615 0.00 3.34 46.14 4.02
55 56 8.723365 TGGTTATATAATTTCCTGTCTGGACAT 58.277 33.333 3.80 0.00 46.14 3.06
60 61 5.841957 AATTTCCTGTCTGGACATATTGC 57.158 39.130 3.80 0.00 46.14 3.56
61 62 4.574674 TTTCCTGTCTGGACATATTGCT 57.425 40.909 3.80 0.00 46.14 3.91
62 63 4.574674 TTCCTGTCTGGACATATTGCTT 57.425 40.909 3.80 0.00 46.14 3.91
63 64 5.692115 TTCCTGTCTGGACATATTGCTTA 57.308 39.130 3.80 0.00 46.14 3.09
64 65 5.023533 TCCTGTCTGGACATATTGCTTAC 57.976 43.478 3.80 0.00 40.56 2.34
65 66 4.469586 TCCTGTCTGGACATATTGCTTACA 59.530 41.667 3.80 0.00 40.56 2.41
66 67 5.130975 TCCTGTCTGGACATATTGCTTACAT 59.869 40.000 3.80 0.00 40.56 2.29
67 68 5.237996 CCTGTCTGGACATATTGCTTACATG 59.762 44.000 3.80 0.00 41.01 3.21
68 69 5.988287 TGTCTGGACATATTGCTTACATGA 58.012 37.500 0.00 0.00 36.21 3.07
69 70 6.413892 TGTCTGGACATATTGCTTACATGAA 58.586 36.000 0.00 0.00 36.21 2.57
70 71 6.539826 TGTCTGGACATATTGCTTACATGAAG 59.460 38.462 0.00 0.00 36.21 3.02
134 135 9.098355 TCTAGTAACATCAATTTGATCTTTCGG 57.902 33.333 8.95 0.41 34.28 4.30
135 136 7.921786 AGTAACATCAATTTGATCTTTCGGA 57.078 32.000 8.95 0.00 34.28 4.55
136 137 8.511604 AGTAACATCAATTTGATCTTTCGGAT 57.488 30.769 8.95 0.00 34.28 4.18
137 138 8.960591 AGTAACATCAATTTGATCTTTCGGATT 58.039 29.630 8.95 0.00 34.28 3.01
142 143 9.552114 CATCAATTTGATCTTTCGGATTATAGC 57.448 33.333 8.95 0.00 34.28 2.97
143 144 8.675705 TCAATTTGATCTTTCGGATTATAGCA 57.324 30.769 0.00 0.00 34.33 3.49
144 145 9.288576 TCAATTTGATCTTTCGGATTATAGCAT 57.711 29.630 0.00 0.00 34.33 3.79
184 185 9.311916 TGATCAAACTTAAAAACATTTGACTGG 57.688 29.630 0.00 0.00 42.22 4.00
185 186 9.528018 GATCAAACTTAAAAACATTTGACTGGA 57.472 29.630 0.67 0.00 42.22 3.86
186 187 9.883142 ATCAAACTTAAAAACATTTGACTGGAA 57.117 25.926 0.67 0.00 42.22 3.53
187 188 9.712305 TCAAACTTAAAAACATTTGACTGGAAA 57.288 25.926 0.00 0.00 36.42 3.13
188 189 9.971744 CAAACTTAAAAACATTTGACTGGAAAG 57.028 29.630 0.00 0.00 34.62 2.62
189 190 9.936759 AAACTTAAAAACATTTGACTGGAAAGA 57.063 25.926 0.00 0.00 0.00 2.52
190 191 8.926715 ACTTAAAAACATTTGACTGGAAAGAC 57.073 30.769 0.00 0.00 0.00 3.01
191 192 8.527810 ACTTAAAAACATTTGACTGGAAAGACA 58.472 29.630 0.00 0.00 0.00 3.41
192 193 9.533253 CTTAAAAACATTTGACTGGAAAGACAT 57.467 29.630 0.00 0.00 0.00 3.06
195 196 7.823745 AAACATTTGACTGGAAAGACATAGT 57.176 32.000 0.00 0.00 0.00 2.12
196 197 8.918202 AAACATTTGACTGGAAAGACATAGTA 57.082 30.769 0.00 0.00 0.00 1.82
197 198 8.918202 AACATTTGACTGGAAAGACATAGTAA 57.082 30.769 0.00 0.00 0.00 2.24
198 199 8.918202 ACATTTGACTGGAAAGACATAGTAAA 57.082 30.769 0.00 0.00 0.00 2.01
199 200 9.349713 ACATTTGACTGGAAAGACATAGTAAAA 57.650 29.630 0.00 0.00 30.38 1.52
204 205 9.667107 TGACTGGAAAGACATAGTAAAATTAGG 57.333 33.333 0.00 0.00 0.00 2.69
205 206 9.886132 GACTGGAAAGACATAGTAAAATTAGGA 57.114 33.333 0.00 0.00 0.00 2.94
206 207 9.668497 ACTGGAAAGACATAGTAAAATTAGGAC 57.332 33.333 0.00 0.00 0.00 3.85
207 208 9.667107 CTGGAAAGACATAGTAAAATTAGGACA 57.333 33.333 0.00 0.00 0.00 4.02
210 211 9.937175 GAAAGACATAGTAAAATTAGGACATGC 57.063 33.333 0.00 0.00 0.00 4.06
211 212 9.461312 AAAGACATAGTAAAATTAGGACATGCA 57.539 29.630 0.00 0.00 0.00 3.96
212 213 9.461312 AAGACATAGTAAAATTAGGACATGCAA 57.539 29.630 0.00 0.00 0.00 4.08
213 214 9.632638 AGACATAGTAAAATTAGGACATGCAAT 57.367 29.630 0.00 0.00 0.00 3.56
223 224 9.603921 AAATTAGGACATGCAATTTAAATCAGG 57.396 29.630 0.10 0.83 31.77 3.86
224 225 5.603170 AGGACATGCAATTTAAATCAGGG 57.397 39.130 0.10 0.00 0.00 4.45
225 226 5.025453 AGGACATGCAATTTAAATCAGGGT 58.975 37.500 0.10 0.00 0.00 4.34
226 227 6.194235 AGGACATGCAATTTAAATCAGGGTA 58.806 36.000 0.10 0.00 0.00 3.69
227 228 6.322201 AGGACATGCAATTTAAATCAGGGTAG 59.678 38.462 0.10 0.00 0.00 3.18
228 229 6.096846 GGACATGCAATTTAAATCAGGGTAGT 59.903 38.462 0.10 0.00 0.00 2.73
229 230 7.284489 GGACATGCAATTTAAATCAGGGTAGTA 59.716 37.037 0.10 0.00 0.00 1.82
230 231 7.996385 ACATGCAATTTAAATCAGGGTAGTAC 58.004 34.615 0.10 0.00 0.00 2.73
231 232 7.834181 ACATGCAATTTAAATCAGGGTAGTACT 59.166 33.333 0.00 0.00 0.00 2.73
232 233 8.686334 CATGCAATTTAAATCAGGGTAGTACTT 58.314 33.333 0.00 0.00 0.00 2.24
233 234 8.276252 TGCAATTTAAATCAGGGTAGTACTTC 57.724 34.615 0.00 0.00 0.00 3.01
234 235 7.885922 TGCAATTTAAATCAGGGTAGTACTTCA 59.114 33.333 0.00 0.00 0.00 3.02
235 236 8.903820 GCAATTTAAATCAGGGTAGTACTTCAT 58.096 33.333 0.00 0.00 0.00 2.57
237 238 9.628500 AATTTAAATCAGGGTAGTACTTCATCC 57.372 33.333 0.00 0.00 0.00 3.51
238 239 4.939052 AATCAGGGTAGTACTTCATCCG 57.061 45.455 0.00 0.00 0.00 4.18
239 240 3.377253 TCAGGGTAGTACTTCATCCGT 57.623 47.619 0.00 0.00 0.00 4.69
240 241 3.705051 TCAGGGTAGTACTTCATCCGTT 58.295 45.455 0.00 0.00 0.00 4.44
241 242 4.091549 TCAGGGTAGTACTTCATCCGTTT 58.908 43.478 0.00 0.00 0.00 3.60
242 243 5.263599 TCAGGGTAGTACTTCATCCGTTTA 58.736 41.667 0.00 0.00 0.00 2.01
243 244 5.895534 TCAGGGTAGTACTTCATCCGTTTAT 59.104 40.000 0.00 0.00 0.00 1.40
244 245 7.062322 TCAGGGTAGTACTTCATCCGTTTATA 58.938 38.462 0.00 0.00 0.00 0.98
245 246 7.560991 TCAGGGTAGTACTTCATCCGTTTATAA 59.439 37.037 0.00 0.00 0.00 0.98
246 247 8.199449 CAGGGTAGTACTTCATCCGTTTATAAA 58.801 37.037 0.00 0.00 0.00 1.40
247 248 8.931568 AGGGTAGTACTTCATCCGTTTATAAAT 58.068 33.333 0.00 0.00 0.00 1.40
298 299 7.814264 AGTCTTTGTTCAGATTGAAATGAGT 57.186 32.000 0.00 0.00 38.22 3.41
299 300 7.646314 AGTCTTTGTTCAGATTGAAATGAGTG 58.354 34.615 0.00 0.00 38.22 3.51
300 301 7.500227 AGTCTTTGTTCAGATTGAAATGAGTGA 59.500 33.333 0.00 0.00 38.22 3.41
301 302 8.131100 GTCTTTGTTCAGATTGAAATGAGTGAA 58.869 33.333 0.00 0.00 38.22 3.18
302 303 8.131100 TCTTTGTTCAGATTGAAATGAGTGAAC 58.869 33.333 6.15 6.15 42.60 3.18
304 305 7.332213 TGTTCAGATTGAAATGAGTGAACAA 57.668 32.000 12.08 0.00 46.51 2.83
305 306 7.770201 TGTTCAGATTGAAATGAGTGAACAAA 58.230 30.769 12.08 0.00 46.51 2.83
306 307 7.701924 TGTTCAGATTGAAATGAGTGAACAAAC 59.298 33.333 12.08 0.00 46.51 2.93
307 308 7.332213 TCAGATTGAAATGAGTGAACAAACA 57.668 32.000 0.00 0.00 0.00 2.83
308 309 7.195646 TCAGATTGAAATGAGTGAACAAACAC 58.804 34.615 0.00 0.00 40.60 3.32
309 310 6.974048 CAGATTGAAATGAGTGAACAAACACA 59.026 34.615 0.00 0.00 42.45 3.72
310 311 6.974622 AGATTGAAATGAGTGAACAAACACAC 59.025 34.615 0.00 0.00 42.45 3.82
312 313 6.993786 TGAAATGAGTGAACAAACACACTA 57.006 33.333 0.00 0.00 45.54 2.74
313 314 7.384439 TGAAATGAGTGAACAAACACACTAA 57.616 32.000 0.00 0.00 45.54 2.24
314 315 7.821652 TGAAATGAGTGAACAAACACACTAAA 58.178 30.769 0.00 0.00 45.54 1.85
315 316 8.300286 TGAAATGAGTGAACAAACACACTAAAA 58.700 29.630 0.00 0.00 45.54 1.52
316 317 8.460831 AAATGAGTGAACAAACACACTAAAAC 57.539 30.769 0.00 0.00 45.54 2.43
317 318 6.561737 TGAGTGAACAAACACACTAAAACA 57.438 33.333 0.00 0.00 45.54 2.83
318 319 7.151999 TGAGTGAACAAACACACTAAAACAT 57.848 32.000 0.00 0.00 45.54 2.71
319 320 8.270080 TGAGTGAACAAACACACTAAAACATA 57.730 30.769 0.00 0.00 45.54 2.29
320 321 8.731605 TGAGTGAACAAACACACTAAAACATAA 58.268 29.630 0.00 0.00 45.54 1.90
321 322 9.730420 GAGTGAACAAACACACTAAAACATAAT 57.270 29.630 0.00 0.00 45.54 1.28
354 355 9.753674 ATACATCTGATTCAGGGAAAGTTAAAA 57.246 29.630 13.59 0.00 31.51 1.52
355 356 7.886338 ACATCTGATTCAGGGAAAGTTAAAAC 58.114 34.615 13.59 0.00 31.51 2.43
