Multiple sequence alignment - TraesCS3A01G202600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G202600 chr3A 100.000 4558 0 0 1 4558 343234883 343230326 0.000000e+00 8418.0
1 TraesCS3A01G202600 chr3A 100.000 1886 0 0 4810 6695 343230074 343228189 0.000000e+00 3483.0
2 TraesCS3A01G202600 chr3A 84.870 423 46 12 6284 6693 672184376 672184793 1.740000e-110 411.0
3 TraesCS3A01G202600 chr3A 98.953 191 2 0 3681 3871 631289674 631289864 6.430000e-90 342.0
4 TraesCS3A01G202600 chr3A 98.919 185 2 0 3687 3871 275852434 275852250 1.390000e-86 331.0
5 TraesCS3A01G202600 chr3A 96.575 146 3 2 4317 4462 498250792 498250649 2.410000e-59 241.0
6 TraesCS3A01G202600 chr3A 97.059 136 3 1 4327 4462 57867681 57867547 1.880000e-55 228.0
7 TraesCS3A01G202600 chr3A 97.143 35 0 1 6235 6268 343228618 343228584 2.610000e-04 58.4
8 TraesCS3A01G202600 chr3A 97.143 35 0 1 6266 6300 343228649 343228616 2.610000e-04 58.4
9 TraesCS3A01G202600 chr3D 97.102 1622 27 10 674 2289 268144018 268142411 0.000000e+00 2717.0
10 TraesCS3A01G202600 chr3D 97.047 1287 18 6 4810 6085 268141234 268139957 0.000000e+00 2148.0
11 TraesCS3A01G202600 chr3D 98.698 461 6 0 3866 4326 268142097 268141637 0.000000e+00 819.0
12 TraesCS3A01G202600 chr3D 96.639 357 10 2 3345 3700 268142422 268142067 5.780000e-165 592.0
13 TraesCS3A01G202600 chr3D 83.848 421 53 11 6284 6695 580329774 580329360 2.930000e-103 387.0
14 TraesCS3A01G202600 chr3D 95.455 132 5 1 6134 6265 268070670 268070540 6.800000e-50 209.0
15 TraesCS3A01G202600 chr3D 100.000 106 0 0 4453 4558 268141635 268141530 5.300000e-46 196.0
16 TraesCS3A01G202600 chr3D 84.956 113 12 4 4216 4328 570500795 570500688 7.100000e-20 110.0
17 TraesCS3A01G202600 chr3D 84.211 114 12 5 4216 4328 35710707 35710815 9.180000e-19 106.0
18 TraesCS3A01G202600 chr3B 97.085 1544 27 5 748 2289 292020406 292021933 0.000000e+00 2586.0
19 TraesCS3A01G202600 chr3B 93.858 1498 39 11 4810 6265 292023108 292024594 0.000000e+00 2207.0
20 TraesCS3A01G202600 chr3B 92.614 677 46 4 1 675 292018643 292019317 0.000000e+00 970.0
21 TraesCS3A01G202600 chr3B 98.048 461 9 0 3866 4326 292022246 292022706 0.000000e+00 802.0
22 TraesCS3A01G202600 chr3B 93.240 429 27 2 6266 6693 292024564 292024991 1.230000e-176 630.0
23 TraesCS3A01G202600 chr3B 96.639 357 9 3 3345 3700 292021922 292022276 2.080000e-164 590.0
24 TraesCS3A01G202600 chr3B 85.610 410 46 11 6284 6684 258169504 258169909 1.040000e-112 418.0
25 TraesCS3A01G202600 chr3B 97.959 196 2 2 3676 3871 353864595 353864788 8.320000e-89 339.0
26 TraesCS3A01G202600 chr3B 100.000 106 0 0 4453 4558 292022708 292022813 5.300000e-46 196.0
27 TraesCS3A01G202600 chr3B 90.698 86 6 2 674 757 292019374 292019459 5.490000e-21 113.0
28 TraesCS3A01G202600 chr1B 92.093 1037 62 10 2290 3317 255502182 255503207 0.000000e+00 1443.0
29 TraesCS3A01G202600 chr1B 95.745 141 5 1 4315 4455 306097513 306097652 6.760000e-55 226.0
30 TraesCS3A01G202600 chr4A 89.233 678 67 5 1 675 596867109 596867783 0.000000e+00 843.0
31 TraesCS3A01G202600 chr4A 83.046 696 78 21 2588 3265 632152233 632152906 4.470000e-166 595.0
32 TraesCS3A01G202600 chr4A 98.438 192 3 0 3680 3871 450790073 450790264 8.320000e-89 339.0
33 TraesCS3A01G202600 chr4A 94.853 136 7 0 2290 2425 632152045 632152180 5.260000e-51 213.0
34 TraesCS3A01G202600 chr2A 89.249 679 66 6 1 675 203893655 203894330 0.000000e+00 843.0
35 TraesCS3A01G202600 chr2A 88.791 678 70 5 1 675 2338153 2337479 0.000000e+00 826.0
36 TraesCS3A01G202600 chr2A 99.465 187 1 0 3685 3871 402915784 402915970 2.310000e-89 340.0
37 TraesCS3A01G202600 chr1A 88.938 678 69 5 1 675 579170095 579170769 0.000000e+00 832.0
38 TraesCS3A01G202600 chr1A 85.372 417 45 10 6284 6693 353664710 353664303 1.040000e-112 418.0
39 TraesCS3A01G202600 chr1A 98.454 194 2 1 3678 3871 487492106 487491914 2.310000e-89 340.0
40 TraesCS3A01G202600 chr1A 78.659 492 76 16 2886 3350 428536267 428536756 3.920000e-77 300.0
41 TraesCS3A01G202600 chr1A 89.912 228 16 1 2598 2825 428535824 428536044 3.060000e-73 287.0
42 TraesCS3A01G202600 chr1A 100.000 129 0 0 4325 4453 247312050 247311922 8.680000e-59 239.0
43 TraesCS3A01G202600 chr1A 97.080 137 2 2 4317 4453 14170056 14170190 5.220000e-56 230.0
44 TraesCS3A01G202600 chr1A 94.118 136 8 0 2290 2425 428532340 428532475 2.450000e-49 207.0
45 TraesCS3A01G202600 chr1A 97.059 34 1 0 4216 4249 77099302 77099335 2.610000e-04 58.4
46 TraesCS3A01G202600 chr1D 88.954 679 66 7 1 674 138202732 138203406 0.000000e+00 830.0
47 TraesCS3A01G202600 chr1D 80.838 788 84 28 2588 3351 438009191 438008447 2.110000e-154 556.0
48 TraesCS3A01G202600 chr1D 86.842 418 48 6 6282 6695 442153874 442153460 1.700000e-125 460.0
49 TraesCS3A01G202600 chr1D 85.036 421 48 12 6284 6695 493735540 493735126 1.340000e-111 414.0
50 TraesCS3A01G202600 chr1D 84.086 421 52 11 6284 6695 226470980 226471394 6.290000e-105 392.0
51 TraesCS3A01G202600 chr1D 99.462 186 1 0 3686 3871 333497981 333498166 8.320000e-89 339.0
52 TraesCS3A01G202600 chr6D 88.643 678 71 5 1 675 12855470 12856144 0.000000e+00 821.0
53 TraesCS3A01G202600 chr6D 83.439 314 47 3 3035 3348 17261235 17260927 3.060000e-73 287.0
54 TraesCS3A01G202600 chr4D 88.839 672 65 7 1 669 448164358 448165022 0.000000e+00 817.0
55 TraesCS3A01G202600 chr4D 84.071 113 13 4 4216 4328 23910481 23910374 3.300000e-18 104.0
56 TraesCS3A01G202600 chr7D 88.348 678 73 5 1 675 600256747 600257421 0.000000e+00 809.0
57 TraesCS3A01G202600 chr7D 81.731 624 75 16 2754 3352 238987479 238988088 1.010000e-132 484.0
58 TraesCS3A01G202600 chr7D 82.971 552 47 20 2588 3114 238986556 238987085 7.910000e-124 455.0
59 TraesCS3A01G202600 chr2D 83.291 784 85 20 2588 3348 14769605 14768845 0.000000e+00 680.0
60 TraesCS3A01G202600 chr2D 85.142 424 45 14 6278 6690 30739278 30739694 1.040000e-112 418.0
61 TraesCS3A01G202600 chr2D 86.722 241 17 7 2289 2529 65262915 65262690 3.100000e-63 254.0
62 TraesCS3A01G202600 chr2D 94.964 139 7 0 2287 2425 14769796 14769658 1.130000e-52 219.0
63 TraesCS3A01G202600 chr5A 82.404 807 96 27 2576 3350 628848525 628847733 0.000000e+00 662.0
64 TraesCS3A01G202600 chr5A 99.231 130 1 0 4324 4453 81476815 81476686 1.120000e-57 235.0
65 TraesCS3A01G202600 chr5A 97.778 135 3 0 4326 4460 569174449 569174315 4.040000e-57 233.0
66 TraesCS3A01G202600 chr5A 97.101 138 3 1 4324 4460 581101952 581102089 1.450000e-56 231.0
67 TraesCS3A01G202600 chr5A 93.919 148 8 1 4311 4458 569702127 569701981 8.740000e-54 222.0
68 TraesCS3A01G202600 chr5D 85.203 419 31 15 2613 3029 547712157 547712546 1.050000e-107 401.0
69 TraesCS3A01G202600 chr5D 86.182 275 35 2 3035 3307 547713073 547713346 1.830000e-75 294.0
70 TraesCS3A01G202600 chr5D 85.165 182 25 1 2290 2471 330899763 330899942 1.150000e-42 185.0
71 TraesCS3A01G202600 chr5D 100.000 31 0 0 2527 2557 547712160 547712190 2.610000e-04 58.4
72 TraesCS3A01G202600 chr7A 98.964 193 2 0 3679 3871 330446075 330446267 4.970000e-91 346.0
73 TraesCS3A01G202600 chr7A 92.771 166 12 0 2289 2454 323445113 323444948 2.410000e-59 241.0
74 TraesCS3A01G202600 chr5B 88.070 285 20 4 2576 2860 373564024 373563754 6.470000e-85 326.0
75 TraesCS3A01G202600 chr5B 84.848 66 6 4 3272 3335 158791071 158791134 5.610000e-06 63.9
76 TraesCS3A01G202600 chr5B 96.875 32 1 0 5496 5527 402435585 402435554 3.000000e-03 54.7
77 TraesCS3A01G202600 chr2B 95.146 206 8 2 3667 3871 29613012 29613216 2.330000e-84 324.0
