Multiple sequence alignment - TraesCS3A01G204500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G204500 chr3A 100.000 6946 0 0 1 6946 359083547 359076602 0.000000e+00 12827.0
1 TraesCS3A01G204500 chr3A 85.789 1337 105 35 1853 3167 742614903 742613630 0.000000e+00 1338.0
2 TraesCS3A01G204500 chr3A 85.393 1335 115 33 1853 3167 742768923 742767649 0.000000e+00 1312.0
3 TraesCS3A01G204500 chr3A 83.386 951 97 27 3927 4832 742767464 742766530 0.000000e+00 824.0
4 TraesCS3A01G204500 chr3A 88.975 517 43 9 5734 6246 742612223 742611717 1.640000e-175 627.0
5 TraesCS3A01G204500 chr3A 87.430 533 52 11 5728 6251 742766197 742765671 3.590000e-167 599.0
6 TraesCS3A01G204500 chr3A 86.051 552 54 14 3927 4470 742613447 742612911 7.820000e-159 571.0
7 TraesCS3A01G204500 chr3A 89.406 387 25 9 4540 4910 742612872 742612486 2.270000e-129 473.0
8 TraesCS3A01G204500 chr3A 93.258 89 6 0 1147 1235 742770078 742769990 1.570000e-26 132.0
9 TraesCS3A01G204500 chr3A 95.946 74 3 0 1162 1235 742616982 742616909 3.400000e-23 121.0
10 TraesCS3A01G204500 chr3A 90.000 70 7 0 6373 6442 742611714 742611645 2.670000e-14 91.6
11 TraesCS3A01G204500 chr3D 95.867 3968 92 22 1718 5678 274337936 274341838 0.000000e+00 6353.0
12 TraesCS3A01G204500 chr3D 85.704 1336 106 36 1853 3167 609169530 609168259 0.000000e+00 1330.0
13 TraesCS3A01G204500 chr3D 94.032 821 24 6 925 1731 274336978 274337787 0.000000e+00 1221.0
14 TraesCS3A01G204500 chr3D 84.128 1342 117 47 1853 3167 609215927 609214655 0.000000e+00 1210.0
15 TraesCS3A01G204500 chr3D 84.215 1172 129 31 3967 5100 609555797 609556950 0.000000e+00 1088.0
16 TraesCS3A01G204500 chr3D 85.759 955 95 22 3905 4832 609214265 609213325 0.000000e+00 972.0
17 TraesCS3A01G204500 chr3D 96.241 532 15 2 5717 6248 274341833 274342359 0.000000e+00 867.0
18 TraesCS3A01G204500 chr3D 88.889 531 46 11 5728 6251 609212966 609212442 5.870000e-180 641.0
19 TraesCS3A01G204500 chr3D 88.781 517 44 8 5734 6246 609166832 609166326 7.650000e-174 621.0
20 TraesCS3A01G204500 chr3D 85.870 552 55 14 3927 4470 609168070 609167534 3.640000e-157 566.0
21 TraesCS3A01G204500 chr3D 89.633 463 20 6 6497 6946 274342523 274342970 1.310000e-156 564.0
22 TraesCS3A01G204500 chr3D 88.630 387 28 9 4540 4910 609167495 609167109 2.280000e-124 457.0
23 TraesCS3A01G204500 chr3D 79.448 326 35 14 6380 6698 609212440 609212140 1.180000e-47 202.0
24 TraesCS3A01G204500 chr3D 88.591 149 8 3 6372 6512 274342358 274342505 9.260000e-39 172.0
25 TraesCS3A01G204500 chr3D 81.905 210 22 8 3788 3995 609555238 609555433 5.570000e-36 163.0
26 TraesCS3A01G204500 chr3D 94.382 89 5 0 1147 1235 609171623 609171535 3.380000e-28 137.0
27 TraesCS3A01G204500 chr3B 95.690 3202 65 14 1729 4908 359227757 359224607 0.000000e+00 5081.0
28 TraesCS3A01G204500 chr3B 84.893 1357 110 43 1853 3167 819899664 819898361 0.000000e+00 1282.0
29 TraesCS3A01G204500 chr3B 94.907 805 24 6 925 1716 359228687 359227887 0.000000e+00 1243.0
30 TraesCS3A01G204500 chr3B 93.426 791 35 4 4888 5678 359224426 359223653 0.000000e+00 1157.0
31 TraesCS3A01G204500 chr3B 85.075 1005 104 25 3927 4903 819931605 819930619 0.000000e+00 983.0
32 TraesCS3A01G204500 chr3B 81.672 1244 122 53 2107 3337 819932804 819931654 0.000000e+00 937.0
33 TraesCS3A01G204500 chr3B 95.677 532 15 3 5717 6248 359223658 359223135 0.000000e+00 848.0
34 TraesCS3A01G204500 chr3B 89.060 585 29 12 6375 6946 359223133 359222571 0.000000e+00 693.0
35 TraesCS3A01G204500 chr3B 88.051 544 46 9 3935 4470 819898170 819897638 1.640000e-175 627.0
36 TraesCS3A01G204500 chr3B 87.097 527 55 8 5731 6250 819896926 819896406 1.000000e-162 584.0
37 TraesCS3A01G204500 chr3B 84.402 468 49 14 5731 6180 819930300 819929839 8.270000e-119 438.0
38 TraesCS3A01G204500 chr3B 87.339 387 33 9 4540 4910 819897598 819897212 4.980000e-116 429.0
39 TraesCS3A01G204500 chr3B 91.353 266 17 3 1853 2113 819933094 819932830 6.620000e-95 359.0
40 TraesCS3A01G204500 chr3B 95.506 89 4 0 1147 1235 819901639 819901551 7.260000e-30 143.0
41 TraesCS3A01G204500 chr3B 95.062 81 4 0 6170 6250 819929802 819929722 2.030000e-25 128.0
42 TraesCS3A01G204500 chr3B 87.324 71 6 2 6373 6443 819929724 819929657 2.080000e-10 78.7
43 TraesCS3A01G204500 chr6D 92.356 641 45 4 3 641 303614665 303614027 0.000000e+00 909.0
44 TraesCS3A01G204500 chr6D 92.308 637 46 3 3 637 131934031 131933396 0.000000e+00 902.0
45 TraesCS3A01G204500 chr6D 83.422 187 20 6 716 892 399222105 399222290 5.570000e-36 163.0
46 TraesCS3A01G204500 chr2D 92.465 637 44 4 3 637 314366772 314367406 0.000000e+00 907.0
47 TraesCS3A01G204500 chr2D 88.068 176 16 3 722 895 573826068 573826240 3.280000e-48 204.0
48 TraesCS3A01G204500 chr5D 92.068 643 48 3 3 643 482814422 482815063 0.000000e+00 902.0
49 TraesCS3A01G204500 chr5D 85.556 180 16 5 722 892 421386345 421386167 5.540000e-41 180.0
50 TraesCS3A01G204500 chr5D 96.825 63 2 0 1161 1223 346876510 346876572 9.530000e-19 106.0
51 TraesCS3A01G204500 chr4D 92.296 636 47 2 3 637 486777114 486776480 0.000000e+00 902.0
52 TraesCS3A01G204500 chr4D 86.628 172 19 3 722 892 481179570 481179402 3.310000e-43 187.0
53 TraesCS3A01G204500 chr7D 91.783 645 50 3 3 645 188544939 188544296 0.000000e+00 894.0
54 TraesCS3A01G204500 chr7D 83.422 187 21 5 716 893 34736027 34736212 1.550000e-36 165.0
55 TraesCS3A01G204500 chr7D 84.667 150 13 3 713 852 181839010 181839159 2.610000e-29 141.0
56 TraesCS3A01G204500 chr6A 91.981 636 49 2 3 637 586017832 586017198 0.000000e+00 891.0
57 TraesCS3A01G204500 chr1D 91.981 636 49 2 3 637 272538949 272538315 0.000000e+00 891.0
58 TraesCS3A01G204500 chr1D 85.549 173 20 3 722 892 457182790 457182959 7.160000e-40 176.0
59 TraesCS3A01G204500 chr2A 91.757 643 46 7 3 641 769225126 769224487 0.000000e+00 887.0
60 TraesCS3A01G204500 chr1B 99.225 129 1 0 6247 6375 175682597 175682469 4.190000e-57 233.0
61 TraesCS3A01G204500 chr7A 99.219 128 1 0 6248 6375 675331822 675331695 1.510000e-56 231.0
62 TraesCS3A01G204500 chr7A 93.750 128 8 0 6248 6375 504961189 504961062 7.110000e-45 193.0
63 TraesCS3A01G204500 chr7A 85.000 180 18 3 722 892 15602469 15602290 2.580000e-39 174.0
64 TraesCS3A01G204500 chr7B 99.213 127 1 0 6248 6374 528024208 528024334 5.420000e-56 230.0
65 TraesCS3A01G204500 chr7B 94.615 130 7 0 6248 6377 332242888 332242759 1.180000e-47 202.0
66 TraesCS3A01G204500 chr7B 92.199 141 10 1 6238 6377 489146911 489146771 1.530000e-46 198.0
67 TraesCS3A01G204500 chr7B 84.444 180 17 5 722 892 59685652 59685829 4.310000e-37 167.0
68 TraesCS3A01G204500 chr5A 97.727 132 2 1 6244 6374 677157920 677158051 7.010000e-55 226.0
69 TraesCS3A01G204500 chr5A 96.825 63 2 0 1161 1223 444851329 444851267 9.530000e-19 106.0
70 TraesCS3A01G204500 chr4B 96.154 130 5 0 6245 6374 55925902 55926031 5.460000e-51 213.0
71 TraesCS3A01G204500 chr6B 94.697 132 7 0 6244 6375 159156794 159156925 9.130000e-49 206.0
72 TraesCS3A01G204500 chr4A 80.233 172 25 8 722 892 659124471 659124308 3.400000e-23 121.0
73 TraesCS3A01G204500 chr5B 96.825 63 2 0 1161 1223 404145207 404145145 9.530000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G204500 chr3A 359076602 359083547 6945 True 12827.000000 12827 100.000000 1 6946 1 chr3A.!!$R1 6945
1 TraesCS3A01G204500 chr3A 742765671 742770078 4407 True 716.750000 1312 87.366750 1147 6251 4 chr3A.!!$R3 5104
2 TraesCS3A01G204500 chr3A 742611645 742616982 5337 True 536.933333 1338 89.361167 1162 6442 6 chr3A.!!$R2 5280
3 TraesCS3A01G204500 chr3D 274336978 274342970 5992 False 1835.400000 6353 92.872800 925 6946 5 chr3D.!!$F1 6021
4 TraesCS3A01G204500 chr3D 609212140 609215927 3787 True 756.250000 1210 84.556000 1853 6698 4 chr3D.!!$R2 4845
5 TraesCS3A01G204500 chr3D 609555238 609556950 1712 False 625.500000 1088 83.060000 3788 5100 2 chr3D.!!$F2 1312
6 TraesCS3A01G204500 chr3D 609166326 609171623 5297 True 622.200000 1330 88.673400 1147 6246 5 chr3D.!!$R1 5099
7 TraesCS3A01G204500 chr3B 359222571 359228687 6116 True 1804.400000 5081 93.752000 925 6946 5 chr3B.!!$R1 6021
8 TraesCS3A01G204500 chr3B 819896406 819901639 5233 True 613.000000 1282 88.577200 1147 6250 5 chr3B.!!$R2 5103
9 TraesCS3A01G204500 chr3B 819929657 819933094 3437 True 487.283333 983 87.481333 1853 6443 6 chr3B.!!$R3 4590
10 TraesCS3A01G204500 chr6D 303614027 303614665 638 True 909.000000 909 92.356000 3 641 1 chr6D.!!$R2 638
11 TraesCS3A01G204500 chr6D 131933396 131934031 635 True 902.000000 902 92.308000 3 637 1 chr6D.!!$R1 634
12 TraesCS3A01G204500 chr2D 314366772 314367406 634 False 907.000000 907 92.465000 3 637 1 chr2D.!!$F1 634