356 357 7.505585 ACATCTGATTCAGGGAAAGTTAAAACA 59.494 33.333 13.59 0.00 31.51 2.83
357 358 8.526147 CATCTGATTCAGGGAAAGTTAAAACAT 58.474 33.333 13.59 0.00 31.51 2.71
358 359 8.110860 TCTGATTCAGGGAAAGTTAAAACATC 57.889 34.615 13.59 0.00 31.51 3.06
359 360 7.944554 TCTGATTCAGGGAAAGTTAAAACATCT 59.055 33.333 13.59 0.00 31.51 2.90
360 361 8.477419 TGATTCAGGGAAAGTTAAAACATCTT 57.523 30.769 0.00 0.00 0.00 2.40
361 362 9.581289 TGATTCAGGGAAAGTTAAAACATCTTA 57.419 29.630 0.00 0.00 0.00 2.10
363 364 7.448748 TCAGGGAAAGTTAAAACATCTTAGC 57.551 36.000 0.00 0.00 0.00 3.09
364 365 7.001674 TCAGGGAAAGTTAAAACATCTTAGCA 58.998 34.615 0.00 0.00 0.00 3.49
365 366 7.669722 TCAGGGAAAGTTAAAACATCTTAGCAT 59.330 33.333 0.00 0.00 0.00 3.79
366 367 8.306761 CAGGGAAAGTTAAAACATCTTAGCATT 58.693 33.333 0.00 0.00 0.00 3.56
367 368 8.870116 AGGGAAAGTTAAAACATCTTAGCATTT 58.130 29.630 0.00 0.00 0.00 2.32
368 369 8.925700 GGGAAAGTTAAAACATCTTAGCATTTG 58.074 33.333 0.00 0.00 0.00 2.32
369 370 9.476202 GGAAAGTTAAAACATCTTAGCATTTGT 57.524 29.630 0.00 0.00 0.00 2.83
373 374 9.683069 AGTTAAAACATCTTAGCATTTGTGAAG 57.317 29.630 0.00 0.00 0.00 3.02
374 375 8.915654 GTTAAAACATCTTAGCATTTGTGAAGG 58.084 33.333 0.00 0.00 0.00 3.46
375 376 5.649782 AACATCTTAGCATTTGTGAAGGG 57.350 39.130 0.00 0.00 0.00 3.95
376 377 4.922206 ACATCTTAGCATTTGTGAAGGGA 58.078 39.130 0.00 0.00 0.00 4.20
377 378 4.946157 ACATCTTAGCATTTGTGAAGGGAG 59.054 41.667 0.00 0.00 0.00 4.30
378 379 3.955471 TCTTAGCATTTGTGAAGGGAGG 58.045 45.455 0.00 0.00 0.00 4.30
379 380 2.806945 TAGCATTTGTGAAGGGAGGG 57.193 50.000 0.00 0.00 0.00 4.30
380 381 1.075601 AGCATTTGTGAAGGGAGGGA 58.924 50.000 0.00 0.00 0.00 4.20
381 382 1.005215 AGCATTTGTGAAGGGAGGGAG 59.995 52.381 0.00 0.00 0.00 4.30
382 383 1.272147 GCATTTGTGAAGGGAGGGAGT 60.272 52.381 0.00 0.00 0.00 3.85
383 384 2.026262 GCATTTGTGAAGGGAGGGAGTA 60.026 50.000 0.00 0.00 0.00 2.59
384 385 3.372025 GCATTTGTGAAGGGAGGGAGTAT 60.372 47.826 0.00 0.00 0.00 2.12
385 386 4.141482 GCATTTGTGAAGGGAGGGAGTATA 60.141 45.833 0.00 0.00 0.00 1.47
386 387 5.615289 CATTTGTGAAGGGAGGGAGTATAG 58.385 45.833 0.00 0.00 0.00 1.31
387 388 4.620086 TTGTGAAGGGAGGGAGTATAGA 57.380 45.455 0.00 0.00 0.00 1.98
388 389 4.834406 TGTGAAGGGAGGGAGTATAGAT 57.166 45.455 0.00 0.00 0.00 1.98
389 390 5.942977 TGTGAAGGGAGGGAGTATAGATA 57.057 43.478 0.00 0.00 0.00 1.98
390 391 6.485388 TGTGAAGGGAGGGAGTATAGATAT 57.515 41.667 0.00 0.00 0.00 1.63
391 392 6.494952 TGTGAAGGGAGGGAGTATAGATATC 58.505 44.000 0.00 0.00 0.00 1.63
392 393 5.591067 GTGAAGGGAGGGAGTATAGATATCG 59.409 48.000 0.00 0.00 0.00 2.92
393 394 5.253330 TGAAGGGAGGGAGTATAGATATCGT 59.747 44.000 0.00 0.00 0.00 3.73
394 395 5.118729 AGGGAGGGAGTATAGATATCGTG 57.881 47.826 0.00 0.00 0.00 4.35
395 396 3.633065 GGGAGGGAGTATAGATATCGTGC 59.367 52.174 0.00 0.00 0.00 5.34
396 397 4.528920 GGAGGGAGTATAGATATCGTGCT 58.471 47.826 0.00 0.00 0.00 4.40
397 398 5.397672 GGGAGGGAGTATAGATATCGTGCTA 60.398 48.000 0.00 0.00 0.00 3.49
398 399 6.300703 GGAGGGAGTATAGATATCGTGCTAT 58.699 44.000 0.00 0.00 0.00 2.97
399 400 6.773685 GGAGGGAGTATAGATATCGTGCTATT 59.226 42.308 0.00 0.00 0.00 1.73
400 401 7.255312 GGAGGGAGTATAGATATCGTGCTATTG 60.255 44.444 0.00 0.00 0.00 1.90
401 402 7.120051 AGGGAGTATAGATATCGTGCTATTGT 58.880 38.462 0.00 0.00 0.00 2.71
402 403 7.616150 AGGGAGTATAGATATCGTGCTATTGTT 59.384 37.037 0.00 0.00 0.00 2.83
403 404 8.251721 GGGAGTATAGATATCGTGCTATTGTTT 58.748 37.037 0.00 0.00 0.00 2.83
404 405 9.640963 GGAGTATAGATATCGTGCTATTGTTTT 57.359 33.333 0.00 0.00 0.00 2.43
409 410 7.470289 AGATATCGTGCTATTGTTTTCAGAC 57.530 36.000 0.00 0.00 0.00 3.51
410 411 7.268586 AGATATCGTGCTATTGTTTTCAGACT 58.731 34.615 0.00 0.00 0.00 3.24
411 412 7.766278 AGATATCGTGCTATTGTTTTCAGACTT 59.234 33.333 0.00 0.00 0.00 3.01
412 413 8.942338 ATATCGTGCTATTGTTTTCAGACTTA 57.058 30.769 0.00 0.00 0.00 2.24
413 414 7.667043 ATCGTGCTATTGTTTTCAGACTTAA 57.333 32.000 0.00 0.00 0.00 1.85
414 415 7.117241 TCGTGCTATTGTTTTCAGACTTAAG 57.883 36.000 0.00 0.00 0.00 1.85
415 416 5.790495 CGTGCTATTGTTTTCAGACTTAAGC 59.210 40.000 1.29 0.00 0.00 3.09
416 417 5.790495 GTGCTATTGTTTTCAGACTTAAGCG 59.210 40.000 1.29 0.00 0.00 4.68
417 418 5.106712 TGCTATTGTTTTCAGACTTAAGCGG 60.107 40.000 1.29 0.00 0.00 5.52
418 419 5.106673 GCTATTGTTTTCAGACTTAAGCGGT 60.107 40.000 1.29 0.00 0.00 5.68
419 420 5.767816 ATTGTTTTCAGACTTAAGCGGTT 57.232 34.783 4.76 4.76 0.00 4.44
420 421 4.545823 TGTTTTCAGACTTAAGCGGTTG 57.454 40.909 10.73 0.00 0.00 3.77
421 422 3.314080 TGTTTTCAGACTTAAGCGGTTGG 59.686 43.478 10.73 5.39 0.00 3.77
422 423 2.922740 TTCAGACTTAAGCGGTTGGT 57.077 45.000 10.73 8.74 0.00 3.67
423 424 4.339872 TTTCAGACTTAAGCGGTTGGTA 57.660 40.909 10.73 0.00 0.00 3.25
424 425 4.339872 TTCAGACTTAAGCGGTTGGTAA 57.660 40.909 10.73 0.00 0.00 2.85
425 426 3.656559 TCAGACTTAAGCGGTTGGTAAC 58.343 45.455 10.73 0.00 0.00 2.50
441 442 5.617528 TGGTAACAGTAAGGAAGTGTGAA 57.382 39.130 0.00 0.00 46.17 3.18
442 443 5.991861 TGGTAACAGTAAGGAAGTGTGAAA 58.008 37.500 0.00 0.00 46.17 2.69
443 444 6.416415 TGGTAACAGTAAGGAAGTGTGAAAA 58.584 36.000 0.00 0.00 46.17 2.29
444 445 6.540914 TGGTAACAGTAAGGAAGTGTGAAAAG 59.459 38.462 0.00 0.00 46.17 2.27
445 446 6.541278 GGTAACAGTAAGGAAGTGTGAAAAGT 59.459 38.462 0.00 0.00 41.06 2.66
446 447 6.436843 AACAGTAAGGAAGTGTGAAAAGTG 57.563 37.500 0.00 0.00 41.06 3.16
447 448 4.335594 ACAGTAAGGAAGTGTGAAAAGTGC 59.664 41.667 0.00 0.00 40.38 4.40
448 449 4.576463 CAGTAAGGAAGTGTGAAAAGTGCT 59.424 41.667 0.00 0.00 0.00 4.40
449 450 5.066505 CAGTAAGGAAGTGTGAAAAGTGCTT 59.933 40.000 0.00 0.00 0.00 3.91
450 451 4.376340 AAGGAAGTGTGAAAAGTGCTTG 57.624 40.909 0.00 0.00 0.00 4.01
451 452 2.689983 AGGAAGTGTGAAAAGTGCTTGG 59.310 45.455 0.00 0.00 0.00 3.61
452 453 2.427095 GGAAGTGTGAAAAGTGCTTGGT 59.573 45.455 0.00 0.00 0.00 3.67
453 454 3.489229 GGAAGTGTGAAAAGTGCTTGGTC 60.489 47.826 0.00 0.00 0.00 4.02
454 455 3.004752 AGTGTGAAAAGTGCTTGGTCT 57.995 42.857 0.00 0.00 0.00 3.85
455 456 2.945668 AGTGTGAAAAGTGCTTGGTCTC 59.054 45.455 0.00 0.00 0.00 3.36
456 457 1.939934 TGTGAAAAGTGCTTGGTCTCG 59.060 47.619 0.00 0.00 0.00 4.04
457 458 1.264288 GTGAAAAGTGCTTGGTCTCGG 59.736 52.381 0.00 0.00 0.00 4.63
458 459 1.140052 TGAAAAGTGCTTGGTCTCGGA 59.860 47.619 0.00 0.00 0.00 4.55
459 460 1.801178 GAAAAGTGCTTGGTCTCGGAG 59.199 52.381 0.00 0.00 0.00 4.63
460 461 1.048601 AAAGTGCTTGGTCTCGGAGA 58.951 50.000 2.97 2.97 0.00 3.71
461 462 0.318762 AAGTGCTTGGTCTCGGAGAC 59.681 55.000 26.28 26.28 44.32 3.36
462 463 0.827925 AGTGCTTGGTCTCGGAGACA 60.828 55.000 32.50 19.31 46.79 3.41
463 464 0.389166 GTGCTTGGTCTCGGAGACAG 60.389 60.000 32.50 24.44 46.79 3.51
464 465 0.539669 TGCTTGGTCTCGGAGACAGA 60.540 55.000 32.50 21.32 46.79 3.41
465 466 0.172352 GCTTGGTCTCGGAGACAGAG 59.828 60.000 32.50 27.90 46.79 3.35
466 467 1.540267 CTTGGTCTCGGAGACAGAGT 58.460 55.000 32.50 0.00 46.79 3.24
467 468 2.712709 CTTGGTCTCGGAGACAGAGTA 58.287 52.381 32.50 14.69 46.79 2.59
468 469 2.873094 TGGTCTCGGAGACAGAGTAA 57.127 50.000 32.50 12.72 46.79 2.24
469 470 3.367646 TGGTCTCGGAGACAGAGTAAT 57.632 47.619 32.50 0.00 46.79 1.89