78 TraesCS3A01G202600 chr2B 89.697 165 17 0 2290 2454 788523328 788523164 1.890000e-50 211.0
79 TraesCS3A01G202600 chrUn 89.130 184 20 0 2288 2471 166599 166416 5.220000e-56 230.0
80 TraesCS3A01G202600 chrUn 93.243 148 10 0 2290 2437 85300740 85300593 1.130000e-52 219.0
81 TraesCS3A01G202600 chr4B 96.970 33 1 0 5495 5527 549577091 549577123 1.000000e-03 56.5
82 TraesCS3A01G202600 chr4B 100.000 29 0 0 5499 5527 36434037 36434009 3.000000e-03 54.7
83 TraesCS3A01G202600 chr4B 100.000 29 0 0 5499 5527 36442694 36442666 3.000000e-03 54.7
84 TraesCS3A01G202600 chr4B 96.875 32 1 0 5496 5527 61624139 61624108 3.000000e-03 54.7
85 TraesCS3A01G202600 chr4B 96.875 32 1 0 5496 5527 86908996 86909027 3.000000e-03 54.7
86 TraesCS3A01G202600 chr7B 100.000 29 0 0 5499 5527 681633395 681633367 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G202600 chr3A 343228189 343234883 6694 True 3004.450000 8418 98.571500 1 6695 4 chr3A.!!$R4 6694
1 TraesCS3A01G202600 chr3D 268139957 268144018 4061 True 1294.400000 2717 97.897200 674 6085 5 chr3D.!!$R4 5411
2 TraesCS3A01G202600 chr3B 292018643 292024991 6348 False 1011.750000 2586 95.272750 1 6693 8 chr3B.!!$F3 6692
3 TraesCS3A01G202600 chr1B 255502182 255503207 1025 False 1443.000000 1443 92.093000 2290 3317 1 chr1B.!!$F1 1027
4 TraesCS3A01G202600 chr4A 596867109 596867783 674 False 843.000000 843 89.233000 1 675 1 chr4A.!!$F2 674
5 TraesCS3A01G202600 chr4A 632152045 632152906 861 False 404.000000 595 88.949500 2290 3265 2 chr4A.!!$F3 975
6 TraesCS3A01G202600 chr2A 203893655 203894330 675 False 843.000000 843 89.249000 1 675 1 chr2A.!!$F1 674
7 TraesCS3A01G202600 chr2A 2337479 2338153 674 True 826.000000 826 88.791000 1 675 1 chr2A.!!$R1 674
8 TraesCS3A01G202600 chr1A 579170095 579170769 674 False 832.000000 832 88.938000 1 675 1 chr1A.!!$F3 674
9 TraesCS3A01G202600 chr1A 428532340 428536756 4416 False 264.666667 300 87.563000 2290 3350 3 chr1A.!!$F4 1060
10 TraesCS3A01G202600 chr1D 138202732 138203406 674 False 830.000000 830 88.954000 1 674 1 chr1D.!!$F1 673
11 TraesCS3A01G202600 chr1D 438008447 438009191 744 True 556.000000 556 80.838000 2588 3351 1 chr1D.!!$R1 763
12 TraesCS3A01G202600 chr6D 12855470 12856144 674 False 821.000000 821 88.643000 1 675 1 chr6D.!!$F1 674
13 TraesCS3A01G202600 chr4D 448164358 448165022 664 False 817.000000 817 88.839000 1 669 1 chr4D.!!$F1 668
14 TraesCS3A01G202600 chr7D 600256747 600257421 674 False 809.000000 809 88.348000 1 675 1 chr7D.!!$F1 674
15 TraesCS3A01G202600 chr7D 238986556 238988088 1532 False 469.500000 484 82.351000 2588 3352 2 chr7D.!!$F2 764
16 TraesCS3A01G202600 chr2D 14768845 14769796 951 True 449.500000 680 89.127500 2287 3348 2 chr2D.!!$R2 1061
17 TraesCS3A01G202600 chr5A 628847733 628848525 792 True 662.000000 662 82.404000 2576 3350 1 chr5A.!!$R4 774
18 TraesCS3A01G202600 chr5D 547712157 547713346 1189 False 251.133333 401 90.461667 2527 3307 3 chr5D.!!$F2 780

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
974 1998 0.042131 ACTGGATCCCCCACGAGTAA 59.958 55.000 9.90 0.00 40.82 2.24 F
1022 2046 1.153369 CACCCGTCATGGCAGGTAG 60.153 63.158 4.54 0.00 35.87 3.18 F
2015 3039 1.276138 CTTGGTTTTGGCTCCAATCCC 59.724 52.381 15.56 12.51 41.89 3.85 F
3782 9558 0.031111 CCAGGAGGTCACCCATCCTA 60.031 60.000 4.27 0.00 36.69 2.94 F
4342 10118 0.033796 ATGTACTCCCTCCGTTCCGA 60.034 55.000 0.00 0.00 0.00 4.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2873 7303 0.340208 TCTTCCCTCTTCCCTCCTCC 59.660 60.000 0.00 0.0 0.00 4.30 R
2875 7305 0.341609 CCTCTTCCCTCTTCCCTCCT 59.658 60.000 0.00 0.0 0.00 3.69 R
3844 9620 0.034089 AGGGTTGTGATAGGCTTGGC 60.034 55.000 0.00 0.0 0.00 4.52 R
5625 11458 1.142748 CTCCTCGTCATCTGCACCC 59.857 63.158 0.00 0.0 0.00 4.61 R
6083 11916 1.935933 AGCGTTCACGTCAAGAAACT 58.064 45.000 0.62 0.0 42.22 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.364989 GATTCTATGTATAGAGCTTTGATCCAC 57.635 37.037 2.21 0.00 40.23 4.02
36 37 2.868044 GCTTTGATCCACTCTGACGTGT 60.868 50.000 0.00 0.00 33.07 4.49
118 120 1.754803 TGGTATCTTCATCGCGGAGTT 59.245 47.619 6.13 0.00 0.00 3.01
133 135 5.346822 TCGCGGAGTTATTCTTACAAAAGAC 59.653 40.000 6.13 0.00 41.48 3.01
159 161 9.342308 CAACCTTATTAAGAGGAATTAGCATGA 57.658 33.333 13.15 0.00 37.72 3.07
184 187 5.437060 AGTACACAATGTGTCTTTTGTCCT 58.563 37.500 23.34 4.52 43.92 3.85
262 265 3.817647 GGCCAGTCATCCAAATAGCTTAG 59.182 47.826 0.00 0.00 0.00 2.18
279 282 5.291905 GCTTAGGGCTTGTATCTTCCTTA 57.708 43.478 0.00 0.00 38.06 2.69
280 283 5.681639 GCTTAGGGCTTGTATCTTCCTTAA 58.318 41.667 0.00 0.00 38.06 1.85
333 336 7.148086 GCTACATGGGATTGATCACAAGTTTAA 60.148 37.037 9.11 0.00 44.50 1.52
345 349 8.141268 TGATCACAAGTTTAAAATTCTTCCCAC 58.859 33.333 0.00 0.00 0.00 4.61
346 350 7.654022 TCACAAGTTTAAAATTCTTCCCACT 57.346 32.000 0.00 0.00 0.00 4.00
348 352 6.200854 CACAAGTTTAAAATTCTTCCCACTGC 59.799 38.462 0.00 0.00 0.00 4.40
487 492 9.527157 TTATGGTCCTTTCTACAATGAATGAAA 57.473 29.630 0.00 0.00 0.00 2.69
540 545 2.913060 GGAGGCTACGGCGAGGAT 60.913 66.667 16.62 0.00 39.81 3.24
542 547 1.580437 GAGGCTACGGCGAGGATAC 59.420 63.158 16.62 0.00 39.81 2.24
546 553 1.202498 GGCTACGGCGAGGATACTTTT 60.202 52.381 16.62 0.00 42.27 2.27
547 554 2.035066 GGCTACGGCGAGGATACTTTTA 59.965 50.000 16.62 0.00 42.27 1.52
579 586 5.456763 GGGTGGTAGCATGATCTTAGGATTT 60.457 44.000 0.00 0.00 31.46 2.17
685 750 1.710996 TTTGTTGGCCCCTTCTCGGA 61.711 55.000 0.00 0.00 33.16 4.55
686 751 1.710996 TTGTTGGCCCCTTCTCGGAA 61.711 55.000 0.00 0.00 33.16 4.30
711 776 2.922740 AAGAAACAACCCTAGCGTGA 57.077 45.000 0.00 0.00 0.00 4.35
765 1789 2.814336 GAGAAAATCCTTGCGTGGAACT 59.186 45.455 1.54 0.71 39.85 3.01
864 1888 2.726351 CCGTCTCTCTCCCCTTGGC 61.726 68.421 0.00 0.00 0.00 4.52
865 1889 1.984570 CGTCTCTCTCCCCTTGGCA 60.985 63.158 0.00 0.00 0.00 4.92
974 1998 0.042131 ACTGGATCCCCCACGAGTAA 59.958 55.000 9.90 0.00 40.82 2.24
1001 2025 6.685116 GCACCAGAGTAAGAAGCAATAGAGAT 60.685 42.308 0.00 0.00 0.00 2.75
1022 2046 1.153369 CACCCGTCATGGCAGGTAG 60.153 63.158 4.54 0.00 35.87 3.18
1241 2265 9.822727 ATCAAGGGTTCTTCTTTTCCTAATTTA 57.177 29.630 0.00 0.00 0.00 1.40
1468 2492 2.422597 CCTAGGCAACAACGATGAACA 58.577 47.619 0.00 0.00 41.41 3.18
1625 2649 8.569641 TGTACCAGGTAAATTGATTTTGTACAC 58.430 33.333 0.00 0.00 0.00 2.90
1918 2942 7.873739 AGCTTATAGTTGAATTGCAAACAAC 57.126 32.000 28.98 28.98 42.51 3.32
2015 3039 1.276138 CTTGGTTTTGGCTCCAATCCC 59.724 52.381 15.56 12.51 41.89 3.85
2067 3091 1.672881 GTGTGCAACTGAAGCTGAACT 59.327 47.619 0.00 0.00 38.04 3.01
2150 3174 2.366435 ACGGGGTGGGGGTATCTG 60.366 66.667 0.00 0.00 0.00 2.90
2285 3311 2.711542 CACCTTGTGTGGACTATTCCC 58.288 52.381 0.00 0.00 42.01 3.97
2308 3334 5.415221 CCACCAATGTTTTTATGGCGTAAT 58.585 37.500 0.00 0.00 37.77 1.89
2529 3562 2.614481 CGTGGTTGCCCAAGTAGTACAT 60.614 50.000 2.52 0.00 44.15 2.29
2547 4407 3.538379 TGCAGTCAGGCAGTACATG 57.462 52.632 0.00 0.00 39.25 3.21
2625 6859 4.081030 CAGCGCAACAGGCAGTCG 62.081 66.667 11.47 0.00 45.17 4.18
2626 6860 4.299547 AGCGCAACAGGCAGTCGA 62.300 61.111 11.47 0.00 45.17 4.20
2627 6861 4.077188 GCGCAACAGGCAGTCGAC 62.077 66.667 7.70 7.70 45.17 4.20
2638 6872 2.163815 AGGCAGTCGACAGTACATGTAC 59.836 50.000 25.51 25.51 44.17 2.90
2639 6873 2.094906 GGCAGTCGACAGTACATGTACA 60.095 50.000 32.02 12.93 44.17 2.90