13 TraesCS3A01G204500 chr5D 482814422 482815063 641 False 902.000000 902 92.068000 3 643 1 chr5D.!!$F2 640
14 TraesCS3A01G204500 chr4D 486776480 486777114 634 True 902.000000 902 92.296000 3 637 1 chr4D.!!$R2 634
15 TraesCS3A01G204500 chr7D 188544296 188544939 643 True 894.000000 894 91.783000 3 645 1 chr7D.!!$R1 642
16 TraesCS3A01G204500 chr6A 586017198 586017832 634 True 891.000000 891 91.981000 3 637 1 chr6A.!!$R1 634
17 TraesCS3A01G204500 chr1D 272538315 272538949 634 True 891.000000 891 91.981000 3 637 1 chr1D.!!$R1 634
18 TraesCS3A01G204500 chr2A 769224487 769225126 639 True 887.000000 887 91.757000 3 641 1 chr2A.!!$R1 638

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
892 897 0.179001 CCCTCGAACCAAACAACCCT 60.179 55.000 0.00 0.0 0.00 4.34 F
1379 3563 0.168128 CTGCGTGTTCCGGATTTTCC 59.832 55.000 4.15 0.0 35.87 3.13 F
1751 4143 0.472044 TTAACTGCACTGGTCAGCCA 59.528 50.000 0.00 0.0 43.73 4.75 F
1752 4144 0.472044 TAACTGCACTGGTCAGCCAA 59.528 50.000 0.00 0.0 45.51 4.52 F
2523 4998 1.076632 TGGTGGGAACGGCAAAGTT 60.077 52.632 0.00 0.0 36.99 2.66 F
3394 6152 5.648178 TTAAGTAAGACGCTGGTGATACA 57.352 39.130 0.00 0.0 0.00 2.29 F
5125 8567 0.178992 TTCTTTGGCACTCCACCCAG 60.179 55.000 0.00 0.0 43.33 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2372 4839 0.111061 TGTGGATAGGGATGCATGGC 59.889 55.000 2.46 0.00 35.65 4.40 R
2523 4998 0.327924 CATTAGGGCCACTGTCCACA 59.672 55.000 6.18 0.00 39.40 4.17 R
3179 5687 0.544697 GAGAGGGAGAGACGAGGAGT 59.455 60.000 0.00 0.00 0.00 3.85 R
3181 5689 0.834612 GAGAGAGGGAGAGACGAGGA 59.165 60.000 0.00 0.00 0.00 3.71 R
3562 6320 1.950828 GGCAGACCTGACATCAGATG 58.049 55.000 10.55 9.03 46.59 2.90 R
5268 8710 1.202879 CCAAGCCAACCACTCCACTTA 60.203 52.381 0.00 0.00 0.00 2.24 R
6351 9913 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 6.436532 ACAAGGAGAGAATTCAAGATGCAAAT 59.563 34.615 8.44 0.00 0.00 2.32
59 60 6.966534 AATCAGATTTCAATGGGGATACAC 57.033 37.500 0.00 0.00 44.44 2.90
76 77 2.268298 ACACGCTCTTACGGCTAATTG 58.732 47.619 0.00 0.00 37.37 2.32
112 113 4.156739 CAGTCCAAGGGCTTCTATGAAAAC 59.843 45.833 0.00 0.00 0.00 2.43
135 136 2.662070 GGTTGGATTCGTCCCCCGA 61.662 63.158 0.00 0.00 45.66 5.14
138 139 0.978667 TTGGATTCGTCCCCCGATGA 60.979 55.000 0.00 0.00 46.75 2.92
148 149 1.422024 TCCCCCGATGAGTTTTGTGAA 59.578 47.619 0.00 0.00 0.00 3.18
180 182 7.608153 TGTTGATGCTTCTTTTGATCATGATT 58.392 30.769 10.14 0.00 0.00 2.57
222 224 2.940410 GTTGTCCTGAGGAACGACAAAA 59.060 45.455 0.96 0.00 45.35 2.44
240 243 6.432403 ACAAAAGGAATTTTATTGCAGGGA 57.568 33.333 0.00 0.00 0.00 4.20
376 380 7.833682 TCTGATAATTTGGAGGTTATTGAAGCA 59.166 33.333 0.00 0.00 35.41 3.91
401 405 2.173758 TAATGGCGGACGGTCAGCAA 62.174 55.000 29.25 21.92 39.36 3.91
425 429 0.179124 GGCGGCGGCAATTTTTGATA 60.179 50.000 29.41 0.00 42.47 2.15
430 434 3.616379 CGGCGGCAATTTTTGATAATTGT 59.384 39.130 10.53 0.00 43.91 2.71
459 463 7.747155 TTTTTGACGTATGATTTTCCTACCA 57.253 32.000 0.00 0.00 0.00 3.25
486 490 9.238368 CTAGGTTTGAACATTGTAATAGGGAAA 57.762 33.333 0.00 0.00 0.00 3.13
591 596 7.888021 AGATTGTACCATTCCTCACAAACAATA 59.112 33.333 0.00 0.00 36.68 1.90
629 634 9.474920 TTGATTGAATAAAGTCCACATGTTTTC 57.525 29.630 0.00 0.00 0.00 2.29
653 658 4.568072 AAAAAGAAAACCAAACAGCCCT 57.432 36.364 0.00 0.00 0.00 5.19
654 659 5.685520 AAAAAGAAAACCAAACAGCCCTA 57.314 34.783 0.00 0.00 0.00 3.53
655 660 4.937201 AAAGAAAACCAAACAGCCCTAG 57.063 40.909 0.00 0.00 0.00 3.02
656 661 3.876309 AGAAAACCAAACAGCCCTAGA 57.124 42.857 0.00 0.00 0.00 2.43
657 662 3.756117 AGAAAACCAAACAGCCCTAGAG 58.244 45.455 0.00 0.00 0.00 2.43
658 663 3.138468 AGAAAACCAAACAGCCCTAGAGT 59.862 43.478 0.00 0.00 0.00 3.24
659 664 2.568623 AACCAAACAGCCCTAGAGTG 57.431 50.000 0.00 0.00 0.00 3.51
660 665 1.729586 ACCAAACAGCCCTAGAGTGA 58.270 50.000 0.00 0.00 0.00 3.41
661 666 2.054799 ACCAAACAGCCCTAGAGTGAA 58.945 47.619 0.00 0.00 0.00 3.18
662 667 2.644798 ACCAAACAGCCCTAGAGTGAAT 59.355 45.455 0.00 0.00 0.00 2.57
663 668 3.012518 CCAAACAGCCCTAGAGTGAATG 58.987 50.000 0.00 0.00 0.00 2.67
664 669 3.560025 CCAAACAGCCCTAGAGTGAATGT 60.560 47.826 0.00 0.00 0.00 2.71
665 670 4.323485 CCAAACAGCCCTAGAGTGAATGTA 60.323 45.833 0.00 0.00 0.00 2.29
666 671 5.431765 CAAACAGCCCTAGAGTGAATGTAT 58.568 41.667 0.00 0.00 0.00 2.29
667 672 4.679373 ACAGCCCTAGAGTGAATGTATG 57.321 45.455 0.00 0.00 0.00 2.39
668 673 4.033709 ACAGCCCTAGAGTGAATGTATGT 58.966 43.478 0.00 0.00 0.00 2.29
669 674 4.141846 ACAGCCCTAGAGTGAATGTATGTG 60.142 45.833 0.00 0.00 0.00 3.21
670 675 3.134458 GCCCTAGAGTGAATGTATGTGC 58.866 50.000 0.00 0.00 0.00 4.57
671 676 3.384668 CCCTAGAGTGAATGTATGTGCG 58.615 50.000 0.00 0.00 0.00 5.34
672 677 3.181475 CCCTAGAGTGAATGTATGTGCGT 60.181 47.826 0.00 0.00 0.00 5.24
673 678 3.798878 CCTAGAGTGAATGTATGTGCGTG 59.201 47.826 0.00 0.00 0.00 5.34
674 679 3.319137 AGAGTGAATGTATGTGCGTGT 57.681 42.857 0.00 0.00 0.00 4.49
675 680 3.664107 AGAGTGAATGTATGTGCGTGTT 58.336 40.909 0.00 0.00 0.00 3.32
676 681 4.816392 AGAGTGAATGTATGTGCGTGTTA 58.184 39.130 0.00 0.00 0.00 2.41
677 682 4.864806 AGAGTGAATGTATGTGCGTGTTAG 59.135 41.667 0.00 0.00 0.00 2.34
678 683 4.816392 AGTGAATGTATGTGCGTGTTAGA 58.184 39.130 0.00 0.00 0.00 2.10
679 684 5.234752 AGTGAATGTATGTGCGTGTTAGAA 58.765 37.500 0.00 0.00 0.00 2.10
680 685 5.699001 AGTGAATGTATGTGCGTGTTAGAAA 59.301 36.000 0.00 0.00 0.00 2.52
681 686 5.788531 GTGAATGTATGTGCGTGTTAGAAAC 59.211 40.000 0.00 0.00 0.00 2.78
682 687 4.577687 ATGTATGTGCGTGTTAGAAACG 57.422 40.909 0.00 0.00 43.81 3.60
683 688 2.732500 TGTATGTGCGTGTTAGAAACGG 59.267 45.455 0.00 0.00 41.31 4.44
684 689 2.157834 ATGTGCGTGTTAGAAACGGA 57.842 45.000 0.00 0.00 41.31 4.69
685 690 1.937278 TGTGCGTGTTAGAAACGGAA 58.063 45.000 0.00 0.00 43.08 4.30
686 691 2.277969 TGTGCGTGTTAGAAACGGAAA 58.722 42.857 0.00 0.00 43.08 3.13
687 692 2.676839 TGTGCGTGTTAGAAACGGAAAA 59.323 40.909 0.00 0.00 43.08 2.29
688 693 3.031126 GTGCGTGTTAGAAACGGAAAAC 58.969 45.455 0.00 0.00 43.08 2.43
689 694 2.937799 TGCGTGTTAGAAACGGAAAACT 59.062 40.909 0.00 0.00 38.47 2.66
690 695 3.001533 TGCGTGTTAGAAACGGAAAACTC 59.998 43.478 0.00 0.00 38.47 3.01
691 696 3.605461 GCGTGTTAGAAACGGAAAACTCC 60.605 47.826 0.00 0.00 41.31 3.85
692 697 3.556775 CGTGTTAGAAACGGAAAACTCCA 59.443 43.478 0.00 0.00 37.39 3.86
693 698 4.551410 CGTGTTAGAAACGGAAAACTCCAC 60.551 45.833 0.00 0.00 37.39 4.02
694 699 4.573607 GTGTTAGAAACGGAAAACTCCACT 59.426 41.667 0.00 0.00 0.00 4.00
695 700 5.065602 GTGTTAGAAACGGAAAACTCCACTT 59.934 40.000 0.00 0.00 0.00 3.16
696 701 6.258507 GTGTTAGAAACGGAAAACTCCACTTA 59.741 38.462 0.00 0.00 0.00 2.24
697 702 6.258507 TGTTAGAAACGGAAAACTCCACTTAC 59.741 38.462 0.00 0.00 0.00 2.34
698 703 5.032327 AGAAACGGAAAACTCCACTTACT 57.968 39.130 0.00 0.00 0.00 2.24
699 704 5.434408 AGAAACGGAAAACTCCACTTACTT 58.566 37.500 0.00 0.00 0.00 2.24
700 705 6.585416 AGAAACGGAAAACTCCACTTACTTA 58.415 36.000 0.00 0.00 0.00 2.24
701 706 6.481313 AGAAACGGAAAACTCCACTTACTTAC 59.519 38.462 0.00 0.00 0.00 2.34
702 707 4.301628 ACGGAAAACTCCACTTACTTACG 58.698 43.478 0.00 0.00 0.00 3.18
703 708 4.037923 ACGGAAAACTCCACTTACTTACGA 59.962 41.667 0.00 0.00 0.00 3.43
704 709 5.166398 CGGAAAACTCCACTTACTTACGAT 58.834 41.667 0.00 0.00 0.00 3.73
705 710 5.287992 CGGAAAACTCCACTTACTTACGATC 59.712 44.000 0.00 0.00 0.00 3.69
706 711 6.161381 GGAAAACTCCACTTACTTACGATCA 58.839 40.000 0.00 0.00 0.00 2.92
707 712 6.647895 GGAAAACTCCACTTACTTACGATCAA 59.352 38.462 0.00 0.00 0.00 2.57
708 713 7.148623 GGAAAACTCCACTTACTTACGATCAAG 60.149 40.741 0.00 0.00 0.00 3.02
709 714 5.979288 ACTCCACTTACTTACGATCAAGT 57.021 39.130 4.10 4.10 41.56 3.16
710 715 5.952033 ACTCCACTTACTTACGATCAAGTC 58.048 41.667 1.92 0.00 39.45 3.01
711 716 5.711036 ACTCCACTTACTTACGATCAAGTCT 59.289 40.000 1.92 0.00 39.45 3.24
712 717 6.127952 ACTCCACTTACTTACGATCAAGTCTC 60.128 42.308 1.92 0.00 39.45 3.36
713 718 5.708697 TCCACTTACTTACGATCAAGTCTCA 59.291 40.000 1.92 0.00 39.45 3.27
714 719 6.377429 TCCACTTACTTACGATCAAGTCTCAT 59.623 38.462 1.92 0.00 39.45 2.90
715 720 7.036220 CCACTTACTTACGATCAAGTCTCATT 58.964 38.462 1.92 0.00 39.45 2.57
716 721 7.545965 CCACTTACTTACGATCAAGTCTCATTT 59.454 37.037 1.92 0.00 39.45 2.32
717 722 8.587950 CACTTACTTACGATCAAGTCTCATTTC 58.412 37.037 1.92 0.00 39.45 2.17
718 723 8.304596 ACTTACTTACGATCAAGTCTCATTTCA 58.695 33.333 1.92 0.00 39.45 2.69
719 724 9.140286 CTTACTTACGATCAAGTCTCATTTCAA 57.860 33.333 1.92 0.00 39.45 2.69
720 725 7.962964 ACTTACGATCAAGTCTCATTTCAAA 57.037 32.000 0.00 0.00 33.41 2.69
721 726 8.553459 ACTTACGATCAAGTCTCATTTCAAAT 57.447 30.769 0.00 0.00 33.41 2.32
722 727 8.446273 ACTTACGATCAAGTCTCATTTCAAATG 58.554 33.333 3.46 3.46 33.41 2.32