470 471 3.280295 TGGTCTCGGAGACAGAGTAATC 58.720 50.000 32.50 16.97 46.79 1.75
471 472 3.280295 GGTCTCGGAGACAGAGTAATCA 58.720 50.000 32.50 0.00 46.79 2.57
472 473 3.695060 GGTCTCGGAGACAGAGTAATCAA 59.305 47.826 32.50 0.00 46.79 2.57
473 474 4.339814 GGTCTCGGAGACAGAGTAATCAAT 59.660 45.833 32.50 0.00 46.79 2.57
474 475 5.163499 GGTCTCGGAGACAGAGTAATCAATT 60.163 44.000 32.50 0.00 46.79 2.32
475 476 6.334202 GTCTCGGAGACAGAGTAATCAATTT 58.666 40.000 28.54 0.00 44.45 1.82
476 477 7.416438 GGTCTCGGAGACAGAGTAATCAATTTA 60.416 40.741 32.50 0.00 46.79 1.40
477 478 7.646130 GTCTCGGAGACAGAGTAATCAATTTAG 59.354 40.741 28.54 0.00 44.45 1.85
478 479 7.339721 TCTCGGAGACAGAGTAATCAATTTAGT 59.660 37.037 2.97 0.00 37.07 2.24
479 480 8.515695 TCGGAGACAGAGTAATCAATTTAGTA 57.484 34.615 0.00 0.00 0.00 1.82
480 481 8.404000 TCGGAGACAGAGTAATCAATTTAGTAC 58.596 37.037 0.00 0.00 0.00 2.73
481 482 7.648510 CGGAGACAGAGTAATCAATTTAGTACC 59.351 40.741 0.00 0.00 0.00 3.34
482 483 7.927092 GGAGACAGAGTAATCAATTTAGTACCC 59.073 40.741 0.00 0.00 0.00 3.69
483 484 8.611051 AGACAGAGTAATCAATTTAGTACCCT 57.389 34.615 0.00 0.00 0.00 4.34
484 485 8.697292 AGACAGAGTAATCAATTTAGTACCCTC 58.303 37.037 0.00 0.00 0.00 4.30
485 486 7.490000 ACAGAGTAATCAATTTAGTACCCTCG 58.510 38.462 0.00 0.00 0.00 4.63
486 487 6.421202 CAGAGTAATCAATTTAGTACCCTCGC 59.579 42.308 0.00 0.00 0.00 5.03
487 488 6.097839 AGAGTAATCAATTTAGTACCCTCGCA 59.902 38.462 0.00 0.00 0.00 5.10
488 489 6.646267 AGTAATCAATTTAGTACCCTCGCAA 58.354 36.000 0.00 0.00 0.00 4.85
489 490 7.107542 AGTAATCAATTTAGTACCCTCGCAAA 58.892 34.615 0.00 0.00 0.00 3.68
490 491 6.827586 AATCAATTTAGTACCCTCGCAAAA 57.172 33.333 0.00 0.00 0.00 2.44
491 492 6.827586 ATCAATTTAGTACCCTCGCAAAAA 57.172 33.333 0.00 0.00 0.00 1.94
533 534 9.919348 TTAGTACATGTACTTTTTCAAACGAAC 57.081 29.630 36.44 9.67 43.35 3.95
534 535 7.976826 AGTACATGTACTTTTTCAAACGAACA 58.023 30.769 28.97 0.00 43.35 3.18
535 536 8.452534 AGTACATGTACTTTTTCAAACGAACAA 58.547 29.630 28.97 0.00 43.35 2.83
536 537 9.228636 GTACATGTACTTTTTCAAACGAACAAT 57.771 29.630 25.56 0.00 33.45 2.71
538 539 9.228636 ACATGTACTTTTTCAAACGAACAATAC 57.771 29.630 0.00 0.00 0.00 1.89
539 540 9.227490 CATGTACTTTTTCAAACGAACAATACA 57.773 29.630 0.00 0.00 0.00 2.29
540 541 8.603983 TGTACTTTTTCAAACGAACAATACAC 57.396 30.769 0.00 0.00 0.00 2.90
541 542 8.452534 TGTACTTTTTCAAACGAACAATACACT 58.547 29.630 0.00 0.00 0.00 3.55
542 543 7.734538 ACTTTTTCAAACGAACAATACACTG 57.265 32.000 0.00 0.00 0.00 3.66
543 544 7.531716 ACTTTTTCAAACGAACAATACACTGA 58.468 30.769 0.00 0.00 0.00 3.41
544 545 8.024285 ACTTTTTCAAACGAACAATACACTGAA 58.976 29.630 0.00 0.00 0.00 3.02
545 546 7.962934 TTTTCAAACGAACAATACACTGAAG 57.037 32.000 0.00 0.00 0.00 3.02
546 547 5.090652 TCAAACGAACAATACACTGAAGC 57.909 39.130 0.00 0.00 0.00 3.86
547 548 4.572795 TCAAACGAACAATACACTGAAGCA 59.427 37.500 0.00 0.00 0.00 3.91
548 549 4.468095 AACGAACAATACACTGAAGCAC 57.532 40.909 0.00 0.00 0.00 4.40
549 550 3.462982 ACGAACAATACACTGAAGCACA 58.537 40.909 0.00 0.00 0.00 4.57
550 551 3.874543 ACGAACAATACACTGAAGCACAA 59.125 39.130 0.00 0.00 0.00 3.33
551 552 4.024893 ACGAACAATACACTGAAGCACAAG 60.025 41.667 0.00 0.00 0.00 3.16
552 553 3.904136 ACAATACACTGAAGCACAAGC 57.096 42.857 0.00 0.00 42.56 4.01
569 570 6.490534 GCACAAGCTAGAAACAAATATCTCC 58.509 40.000 0.00 0.00 37.91 3.71
570 571 6.094048 GCACAAGCTAGAAACAAATATCTCCA 59.906 38.462 0.00 0.00 37.91 3.86
571 572 7.201767 GCACAAGCTAGAAACAAATATCTCCAT 60.202 37.037 0.00 0.00 37.91 3.41
572 573 8.127327 CACAAGCTAGAAACAAATATCTCCATG 58.873 37.037 0.00 0.00 0.00 3.66
573 574 8.049117 ACAAGCTAGAAACAAATATCTCCATGA 58.951 33.333 0.00 0.00 0.00 3.07
574 575 8.896744 CAAGCTAGAAACAAATATCTCCATGAA 58.103 33.333 0.00 0.00 0.00 2.57
575 576 8.443953 AGCTAGAAACAAATATCTCCATGAAC 57.556 34.615 0.00 0.00 0.00 3.18
576 577 7.500559 AGCTAGAAACAAATATCTCCATGAACC 59.499 37.037 0.00 0.00 0.00 3.62
577 578 6.683974 AGAAACAAATATCTCCATGAACCG 57.316 37.500 0.00 0.00 0.00 4.44
578 579 6.414732 AGAAACAAATATCTCCATGAACCGA 58.585 36.000 0.00 0.00 0.00 4.69
579 580 6.884295 AGAAACAAATATCTCCATGAACCGAA 59.116 34.615 0.00 0.00 0.00 4.30
580 581 7.393234 AGAAACAAATATCTCCATGAACCGAAA 59.607 33.333 0.00 0.00 0.00 3.46
581 582 7.461182 AACAAATATCTCCATGAACCGAAAA 57.539 32.000 0.00 0.00 0.00 2.29
582 583 7.088589 ACAAATATCTCCATGAACCGAAAAG 57.911 36.000 0.00 0.00 0.00 2.27
583 584 6.884295 ACAAATATCTCCATGAACCGAAAAGA 59.116 34.615 0.00 0.00 0.00 2.52
584 585 6.927294 AATATCTCCATGAACCGAAAAGAC 57.073 37.500 0.00 0.00 0.00 3.01
585 586 4.559862 ATCTCCATGAACCGAAAAGACT 57.440 40.909 0.00 0.00 0.00 3.24
586 587 5.677319 ATCTCCATGAACCGAAAAGACTA 57.323 39.130 0.00 0.00 0.00 2.59
587 588 4.817517 TCTCCATGAACCGAAAAGACTAC 58.182 43.478 0.00 0.00 0.00 2.73
588 589 4.527038 TCTCCATGAACCGAAAAGACTACT 59.473 41.667 0.00 0.00 0.00 2.57
593 594 7.177216 TCCATGAACCGAAAAGACTACTACTAA 59.823 37.037 0.00 0.00 0.00 2.24
622 624 7.534723 AAATATGTATGCAAATCATCCAGCT 57.465 32.000 0.00 0.00 36.63 4.24
690 692 1.079819 AGCGACTGGTCCATCGTTG 60.080 57.895 18.68 9.03 40.49 4.10
818 820 8.275187 TGGACATCCTTACCATACAGAATTAT 57.725 34.615 0.00 0.00 36.82 1.28
820 822 9.877178 GGACATCCTTACCATACAGAATTATAG 57.123 37.037 0.00 0.00 0.00 1.31
821 823 9.372369 GACATCCTTACCATACAGAATTATAGC 57.628 37.037 0.00 0.00 0.00 2.97
822 824 9.105844 ACATCCTTACCATACAGAATTATAGCT 57.894 33.333 0.00 0.00 0.00 3.32
874 1243 6.425114 GCTCCTTTTCTTCCATTTTTCTTTCC 59.575 38.462 0.00 0.00 0.00 3.13
878 1247 6.762077 TTTCTTCCATTTTTCTTTCCCCAT 57.238 33.333 0.00 0.00 0.00 4.00
883 1252 4.527816 TCCATTTTTCTTTCCCCATCTGTG 59.472 41.667 0.00 0.00 0.00 3.66
904 1273 9.769677 TCTGTGTATATATATATATGGCCCCTC 57.230 37.037 20.93 8.32 31.69 4.30
911 1280 1.267121 TATATGGCCCCTCTCTTCGC 58.733 55.000 0.00 0.00 0.00 4.70
927 1296 2.030958 CGCCCCACGGTTCAGTAAC 61.031 63.158 0.00 0.00 38.44 2.50
989 1358 3.518634 TGTGGTTCAAAGGCAAAAGTC 57.481 42.857 0.00 0.00 0.00 3.01
1032 1401 3.584406 TGGATCACCTCTCTGATTTGTGT 59.416 43.478 0.00 0.00 37.04 3.72
1148 1517 8.777413 CATAATCTTCATCGGCTTATTTCTTGA 58.223 33.333 0.00 0.00 0.00 3.02
1150 1519 7.630242 ATCTTCATCGGCTTATTTCTTGAAA 57.370 32.000 0.00 0.00 0.00 2.69
1153 1522 7.336679 TCTTCATCGGCTTATTTCTTGAAATCA 59.663 33.333 11.31 1.57 0.00 2.57
1179 1548 4.697514 TCAGCTGGAGTATTATCTTGTGC 58.302 43.478 15.13 0.00 0.00 4.57
1197 1566 6.267471 TCTTGTGCAGAGATTTATGGGTTTTT 59.733 34.615 0.00 0.00 0.00 1.94
1199 1568 5.538053 TGTGCAGAGATTTATGGGTTTTTCA 59.462 36.000 0.00 0.00 0.00 2.69
1201 1570 5.047377 TGCAGAGATTTATGGGTTTTTCACC 60.047 40.000 0.00 0.00 46.46 4.02
1335 1704 2.124903 CGTCAAATCGATTCGGGGTAG 58.875 52.381 11.83 0.00 0.00 3.18
1379 1819 6.897706 ACTATCTACTCCGGGAGATAAAAC 57.102 41.667 30.13 0.00 34.92 2.43
1482 1922 1.668826 ACCCCAAGATGAGCAAGGTA 58.331 50.000 0.00 0.00 0.00 3.08
1488 1928 3.369052 CCAAGATGAGCAAGGTAACGGTA 60.369 47.826 0.00 0.00 46.39 4.02
1738 2181 1.136891 CCTGCACCGTCATGTGATCTA 59.863 52.381 0.00 0.00 38.55 1.98
1751 2194 7.538678 CGTCATGTGATCTAATCATCGTAATCA 59.461 37.037 0.00 0.00 42.04 2.57
1777 2220 1.226717 CTTCCACTCTAGCCGACGC 60.227 63.158 0.00 0.00 0.00 5.19