2640 6874 3.428999 GGCAGTCGACAGTACATGTACAT 60.429 47.826 32.02 21.91 44.17 2.29
2643 6877 4.793731 CAGTCGACAGTACATGTACATCAC 59.206 45.833 32.02 24.82 44.17 3.06
2752 6990 1.411651 GGGGAGCTGGGGAGATACAC 61.412 65.000 0.00 0.00 0.00 2.90
2837 7075 1.692042 CAGCTGGATCTGGAGGGGT 60.692 63.158 5.57 0.00 0.00 4.95
2868 7298 1.544151 GAAGGAGGGGAAAGGGGGT 60.544 63.158 0.00 0.00 0.00 4.95
2869 7299 1.857348 AAGGAGGGGAAAGGGGGTG 60.857 63.158 0.00 0.00 0.00 4.61
2870 7300 3.347590 GGAGGGGAAAGGGGGTGG 61.348 72.222 0.00 0.00 0.00 4.61
2871 7301 2.534533 GAGGGGAAAGGGGGTGGT 60.535 66.667 0.00 0.00 0.00 4.16
2872 7302 2.863988 AGGGGAAAGGGGGTGGTG 60.864 66.667 0.00 0.00 0.00 4.17
2873 7303 3.992641 GGGGAAAGGGGGTGGTGG 61.993 72.222 0.00 0.00 0.00 4.61
2874 7304 3.992641 GGGAAAGGGGGTGGTGGG 61.993 72.222 0.00 0.00 0.00 4.61
2875 7305 2.861974 GGAAAGGGGGTGGTGGGA 60.862 66.667 0.00 0.00 0.00 4.37
2876 7306 2.763902 GAAAGGGGGTGGTGGGAG 59.236 66.667 0.00 0.00 0.00 4.30
2877 7307 2.863988 AAAGGGGGTGGTGGGAGG 60.864 66.667 0.00 0.00 0.00 4.30
2878 7308 3.452141 AAAGGGGGTGGTGGGAGGA 62.452 63.158 0.00 0.00 0.00 3.71
2879 7309 3.891432 AAGGGGGTGGTGGGAGGAG 62.891 68.421 0.00 0.00 0.00 3.69
2882 7312 4.348495 GGGTGGTGGGAGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
2883 7313 2.204090 GGTGGTGGGAGGAGGGAA 60.204 66.667 0.00 0.00 0.00 3.97
2884 7314 2.301738 GGTGGTGGGAGGAGGGAAG 61.302 68.421 0.00 0.00 0.00 3.46
2885 7315 1.229529 GTGGTGGGAGGAGGGAAGA 60.230 63.158 0.00 0.00 0.00 2.87
2886 7316 1.081092 TGGTGGGAGGAGGGAAGAG 59.919 63.158 0.00 0.00 0.00 2.85
2887 7317 1.690985 GGTGGGAGGAGGGAAGAGG 60.691 68.421 0.00 0.00 0.00 3.69
2888 7318 1.690985 GTGGGAGGAGGGAAGAGGG 60.691 68.421 0.00 0.00 0.00 4.30
2889 7319 1.866997 TGGGAGGAGGGAAGAGGGA 60.867 63.158 0.00 0.00 0.00 4.20
2890 7320 1.396594 GGGAGGAGGGAAGAGGGAA 59.603 63.158 0.00 0.00 0.00 3.97
2891 7321 0.692756 GGGAGGAGGGAAGAGGGAAG 60.693 65.000 0.00 0.00 0.00 3.46
2892 7322 0.340208 GGAGGAGGGAAGAGGGAAGA 59.660 60.000 0.00 0.00 0.00 2.87
2893 7323 1.691163 GGAGGAGGGAAGAGGGAAGAG 60.691 61.905 0.00 0.00 0.00 2.85
2894 7324 0.341609 AGGAGGGAAGAGGGAAGAGG 59.658 60.000 0.00 0.00 0.00 3.69
2895 7325 0.692756 GGAGGGAAGAGGGAAGAGGG 60.693 65.000 0.00 0.00 0.00 4.30
2896 7326 0.692756 GAGGGAAGAGGGAAGAGGGG 60.693 65.000 0.00 0.00 0.00 4.79
2916 8121 2.359011 GGCGGGTGGAGGGAAAAT 59.641 61.111 0.00 0.00 0.00 1.82
2919 8124 2.052104 CGGGTGGAGGGAAAATGGC 61.052 63.158 0.00 0.00 0.00 4.40
2928 8133 2.491621 GAAAATGGCTCGCAGGGC 59.508 61.111 0.00 0.00 0.00 5.19
3042 8776 2.279120 CCATGTCCGCTCTCGCTC 60.279 66.667 0.00 0.00 0.00 5.03
3043 8777 2.780094 CCATGTCCGCTCTCGCTCT 61.780 63.158 0.00 0.00 0.00 4.09
3044 8778 1.299014 CATGTCCGCTCTCGCTCTC 60.299 63.158 0.00 0.00 0.00 3.20
3045 8779 2.829206 ATGTCCGCTCTCGCTCTCG 61.829 63.158 0.00 0.00 0.00 4.04
3071 8825 1.627834 CCTCTGGAGTCTGGAAAGCTT 59.372 52.381 0.00 0.00 0.00 3.74
3101 8855 0.525761 GCCGCTGGCTAATTGTTCAA 59.474 50.000 11.61 0.00 46.69 2.69
3209 8965 4.142491 GGCGACCAAAAACACATCATATGA 60.142 41.667 8.10 8.10 0.00 2.15
3247 9023 1.374885 CGTGTATGGCGGACACCAA 60.375 57.895 14.02 0.00 44.65 3.67
3335 9111 2.337101 GCGACGATATAAGGACGCG 58.663 57.895 3.53 3.53 37.06 6.01
3338 9114 2.222886 GCGACGATATAAGGACGCGATA 60.223 50.000 15.93 0.00 37.06 2.92
3340 9116 4.020518 CGACGATATAAGGACGCGATAAG 58.979 47.826 15.93 1.25 0.00 1.73
3345 9121 5.283247 CGATATAAGGACGCGATAAGAACAC 59.717 44.000 15.93 0.00 0.00 3.32
3462 9238 1.087771 GCGACCCACAATAACCCGAG 61.088 60.000 0.00 0.00 0.00 4.63
3706 9482 8.693542 TGAATTACTTACTTACTTACGAAGCC 57.306 34.615 0.00 0.00 0.00 4.35
3707 9483 8.526147 TGAATTACTTACTTACTTACGAAGCCT 58.474 33.333 0.00 0.00 0.00 4.58
3708 9484 9.363763 GAATTACTTACTTACTTACGAAGCCTT 57.636 33.333 0.00 0.00 0.00 4.35
3709 9485 9.716531 AATTACTTACTTACTTACGAAGCCTTT 57.283 29.630 0.00 0.00 0.00 3.11
3710 9486 9.716531 ATTACTTACTTACTTACGAAGCCTTTT 57.283 29.630 0.00 0.00 0.00 2.27
3713 9489 9.363763 ACTTACTTACTTACGAAGCCTTTTATC 57.636 33.333 0.00 0.00 0.00 1.75
3714 9490 8.707938 TTACTTACTTACGAAGCCTTTTATCC 57.292 34.615 0.00 0.00 0.00 2.59
3715 9491 6.111382 ACTTACTTACGAAGCCTTTTATCCC 58.889 40.000 0.00 0.00 0.00 3.85
3716 9492 4.563140 ACTTACGAAGCCTTTTATCCCA 57.437 40.909 0.00 0.00 0.00 4.37
3717 9493 4.913784 ACTTACGAAGCCTTTTATCCCAA 58.086 39.130 0.00 0.00 0.00 4.12
3718 9494 5.318630 ACTTACGAAGCCTTTTATCCCAAA 58.681 37.500 0.00 0.00 0.00 3.28
3719 9495 5.182570 ACTTACGAAGCCTTTTATCCCAAAC 59.817 40.000 0.00 0.00 0.00 2.93
3720 9496 3.492337 ACGAAGCCTTTTATCCCAAACA 58.508 40.909 0.00 0.00 0.00 2.83
3721 9497 3.892588 ACGAAGCCTTTTATCCCAAACAA 59.107 39.130 0.00 0.00 0.00 2.83
3722 9498 4.022329 ACGAAGCCTTTTATCCCAAACAAG 60.022 41.667 0.00 0.00 0.00 3.16
3723 9499 4.022329 CGAAGCCTTTTATCCCAAACAAGT 60.022 41.667 0.00 0.00 0.00 3.16
3724 9500 5.508994 CGAAGCCTTTTATCCCAAACAAGTT 60.509 40.000 0.00 0.00 0.00 2.66
3725 9501 5.213891 AGCCTTTTATCCCAAACAAGTTG 57.786 39.130 0.00 0.00 36.94 3.16
3734 9510 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
3735 9511 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
3736 9512 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
3737 9513 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
3738 9514 2.846950 ACAAGTTGGGGTAGGCTAGAT 58.153 47.619 7.96 0.00 0.00 1.98
3739 9515 4.003584 ACAAGTTGGGGTAGGCTAGATA 57.996 45.455 7.96 0.00 0.00 1.98
3740 9516 4.567857 ACAAGTTGGGGTAGGCTAGATAT 58.432 43.478 7.96 0.00 0.00 1.63
3741 9517 4.348168 ACAAGTTGGGGTAGGCTAGATATG 59.652 45.833 7.96 0.00 0.00 1.78
3742 9518 4.487282 AGTTGGGGTAGGCTAGATATGA 57.513 45.455 0.00 0.00 0.00 2.15
3743 9519 4.827789 AGTTGGGGTAGGCTAGATATGAA 58.172 43.478 0.00 0.00 0.00 2.57
3744 9520 5.224441 AGTTGGGGTAGGCTAGATATGAAA 58.776 41.667 0.00 0.00 0.00 2.69
3745 9521 5.071923 AGTTGGGGTAGGCTAGATATGAAAC 59.928 44.000 0.00 0.00 0.00 2.78
3746 9522 3.908103 TGGGGTAGGCTAGATATGAAACC 59.092 47.826 0.00 0.00 0.00 3.27
3747 9523 3.263681 GGGGTAGGCTAGATATGAAACCC 59.736 52.174 7.65 7.65 43.82 4.11
3748 9524 4.168883 GGGTAGGCTAGATATGAAACCCT 58.831 47.826 8.73 0.00 41.75 4.34
3749 9525 4.597940 GGGTAGGCTAGATATGAAACCCTT 59.402 45.833 8.73 0.00 41.75 3.95
3750 9526 5.073280 GGGTAGGCTAGATATGAAACCCTTT 59.927 44.000 8.73 0.00 41.75 3.11
3751 9527 6.231951 GGTAGGCTAGATATGAAACCCTTTC 58.768 44.000 0.00 0.00 40.08 2.62
3759 9535 2.249844 TGAAACCCTTTCACGAGGAC 57.750 50.000 0.00 0.00 44.21 3.85
3760 9536 1.766496 TGAAACCCTTTCACGAGGACT 59.234 47.619 0.00 0.00 44.21 3.85
3761 9537 2.171870 TGAAACCCTTTCACGAGGACTT 59.828 45.455 0.00 0.00 44.21 3.01
3762 9538 2.545537 AACCCTTTCACGAGGACTTC 57.454 50.000 0.00 0.00 39.25 3.01
3763 9539 0.685660 ACCCTTTCACGAGGACTTCC 59.314 55.000 0.00 0.00 39.25 3.46
3764 9540 0.036294 CCCTTTCACGAGGACTTCCC 60.036 60.000 0.00 0.00 39.25 3.97
3765 9541 0.685097 CCTTTCACGAGGACTTCCCA 59.315 55.000 0.00 0.00 39.25 4.37
3766 9542 1.338200 CCTTTCACGAGGACTTCCCAG 60.338 57.143 0.00 0.00 39.25 4.45
3767 9543 0.685097 TTTCACGAGGACTTCCCAGG 59.315 55.000 0.00 0.00 37.41 4.45
3768 9544 0.178944 TTCACGAGGACTTCCCAGGA 60.179 55.000 0.00 0.00 37.41 3.86
3769 9545 0.612174 TCACGAGGACTTCCCAGGAG 60.612 60.000 0.00 0.00 37.41 3.69
3770 9546 1.305381 ACGAGGACTTCCCAGGAGG 60.305 63.158 0.00 0.00 37.41 4.30
3771 9547 1.305381 CGAGGACTTCCCAGGAGGT 60.305 63.158 0.31 0.31 37.15 3.85
