Multiple sequence alignment - TraesCS3A01G201000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G201000 chr3A 100.000 8692 0 0 1 8692 334174703 334183394 0.000000e+00 16052.0
1 TraesCS3A01G201000 chr3A 96.789 218 7 0 8248 8465 334189889 334190106 1.780000e-96 364.0
2 TraesCS3A01G201000 chr3B 95.347 5136 155 34 1 5118 314349546 314354615 0.000000e+00 8083.0
3 TraesCS3A01G201000 chr3B 95.706 2911 62 26 5279 8180 314354613 314357469 0.000000e+00 4625.0
4 TraesCS3A01G201000 chr3B 90.746 389 22 6 8306 8690 197789168 197788790 2.800000e-139 507.0
5 TraesCS3A01G201000 chr3B 97.191 178 4 1 5106 5283 571752699 571752523 5.100000e-77 300.0
6 TraesCS3A01G201000 chr3B 89.062 64 6 1 1 63 31999276 31999213 2.600000e-10 78.7
7 TraesCS3A01G201000 chr3D 96.691 3566 79 17 1356 4916 250048056 250044525 0.000000e+00 5895.0
8 TraesCS3A01G201000 chr3D 97.909 3348 52 9 4913 8247 250044366 250041024 0.000000e+00 5779.0
9 TraesCS3A01G201000 chr3D 97.572 1359 23 4 1 1357 250049567 250048217 0.000000e+00 2318.0
10 TraesCS3A01G201000 chr3D 93.976 83 4 1 1854 1936 413766160 413766079 3.290000e-24 124.0
11 TraesCS3A01G201000 chr3D 97.143 35 1 0 3382 3416 535388226 535388260 9.420000e-05 60.2
12 TraesCS3A01G201000 chr1D 96.476 454 14 2 8240 8692 408061763 408062215 0.000000e+00 749.0
13 TraesCS3A01G201000 chr1D 97.727 220 5 0 8248 8467 408068652 408068871 6.370000e-101 379.0
14 TraesCS3A01G201000 chr1D 97.701 174 4 0 5112 5285 196817848 196817675 5.100000e-77 300.0
15 TraesCS3A01G201000 chr7A 92.377 446 32 2 8248 8692 277650268 277650712 1.230000e-177 634.0
16 TraesCS3A01G201000 chr7A 91.284 218 19 0 8248 8465 277657198 277657415 1.830000e-76 298.0
17 TraesCS3A01G201000 chr7A 89.209 139 11 3 3368 3504 137769072 137769208 4.170000e-38 171.0
18 TraesCS3A01G201000 chrUn 90.337 445 28 1 8248 8692 91548412 91547983 3.520000e-158 569.0
19 TraesCS3A01G201000 chr5D 98.286 175 3 0 5108 5282 274578003 274578177 3.050000e-79 307.0
20 TraesCS3A01G201000 chr5D 90.566 159 11 3 8537 8692 52626567 52626410 3.180000e-49 207.0
21 TraesCS3A01G201000 chr5D 97.468 79 2 0 1854 1932 51002375 51002453 1.520000e-27 135.0
22 TraesCS3A01G201000 chr2B 98.256 172 3 0 5114 5285 28427340 28427169 1.420000e-77 302.0
23 TraesCS3A01G201000 chr2B 92.040 201 15 1 5082 5281 190234963 190234763 1.850000e-71 281.0
24 TraesCS3A01G201000 chr2D 96.648 179 5 1 5114 5291 426427798 426427976 6.600000e-76 296.0
25 TraesCS3A01G201000 chr2D 91.195 159 10 2 8537 8692 499912107 499911950 6.840000e-51 213.0
26 TraesCS3A01G201000 chr2D 79.661 118 12 8 3386 3502 555162842 555162736 3.370000e-09 75.0
27 TraesCS3A01G201000 chr7D 95.604 182 7 1 5100 5281 192936004 192936184 3.070000e-74 291.0
28 TraesCS3A01G201000 chr7D 95.135 185 8 1 5098 5282 384148821 384149004 3.070000e-74 291.0
29 TraesCS3A01G201000 chr6D 93.605 172 10 1 6101 6272 445038629 445038799 1.120000e-63 255.0
30 TraesCS3A01G201000 chr4A 79.737 380 48 16 3479 3841 631385305 631384938 1.870000e-61 248.0
31 TraesCS3A01G201000 chr4A 94.231 52 3 0 3877 3928 631384922 631384871 7.230000e-11 80.5
32 TraesCS3A01G201000 chr1A 84.490 245 18 16 8454 8692 118282318 118282548 3.160000e-54 224.0
33 TraesCS3A01G201000 chr1A 91.195 159 10 3 8537 8692 516384574 516384731 6.840000e-51 213.0
34 TraesCS3A01G201000 chr1A 91.304 92 6 2 1838 1929 85835109 85835020 3.290000e-24 124.0
35 TraesCS3A01G201000 chr6A 84.362 243 21 14 8454 8692 464139885 464140114 1.140000e-53 222.0
36 TraesCS3A01G201000 chr6A 84.672 137 17 3 2126 2260 221752576 221752710 5.470000e-27 134.0
37 TraesCS3A01G201000 chr5B 97.368 76 2 0 1854 1929 9655921 9655996 7.080000e-26 130.0
38 TraesCS3A01G201000 chr2A 97.368 76 2 0 1851 1926 392455976 392456051 7.080000e-26 130.0
39 TraesCS3A01G201000 chr7B 95.062 81 4 0 1846 1926 131743428 131743348 2.550000e-25 128.0
40 TraesCS3A01G201000 chr7B 84.821 112 15 2 3382 3492 368147221 368147331 2.570000e-20 111.0
41 TraesCS3A01G201000 chr4B 96.154 78 3 0 8248 8325 659626668 659626591 2.550000e-25 128.0
42 TraesCS3A01G201000 chr5A 95.000 80 3 1 1854 1932 8513347 8513426 3.290000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G201000 chr3A 334174703 334183394 8691 False 16052 16052 100.000000 1 8692 1 chr3A.!!$F1 8691
1 TraesCS3A01G201000 chr3B 314349546 314357469 7923 False 6354 8083 95.526500 1 8180 2 chr3B.!!$F1 8179
2 TraesCS3A01G201000 chr3D 250041024 250049567 8543 True 4664 5895 97.390667 1 8247 3 chr3D.!!$R2 8246

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
170 174 0.322456 ATACACACACGCAAGGCCAT 60.322 50.000 5.01 0.00 46.39 4.40 F
173 177 1.968017 ACACACGCAAGGCCATGAG 60.968 57.895 13.26 11.70 46.39 2.90 F
406 410 2.028112 TGCTAATTCACGCAGGACTCTT 60.028 45.455 0.00 0.00 0.00 2.85 F
1259 1263 1.559682 ACCACCAAATGCTCTCCGTAT 59.440 47.619 0.00 0.00 0.00 3.06 F
1770 1936 1.068753 CCTGCTAGCCATGGAGACG 59.931 63.158 18.40 0.79 0.00 4.18 F
3348 3516 1.528161 GGCATTGCTTTGCAGTTTGAC 59.472 47.619 8.82 0.00 44.59 3.18 F
4195 4379 0.384309 ACGACTCAAAGAGCACGACA 59.616 50.000 16.52 0.00 36.72 4.35 F
4201 4385 2.728839 CTCAAAGAGCACGACAAGTCTC 59.271 50.000 0.00 0.00 0.00 3.36 F
4231 4415 2.884827 ACGACTAGTTTATCAACCGCC 58.115 47.619 0.00 0.00 32.70 6.13 F
5976 6329 2.158385 AGTGGTGAGGAGAGTTCAGAGT 60.158 50.000 0.00 0.00 0.00 3.24 F
6529 6886 0.538584 ACTGCAATGCGAGATCCTGA 59.461 50.000 10.68 0.00 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1245 1249 3.136763 CTGCATCATACGGAGAGCATTT 58.863 45.455 0.00 0.00 39.04 2.32 R
1259 1263 3.275999 CAATCTGTGTCATCCTGCATCA 58.724 45.455 0.00 0.00 0.00 3.07 R
1770 1936 3.428045 GGAGCATGTGTTCCAACTAATGC 60.428 47.826 10.56 16.11 43.82 3.56 R
3144 3312 1.953559 GCCTTATGCACTCGGATCAA 58.046 50.000 0.00 0.00 40.77 2.57 R
3433 3601 2.739292 TGTCGACTTGTTCAGCAGTAC 58.261 47.619 17.92 0.00 0.00 2.73 R
4225 4409 1.571215 GATTTTCGTGTCGGGCGGTT 61.571 55.000 0.00 0.00 0.00 4.44 R
5106 5459 5.485620 GAACGGAGGGAGTACAAAACTATT 58.514 41.667 0.00 0.00 39.07 1.73 R