1782 2225 4.577246 CTCTAGCCGACGCCCAGC 62.577 72.222 0.00 0.00 34.57 4.85
1843 2286 9.394767 TGCATCACAAAGACTGTATTTGTATAT 57.605 29.630 27.06 21.00 46.37 0.86
1902 2345 0.742281 AGATGAGCTTGCGTGCGAAT 60.742 50.000 0.00 0.00 38.13 3.34
1923 2366 9.287373 GCGAATAGCTATAATATACTACTCCCT 57.713 37.037 6.68 0.00 44.04 4.20
1940 2383 9.523168 ACTACTCCCTCTGTAAGCTAATATAAG 57.477 37.037 0.00 0.00 0.00 1.73
1941 2384 9.742144 CTACTCCCTCTGTAAGCTAATATAAGA 57.258 37.037 0.00 0.00 0.00 2.10
1942 2385 8.644374 ACTCCCTCTGTAAGCTAATATAAGAG 57.356 38.462 0.00 0.00 0.00 2.85
1943 2386 8.228905 ACTCCCTCTGTAAGCTAATATAAGAGT 58.771 37.037 0.00 0.00 0.00 3.24
1944 2387 9.742144 CTCCCTCTGTAAGCTAATATAAGAGTA 57.258 37.037 0.00 0.00 0.00 2.59
2053 2496 4.096984 CGTACATAACTACTCCCTCCGTTT 59.903 45.833 0.00 0.00 0.00 3.60
2054 2497 4.732672 ACATAACTACTCCCTCCGTTTC 57.267 45.455 0.00 0.00 0.00 2.78
2055 2498 4.091549 ACATAACTACTCCCTCCGTTTCA 58.908 43.478 0.00 0.00 0.00 2.69
2057 2500 5.012354 ACATAACTACTCCCTCCGTTTCAAA 59.988 40.000 0.00 0.00 0.00 2.69
2058 2501 4.426736 AACTACTCCCTCCGTTTCAAAA 57.573 40.909 0.00 0.00 0.00 2.44
2061 2504 5.731591 ACTACTCCCTCCGTTTCAAAATAG 58.268 41.667 0.00 0.00 0.00 1.73
2062 2505 4.903045 ACTCCCTCCGTTTCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
2063 2506 5.437191 ACTCCCTCCGTTTCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
2064 2507 6.555463 ACTCCCTCCGTTTCAAAATAGATA 57.445 37.500 0.00 0.00 0.00 1.98
2065 2508 6.954232 ACTCCCTCCGTTTCAAAATAGATAA 58.046 36.000 0.00 0.00 0.00 1.75
2066 2509 7.574607 ACTCCCTCCGTTTCAAAATAGATAAT 58.425 34.615 0.00 0.00 0.00 1.28
2069 2512 6.770785 CCCTCCGTTTCAAAATAGATAATCCA 59.229 38.462 0.00 0.00 0.00 3.41
2071 2514 8.129211 CCTCCGTTTCAAAATAGATAATCCAAC 58.871 37.037 0.00 0.00 0.00 3.77
2073 2516 9.238368 TCCGTTTCAAAATAGATAATCCAACTT 57.762 29.630 0.00 0.00 0.00 2.66
2091 2928 9.729281 ATCCAACTTTATACTAAACGAAGGAAA 57.271 29.630 0.00 0.00 0.00 3.13
2126 4607 0.590230 TCTTGTTGCGCCGTTTTTCG 60.590 50.000 4.18 0.00 39.52 3.46
2130 4611 1.263484 TGTTGCGCCGTTTTTCGATTA 59.737 42.857 4.18 0.00 42.86 1.75
2145 4626 9.241317 GTTTTTCGATTATGAGATTGATGCAAT 57.759 29.630 0.00 0.00 36.72 3.56
2162 4643 5.999205 TGCAATCACCCATTTTCATACTT 57.001 34.783 0.00 0.00 0.00 2.24
2187 4668 8.021955 TCTTTCTATACAATTGCATATCAGCG 57.978 34.615 5.05 0.00 37.31 5.18
2189 4670 8.552083 TTTCTATACAATTGCATATCAGCGAT 57.448 30.769 5.05 0.00 40.31 4.58
2190 4671 8.552083 TTCTATACAATTGCATATCAGCGATT 57.448 30.769 5.05 0.00 46.81 3.34
2191 4672 8.552083 TCTATACAATTGCATATCAGCGATTT 57.448 30.769 5.05 0.00 44.22 2.17
2192 4673 8.659491 TCTATACAATTGCATATCAGCGATTTC 58.341 33.333 5.05 0.00 44.22 2.17
2193 4674 5.503662 ACAATTGCATATCAGCGATTTCA 57.496 34.783 5.05 0.00 44.22 2.69
2194 4675 5.893687 ACAATTGCATATCAGCGATTTCAA 58.106 33.333 5.05 1.28 44.22 2.69
2195 4676 5.975344 ACAATTGCATATCAGCGATTTCAAG 59.025 36.000 5.05 0.00 44.22 3.02
2196 4677 6.183360 ACAATTGCATATCAGCGATTTCAAGA 60.183 34.615 5.05 0.00 44.22 3.02
2197 4678 5.413969 TTGCATATCAGCGATTTCAAGAG 57.586 39.130 0.00 0.00 37.31 2.85
2198 4679 4.696455 TGCATATCAGCGATTTCAAGAGA 58.304 39.130 0.00 0.00 37.31 3.10
2199 4680 4.509230 TGCATATCAGCGATTTCAAGAGAC 59.491 41.667 0.00 0.00 37.31 3.36
2200 4681 4.375807 GCATATCAGCGATTTCAAGAGACG 60.376 45.833 0.00 0.00 0.00 4.18
2216 4697 3.743396 AGAGACGCTTGTGATTCTTCAAC 59.257 43.478 0.00 0.00 32.48 3.18
2220 4701 2.031769 CGCTTGTGATTCTTCAACAGCA 60.032 45.455 7.86 0.00 38.35 4.41
2235 4716 5.128205 TCAACAGCATCAATCTAATGGAGG 58.872 41.667 0.00 0.00 0.00 4.30
2240 4721 3.418995 CATCAATCTAATGGAGGCCCTG 58.581 50.000 0.00 0.00 0.00 4.45
2247 4728 1.668826 AATGGAGGCCCTGACAAGTA 58.331 50.000 0.00 0.00 0.00 2.24
2250 4731 1.273838 TGGAGGCCCTGACAAGTAGAT 60.274 52.381 0.00 0.00 0.00 1.98
2254 4735 4.156477 GAGGCCCTGACAAGTAGATCTAT 58.844 47.826 5.57 0.00 0.00 1.98
2258 4739 4.530161 GCCCTGACAAGTAGATCTATCCAT 59.470 45.833 5.57 0.00 0.00 3.41
2260 4741 5.777223 CCCTGACAAGTAGATCTATCCATGA 59.223 44.000 5.57 0.00 0.00 3.07
2271 4752 6.962182 AGATCTATCCATGAAAGACAACCAA 58.038 36.000 0.00 0.00 0.00 3.67
2279 4760 7.685481 TCCATGAAAGACAACCAACTCTTATA 58.315 34.615 0.00 0.00 0.00 0.98
2313 4794 5.219739 AGCCCTGATATTTCCTAGAACTGA 58.780 41.667 0.00 0.00 0.00 3.41
2318 4799 9.664332 CCCTGATATTTCCTAGAACTGATATTG 57.336 37.037 0.00 0.00 0.00 1.90
2387 4872 8.649973 ACCTTAGAATGATTGTCTACGATTTC 57.350 34.615 0.00 0.00 0.00 2.17
2388 4873 8.258007 ACCTTAGAATGATTGTCTACGATTTCA 58.742 33.333 0.00 0.00 0.00 2.69
2390 4875 6.595772 AGAATGATTGTCTACGATTTCAGC 57.404 37.500 0.00 0.00 0.00 4.26
2397 4887 8.443160 TGATTGTCTACGATTTCAGCTAAAAAG 58.557 33.333 0.00 0.00 0.00 2.27
2412 4902 5.763698 AGCTAAAAAGGACAACCAACTCTAC 59.236 40.000 0.00 0.00 38.94 2.59
2437 4927 9.458727 ACTGATTCTTCAACATCAATCTAATGT 57.541 29.630 0.00 0.00 38.98 2.71
2486 4976 4.225942 TGGAAGACAACCAGCTATTCATCT 59.774 41.667 0.00 0.00 33.22 2.90
2520 5010 6.942532 ATAACATAATGTAACAGGGTGCTG 57.057 37.500 0.00 0.00 0.00 4.41
2542 5032 6.330004 TGCAGCTCACTTCATTTTCAATAA 57.670 33.333 0.00 0.00 0.00 1.40
2551 5041 8.637099 TCACTTCATTTTCAATAACATGTGGAA 58.363 29.630 0.00 0.00 0.00 3.53
2557 5047 7.475771 TTTTCAATAACATGTGGAAAAGTGC 57.524 32.000 17.10 0.00 33.83 4.40
2578 5068 4.925054 TGCTGCAATTCTCAAGCATAAAAC 59.075 37.500 0.00 0.00 37.68 2.43
2596 5086 7.566868 GCATAAAACCTTCTTTTAGTTGTTGCG 60.567 37.037 0.00 0.00 0.00 4.85
2625 5115 5.923204 ACAGAGTGAACTCAAGAGATTTGT 58.077 37.500 12.76 3.11 45.21 2.83
2678 5168 6.306987 ACACTATTGTGAATTCTCCAACCTT 58.693 36.000 14.37 0.00 46.55 3.50
2693 5185 3.954258 CCAACCTTCACTCAAGAAACCTT 59.046 43.478 0.00 0.00 33.29 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 4.469586 TGTAAGCAATATGTCCAGACAGGA 59.530 41.667 6.63 0.00 45.48 3.86
43 44 4.769688 TGTAAGCAATATGTCCAGACAGG 58.230 43.478 6.63 0.00 45.48 4.00
44 45 6.051074 TCATGTAAGCAATATGTCCAGACAG 58.949 40.000 6.63 0.00 45.48 3.51
45 46 5.988287 TCATGTAAGCAATATGTCCAGACA 58.012 37.500 2.42 2.42 46.44 3.41
46 47 6.925610 TTCATGTAAGCAATATGTCCAGAC 57.074 37.500 0.00 0.00 0.00 3.51
108 109 9.098355 CCGAAAGATCAAATTGATGTTACTAGA 57.902 33.333 16.98 0.00 39.12 2.43
109 110 9.098355 TCCGAAAGATCAAATTGATGTTACTAG 57.902 33.333 16.98 9.61 39.12 2.57
110 111 9.613428 ATCCGAAAGATCAAATTGATGTTACTA 57.387 29.630 16.98 5.89 39.12 1.82
111 112 7.921786 TCCGAAAGATCAAATTGATGTTACT 57.078 32.000 16.98 4.55 39.12 2.24
116 117 9.552114 GCTATAATCCGAAAGATCAAATTGATG 57.448 33.333 13.82 0.00 37.20 3.07
117 118 9.288576 TGCTATAATCCGAAAGATCAAATTGAT 57.711 29.630 8.39 8.39 40.34 2.57
118 119 8.675705 TGCTATAATCCGAAAGATCAAATTGA 57.324 30.769 0.00 0.00 32.47 2.57
158 159 9.311916 CCAGTCAAATGTTTTTAAGTTTGATCA 57.688 29.630 0.00 0.00 41.11 2.92
159 160 9.528018 TCCAGTCAAATGTTTTTAAGTTTGATC 57.472 29.630 3.15 0.00 41.11 2.92
160 161 9.883142 TTCCAGTCAAATGTTTTTAAGTTTGAT 57.117 25.926 3.15 0.00 41.11 2.57
161 162 9.712305 TTTCCAGTCAAATGTTTTTAAGTTTGA 57.288 25.926 0.00 0.00 38.01 2.69
162 163 9.971744 CTTTCCAGTCAAATGTTTTTAAGTTTG 57.028 29.630 0.00 0.00 33.91 2.93