3772 9548 1.324005 CGAGGACTTCCCAGGAGGTC 61.324 65.000 18.15 18.15 46.33 3.85
3775 9551 1.984020 GACTTCCCAGGAGGTCACC 59.016 63.158 20.66 0.00 46.32 4.02
3776 9552 1.539124 ACTTCCCAGGAGGTCACCC 60.539 63.158 0.00 0.00 36.75 4.61
3777 9553 1.538876 CTTCCCAGGAGGTCACCCA 60.539 63.158 0.00 0.00 36.75 4.51
3778 9554 0.916358 CTTCCCAGGAGGTCACCCAT 60.916 60.000 0.00 0.00 36.75 4.00
3779 9555 0.914417 TTCCCAGGAGGTCACCCATC 60.914 60.000 0.00 0.00 36.75 3.51
3780 9556 2.378634 CCCAGGAGGTCACCCATCC 61.379 68.421 0.00 0.00 0.00 3.51
3781 9557 1.307343 CCAGGAGGTCACCCATCCT 60.307 63.158 0.00 0.00 38.30 3.24
3782 9558 0.031111 CCAGGAGGTCACCCATCCTA 60.031 60.000 4.27 0.00 36.69 2.94
3783 9559 1.418334 CAGGAGGTCACCCATCCTAG 58.582 60.000 4.27 0.00 36.69 3.02
3784 9560 1.019650 AGGAGGTCACCCATCCTAGT 58.980 55.000 2.60 0.00 36.91 2.57
3785 9561 2.091278 CAGGAGGTCACCCATCCTAGTA 60.091 54.545 4.27 0.00 36.69 1.82
3786 9562 2.091222 AGGAGGTCACCCATCCTAGTAC 60.091 54.545 2.60 0.00 36.91 2.73
3787 9563 2.091222 GGAGGTCACCCATCCTAGTACT 60.091 54.545 0.00 0.00 33.83 2.73
3788 9564 3.139770 GGAGGTCACCCATCCTAGTACTA 59.860 52.174 1.89 1.89 33.83 1.82
3789 9565 4.143543 GAGGTCACCCATCCTAGTACTAC 58.856 52.174 0.00 0.00 33.83 2.73
3790 9566 3.792684 AGGTCACCCATCCTAGTACTACT 59.207 47.826 0.00 0.00 31.66 2.57
3791 9567 4.141205 AGGTCACCCATCCTAGTACTACTC 60.141 50.000 0.00 0.00 31.66 2.59
3792 9568 4.141205 GGTCACCCATCCTAGTACTACTCT 60.141 50.000 0.00 0.00 0.00 3.24
3793 9569 5.065235 GTCACCCATCCTAGTACTACTCTC 58.935 50.000 0.00 0.00 0.00 3.20
3794 9570 4.066490 CACCCATCCTAGTACTACTCTCG 58.934 52.174 0.00 0.00 0.00 4.04
3795 9571 3.075884 CCCATCCTAGTACTACTCTCGC 58.924 54.545 0.00 0.00 0.00 5.03
3796 9572 3.075884 CCATCCTAGTACTACTCTCGCC 58.924 54.545 0.00 0.00 0.00 5.54
3797 9573 2.926778 TCCTAGTACTACTCTCGCCC 57.073 55.000 0.00 0.00 0.00 6.13
3798 9574 2.121948 TCCTAGTACTACTCTCGCCCA 58.878 52.381 0.00 0.00 0.00 5.36
3799 9575 2.507058 TCCTAGTACTACTCTCGCCCAA 59.493 50.000 0.00 0.00 0.00 4.12
3800 9576 3.054139 TCCTAGTACTACTCTCGCCCAAA 60.054 47.826 0.00 0.00 0.00 3.28
3801 9577 3.890147 CCTAGTACTACTCTCGCCCAAAT 59.110 47.826 0.00 0.00 0.00 2.32
3802 9578 3.802948 AGTACTACTCTCGCCCAAATG 57.197 47.619 0.00 0.00 0.00 2.32
3803 9579 2.431057 AGTACTACTCTCGCCCAAATGG 59.569 50.000 0.00 0.00 37.09 3.16
3824 9600 4.783764 GGTTTCATACCCAAAAGACTGG 57.216 45.455 0.00 0.00 41.43 4.00
3825 9601 3.056821 GGTTTCATACCCAAAAGACTGGC 60.057 47.826 0.00 0.00 41.43 4.85
3826 9602 3.806949 TTCATACCCAAAAGACTGGCT 57.193 42.857 0.00 0.00 34.88 4.75
3827 9603 4.919774 TTCATACCCAAAAGACTGGCTA 57.080 40.909 0.00 0.00 34.88 3.93
3828 9604 4.487714 TCATACCCAAAAGACTGGCTAG 57.512 45.455 0.00 0.00 34.88 3.42
3829 9605 3.844211 TCATACCCAAAAGACTGGCTAGT 59.156 43.478 0.69 0.69 40.66 2.57
3830 9606 4.288626 TCATACCCAAAAGACTGGCTAGTT 59.711 41.667 3.47 0.00 37.25 2.24
3831 9607 3.595190 ACCCAAAAGACTGGCTAGTTT 57.405 42.857 3.47 0.00 37.25 2.66
3832 9608 3.910989 ACCCAAAAGACTGGCTAGTTTT 58.089 40.909 3.47 1.40 37.25 2.43
3833 9609 4.286707 ACCCAAAAGACTGGCTAGTTTTT 58.713 39.130 12.22 12.22 41.44 1.94
3834 9610 5.451354 ACCCAAAAGACTGGCTAGTTTTTA 58.549 37.500 17.28 0.00 39.50 1.52
3835 9611 5.301045 ACCCAAAAGACTGGCTAGTTTTTAC 59.699 40.000 17.28 0.00 39.50 2.01
3836 9612 5.449304 CCAAAAGACTGGCTAGTTTTTACG 58.551 41.667 17.28 12.06 39.50 3.18
3837 9613 5.008316 CCAAAAGACTGGCTAGTTTTTACGT 59.992 40.000 17.28 1.78 39.50 3.57
3838 9614 6.459161 CCAAAAGACTGGCTAGTTTTTACGTT 60.459 38.462 17.28 1.45 39.50 3.99
3839 9615 5.668558 AAGACTGGCTAGTTTTTACGTTG 57.331 39.130 3.47 0.00 37.25 4.10
3840 9616 4.062991 AGACTGGCTAGTTTTTACGTTGG 58.937 43.478 3.47 0.00 37.25 3.77
3841 9617 2.551032 ACTGGCTAGTTTTTACGTTGGC 59.449 45.455 0.00 0.00 31.66 4.52
3842 9618 2.812011 CTGGCTAGTTTTTACGTTGGCT 59.188 45.455 0.00 0.00 0.00 4.75
3843 9619 2.809696 TGGCTAGTTTTTACGTTGGCTC 59.190 45.455 0.00 0.00 0.00 4.70
3844 9620 2.159747 GGCTAGTTTTTACGTTGGCTCG 60.160 50.000 0.00 1.70 0.00 5.03
3845 9621 2.723923 GCTAGTTTTTACGTTGGCTCGC 60.724 50.000 0.00 0.00 0.00 5.03
3846 9622 0.589708 AGTTTTTACGTTGGCTCGCC 59.410 50.000 0.00 0.00 0.00 5.54
3847 9623 0.308376 GTTTTTACGTTGGCTCGCCA 59.692 50.000 6.52 6.52 45.63 5.69
3857 9633 3.724494 GCTCGCCAAGCCTATCAC 58.276 61.111 0.00 0.00 45.92 3.06
3858 9634 1.153369 GCTCGCCAAGCCTATCACA 60.153 57.895 0.00 0.00 45.92 3.58
3859 9635 0.744414 GCTCGCCAAGCCTATCACAA 60.744 55.000 0.00 0.00 45.92 3.33
3860 9636 1.009829 CTCGCCAAGCCTATCACAAC 58.990 55.000 0.00 0.00 0.00 3.32
3861 9637 0.392461 TCGCCAAGCCTATCACAACC 60.392 55.000 0.00 0.00 0.00 3.77
3862 9638 1.376609 CGCCAAGCCTATCACAACCC 61.377 60.000 0.00 0.00 0.00 4.11
3863 9639 0.034089 GCCAAGCCTATCACAACCCT 60.034 55.000 0.00 0.00 0.00 4.34
3864 9640 1.616994 GCCAAGCCTATCACAACCCTT 60.617 52.381 0.00 0.00 0.00 3.95
4179 9955 7.083062 TGAGAATCTTGGTATGGCTATGATT 57.917 36.000 0.00 0.00 35.95 2.57
4297 10073 8.261522 CAGAGGAGGTATTCTTAGCTTTAGTTT 58.738 37.037 0.00 0.00 36.32 2.66
4326 10102 9.979578 TCTAATTTTGTATGTTCTTTGCAATGT 57.020 25.926 11.67 0.00 0.00 2.71
4329 10105 9.762933 AATTTTGTATGTTCTTTGCAATGTACT 57.237 25.926 18.48 9.82 0.00 2.73
4330 10106 8.795786 TTTTGTATGTTCTTTGCAATGTACTC 57.204 30.769 18.48 11.63 0.00 2.59
4331 10107 6.494893 TGTATGTTCTTTGCAATGTACTCC 57.505 37.500 18.48 9.76 0.00 3.85
4332 10108 5.414454 TGTATGTTCTTTGCAATGTACTCCC 59.586 40.000 18.48 9.51 0.00 4.30
4333 10109 4.098914 TGTTCTTTGCAATGTACTCCCT 57.901 40.909 18.48 0.00 0.00 4.20
4334 10110 4.072131 TGTTCTTTGCAATGTACTCCCTC 58.928 43.478 18.48 0.00 0.00 4.30
4335 10111 3.350219 TCTTTGCAATGTACTCCCTCC 57.650 47.619 11.67 0.00 0.00 4.30
4336 10112 2.009774 CTTTGCAATGTACTCCCTCCG 58.990 52.381 0.00 0.00 0.00 4.63
4337 10113 0.981183 TTGCAATGTACTCCCTCCGT 59.019 50.000 0.00 0.00 0.00 4.69
4338 10114 0.981183 TGCAATGTACTCCCTCCGTT 59.019 50.000 0.00 0.00 0.00 4.44
4339 10115 1.066430 TGCAATGTACTCCCTCCGTTC 60.066 52.381 0.00 0.00 0.00 3.95
4340 10116 1.742750 GCAATGTACTCCCTCCGTTCC 60.743 57.143 0.00 0.00 0.00 3.62
4341 10117 0.822164 AATGTACTCCCTCCGTTCCG 59.178 55.000 0.00 0.00 0.00 4.30
4342 10118 0.033796 ATGTACTCCCTCCGTTCCGA 60.034 55.000 0.00 0.00 0.00 4.55
4343 10119 0.251297 TGTACTCCCTCCGTTCCGAA 60.251 55.000 0.00 0.00 0.00 4.30
4344 10120 1.109609 GTACTCCCTCCGTTCCGAAT 58.890 55.000 0.00 0.00 0.00 3.34
4345 10121 1.479730 GTACTCCCTCCGTTCCGAATT 59.520 52.381 0.00 0.00 0.00 2.17
4346 10122 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
4347 10123 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
4348 10124 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
4349 10125 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
4350 10126 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
4351 10127 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
4352 10128 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
4353 10129 3.368116 CCTCCGTTCCGAATTACTTGTCT 60.368 47.826 0.00 0.00 0.00 3.41
4354 10130 4.243270 CTCCGTTCCGAATTACTTGTCTT 58.757 43.478 0.00 0.00 0.00 3.01
4355 10131 3.991773 TCCGTTCCGAATTACTTGTCTTG 59.008 43.478 0.00 0.00 0.00 3.02
4356 10132 3.124636 CCGTTCCGAATTACTTGTCTTGG 59.875 47.826 0.00 0.00 0.00 3.61
4357 10133 3.991773 CGTTCCGAATTACTTGTCTTGGA 59.008 43.478 0.00 0.00 0.00 3.53
4358 10134 4.630069 CGTTCCGAATTACTTGTCTTGGAT 59.370 41.667 0.00 0.00 0.00 3.41