5208 5561 6.127563 TGACTACATACGGAGCAAAATGAGTA 60.128 38.462 0.00 0.00 0.00 2.59 R
5984 6337 9.717942 GATATATGGCACTTCAGAGAATAAACT 57.282 33.333 0.00 0.00 0.00 2.66 R
7036 7393 2.673043 GCCTTTGTCAATGTCCATGCTG 60.673 50.000 0.00 0.00 0.00 4.41 R
8052 8412 0.036388 TTCCTAAGCCAGCGACCAAG 60.036 55.000 0.00 0.00 0.00 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 133 5.992829 TCTGAAGCTCCACGTTACAATTTTA 59.007 36.000 0.00 0.00 0.00 1.52
140 142 3.191791 ACGTTACAATTTTATGCGGCCTT 59.808 39.130 0.00 0.00 0.00 4.35
149 151 4.319139 TTTATGCGGCCTTACGTGTATA 57.681 40.909 0.00 0.00 35.98 1.47
154 158 4.985413 TGCGGCCTTACGTGTATATATAC 58.015 43.478 14.86 14.86 35.98 1.47
170 174 0.322456 ATACACACACGCAAGGCCAT 60.322 50.000 5.01 0.00 46.39 4.40
173 177 1.968017 ACACACGCAAGGCCATGAG 60.968 57.895 13.26 11.70 46.39 2.90
406 410 2.028112 TGCTAATTCACGCAGGACTCTT 60.028 45.455 0.00 0.00 0.00 2.85
503 507 7.386573 GGACCCAAACCACTTAAATGTATTTTG 59.613 37.037 0.00 0.00 0.00 2.44
1245 1249 7.885922 ACATATTTAACATGTCTGTAACCACCA 59.114 33.333 0.00 0.00 33.36 4.17
1259 1263 1.559682 ACCACCAAATGCTCTCCGTAT 59.440 47.619 0.00 0.00 0.00 3.06
1553 1719 5.389935 GCCTTCTTGTTCTATGCGTATATGC 60.390 44.000 10.13 10.13 0.00 3.14
1615 1781 9.530633 AGTTACTAATTCGAGTCATAATCAACC 57.469 33.333 0.00 0.00 0.00 3.77
1664 1830 5.664457 TCTGCAGGTACTCTTTCATGTATG 58.336 41.667 15.13 0.00 34.60 2.39
1770 1936 1.068753 CCTGCTAGCCATGGAGACG 59.931 63.158 18.40 0.79 0.00 4.18
1914 2080 3.676291 AGGCTTTGTTGTTGTTGTTGT 57.324 38.095 0.00 0.00 0.00 3.32
1915 2081 4.001618 AGGCTTTGTTGTTGTTGTTGTT 57.998 36.364 0.00 0.00 0.00 2.83
1916 2082 3.745458 AGGCTTTGTTGTTGTTGTTGTTG 59.255 39.130 0.00 0.00 0.00 3.33
1917 2083 3.496507 GGCTTTGTTGTTGTTGTTGTTGT 59.503 39.130 0.00 0.00 0.00 3.32
1918 2084 4.024472 GGCTTTGTTGTTGTTGTTGTTGTT 60.024 37.500 0.00 0.00 0.00 2.83
1919 2085 4.903016 GCTTTGTTGTTGTTGTTGTTGTTG 59.097 37.500 0.00 0.00 0.00 3.33
1920 2086 5.503194 GCTTTGTTGTTGTTGTTGTTGTTGT 60.503 36.000 0.00 0.00 0.00 3.32
1921 2087 6.422776 TTTGTTGTTGTTGTTGTTGTTGTT 57.577 29.167 0.00 0.00 0.00 2.83
1922 2088 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
1923 2089 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
1924 2090 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
1925 2091 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
1929 2095 4.508124 TGTTGTTGTTGTTGTTGTTGAACC 59.492 37.500 0.00 0.00 0.00 3.62
1942 2108 4.640771 TGTTGAACCTTCTTGGATAGCT 57.359 40.909 0.00 0.00 39.71 3.32
2236 2402 8.611757 GTTCACAAGAAGTTGCCAAATTTTTAT 58.388 29.630 0.00 0.00 37.14 1.40
2328 2495 2.500504 GGTGGTTTGGTTTTGGGTGTTA 59.499 45.455 0.00 0.00 0.00 2.41
2498 2665 2.245379 CCCCACCCATCCCTCCAAA 61.245 63.158 0.00 0.00 0.00 3.28
2525 2692 7.869937 CCTGGTATCACTGACTTTGACTATATG 59.130 40.741 0.00 0.00 0.00 1.78
2933 3100 8.053026 TCTGTAGAGGACTTTACAGTGTTATC 57.947 38.462 21.96 0.00 44.43 1.75
2934 3101 7.889073 TCTGTAGAGGACTTTACAGTGTTATCT 59.111 37.037 21.96 0.00 44.43 1.98
2935 3102 7.827701 TGTAGAGGACTTTACAGTGTTATCTG 58.172 38.462 0.00 0.00 40.80 2.90
2947 3115 4.623167 CAGTGTTATCTGGTCAAAGTCTCG 59.377 45.833 0.00 0.00 0.00 4.04
2959 3127 3.887110 TCAAAGTCTCGTACTGAAGACCA 59.113 43.478 13.27 0.00 38.88 4.02
3144 3312 7.816031 TGCGCTAAGTATAGTTTTAAGTGTTCT 59.184 33.333 9.73 0.00 0.00 3.01
3305 3473 6.238648 TGAAGTCCTTAAAAGAGCCTTTAGG 58.761 40.000 8.89 8.89 38.53 2.69
3348 3516 1.528161 GGCATTGCTTTGCAGTTTGAC 59.472 47.619 8.82 0.00 44.59 3.18
3795 3963 3.117512 GGCAGGGGAGAAAATGGAATCTA 60.118 47.826 0.00 0.00 0.00 1.98
3796 3964 4.536765 GCAGGGGAGAAAATGGAATCTAA 58.463 43.478 0.00 0.00 0.00 2.10
3797 3965 4.582240 GCAGGGGAGAAAATGGAATCTAAG 59.418 45.833 0.00 0.00 0.00 2.18
4056 4238 3.064324 GGTTGCAATGCTCCCGCT 61.064 61.111 6.82 0.00 36.97 5.52
4168 4352 4.281941 GCTCATTTATCCCCTCCCAAATTC 59.718 45.833 0.00 0.00 0.00 2.17
4195 4379 0.384309 ACGACTCAAAGAGCACGACA 59.616 50.000 16.52 0.00 36.72 4.35
4201 4385 2.728839 CTCAAAGAGCACGACAAGTCTC 59.271 50.000 0.00 0.00 0.00 3.36
4222 4406 8.194104 AGTCTCGACTATTCTACGACTAGTTTA 58.806 37.037 0.00 0.00 40.43 2.01
4225 4409 8.877808 TCGACTATTCTACGACTAGTTTATCA 57.122 34.615 0.00 0.00 30.15 2.15
4231 4415 2.884827 ACGACTAGTTTATCAACCGCC 58.115 47.619 0.00 0.00 32.70 6.13
4270 4454 5.837437 AGTCGATAATGACATTGAGACTCC 58.163 41.667 19.96 5.45 41.41 3.85
4275 4459 7.667635 TCGATAATGACATTGAGACTCCTAGAT 59.332 37.037 11.05 0.00 0.00 1.98
4276 4460 7.967854 CGATAATGACATTGAGACTCCTAGATC 59.032 40.741 11.05 0.85 0.00 2.75
4322 4506 5.124645 ACTAGTCCTTCGACTCGTAATCAT 58.875 41.667 0.00 0.00 46.90 2.45
4323 4507 4.985538 AGTCCTTCGACTCGTAATCATT 57.014 40.909 0.00 0.00 46.90 2.57
4324 4508 4.673441 AGTCCTTCGACTCGTAATCATTG 58.327 43.478 0.00 0.00 46.90 2.82
4334 4518 5.437060 ACTCGTAATCATTGTTGCCCTAAT 58.563 37.500 0.00 0.00 0.00 1.73
4787 4972 6.325919 TCGTTAACTTGCAATCCAGAATTT 57.674 33.333 0.00 0.00 0.00 1.82
4946 5293 9.317936 TGTCTACTGTTGAATTTATATGCTGAG 57.682 33.333 0.00 0.00 0.00 3.35
5126 5479 7.910441 TTTTAATAGTTTTGTACTCCCTCCG 57.090 36.000 0.00 0.00 38.33 4.63
5223 5576 6.313905 AGTGTAGATTTACTCATTTTGCTCCG 59.686 38.462 0.00 0.00 0.00 4.63
5228 5581 6.823689 AGATTTACTCATTTTGCTCCGTATGT 59.176 34.615 0.00 0.00 0.00 2.29
5236 5589 5.648178 TTTTGCTCCGTATGTAGTCACTA 57.352 39.130 0.00 0.00 0.00 2.74
5291 5644 3.071167 ACGGAGGGAGTATTTTGGATAGC 59.929 47.826 0.00 0.00 0.00 2.97
5756 6109 6.393990 CAAAGGATATAGAGCATTAGAGCGT 58.606 40.000 0.00 0.00 40.15 5.07
5976 6329 2.158385 AGTGGTGAGGAGAGTTCAGAGT 60.158 50.000 0.00 0.00 0.00 3.24
5984 6337 3.073798 AGGAGAGTTCAGAGTCAGAGTCA 59.926 47.826 8.03 0.00 0.00 3.41
6059 6412 6.520272 AGGACTGAAGCATGTAAGTATCATC 58.480 40.000 0.00 0.00 0.00 2.92
6139 6495 9.113838 GCTGATAGGATAATTCTTTTTCTGTCA 57.886 33.333 0.00 0.00 0.00 3.58
6448 6804 6.031003 GCGAAGATTTTACGTGTATGTTTGTG 59.969 38.462 0.00 0.00 0.00 3.33