163 164 9.936759 TCTTTCCAGTCAAATGTTTTTAAGTTT 57.063 25.926 0.00 0.00 0.00 2.66
164 165 9.366216 GTCTTTCCAGTCAAATGTTTTTAAGTT 57.634 29.630 0.00 0.00 0.00 2.66
165 166 8.527810 TGTCTTTCCAGTCAAATGTTTTTAAGT 58.472 29.630 0.00 0.00 0.00 2.24
166 167 8.925161 TGTCTTTCCAGTCAAATGTTTTTAAG 57.075 30.769 0.00 0.00 0.00 1.85
169 170 8.695456 ACTATGTCTTTCCAGTCAAATGTTTTT 58.305 29.630 0.00 0.00 0.00 1.94
170 171 8.237811 ACTATGTCTTTCCAGTCAAATGTTTT 57.762 30.769 0.00 0.00 0.00 2.43
171 172 7.823745 ACTATGTCTTTCCAGTCAAATGTTT 57.176 32.000 0.00 0.00 0.00 2.83
172 173 8.918202 TTACTATGTCTTTCCAGTCAAATGTT 57.082 30.769 0.00 0.00 0.00 2.71
173 174 8.918202 TTTACTATGTCTTTCCAGTCAAATGT 57.082 30.769 0.00 0.00 0.00 2.71
178 179 9.667107 CCTAATTTTACTATGTCTTTCCAGTCA 57.333 33.333 0.00 0.00 0.00 3.41
179 180 9.886132 TCCTAATTTTACTATGTCTTTCCAGTC 57.114 33.333 0.00 0.00 0.00 3.51
180 181 9.668497 GTCCTAATTTTACTATGTCTTTCCAGT 57.332 33.333 0.00 0.00 0.00 4.00
181 182 9.667107 TGTCCTAATTTTACTATGTCTTTCCAG 57.333 33.333 0.00 0.00 0.00 3.86
184 185 9.937175 GCATGTCCTAATTTTACTATGTCTTTC 57.063 33.333 0.00 0.00 0.00 2.62
185 186 9.461312 TGCATGTCCTAATTTTACTATGTCTTT 57.539 29.630 0.00 0.00 0.00 2.52
186 187 9.461312 TTGCATGTCCTAATTTTACTATGTCTT 57.539 29.630 0.00 0.00 0.00 3.01
187 188 9.632638 ATTGCATGTCCTAATTTTACTATGTCT 57.367 29.630 0.00 0.00 0.00 3.41
197 198 9.603921 CCTGATTTAAATTGCATGTCCTAATTT 57.396 29.630 1.43 12.92 37.64 1.82
198 199 8.206189 CCCTGATTTAAATTGCATGTCCTAATT 58.794 33.333 1.43 0.00 0.00 1.40
199 200 7.345392 ACCCTGATTTAAATTGCATGTCCTAAT 59.655 33.333 1.43 0.00 0.00 1.73
200 201 6.667414 ACCCTGATTTAAATTGCATGTCCTAA 59.333 34.615 1.43 0.00 0.00 2.69
201 202 6.194235 ACCCTGATTTAAATTGCATGTCCTA 58.806 36.000 1.43 0.00 0.00 2.94
202 203 5.025453 ACCCTGATTTAAATTGCATGTCCT 58.975 37.500 1.43 0.00 0.00 3.85
203 204 5.343307 ACCCTGATTTAAATTGCATGTCC 57.657 39.130 1.43 0.00 0.00 4.02
204 205 7.100458 ACTACCCTGATTTAAATTGCATGTC 57.900 36.000 1.43 0.00 0.00 3.06
205 206 7.834181 AGTACTACCCTGATTTAAATTGCATGT 59.166 33.333 1.43 0.30 0.00 3.21
206 207 8.225603 AGTACTACCCTGATTTAAATTGCATG 57.774 34.615 1.43 0.00 0.00 4.06
207 208 8.823220 AAGTACTACCCTGATTTAAATTGCAT 57.177 30.769 1.43 0.00 0.00 3.96
208 209 7.885922 TGAAGTACTACCCTGATTTAAATTGCA 59.114 33.333 1.43 0.00 0.00 4.08
209 210 8.276252 TGAAGTACTACCCTGATTTAAATTGC 57.724 34.615 1.43 0.00 0.00 3.56
211 212 9.628500 GGATGAAGTACTACCCTGATTTAAATT 57.372 33.333 1.43 0.00 0.00 1.82
212 213 7.931948 CGGATGAAGTACTACCCTGATTTAAAT 59.068 37.037 0.00 0.00 0.00 1.40
213 214 7.093201 ACGGATGAAGTACTACCCTGATTTAAA 60.093 37.037 0.00 0.00 0.00 1.52
214 215 6.381994 ACGGATGAAGTACTACCCTGATTTAA 59.618 38.462 0.00 0.00 0.00 1.52
215 216 5.895534 ACGGATGAAGTACTACCCTGATTTA 59.104 40.000 0.00 0.00 0.00 1.40
216 217 4.715297 ACGGATGAAGTACTACCCTGATTT 59.285 41.667 0.00 0.00 0.00 2.17
217 218 4.287552 ACGGATGAAGTACTACCCTGATT 58.712 43.478 0.00 0.00 0.00 2.57
218 219 3.912248 ACGGATGAAGTACTACCCTGAT 58.088 45.455 0.00 0.00 0.00 2.90
219 220 3.377253 ACGGATGAAGTACTACCCTGA 57.623 47.619 0.00 0.00 0.00 3.86
220 221 4.467198 AAACGGATGAAGTACTACCCTG 57.533 45.455 0.00 0.00 0.00 4.45
221 222 7.902920 TTATAAACGGATGAAGTACTACCCT 57.097 36.000 0.00 0.00 0.00 4.34
272 273 9.512588 ACTCATTTCAATCTGAACAAAGACTAT 57.487 29.630 0.00 0.00 35.89 2.12
273 274 8.777413 CACTCATTTCAATCTGAACAAAGACTA 58.223 33.333 0.00 0.00 35.89 2.59
274 275 7.500227 TCACTCATTTCAATCTGAACAAAGACT 59.500 33.333 0.00 0.00 35.89 3.24
275 276 7.642669 TCACTCATTTCAATCTGAACAAAGAC 58.357 34.615 0.00 0.00 35.89 3.01
276 277 7.806409 TCACTCATTTCAATCTGAACAAAGA 57.194 32.000 0.00 0.00 35.89 2.52
277 278 7.916977 TGTTCACTCATTTCAATCTGAACAAAG 59.083 33.333 8.24 0.00 42.64 2.77
278 279 7.770201 TGTTCACTCATTTCAATCTGAACAAA 58.230 30.769 8.24 0.00 42.64 2.83
279 280 7.332213 TGTTCACTCATTTCAATCTGAACAA 57.668 32.000 8.24 0.00 42.64 2.83
280 281 6.940831 TGTTCACTCATTTCAATCTGAACA 57.059 33.333 6.88 6.88 43.11 3.18
281 282 7.701924 TGTTTGTTCACTCATTTCAATCTGAAC 59.298 33.333 0.00 0.00 35.89 3.18
282 283 7.701924 GTGTTTGTTCACTCATTTCAATCTGAA 59.298 33.333 0.00 0.00 33.74 3.02
283 284 7.148103 TGTGTTTGTTCACTCATTTCAATCTGA 60.148 33.333 0.00 0.00 38.90 3.27
284 285 6.974048 TGTGTTTGTTCACTCATTTCAATCTG 59.026 34.615 0.00 0.00 38.90 2.90
285 286 6.974622 GTGTGTTTGTTCACTCATTTCAATCT 59.025 34.615 0.00 0.00 38.90 2.40
286 287 6.974622 AGTGTGTTTGTTCACTCATTTCAATC 59.025 34.615 0.00 0.00 40.28 2.67
287 288 6.866480 AGTGTGTTTGTTCACTCATTTCAAT 58.134 32.000 0.00 0.00 40.28 2.57
288 289 6.266168 AGTGTGTTTGTTCACTCATTTCAA 57.734 33.333 0.00 0.00 40.28 2.69
289 290 5.895636 AGTGTGTTTGTTCACTCATTTCA 57.104 34.783 0.00 0.00 40.28 2.69
290 291 8.583765 GTTTTAGTGTGTTTGTTCACTCATTTC 58.416 33.333 1.08 0.00 42.77 2.17
291 292 8.085296 TGTTTTAGTGTGTTTGTTCACTCATTT 58.915 29.630 1.08 0.00 42.77 2.32
292 293 7.598278 TGTTTTAGTGTGTTTGTTCACTCATT 58.402 30.769 1.08 0.00 42.77 2.57
293 294 7.151999 TGTTTTAGTGTGTTTGTTCACTCAT 57.848 32.000 1.08 0.00 42.77 2.90
294 295 6.561737 TGTTTTAGTGTGTTTGTTCACTCA 57.438 33.333 1.08 0.00 42.77 3.41
295 296 9.730420 ATTATGTTTTAGTGTGTTTGTTCACTC 57.270 29.630 1.08 0.00 42.77 3.51
328 329 9.753674 TTTTAACTTTCCCTGAATCAGATGTAT 57.246 29.630 12.53 0.00 32.44 2.29
329 330 9.010029 GTTTTAACTTTCCCTGAATCAGATGTA 57.990 33.333 12.53 0.00 32.44 2.29
330 331 7.505585 TGTTTTAACTTTCCCTGAATCAGATGT 59.494 33.333 12.53 0.00 32.44 3.06
331 332 7.885297 TGTTTTAACTTTCCCTGAATCAGATG 58.115 34.615 12.53 2.62 32.44 2.90
332 333 8.655935 ATGTTTTAACTTTCCCTGAATCAGAT 57.344 30.769 12.53 0.00 32.44 2.90
333 334 7.944554 AGATGTTTTAACTTTCCCTGAATCAGA 59.055 33.333 12.53 0.00 32.44 3.27
334 335 8.115490 AGATGTTTTAACTTTCCCTGAATCAG 57.885 34.615 2.68 2.68 0.00 2.90
335 336 8.477419 AAGATGTTTTAACTTTCCCTGAATCA 57.523 30.769 0.00 0.00 0.00 2.57
337 338 8.523658 GCTAAGATGTTTTAACTTTCCCTGAAT 58.476 33.333 0.00 0.00 0.00 2.57
338 339 7.504238 TGCTAAGATGTTTTAACTTTCCCTGAA 59.496 33.333 0.00 0.00 0.00 3.02
339 340 7.001674 TGCTAAGATGTTTTAACTTTCCCTGA 58.998 34.615 0.00 0.00 0.00 3.86
340 341 7.214467 TGCTAAGATGTTTTAACTTTCCCTG 57.786 36.000 0.00 0.00 0.00 4.45
341 342 8.422577 AATGCTAAGATGTTTTAACTTTCCCT 57.577 30.769 0.00 0.00 0.00 4.20
342 343 8.925700 CAAATGCTAAGATGTTTTAACTTTCCC 58.074 33.333 0.00 0.00 0.00 3.97
343 344 9.476202 ACAAATGCTAAGATGTTTTAACTTTCC 57.524 29.630 0.00 0.00 0.00 3.13
347 348 9.683069 CTTCACAAATGCTAAGATGTTTTAACT 57.317 29.630 0.00 0.00 0.00 2.24
348 349 8.915654 CCTTCACAAATGCTAAGATGTTTTAAC 58.084 33.333 0.00 0.00 0.00 2.01
349 350 8.087750 CCCTTCACAAATGCTAAGATGTTTTAA 58.912 33.333 0.00 0.00 0.00 1.52
350 351 7.450014 TCCCTTCACAAATGCTAAGATGTTTTA 59.550 33.333 0.00 0.00 0.00 1.52
351 352 6.267471 TCCCTTCACAAATGCTAAGATGTTTT 59.733 34.615 0.00 0.00 0.00 2.43
352 353 5.774690 TCCCTTCACAAATGCTAAGATGTTT 59.225 36.000 0.00 0.00 0.00 2.83
353 354 5.324409 TCCCTTCACAAATGCTAAGATGTT 58.676 37.500 0.00 0.00 0.00 2.71
354 355 4.922206 TCCCTTCACAAATGCTAAGATGT 58.078 39.130 0.00 0.00 0.00 3.06
355 356 4.337555 CCTCCCTTCACAAATGCTAAGATG 59.662 45.833 0.00 0.00 0.00 2.90