723 728 6.187125 ACGATCAAGTCTCATTTCAAATGG 57.813 37.500 10.30 1.69 0.00 3.16
724 729 5.707298 ACGATCAAGTCTCATTTCAAATGGT 59.293 36.000 10.30 0.00 0.00 3.55
725 730 6.025896 CGATCAAGTCTCATTTCAAATGGTG 58.974 40.000 10.30 4.30 0.00 4.17
726 731 6.348786 CGATCAAGTCTCATTTCAAATGGTGT 60.349 38.462 10.30 0.00 0.00 4.16
727 732 6.713762 TCAAGTCTCATTTCAAATGGTGTT 57.286 33.333 10.30 0.00 0.00 3.32
728 733 7.111247 TCAAGTCTCATTTCAAATGGTGTTT 57.889 32.000 10.30 0.00 0.00 2.83
729 734 6.979817 TCAAGTCTCATTTCAAATGGTGTTTG 59.020 34.615 10.30 10.06 0.00 2.93
730 735 5.846203 AGTCTCATTTCAAATGGTGTTTGG 58.154 37.500 10.30 0.00 0.00 3.28
731 736 5.363580 AGTCTCATTTCAAATGGTGTTTGGT 59.636 36.000 10.30 0.00 0.00 3.67
732 737 6.048509 GTCTCATTTCAAATGGTGTTTGGTT 58.951 36.000 10.30 0.00 0.00 3.67
733 738 6.200854 GTCTCATTTCAAATGGTGTTTGGTTC 59.799 38.462 10.30 0.00 0.00 3.62
734 739 6.098124 TCTCATTTCAAATGGTGTTTGGTTCT 59.902 34.615 10.30 0.00 0.00 3.01
735 740 6.279882 TCATTTCAAATGGTGTTTGGTTCTC 58.720 36.000 10.30 0.00 0.00 2.87
736 741 5.930837 TTTCAAATGGTGTTTGGTTCTCT 57.069 34.783 1.21 0.00 0.00 3.10
737 742 7.286546 TCATTTCAAATGGTGTTTGGTTCTCTA 59.713 33.333 10.30 0.00 0.00 2.43
738 743 6.633500 TTCAAATGGTGTTTGGTTCTCTAG 57.367 37.500 1.21 0.00 0.00 2.43
739 744 5.690865 TCAAATGGTGTTTGGTTCTCTAGT 58.309 37.500 1.21 0.00 0.00 2.57
740 745 5.763204 TCAAATGGTGTTTGGTTCTCTAGTC 59.237 40.000 1.21 0.00 0.00 2.59
741 746 5.568620 AATGGTGTTTGGTTCTCTAGTCT 57.431 39.130 0.00 0.00 0.00 3.24
742 747 5.568620 ATGGTGTTTGGTTCTCTAGTCTT 57.431 39.130 0.00 0.00 0.00 3.01
743 748 6.681729 ATGGTGTTTGGTTCTCTAGTCTTA 57.318 37.500 0.00 0.00 0.00 2.10
744 749 6.097915 TGGTGTTTGGTTCTCTAGTCTTAG 57.902 41.667 0.00 0.00 0.00 2.18
745 750 5.011738 TGGTGTTTGGTTCTCTAGTCTTAGG 59.988 44.000 0.00 0.00 0.00 2.69
746 751 5.245526 GGTGTTTGGTTCTCTAGTCTTAGGA 59.754 44.000 0.00 0.00 0.00 2.94
747 752 6.157904 GTGTTTGGTTCTCTAGTCTTAGGAC 58.842 44.000 0.00 0.00 42.41 3.85
764 769 3.808116 GGACTTTTTCCAGTTCGTAGC 57.192 47.619 0.00 0.00 45.10 3.58
765 770 3.135994 GGACTTTTTCCAGTTCGTAGCA 58.864 45.455 0.00 0.00 45.10 3.49
766 771 3.059120 GGACTTTTTCCAGTTCGTAGCAC 60.059 47.826 0.00 0.00 45.10 4.40
767 772 3.805207 ACTTTTTCCAGTTCGTAGCACT 58.195 40.909 0.00 0.00 0.00 4.40
768 773 4.196971 ACTTTTTCCAGTTCGTAGCACTT 58.803 39.130 0.00 0.00 0.00 3.16
769 774 4.638865 ACTTTTTCCAGTTCGTAGCACTTT 59.361 37.500 0.00 0.00 0.00 2.66
770 775 5.124936 ACTTTTTCCAGTTCGTAGCACTTTT 59.875 36.000 0.00 0.00 0.00 2.27
771 776 5.570234 TTTTCCAGTTCGTAGCACTTTTT 57.430 34.783 0.00 0.00 0.00 1.94
772 777 4.545823 TTCCAGTTCGTAGCACTTTTTG 57.454 40.909 0.00 0.00 0.00 2.44
773 778 3.799366 TCCAGTTCGTAGCACTTTTTGA 58.201 40.909 0.00 0.00 0.00 2.69
774 779 4.193090 TCCAGTTCGTAGCACTTTTTGAA 58.807 39.130 0.00 0.00 0.00 2.69
775 780 4.636648 TCCAGTTCGTAGCACTTTTTGAAA 59.363 37.500 0.00 0.00 0.00 2.69
776 781 5.124138 TCCAGTTCGTAGCACTTTTTGAAAA 59.876 36.000 0.00 0.00 0.00 2.29
777 782 5.802956 CCAGTTCGTAGCACTTTTTGAAAAA 59.197 36.000 2.83 2.83 0.00 1.94
778 783 6.020678 CCAGTTCGTAGCACTTTTTGAAAAAG 60.021 38.462 24.36 24.36 0.00 2.27
779 784 6.745450 CAGTTCGTAGCACTTTTTGAAAAAGA 59.255 34.615 30.55 10.66 0.00 2.52
780 785 6.745907 AGTTCGTAGCACTTTTTGAAAAAGAC 59.254 34.615 30.55 22.25 0.00 3.01
781 786 6.431198 TCGTAGCACTTTTTGAAAAAGACT 57.569 33.333 30.55 26.38 0.00 3.24
782 787 6.483687 TCGTAGCACTTTTTGAAAAAGACTC 58.516 36.000 30.55 19.47 0.00 3.36
783 788 6.315393 TCGTAGCACTTTTTGAAAAAGACTCT 59.685 34.615 30.55 23.69 0.00 3.24
784 789 6.967199 CGTAGCACTTTTTGAAAAAGACTCTT 59.033 34.615 30.55 15.87 0.00 2.85
785 790 8.120465 CGTAGCACTTTTTGAAAAAGACTCTTA 58.880 33.333 30.55 15.10 0.00 2.10
786 791 9.783256 GTAGCACTTTTTGAAAAAGACTCTTAA 57.217 29.630 30.55 13.10 0.00 1.85
787 792 8.917415 AGCACTTTTTGAAAAAGACTCTTAAG 57.083 30.769 30.55 7.82 0.00 1.85
788 793 8.739972 AGCACTTTTTGAAAAAGACTCTTAAGA 58.260 29.630 30.55 4.81 0.00 2.10
789 794 9.353999 GCACTTTTTGAAAAAGACTCTTAAGAA 57.646 29.630 30.55 0.00 0.00 2.52
793 798 9.855021 TTTTTGAAAAAGACTCTTAAGAAGGTG 57.145 29.630 6.63 0.00 0.00 4.00
794 799 6.619801 TGAAAAAGACTCTTAAGAAGGTGC 57.380 37.500 6.63 0.00 0.00 5.01
795 800 6.357367 TGAAAAAGACTCTTAAGAAGGTGCT 58.643 36.000 6.63 0.10 0.00 4.40
796 801 6.828785 TGAAAAAGACTCTTAAGAAGGTGCTT 59.171 34.615 6.63 5.51 0.00 3.91
797 802 6.869315 AAAAGACTCTTAAGAAGGTGCTTC 57.131 37.500 6.63 0.00 40.45 3.86
811 816 6.561737 AAGGTGCTTCTAAAGACTTTTAGC 57.438 37.500 5.61 12.66 43.52 3.09
812 817 5.621193 AGGTGCTTCTAAAGACTTTTAGCA 58.379 37.500 19.63 19.63 43.52 3.49
813 818 6.062095 AGGTGCTTCTAAAGACTTTTAGCAA 58.938 36.000 22.72 11.82 43.52 3.91
814 819 6.017026 AGGTGCTTCTAAAGACTTTTAGCAAC 60.017 38.462 24.96 24.96 43.52 4.17
815 820 6.238648 GGTGCTTCTAAAGACTTTTAGCAACA 60.239 38.462 26.17 11.28 43.52 3.33
816 821 7.193595 GTGCTTCTAAAGACTTTTAGCAACAA 58.806 34.615 22.72 7.71 43.52 2.83
817 822 7.700656 GTGCTTCTAAAGACTTTTAGCAACAAA 59.299 33.333 22.72 7.46 43.52 2.83
818 823 8.247562 TGCTTCTAAAGACTTTTAGCAACAAAA 58.752 29.630 20.55 5.70 43.52 2.44
819 824 9.083080 GCTTCTAAAGACTTTTAGCAACAAAAA 57.917 29.630 17.52 0.00 43.52 1.94
828 833 7.629027 CTTTTAGCAACAAAAAGTCTCATCC 57.371 36.000 0.00 0.00 38.53 3.51
829 834 6.959639 TTTAGCAACAAAAAGTCTCATCCT 57.040 33.333 0.00 0.00 0.00 3.24
830 835 4.843220 AGCAACAAAAAGTCTCATCCTG 57.157 40.909 0.00 0.00 0.00 3.86
831 836 4.210331 AGCAACAAAAAGTCTCATCCTGT 58.790 39.130 0.00 0.00 0.00 4.00
832 837 4.646492 AGCAACAAAAAGTCTCATCCTGTT 59.354 37.500 0.00 0.00 0.00 3.16
833 838 5.127682 AGCAACAAAAAGTCTCATCCTGTTT 59.872 36.000 0.00 0.00 0.00 2.83
834 839 5.232838 GCAACAAAAAGTCTCATCCTGTTTG 59.767 40.000 0.00 0.00 41.11 2.93
835 840 5.520376 ACAAAAAGTCTCATCCTGTTTGG 57.480 39.130 7.70 0.00 40.12 3.28
836 841 4.956075 ACAAAAAGTCTCATCCTGTTTGGT 59.044 37.500 7.70 0.00 40.12 3.67
837 842 5.422012 ACAAAAAGTCTCATCCTGTTTGGTT 59.578 36.000 7.70 0.00 40.12 3.67
838 843 6.070824 ACAAAAAGTCTCATCCTGTTTGGTTT 60.071 34.615 7.70 0.00 40.12 3.27
839 844 5.520376 AAAGTCTCATCCTGTTTGGTTTG 57.480 39.130 0.00 0.00 37.07 2.93
840 845 4.170468 AGTCTCATCCTGTTTGGTTTGT 57.830 40.909 0.00 0.00 37.07 2.83
841 846 4.536765 AGTCTCATCCTGTTTGGTTTGTT 58.463 39.130 0.00 0.00 37.07 2.83
842 847 5.690865 AGTCTCATCCTGTTTGGTTTGTTA 58.309 37.500 0.00 0.00 37.07 2.41
843 848 5.765182 AGTCTCATCCTGTTTGGTTTGTTAG 59.235 40.000 0.00 0.00 37.07 2.34
844 849 5.048713 GTCTCATCCTGTTTGGTTTGTTAGG 60.049 44.000 0.00 0.00 37.07 2.69
845 850 4.148838 TCATCCTGTTTGGTTTGTTAGGG 58.851 43.478 0.00 0.00 37.07 3.53
846 851 3.955524 TCCTGTTTGGTTTGTTAGGGA 57.044 42.857 0.00 0.00 37.07 4.20
847 852 4.463050 TCCTGTTTGGTTTGTTAGGGAT 57.537 40.909 0.00 0.00 37.07 3.85
848 853 4.810345 TCCTGTTTGGTTTGTTAGGGATT 58.190 39.130 0.00 0.00 37.07 3.01
849 854 5.212745 TCCTGTTTGGTTTGTTAGGGATTT 58.787 37.500 0.00 0.00 37.07 2.17
850 855 5.663556 TCCTGTTTGGTTTGTTAGGGATTTT 59.336 36.000 0.00 0.00 37.07 1.82
851 856 6.157123 TCCTGTTTGGTTTGTTAGGGATTTTT 59.843 34.615 0.00 0.00 37.07 1.94
889 894 4.316205 AAAATCCCTCGAACCAAACAAC 57.684 40.909 0.00 0.00 0.00 3.32
890 895 1.905637 ATCCCTCGAACCAAACAACC 58.094 50.000 0.00 0.00 0.00 3.77
891 896 0.179012 TCCCTCGAACCAAACAACCC 60.179 55.000 0.00 0.00 0.00 4.11
892 897 0.179001 CCCTCGAACCAAACAACCCT 60.179 55.000 0.00 0.00 0.00 4.34
893 898 0.951558 CCTCGAACCAAACAACCCTG 59.048 55.000 0.00 0.00 0.00 4.45
894 899 1.476110 CCTCGAACCAAACAACCCTGA 60.476 52.381 0.00 0.00 0.00 3.86
895 900 2.294074 CTCGAACCAAACAACCCTGAA 58.706 47.619 0.00 0.00 0.00 3.02
896 901 2.884639 CTCGAACCAAACAACCCTGAAT 59.115 45.455 0.00 0.00 0.00 2.57
897 902 4.069304 CTCGAACCAAACAACCCTGAATA 58.931 43.478 0.00 0.00 0.00 1.75
898 903 4.069304 TCGAACCAAACAACCCTGAATAG 58.931 43.478 0.00 0.00 0.00 1.73
899 904 3.365969 CGAACCAAACAACCCTGAATAGC 60.366 47.826 0.00 0.00 0.00 2.97
900 905 2.159382 ACCAAACAACCCTGAATAGCG 58.841 47.619 0.00 0.00 0.00 4.26
901 906 1.135402 CCAAACAACCCTGAATAGCGC 60.135 52.381 0.00 0.00 0.00 5.92
902 907 1.812571 CAAACAACCCTGAATAGCGCT 59.187 47.619 17.26 17.26 0.00 5.92
903 908 1.453155 AACAACCCTGAATAGCGCTG 58.547 50.000 22.90 3.15 0.00 5.18
904 909 0.392998 ACAACCCTGAATAGCGCTGG 60.393 55.000 22.90 14.36 0.00 4.85
905 910 1.452108 AACCCTGAATAGCGCTGGC 60.452 57.895 22.90 9.69 40.37 4.85
906 911 2.969238 CCCTGAATAGCGCTGGCG 60.969 66.667 22.90 10.80 46.35 5.69
918 923 2.036556 CGCTGGCGCATAATAAAAGG 57.963 50.000 10.83 0.00 35.30 3.11
919 924 1.601903 CGCTGGCGCATAATAAAAGGA 59.398 47.619 10.83 0.00 35.30 3.36
920 925 2.349817 CGCTGGCGCATAATAAAAGGAG 60.350 50.000 10.83 0.00 35.30 3.69