6469 6826 6.620678 TGTGTCTTTTGTTCTCTTTTCCTTG 58.379 36.000 0.00 0.00 0.00 3.61
6529 6886 0.538584 ACTGCAATGCGAGATCCTGA 59.461 50.000 10.68 0.00 0.00 3.86
6624 6981 5.395103 GGAGCTTGATGTCTATGACTTCTGT 60.395 44.000 12.54 0.00 37.53 3.41
6804 7161 4.689612 AGTAGAGGTGAAAACAAGCAGA 57.310 40.909 0.00 0.00 0.00 4.26
6805 7162 5.036117 AGTAGAGGTGAAAACAAGCAGAA 57.964 39.130 0.00 0.00 0.00 3.02
7036 7393 1.771255 ACTAGTGCTGGGGAATCATCC 59.229 52.381 0.00 0.00 45.77 3.51
7208 7567 4.161377 AGCAACTTCTCAGAATACTCTCCC 59.839 45.833 0.00 0.00 0.00 4.30
7330 7689 8.844244 AGAAACAATTAACTGGCATCTATGATC 58.156 33.333 0.00 0.00 0.00 2.92
7600 7959 8.184192 AGTTGAAAGAATGTCGGCTTAAATATG 58.816 33.333 0.00 0.00 0.00 1.78
7601 7960 7.624360 TGAAAGAATGTCGGCTTAAATATGT 57.376 32.000 0.00 0.00 0.00 2.29
8030 8390 3.510360 ACTTGAGTAGCGTAACACCTGAT 59.490 43.478 0.00 0.00 0.00 2.90
8051 8411 5.515270 TGATCGTCGCTATGAAACTGTAAAG 59.485 40.000 0.00 0.00 0.00 1.85
8052 8412 3.611113 TCGTCGCTATGAAACTGTAAAGC 59.389 43.478 0.00 0.00 0.00 3.51
8248 8616 9.950680 AAGAATAGACTTGTTATGTGTTTGTTG 57.049 29.630 0.00 0.00 0.00 3.33
8249 8617 9.120538 AGAATAGACTTGTTATGTGTTTGTTGT 57.879 29.630 0.00 0.00 0.00 3.32
8250 8618 9.730420 GAATAGACTTGTTATGTGTTTGTTGTT 57.270 29.630 0.00 0.00 0.00 2.83
8253 8621 7.193595 AGACTTGTTATGTGTTTGTTGTTAGC 58.806 34.615 0.00 0.00 0.00 3.09
8254 8622 5.968848 ACTTGTTATGTGTTTGTTGTTAGCG 59.031 36.000 0.00 0.00 0.00 4.26
8255 8623 5.487153 TGTTATGTGTTTGTTGTTAGCGT 57.513 34.783 0.00 0.00 0.00 5.07
8256 8624 5.267009 TGTTATGTGTTTGTTGTTAGCGTG 58.733 37.500 0.00 0.00 0.00 5.34
8257 8625 5.064834 TGTTATGTGTTTGTTGTTAGCGTGA 59.935 36.000 0.00 0.00 0.00 4.35
8258 8626 4.624336 ATGTGTTTGTTGTTAGCGTGAA 57.376 36.364 0.00 0.00 0.00 3.18
8259 8627 4.421033 TGTGTTTGTTGTTAGCGTGAAA 57.579 36.364 0.00 0.00 0.00 2.69
8260 8628 4.795268 TGTGTTTGTTGTTAGCGTGAAAA 58.205 34.783 0.00 0.00 0.00 2.29
8261 8629 4.617645 TGTGTTTGTTGTTAGCGTGAAAAC 59.382 37.500 0.00 0.00 0.00 2.43
8262 8630 3.846896 TGTTTGTTGTTAGCGTGAAAACG 59.153 39.130 0.00 0.00 0.00 3.60
8263 8631 4.090034 GTTTGTTGTTAGCGTGAAAACGA 58.910 39.130 1.87 0.00 34.64 3.85
8264 8632 3.579147 TGTTGTTAGCGTGAAAACGAG 57.421 42.857 1.87 0.00 34.64 4.18
8265 8633 3.188492 TGTTGTTAGCGTGAAAACGAGA 58.812 40.909 1.87 0.00 34.64 4.04
8266 8634 3.617706 TGTTGTTAGCGTGAAAACGAGAA 59.382 39.130 1.87 0.00 34.64 2.87
8267 8635 4.201576 GTTGTTAGCGTGAAAACGAGAAG 58.798 43.478 1.87 0.00 34.64 2.85
8268 8636 3.450578 TGTTAGCGTGAAAACGAGAAGT 58.549 40.909 1.87 0.00 34.64 3.01
8269 8637 3.244345 TGTTAGCGTGAAAACGAGAAGTG 59.756 43.478 1.87 0.00 34.64 3.16
8270 8638 2.218953 AGCGTGAAAACGAGAAGTGA 57.781 45.000 1.87 0.00 34.64 3.41
8271 8639 2.755650 AGCGTGAAAACGAGAAGTGAT 58.244 42.857 1.87 0.00 34.64 3.06
8272 8640 3.131396 AGCGTGAAAACGAGAAGTGATT 58.869 40.909 1.87 0.00 34.64 2.57
8273 8641 3.059597 AGCGTGAAAACGAGAAGTGATTG 60.060 43.478 1.87 0.00 34.64 2.67
8274 8642 3.059868 GCGTGAAAACGAGAAGTGATTGA 60.060 43.478 1.87 0.00 34.64 2.57
8275 8643 4.377431 GCGTGAAAACGAGAAGTGATTGAT 60.377 41.667 1.87 0.00 34.64 2.57
8276 8644 5.679906 CGTGAAAACGAGAAGTGATTGATT 58.320 37.500 0.00 0.00 34.64 2.57
8277 8645 5.561499 CGTGAAAACGAGAAGTGATTGATTG 59.439 40.000 0.00 0.00 34.64 2.67
8278 8646 6.563939 CGTGAAAACGAGAAGTGATTGATTGA 60.564 38.462 0.00 0.00 34.64 2.57
8279 8647 7.132213 GTGAAAACGAGAAGTGATTGATTGAA 58.868 34.615 0.00 0.00 0.00 2.69
8280 8648 7.805071 GTGAAAACGAGAAGTGATTGATTGAAT 59.195 33.333 0.00 0.00 0.00 2.57
8281 8649 7.804600 TGAAAACGAGAAGTGATTGATTGAATG 59.195 33.333 0.00 0.00 0.00 2.67
8282 8650 7.439157 AAACGAGAAGTGATTGATTGAATGA 57.561 32.000 0.00 0.00 0.00 2.57
8283 8651 7.439157 AACGAGAAGTGATTGATTGAATGAA 57.561 32.000 0.00 0.00 0.00 2.57
8284 8652 7.621428 ACGAGAAGTGATTGATTGAATGAAT 57.379 32.000 0.00 0.00 0.00 2.57
8285 8653 7.692088 ACGAGAAGTGATTGATTGAATGAATC 58.308 34.615 9.92 9.92 40.99 2.52
8296 8664 7.991084 TGATTGAATGAATCAGTCTGTTCTT 57.009 32.000 12.04 0.00 44.65 2.52
8297 8665 8.400184 TGATTGAATGAATCAGTCTGTTCTTT 57.600 30.769 12.04 7.60 44.65 2.52
8298 8666 8.509690 TGATTGAATGAATCAGTCTGTTCTTTC 58.490 33.333 21.28 21.28 44.65 2.62
8299 8667 6.808008 TGAATGAATCAGTCTGTTCTTTCC 57.192 37.500 22.96 14.62 37.54 3.13
8300 8668 6.298361 TGAATGAATCAGTCTGTTCTTTCCA 58.702 36.000 22.96 15.87 37.54 3.53
8301 8669 6.944290 TGAATGAATCAGTCTGTTCTTTCCAT 59.056 34.615 22.96 10.25 37.54 3.41
8302 8670 7.449395 TGAATGAATCAGTCTGTTCTTTCCATT 59.551 33.333 22.96 14.92 37.54 3.16
8303 8671 6.564709 TGAATCAGTCTGTTCTTTCCATTG 57.435 37.500 0.00 0.00 0.00 2.82
8304 8672 6.298361 TGAATCAGTCTGTTCTTTCCATTGA 58.702 36.000 0.00 0.00 0.00 2.57
8305 8673 6.944290 TGAATCAGTCTGTTCTTTCCATTGAT 59.056 34.615 0.00 0.00 0.00 2.57
8306 8674 6.998968 ATCAGTCTGTTCTTTCCATTGATC 57.001 37.500 0.00 0.00 0.00 2.92
8307 8675 5.868454 TCAGTCTGTTCTTTCCATTGATCA 58.132 37.500 0.00 0.00 0.00 2.92
8308 8676 6.298361 TCAGTCTGTTCTTTCCATTGATCAA 58.702 36.000 11.26 11.26 0.00 2.57
8309 8677 6.944290 TCAGTCTGTTCTTTCCATTGATCAAT 59.056 34.615 15.36 15.36 0.00 2.57
8310 8678 7.449395 TCAGTCTGTTCTTTCCATTGATCAATT 59.551 33.333 18.41 1.54 0.00 2.32
8311 8679 7.541091 CAGTCTGTTCTTTCCATTGATCAATTG 59.459 37.037 18.41 15.08 0.00 2.32
8312 8680 6.810182 GTCTGTTCTTTCCATTGATCAATTGG 59.190 38.462 18.41 20.36 0.00 3.16
8313 8681 6.040209 TGTTCTTTCCATTGATCAATTGGG 57.960 37.500 24.53 20.61 0.00 4.12
8314 8682 5.543405 TGTTCTTTCCATTGATCAATTGGGT 59.457 36.000 24.53 5.20 0.00 4.51
8315 8683 6.723515 TGTTCTTTCCATTGATCAATTGGGTA 59.276 34.615 24.53 14.67 0.00 3.69
8316 8684 7.399765 TGTTCTTTCCATTGATCAATTGGGTAT 59.600 33.333 24.53 3.99 0.00 2.73
8317 8685 8.912988 GTTCTTTCCATTGATCAATTGGGTATA 58.087 33.333 24.53 11.56 0.00 1.47
8318 8686 8.463930 TCTTTCCATTGATCAATTGGGTATAC 57.536 34.615 24.53 0.00 0.00 1.47
8319 8687 8.058235 TCTTTCCATTGATCAATTGGGTATACA 58.942 33.333 24.53 10.83 0.00 2.29
8320 8688 8.780616 TTTCCATTGATCAATTGGGTATACAT 57.219 30.769 24.53 1.74 0.00 2.29