356 357 4.530875 CCTCCCTTCACAAATGCTAAGAT 58.469 43.478 0.00 0.00 0.00 2.40
357 358 3.308402 CCCTCCCTTCACAAATGCTAAGA 60.308 47.826 0.00 0.00 0.00 2.10
358 359 3.019564 CCCTCCCTTCACAAATGCTAAG 58.980 50.000 0.00 0.00 0.00 2.18
359 360 2.647299 TCCCTCCCTTCACAAATGCTAA 59.353 45.455 0.00 0.00 0.00 3.09
360 361 2.239654 CTCCCTCCCTTCACAAATGCTA 59.760 50.000 0.00 0.00 0.00 3.49
361 362 1.005215 CTCCCTCCCTTCACAAATGCT 59.995 52.381 0.00 0.00 0.00 3.79
362 363 1.272147 ACTCCCTCCCTTCACAAATGC 60.272 52.381 0.00 0.00 0.00 3.56
363 364 2.887151 ACTCCCTCCCTTCACAAATG 57.113 50.000 0.00 0.00 0.00 2.32
364 365 5.538877 TCTATACTCCCTCCCTTCACAAAT 58.461 41.667 0.00 0.00 0.00 2.32
365 366 4.955335 TCTATACTCCCTCCCTTCACAAA 58.045 43.478 0.00 0.00 0.00 2.83
366 367 4.620086 TCTATACTCCCTCCCTTCACAA 57.380 45.455 0.00 0.00 0.00 3.33
367 368 4.834406 ATCTATACTCCCTCCCTTCACA 57.166 45.455 0.00 0.00 0.00 3.58
368 369 5.591067 CGATATCTATACTCCCTCCCTTCAC 59.409 48.000 0.34 0.00 0.00 3.18
369 370 5.253330 ACGATATCTATACTCCCTCCCTTCA 59.747 44.000 0.34 0.00 0.00 3.02
370 371 5.591067 CACGATATCTATACTCCCTCCCTTC 59.409 48.000 0.34 0.00 0.00 3.46
371 372 5.511363 CACGATATCTATACTCCCTCCCTT 58.489 45.833 0.34 0.00 0.00 3.95
372 373 4.629204 GCACGATATCTATACTCCCTCCCT 60.629 50.000 0.34 0.00 0.00 4.20
373 374 3.633065 GCACGATATCTATACTCCCTCCC 59.367 52.174 0.34 0.00 0.00 4.30
374 375 4.528920 AGCACGATATCTATACTCCCTCC 58.471 47.826 0.34 0.00 0.00 4.30
375 376 7.283580 ACAATAGCACGATATCTATACTCCCTC 59.716 40.741 0.34 0.00 0.00 4.30
376 377 7.120051 ACAATAGCACGATATCTATACTCCCT 58.880 38.462 0.34 0.00 0.00 4.20
377 378 7.336161 ACAATAGCACGATATCTATACTCCC 57.664 40.000 0.34 0.00 0.00 4.30
378 379 9.640963 AAAACAATAGCACGATATCTATACTCC 57.359 33.333 0.34 0.00 0.00 3.85
383 384 9.197694 GTCTGAAAACAATAGCACGATATCTAT 57.802 33.333 0.34 0.00 0.00 1.98
384 385 8.414003 AGTCTGAAAACAATAGCACGATATCTA 58.586 33.333 0.34 0.00 0.00 1.98
385 386 7.268586 AGTCTGAAAACAATAGCACGATATCT 58.731 34.615 0.34 0.00 0.00 1.98
386 387 7.470289 AGTCTGAAAACAATAGCACGATATC 57.530 36.000 0.00 0.00 0.00 1.63
387 388 7.849804 AAGTCTGAAAACAATAGCACGATAT 57.150 32.000 0.00 0.00 0.00 1.63
388 389 8.766000 TTAAGTCTGAAAACAATAGCACGATA 57.234 30.769 0.00 0.00 0.00 2.92
389 390 7.624344 GCTTAAGTCTGAAAACAATAGCACGAT 60.624 37.037 4.02 0.00 0.00 3.73
390 391 6.347402 GCTTAAGTCTGAAAACAATAGCACGA 60.347 38.462 4.02 0.00 0.00 4.35
391 392 5.790495 GCTTAAGTCTGAAAACAATAGCACG 59.210 40.000 4.02 0.00 0.00 5.34
392 393 5.790495 CGCTTAAGTCTGAAAACAATAGCAC 59.210 40.000 4.02 0.00 0.00 4.40
393 394 5.106712 CCGCTTAAGTCTGAAAACAATAGCA 60.107 40.000 4.02 0.00 0.00 3.49
394 395 5.106673 ACCGCTTAAGTCTGAAAACAATAGC 60.107 40.000 4.02 0.00 0.00 2.97
395 396 6.481954 ACCGCTTAAGTCTGAAAACAATAG 57.518 37.500 4.02 0.00 0.00 1.73
396 397 6.293735 CCAACCGCTTAAGTCTGAAAACAATA 60.294 38.462 4.02 0.00 0.00 1.90
397 398 5.507315 CCAACCGCTTAAGTCTGAAAACAAT 60.507 40.000 4.02 0.00 0.00 2.71
398 399 4.201970 CCAACCGCTTAAGTCTGAAAACAA 60.202 41.667 4.02 0.00 0.00 2.83
399 400 3.314080 CCAACCGCTTAAGTCTGAAAACA 59.686 43.478 4.02 0.00 0.00 2.83
400 401 3.314357 ACCAACCGCTTAAGTCTGAAAAC 59.686 43.478 4.02 0.00 0.00 2.43
401 402 3.547746 ACCAACCGCTTAAGTCTGAAAA 58.452 40.909 4.02 0.00 0.00 2.29
402 403 3.202829 ACCAACCGCTTAAGTCTGAAA 57.797 42.857 4.02 0.00 0.00 2.69
403 404 2.922740 ACCAACCGCTTAAGTCTGAA 57.077 45.000 4.02 0.00 0.00 3.02
404 405 3.069872 TGTTACCAACCGCTTAAGTCTGA 59.930 43.478 4.02 0.00 0.00 3.27
405 406 3.395639 TGTTACCAACCGCTTAAGTCTG 58.604 45.455 4.02 0.00 0.00 3.51
406 407 3.070590 ACTGTTACCAACCGCTTAAGTCT 59.929 43.478 4.02 0.00 0.00 3.24
407 408 3.396560 ACTGTTACCAACCGCTTAAGTC 58.603 45.455 4.02 0.00 0.00 3.01
408 409 3.480505 ACTGTTACCAACCGCTTAAGT 57.519 42.857 4.02 0.00 0.00 2.24
409 410 4.390909 CCTTACTGTTACCAACCGCTTAAG 59.609 45.833 0.00 0.00 0.00 1.85
410 411 4.040217 TCCTTACTGTTACCAACCGCTTAA 59.960 41.667 0.00 0.00 0.00 1.85
411 412 3.577848 TCCTTACTGTTACCAACCGCTTA 59.422 43.478 0.00 0.00 0.00 3.09
412 413 2.369532 TCCTTACTGTTACCAACCGCTT 59.630 45.455 0.00 0.00 0.00 4.68
413 414 1.972795 TCCTTACTGTTACCAACCGCT 59.027 47.619 0.00 0.00 0.00 5.52
414 415 2.460757 TCCTTACTGTTACCAACCGC 57.539 50.000 0.00 0.00 0.00 5.68
415 416 3.744426 CACTTCCTTACTGTTACCAACCG 59.256 47.826 0.00 0.00 0.00 4.44
416 417 4.514066 CACACTTCCTTACTGTTACCAACC 59.486 45.833 0.00 0.00 0.00 3.77
417 418 5.362263 TCACACTTCCTTACTGTTACCAAC 58.638 41.667 0.00 0.00 0.00 3.77
418 419 5.617528 TCACACTTCCTTACTGTTACCAA 57.382 39.130 0.00 0.00 0.00 3.67
419 420 5.617528 TTCACACTTCCTTACTGTTACCA 57.382 39.130 0.00 0.00 0.00 3.25
420 421 6.541278 ACTTTTCACACTTCCTTACTGTTACC 59.459 38.462 0.00 0.00 0.00 2.85
421 422 7.407337 CACTTTTCACACTTCCTTACTGTTAC 58.593 38.462 0.00 0.00 0.00 2.50
422 423 6.037830 GCACTTTTCACACTTCCTTACTGTTA 59.962 38.462 0.00 0.00 0.00 2.41
423 424 5.163652 GCACTTTTCACACTTCCTTACTGTT 60.164 40.000 0.00 0.00 0.00 3.16
424 425 4.335594 GCACTTTTCACACTTCCTTACTGT 59.664 41.667 0.00 0.00 0.00 3.55
425 426 4.576463 AGCACTTTTCACACTTCCTTACTG 59.424 41.667 0.00 0.00 0.00 2.74
426 427 4.781934 AGCACTTTTCACACTTCCTTACT 58.218 39.130 0.00 0.00 0.00 2.24
427 428 5.273944 CAAGCACTTTTCACACTTCCTTAC 58.726 41.667 0.00 0.00 0.00 2.34
428 429 4.338118 CCAAGCACTTTTCACACTTCCTTA 59.662 41.667 0.00 0.00 0.00 2.69
429 430 3.131046 CCAAGCACTTTTCACACTTCCTT 59.869 43.478 0.00 0.00 0.00 3.36
430 431 2.689983 CCAAGCACTTTTCACACTTCCT 59.310 45.455 0.00 0.00 0.00 3.36
431 432 2.427095 ACCAAGCACTTTTCACACTTCC 59.573 45.455 0.00 0.00 0.00 3.46
432 433 3.378427 AGACCAAGCACTTTTCACACTTC 59.622 43.478 0.00 0.00 0.00 3.01
433 434 3.356290 AGACCAAGCACTTTTCACACTT 58.644 40.909 0.00 0.00 0.00 3.16
434 435 2.945668 GAGACCAAGCACTTTTCACACT 59.054 45.455 0.00 0.00 0.00 3.55
435 436 2.286418 CGAGACCAAGCACTTTTCACAC 60.286 50.000 0.00 0.00 0.00 3.82
436 437 1.939934 CGAGACCAAGCACTTTTCACA 59.060 47.619 0.00 0.00 0.00 3.58
437 438 1.264288 CCGAGACCAAGCACTTTTCAC 59.736 52.381 0.00 0.00 0.00 3.18
438 439 1.140052 TCCGAGACCAAGCACTTTTCA 59.860 47.619 0.00 0.00 0.00 2.69
439 440 1.801178 CTCCGAGACCAAGCACTTTTC 59.199 52.381 0.00 0.00 0.00 2.29
440 441 1.416401 TCTCCGAGACCAAGCACTTTT 59.584 47.619 0.00 0.00 0.00 2.27
441 442 1.048601 TCTCCGAGACCAAGCACTTT 58.951 50.000 0.00 0.00 0.00 2.66
442 443 0.318762 GTCTCCGAGACCAAGCACTT 59.681 55.000 16.58 0.00 39.28 3.16
443 444 0.827925 TGTCTCCGAGACCAAGCACT 60.828 55.000 23.01 0.00 44.44 4.40
444 445 0.389166 CTGTCTCCGAGACCAAGCAC 60.389 60.000 23.01 0.64 44.44 4.40
445 446 0.539669 TCTGTCTCCGAGACCAAGCA 60.540 55.000 23.01 5.88 44.44 3.91
446 447 0.172352 CTCTGTCTCCGAGACCAAGC 59.828 60.000 23.01 1.44 44.44 4.01
447 448 1.540267 ACTCTGTCTCCGAGACCAAG 58.460 55.000 23.01 20.62 44.44 3.61
448 449 2.873094 TACTCTGTCTCCGAGACCAA 57.127 50.000 23.01 11.72 44.44 3.67
449 450 2.873094 TTACTCTGTCTCCGAGACCA 57.127 50.000 23.01 10.72 44.44 4.02
450 451 3.280295 TGATTACTCTGTCTCCGAGACC 58.720 50.000 23.01 7.88 44.44 3.85
451 452 4.966965 TTGATTACTCTGTCTCCGAGAC 57.033 45.455 19.93 19.93 45.26 3.36
452 453 6.531503 AAATTGATTACTCTGTCTCCGAGA 57.468 37.500 0.00 0.00 32.87 4.04