921 926 2.878406 GCTGGCGCATAATAAAAGGAGA 59.122 45.455 10.83 0.00 35.78 3.71
922 927 3.304057 GCTGGCGCATAATAAAAGGAGAC 60.304 47.826 10.83 0.00 35.78 3.36
923 928 2.869801 TGGCGCATAATAAAAGGAGACG 59.130 45.455 10.83 0.00 0.00 4.18
973 979 1.990060 CCTCCCCCTCGCTTCTTCA 60.990 63.158 0.00 0.00 0.00 3.02
1017 1023 2.114670 CATGGCGATGGCGTCCTTT 61.115 57.895 0.00 0.00 42.58 3.11
1029 1035 2.204090 TCCTTTCGCCCCCTTCCT 60.204 61.111 0.00 0.00 0.00 3.36
1159 1165 2.060383 CAGGAGGACGATGGCTCCA 61.060 63.158 0.00 0.00 38.39 3.86
1379 3563 0.168128 CTGCGTGTTCCGGATTTTCC 59.832 55.000 4.15 0.00 35.87 3.13
1400 3584 2.825532 CCCTCCTATTTTGTGTGGTTGG 59.174 50.000 0.00 0.00 0.00 3.77
1445 3629 4.501559 CGCAATTGAACTATGATTGGCAAG 59.498 41.667 10.34 0.00 32.73 4.01
1695 3888 4.694339 ACGGTTCCTGATGCTAGTATTTC 58.306 43.478 0.00 0.00 0.00 2.17
1751 4143 0.472044 TTAACTGCACTGGTCAGCCA 59.528 50.000 0.00 0.00 43.73 4.75
1752 4144 0.472044 TAACTGCACTGGTCAGCCAA 59.528 50.000 0.00 0.00 45.51 4.52
1811 4203 7.234187 TCTATGAACACGATTTCAGTTATGC 57.766 36.000 8.90 0.00 38.87 3.14
1812 4204 4.678509 TGAACACGATTTCAGTTATGCC 57.321 40.909 0.00 0.00 31.68 4.40
1813 4205 4.068599 TGAACACGATTTCAGTTATGCCA 58.931 39.130 0.00 0.00 31.68 4.92
1814 4206 4.083537 TGAACACGATTTCAGTTATGCCAC 60.084 41.667 0.00 0.00 31.68 5.01
1815 4207 2.415168 ACACGATTTCAGTTATGCCACG 59.585 45.455 0.00 0.00 0.00 4.94
1816 4208 2.415168 CACGATTTCAGTTATGCCACGT 59.585 45.455 0.00 0.00 0.00 4.49
1817 4209 3.615056 CACGATTTCAGTTATGCCACGTA 59.385 43.478 0.00 0.00 0.00 3.57
1818 4210 3.615496 ACGATTTCAGTTATGCCACGTAC 59.385 43.478 0.00 0.00 0.00 3.67
1902 4314 1.611491 TGGACCGGAATTTTGCACTTC 59.389 47.619 9.46 0.00 0.00 3.01
2338 4801 7.611467 AGAATGCCAACTTTCTATGTGATAACA 59.389 33.333 0.00 0.00 38.23 2.41
2372 4839 9.754382 CTTAATGGAATGAACCAATTCTAATGG 57.246 33.333 0.00 0.00 43.47 3.16
2373 4840 5.596836 TGGAATGAACCAATTCTAATGGC 57.403 39.130 0.00 0.00 41.89 4.40
2513 4988 4.308458 CGCGGTGAGTGGTGGGAA 62.308 66.667 0.00 0.00 0.00 3.97
2523 4998 1.076632 TGGTGGGAACGGCAAAGTT 60.077 52.632 0.00 0.00 36.99 2.66
2645 5120 6.976934 TCCTGTCTTTTATTGCCTTCTTTT 57.023 33.333 0.00 0.00 0.00 2.27
2694 5170 8.959058 CAGTCAGAACAGATATTTCGTATACAC 58.041 37.037 3.32 0.00 0.00 2.90
2709 5185 9.825109 TTTCGTATACACATATTCAAATCCAGA 57.175 29.630 3.32 0.00 0.00 3.86
2710 5186 9.996554 TTCGTATACACATATTCAAATCCAGAT 57.003 29.630 3.32 0.00 0.00 2.90
2715 5191 9.743581 ATACACATATTCAAATCCAGATATGCA 57.256 29.630 0.00 0.00 0.00 3.96
2716 5192 7.879070 ACACATATTCAAATCCAGATATGCAC 58.121 34.615 0.00 0.00 0.00 4.57
2717 5193 7.503230 ACACATATTCAAATCCAGATATGCACA 59.497 33.333 0.00 0.00 0.00 4.57
2718 5194 8.354426 CACATATTCAAATCCAGATATGCACAA 58.646 33.333 0.00 0.00 0.00 3.33
2719 5195 9.085645 ACATATTCAAATCCAGATATGCACAAT 57.914 29.630 0.00 0.00 0.00 2.71
2720 5196 9.923143 CATATTCAAATCCAGATATGCACAATT 57.077 29.630 0.00 0.00 0.00 2.32
3174 5682 6.650120 TGGATGGAAGACAGGTACTTTATTC 58.350 40.000 0.00 0.00 34.60 1.75
3175 5683 6.056236 GGATGGAAGACAGGTACTTTATTCC 58.944 44.000 2.72 2.72 34.60 3.01
3176 5684 6.126739 GGATGGAAGACAGGTACTTTATTCCT 60.127 42.308 9.41 0.00 34.60 3.36
3177 5685 6.697641 TGGAAGACAGGTACTTTATTCCTT 57.302 37.500 9.41 0.00 34.60 3.36
3178 5686 6.472887 TGGAAGACAGGTACTTTATTCCTTG 58.527 40.000 9.41 0.00 34.60 3.61
3179 5687 6.271391 TGGAAGACAGGTACTTTATTCCTTGA 59.729 38.462 9.41 0.00 34.60 3.02
3180 5688 6.594547 GGAAGACAGGTACTTTATTCCTTGAC 59.405 42.308 2.50 0.00 34.60 3.18
3181 5689 6.936968 AGACAGGTACTTTATTCCTTGACT 57.063 37.500 0.00 0.00 34.60 3.41
3394 6152 5.648178 TTAAGTAAGACGCTGGTGATACA 57.352 39.130 0.00 0.00 0.00 2.29
3468 6226 7.433131 GGTGCACATGAATGACAAATACTTATG 59.567 37.037 20.43 0.00 0.00 1.90
3469 6227 6.974048 TGCACATGAATGACAAATACTTATGC 59.026 34.615 0.00 0.00 0.00 3.14
3470 6228 7.148035 TGCACATGAATGACAAATACTTATGCT 60.148 33.333 0.00 0.00 0.00 3.79
3562 6320 6.290294 TGGTCCCTTAACTACACAGAATAC 57.710 41.667 0.00 0.00 0.00 1.89
3595 6353 3.535629 CTGCCTGCCCGACTCACAA 62.536 63.158 0.00 0.00 0.00 3.33
3620 6378 5.824624 TCAACTCTTTGAGCTTGATCAAACT 59.175 36.000 11.12 11.12 42.68 2.66
3804 6562 4.997395 ACTGCATCCTGTAGTAACAAACAG 59.003 41.667 0.00 0.00 41.50 3.16
3949 6713 4.141321 TCACCTGTATGTACTCCTATCGGT 60.141 45.833 0.00 0.00 0.00 4.69
4069 7222 6.569179 TGGTTCTTAGCCATTTTAGTTGTC 57.431 37.500 0.00 0.00 0.00 3.18
4215 7401 5.063564 GGAGCAGTTCTTTCCTAACATAACG 59.936 44.000 0.00 0.00 0.00 3.18
4523 7720 2.533916 TCATTGCCATGCTTTACCCAA 58.466 42.857 0.00 0.00 0.00 4.12
4690 7903 7.654923 GTCATAGATCTCATATTGACAACAGCA 59.345 37.037 0.00 0.00 0.00 4.41
4919 8352 4.464069 TTGTTTGGAACTGGGACAAAAG 57.536 40.909 0.00 0.00 38.70 2.27
4920 8353 3.702792 TGTTTGGAACTGGGACAAAAGA 58.297 40.909 0.00 0.00 38.70 2.52
4921 8354 4.090090 TGTTTGGAACTGGGACAAAAGAA 58.910 39.130 0.00 0.00 38.70 2.52
4922 8355 4.528596 TGTTTGGAACTGGGACAAAAGAAA 59.471 37.500 0.00 0.00 38.70 2.52
5125 8567 0.178992 TTCTTTGGCACTCCACCCAG 60.179 55.000 0.00 0.00 43.33 4.45
5129 8571 1.768684 TTGGCACTCCACCCAGACTC 61.769 60.000 0.00 0.00 43.33 3.36
5186 8628 1.999648 TTTTGCCAGAGGAATGCAGT 58.000 45.000 0.00 0.00 36.21 4.40
5202 8644 6.405508 GGAATGCAGTGTCATTTCTCATCAAT 60.406 38.462 12.16 0.00 36.85 2.57
5268 8710 6.667414 TGGGTTGAGGACAATTATAGCAAAAT 59.333 34.615 0.00 0.00 38.32 1.82
5283 8725 3.573967 AGCAAAATAAGTGGAGTGGTTGG 59.426 43.478 0.00 0.00 0.00 3.77
5365 8808 9.467796 AATTTCCAAATTTCTAAAACCAACCAA 57.532 25.926 0.00 0.00 35.16 3.67
5407 8850 4.026356 AGGGAGGAGTGAATGTGAAAAG 57.974 45.455 0.00 0.00 0.00 2.27
5434 8877 1.456331 GCATGCCCCTGCCTATGTT 60.456 57.895 6.36 0.00 36.10 2.71
5445 8888 4.464008 CCTGCCTATGTTGTGGTTCATAT 58.536 43.478 0.00 0.00 0.00 1.78
5446 8889 5.456042 CCCTGCCTATGTTGTGGTTCATATA 60.456 44.000 0.00 0.00 0.00 0.86
5447 8890 6.240894 CCTGCCTATGTTGTGGTTCATATAT 58.759 40.000 0.00 0.00 0.00 0.86
5448 8891 7.394016 CCTGCCTATGTTGTGGTTCATATATA 58.606 38.462 0.00 0.00 0.00 0.86
5449 8892 7.334421 CCTGCCTATGTTGTGGTTCATATATAC 59.666 40.741 0.00 0.00 0.00 1.47
5490 8934 7.016153 TGTTACTTTGTACCTGGATGATCTT 57.984 36.000 0.00 0.00 0.00 2.40
5531 8975 4.910195 TGAGCAATGGTCAGTTGAACTAT 58.090 39.130 11.44 0.00 35.04 2.12
5537 8981 6.294176 GCAATGGTCAGTTGAACTATTTGAGT 60.294 38.462 0.00 0.00 41.56 3.41
5540 8984 9.520515 AATGGTCAGTTGAACTATTTGAGTATT 57.479 29.630 0.00 0.00 37.44 1.89
5586 9030 9.871238 CTTTGGATGCTCTAAGTAACTAGTTTA 57.129 33.333 14.49 0.00 0.00 2.01
5768 9261 0.889186 TTCCCTTTCTTCAGGTGCGC 60.889 55.000 0.00 0.00 30.96 6.09
5792 9285 4.341806 ACTTTTGAATCACAATGTGGCTCA 59.658 37.500 13.95 12.91 38.36 4.26
5866 9359 0.169009 GGCATTGTTCCTGAAGCGAC 59.831 55.000 0.00 0.00 0.00 5.19
6004 9497 5.376756 TTGTACCATATACCAAAGTCCCC 57.623 43.478 0.00 0.00 0.00 4.81
6039 9546 2.028385 AGGGTTAGTAGTGCTTGAACGG 60.028 50.000 0.00 0.00 0.00 4.44
6053 9564 3.226346 TGAACGGACGAACCTTAGATG 57.774 47.619 0.00 0.00 36.31 2.90
6054 9565 2.821378 TGAACGGACGAACCTTAGATGA 59.179 45.455 0.00 0.00 36.31 2.92
6057 9568 5.125900 TGAACGGACGAACCTTAGATGAATA 59.874 40.000 0.00 0.00 36.31 1.75
6252 9814 4.458951 CAATCGCTGCTATTTGTACTCC 57.541 45.455 0.00 0.00 0.00 3.85
6253 9815 2.596904 TCGCTGCTATTTGTACTCCC 57.403 50.000 0.00 0.00 0.00 4.30
6254 9816 2.108168 TCGCTGCTATTTGTACTCCCT 58.892 47.619 0.00 0.00 0.00 4.20
6255 9817 2.100916 TCGCTGCTATTTGTACTCCCTC 59.899 50.000 0.00 0.00 0.00 4.30
6256 9818 2.803492 CGCTGCTATTTGTACTCCCTCC 60.803 54.545 0.00 0.00 0.00 4.30
6257 9819 2.803492 GCTGCTATTTGTACTCCCTCCG 60.803 54.545 0.00 0.00 0.00 4.63
6258 9820 2.431057 CTGCTATTTGTACTCCCTCCGT 59.569 50.000 0.00 0.00 0.00 4.69
6259 9821 2.429610 TGCTATTTGTACTCCCTCCGTC 59.570 50.000 0.00 0.00 0.00 4.79
6260 9822 2.223994 GCTATTTGTACTCCCTCCGTCC 60.224 54.545 0.00 0.00 0.00 4.79
6261 9823 0.822164 ATTTGTACTCCCTCCGTCCG 59.178 55.000 0.00 0.00 0.00 4.79
6262 9824 0.251297 TTTGTACTCCCTCCGTCCGA 60.251 55.000 0.00 0.00 0.00 4.55
6263 9825 0.251297 TTGTACTCCCTCCGTCCGAA 60.251 55.000 0.00 0.00 0.00 4.30
6264 9826 0.251297 TGTACTCCCTCCGTCCGAAA 60.251 55.000 0.00 0.00 0.00 3.46
6265 9827 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
6266 9828 1.479730 GTACTCCCTCCGTCCGAAAAT 59.520 52.381 0.00 0.00 0.00 1.82
6267 9829 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
6268 9830 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
6269 9831 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
6270 9832 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
6271 9833 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
6272 9834 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