8321 8689 9.874195 TTTCCATTGATCAATTGGGTATACATA 57.126 29.630 24.53 9.86 0.00 2.29
8322 8690 8.862325 TCCATTGATCAATTGGGTATACATAC 57.138 34.615 24.53 0.00 0.00 2.39
8323 8691 8.443979 TCCATTGATCAATTGGGTATACATACA 58.556 33.333 24.53 0.00 34.98 2.29
8324 8692 9.076781 CCATTGATCAATTGGGTATACATACAA 57.923 33.333 18.41 7.21 34.98 2.41
8326 8694 9.866655 ATTGATCAATTGGGTATACATACAAGT 57.133 29.630 15.36 3.57 34.98 3.16
8328 8696 9.996554 TGATCAATTGGGTATACATACAAGTAG 57.003 33.333 5.42 2.32 34.98 2.57
8331 8699 8.647796 TCAATTGGGTATACATACAAGTAGAGG 58.352 37.037 5.42 0.00 34.98 3.69
8332 8700 6.989155 TTGGGTATACATACAAGTAGAGGG 57.011 41.667 5.01 0.00 34.98 4.30
8333 8701 5.399991 TGGGTATACATACAAGTAGAGGGG 58.600 45.833 5.01 0.00 34.98 4.79
8334 8702 5.102956 TGGGTATACATACAAGTAGAGGGGT 60.103 44.000 5.01 0.00 34.98 4.95
8335 8703 5.245526 GGGTATACATACAAGTAGAGGGGTG 59.754 48.000 5.01 0.00 34.98 4.61
8336 8704 4.957684 ATACATACAAGTAGAGGGGTGC 57.042 45.455 0.00 0.00 0.00 5.01
8337 8705 1.838077 ACATACAAGTAGAGGGGTGCC 59.162 52.381 0.00 0.00 0.00 5.01
8338 8706 2.119495 CATACAAGTAGAGGGGTGCCT 58.881 52.381 0.00 0.00 0.00 4.75
8339 8707 1.861982 TACAAGTAGAGGGGTGCCTC 58.138 55.000 0.00 0.00 37.11 4.70
8340 8708 0.178903 ACAAGTAGAGGGGTGCCTCA 60.179 55.000 0.00 0.00 39.13 3.86
8341 8709 0.984230 CAAGTAGAGGGGTGCCTCAA 59.016 55.000 0.00 0.00 39.13 3.02
8342 8710 1.065854 CAAGTAGAGGGGTGCCTCAAG 60.066 57.143 0.00 0.00 39.13 3.02
8343 8711 0.413832 AGTAGAGGGGTGCCTCAAGA 59.586 55.000 0.00 0.00 39.13 3.02
8344 8712 0.827368 GTAGAGGGGTGCCTCAAGAG 59.173 60.000 0.00 0.00 39.13 2.85
8345 8713 0.710588 TAGAGGGGTGCCTCAAGAGA 59.289 55.000 0.00 0.00 39.13 3.10
8346 8714 0.617249 AGAGGGGTGCCTCAAGAGAG 60.617 60.000 0.00 0.00 41.72 3.20
8347 8715 2.250741 GAGGGGTGCCTCAAGAGAGC 62.251 65.000 0.00 1.50 40.68 4.09
8348 8716 2.596851 GGGGTGCCTCAAGAGAGCA 61.597 63.158 8.51 8.51 40.68 4.26
8349 8717 1.376553 GGGTGCCTCAAGAGAGCAC 60.377 63.158 23.60 23.60 45.91 4.40
8350 8718 4.292784 GTGCCTCAAGAGAGCACC 57.707 61.111 22.26 11.56 43.46 5.01
8351 8719 1.739562 GTGCCTCAAGAGAGCACCG 60.740 63.158 22.26 0.22 43.46 4.94
8352 8720 1.908299 TGCCTCAAGAGAGCACCGA 60.908 57.895 8.51 0.00 40.68 4.69
8353 8721 1.446966 GCCTCAAGAGAGCACCGAC 60.447 63.158 0.00 0.00 40.68 4.79
8354 8722 1.153939 CCTCAAGAGAGCACCGACG 60.154 63.158 0.00 0.00 40.68 5.12
8355 8723 1.587043 CCTCAAGAGAGCACCGACGA 61.587 60.000 0.00 0.00 40.68 4.20
8356 8724 0.241213 CTCAAGAGAGCACCGACGAA 59.759 55.000 0.00 0.00 34.61 3.85
8357 8725 0.241213 TCAAGAGAGCACCGACGAAG 59.759 55.000 0.00 0.00 0.00 3.79
8358 8726 0.734253 CAAGAGAGCACCGACGAAGG 60.734 60.000 0.00 0.00 37.30 3.46
8359 8727 0.894184 AAGAGAGCACCGACGAAGGA 60.894 55.000 7.84 0.00 34.73 3.36
8360 8728 0.894184 AGAGAGCACCGACGAAGGAA 60.894 55.000 7.84 0.00 34.73 3.36
8361 8729 0.456995 GAGAGCACCGACGAAGGAAG 60.457 60.000 7.84 1.95 34.73 3.46
8362 8730 0.894184 AGAGCACCGACGAAGGAAGA 60.894 55.000 7.84 0.00 34.73 2.87
8363 8731 0.456995 GAGCACCGACGAAGGAAGAG 60.457 60.000 7.84 0.00 34.73 2.85
8364 8732 1.446272 GCACCGACGAAGGAAGAGG 60.446 63.158 7.84 0.00 34.73 3.69
8365 8733 1.446272 CACCGACGAAGGAAGAGGC 60.446 63.158 7.84 0.00 34.73 4.70
8366 8734 1.906824 ACCGACGAAGGAAGAGGCA 60.907 57.895 7.84 0.00 34.73 4.75
8367 8735 1.446272 CCGACGAAGGAAGAGGCAC 60.446 63.158 0.00 0.00 0.00 5.01
8368 8736 1.446272 CGACGAAGGAAGAGGCACC 60.446 63.158 0.00 0.00 0.00 5.01
8369 8737 1.079057 GACGAAGGAAGAGGCACCC 60.079 63.158 0.00 0.00 0.00 4.61
8370 8738 1.827399 GACGAAGGAAGAGGCACCCA 61.827 60.000 0.00 0.00 0.00 4.51
8371 8739 1.201429 ACGAAGGAAGAGGCACCCAT 61.201 55.000 0.00 0.00 0.00 4.00
8372 8740 0.830648 CGAAGGAAGAGGCACCCATA 59.169 55.000 0.00 0.00 0.00 2.74
8373 8741 1.473434 CGAAGGAAGAGGCACCCATAC 60.473 57.143 0.00 0.00 0.00 2.39
8374 8742 0.919710 AAGGAAGAGGCACCCATACC 59.080 55.000 0.00 0.00 0.00 2.73
8375 8743 1.146263 GGAAGAGGCACCCATACCG 59.854 63.158 0.00 0.00 0.00 4.02
8376 8744 1.146263 GAAGAGGCACCCATACCGG 59.854 63.158 0.00 0.00 0.00 5.28
8377 8745 1.306654 AAGAGGCACCCATACCGGA 60.307 57.895 9.46 0.00 36.56 5.14
8378 8746 1.623542 AAGAGGCACCCATACCGGAC 61.624 60.000 9.46 0.00 36.56 4.79
8379 8747 2.285069 AGGCACCCATACCGGACA 60.285 61.111 9.46 0.00 36.56 4.02
8380 8748 2.124860 GGCACCCATACCGGACAC 60.125 66.667 9.46 0.00 36.56 3.67
8381 8749 2.666207 GCACCCATACCGGACACA 59.334 61.111 9.46 0.00 36.56 3.72
8382 8750 1.449601 GCACCCATACCGGACACAG 60.450 63.158 9.46 0.00 36.56 3.66
8383 8751 1.220749 CACCCATACCGGACACAGG 59.779 63.158 9.46 4.41 36.56 4.00
8384 8752 2.189521 CCCATACCGGACACAGGC 59.810 66.667 9.46 0.00 36.56 4.85
8385 8753 2.202878 CCATACCGGACACAGGCG 60.203 66.667 9.46 0.00 36.56 5.52
8386 8754 2.577059 CATACCGGACACAGGCGT 59.423 61.111 9.46 0.00 0.00 5.68
8387 8755 1.518572 CATACCGGACACAGGCGTC 60.519 63.158 9.46 0.00 35.03 5.19
8392 8760 2.126189 GGACACAGGCGTCCGTAC 60.126 66.667 0.00 0.00 45.77 3.67
8393 8761 2.646719 GACACAGGCGTCCGTACA 59.353 61.111 0.00 0.00 0.00 2.90
8394 8762 1.443872 GACACAGGCGTCCGTACAG 60.444 63.158 0.00 0.00 0.00 2.74
8395 8763 2.126071 CACAGGCGTCCGTACAGG 60.126 66.667 0.00 0.00 42.97 4.00
8396 8764 3.379445 ACAGGCGTCCGTACAGGG 61.379 66.667 0.00 0.00 41.52 4.45
8397 8765 4.143333 CAGGCGTCCGTACAGGGG 62.143 72.222 0.00 0.00 41.52 4.79
8398 8766 4.371417 AGGCGTCCGTACAGGGGA 62.371 66.667 0.00 0.00 41.52 4.81
8399 8767 3.384532 GGCGTCCGTACAGGGGAA 61.385 66.667 0.00 0.00 41.52 3.97
8400 8768 2.183555 GCGTCCGTACAGGGGAAG 59.816 66.667 0.00 0.00 41.52 3.46
8401 8769 2.890371 CGTCCGTACAGGGGAAGG 59.110 66.667 0.00 0.00 41.52 3.46
8402 8770 2.718073 CGTCCGTACAGGGGAAGGG 61.718 68.421 0.00 0.00 41.52 3.95
8403 8771 1.305549 GTCCGTACAGGGGAAGGGA 60.306 63.158 0.00 0.00 41.52 4.20
8404 8772 0.690077 GTCCGTACAGGGGAAGGGAT 60.690 60.000 0.00 0.00 41.52 3.85
8405 8773 0.689745 TCCGTACAGGGGAAGGGATG 60.690 60.000 0.00 0.00 41.52 3.51
8406 8774 1.146263 CGTACAGGGGAAGGGATGC 59.854 63.158 0.00 0.00 0.00 3.91