4359 10135 5.121768 CGTTCCGAATTACTTGTCTTGGATT 59.878 40.000 0.00 0.00 0.00 3.01
4360 10136 6.348213 CGTTCCGAATTACTTGTCTTGGATTT 60.348 38.462 0.00 0.00 0.00 2.17
4361 10137 6.494893 TCCGAATTACTTGTCTTGGATTTG 57.505 37.500 0.00 0.00 0.00 2.32
4362 10138 6.001460 TCCGAATTACTTGTCTTGGATTTGT 58.999 36.000 0.00 0.00 0.00 2.83
4363 10139 6.148811 TCCGAATTACTTGTCTTGGATTTGTC 59.851 38.462 0.00 0.00 0.00 3.18
4364 10140 6.149474 CCGAATTACTTGTCTTGGATTTGTCT 59.851 38.462 0.00 0.00 0.00 3.41
4365 10141 7.333423 CCGAATTACTTGTCTTGGATTTGTCTA 59.667 37.037 0.00 0.00 0.00 2.59
4366 10142 8.383619 CGAATTACTTGTCTTGGATTTGTCTAG 58.616 37.037 0.00 0.00 0.00 2.43
4367 10143 9.436957 GAATTACTTGTCTTGGATTTGTCTAGA 57.563 33.333 0.00 0.00 0.00 2.43
4368 10144 9.965902 AATTACTTGTCTTGGATTTGTCTAGAT 57.034 29.630 0.00 0.00 0.00 1.98
4370 10146 9.871238 TTACTTGTCTTGGATTTGTCTAGATAC 57.129 33.333 0.00 0.00 0.00 2.24
4371 10147 7.036220 ACTTGTCTTGGATTTGTCTAGATACG 58.964 38.462 0.00 0.00 0.00 3.06
4372 10148 5.902681 TGTCTTGGATTTGTCTAGATACGG 58.097 41.667 0.00 0.00 0.00 4.02
4373 10149 5.655090 TGTCTTGGATTTGTCTAGATACGGA 59.345 40.000 0.00 0.00 0.00 4.69
4374 10150 6.323996 TGTCTTGGATTTGTCTAGATACGGAT 59.676 38.462 0.00 0.00 0.00 4.18
4375 10151 6.642950 GTCTTGGATTTGTCTAGATACGGATG 59.357 42.308 0.00 0.00 0.00 3.51
4376 10152 6.323996 TCTTGGATTTGTCTAGATACGGATGT 59.676 38.462 0.00 0.00 0.00 3.06
4377 10153 7.504574 TCTTGGATTTGTCTAGATACGGATGTA 59.495 37.037 0.00 0.00 34.45 2.29
4378 10154 7.776618 TGGATTTGTCTAGATACGGATGTAT 57.223 36.000 0.00 0.00 43.97 2.29
4394 10170 8.466617 ACGGATGTATCTAGACTCATTTTAGT 57.533 34.615 11.25 7.70 0.00 2.24
4395 10171 8.353684 ACGGATGTATCTAGACTCATTTTAGTG 58.646 37.037 11.25 3.85 0.00 2.74
4396 10172 7.327275 CGGATGTATCTAGACTCATTTTAGTGC 59.673 40.741 11.25 0.00 0.00 4.40
4397 10173 8.364142 GGATGTATCTAGACTCATTTTAGTGCT 58.636 37.037 11.25 0.00 0.00 4.40
4400 10176 9.628500 TGTATCTAGACTCATTTTAGTGCTAGA 57.372 33.333 0.00 0.00 38.76 2.43
4404 10180 9.069082 TCTAGACTCATTTTAGTGCTAGATACC 57.931 37.037 0.00 0.00 34.69 2.73
4405 10181 7.906199 AGACTCATTTTAGTGCTAGATACCT 57.094 36.000 0.00 0.00 0.00 3.08
4406 10182 7.947282 AGACTCATTTTAGTGCTAGATACCTC 58.053 38.462 0.00 0.00 0.00 3.85
4407 10183 7.014808 AGACTCATTTTAGTGCTAGATACCTCC 59.985 40.741 0.00 0.00 0.00 4.30
4408 10184 6.085555 TCATTTTAGTGCTAGATACCTCCG 57.914 41.667 0.00 0.00 0.00 4.63
4409 10185 5.597182 TCATTTTAGTGCTAGATACCTCCGT 59.403 40.000 0.00 0.00 0.00 4.69
4410 10186 6.774170 TCATTTTAGTGCTAGATACCTCCGTA 59.226 38.462 0.00 0.00 0.00 4.02
4411 10187 7.450634 TCATTTTAGTGCTAGATACCTCCGTAT 59.549 37.037 0.00 0.00 37.92 3.06
4423 10199 7.690952 GATACCTCCGTATCTAGACAAATCT 57.309 40.000 0.00 0.00 45.11 2.40
4424 10200 8.789825 GATACCTCCGTATCTAGACAAATCTA 57.210 38.462 0.00 0.00 45.11 1.98
4425 10201 9.228949 GATACCTCCGTATCTAGACAAATCTAA 57.771 37.037 0.00 0.00 45.11 2.10
4426 10202 7.513371 ACCTCCGTATCTAGACAAATCTAAG 57.487 40.000 0.00 0.00 36.98 2.18
4427 10203 7.288560 ACCTCCGTATCTAGACAAATCTAAGA 58.711 38.462 0.00 0.00 36.98 2.10
4428 10204 7.229106 ACCTCCGTATCTAGACAAATCTAAGAC 59.771 40.741 0.00 0.00 36.98 3.01
4429 10205 7.228906 CCTCCGTATCTAGACAAATCTAAGACA 59.771 40.741 0.00 0.00 36.98 3.41
4430 10206 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
4431 10207 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
4432 10208 8.407064 CCGTATCTAGACAAATCTAAGACAAGT 58.593 37.037 0.00 0.00 36.98 3.16
4440 10216 9.793259 AGACAAATCTAAGACAAGTAATTTGGA 57.207 29.630 9.60 0.00 38.04 3.53
4443 10219 9.329913 CAAATCTAAGACAAGTAATTTGGAACG 57.670 33.333 0.00 0.00 41.25 3.95
4444 10220 7.611213 ATCTAAGACAAGTAATTTGGAACGG 57.389 36.000 0.00 0.00 41.25 4.44
4445 10221 6.761312 TCTAAGACAAGTAATTTGGAACGGA 58.239 36.000 0.00 0.00 41.25 4.69
4446 10222 5.941948 AAGACAAGTAATTTGGAACGGAG 57.058 39.130 0.00 0.00 41.25 4.63
4447 10223 4.324267 AGACAAGTAATTTGGAACGGAGG 58.676 43.478 0.00 0.00 41.25 4.30
4448 10224 3.418047 ACAAGTAATTTGGAACGGAGGG 58.582 45.455 0.00 0.00 41.25 4.30
4449 10225 3.073356 ACAAGTAATTTGGAACGGAGGGA 59.927 43.478 0.00 0.00 41.25 4.20
4450 10226 3.629142 AGTAATTTGGAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
4451 10227 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
4938 10758 5.294356 TGTTCCATTCACCGTAGCATATAC 58.706 41.667 0.00 0.00 0.00 1.47
4982 10802 5.871465 TGCATGAAAGATTTACTTGCGTA 57.129 34.783 0.00 0.00 36.97 4.42
5250 11080 4.199310 GAGTTTCCATTATGTGCAGGCTA 58.801 43.478 0.00 0.00 0.00 3.93
5304 11134 5.237561 GGAAAAGAAACTCTCTGGAAGACAC 59.762 44.000 0.00 0.00 38.67 3.67
5513 11343 4.392445 CAGTTGCTGAAGAAGATGAGGAAG 59.608 45.833 0.00 0.00 32.44 3.46
5514 11344 4.285517 AGTTGCTGAAGAAGATGAGGAAGA 59.714 41.667 0.00 0.00 0.00 2.87
5515 11345 4.468765 TGCTGAAGAAGATGAGGAAGAG 57.531 45.455 0.00 0.00 0.00 2.85
5516 11346 3.197333 TGCTGAAGAAGATGAGGAAGAGG 59.803 47.826 0.00 0.00 0.00 3.69
5517 11347 3.450457 GCTGAAGAAGATGAGGAAGAGGA 59.550 47.826 0.00 0.00 0.00 3.71
5518 11348 4.441913 GCTGAAGAAGATGAGGAAGAGGAG 60.442 50.000 0.00 0.00 0.00 3.69
5625 11458 1.153353 AAACGTGCCGTCCTAATGTG 58.847 50.000 0.00 0.00 39.99 3.21
5637 11470 2.092968 TCCTAATGTGGGTGCAGATGAC 60.093 50.000 0.00 0.00 0.00 3.06
5810 11643 3.963374 TGTGTGTTTTCCCCATCATTCAA 59.037 39.130 0.00 0.00 0.00 2.69
5960 11793 6.244883 CGTGTAATTTATCGTGTTTTTCGTCC 59.755 38.462 0.00 0.00 0.00 4.79
6120 11967 5.418310 ACGCTATTGGTGTTATGCATTAC 57.582 39.130 3.54 6.72 34.69 1.89
6128 11975 6.538189 TGGTGTTATGCATTACACGATATG 57.462 37.500 31.45 0.00 44.27 1.78
6166 12031 7.416664 GGTTTGATGCAAATCAGCTTATCCTTA 60.417 37.037 0.00 0.00 34.89 2.69
6207 12072 9.027202 TCTACACTAGATTATGTAACAACACCA 57.973 33.333 0.00 0.00 31.09 4.17
6218 12083 4.863689 TGTAACAACACCATATACGTTCCG 59.136 41.667 0.00 0.00 0.00 4.30
6223 12088 3.709987 ACACCATATACGTTCCGCTTAC 58.290 45.455 0.00 0.00 0.00 2.34
6264 12129 9.831737 CATATATGATACAAACTAGCAAAAGGC 57.168 33.333 6.92 0.00 45.30 4.35
6297 12162 4.662278 TGATACAAACTAGCAAAAGGCCT 58.338 39.130 0.00 0.00 46.50 5.19
6300 12165 2.623416 ACAAACTAGCAAAAGGCCTGTC 59.377 45.455 5.69 0.00 46.50 3.51
6301 12166 1.911057 AACTAGCAAAAGGCCTGTCC 58.089 50.000 5.69 0.00 46.50 4.02
6371 12237 5.930569 TGCTGCATCATTGAGATACACTATC 59.069 40.000 0.00 0.00 34.43 2.08
6607 12473 5.545658 TTTCTAGAATGGACGAACATTGC 57.454 39.130 5.89 6.27 40.92 3.56
6625 12491 6.949715 ACATTGCTATGAAAAATGGTGGAAT 58.050 32.000 15.23 0.00 35.95 3.01
6627 12493 8.538701 ACATTGCTATGAAAAATGGTGGAATAA 58.461 29.630 15.23 0.00 35.95 1.40
6628 12494 9.550406 CATTGCTATGAAAAATGGTGGAATAAT 57.450 29.630 1.51 0.00 33.37 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 9.506018 TTCAATCTTCTTGTTATGATCAACTGA 57.494 29.630 0.00 0.00 0.00 3.41
108 110 6.035758 GTCTTTTGTAAGAATAACTCCGCGAT 59.964 38.462 8.23 0.00 41.86 4.58
133 135 9.342308 TCATGCTAATTCCTCTTAATAAGGTTG 57.658 33.333 0.00 0.00 35.29 3.77
219 222 9.458727 CTGGCCATATAGAATGAGTCAATTTAT 57.541 33.333 5.51 0.00 0.00 1.40
231 234 5.848286 TTGGATGACTGGCCATATAGAAT 57.152 39.130 5.51 0.00 33.46 2.40
262 265 5.254115 ACACTTTAAGGAAGATACAAGCCC 58.746 41.667 0.00 0.00 38.77 5.19
300 303 5.130975 TGATCAATCCCATGTAGCTAGTTGT 59.869 40.000 0.00 0.00 0.00 3.32
306 309 4.080129 ACTTGTGATCAATCCCATGTAGCT 60.080 41.667 0.00 0.00 32.82 3.32
348 352 3.989698 ATCACGACAAGCGCTCCCG 62.990 63.158 12.06 17.10 46.04 5.14