6273 9835 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
6274 9836 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
6275 9837 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
6276 9838 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
6277 9839 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
6278 9840 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
6279 9841 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
6280 9842 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
6281 9843 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
6282 9844 8.172484 CGTCCGAAAATACTTGTCATCAAAATA 58.828 33.333 0.00 0.00 32.87 1.40
6283 9845 9.490663 GTCCGAAAATACTTGTCATCAAAATAG 57.509 33.333 0.00 0.00 32.87 1.73
6284 9846 9.443323 TCCGAAAATACTTGTCATCAAAATAGA 57.557 29.630 0.00 0.00 32.87 1.98
6293 9855 8.971073 ACTTGTCATCAAAATAGATAAAAGGGG 58.029 33.333 0.00 0.00 32.87 4.79
6294 9856 9.189156 CTTGTCATCAAAATAGATAAAAGGGGA 57.811 33.333 0.00 0.00 32.87 4.81
6295 9857 9.713684 TTGTCATCAAAATAGATAAAAGGGGAT 57.286 29.630 0.00 0.00 0.00 3.85
6296 9858 9.135189 TGTCATCAAAATAGATAAAAGGGGATG 57.865 33.333 0.00 0.00 0.00 3.51
6297 9859 9.136323 GTCATCAAAATAGATAAAAGGGGATGT 57.864 33.333 0.00 0.00 32.47 3.06
6311 9873 8.855804 AAAAGGGGATGTATCTAGAACTAAGA 57.144 34.615 0.00 0.00 0.00 2.10
6312 9874 9.453830 AAAAGGGGATGTATCTAGAACTAAGAT 57.546 33.333 0.00 0.00 0.00 2.40
6315 9877 9.707957 AGGGGATGTATCTAGAACTAAGATATG 57.292 37.037 0.00 0.00 0.00 1.78
6316 9878 9.482175 GGGGATGTATCTAGAACTAAGATATGT 57.518 37.037 0.00 0.00 0.00 2.29
6330 9892 8.282455 ACTAAGATATGTCTACATACATCCCG 57.718 38.462 4.98 0.00 41.15 5.14
6331 9893 7.889073 ACTAAGATATGTCTACATACATCCCGT 59.111 37.037 4.98 0.00 41.15 5.28
6332 9894 7.540474 AAGATATGTCTACATACATCCCGTT 57.460 36.000 4.98 0.00 41.15 4.44
6333 9895 7.540474 AGATATGTCTACATACATCCCGTTT 57.460 36.000 4.98 0.00 41.15 3.60
6334 9896 7.963532 AGATATGTCTACATACATCCCGTTTT 58.036 34.615 4.98 0.00 41.15 2.43
6335 9897 9.085645 AGATATGTCTACATACATCCCGTTTTA 57.914 33.333 4.98 0.00 41.15 1.52
6336 9898 9.871238 GATATGTCTACATACATCCCGTTTTAT 57.129 33.333 4.98 0.00 41.15 1.40
6338 9900 8.603242 ATGTCTACATACATCCCGTTTTATTC 57.397 34.615 0.00 0.00 35.08 1.75
6339 9901 7.557724 TGTCTACATACATCCCGTTTTATTCA 58.442 34.615 0.00 0.00 0.00 2.57
6340 9902 8.208224 TGTCTACATACATCCCGTTTTATTCAT 58.792 33.333 0.00 0.00 0.00 2.57
6341 9903 9.052759 GTCTACATACATCCCGTTTTATTCATT 57.947 33.333 0.00 0.00 0.00 2.57
6342 9904 9.621629 TCTACATACATCCCGTTTTATTCATTT 57.378 29.630 0.00 0.00 0.00 2.32
6344 9906 8.925161 ACATACATCCCGTTTTATTCATTTTG 57.075 30.769 0.00 0.00 0.00 2.44
6345 9907 8.744652 ACATACATCCCGTTTTATTCATTTTGA 58.255 29.630 0.00 0.00 0.00 2.69
6346 9908 9.748708 CATACATCCCGTTTTATTCATTTTGAT 57.251 29.630 0.00 0.00 0.00 2.57
6347 9909 9.748708 ATACATCCCGTTTTATTCATTTTGATG 57.251 29.630 0.00 0.00 33.80 3.07
6348 9910 7.835822 ACATCCCGTTTTATTCATTTTGATGA 58.164 30.769 0.00 0.00 32.39 2.92
6349 9911 7.759433 ACATCCCGTTTTATTCATTTTGATGAC 59.241 33.333 0.00 0.00 32.39 3.06
6350 9912 7.220741 TCCCGTTTTATTCATTTTGATGACA 57.779 32.000 0.00 0.00 0.00 3.58
6351 9913 7.661968 TCCCGTTTTATTCATTTTGATGACAA 58.338 30.769 0.00 0.00 0.00 3.18
6352 9914 7.812191 TCCCGTTTTATTCATTTTGATGACAAG 59.188 33.333 0.00 0.00 37.32 3.16
6353 9915 7.598493 CCCGTTTTATTCATTTTGATGACAAGT 59.402 33.333 0.00 0.00 37.32 3.16
6354 9916 9.619316 CCGTTTTATTCATTTTGATGACAAGTA 57.381 29.630 0.00 0.00 37.32 2.24
6360 9922 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
6361 9923 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
6362 9924 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
6363 9925 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
6364 9926 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
6365 9927 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
6366 9928 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
6367 9929 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
6368 9930 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
6369 9931 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
6370 9932 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
6371 9933 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
6386 9948 0.447011 GGGAGTACGTCGACTGAGTG 59.553 60.000 14.70 0.00 0.00 3.51
6389 9951 2.419324 GGAGTACGTCGACTGAGTGATT 59.581 50.000 14.70 0.00 0.00 2.57
6571 10198 4.462834 TGTGAAGTAGGGAGTATGACACAG 59.537 45.833 0.00 0.00 33.10 3.66
6643 10272 2.888834 TGATTGCTGCTATCGCTGTA 57.111 45.000 16.95 0.00 37.41 2.74
6649 10278 1.777101 CTGCTATCGCTGTAGGAAGC 58.223 55.000 0.00 0.00 39.94 3.86
6682 10311 2.543012 CACACAGAGAAGAGTGTTGCAG 59.457 50.000 0.00 0.00 46.04 4.41
6709 10341 7.688167 CGACTGTTACACATATGAACATGTTTC 59.312 37.037 13.36 6.80 37.02 2.78
6724 10356 8.359642 TGAACATGTTTCTAGGGAAATTTCTTG 58.640 33.333 13.36 6.14 42.45 3.02
6758 10400 2.731976 GCTCGTAAGTGGAGAAGTGTTG 59.268 50.000 0.00 0.00 39.48 3.33
6761 10403 2.724690 CGTAAGTGGAGAAGTGTTGACG 59.275 50.000 0.00 0.00 0.00 4.35
6807 10449 7.102346 AGAGAAGTTTTCACACATATCCTCAG 58.898 38.462 0.00 0.00 0.00 3.35
6905 10548 3.270027 CCTGAATGTTTCGTGCCATCTA 58.730 45.455 0.00 0.00 0.00 1.98
6906 10549 3.689161 CCTGAATGTTTCGTGCCATCTAA 59.311 43.478 0.00 0.00 0.00 2.10
6912 10555 4.832248 TGTTTCGTGCCATCTAAGAGAAT 58.168 39.130 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.615582 TTCTCTCCTTGTGCACTAATTTATG 57.384 36.000 19.41 2.71 0.00 1.90
1 2 8.814038 AATTCTCTCCTTGTGCACTAATTTAT 57.186 30.769 19.41 0.00 0.00 1.40
38 39 4.450976 CGTGTATCCCCATTGAAATCTGA 58.549 43.478 0.00 0.00 0.00 3.27
59 60 2.268298 ACACAATTAGCCGTAAGAGCG 58.732 47.619 0.00 0.00 43.02 5.03
76 77 1.388547 TGGACTGGAAGCAACAACAC 58.611 50.000 0.00 0.00 37.60 3.32
112 113 1.077716 GGACGAATCCAACCCCCTG 60.078 63.158 0.00 0.00 45.47 4.45
148 149 9.415544 GATCAAAAGAAGCATCAACATTAAGTT 57.584 29.630 0.00 0.00 42.42 2.66
180 182 4.409187 ACCCCAGCCGTATTTTTAAGAAA 58.591 39.130 0.00 0.00 0.00 2.52
189 191 1.205460 AGGACAACCCCAGCCGTATT 61.205 55.000 0.00 0.00 36.73 1.89
190 192 1.615424 AGGACAACCCCAGCCGTAT 60.615 57.895 0.00 0.00 36.73 3.06
222 224 6.324770 CCAAGTATCCCTGCAATAAAATTCCT 59.675 38.462 0.00 0.00 0.00 3.36
240 243 7.650504 CGATGCAATGATCAATTTTCCAAGTAT 59.349 33.333 0.00 0.00 0.00 2.12
289 292 1.135333 GAAAGACCGAATCCGAGAGCT 59.865 52.381 0.00 0.00 38.22 4.09
296 299 2.194271 CGCTAGTGAAAGACCGAATCC 58.806 52.381 0.00 0.00 0.00 3.01
376 380 2.218603 GACCGTCCGCCATTATTCATT 58.781 47.619 0.00 0.00 0.00 2.57
439 443 5.670792 AGTGGTAGGAAAATCATACGTCA 57.329 39.130 0.00 0.00 34.75 4.35
459 463 7.924541 TCCCTATTACAATGTTCAAACCTAGT 58.075 34.615 0.00 0.00 0.00 2.57
501 505 0.108329 GCCAACCTAGCAAGCTCGTA 60.108 55.000 0.00 0.00 0.00 3.43
604 609 8.637099 TGAAAACATGTGGACTTTATTCAATCA 58.363 29.630 0.00 0.00 0.00 2.57
637 642 3.253432 CACTCTAGGGCTGTTTGGTTTTC 59.747 47.826 0.00 0.00 0.00 2.29
642 647 2.859165 TTCACTCTAGGGCTGTTTGG 57.141 50.000 0.00 0.00 0.00 3.28
644 649 5.045578 ACATACATTCACTCTAGGGCTGTTT 60.046 40.000 0.00 0.00 0.00 2.83
646 651 4.033709 ACATACATTCACTCTAGGGCTGT 58.966 43.478 0.00 0.00 0.00 4.40
647 652 4.375272 CACATACATTCACTCTAGGGCTG 58.625 47.826 0.00 0.00 0.00 4.85
648 653 3.181461 GCACATACATTCACTCTAGGGCT 60.181 47.826 0.00 0.00 0.00 5.19
649 654 3.134458 GCACATACATTCACTCTAGGGC 58.866 50.000 0.00 0.00 0.00 5.19
650 655 3.181475 ACGCACATACATTCACTCTAGGG 60.181 47.826 0.00 0.00 0.00 3.53
651 656 3.798878 CACGCACATACATTCACTCTAGG 59.201 47.826 0.00 0.00 0.00 3.02
652 657 4.424626 ACACGCACATACATTCACTCTAG 58.575 43.478 0.00 0.00 0.00 2.43
653 658 4.450082 ACACGCACATACATTCACTCTA 57.550 40.909 0.00 0.00 0.00 2.43
654 659 3.319137 ACACGCACATACATTCACTCT 57.681 42.857 0.00 0.00 0.00 3.24
655 660 4.862574 TCTAACACGCACATACATTCACTC 59.137 41.667 0.00 0.00 0.00 3.51
656 661 4.816392 TCTAACACGCACATACATTCACT 58.184 39.130 0.00 0.00 0.00 3.41
657 662 5.524511 TTCTAACACGCACATACATTCAC 57.475 39.130 0.00 0.00 0.00 3.18
658 663 5.388994 CGTTTCTAACACGCACATACATTCA 60.389 40.000 0.00 0.00 0.00 2.57
659 664 5.013236 CGTTTCTAACACGCACATACATTC 58.987 41.667 0.00 0.00 0.00 2.67
660 665 4.142988 CCGTTTCTAACACGCACATACATT 60.143 41.667 0.00 0.00 36.27 2.71
661 666 3.369756 CCGTTTCTAACACGCACATACAT 59.630 43.478 0.00 0.00 36.27 2.29
662 667 2.732500 CCGTTTCTAACACGCACATACA 59.267 45.455 0.00 0.00 36.27 2.29
663 668 2.988493 TCCGTTTCTAACACGCACATAC 59.012 45.455 0.00 0.00 36.27 2.39
664 669 3.300852 TCCGTTTCTAACACGCACATA 57.699 42.857 0.00 0.00 36.27 2.29
665 670 2.157834 TCCGTTTCTAACACGCACAT 57.842 45.000 0.00 0.00 36.27 3.21