8407 8775 1.338136 CGTACAGGGGAAGGGATGCT 61.338 60.000 0.00 0.00 0.00 3.79
8408 8776 1.802553 GTACAGGGGAAGGGATGCTA 58.197 55.000 0.00 0.00 0.00 3.49
8409 8777 1.416772 GTACAGGGGAAGGGATGCTAC 59.583 57.143 0.00 0.00 0.00 3.58
8410 8778 0.988678 ACAGGGGAAGGGATGCTACC 60.989 60.000 0.00 0.00 0.00 3.18
8417 8785 4.613143 GGGATGCTACCCTACGGA 57.387 61.111 10.72 0.00 45.90 4.69
8418 8786 2.047769 GGGATGCTACCCTACGGAC 58.952 63.158 10.72 0.00 45.90 4.79
8419 8787 0.757935 GGGATGCTACCCTACGGACA 60.758 60.000 10.72 0.00 45.90 4.02
8420 8788 0.388294 GGATGCTACCCTACGGACAC 59.612 60.000 0.00 0.00 0.00 3.67
8421 8789 1.108776 GATGCTACCCTACGGACACA 58.891 55.000 0.00 0.00 0.00 3.72
8422 8790 1.067212 GATGCTACCCTACGGACACAG 59.933 57.143 0.00 0.00 0.00 3.66
8423 8791 0.968901 TGCTACCCTACGGACACAGG 60.969 60.000 0.00 0.00 0.00 4.00
8424 8792 1.814527 CTACCCTACGGACACAGGC 59.185 63.158 0.00 0.00 0.00 4.85
8425 8793 2.001361 CTACCCTACGGACACAGGCG 62.001 65.000 0.00 0.00 0.00 5.52
8426 8794 2.769652 TACCCTACGGACACAGGCGT 62.770 60.000 0.00 0.00 0.00 5.68
8427 8795 2.181021 CCTACGGACACAGGCGTC 59.819 66.667 0.00 0.00 35.03 5.19
8432 8800 2.126189 GGACACAGGCGTCCGTAC 60.126 66.667 0.00 0.00 45.77 3.67
8442 8810 3.455685 GTCCGTACGACGCTTTGG 58.544 61.111 18.76 0.00 40.91 3.28
8443 8811 1.081242 GTCCGTACGACGCTTTGGA 60.081 57.895 18.76 0.00 40.91 3.53
8444 8812 1.081242 TCCGTACGACGCTTTGGAC 60.081 57.895 18.76 0.00 40.91 4.02
8445 8813 1.372004 CCGTACGACGCTTTGGACA 60.372 57.895 18.76 0.00 40.91 4.02
8446 8814 0.940519 CCGTACGACGCTTTGGACAA 60.941 55.000 18.76 0.00 40.91 3.18
8447 8815 0.854062 CGTACGACGCTTTGGACAAA 59.146 50.000 10.44 0.00 33.65 2.83
8448 8816 1.258458 CGTACGACGCTTTGGACAAAA 59.742 47.619 10.44 0.00 33.65 2.44
8449 8817 2.096614 CGTACGACGCTTTGGACAAAAT 60.097 45.455 10.44 0.00 33.65 1.82
8450 8818 3.121611 CGTACGACGCTTTGGACAAAATA 59.878 43.478 10.44 0.00 33.65 1.40
8451 8819 4.376210 CGTACGACGCTTTGGACAAAATAA 60.376 41.667 10.44 0.00 33.65 1.40
8452 8820 3.880610 ACGACGCTTTGGACAAAATAAC 58.119 40.909 0.00 0.00 0.00 1.89
8453 8821 3.231160 CGACGCTTTGGACAAAATAACC 58.769 45.455 0.00 0.00 0.00 2.85
8454 8822 3.058501 CGACGCTTTGGACAAAATAACCT 60.059 43.478 0.00 0.00 0.00 3.50
8455 8823 4.152759 CGACGCTTTGGACAAAATAACCTA 59.847 41.667 0.00 0.00 0.00 3.08
8456 8824 5.163794 CGACGCTTTGGACAAAATAACCTAT 60.164 40.000 0.00 0.00 0.00 2.57
8457 8825 6.584185 ACGCTTTGGACAAAATAACCTATT 57.416 33.333 0.00 0.00 0.00 1.73
8458 8826 6.988522 ACGCTTTGGACAAAATAACCTATTT 58.011 32.000 0.00 0.00 39.92 1.40
8459 8827 7.088272 ACGCTTTGGACAAAATAACCTATTTC 58.912 34.615 0.00 0.00 37.39 2.17
8460 8828 7.039993 ACGCTTTGGACAAAATAACCTATTTCT 60.040 33.333 0.00 0.00 37.39 2.52
8461 8829 8.455682 CGCTTTGGACAAAATAACCTATTTCTA 58.544 33.333 0.00 0.00 37.39 2.10
8466 8834 9.802039 TGGACAAAATAACCTATTTCTAACACT 57.198 29.630 0.00 0.00 37.39 3.55
8469 8837 9.239551 ACAAAATAACCTATTTCTAACACTCCC 57.760 33.333 0.00 0.00 37.39 4.30
8470 8838 9.462606 CAAAATAACCTATTTCTAACACTCCCT 57.537 33.333 0.00 0.00 37.39 4.20
8471 8839 9.682465 AAAATAACCTATTTCTAACACTCCCTC 57.318 33.333 0.00 0.00 37.39 4.30
8472 8840 8.625467 AATAACCTATTTCTAACACTCCCTCT 57.375 34.615 0.00 0.00 0.00 3.69
8473 8841 6.954352 AACCTATTTCTAACACTCCCTCTT 57.046 37.500 0.00 0.00 0.00 2.85
8474 8842 6.301169 ACCTATTTCTAACACTCCCTCTTG 57.699 41.667 0.00 0.00 0.00 3.02
8475 8843 5.785940 ACCTATTTCTAACACTCCCTCTTGT 59.214 40.000 0.00 0.00 0.00 3.16
8476 8844 6.958192 ACCTATTTCTAACACTCCCTCTTGTA 59.042 38.462 0.00 0.00 0.00 2.41
8477 8845 7.093421 ACCTATTTCTAACACTCCCTCTTGTAC 60.093 40.741 0.00 0.00 0.00 2.90
8478 8846 6.681729 ATTTCTAACACTCCCTCTTGTACA 57.318 37.500 0.00 0.00 0.00 2.90
8479 8847 6.488769 TTTCTAACACTCCCTCTTGTACAA 57.511 37.500 8.28 8.28 0.00 2.41
8480 8848 6.681729 TTCTAACACTCCCTCTTGTACAAT 57.318 37.500 9.13 0.00 0.00 2.71
8481 8849 6.037786 TCTAACACTCCCTCTTGTACAATG 57.962 41.667 9.13 5.19 0.00 2.82
8482 8850 3.059352 ACACTCCCTCTTGTACAATGC 57.941 47.619 9.13 0.00 0.00 3.56
8483 8851 2.290323 ACACTCCCTCTTGTACAATGCC 60.290 50.000 9.13 0.00 0.00 4.40
8484 8852 1.066143 ACTCCCTCTTGTACAATGCCG 60.066 52.381 9.13 0.00 0.00 5.69
8485 8853 0.981183 TCCCTCTTGTACAATGCCGT 59.019 50.000 9.13 0.00 0.00 5.68
8486 8854 1.066430 TCCCTCTTGTACAATGCCGTC 60.066 52.381 9.13 0.00 0.00 4.79
8487 8855 1.066143 CCCTCTTGTACAATGCCGTCT 60.066 52.381 9.13 0.00 0.00 4.18
8488 8856 2.615493 CCCTCTTGTACAATGCCGTCTT 60.615 50.000 9.13 0.00 0.00 3.01
8489 8857 2.416547 CCTCTTGTACAATGCCGTCTTG 59.583 50.000 9.13 0.00 0.00 3.02
8490 8858 3.067106 CTCTTGTACAATGCCGTCTTGT 58.933 45.455 9.13 0.00 39.93 3.16
8491 8859 4.242475 CTCTTGTACAATGCCGTCTTGTA 58.758 43.478 9.13 0.00 37.89 2.41
8492 8860 4.827692 TCTTGTACAATGCCGTCTTGTAT 58.172 39.130 9.13 0.00 40.22 2.29
8493 8861 5.242434 TCTTGTACAATGCCGTCTTGTATT 58.758 37.500 9.13 0.00 40.22 1.89
8494 8862 6.399743 TCTTGTACAATGCCGTCTTGTATTA 58.600 36.000 9.13 0.00 40.22 0.98
8495 8863 6.533723 TCTTGTACAATGCCGTCTTGTATTAG 59.466 38.462 9.13 0.00 40.22 1.73
8496 8864 5.726397 TGTACAATGCCGTCTTGTATTAGT 58.274 37.500 0.00 0.00 40.22 2.24
8497 8865 6.865411 TGTACAATGCCGTCTTGTATTAGTA 58.135 36.000 0.00 0.00 40.22 1.82
8498 8866 7.321908 TGTACAATGCCGTCTTGTATTAGTAA 58.678 34.615 0.00 0.00 40.22 2.24
8499 8867 7.982919 TGTACAATGCCGTCTTGTATTAGTAAT 59.017 33.333 0.00 0.17 40.22 1.89
8500 8868 7.478520 ACAATGCCGTCTTGTATTAGTAATC 57.521 36.000 0.00 0.00 35.15 1.75
8501 8869 7.045416 ACAATGCCGTCTTGTATTAGTAATCA 58.955 34.615 0.00 0.00 35.15 2.57
8502 8870 7.715249 ACAATGCCGTCTTGTATTAGTAATCAT 59.285 33.333 0.00 0.00 35.15 2.45
8503 8871 7.891183 ATGCCGTCTTGTATTAGTAATCATC 57.109 36.000 0.00 0.00 0.00 2.92
8504 8872 6.811954 TGCCGTCTTGTATTAGTAATCATCA 58.188 36.000 0.00 0.00 0.00 3.07
8505 8873 7.269316 TGCCGTCTTGTATTAGTAATCATCAA 58.731 34.615 0.00 3.86 0.00 2.57
8506 8874 7.931407 TGCCGTCTTGTATTAGTAATCATCAAT 59.069 33.333 0.00 0.00 0.00 2.57