448 453 4.668636 AGGACCATAAACGAAAAATCCCA 58.331 39.130 0.00 0.00 0.00 4.37
487 492 6.040878 CACTTCCGTAAATAGGTCTCGATTT 58.959 40.000 0.00 0.00 33.77 2.17
550 557 0.107703 ATCATGCTACCACCCACGTG 60.108 55.000 9.08 9.08 39.91 4.49
579 586 0.251165 GCCTAAACTGAAGGTGGCCA 60.251 55.000 0.00 0.00 36.43 5.36
696 761 1.276622 ATCCTCACGCTAGGGTTGTT 58.723 50.000 10.17 0.00 37.24 2.83
765 1789 3.453717 CCATGAGGTTGAGATTGAGAGGA 59.546 47.826 0.00 0.00 0.00 3.71
864 1888 1.961277 GCCGGTGGAGAAGTGTGTG 60.961 63.158 1.90 0.00 0.00 3.82
865 1889 2.426023 GCCGGTGGAGAAGTGTGT 59.574 61.111 1.90 0.00 0.00 3.72
974 1998 3.492102 TTGCTTCTTACTCTGGTGCTT 57.508 42.857 0.00 0.00 0.00 3.91
1022 2046 0.818040 AGCAGGGTTTGTGTTCGTCC 60.818 55.000 0.00 0.00 0.00 4.79
1066 2090 2.379459 GGAGGGGAAGAGGAAGGGC 61.379 68.421 0.00 0.00 0.00 5.19
1241 2265 5.767168 AGCTACAGAAATCAAAGAAGCAAGT 59.233 36.000 0.00 0.00 0.00 3.16
1468 2492 4.530710 TCAAGTAGGTTAAGCACACGAT 57.469 40.909 7.52 0.00 0.00 3.73
1476 2500 4.412207 GCCGCAATTTCAAGTAGGTTAAG 58.588 43.478 0.00 0.00 0.00 1.85
1918 2942 0.821517 TACCCCGTACACTGCAGATG 59.178 55.000 23.35 16.93 0.00 2.90
2015 3039 5.839262 TTTAGCTATGTGAACTGAACACG 57.161 39.130 0.00 0.00 40.61 4.49
2283 3309 2.676463 CGCCATAAAAACATTGGTGGGG 60.676 50.000 0.00 0.00 37.38 4.96
2284 3310 2.028567 ACGCCATAAAAACATTGGTGGG 60.029 45.455 6.68 0.00 43.69 4.61
2285 3311 3.311486 ACGCCATAAAAACATTGGTGG 57.689 42.857 6.68 0.00 43.69 4.61
2308 3334 1.062258 GTCGGTCGTCATAAAACGCA 58.938 50.000 0.00 0.00 42.31 5.24
2311 3337 1.362768 GGGGTCGGTCGTCATAAAAC 58.637 55.000 0.00 0.00 0.00 2.43
2319 3345 0.615544 TTATGAAGGGGGTCGGTCGT 60.616 55.000 0.00 0.00 0.00 4.34
2363 3389 1.548269 TGTGTCTATGATGTCGCCACA 59.452 47.619 0.00 0.00 36.78 4.17
2463 3496 3.221771 TGTACAGCTCATTTGGTGCTTT 58.778 40.909 0.00 0.00 43.47 3.51
2529 3562 0.686789 ACATGTACTGCCTGACTGCA 59.313 50.000 0.00 0.00 39.37 4.41
2547 4407 9.245962 GTATGTTTCTATGTACCTGTGATGTAC 57.754 37.037 0.00 0.00 39.19 2.90
2694 6931 2.194326 GCTCTTCCTCCCCATGCC 59.806 66.667 0.00 0.00 0.00 4.40
2752 6990 2.274437 CGTTCATCAGGTGACCATCAG 58.726 52.381 3.63 0.00 36.32 2.90
2837 7075 3.407967 CCTTCCGCCAGCCCCTTA 61.408 66.667 0.00 0.00 0.00 2.69
2868 7298 1.081092 CTCTTCCCTCCTCCCACCA 59.919 63.158 0.00 0.00 0.00 4.17
2869 7299 1.690985 CCTCTTCCCTCCTCCCACC 60.691 68.421 0.00 0.00 0.00 4.61
2870 7300 1.690985 CCCTCTTCCCTCCTCCCAC 60.691 68.421 0.00 0.00 0.00 4.61
2871 7301 1.460839 TTCCCTCTTCCCTCCTCCCA 61.461 60.000 0.00 0.00 0.00 4.37
2872 7302 0.692756 CTTCCCTCTTCCCTCCTCCC 60.693 65.000 0.00 0.00 0.00 4.30
2873 7303 0.340208 TCTTCCCTCTTCCCTCCTCC 59.660 60.000 0.00 0.00 0.00 4.30
2874 7304 1.691163 CCTCTTCCCTCTTCCCTCCTC 60.691 61.905 0.00 0.00 0.00 3.71
2875 7305 0.341609 CCTCTTCCCTCTTCCCTCCT 59.658 60.000 0.00 0.00 0.00 3.69
2876 7306 0.692756 CCCTCTTCCCTCTTCCCTCC 60.693 65.000 0.00 0.00 0.00 4.30
2877 7307 0.692756 CCCCTCTTCCCTCTTCCCTC 60.693 65.000 0.00 0.00 0.00 4.30
2878 7308 1.398234 CCCCTCTTCCCTCTTCCCT 59.602 63.158 0.00 0.00 0.00 4.20
2879 7309 1.694525 CCCCCTCTTCCCTCTTCCC 60.695 68.421 0.00 0.00 0.00 3.97
2880 7310 1.083141 ACCCCCTCTTCCCTCTTCC 59.917 63.158 0.00 0.00 0.00 3.46
2881 7311 1.275421 CCACCCCCTCTTCCCTCTTC 61.275 65.000 0.00 0.00 0.00 2.87
2882 7312 1.229984 CCACCCCCTCTTCCCTCTT 60.230 63.158 0.00 0.00 0.00 2.85
2883 7313 2.456840 CCACCCCCTCTTCCCTCT 59.543 66.667 0.00 0.00 0.00 3.69
2884 7314 3.412408 GCCACCCCCTCTTCCCTC 61.412 72.222 0.00 0.00 0.00 4.30
2905 8102 1.378514 GCGAGCCATTTTCCCTCCA 60.379 57.895 0.00 0.00 0.00 3.86
2912 8117 2.036256 AGCCCTGCGAGCCATTTT 59.964 55.556 0.00 0.00 0.00 1.82
2928 8133 3.721706 GCACCACCTCCCCTCCAG 61.722 72.222 0.00 0.00 0.00 3.86
3042 8776 2.003658 GACTCCAGAGGCAGAGCGAG 62.004 65.000 0.00 0.00 36.17 5.03
3043 8777 2.036414 ACTCCAGAGGCAGAGCGA 59.964 61.111 0.00 0.00 33.18 4.93
3044 8778 2.051518 AGACTCCAGAGGCAGAGCG 61.052 63.158 2.78 0.00 39.50 5.03
3045 8779 1.516892 CAGACTCCAGAGGCAGAGC 59.483 63.158 2.78 0.00 39.50 4.09
3071 8825 2.671619 CAGCGGCGGGAAGGAAAA 60.672 61.111 9.78 0.00 0.00 2.29
3247 9023 1.151777 CTCGCGATATGTTTGGCCGT 61.152 55.000 10.36 0.00 0.00 5.68
3328 9104 1.544691 ACAGTGTTCTTATCGCGTCCT 59.455 47.619 5.77 0.00 0.00 3.85
3335 9111 4.015872 TGTGGGGAACAGTGTTCTTATC 57.984 45.455 29.89 19.60 33.78 1.75
3338 9114 2.174639 TGATGTGGGGAACAGTGTTCTT 59.825 45.455 29.89 12.12 43.64 2.52
3340 9116 2.270352 TGATGTGGGGAACAGTGTTC 57.730 50.000 25.00 25.00 43.64 3.18
3345 9121 3.016736 GTGGTTATGATGTGGGGAACAG 58.983 50.000 0.00 0.00 43.64 3.16
3680 9456 9.310716 GGCTTCGTAAGTAAGTAAGTAATTCAT 57.689 33.333 0.00 0.00 39.48 2.57
3681 9457 8.526147 AGGCTTCGTAAGTAAGTAAGTAATTCA 58.474 33.333 0.00 0.00 39.48 2.57
3682 9458 8.923609 AGGCTTCGTAAGTAAGTAAGTAATTC 57.076 34.615 0.00 0.00 39.48 2.17
3683 9459 9.716531 AAAGGCTTCGTAAGTAAGTAAGTAATT 57.283 29.630 0.00 0.00 39.48 1.40
3684 9460 9.716531 AAAAGGCTTCGTAAGTAAGTAAGTAAT 57.283 29.630 0.00 0.00 39.48 1.89
3687 9463 9.363763 GATAAAAGGCTTCGTAAGTAAGTAAGT 57.636 33.333 0.00 0.00 39.48 2.24
3688 9464 8.815189 GGATAAAAGGCTTCGTAAGTAAGTAAG 58.185 37.037 0.00 0.00 39.48 2.34
3689 9465 7.765819 GGGATAAAAGGCTTCGTAAGTAAGTAA 59.234 37.037 0.00 0.00 39.48 2.24
3690 9466 7.093377 TGGGATAAAAGGCTTCGTAAGTAAGTA 60.093 37.037 0.00 0.00 39.48 2.24
3691 9467 6.111382 GGGATAAAAGGCTTCGTAAGTAAGT 58.889 40.000 0.00 0.00 39.48 2.24
3692 9468 6.110707 TGGGATAAAAGGCTTCGTAAGTAAG 58.889 40.000 0.00 0.00 39.48 2.34
3693 9469 6.052405 TGGGATAAAAGGCTTCGTAAGTAA 57.948 37.500 0.00 0.00 39.48 2.24
3694 9470 5.680594 TGGGATAAAAGGCTTCGTAAGTA 57.319 39.130 0.00 0.00 39.48 2.24
3695 9471 4.563140 TGGGATAAAAGGCTTCGTAAGT 57.437 40.909 0.00 0.00 39.48 2.24
3696 9472 5.182380 TGTTTGGGATAAAAGGCTTCGTAAG 59.818 40.000 0.00 0.00 0.00 2.34
3697 9473 5.071370 TGTTTGGGATAAAAGGCTTCGTAA 58.929 37.500 0.00 0.00 0.00 3.18
3698 9474 4.653868 TGTTTGGGATAAAAGGCTTCGTA 58.346 39.130 0.00 0.00 0.00 3.43
3699 9475 3.492337 TGTTTGGGATAAAAGGCTTCGT 58.508 40.909 0.00 0.00 0.00 3.85
3700 9476 4.022329 ACTTGTTTGGGATAAAAGGCTTCG 60.022 41.667 0.00 0.00 0.00 3.79
3701 9477 5.468540 ACTTGTTTGGGATAAAAGGCTTC 57.531 39.130 0.00 0.00 0.00 3.86
3702 9478 5.610398 CAACTTGTTTGGGATAAAAGGCTT 58.390 37.500 0.00 0.00 0.00 4.35
3703 9479 5.213891 CAACTTGTTTGGGATAAAAGGCT 57.786 39.130 0.00 0.00 0.00 4.58
3715 9491 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
3716 9492 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
3717 9493 2.627933 TCTAGCCTACCCCAACTTGTT 58.372 47.619 0.00 0.00 0.00 2.83
3718 9494 2.337359 TCTAGCCTACCCCAACTTGT 57.663 50.000 0.00 0.00 0.00 3.16
3719 9495 4.593206 TCATATCTAGCCTACCCCAACTTG 59.407 45.833 0.00 0.00 0.00 3.16
3720 9496 4.827789 TCATATCTAGCCTACCCCAACTT 58.172 43.478 0.00 0.00 0.00 2.66
3721 9497 4.487282 TCATATCTAGCCTACCCCAACT 57.513 45.455 0.00 0.00 0.00 3.16
3722 9498 5.306394 GTTTCATATCTAGCCTACCCCAAC 58.694 45.833 0.00 0.00 0.00 3.77
3723 9499 4.349930 GGTTTCATATCTAGCCTACCCCAA 59.650 45.833 0.00 0.00 0.00 4.12
3724 9500 3.908103 GGTTTCATATCTAGCCTACCCCA 59.092 47.826 0.00 0.00 0.00 4.96
3725 9501 3.263681 GGGTTTCATATCTAGCCTACCCC 59.736 52.174 0.00 0.00 38.39 4.95
3726 9502 4.168883 AGGGTTTCATATCTAGCCTACCC 58.831 47.826 0.00 0.00 43.42 3.69
3727 9503 5.827326 AAGGGTTTCATATCTAGCCTACC 57.173 43.478 0.00 0.00 38.75 3.18