453 454 7.484975 ACTAAATTGATTACTCTGTCTCCGAG 58.515 38.462 0.00 0.00 34.70 4.63
454 455 7.406031 ACTAAATTGATTACTCTGTCTCCGA 57.594 36.000 0.00 0.00 0.00 4.55
455 456 7.648510 GGTACTAAATTGATTACTCTGTCTCCG 59.351 40.741 0.00 0.00 0.00 4.63
456 457 7.927092 GGGTACTAAATTGATTACTCTGTCTCC 59.073 40.741 0.00 0.00 0.00 3.71
457 458 8.697292 AGGGTACTAAATTGATTACTCTGTCTC 58.303 37.037 0.00 0.00 0.00 3.36
458 459 8.611051 AGGGTACTAAATTGATTACTCTGTCT 57.389 34.615 0.00 0.00 0.00 3.41
459 460 7.648510 CGAGGGTACTAAATTGATTACTCTGTC 59.351 40.741 0.00 0.00 0.00 3.51
460 461 7.490000 CGAGGGTACTAAATTGATTACTCTGT 58.510 38.462 0.00 0.00 0.00 3.41
461 462 6.421202 GCGAGGGTACTAAATTGATTACTCTG 59.579 42.308 0.00 0.00 0.00 3.35
462 463 6.097839 TGCGAGGGTACTAAATTGATTACTCT 59.902 38.462 0.00 0.00 0.00 3.24
463 464 6.278363 TGCGAGGGTACTAAATTGATTACTC 58.722 40.000 0.00 0.00 0.00 2.59
464 465 6.229936 TGCGAGGGTACTAAATTGATTACT 57.770 37.500 0.00 0.00 0.00 2.24
465 466 6.913873 TTGCGAGGGTACTAAATTGATTAC 57.086 37.500 0.00 0.00 0.00 1.89
466 467 7.925043 TTTTGCGAGGGTACTAAATTGATTA 57.075 32.000 0.00 0.00 0.00 1.75
467 468 6.827586 TTTTGCGAGGGTACTAAATTGATT 57.172 33.333 0.00 0.00 0.00 2.57
468 469 6.827586 TTTTTGCGAGGGTACTAAATTGAT 57.172 33.333 0.00 0.00 0.00 2.57
507 508 9.919348 GTTCGTTTGAAAAAGTACATGTACTAA 57.081 29.630 33.12 22.16 39.49 2.24
508 509 9.096160 TGTTCGTTTGAAAAAGTACATGTACTA 57.904 29.630 33.12 18.05 39.49 1.82
509 510 7.976826 TGTTCGTTTGAAAAAGTACATGTACT 58.023 30.769 28.97 28.97 40.89 2.73
510 511 8.603983 TTGTTCGTTTGAAAAAGTACATGTAC 57.396 30.769 25.51 25.51 35.46 2.90
512 513 9.228636 GTATTGTTCGTTTGAAAAAGTACATGT 57.771 29.630 2.69 2.69 34.85 3.21
513 514 9.227490 TGTATTGTTCGTTTGAAAAAGTACATG 57.773 29.630 0.00 0.00 34.85 3.21
514 515 9.228636 GTGTATTGTTCGTTTGAAAAAGTACAT 57.771 29.630 0.00 0.00 34.85 2.29
515 516 8.452534 AGTGTATTGTTCGTTTGAAAAAGTACA 58.547 29.630 0.00 0.00 34.85 2.90
516 517 8.730427 CAGTGTATTGTTCGTTTGAAAAAGTAC 58.270 33.333 0.00 0.00 34.85 2.73
517 518 8.666573 TCAGTGTATTGTTCGTTTGAAAAAGTA 58.333 29.630 0.00 0.00 34.85 2.24
518 519 7.531716 TCAGTGTATTGTTCGTTTGAAAAAGT 58.468 30.769 0.00 0.00 34.85 2.66
519 520 7.962934 TCAGTGTATTGTTCGTTTGAAAAAG 57.037 32.000 0.00 0.00 34.85 2.27
520 521 7.008810 GCTTCAGTGTATTGTTCGTTTGAAAAA 59.991 33.333 0.00 0.00 35.81 1.94
521 522 6.470877 GCTTCAGTGTATTGTTCGTTTGAAAA 59.529 34.615 0.00 0.00 35.46 2.29
522 523 5.968848 GCTTCAGTGTATTGTTCGTTTGAAA 59.031 36.000 0.00 0.00 35.46 2.69
523 524 5.065346 TGCTTCAGTGTATTGTTCGTTTGAA 59.935 36.000 0.00 0.00 0.00 2.69
524 525 4.572795 TGCTTCAGTGTATTGTTCGTTTGA 59.427 37.500 0.00 0.00 0.00 2.69
525 526 4.670621 GTGCTTCAGTGTATTGTTCGTTTG 59.329 41.667 0.00 0.00 0.00 2.93
526 527 4.334203 TGTGCTTCAGTGTATTGTTCGTTT 59.666 37.500 0.00 0.00 0.00 3.60
527 528 3.874543 TGTGCTTCAGTGTATTGTTCGTT 59.125 39.130 0.00 0.00 0.00 3.85
528 529 3.462982 TGTGCTTCAGTGTATTGTTCGT 58.537 40.909 0.00 0.00 0.00 3.85
529 530 4.457810 CTTGTGCTTCAGTGTATTGTTCG 58.542 43.478 0.00 0.00 0.00 3.95
530 531 4.222114 GCTTGTGCTTCAGTGTATTGTTC 58.778 43.478 0.00 0.00 36.03 3.18
531 532 4.228912 GCTTGTGCTTCAGTGTATTGTT 57.771 40.909 0.00 0.00 36.03 2.83
532 533 3.904136 GCTTGTGCTTCAGTGTATTGT 57.096 42.857 0.00 0.00 36.03 2.71
545 546 6.094048 TGGAGATATTTGTTTCTAGCTTGTGC 59.906 38.462 0.00 0.00 40.05 4.57
546 547 7.615582 TGGAGATATTTGTTTCTAGCTTGTG 57.384 36.000 0.00 0.00 0.00 3.33
547 548 8.049117 TCATGGAGATATTTGTTTCTAGCTTGT 58.951 33.333 0.00 0.00 0.00 3.16
548 549 8.442632 TCATGGAGATATTTGTTTCTAGCTTG 57.557 34.615 0.00 0.00 0.00 4.01
549 550 8.897752 GTTCATGGAGATATTTGTTTCTAGCTT 58.102 33.333 0.00 0.00 0.00 3.74
550 551 7.500559 GGTTCATGGAGATATTTGTTTCTAGCT 59.499 37.037 0.00 0.00 0.00 3.32
551 552 7.519008 CGGTTCATGGAGATATTTGTTTCTAGC 60.519 40.741 0.00 0.00 0.00 3.42
552 553 7.710907 TCGGTTCATGGAGATATTTGTTTCTAG 59.289 37.037 0.00 0.00 0.00 2.43
553 554 7.561251 TCGGTTCATGGAGATATTTGTTTCTA 58.439 34.615 0.00 0.00 0.00 2.10
554 555 6.414732 TCGGTTCATGGAGATATTTGTTTCT 58.585 36.000 0.00 0.00 0.00 2.52
555 556 6.677781 TCGGTTCATGGAGATATTTGTTTC 57.322 37.500 0.00 0.00 0.00 2.78
556 557 7.461182 TTTCGGTTCATGGAGATATTTGTTT 57.539 32.000 0.00 0.00 0.00 2.83
557 558 7.393234 TCTTTTCGGTTCATGGAGATATTTGTT 59.607 33.333 0.00 0.00 0.00 2.83
558 559 6.884295 TCTTTTCGGTTCATGGAGATATTTGT 59.116 34.615 0.00 0.00 0.00 2.83
559 560 7.066284 AGTCTTTTCGGTTCATGGAGATATTTG 59.934 37.037 0.00 0.00 0.00 2.32
560 561 7.112779 AGTCTTTTCGGTTCATGGAGATATTT 58.887 34.615 0.00 0.00 0.00 1.40
561 562 6.653989 AGTCTTTTCGGTTCATGGAGATATT 58.346 36.000 0.00 0.00 0.00 1.28
562 563 6.240549 AGTCTTTTCGGTTCATGGAGATAT 57.759 37.500 0.00 0.00 0.00 1.63
563 564 5.677319 AGTCTTTTCGGTTCATGGAGATA 57.323 39.130 0.00 0.00 0.00 1.98
564 565 4.559862 AGTCTTTTCGGTTCATGGAGAT 57.440 40.909 0.00 0.00 0.00 2.75
565 566 4.527038 AGTAGTCTTTTCGGTTCATGGAGA 59.473 41.667 0.00 0.00 0.00 3.71
566 567 4.822026 AGTAGTCTTTTCGGTTCATGGAG 58.178 43.478 0.00 0.00 0.00 3.86
567 568 4.884668 AGTAGTCTTTTCGGTTCATGGA 57.115 40.909 0.00 0.00 0.00 3.41
568 569 5.721232 AGTAGTAGTCTTTTCGGTTCATGG 58.279 41.667 0.00 0.00 0.00 3.66
569 570 8.928270 ATTAGTAGTAGTCTTTTCGGTTCATG 57.072 34.615 0.00 0.00 0.00 3.07
597 598 8.640063 AGCTGGATGATTTGCATACATATTTA 57.360 30.769 0.00 0.00 46.56 1.40
600 602 6.150641 GTGAGCTGGATGATTTGCATACATAT 59.849 38.462 0.00 0.00 46.56 1.78
607 609 1.466856 GGTGAGCTGGATGATTTGCA 58.533 50.000 0.00 0.00 0.00 4.08
674 676 1.078759 GCTCAACGATGGACCAGTCG 61.079 60.000 18.73 18.73 43.13 4.18
677 679 0.742281 CCTGCTCAACGATGGACCAG 60.742 60.000 0.00 0.00 0.00 4.00
690 692 1.941999 GCTGGGCAAACATCCTGCTC 61.942 60.000 0.00 0.00 42.36 4.26
818 820 1.628340 TCCTGTTTGGCTTGCTAGCTA 59.372 47.619 19.45 11.31 46.90 3.32
821 823 2.485814 GTCTTCCTGTTTGGCTTGCTAG 59.514 50.000 0.00 0.00 35.26 3.42
822 824 2.504367 GTCTTCCTGTTTGGCTTGCTA 58.496 47.619 0.00 0.00 35.26 3.49
837 1206 0.667792 AAAGGAGCTGACGCGTCTTC 60.668 55.000 36.27 28.22 42.32 2.87
878 1247 9.769677 GAGGGGCCATATATATATATACACAGA 57.230 37.037 13.52 0.00 0.00 3.41
891 1260 1.834263 GCGAAGAGAGGGGCCATATAT 59.166 52.381 4.39 0.00 0.00 0.86
892 1261 1.267121 GCGAAGAGAGGGGCCATATA 58.733 55.000 4.39 0.00 0.00 0.86
893 1262 1.484444 GGCGAAGAGAGGGGCCATAT 61.484 60.000 4.39 0.00 44.91 1.78
894 1263 2.140792 GGCGAAGAGAGGGGCCATA 61.141 63.158 4.39 0.00 44.91 2.74
895 1264 3.483869 GGCGAAGAGAGGGGCCAT 61.484 66.667 4.39 0.00 44.91 4.40
902 1271 2.837371 GAACCGTGGGGCGAAGAGAG 62.837 65.000 0.00 0.00 44.77 3.20
904 1273 2.434359 GAACCGTGGGGCGAAGAG 60.434 66.667 0.00 0.00 44.77 2.85
911 1280 4.707791 GGTTACTGAACCGTGGGG 57.292 61.111 0.00 0.00 45.73 4.96
927 1296 0.512952 CGAGGCGAAGTGTTCTTTGG 59.487 55.000 0.00 0.00 36.02 3.28
932 1301 3.119096 GGGCGAGGCGAAGTGTTC 61.119 66.667 0.00 0.00 0.00 3.18
989 1358 2.528743 GCGCCCATGATCTCACACG 61.529 63.158 0.00 0.00 0.00 4.49
1032 1401 2.176045 TCCTTTGTCTCCGTCATGCTA 58.824 47.619 0.00 0.00 0.00 3.49
1126 1495 7.630242 TTTCAAGAAATAAGCCGATGAAGAT 57.370 32.000 0.00 0.00 0.00 2.40