666 671 1.937278 TTCCGTTTCTAACACGCACA 58.063 45.000 0.00 0.00 36.27 4.57
667 672 3.031126 GTTTTCCGTTTCTAACACGCAC 58.969 45.455 0.00 0.00 36.27 5.34
668 673 2.937799 AGTTTTCCGTTTCTAACACGCA 59.062 40.909 0.00 0.00 36.27 5.24
669 674 3.538780 GAGTTTTCCGTTTCTAACACGC 58.461 45.455 0.00 0.00 36.27 5.34
670 675 4.124594 GGAGTTTTCCGTTTCTAACACG 57.875 45.455 0.00 0.00 37.39 4.49
677 682 8.628116 TCGTAAGTAAGTGGAGTTTTCCGTTTC 61.628 40.741 0.00 0.00 42.40 2.78
678 683 6.904261 TCGTAAGTAAGTGGAGTTTTCCGTTT 60.904 38.462 0.00 0.00 42.40 3.60
679 684 5.451798 TCGTAAGTAAGTGGAGTTTTCCGTT 60.452 40.000 0.00 0.00 42.40 4.44
680 685 4.037923 TCGTAAGTAAGTGGAGTTTTCCGT 59.962 41.667 0.00 0.00 42.40 4.69
681 686 4.549458 TCGTAAGTAAGTGGAGTTTTCCG 58.451 43.478 0.00 0.00 42.40 4.30
682 687 6.161381 TGATCGTAAGTAAGTGGAGTTTTCC 58.839 40.000 0.00 0.00 40.77 3.13
683 688 7.384387 ACTTGATCGTAAGTAAGTGGAGTTTTC 59.616 37.037 0.00 0.00 39.03 2.29
684 689 7.215085 ACTTGATCGTAAGTAAGTGGAGTTTT 58.785 34.615 0.00 0.00 39.03 2.43
685 690 6.756221 ACTTGATCGTAAGTAAGTGGAGTTT 58.244 36.000 0.00 0.00 39.03 2.66
686 691 6.208994 AGACTTGATCGTAAGTAAGTGGAGTT 59.791 38.462 0.00 0.00 40.78 3.01
687 692 5.711036 AGACTTGATCGTAAGTAAGTGGAGT 59.289 40.000 0.00 0.00 40.78 3.85
688 693 6.127980 TGAGACTTGATCGTAAGTAAGTGGAG 60.128 42.308 0.00 0.00 40.78 3.86
689 694 5.708697 TGAGACTTGATCGTAAGTAAGTGGA 59.291 40.000 0.00 0.00 40.78 4.02
690 695 5.950883 TGAGACTTGATCGTAAGTAAGTGG 58.049 41.667 0.00 0.00 40.78 4.00
691 696 8.467402 AAATGAGACTTGATCGTAAGTAAGTG 57.533 34.615 0.00 0.00 40.78 3.16
692 697 8.304596 TGAAATGAGACTTGATCGTAAGTAAGT 58.695 33.333 0.00 0.00 40.78 2.24
693 698 8.689251 TGAAATGAGACTTGATCGTAAGTAAG 57.311 34.615 0.00 0.00 40.78 2.34
694 699 9.483916 TTTGAAATGAGACTTGATCGTAAGTAA 57.516 29.630 0.00 0.00 40.78 2.24
695 700 9.653287 ATTTGAAATGAGACTTGATCGTAAGTA 57.347 29.630 0.00 0.00 40.78 2.24
696 701 7.962964 TTTGAAATGAGACTTGATCGTAAGT 57.037 32.000 0.00 0.00 43.24 2.24
697 702 7.907045 CCATTTGAAATGAGACTTGATCGTAAG 59.093 37.037 18.82 0.00 0.00 2.34
698 703 7.390440 ACCATTTGAAATGAGACTTGATCGTAA 59.610 33.333 18.82 0.00 0.00 3.18
699 704 6.878923 ACCATTTGAAATGAGACTTGATCGTA 59.121 34.615 18.82 0.00 0.00 3.43
700 705 5.707298 ACCATTTGAAATGAGACTTGATCGT 59.293 36.000 18.82 1.92 0.00 3.73
701 706 6.025896 CACCATTTGAAATGAGACTTGATCG 58.974 40.000 18.82 1.32 0.00 3.69
702 707 6.917533 ACACCATTTGAAATGAGACTTGATC 58.082 36.000 18.82 0.00 0.00 2.92
703 708 6.906157 ACACCATTTGAAATGAGACTTGAT 57.094 33.333 18.82 0.00 0.00 2.57
704 709 6.713762 AACACCATTTGAAATGAGACTTGA 57.286 33.333 18.82 0.00 0.00 3.02
705 710 6.201425 CCAAACACCATTTGAAATGAGACTTG 59.799 38.462 18.82 14.61 0.00 3.16
706 711 6.127083 ACCAAACACCATTTGAAATGAGACTT 60.127 34.615 18.82 4.81 0.00 3.01
707 712 5.363580 ACCAAACACCATTTGAAATGAGACT 59.636 36.000 18.82 0.00 0.00 3.24
708 713 5.600696 ACCAAACACCATTTGAAATGAGAC 58.399 37.500 18.82 0.00 0.00 3.36
709 714 5.867903 ACCAAACACCATTTGAAATGAGA 57.132 34.783 18.82 0.00 0.00 3.27
710 715 6.282930 AGAACCAAACACCATTTGAAATGAG 58.717 36.000 18.82 12.82 0.00 2.90
711 716 6.098124 AGAGAACCAAACACCATTTGAAATGA 59.902 34.615 18.82 0.00 0.00 2.57
712 717 6.282930 AGAGAACCAAACACCATTTGAAATG 58.717 36.000 10.84 10.84 0.00 2.32
713 718 6.484364 AGAGAACCAAACACCATTTGAAAT 57.516 33.333 0.98 0.00 0.00 2.17
714 719 5.930837 AGAGAACCAAACACCATTTGAAA 57.069 34.783 0.98 0.00 0.00 2.69
715 720 6.126409 ACTAGAGAACCAAACACCATTTGAA 58.874 36.000 0.00 0.00 0.00 2.69
716 721 5.690865 ACTAGAGAACCAAACACCATTTGA 58.309 37.500 0.00 0.00 0.00 2.69
717 722 5.765182 AGACTAGAGAACCAAACACCATTTG 59.235 40.000 0.00 0.00 0.00 2.32
718 723 5.941788 AGACTAGAGAACCAAACACCATTT 58.058 37.500 0.00 0.00 0.00 2.32
719 724 5.568620 AGACTAGAGAACCAAACACCATT 57.431 39.130 0.00 0.00 0.00 3.16
720 725 5.568620 AAGACTAGAGAACCAAACACCAT 57.431 39.130 0.00 0.00 0.00 3.55
721 726 5.011738 CCTAAGACTAGAGAACCAAACACCA 59.988 44.000 0.00 0.00 0.00 4.17
722 727 5.245526 TCCTAAGACTAGAGAACCAAACACC 59.754 44.000 0.00 0.00 0.00 4.16
723 728 6.157904 GTCCTAAGACTAGAGAACCAAACAC 58.842 44.000 0.00 0.00 40.10 3.32
724 729 6.342338 GTCCTAAGACTAGAGAACCAAACA 57.658 41.667 0.00 0.00 40.10 2.83
745 750 3.808174 AGTGCTACGAACTGGAAAAAGTC 59.192 43.478 0.00 0.00 0.00 3.01
746 751 3.805207 AGTGCTACGAACTGGAAAAAGT 58.195 40.909 0.00 0.00 0.00 2.66
747 752 4.813296 AAGTGCTACGAACTGGAAAAAG 57.187 40.909 0.00 0.00 0.00 2.27
748 753 5.570234 AAAAGTGCTACGAACTGGAAAAA 57.430 34.783 0.00 0.00 0.00 1.94
749 754 5.124138 TCAAAAAGTGCTACGAACTGGAAAA 59.876 36.000 0.00 0.00 0.00 2.29
750 755 4.636648 TCAAAAAGTGCTACGAACTGGAAA 59.363 37.500 0.00 0.00 0.00 3.13
751 756 4.193090 TCAAAAAGTGCTACGAACTGGAA 58.807 39.130 0.00 0.00 0.00 3.53
752 757 3.799366 TCAAAAAGTGCTACGAACTGGA 58.201 40.909 0.00 0.00 0.00 3.86
753 758 4.545823 TTCAAAAAGTGCTACGAACTGG 57.454 40.909 0.00 0.00 0.00 4.00
754 759 6.745450 TCTTTTTCAAAAAGTGCTACGAACTG 59.255 34.615 19.82 0.00 0.00 3.16
755 760 6.745907 GTCTTTTTCAAAAAGTGCTACGAACT 59.254 34.615 19.82 0.00 0.00 3.01
756 761 6.745907 AGTCTTTTTCAAAAAGTGCTACGAAC 59.254 34.615 19.82 9.76 0.00 3.95
757 762 6.848451 AGTCTTTTTCAAAAAGTGCTACGAA 58.152 32.000 19.82 0.00 0.00 3.85
758 763 6.315393 AGAGTCTTTTTCAAAAAGTGCTACGA 59.685 34.615 19.82 0.00 0.00 3.43
759 764 6.487103 AGAGTCTTTTTCAAAAAGTGCTACG 58.513 36.000 19.82 0.00 0.00 3.51
760 765 9.783256 TTAAGAGTCTTTTTCAAAAAGTGCTAC 57.217 29.630 19.82 11.91 0.00 3.58
762 767 8.739972 TCTTAAGAGTCTTTTTCAAAAAGTGCT 58.260 29.630 19.82 18.01 0.00 4.40
763 768 8.911247 TCTTAAGAGTCTTTTTCAAAAAGTGC 57.089 30.769 19.82 14.42 0.00 4.40
767 772 9.855021 CACCTTCTTAAGAGTCTTTTTCAAAAA 57.145 29.630 11.40 0.00 0.00 1.94
768 773 7.973944 GCACCTTCTTAAGAGTCTTTTTCAAAA 59.026 33.333 11.40 0.00 0.00 2.44
769 774 7.339466 AGCACCTTCTTAAGAGTCTTTTTCAAA 59.661 33.333 11.40 0.00 0.00 2.69
770 775 6.828785 AGCACCTTCTTAAGAGTCTTTTTCAA 59.171 34.615 11.40 0.00 0.00 2.69
771 776 6.357367 AGCACCTTCTTAAGAGTCTTTTTCA 58.643 36.000 11.40 0.00 0.00 2.69
772 777 6.869315 AGCACCTTCTTAAGAGTCTTTTTC 57.131 37.500 11.40 0.00 0.00 2.29
773 778 7.265647 GAAGCACCTTCTTAAGAGTCTTTTT 57.734 36.000 11.40 0.00 37.49 1.94
774 779 6.869315 GAAGCACCTTCTTAAGAGTCTTTT 57.131 37.500 11.40 0.00 37.49 2.27
787 792 6.204882 TGCTAAAAGTCTTTAGAAGCACCTTC 59.795 38.462 18.74 0.00 44.70 3.46
788 793 6.062095 TGCTAAAAGTCTTTAGAAGCACCTT 58.938 36.000 18.74 0.00 44.70 3.50
789 794 5.621193 TGCTAAAAGTCTTTAGAAGCACCT 58.379 37.500 18.74 0.00 44.70 4.00
790 795 5.941948 TGCTAAAAGTCTTTAGAAGCACC 57.058 39.130 18.74 1.33 44.70 5.01
791 796 6.725246 TGTTGCTAAAAGTCTTTAGAAGCAC 58.275 36.000 20.88 17.27 44.70 4.40
792 797 6.935741 TGTTGCTAAAAGTCTTTAGAAGCA 57.064 33.333 18.74 18.74 44.70 3.91
793 798 8.628882 TTTTGTTGCTAAAAGTCTTTAGAAGC 57.371 30.769 15.37 15.37 44.70 3.86
804 809 7.380602 CAGGATGAGACTTTTTGTTGCTAAAAG 59.619 37.037 11.92 11.92 42.12 2.27
805 810 7.147915 ACAGGATGAGACTTTTTGTTGCTAAAA 60.148 33.333 0.00 0.00 39.69 1.52
806 811 6.321181 ACAGGATGAGACTTTTTGTTGCTAAA 59.679 34.615 0.00 0.00 39.69 1.85
807 812 5.827797 ACAGGATGAGACTTTTTGTTGCTAA 59.172 36.000 0.00 0.00 39.69 3.09
808 813 5.376625 ACAGGATGAGACTTTTTGTTGCTA 58.623 37.500 0.00 0.00 39.69 3.49
809 814 4.210331 ACAGGATGAGACTTTTTGTTGCT 58.790 39.130 0.00 0.00 39.69 3.91
810 815 4.574599 ACAGGATGAGACTTTTTGTTGC 57.425 40.909 0.00 0.00 39.69 4.17
811 816 5.750067 CCAAACAGGATGAGACTTTTTGTTG 59.250 40.000 0.00 0.00 39.69 3.33
812 817 5.422012 ACCAAACAGGATGAGACTTTTTGTT 59.578 36.000 0.00 0.00 39.69 2.83
813 818 4.956075 ACCAAACAGGATGAGACTTTTTGT 59.044 37.500 0.00 0.00 39.69 2.83
814 819 5.520376 ACCAAACAGGATGAGACTTTTTG 57.480 39.130 0.00 0.00 39.69 2.44
815 820 6.070824 ACAAACCAAACAGGATGAGACTTTTT 60.071 34.615 0.00 0.00 39.69 1.94
816 821 5.422012 ACAAACCAAACAGGATGAGACTTTT 59.578 36.000 0.00 0.00 39.69 2.27
817 822 4.956075 ACAAACCAAACAGGATGAGACTTT 59.044 37.500 0.00 0.00 39.69 2.66
818 823 4.536765 ACAAACCAAACAGGATGAGACTT 58.463 39.130 0.00 0.00 39.69 3.01
819 824 4.170468 ACAAACCAAACAGGATGAGACT 57.830 40.909 0.00 0.00 39.69 3.24
820 825 4.918810 AACAAACCAAACAGGATGAGAC 57.081 40.909 0.00 0.00 39.69 3.36
821 826 5.070001 CCTAACAAACCAAACAGGATGAGA 58.930 41.667 0.00 0.00 39.69 3.27
822 827 4.218417 CCCTAACAAACCAAACAGGATGAG 59.782 45.833 0.00 0.00 39.69 2.90
823 828 4.141135 TCCCTAACAAACCAAACAGGATGA 60.141 41.667 0.00 0.00 39.69 2.92
824 829 4.148838 TCCCTAACAAACCAAACAGGATG 58.851 43.478 0.00 0.00 46.00 3.51
825 830 4.463050 TCCCTAACAAACCAAACAGGAT 57.537 40.909 0.00 0.00 41.22 3.24
826 831 3.955524 TCCCTAACAAACCAAACAGGA 57.044 42.857 0.00 0.00 41.22 3.86