8507 8875 8.436200 GCCGTCTTGTATTAGTAATCATCAATC 58.564 37.037 0.00 1.64 0.00 2.67
8508 8876 9.698309 CCGTCTTGTATTAGTAATCATCAATCT 57.302 33.333 0.00 0.00 0.00 2.40
8517 8885 9.838339 ATTAGTAATCATCAATCTTCGGAAAGT 57.162 29.630 0.00 0.00 33.95 2.66
8518 8886 7.778470 AGTAATCATCAATCTTCGGAAAGTC 57.222 36.000 0.00 0.00 33.95 3.01
8519 8887 6.763610 AGTAATCATCAATCTTCGGAAAGTCC 59.236 38.462 0.00 0.00 33.95 3.85
8520 8888 4.551702 TCATCAATCTTCGGAAAGTCCA 57.448 40.909 0.00 0.00 35.91 4.02
8521 8889 4.905429 TCATCAATCTTCGGAAAGTCCAA 58.095 39.130 0.00 0.00 35.91 3.53
8522 8890 5.500234 TCATCAATCTTCGGAAAGTCCAAT 58.500 37.500 0.00 0.00 35.91 3.16
8523 8891 5.355071 TCATCAATCTTCGGAAAGTCCAATG 59.645 40.000 0.00 0.00 35.91 2.82
8524 8892 4.651778 TCAATCTTCGGAAAGTCCAATGT 58.348 39.130 0.00 0.00 35.91 2.71
8525 8893 5.070001 TCAATCTTCGGAAAGTCCAATGTT 58.930 37.500 0.00 0.00 35.91 2.71
8526 8894 5.534654 TCAATCTTCGGAAAGTCCAATGTTT 59.465 36.000 0.00 0.00 35.91 2.83
8527 8895 6.712998 TCAATCTTCGGAAAGTCCAATGTTTA 59.287 34.615 0.00 0.00 35.91 2.01
8528 8896 7.393234 TCAATCTTCGGAAAGTCCAATGTTTAT 59.607 33.333 0.00 0.00 35.91 1.40
8529 8897 8.673711 CAATCTTCGGAAAGTCCAATGTTTATA 58.326 33.333 0.00 0.00 35.91 0.98
8530 8898 8.801882 ATCTTCGGAAAGTCCAATGTTTATAA 57.198 30.769 0.00 0.00 35.91 0.98
8531 8899 8.801882 TCTTCGGAAAGTCCAATGTTTATAAT 57.198 30.769 0.00 0.00 35.91 1.28
8532 8900 9.238368 TCTTCGGAAAGTCCAATGTTTATAATT 57.762 29.630 0.00 0.00 35.91 1.40
8533 8901 9.289303 CTTCGGAAAGTCCAATGTTTATAATTG 57.711 33.333 0.00 0.00 35.91 2.32
8534 8902 8.568676 TCGGAAAGTCCAATGTTTATAATTGA 57.431 30.769 0.00 0.00 37.22 2.57
8535 8903 9.184523 TCGGAAAGTCCAATGTTTATAATTGAT 57.815 29.630 0.00 0.00 37.22 2.57
8560 8928 7.939784 ATCTTGTATAACTCCTCCAAAAACC 57.060 36.000 0.00 0.00 0.00 3.27
8561 8929 6.243148 TCTTGTATAACTCCTCCAAAAACCC 58.757 40.000 0.00 0.00 0.00 4.11
8562 8930 5.853572 TGTATAACTCCTCCAAAAACCCT 57.146 39.130 0.00 0.00 0.00 4.34
8563 8931 5.566469 TGTATAACTCCTCCAAAAACCCTG 58.434 41.667 0.00 0.00 0.00 4.45
8564 8932 4.741928 ATAACTCCTCCAAAAACCCTGT 57.258 40.909 0.00 0.00 0.00 4.00
8565 8933 2.364972 ACTCCTCCAAAAACCCTGTG 57.635 50.000 0.00 0.00 0.00 3.66
8566 8934 1.133482 ACTCCTCCAAAAACCCTGTGG 60.133 52.381 0.00 0.00 37.80 4.17
8567 8935 1.144913 CTCCTCCAAAAACCCTGTGGA 59.855 52.381 0.00 0.00 39.14 4.02
8568 8936 1.571457 TCCTCCAAAAACCCTGTGGAA 59.429 47.619 0.00 0.00 40.87 3.53
8569 8937 2.023888 TCCTCCAAAAACCCTGTGGAAA 60.024 45.455 0.00 0.00 40.87 3.13
8570 8938 2.769095 CCTCCAAAAACCCTGTGGAAAA 59.231 45.455 0.00 0.00 40.87 2.29
8571 8939 3.198853 CCTCCAAAAACCCTGTGGAAAAA 59.801 43.478 0.00 0.00 40.87 1.94
8596 8964 9.887629 AAATATGAGGAGAATAGTGCAGATATG 57.112 33.333 0.00 0.00 0.00 1.78
8597 8965 6.931790 ATGAGGAGAATAGTGCAGATATGT 57.068 37.500 0.00 0.00 0.00 2.29
8598 8966 6.737720 TGAGGAGAATAGTGCAGATATGTT 57.262 37.500 0.00 0.00 0.00 2.71
8599 8967 6.519382 TGAGGAGAATAGTGCAGATATGTTG 58.481 40.000 0.00 0.00 0.00 3.33
8600 8968 5.303971 AGGAGAATAGTGCAGATATGTTGC 58.696 41.667 0.00 2.56 41.86 4.17
8601 8969 5.071519 AGGAGAATAGTGCAGATATGTTGCT 59.928 40.000 9.49 0.00 42.02 3.91
8602 8970 6.268617 AGGAGAATAGTGCAGATATGTTGCTA 59.731 38.462 9.49 0.00 42.02 3.49
8603 8971 6.931281 GGAGAATAGTGCAGATATGTTGCTAA 59.069 38.462 9.49 0.00 42.02 3.09
8604 8972 7.442364 GGAGAATAGTGCAGATATGTTGCTAAA 59.558 37.037 9.49 0.00 42.02 1.85
8605 8973 8.737168 AGAATAGTGCAGATATGTTGCTAAAA 57.263 30.769 9.49 0.00 42.02 1.52
8606 8974 8.616076 AGAATAGTGCAGATATGTTGCTAAAAC 58.384 33.333 9.49 1.38 42.02 2.43
8607 8975 8.511604 AATAGTGCAGATATGTTGCTAAAACT 57.488 30.769 9.49 7.26 42.02 2.66
8608 8976 6.428385 AGTGCAGATATGTTGCTAAAACTC 57.572 37.500 9.49 0.00 42.02 3.01
8609 8977 5.355350 AGTGCAGATATGTTGCTAAAACTCC 59.645 40.000 9.49 0.00 42.02 3.85
8610 8978 5.355350 GTGCAGATATGTTGCTAAAACTCCT 59.645 40.000 9.49 0.00 42.02 3.69
8611 8979 5.945784 TGCAGATATGTTGCTAAAACTCCTT 59.054 36.000 9.49 0.00 42.02 3.36
8612 8980 6.434028 TGCAGATATGTTGCTAAAACTCCTTT 59.566 34.615 9.49 0.00 42.02 3.11
8613 8981 7.609918 TGCAGATATGTTGCTAAAACTCCTTTA 59.390 33.333 9.49 0.00 42.02 1.85
8614 8982 8.458843 GCAGATATGTTGCTAAAACTCCTTTAA 58.541 33.333 2.33 0.00 38.51 1.52
8617 8985 9.569167 GATATGTTGCTAAAACTCCTTTAAACC 57.431 33.333 0.00 0.00 0.00 3.27
8618 8986 7.597288 ATGTTGCTAAAACTCCTTTAAACCT 57.403 32.000 0.00 0.00 0.00 3.50
8619 8987 8.700439 ATGTTGCTAAAACTCCTTTAAACCTA 57.300 30.769 0.00 0.00 0.00 3.08
8620 8988 8.522542 TGTTGCTAAAACTCCTTTAAACCTAA 57.477 30.769 0.00 0.00 0.00 2.69
8621 8989 9.138596 TGTTGCTAAAACTCCTTTAAACCTAAT 57.861 29.630 0.00 0.00 0.00 1.73
8622 8990 9.406828 GTTGCTAAAACTCCTTTAAACCTAATG 57.593 33.333 0.00 0.00 0.00 1.90
8623 8991 8.117813 TGCTAAAACTCCTTTAAACCTAATGG 57.882 34.615 0.00 0.00 34.86 3.16
8624 8992 7.945664 TGCTAAAACTCCTTTAAACCTAATGGA 59.054 33.333 0.00 0.00 38.43 3.41
8625 8993 8.799367 GCTAAAACTCCTTTAAACCTAATGGAA 58.201 33.333 0.00 0.00 39.57 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
131 133 4.730949 ATATATACACGTAAGGCCGCAT 57.269 40.909 0.00 0.00 46.39 4.73
149 151 1.065782 TGGCCTTGCGTGTGTGTATAT 60.066 47.619 3.32 0.00 0.00 0.86
154 158 2.191354 CTCATGGCCTTGCGTGTGTG 62.191 60.000 13.75 0.00 0.00 3.82
156 160 2.872557 CTCATGGCCTTGCGTGTG 59.127 61.111 13.75 0.00 0.00 3.82
170 174 0.394938 TAGGTTGCTTTGTCGGCTCA 59.605 50.000 0.00 0.00 0.00 4.26
173 177 1.335597 GGTTTAGGTTGCTTTGTCGGC 60.336 52.381 0.00 0.00 0.00 5.54
255 259 6.951062 ATTACTAGTCCGGTTTAGACTACC 57.049 41.667 17.80 0.00 42.76 3.18
406 410 6.368779 AGCTTGTTAGGTAATCTTGTGGTA 57.631 37.500 0.00 0.00 0.00 3.25
781 785 4.058124 TGACAGCAGTACAAGATGAACAC 58.942 43.478 10.05 1.30 0.00 3.32
783 787 3.433615 GGTGACAGCAGTACAAGATGAAC 59.566 47.826 10.05 7.69 0.00 3.18
996 1000 3.890756 TCTGCCATTTTATGCATACTGGG 59.109 43.478 21.84 15.49 36.79 4.45
1128 1132 6.557568 TGTTACCTTCAATATTCCACCCTTT 58.442 36.000 0.00 0.00 0.00 3.11