1128 1497 7.475015 TGATTTCAAGAAATAAGCCGATGAAG 58.525 34.615 7.94 0.00 40.77 3.02
1148 1517 8.270744 AGATAATACTCCAGCTGAAACTGATTT 58.729 33.333 17.39 1.13 40.25 2.17
1150 1519 7.372260 AGATAATACTCCAGCTGAAACTGAT 57.628 36.000 17.39 0.00 40.25 2.90
1153 1522 6.820656 CACAAGATAATACTCCAGCTGAAACT 59.179 38.462 17.39 0.00 0.00 2.66
1197 1566 0.880278 GCAGCTCAACAGAACGGTGA 60.880 55.000 0.00 0.00 0.00 4.02
1199 1568 0.679505 TAGCAGCTCAACAGAACGGT 59.320 50.000 0.00 0.00 0.00 4.83
1201 1570 2.341257 ACATAGCAGCTCAACAGAACG 58.659 47.619 0.00 0.00 0.00 3.95
1205 1574 2.600420 CACGTACATAGCAGCTCAACAG 59.400 50.000 0.00 0.00 0.00 3.16
1379 1819 6.148948 TCGCTCAATCAAATTTACACCAAAG 58.851 36.000 0.00 0.00 0.00 2.77
1548 1991 1.511305 CACGTACGGCCACATCTCT 59.489 57.895 21.06 0.00 0.00 3.10
1575 2018 2.132352 GTAGGGGTAGGTGGCGAGG 61.132 68.421 0.00 0.00 0.00 4.63
1738 2181 3.389329 AGGAGCTGGTGATTACGATGATT 59.611 43.478 0.00 0.00 0.00 2.57
1751 2194 1.859302 CTAGAGTGGAAGGAGCTGGT 58.141 55.000 0.00 0.00 0.00 4.00
1856 2299 0.407918 ATCCCCTTTTCCCAAGCGAA 59.592 50.000 0.00 0.00 0.00 4.70
1886 2329 1.695893 GCTATTCGCACGCAAGCTCA 61.696 55.000 0.00 0.00 45.62 4.26
1916 2359 9.742144 CTCTTATATTAGCTTACAGAGGGAGTA 57.258 37.037 0.00 0.00 0.00 2.59
1917 2360 8.228905 ACTCTTATATTAGCTTACAGAGGGAGT 58.771 37.037 0.00 0.00 32.21 3.85
1918 2361 8.644374 ACTCTTATATTAGCTTACAGAGGGAG 57.356 38.462 0.00 0.00 32.21 4.30
1984 2427 8.947055 TCTTTGTAGTACTTTTTCCGTAAACT 57.053 30.769 0.00 0.00 0.00 2.66
1985 2428 9.986833 TTTCTTTGTAGTACTTTTTCCGTAAAC 57.013 29.630 0.00 0.00 0.00 2.01
1987 2430 9.598517 TCTTTCTTTGTAGTACTTTTTCCGTAA 57.401 29.630 0.00 0.00 0.00 3.18
1988 2431 9.252962 CTCTTTCTTTGTAGTACTTTTTCCGTA 57.747 33.333 0.00 0.00 0.00 4.02
1989 2432 7.254692 GCTCTTTCTTTGTAGTACTTTTTCCGT 60.255 37.037 0.00 0.00 0.00 4.69
1990 2433 7.041984 AGCTCTTTCTTTGTAGTACTTTTTCCG 60.042 37.037 0.00 0.00 0.00 4.30
1991 2434 8.155821 AGCTCTTTCTTTGTAGTACTTTTTCC 57.844 34.615 0.00 0.00 0.00 3.13
1995 2438 9.833917 ACTTTAGCTCTTTCTTTGTAGTACTTT 57.166 29.630 0.00 0.00 0.00 2.66
1996 2439 9.833917 AACTTTAGCTCTTTCTTTGTAGTACTT 57.166 29.630 0.00 0.00 0.00 2.24
1997 2440 9.833917 AAACTTTAGCTCTTTCTTTGTAGTACT 57.166 29.630 0.00 0.00 0.00 2.73
2044 2487 6.770785 TGGATTATCTATTTTGAAACGGAGGG 59.229 38.462 0.00 0.00 0.00 4.30
2064 2507 9.729281 TTCCTTCGTTTAGTATAAAGTTGGATT 57.271 29.630 0.00 0.00 0.00 3.01
2065 2508 9.729281 TTTCCTTCGTTTAGTATAAAGTTGGAT 57.271 29.630 0.00 0.00 0.00 3.41
2066 2509 9.729281 ATTTCCTTCGTTTAGTATAAAGTTGGA 57.271 29.630 0.00 0.00 0.00 3.53
2077 2520 7.307811 GCTTCACACTTATTTCCTTCGTTTAGT 60.308 37.037 0.00 0.00 0.00 2.24
2078 2521 7.015877 GCTTCACACTTATTTCCTTCGTTTAG 58.984 38.462 0.00 0.00 0.00 1.85
2079 2522 6.483974 TGCTTCACACTTATTTCCTTCGTTTA 59.516 34.615 0.00 0.00 0.00 2.01
2080 2523 5.298276 TGCTTCACACTTATTTCCTTCGTTT 59.702 36.000 0.00 0.00 0.00 3.60
2081 2524 4.819630 TGCTTCACACTTATTTCCTTCGTT 59.180 37.500 0.00 0.00 0.00 3.85
2105 2942 1.451651 GAAAAACGGCGCAACAAGATG 59.548 47.619 10.83 0.00 0.00 2.90
2106 2943 1.766069 GAAAAACGGCGCAACAAGAT 58.234 45.000 10.83 0.00 0.00 2.40
2107 2944 0.590230 CGAAAAACGGCGCAACAAGA 60.590 50.000 10.83 0.00 38.46 3.02
2108 2945 0.590230 TCGAAAAACGGCGCAACAAG 60.590 50.000 10.83 0.00 42.82 3.16
2109 2946 0.029567 ATCGAAAAACGGCGCAACAA 59.970 45.000 10.83 0.00 42.82 2.83
2111 2948 1.953113 TAATCGAAAAACGGCGCAAC 58.047 45.000 10.83 0.00 42.82 4.17
2112 2949 2.159824 TCATAATCGAAAAACGGCGCAA 59.840 40.909 10.83 0.00 42.82 4.85
2113 2950 1.732809 TCATAATCGAAAAACGGCGCA 59.267 42.857 10.83 0.00 42.82 6.09
2162 4643 7.872483 TCGCTGATATGCAATTGTATAGAAAGA 59.128 33.333 19.09 12.38 0.00 2.52
2193 4674 3.995199 TGAAGAATCACAAGCGTCTCTT 58.005 40.909 0.00 0.00 34.78 2.85
2194 4675 3.667497 TGAAGAATCACAAGCGTCTCT 57.333 42.857 0.00 0.00 0.00 3.10
2195 4676 3.494626 TGTTGAAGAATCACAAGCGTCTC 59.505 43.478 0.00 0.00 34.61 3.36
2196 4677 3.466836 TGTTGAAGAATCACAAGCGTCT 58.533 40.909 0.00 0.00 34.61 4.18
2197 4678 3.803555 CTGTTGAAGAATCACAAGCGTC 58.196 45.455 0.00 0.00 34.61 5.19
2198 4679 2.031682 GCTGTTGAAGAATCACAAGCGT 60.032 45.455 0.00 0.00 35.63 5.07
2199 4680 2.031769 TGCTGTTGAAGAATCACAAGCG 60.032 45.455 7.17 0.00 42.88 4.68
2200 4681 3.631145 TGCTGTTGAAGAATCACAAGC 57.369 42.857 5.43 5.43 41.46 4.01
2201 4682 5.366829 TGATGCTGTTGAAGAATCACAAG 57.633 39.130 0.00 0.00 44.85 3.16
2206 4687 7.861372 CCATTAGATTGATGCTGTTGAAGAATC 59.139 37.037 0.00 0.00 41.04 2.52
2207 4688 7.558807 TCCATTAGATTGATGCTGTTGAAGAAT 59.441 33.333 0.00 0.00 0.00 2.40
2208 4689 6.885918 TCCATTAGATTGATGCTGTTGAAGAA 59.114 34.615 0.00 0.00 0.00 2.52
2209 4690 6.417258 TCCATTAGATTGATGCTGTTGAAGA 58.583 36.000 0.00 0.00 0.00 2.87
2216 4697 2.818432 GGCCTCCATTAGATTGATGCTG 59.182 50.000 0.00 0.00 0.00 4.41
2220 4701 3.073650 GTCAGGGCCTCCATTAGATTGAT 59.926 47.826 0.95 0.00 34.83 2.57
2235 4716 3.898123 TGGATAGATCTACTTGTCAGGGC 59.102 47.826 4.10 0.00 0.00 5.19
2240 4721 8.417106 TGTCTTTCATGGATAGATCTACTTGTC 58.583 37.037 4.10 0.00 0.00 3.18
2247 4728 6.566079 TGGTTGTCTTTCATGGATAGATCT 57.434 37.500 0.00 0.00 0.00 2.75
2250 4731 6.013379 AGAGTTGGTTGTCTTTCATGGATAGA 60.013 38.462 0.00 0.00 0.00 1.98
2254 4735 4.437682 AGAGTTGGTTGTCTTTCATGGA 57.562 40.909 0.00 0.00 0.00 3.41
2371 4856 7.899178 TTTTAGCTGAAATCGTAGACAATCA 57.101 32.000 0.00 0.00 42.51 2.57
2372 4857 7.905493 CCTTTTTAGCTGAAATCGTAGACAATC 59.095 37.037 4.30 0.00 42.51 2.67
2378 4863 6.721571 TGTCCTTTTTAGCTGAAATCGTAG 57.278 37.500 4.30 0.00 0.00 3.51
2379 4864 6.072893 GGTTGTCCTTTTTAGCTGAAATCGTA 60.073 38.462 4.30 0.00 0.00 3.43
2380 4865 5.278315 GGTTGTCCTTTTTAGCTGAAATCGT 60.278 40.000 4.30 0.00 0.00 3.73
2381 4866 5.154222 GGTTGTCCTTTTTAGCTGAAATCG 58.846 41.667 4.30 0.00 0.00 3.34
2382 4867 6.084326 TGGTTGTCCTTTTTAGCTGAAATC 57.916 37.500 4.30 0.00 34.23 2.17
2384 4869 5.420739 AGTTGGTTGTCCTTTTTAGCTGAAA 59.579 36.000 0.00 0.00 34.23 2.69
2387 4872 4.580580 AGAGTTGGTTGTCCTTTTTAGCTG 59.419 41.667 0.00 0.00 34.23 4.24
2388 4873 4.793201 AGAGTTGGTTGTCCTTTTTAGCT 58.207 39.130 0.00 0.00 34.23 3.32
2390 4875 6.990349 TCAGTAGAGTTGGTTGTCCTTTTTAG 59.010 38.462 0.00 0.00 34.23 1.85
2397 4887 5.153950 AGAATCAGTAGAGTTGGTTGTCC 57.846 43.478 0.00 0.00 0.00 4.02
2436 4926 1.673923 GGTCCACTTGTTAGGGCGTAC 60.674 57.143 0.00 0.00 0.00 3.67
2437 4927 0.609662 GGTCCACTTGTTAGGGCGTA 59.390 55.000 0.00 0.00 0.00 4.42
2520 5010 6.151691 TGTTATTGAAAATGAAGTGAGCTGC 58.848 36.000 0.00 0.00 0.00 5.25
2542 5032 1.401761 TGCAGCACTTTTCCACATGT 58.598 45.000 0.00 0.00 0.00 3.21
2551 5041 2.363038 TGCTTGAGAATTGCAGCACTTT 59.637 40.909 0.00 0.00 32.55 2.66
2557 5047 5.717119 AGGTTTTATGCTTGAGAATTGCAG 58.283 37.500 0.00 0.00 40.18 4.41
2578 5068 2.034053 TGCCGCAACAACTAAAAGAAGG 59.966 45.455 0.00 0.00 0.00 3.46
2587 5077 0.534877 TCTGTCATGCCGCAACAACT 60.535 50.000 0.00 0.00 0.00 3.16
2596 5086 2.462456 TGAGTTCACTCTGTCATGCC 57.538 50.000 8.41 0.00 43.25 4.40
2710 5202 3.473647 TCCCAGCAGGCGAGGATG 61.474 66.667 7.27 0.00 34.51 3.51
2711 5203 3.474570 GTCCCAGCAGGCGAGGAT 61.475 66.667 8.27 0.00 34.51 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.