827 832 5.545063 AAATCCCTAACAAACCAAACAGG 57.455 39.130 0.00 0.00 45.67 4.00
867 872 4.442332 GGTTGTTTGGTTCGAGGGATTTTT 60.442 41.667 0.00 0.00 0.00 1.94
868 873 3.069016 GGTTGTTTGGTTCGAGGGATTTT 59.931 43.478 0.00 0.00 0.00 1.82
869 874 2.626266 GGTTGTTTGGTTCGAGGGATTT 59.374 45.455 0.00 0.00 0.00 2.17
870 875 2.235891 GGTTGTTTGGTTCGAGGGATT 58.764 47.619 0.00 0.00 0.00 3.01
871 876 1.546998 GGGTTGTTTGGTTCGAGGGAT 60.547 52.381 0.00 0.00 0.00 3.85
872 877 0.179012 GGGTTGTTTGGTTCGAGGGA 60.179 55.000 0.00 0.00 0.00 4.20
873 878 0.179001 AGGGTTGTTTGGTTCGAGGG 60.179 55.000 0.00 0.00 0.00 4.30
874 879 0.951558 CAGGGTTGTTTGGTTCGAGG 59.048 55.000 0.00 0.00 0.00 4.63
875 880 1.961793 TCAGGGTTGTTTGGTTCGAG 58.038 50.000 0.00 0.00 0.00 4.04
876 881 2.421751 TTCAGGGTTGTTTGGTTCGA 57.578 45.000 0.00 0.00 0.00 3.71
877 882 3.365969 GCTATTCAGGGTTGTTTGGTTCG 60.366 47.826 0.00 0.00 0.00 3.95
878 883 3.365969 CGCTATTCAGGGTTGTTTGGTTC 60.366 47.826 0.00 0.00 0.00 3.62
879 884 2.556622 CGCTATTCAGGGTTGTTTGGTT 59.443 45.455 0.00 0.00 0.00 3.67
880 885 2.159382 CGCTATTCAGGGTTGTTTGGT 58.841 47.619 0.00 0.00 0.00 3.67
881 886 1.135402 GCGCTATTCAGGGTTGTTTGG 60.135 52.381 0.00 0.00 37.07 3.28
882 887 1.812571 AGCGCTATTCAGGGTTGTTTG 59.187 47.619 8.99 0.00 37.07 2.93
883 888 1.812571 CAGCGCTATTCAGGGTTGTTT 59.187 47.619 10.99 0.00 39.92 2.83
884 889 1.453155 CAGCGCTATTCAGGGTTGTT 58.547 50.000 10.99 0.00 39.92 2.83
885 890 0.392998 CCAGCGCTATTCAGGGTTGT 60.393 55.000 10.99 0.00 42.20 3.32
886 891 1.718757 GCCAGCGCTATTCAGGGTTG 61.719 60.000 10.99 0.00 43.01 3.77
887 892 1.452108 GCCAGCGCTATTCAGGGTT 60.452 57.895 10.99 0.00 37.07 4.11
888 893 2.190578 GCCAGCGCTATTCAGGGT 59.809 61.111 10.99 0.00 37.07 4.34
889 894 2.969238 CGCCAGCGCTATTCAGGG 60.969 66.667 10.99 7.32 37.77 4.45
900 905 2.878406 TCTCCTTTTATTATGCGCCAGC 59.122 45.455 4.18 0.00 45.41 4.85
901 906 3.059597 CGTCTCCTTTTATTATGCGCCAG 60.060 47.826 4.18 0.00 0.00 4.85
902 907 2.869801 CGTCTCCTTTTATTATGCGCCA 59.130 45.455 4.18 0.00 0.00 5.69
903 908 2.870411 ACGTCTCCTTTTATTATGCGCC 59.130 45.455 4.18 0.00 0.00 6.53
904 909 4.271687 CAACGTCTCCTTTTATTATGCGC 58.728 43.478 0.00 0.00 0.00 6.09
905 910 4.271687 GCAACGTCTCCTTTTATTATGCG 58.728 43.478 0.00 0.00 0.00 4.73
906 911 4.497507 GGGCAACGTCTCCTTTTATTATGC 60.498 45.833 6.08 0.00 37.60 3.14
907 912 4.036380 GGGGCAACGTCTCCTTTTATTATG 59.964 45.833 6.08 0.00 37.60 1.90
908 913 4.204799 GGGGCAACGTCTCCTTTTATTAT 58.795 43.478 6.08 0.00 37.60 1.28
909 914 3.009253 TGGGGCAACGTCTCCTTTTATTA 59.991 43.478 6.08 0.00 37.60 0.98
910 915 2.224917 TGGGGCAACGTCTCCTTTTATT 60.225 45.455 6.08 0.00 37.60 1.40
911 916 1.353022 TGGGGCAACGTCTCCTTTTAT 59.647 47.619 6.08 0.00 37.60 1.40
912 917 0.766131 TGGGGCAACGTCTCCTTTTA 59.234 50.000 6.08 0.00 37.60 1.52
913 918 0.537371 CTGGGGCAACGTCTCCTTTT 60.537 55.000 6.08 0.00 37.60 2.27
914 919 1.073199 CTGGGGCAACGTCTCCTTT 59.927 57.895 6.08 0.00 37.60 3.11
915 920 2.750350 CTGGGGCAACGTCTCCTT 59.250 61.111 6.08 0.00 37.60 3.36
916 921 4.021925 GCTGGGGCAACGTCTCCT 62.022 66.667 6.08 0.00 38.54 3.69
923 928 0.968393 TTAATTCGGGCTGGGGCAAC 60.968 55.000 0.00 0.00 40.87 4.17
973 979 1.334160 GTTTGGGGTTTGGATTCCGT 58.666 50.000 0.00 0.00 0.00 4.69
1136 1142 4.899239 CATCGTCCTCCTGCCCGC 62.899 72.222 0.00 0.00 0.00 6.13
1342 3519 2.157863 GCAGTAAGAGCAAACGGAACTC 59.842 50.000 0.00 0.00 0.00 3.01
1343 3520 2.143925 GCAGTAAGAGCAAACGGAACT 58.856 47.619 0.00 0.00 0.00 3.01
1379 3563 2.825532 CCAACCACACAAAATAGGAGGG 59.174 50.000 0.00 0.00 0.00 4.30
1400 3584 5.220605 GCGGTAGGATTACTCAACAAATCAC 60.221 44.000 0.00 0.00 34.44 3.06
1445 3629 6.458751 CGCCAATATCATCATATTAACAGGGC 60.459 42.308 0.00 0.00 36.52 5.19
1601 3789 3.834726 TGGAGCCCACAACAAACG 58.165 55.556 0.00 0.00 0.00 3.60
1785 4177 7.517417 GCATAACTGAAATCGTGTTCATAGAGG 60.517 40.741 4.42 0.00 36.92 3.69
1811 4203 2.691526 TCCTTATGGTAGCAGTACGTGG 59.308 50.000 0.00 0.00 34.23 4.94
1812 4204 4.037565 TCATCCTTATGGTAGCAGTACGTG 59.962 45.833 0.00 0.00 33.61 4.49
1813 4205 4.212716 TCATCCTTATGGTAGCAGTACGT 58.787 43.478 0.00 0.00 33.61 3.57
1814 4206 4.848562 TCATCCTTATGGTAGCAGTACG 57.151 45.455 0.00 0.00 33.61 3.67
1815 4207 7.041098 CCAATTTCATCCTTATGGTAGCAGTAC 60.041 40.741 0.00 0.00 33.61 2.73
1816 4208 6.998074 CCAATTTCATCCTTATGGTAGCAGTA 59.002 38.462 0.00 0.00 33.61 2.74
1817 4209 5.829924 CCAATTTCATCCTTATGGTAGCAGT 59.170 40.000 0.00 0.00 33.61 4.40
1818 4210 5.242393 CCCAATTTCATCCTTATGGTAGCAG 59.758 44.000 0.00 0.00 33.61 4.24
2124 4582 8.009622 AGTAAGGCTATCTACAAACCTTAGAC 57.990 38.462 0.00 0.00 42.18 2.59
2295 4758 4.034510 GCATTCTTCTTATCCACGACCAAG 59.965 45.833 0.00 0.00 0.00 3.61
2338 4801 5.943416 TGGTTCATTCCATTAAGACGTTGAT 59.057 36.000 0.00 0.00 31.96 2.57
2372 4839 0.111061 TGTGGATAGGGATGCATGGC 59.889 55.000 2.46 0.00 35.65 4.40
2373 4840 2.662535 TTGTGGATAGGGATGCATGG 57.337 50.000 2.46 0.00 35.65 3.66
2417 4892 3.088789 AGTCCTACAGTCGGAACAGAT 57.911 47.619 0.00 0.00 31.13 2.90
2499 4974 2.032071 CCGTTCCCACCACTCACC 59.968 66.667 0.00 0.00 0.00 4.02
2513 4988 0.393808 ACTGTCCACAACTTTGCCGT 60.394 50.000 0.00 0.00 0.00 5.68
2523 4998 0.327924 CATTAGGGCCACTGTCCACA 59.672 55.000 6.18 0.00 39.40 4.17
2694 5170 9.923143 AATTGTGCATATCTGGATTTGAATATG 57.077 29.630 0.00 0.00 0.00 1.78
2702 5178 9.754382 GATTTGTTAATTGTGCATATCTGGATT 57.246 29.630 0.00 0.00 0.00 3.01
2704 5180 7.341512 TGGATTTGTTAATTGTGCATATCTGGA 59.658 33.333 0.00 0.00 0.00 3.86
2705 5181 7.490840 TGGATTTGTTAATTGTGCATATCTGG 58.509 34.615 0.00 0.00 0.00 3.86
2706 5182 8.407832 TCTGGATTTGTTAATTGTGCATATCTG 58.592 33.333 0.00 0.00 0.00 2.90
2707 5183 8.523915 TCTGGATTTGTTAATTGTGCATATCT 57.476 30.769 0.00 0.00 0.00 1.98
2711 5187 7.654520 GCATATCTGGATTTGTTAATTGTGCAT 59.345 33.333 0.00 0.00 0.00 3.96
2712 5188 6.979817 GCATATCTGGATTTGTTAATTGTGCA 59.020 34.615 0.00 0.00 0.00 4.57
2713 5189 6.979817 TGCATATCTGGATTTGTTAATTGTGC 59.020 34.615 0.00 0.00 0.00 4.57
2714 5190 7.975058 TGTGCATATCTGGATTTGTTAATTGTG 59.025 33.333 0.00 0.00 0.00 3.33
2715 5191 8.065473 TGTGCATATCTGGATTTGTTAATTGT 57.935 30.769 0.00 0.00 0.00 2.71
2716 5192 8.929827 TTGTGCATATCTGGATTTGTTAATTG 57.070 30.769 0.00 0.00 0.00 2.32
2721 5197 8.752187 AGTTAATTGTGCATATCTGGATTTGTT 58.248 29.630 0.00 0.00 0.00 2.83
2930 5407 3.046283 TGACTATACACCTCAGGCCAT 57.954 47.619 5.01 0.00 0.00 4.40
3047 5555 2.079158 CTGCTTTCCTCTGCATTCGAA 58.921 47.619 0.00 0.00 38.59 3.71
3179 5687 0.544697 GAGAGGGAGAGACGAGGAGT 59.455 60.000 0.00 0.00 0.00 3.85
3180 5688 0.837272 AGAGAGGGAGAGACGAGGAG 59.163 60.000 0.00 0.00 0.00 3.69
3181 5689 0.834612 GAGAGAGGGAGAGACGAGGA 59.165 60.000 0.00 0.00 0.00 3.71
3562 6320 1.950828 GGCAGACCTGACATCAGATG 58.049 55.000 10.55 9.03 46.59 2.90
3595 6353 6.489361 AGTTTGATCAAGCTCAAAGAGTTGAT 59.511 34.615 18.08 16.96 43.72 2.57
3676 6434 3.101209 CTGTGCGTGTGTGTGCTT 58.899 55.556 0.00 0.00 0.00 3.91
3724 6482 5.068198 CCAGTTAAATGCATGGTATTCAGCT 59.932 40.000 0.00 0.00 0.00 4.24
3949 6713 4.140536 TGCAACAATCACTACCATGACAA 58.859 39.130 0.00 0.00 0.00 3.18
4069 7222 8.511465 CATTGAAAGTTCAGTGTTATTTGAGG 57.489 34.615 8.05 0.00 39.29 3.86
4215 7401 3.674997 TCTTGACCTGCTCAACCATTAC 58.325 45.455 0.00 0.00 33.65 1.89
4523 7720 4.935205 TCGAGTTTGCATATGCTACTGTTT 59.065 37.500 28.74 13.58 42.66 2.83
4690 7903 3.054802 AGAAGGTTTCCAATCAGCTCGAT 60.055 43.478 0.00 0.00 35.12 3.59
5125 8567 7.550906 ACTTGACCTATTCAAAAGCATAGAGTC 59.449 37.037 0.00 0.00 43.90 3.36
5129 8571 6.375455 ACCACTTGACCTATTCAAAAGCATAG 59.625 38.462 0.00 0.00 43.90 2.23
5186 8628 9.170734 CTAAGGAAGAATTGATGAGAAATGACA 57.829 33.333 0.00 0.00 0.00 3.58
5202 8644 9.273016 CAACAGAACACTAAATCTAAGGAAGAA 57.727 33.333 0.00 0.00 37.89 2.52
5235 8677 2.274542 TGTCCTCAACCCACCATGTAT 58.725 47.619 0.00 0.00 0.00 2.29
5236 8678 1.735926 TGTCCTCAACCCACCATGTA 58.264 50.000 0.00 0.00 0.00 2.29
5268 8710 1.202879 CCAAGCCAACCACTCCACTTA 60.203 52.381 0.00 0.00 0.00 2.24
5283 8725 5.997746 TCTGACCTAATTACATATGCCAAGC 59.002 40.000 1.58 0.00 0.00 4.01
5365 8808 6.723977 TCCCTTTTTAGTGCTGATTACCAAAT 59.276 34.615 0.00 0.00 0.00 2.32
5445 8888 7.997773 AACAGATGCCTCGATAACTAGTATA 57.002 36.000 0.00 0.00 0.00 1.47
5446 8889 6.902771 AACAGATGCCTCGATAACTAGTAT 57.097 37.500 0.00 0.00 0.00 2.12
5447 8890 6.996879 AGTAACAGATGCCTCGATAACTAGTA 59.003 38.462 0.00 0.00 0.00 1.82
5448 8891 5.828859 AGTAACAGATGCCTCGATAACTAGT 59.171 40.000 0.00 0.00 0.00 2.57
5449 8892 6.320494 AGTAACAGATGCCTCGATAACTAG 57.680 41.667 0.00 0.00 0.00 2.57
5458 8901 4.631813 CAGGTACAAAGTAACAGATGCCTC 59.368 45.833 0.00 0.00 0.00 4.70