1230 1234 3.758554 GAGCATTTGGTGGTTACAGACAT 59.241 43.478 0.00 0.00 39.00 3.06
1245 1249 3.136763 CTGCATCATACGGAGAGCATTT 58.863 45.455 0.00 0.00 39.04 2.32
1259 1263 3.275999 CAATCTGTGTCATCCTGCATCA 58.724 45.455 0.00 0.00 0.00 3.07
1603 1769 8.564574 TGTTGTAAAGACAAGGTTGATTATGAC 58.435 33.333 0.00 0.00 46.20 3.06
1615 1781 7.017645 GTGCAGACATATGTTGTAAAGACAAG 58.982 38.462 10.30 0.00 46.20 3.16
1664 1830 6.261158 GCAAGGGGTAGTTTGATCTATTTCTC 59.739 42.308 0.00 0.00 0.00 2.87
1770 1936 3.428045 GGAGCATGTGTTCCAACTAATGC 60.428 47.826 10.56 16.11 43.82 3.56
1914 2080 4.524714 TCCAAGAAGGTTCAACAACAACAA 59.475 37.500 0.00 0.00 39.02 2.83
1915 2081 4.082845 TCCAAGAAGGTTCAACAACAACA 58.917 39.130 0.00 0.00 39.02 3.33
1916 2082 4.712122 TCCAAGAAGGTTCAACAACAAC 57.288 40.909 0.00 0.00 39.02 3.32
1917 2083 5.009610 GCTATCCAAGAAGGTTCAACAACAA 59.990 40.000 0.00 0.00 39.02 2.83
1918 2084 4.518970 GCTATCCAAGAAGGTTCAACAACA 59.481 41.667 0.00 0.00 39.02 3.33
1919 2085 4.762251 AGCTATCCAAGAAGGTTCAACAAC 59.238 41.667 0.00 0.00 39.02 3.32
1920 2086 4.985538 AGCTATCCAAGAAGGTTCAACAA 58.014 39.130 0.00 0.00 39.02 2.83
1921 2087 4.640771 AGCTATCCAAGAAGGTTCAACA 57.359 40.909 0.00 0.00 39.02 3.33
1922 2088 4.762251 ACAAGCTATCCAAGAAGGTTCAAC 59.238 41.667 0.00 0.00 39.02 3.18
1923 2089 4.985538 ACAAGCTATCCAAGAAGGTTCAA 58.014 39.130 0.00 0.00 39.02 2.69
1924 2090 4.640771 ACAAGCTATCCAAGAAGGTTCA 57.359 40.909 0.00 0.00 39.02 3.18
1925 2091 5.966742 AAACAAGCTATCCAAGAAGGTTC 57.033 39.130 0.00 0.00 39.02 3.62
1929 2095 9.774742 GTTACATTAAACAAGCTATCCAAGAAG 57.225 33.333 0.00 0.00 0.00 2.85
2197 2363 3.766591 TCTTGTGAACCTGGCAAGAAAAA 59.233 39.130 10.76 0.00 43.56 1.94
2328 2495 9.148879 ACAACCTTACTTGTAGCATAGATAGAT 57.851 33.333 0.00 0.00 32.38 1.98
2498 2665 3.904339 AGTCAAAGTCAGTGATACCAGGT 59.096 43.478 0.00 0.00 0.00 4.00
2525 2692 8.299570 ACAATGAGATCACCAAGAACAAATAAC 58.700 33.333 0.00 0.00 0.00 1.89
2528 2695 6.718454 AGACAATGAGATCACCAAGAACAAAT 59.282 34.615 0.00 0.00 0.00 2.32
2684 2851 5.808366 ACTGATGTCTGACCTGTAAGAAA 57.192 39.130 5.17 0.00 34.07 2.52
2762 2929 8.843885 AAAACAGACTACTAACATAAGGAACC 57.156 34.615 0.00 0.00 0.00 3.62
2933 3100 3.917329 TCAGTACGAGACTTTGACCAG 57.083 47.619 0.00 0.00 35.64 4.00
2934 3101 3.887110 TCTTCAGTACGAGACTTTGACCA 59.113 43.478 0.00 0.00 35.64 4.02
2935 3102 4.228317 GTCTTCAGTACGAGACTTTGACC 58.772 47.826 15.43 0.00 35.64 4.02
2947 3115 6.920569 TTGAAGTTTTCTGGTCTTCAGTAC 57.079 37.500 0.00 0.00 44.95 2.73
3135 3303 3.006430 TGCACTCGGATCAAGAACACTTA 59.994 43.478 0.00 0.00 0.00 2.24
3144 3312 1.953559 GCCTTATGCACTCGGATCAA 58.046 50.000 0.00 0.00 40.77 2.57
3305 3473 7.778382 TGCCTAGGATCCTTTTTACCTAAAATC 59.222 37.037 22.03 0.00 35.29 2.17
3356 3524 7.159372 GGATCGTAAATCTTGCTTTAGGGATA 58.841 38.462 0.00 0.00 30.94 2.59
3433 3601 2.739292 TGTCGACTTGTTCAGCAGTAC 58.261 47.619 17.92 0.00 0.00 2.73
3675 3843 8.412456 CAGAGATATCTCAAGTAGTGTGTTCAT 58.588 37.037 29.83 5.05 45.21 2.57
3795 3963 3.843619 CCTTCTCTCCTTCCCTTCTTCTT 59.156 47.826 0.00 0.00 0.00 2.52
3796 3964 3.449918 CCTTCTCTCCTTCCCTTCTTCT 58.550 50.000 0.00 0.00 0.00 2.85
3797 3965 2.503765 CCCTTCTCTCCTTCCCTTCTTC 59.496 54.545 0.00 0.00 0.00 2.87
3913 4088 1.933051 TCTTCTCCTCTCCTGGATCCA 59.067 52.381 15.27 15.27 35.30 3.41
4140 4324 1.143684 GAGGGGATAAATGAGCCTGCA 59.856 52.381 0.00 0.00 32.46 4.41
4150 4334 3.526019 ACTCGAATTTGGGAGGGGATAAA 59.474 43.478 0.00 0.00 34.58 1.40
4222 4406 2.718747 TTTCGTGTCGGGCGGTTGAT 62.719 55.000 0.00 0.00 0.00 2.57
4225 4409 1.571215 GATTTTCGTGTCGGGCGGTT 61.571 55.000 0.00 0.00 0.00 4.44
4231 4415 2.159476 TCGACTAGGATTTTCGTGTCGG 60.159 50.000 12.25 0.00 44.65 4.79
4253 4437 7.782168 ACTGATCTAGGAGTCTCAATGTCATTA 59.218 37.037 1.47 0.00 0.00 1.90
4322 4506 6.716934 TTAGTTTCAACATTAGGGCAACAA 57.283 33.333 0.00 0.00 39.74 2.83
4323 4507 6.716934 TTTAGTTTCAACATTAGGGCAACA 57.283 33.333 0.00 0.00 39.74 3.33
4324 4508 6.645003 CCTTTTAGTTTCAACATTAGGGCAAC 59.355 38.462 0.00 0.00 0.00 4.17
4334 4518 9.575783 GTACAAATGTTCCTTTTAGTTTCAACA 57.424 29.630 0.00 0.00 0.00 3.33
4518 4702 3.815401 CACACAAAGGAGAACAGGTAAGG 59.185 47.826 0.00 0.00 0.00 2.69
4578 4762 6.754675 GCAACCTAATTTATGTGCGGTTAATT 59.245 34.615 0.00 0.00 33.73 1.40
4663 4847 8.464770 TTTCAAAAGTCAAACTTCATGAACTG 57.535 30.769 3.38 2.75 40.47 3.16
4946 5293 2.357009 CCTGCAAGTAAGCCATGTGATC 59.643 50.000 0.00 0.00 0.00 2.92
5106 5459 5.485620 GAACGGAGGGAGTACAAAACTATT 58.514 41.667 0.00 0.00 39.07 1.73
5208 5561 6.127563 TGACTACATACGGAGCAAAATGAGTA 60.128 38.462 0.00 0.00 0.00 2.59
5984 6337 9.717942 GATATATGGCACTTCAGAGAATAAACT 57.282 33.333 0.00 0.00 0.00 2.66
6448 6804 6.852664 TGTCAAGGAAAAGAGAACAAAAGAC 58.147 36.000 0.00 0.00 0.00 3.01
6469 6826 3.186909 GTTCCACAAAGGCAAGTTTGTC 58.813 45.455 7.81 0.00 45.53 3.18
6624 6981 5.305585 AGTTTTAGTTTCAGCTCATCCGAA 58.694 37.500 0.00 0.00 0.00 4.30
6804 7161 5.571784 TCGTTACCTCGATATTCTGTGTT 57.428 39.130 0.00 0.00 34.85 3.32
6805 7162 5.067413 ACATCGTTACCTCGATATTCTGTGT 59.933 40.000 1.43 0.00 46.64 3.72
7036 7393 2.673043 GCCTTTGTCAATGTCCATGCTG 60.673 50.000 0.00 0.00 0.00 4.41
7150 7509 7.482474 TGCACATATCAAAAATATGGACACTG 58.518 34.615 9.23 1.03 36.56 3.66
7330 7689 5.422666 TTGTGTGTCAAGACAGCAATTAG 57.577 39.130 2.62 0.00 42.74 1.73
7968 8328 4.341502 CAAAAGCCACGTGCCCCG 62.342 66.667 10.91 0.00 42.71 5.73
8030 8390 3.611113 GCTTTACAGTTTCATAGCGACGA 59.389 43.478 0.00 0.00 0.00 4.20
8051 8411 2.109126 CCTAAGCCAGCGACCAAGC 61.109 63.158 0.00 0.00 37.41 4.01
8052 8412 0.036388 TTCCTAAGCCAGCGACCAAG 60.036 55.000 0.00 0.00 0.00 3.61
8247 8615 3.244345 CACTTCTCGTTTTCACGCTAACA 59.756 43.478 0.00 0.00 46.70 2.41
8248 8616 3.488310 TCACTTCTCGTTTTCACGCTAAC 59.512 43.478 0.00 0.00 46.70 2.34
8249 8617 3.708890 TCACTTCTCGTTTTCACGCTAA 58.291 40.909 0.00 0.00 46.70 3.09
8250 8618 3.358707 TCACTTCTCGTTTTCACGCTA 57.641 42.857 0.00 0.00 46.70 4.26
8251 8619 2.218953 TCACTTCTCGTTTTCACGCT 57.781 45.000 0.00 0.00 46.70 5.07