3728 9504 6.827727 TGAAAGGGTTTCATATCTAGCCTAC 58.172 40.000 0.00 0.00 44.21 3.18
3730 9506 5.975988 TGAAAGGGTTTCATATCTAGCCT 57.024 39.130 0.00 0.00 44.21 4.58
3740 9516 1.766496 AGTCCTCGTGAAAGGGTTTCA 59.234 47.619 0.00 0.00 46.68 2.69
3741 9517 2.545537 AGTCCTCGTGAAAGGGTTTC 57.454 50.000 0.00 0.00 40.08 2.78
3742 9518 2.486727 GGAAGTCCTCGTGAAAGGGTTT 60.487 50.000 0.00 0.00 37.02 3.27
3743 9519 1.071857 GGAAGTCCTCGTGAAAGGGTT 59.928 52.381 0.00 0.00 37.02 4.11
3744 9520 0.685660 GGAAGTCCTCGTGAAAGGGT 59.314 55.000 0.00 0.00 37.02 4.34
3745 9521 0.036294 GGGAAGTCCTCGTGAAAGGG 60.036 60.000 0.00 0.00 37.02 3.95
3746 9522 0.685097 TGGGAAGTCCTCGTGAAAGG 59.315 55.000 0.00 0.00 37.81 3.11
3747 9523 1.338200 CCTGGGAAGTCCTCGTGAAAG 60.338 57.143 0.00 0.00 36.20 2.62
3748 9524 0.685097 CCTGGGAAGTCCTCGTGAAA 59.315 55.000 0.00 0.00 36.20 2.69
3749 9525 0.178944 TCCTGGGAAGTCCTCGTGAA 60.179 55.000 0.00 0.00 36.20 3.18
3750 9526 0.612174 CTCCTGGGAAGTCCTCGTGA 60.612 60.000 0.00 0.00 36.20 4.35
3751 9527 1.608717 CCTCCTGGGAAGTCCTCGTG 61.609 65.000 0.00 0.00 37.23 4.35
3752 9528 1.305381 CCTCCTGGGAAGTCCTCGT 60.305 63.158 0.00 0.00 37.23 4.18
3753 9529 1.305381 ACCTCCTGGGAAGTCCTCG 60.305 63.158 0.00 0.00 38.76 4.63
3754 9530 0.252284 TGACCTCCTGGGAAGTCCTC 60.252 60.000 13.79 0.00 35.38 3.71
3755 9531 0.545548 GTGACCTCCTGGGAAGTCCT 60.546 60.000 13.79 0.00 35.38 3.85
3756 9532 1.554583 GGTGACCTCCTGGGAAGTCC 61.555 65.000 13.79 6.97 35.38 3.85
3757 9533 1.984020 GGTGACCTCCTGGGAAGTC 59.016 63.158 10.52 10.52 36.44 3.01
3758 9534 4.234673 GGTGACCTCCTGGGAAGT 57.765 61.111 0.00 0.00 38.76 3.01
3770 9546 5.051409 AGAGTAGTACTAGGATGGGTGAC 57.949 47.826 1.87 0.00 0.00 3.67
3771 9547 4.202336 CGAGAGTAGTACTAGGATGGGTGA 60.202 50.000 1.87 0.00 0.00 4.02
3772 9548 4.066490 CGAGAGTAGTACTAGGATGGGTG 58.934 52.174 1.87 0.00 0.00 4.61
3773 9549 3.496515 GCGAGAGTAGTACTAGGATGGGT 60.497 52.174 1.87 0.00 0.00 4.51
3774 9550 3.075884 GCGAGAGTAGTACTAGGATGGG 58.924 54.545 1.87 0.00 0.00 4.00
3775 9551 3.075884 GGCGAGAGTAGTACTAGGATGG 58.924 54.545 1.87 0.00 0.00 3.51
3776 9552 3.075884 GGGCGAGAGTAGTACTAGGATG 58.924 54.545 1.87 0.00 0.00 3.51
3777 9553 2.709934 TGGGCGAGAGTAGTACTAGGAT 59.290 50.000 1.87 0.00 0.00 3.24
3778 9554 2.121948 TGGGCGAGAGTAGTACTAGGA 58.878 52.381 1.87 0.00 0.00 2.94
3779 9555 2.634815 TGGGCGAGAGTAGTACTAGG 57.365 55.000 1.87 0.00 0.00 3.02
3780 9556 4.261656 CCATTTGGGCGAGAGTAGTACTAG 60.262 50.000 1.87 0.00 0.00 2.57
3781 9557 3.635373 CCATTTGGGCGAGAGTAGTACTA 59.365 47.826 1.88 0.00 0.00 1.82
3782 9558 2.431057 CCATTTGGGCGAGAGTAGTACT 59.569 50.000 1.37 1.37 0.00 2.73
3783 9559 2.822764 CCATTTGGGCGAGAGTAGTAC 58.177 52.381 0.00 0.00 0.00 2.73
3803 9579 5.294122 AGCCAGTCTTTTGGGTATGAAACC 61.294 45.833 0.00 0.00 46.57 3.27
3804 9580 3.826729 AGCCAGTCTTTTGGGTATGAAAC 59.173 43.478 0.00 0.00 46.57 2.78
3805 9581 4.112634 AGCCAGTCTTTTGGGTATGAAA 57.887 40.909 0.00 0.00 46.57 2.69
3806 9582 3.806949 AGCCAGTCTTTTGGGTATGAA 57.193 42.857 0.00 0.00 46.57 2.57
3807 9583 3.844211 ACTAGCCAGTCTTTTGGGTATGA 59.156 43.478 4.61 0.00 46.74 2.15
3808 9584 4.222124 ACTAGCCAGTCTTTTGGGTATG 57.778 45.455 4.61 2.96 46.74 2.39
3809 9585 4.929146 AACTAGCCAGTCTTTTGGGTAT 57.071 40.909 4.61 0.00 46.74 2.73
3810 9586 4.717279 AAACTAGCCAGTCTTTTGGGTA 57.283 40.909 4.17 4.17 46.57 3.69
3812 9588 4.937201 AAAAACTAGCCAGTCTTTTGGG 57.063 40.909 0.00 0.00 38.72 4.12
3813 9589 5.008316 ACGTAAAAACTAGCCAGTCTTTTGG 59.992 40.000 12.02 8.37 41.35 3.28
3814 9590 6.056428 ACGTAAAAACTAGCCAGTCTTTTG 57.944 37.500 12.02 0.82 32.29 2.44
3815 9591 6.459161 CCAACGTAAAAACTAGCCAGTCTTTT 60.459 38.462 0.00 0.85 32.29 2.27
3816 9592 5.008316 CCAACGTAAAAACTAGCCAGTCTTT 59.992 40.000 0.00 0.00 32.29 2.52
3817 9593 4.514066 CCAACGTAAAAACTAGCCAGTCTT 59.486 41.667 0.00 0.00 32.29 3.01
3818 9594 4.062991 CCAACGTAAAAACTAGCCAGTCT 58.937 43.478 0.00 0.00 32.29 3.24
3819 9595 3.364664 GCCAACGTAAAAACTAGCCAGTC 60.365 47.826 0.00 0.00 32.29 3.51
3820 9596 2.551032 GCCAACGTAAAAACTAGCCAGT 59.449 45.455 0.00 0.00 36.19 4.00
3821 9597 2.812011 AGCCAACGTAAAAACTAGCCAG 59.188 45.455 0.00 0.00 0.00 4.85
3822 9598 2.809696 GAGCCAACGTAAAAACTAGCCA 59.190 45.455 0.00 0.00 0.00 4.75
3823 9599 2.159747 CGAGCCAACGTAAAAACTAGCC 60.160 50.000 0.00 0.00 0.00 3.93
3824 9600 2.723923 GCGAGCCAACGTAAAAACTAGC 60.724 50.000 0.00 0.00 35.59 3.42
3825 9601 2.159747 GGCGAGCCAACGTAAAAACTAG 60.160 50.000 9.58 0.00 35.81 2.57
3826 9602 1.799994 GGCGAGCCAACGTAAAAACTA 59.200 47.619 9.58 0.00 35.81 2.24
3827 9603 0.589708 GGCGAGCCAACGTAAAAACT 59.410 50.000 9.58 0.00 35.81 2.66
3828 9604 0.308376 TGGCGAGCCAACGTAAAAAC 59.692 50.000 15.24 0.00 44.12 2.43
3829 9605 2.704108 TGGCGAGCCAACGTAAAAA 58.296 47.368 15.24 0.00 44.12 1.94
3830 9606 4.458666 TGGCGAGCCAACGTAAAA 57.541 50.000 15.24 0.00 44.12 1.52
3841 9617 1.009829 GTTGTGATAGGCTTGGCGAG 58.990 55.000 0.00 0.00 0.00 5.03
3842 9618 0.392461 GGTTGTGATAGGCTTGGCGA 60.392 55.000 0.00 0.00 0.00 5.54
3843 9619 1.376609 GGGTTGTGATAGGCTTGGCG 61.377 60.000 0.00 0.00 0.00 5.69
3844 9620 0.034089 AGGGTTGTGATAGGCTTGGC 60.034 55.000 0.00 0.00 0.00 4.52
3845 9621 2.514458 AAGGGTTGTGATAGGCTTGG 57.486 50.000 0.00 0.00 0.00 3.61
3846 9622 7.823745 ATATTTAAGGGTTGTGATAGGCTTG 57.176 36.000 0.00 0.00 0.00 4.01
4179 9955 3.806380 AGCCGAGTCGAGAAGAGTATAA 58.194 45.455 15.64 0.00 31.40 0.98
4336 10112 6.496338 AATCCAAGACAAGTAATTCGGAAC 57.504 37.500 0.00 0.00 0.00 3.62
4337 10113 6.488683 ACAAATCCAAGACAAGTAATTCGGAA 59.511 34.615 0.00 0.00 0.00 4.30
4338 10114 6.001460 ACAAATCCAAGACAAGTAATTCGGA 58.999 36.000 0.00 0.00 0.00 4.55
4339 10115 6.149474 AGACAAATCCAAGACAAGTAATTCGG 59.851 38.462 0.00 0.00 0.00 4.30
4340 10116 7.133891 AGACAAATCCAAGACAAGTAATTCG 57.866 36.000 0.00 0.00 0.00 3.34
4341 10117 9.436957 TCTAGACAAATCCAAGACAAGTAATTC 57.563 33.333 0.00 0.00 0.00 2.17
4342 10118 9.965902 ATCTAGACAAATCCAAGACAAGTAATT 57.034 29.630 0.00 0.00 0.00 1.40
4344 10120 9.871238 GTATCTAGACAAATCCAAGACAAGTAA 57.129 33.333 0.00 0.00 0.00 2.24
4345 10121 8.188799 CGTATCTAGACAAATCCAAGACAAGTA 58.811 37.037 0.00 0.00 0.00 2.24
4346 10122 7.036220 CGTATCTAGACAAATCCAAGACAAGT 58.964 38.462 0.00 0.00 0.00 3.16
4347 10123 6.477033 CCGTATCTAGACAAATCCAAGACAAG 59.523 42.308 0.00 0.00 0.00 3.16
4348 10124 6.153851 TCCGTATCTAGACAAATCCAAGACAA 59.846 38.462 0.00 0.00 0.00 3.18
4349 10125 5.655090 TCCGTATCTAGACAAATCCAAGACA 59.345 40.000 0.00 0.00 0.00 3.41
4350 10126 6.145338 TCCGTATCTAGACAAATCCAAGAC 57.855 41.667 0.00 0.00 0.00 3.01
4351 10127 6.323996 ACATCCGTATCTAGACAAATCCAAGA 59.676 38.462 0.00 0.00 0.00 3.02
4352 10128 6.516718 ACATCCGTATCTAGACAAATCCAAG 58.483 40.000 0.00 0.00 0.00 3.61
4353 10129 6.479972 ACATCCGTATCTAGACAAATCCAA 57.520 37.500 0.00 0.00 0.00 3.53
4354 10130 7.776618 ATACATCCGTATCTAGACAAATCCA 57.223 36.000 0.00 0.00 32.66 3.41
4368 10144 9.570468 ACTAAAATGAGTCTAGATACATCCGTA 57.430 33.333 12.66 6.93 0.00 4.02
4369 10145 8.353684 CACTAAAATGAGTCTAGATACATCCGT 58.646 37.037 12.66 7.10 0.00 4.69
4370 10146 7.327275 GCACTAAAATGAGTCTAGATACATCCG 59.673 40.741 12.66 6.68 0.00 4.18
4371 10147 8.364142 AGCACTAAAATGAGTCTAGATACATCC 58.636 37.037 12.66 0.00 0.00 3.51
4374 10150 9.628500 TCTAGCACTAAAATGAGTCTAGATACA 57.372 33.333 0.00 0.00 34.65 2.29
4378 10154 9.069082 GGTATCTAGCACTAAAATGAGTCTAGA 57.931 37.037 11.59 11.59 38.76 2.43