5540 8984 9.015367 TCCAAAGTTTCAATACGGAAAATATCA 57.985 29.630 0.00 0.00 38.41 2.15
5550 8994 5.551760 AGAGCATCCAAAGTTTCAATACG 57.448 39.130 0.00 0.00 33.66 3.06
5586 9030 6.183360 GGAGCTGGCAATATGTTCAAGTAAAT 60.183 38.462 0.00 0.00 0.00 1.40
5703 9193 9.256228 TGGGCAACATAAATAAATTACCAGTTA 57.744 29.630 0.00 0.00 39.74 2.24
5704 9194 8.140112 TGGGCAACATAAATAAATTACCAGTT 57.860 30.769 0.00 0.00 39.74 3.16
5705 9195 7.726033 TGGGCAACATAAATAAATTACCAGT 57.274 32.000 0.00 0.00 39.74 4.00
5706 9196 7.171337 GCATGGGCAACATAAATAAATTACCAG 59.829 37.037 0.00 0.00 37.84 4.00
5707 9197 6.989169 GCATGGGCAACATAAATAAATTACCA 59.011 34.615 0.00 0.00 37.84 3.25
5708 9198 7.420184 GCATGGGCAACATAAATAAATTACC 57.580 36.000 0.00 0.00 37.84 2.85
5768 9261 4.624015 AGCCACATTGTGATTCAAAAGTG 58.376 39.130 18.33 10.07 41.45 3.16
6004 9497 5.422214 ACTAACCCTGTGTGAATAGGAAG 57.578 43.478 0.00 0.00 36.11 3.46
6057 9568 9.971922 GCTGAAGTAATGCCATAATTCTTATTT 57.028 29.630 7.33 0.00 32.59 1.40
6071 9582 4.035675 GTGGTGGAATAGCTGAAGTAATGC 59.964 45.833 0.00 0.00 0.00 3.56
6126 9641 7.229506 ACCTTTCTACTACGGGTATATGTACAC 59.770 40.741 0.00 0.00 32.25 2.90
6167 9682 7.027760 CACAAACTATCACGAGTATGTACAGT 58.972 38.462 0.33 0.00 0.00 3.55
6251 9813 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
6252 9814 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
6253 9815 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
6254 9816 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
6255 9817 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
6256 9818 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
6257 9819 9.490663 CTATTTTGATGACAAGTATTTTCGGAC 57.509 33.333 0.00 0.00 37.32 4.79
6258 9820 9.443323 TCTATTTTGATGACAAGTATTTTCGGA 57.557 29.630 0.00 0.00 37.32 4.55
6267 9829 8.971073 CCCCTTTTATCTATTTTGATGACAAGT 58.029 33.333 0.00 0.00 37.32 3.16
6268 9830 9.189156 TCCCCTTTTATCTATTTTGATGACAAG 57.811 33.333 0.00 0.00 37.32 3.16
6269 9831 9.713684 ATCCCCTTTTATCTATTTTGATGACAA 57.286 29.630 0.00 0.00 0.00 3.18
6270 9832 9.135189 CATCCCCTTTTATCTATTTTGATGACA 57.865 33.333 0.00 0.00 0.00 3.58
6271 9833 9.136323 ACATCCCCTTTTATCTATTTTGATGAC 57.864 33.333 0.00 0.00 32.39 3.06
6285 9847 9.947189 TCTTAGTTCTAGATACATCCCCTTTTA 57.053 33.333 0.00 0.00 0.00 1.52
6286 9848 8.855804 TCTTAGTTCTAGATACATCCCCTTTT 57.144 34.615 0.00 0.00 0.00 2.27
6289 9851 9.707957 CATATCTTAGTTCTAGATACATCCCCT 57.292 37.037 0.00 0.00 37.41 4.79
6290 9852 9.482175 ACATATCTTAGTTCTAGATACATCCCC 57.518 37.037 0.00 0.00 37.41 4.81
6304 9866 8.740906 CGGGATGTATGTAGACATATCTTAGTT 58.259 37.037 5.69 0.00 40.18 2.24
6305 9867 7.889073 ACGGGATGTATGTAGACATATCTTAGT 59.111 37.037 5.69 1.27 40.18 2.24
6306 9868 8.282455 ACGGGATGTATGTAGACATATCTTAG 57.718 38.462 5.69 0.76 40.18 2.18
6307 9869 8.645814 AACGGGATGTATGTAGACATATCTTA 57.354 34.615 5.69 0.00 40.18 2.10
6308 9870 7.540474 AACGGGATGTATGTAGACATATCTT 57.460 36.000 5.69 0.00 40.18 2.40
6309 9871 7.540474 AAACGGGATGTATGTAGACATATCT 57.460 36.000 5.69 0.00 40.18 1.98
6310 9872 9.871238 ATAAAACGGGATGTATGTAGACATATC 57.129 33.333 5.69 2.00 40.18 1.63
6312 9874 9.701098 GAATAAAACGGGATGTATGTAGACATA 57.299 33.333 0.00 0.00 40.18 2.29
6313 9875 8.208224 TGAATAAAACGGGATGTATGTAGACAT 58.792 33.333 0.08 0.08 42.82 3.06
6314 9876 7.557724 TGAATAAAACGGGATGTATGTAGACA 58.442 34.615 0.00 0.00 0.00 3.41
6315 9877 8.603242 ATGAATAAAACGGGATGTATGTAGAC 57.397 34.615 0.00 0.00 0.00 2.59
6316 9878 9.621629 AAATGAATAAAACGGGATGTATGTAGA 57.378 29.630 0.00 0.00 0.00 2.59
6319 9881 8.744652 TCAAAATGAATAAAACGGGATGTATGT 58.255 29.630 0.00 0.00 0.00 2.29
6320 9882 9.748708 ATCAAAATGAATAAAACGGGATGTATG 57.251 29.630 0.00 0.00 0.00 2.39
6321 9883 9.748708 CATCAAAATGAATAAAACGGGATGTAT 57.251 29.630 0.00 0.00 34.61 2.29
6322 9884 8.961634 TCATCAAAATGAATAAAACGGGATGTA 58.038 29.630 0.00 0.00 38.97 2.29
6323 9885 7.759433 GTCATCAAAATGAATAAAACGGGATGT 59.241 33.333 0.00 0.00 43.42 3.06
6324 9886 7.758980 TGTCATCAAAATGAATAAAACGGGATG 59.241 33.333 0.00 0.00 43.42 3.51
6325 9887 7.835822 TGTCATCAAAATGAATAAAACGGGAT 58.164 30.769 0.00 0.00 43.42 3.85
6326 9888 7.220741 TGTCATCAAAATGAATAAAACGGGA 57.779 32.000 0.00 0.00 43.42 5.14
6327 9889 7.598493 ACTTGTCATCAAAATGAATAAAACGGG 59.402 33.333 0.00 0.00 43.42 5.28
6328 9890 8.519492 ACTTGTCATCAAAATGAATAAAACGG 57.481 30.769 0.00 0.00 43.42 4.44
6335 9897 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
6336 9898 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
6337 9899 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
6338 9900 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
6339 9901 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
6340 9902 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
6341 9903 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
6342 9904 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
6343 9905 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
6344 9906 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
6345 9907 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
6346 9908 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
6347 9909 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
6348 9910 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
6349 9911 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
6350 9912 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
6351 9913 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
6352 9914 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
6353 9915 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
6354 9916 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
6355 9917 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
6356 9918 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
6357 9919 2.273449 GTACTCCCTCCGTCCGGA 59.727 66.667 0.00 0.00 42.90 5.14
6358 9920 3.207669 CGTACTCCCTCCGTCCGG 61.208 72.222 0.00 0.00 0.00 5.14
6359 9921 2.437359 ACGTACTCCCTCCGTCCG 60.437 66.667 0.00 0.00 0.00 4.79
6360 9922 2.467826 CGACGTACTCCCTCCGTCC 61.468 68.421 5.91 0.00 46.03 4.79
6361 9923 1.448540 TCGACGTACTCCCTCCGTC 60.449 63.158 0.00 0.00 45.49 4.79
6362 9924 1.743252 GTCGACGTACTCCCTCCGT 60.743 63.158 0.00 0.00 37.56 4.69
6363 9925 1.449246 AGTCGACGTACTCCCTCCG 60.449 63.158 10.46 0.00 0.00 4.63
6364 9926 0.392193 TCAGTCGACGTACTCCCTCC 60.392 60.000 10.46 0.00 0.00 4.30
6365 9927 1.008329 CTCAGTCGACGTACTCCCTC 58.992 60.000 10.46 0.00 0.00 4.30
6366 9928 0.324285 ACTCAGTCGACGTACTCCCT 59.676 55.000 10.46 0.00 0.00 4.20
6367 9929 0.447011 CACTCAGTCGACGTACTCCC 59.553 60.000 10.46 0.00 0.00 4.30
6368 9930 1.436600 TCACTCAGTCGACGTACTCC 58.563 55.000 10.46 0.00 0.00 3.85
6369 9931 3.743567 AATCACTCAGTCGACGTACTC 57.256 47.619 10.46 0.00 0.00 2.59
6370 9932 3.501062 TGAAATCACTCAGTCGACGTACT 59.499 43.478 10.46 0.00 0.00 2.73
6371 9933 3.818387 TGAAATCACTCAGTCGACGTAC 58.182 45.455 10.46 0.00 0.00 3.67
6377 9939 8.560374 TCATAGTAGTATGAAATCACTCAGTCG 58.440 37.037 16.39 0.00 41.79 4.18
6386 9948 9.868277 AATAGCAGCTCATAGTAGTATGAAATC 57.132 33.333 18.66 11.80 43.67 2.17
6389 9951 9.698309 GAAAATAGCAGCTCATAGTAGTATGAA 57.302 33.333 18.66 5.93 43.67 2.57
6444 10009 6.957920 TTCCATGTGAACAAGAAGATCAAA 57.042 33.333 0.00 0.00 30.22 2.69
6469 10034 1.552792 TGCGGATGTCAGAACCATGTA 59.447 47.619 0.00 0.00 0.00 2.29
6474 10039 2.309528 TACATGCGGATGTCAGAACC 57.690 50.000 26.60 0.00 42.14 3.62
6475 10040 3.246226 GTGATACATGCGGATGTCAGAAC 59.754 47.826 26.60 15.85 42.14 3.01
6478 10043 2.825205 TGTGATACATGCGGATGTCAG 58.175 47.619 26.60 0.00 42.14 3.51
6571 10198 7.751768 ATTTCCAAGAATAGCTATAGTTGGC 57.248 36.000 27.67 9.16 35.43 4.52
6608 10235 9.520204 AGCAGCAATCATTAACAATATTTGTAC 57.480 29.630 0.00 0.00 44.59 2.90
6643 10272 2.438021 TGTGAAATATAGCCCGCTTCCT 59.562 45.455 0.00 0.00 0.00 3.36
6649 10278 4.322080 TCTCTGTGTGAAATATAGCCCG 57.678 45.455 0.00 0.00 0.00 6.13
6709 10341 9.632638 TCCAGATTTATCAAGAAATTTCCCTAG 57.367 33.333 14.61 2.91 0.00 3.02
6724 10356 4.441415 CACTTACGAGCGTCCAGATTTATC 59.559 45.833 0.00 0.00 0.00 1.75
6758 10400 1.146041 TAGGTGCCATGCCATCGTC 59.854 57.895 0.00 0.00 0.00 4.20
6761 10403 1.767759 AAAGTAGGTGCCATGCCATC 58.232 50.000 0.00 0.00 0.00 3.51
6807 10449 0.942252 GGTTGTTGGTTGTCCTCGAC 59.058 55.000 0.00 0.00 34.23 4.20
6905 10548 7.574592 GCTTACAGCAAATCTCACAATTCTCTT 60.575 37.037 0.00 0.00 41.89 2.85
6906 10549 6.128063 GCTTACAGCAAATCTCACAATTCTCT 60.128 38.462 0.00 0.00 41.89 3.10
6912 10555 3.754965 AGGCTTACAGCAAATCTCACAA 58.245 40.909 0.00 0.00 44.75 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.