4379 10155 9.073475 AGGTATCTAGCACTAAAATGAGTCTAG 57.927 37.037 0.00 0.00 33.29 2.43
4380 10156 8.998277 AGGTATCTAGCACTAAAATGAGTCTA 57.002 34.615 0.00 0.00 0.00 2.59
4381 10157 7.014808 GGAGGTATCTAGCACTAAAATGAGTCT 59.985 40.741 0.00 0.00 0.00 3.24
4382 10158 7.149307 GGAGGTATCTAGCACTAAAATGAGTC 58.851 42.308 0.00 0.00 0.00 3.36
4383 10159 6.239064 CGGAGGTATCTAGCACTAAAATGAGT 60.239 42.308 0.00 0.00 0.00 3.41
4384 10160 6.153067 CGGAGGTATCTAGCACTAAAATGAG 58.847 44.000 0.00 0.00 0.00 2.90
4385 10161 5.597182 ACGGAGGTATCTAGCACTAAAATGA 59.403 40.000 0.00 0.00 0.00 2.57
4386 10162 5.844004 ACGGAGGTATCTAGCACTAAAATG 58.156 41.667 0.00 0.00 0.00 2.32
4387 10163 7.778185 ATACGGAGGTATCTAGCACTAAAAT 57.222 36.000 0.00 0.00 34.18 1.82
4400 10176 9.233649 CTTAGATTTGTCTAGATACGGAGGTAT 57.766 37.037 0.00 0.00 42.01 2.73
4401 10177 8.435187 TCTTAGATTTGTCTAGATACGGAGGTA 58.565 37.037 0.00 0.00 0.00 3.08
4402 10178 7.229106 GTCTTAGATTTGTCTAGATACGGAGGT 59.771 40.741 0.00 0.00 0.00 3.85
4403 10179 7.228906 TGTCTTAGATTTGTCTAGATACGGAGG 59.771 40.741 0.00 0.00 0.00 4.30
4404 10180 8.155821 TGTCTTAGATTTGTCTAGATACGGAG 57.844 38.462 0.00 0.00 0.00 4.63
4405 10181 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
4406 10182 8.407064 ACTTGTCTTAGATTTGTCTAGATACGG 58.593 37.037 0.00 0.00 0.00 4.02
4414 10190 9.793259 TCCAAATTACTTGTCTTAGATTTGTCT 57.207 29.630 0.00 0.00 34.40 3.41
4417 10193 9.329913 CGTTCCAAATTACTTGTCTTAGATTTG 57.670 33.333 0.00 0.00 35.40 2.32
4418 10194 8.512138 CCGTTCCAAATTACTTGTCTTAGATTT 58.488 33.333 0.00 0.00 32.65 2.17
4419 10195 7.881232 TCCGTTCCAAATTACTTGTCTTAGATT 59.119 33.333 0.00 0.00 32.65 2.40
4420 10196 7.391620 TCCGTTCCAAATTACTTGTCTTAGAT 58.608 34.615 0.00 0.00 32.65 1.98
4421 10197 6.761312 TCCGTTCCAAATTACTTGTCTTAGA 58.239 36.000 0.00 0.00 32.65 2.10
4422 10198 6.092259 CCTCCGTTCCAAATTACTTGTCTTAG 59.908 42.308 0.00 0.00 32.65 2.18
4423 10199 5.935789 CCTCCGTTCCAAATTACTTGTCTTA 59.064 40.000 0.00 0.00 32.65 2.10
4424 10200 4.760204 CCTCCGTTCCAAATTACTTGTCTT 59.240 41.667 0.00 0.00 32.65 3.01
4425 10201 4.324267 CCTCCGTTCCAAATTACTTGTCT 58.676 43.478 0.00 0.00 32.65 3.41
4426 10202 3.439129 CCCTCCGTTCCAAATTACTTGTC 59.561 47.826 0.00 0.00 32.65 3.18
4427 10203 3.073356 TCCCTCCGTTCCAAATTACTTGT 59.927 43.478 0.00 0.00 32.65 3.16
4428 10204 3.681593 TCCCTCCGTTCCAAATTACTTG 58.318 45.455 0.00 0.00 34.52 3.16
4429 10205 3.329814 ACTCCCTCCGTTCCAAATTACTT 59.670 43.478 0.00 0.00 0.00 2.24
4430 10206 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
4431 10207 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
4432 10208 4.966805 AGATACTCCCTCCGTTCCAAATTA 59.033 41.667 0.00 0.00 0.00 1.40
4433 10209 3.780850 AGATACTCCCTCCGTTCCAAATT 59.219 43.478 0.00 0.00 0.00 1.82
4434 10210 3.134804 CAGATACTCCCTCCGTTCCAAAT 59.865 47.826 0.00 0.00 0.00 2.32
4435 10211 2.500098 CAGATACTCCCTCCGTTCCAAA 59.500 50.000 0.00 0.00 0.00 3.28
4436 10212 2.108168 CAGATACTCCCTCCGTTCCAA 58.892 52.381 0.00 0.00 0.00 3.53
4437 10213 1.006758 ACAGATACTCCCTCCGTTCCA 59.993 52.381 0.00 0.00 0.00 3.53
4438 10214 1.777941 ACAGATACTCCCTCCGTTCC 58.222 55.000 0.00 0.00 0.00 3.62
4439 10215 5.048154 GGTTATACAGATACTCCCTCCGTTC 60.048 48.000 0.00 0.00 0.00 3.95
4440 10216 4.831710 GGTTATACAGATACTCCCTCCGTT 59.168 45.833 0.00 0.00 0.00 4.44
4441 10217 4.106019 AGGTTATACAGATACTCCCTCCGT 59.894 45.833 0.00 0.00 0.00 4.69
4442 10218 4.459685 CAGGTTATACAGATACTCCCTCCG 59.540 50.000 0.00 0.00 0.00 4.63
4443 10219 4.773149 CCAGGTTATACAGATACTCCCTCC 59.227 50.000 0.00 0.00 0.00 4.30
4444 10220 4.773149 CCCAGGTTATACAGATACTCCCTC 59.227 50.000 0.00 0.00 0.00 4.30
4445 10221 4.172241 ACCCAGGTTATACAGATACTCCCT 59.828 45.833 0.00 0.00 0.00 4.20
4446 10222 4.490706 ACCCAGGTTATACAGATACTCCC 58.509 47.826 0.00 0.00 0.00 4.30
4447 10223 5.601313 TGAACCCAGGTTATACAGATACTCC 59.399 44.000 1.09 0.00 38.60 3.85
4448 10224 6.726490 TGAACCCAGGTTATACAGATACTC 57.274 41.667 1.09 0.00 38.60 2.59
4449 10225 5.070580 GCTGAACCCAGGTTATACAGATACT 59.929 44.000 16.78 0.00 40.72 2.12
4450 10226 5.298347 GCTGAACCCAGGTTATACAGATAC 58.702 45.833 16.78 1.10 40.72 2.24
4451 10227 4.347000 GGCTGAACCCAGGTTATACAGATA 59.653 45.833 16.78 0.00 40.72 1.98
5197 11017 6.667414 ACTATCCATTTGGGCACTTCAATTAA 59.333 34.615 0.00 0.00 36.21 1.40
5304 11134 9.736023 GTTATATGCCTTCCACTTTCAAAATAG 57.264 33.333 0.00 0.00 0.00 1.73
5392 11222 1.210478 AGGTGGCAGTAGTTAGGCATG 59.790 52.381 0.00 0.00 42.48 4.06
5513 11343 3.443145 TTCGATATCCTCCTCCTCCTC 57.557 52.381 0.00 0.00 0.00 3.71
5514 11344 4.349365 GAATTCGATATCCTCCTCCTCCT 58.651 47.826 0.00 0.00 0.00 3.69
5515 11345 3.129638 CGAATTCGATATCCTCCTCCTCC 59.870 52.174 23.29 0.00 43.02 4.30
5516 11346 4.011023 TCGAATTCGATATCCTCCTCCTC 58.989 47.826 25.96 0.00 44.22 3.71
5517 11347 4.035612 TCGAATTCGATATCCTCCTCCT 57.964 45.455 25.96 0.00 44.22 3.69
5625 11458 1.142748 CTCCTCGTCATCTGCACCC 59.857 63.158 0.00 0.00 0.00 4.61
5960 11793 2.095314 TGCAAAGCATACATGTTCACCG 60.095 45.455 2.30 0.00 31.71 4.94
6083 11916 1.935933 AGCGTTCACGTCAAGAAACT 58.064 45.000 0.62 0.00 42.22 2.66
6120 11967 2.543861 CCCCGACTCAAGTCATATCGTG 60.544 54.545 10.56 0.00 44.99 4.35
6128 11975 2.076863 CATCAAACCCCGACTCAAGTC 58.923 52.381 0.00 0.00 41.47 3.01
6213 12078 5.116882 ACAATTCCTCATAGTAAGCGGAAC 58.883 41.667 0.00 0.00 36.66 3.62
6214 12079 5.353394 ACAATTCCTCATAGTAAGCGGAA 57.647 39.130 0.00 0.00 38.06 4.30
6251 12116 7.775093 TCATATATGAACAGCCTTTTGCTAGTT 59.225 33.333 13.12 0.00 40.52 2.24
6252 12117 7.282585 TCATATATGAACAGCCTTTTGCTAGT 58.717 34.615 13.12 0.00 40.52 2.57
6253 12118 7.734924 TCATATATGAACAGCCTTTTGCTAG 57.265 36.000 13.12 0.00 40.52 3.42
6254 12119 9.219603 GTATCATATATGAACAGCCTTTTGCTA 57.780 33.333 19.03 0.26 44.41 3.49
6255 12120 7.720957 TGTATCATATATGAACAGCCTTTTGCT 59.279 33.333 19.03 1.18 46.08 3.91
6256 12121 7.874940 TGTATCATATATGAACAGCCTTTTGC 58.125 34.615 19.03 4.27 40.69 3.68
6259 12124 9.632638 AGTTTGTATCATATATGAACAGCCTTT 57.367 29.630 19.03 3.25 40.69 3.11
6261 12126 9.935241 CTAGTTTGTATCATATATGAACAGCCT 57.065 33.333 19.03 19.67 40.69 4.58
6262 12127 8.660373 GCTAGTTTGTATCATATATGAACAGCC 58.340 37.037 19.03 15.42 40.69 4.85
6263 12128 9.208022 TGCTAGTTTGTATCATATATGAACAGC 57.792 33.333 19.03 19.13 40.69 4.40
6269 12134 9.831737 GCCTTTTGCTAGTTTGTATCATATATG 57.168 33.333 6.36 6.36 36.87 1.78
6270 12135 9.014297 GGCCTTTTGCTAGTTTGTATCATATAT 57.986 33.333 0.00 0.00 40.92 0.86
6271 12136 8.217799 AGGCCTTTTGCTAGTTTGTATCATATA 58.782 33.333 0.00 0.00 40.92 0.86
6272 12137 7.013655 CAGGCCTTTTGCTAGTTTGTATCATAT 59.986 37.037 0.00 0.00 40.92 1.78
6273 12138 6.318648 CAGGCCTTTTGCTAGTTTGTATCATA 59.681 38.462 0.00 0.00 40.92 2.15
6274 12139 5.126061 CAGGCCTTTTGCTAGTTTGTATCAT 59.874 40.000 0.00 0.00 40.92 2.45
6275 12140 4.458989 CAGGCCTTTTGCTAGTTTGTATCA 59.541 41.667 0.00 0.00 40.92 2.15
6276 12141 4.459337 ACAGGCCTTTTGCTAGTTTGTATC 59.541 41.667 0.00 0.00 40.92 2.24
6277 12142 4.407365 ACAGGCCTTTTGCTAGTTTGTAT 58.593 39.130 0.00 0.00 40.92 2.29
6278 12143 3.818773 GACAGGCCTTTTGCTAGTTTGTA 59.181 43.478 0.00 0.00 40.92 2.41
6279 12144 2.623416 GACAGGCCTTTTGCTAGTTTGT 59.377 45.455 0.00 0.00 40.92 2.83
6575 12441 3.118920 TCCATTCTAGAAATGTTCGCCGA 60.119 43.478 9.71 0.00 34.02 5.54
6579 12445 5.347635 TGTTCGTCCATTCTAGAAATGTTCG 59.652 40.000 9.71 10.80 34.02 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.