8252 8620 3.059868 TCAATCACTTCTCGTTTTCACGC 60.060 43.478 0.00 0.00 46.70 5.34
8254 8622 6.658831 TCAATCAATCACTTCTCGTTTTCAC 58.341 36.000 0.00 0.00 0.00 3.18
8255 8623 6.859420 TCAATCAATCACTTCTCGTTTTCA 57.141 33.333 0.00 0.00 0.00 2.69
8256 8624 8.017373 TCATTCAATCAATCACTTCTCGTTTTC 58.983 33.333 0.00 0.00 0.00 2.29
8257 8625 7.874940 TCATTCAATCAATCACTTCTCGTTTT 58.125 30.769 0.00 0.00 0.00 2.43
8258 8626 7.439157 TCATTCAATCAATCACTTCTCGTTT 57.561 32.000 0.00 0.00 0.00 3.60
8259 8627 7.439157 TTCATTCAATCAATCACTTCTCGTT 57.561 32.000 0.00 0.00 0.00 3.85
8260 8628 7.335171 TGATTCATTCAATCAATCACTTCTCGT 59.665 33.333 0.00 0.00 46.68 4.18
8261 8629 7.691158 TGATTCATTCAATCAATCACTTCTCG 58.309 34.615 0.00 0.00 46.68 4.04
8264 8632 8.675504 AGACTGATTCATTCAATCAATCACTTC 58.324 33.333 8.13 0.00 46.14 3.01
8265 8633 8.459635 CAGACTGATTCATTCAATCAATCACTT 58.540 33.333 8.13 0.00 46.14 3.16
8266 8634 7.610692 ACAGACTGATTCATTCAATCAATCACT 59.389 33.333 10.08 0.00 46.14 3.41
8267 8635 7.759465 ACAGACTGATTCATTCAATCAATCAC 58.241 34.615 10.08 0.00 46.14 3.06
8268 8636 7.933215 ACAGACTGATTCATTCAATCAATCA 57.067 32.000 10.08 0.00 46.14 2.57
8273 8641 7.967303 GGAAAGAACAGACTGATTCATTCAATC 59.033 37.037 22.48 13.31 41.42 2.67
8274 8642 7.449395 TGGAAAGAACAGACTGATTCATTCAAT 59.551 33.333 22.48 8.10 35.33 2.57
8275 8643 6.772233 TGGAAAGAACAGACTGATTCATTCAA 59.228 34.615 22.48 15.84 35.33 2.69
8276 8644 6.298361 TGGAAAGAACAGACTGATTCATTCA 58.702 36.000 22.48 13.49 35.33 2.57
8277 8645 6.808008 TGGAAAGAACAGACTGATTCATTC 57.192 37.500 10.08 15.40 33.73 2.67
8278 8646 7.449395 TCAATGGAAAGAACAGACTGATTCATT 59.551 33.333 10.08 8.41 0.00 2.57
8279 8647 6.944290 TCAATGGAAAGAACAGACTGATTCAT 59.056 34.615 10.08 0.00 0.00 2.57
8280 8648 6.298361 TCAATGGAAAGAACAGACTGATTCA 58.702 36.000 10.08 0.00 0.00 2.57
8281 8649 6.808008 TCAATGGAAAGAACAGACTGATTC 57.192 37.500 10.08 9.24 0.00 2.52
8282 8650 6.944290 TGATCAATGGAAAGAACAGACTGATT 59.056 34.615 10.08 0.00 0.00 2.57
8283 8651 6.479006 TGATCAATGGAAAGAACAGACTGAT 58.521 36.000 10.08 0.00 0.00 2.90
8284 8652 5.868454 TGATCAATGGAAAGAACAGACTGA 58.132 37.500 10.08 0.00 0.00 3.41
8285 8653 6.564709 TTGATCAATGGAAAGAACAGACTG 57.435 37.500 3.38 0.00 0.00 3.51
8286 8654 7.309621 CCAATTGATCAATGGAAAGAACAGACT 60.310 37.037 22.30 0.00 0.00 3.24
8287 8655 6.810182 CCAATTGATCAATGGAAAGAACAGAC 59.190 38.462 22.30 0.00 0.00 3.51
8288 8656 6.071221 CCCAATTGATCAATGGAAAGAACAGA 60.071 38.462 25.90 0.00 0.00 3.41
8289 8657 6.103997 CCCAATTGATCAATGGAAAGAACAG 58.896 40.000 25.90 10.01 0.00 3.16
8290 8658 5.543405 ACCCAATTGATCAATGGAAAGAACA 59.457 36.000 24.49 0.00 0.00 3.18
8291 8659 6.041423 ACCCAATTGATCAATGGAAAGAAC 57.959 37.500 24.49 0.00 0.00 3.01
8292 8660 7.976414 ATACCCAATTGATCAATGGAAAGAA 57.024 32.000 24.49 9.27 0.00 2.52
8293 8661 8.058235 TGTATACCCAATTGATCAATGGAAAGA 58.942 33.333 24.49 13.03 0.00 2.52
8294 8662 8.236585 TGTATACCCAATTGATCAATGGAAAG 57.763 34.615 24.49 15.25 0.00 2.62
8295 8663 8.780616 ATGTATACCCAATTGATCAATGGAAA 57.219 30.769 24.49 16.67 0.00 3.13
8296 8664 9.295825 GTATGTATACCCAATTGATCAATGGAA 57.704 33.333 24.49 16.92 0.00 3.53
8297 8665 8.443979 TGTATGTATACCCAATTGATCAATGGA 58.556 33.333 24.49 10.78 32.33 3.41
8298 8666 8.634335 TGTATGTATACCCAATTGATCAATGG 57.366 34.615 21.39 19.85 32.33 3.16
8300 8668 9.866655 ACTTGTATGTATACCCAATTGATCAAT 57.133 29.630 15.36 15.36 32.33 2.57
8302 8670 9.996554 CTACTTGTATGTATACCCAATTGATCA 57.003 33.333 7.12 0.00 32.33 2.92
8305 8673 8.647796 CCTCTACTTGTATGTATACCCAATTGA 58.352 37.037 7.12 0.00 32.33 2.57
8306 8674 7.878127 CCCTCTACTTGTATGTATACCCAATTG 59.122 40.741 0.00 0.00 32.33 2.32
8307 8675 7.017254 CCCCTCTACTTGTATGTATACCCAATT 59.983 40.741 0.00 0.00 32.33 2.32
8308 8676 6.500751 CCCCTCTACTTGTATGTATACCCAAT 59.499 42.308 0.00 0.00 32.33 3.16
8309 8677 5.842328 CCCCTCTACTTGTATGTATACCCAA 59.158 44.000 0.00 0.51 32.33 4.12
8310 8678 5.102956 ACCCCTCTACTTGTATGTATACCCA 60.103 44.000 0.00 0.00 32.33 4.51
8311 8679 5.245526 CACCCCTCTACTTGTATGTATACCC 59.754 48.000 0.00 0.00 32.33 3.69
8312 8680 5.279356 GCACCCCTCTACTTGTATGTATACC 60.279 48.000 0.00 0.00 32.33 2.73
8313 8681 5.279356 GGCACCCCTCTACTTGTATGTATAC 60.279 48.000 0.00 0.00 0.00 1.47
8314 8682 4.836736 GGCACCCCTCTACTTGTATGTATA 59.163 45.833 0.00 0.00 0.00 1.47
8315 8683 3.646637 GGCACCCCTCTACTTGTATGTAT 59.353 47.826 0.00 0.00 0.00 2.29
8316 8684 3.036091 GGCACCCCTCTACTTGTATGTA 58.964 50.000 0.00 0.00 0.00 2.29
8317 8685 1.838077 GGCACCCCTCTACTTGTATGT 59.162 52.381 0.00 0.00 0.00 2.29
8318 8686 2.119495 AGGCACCCCTCTACTTGTATG 58.881 52.381 0.00 0.00 36.46 2.39
8319 8687 2.570386 AGGCACCCCTCTACTTGTAT 57.430 50.000 0.00 0.00 36.46 2.29
8329 8697 2.297129 GCTCTCTTGAGGCACCCCT 61.297 63.158 0.00 0.00 46.74 4.79
8330 8698 2.270527 GCTCTCTTGAGGCACCCC 59.729 66.667 0.00 0.00 40.53 4.95
8331 8699 1.376553 GTGCTCTCTTGAGGCACCC 60.377 63.158 22.10 8.41 39.32 4.61
8332 8700 4.292784 GTGCTCTCTTGAGGCACC 57.707 61.111 22.10 11.73 39.32 5.01
8333 8701 1.739562 CGGTGCTCTCTTGAGGCAC 60.740 63.158 23.40 23.40 41.79 5.01
8334 8702 1.908299 TCGGTGCTCTCTTGAGGCA 60.908 57.895 8.84 8.84 40.53 4.75
8335 8703 1.446966 GTCGGTGCTCTCTTGAGGC 60.447 63.158 0.00 1.71 40.53 4.70
8336 8704 1.153939 CGTCGGTGCTCTCTTGAGG 60.154 63.158 0.00 0.00 40.53 3.86
8337 8705 0.241213 TTCGTCGGTGCTCTCTTGAG 59.759 55.000 0.00 0.00 42.96 3.02
8338 8706 0.241213 CTTCGTCGGTGCTCTCTTGA 59.759 55.000 0.00 0.00 0.00 3.02
8339 8707 0.734253 CCTTCGTCGGTGCTCTCTTG 60.734 60.000 0.00 0.00 0.00 3.02
8340 8708 0.894184 TCCTTCGTCGGTGCTCTCTT 60.894 55.000 0.00 0.00 0.00 2.85
8341 8709 0.894184 TTCCTTCGTCGGTGCTCTCT 60.894 55.000 0.00 0.00 0.00 3.10
8342 8710 0.456995 CTTCCTTCGTCGGTGCTCTC 60.457 60.000 0.00 0.00 0.00 3.20
8343 8711 0.894184 TCTTCCTTCGTCGGTGCTCT 60.894 55.000 0.00 0.00 0.00 4.09
8344 8712 0.456995 CTCTTCCTTCGTCGGTGCTC 60.457 60.000 0.00 0.00 0.00 4.26
8345 8713 1.587054 CTCTTCCTTCGTCGGTGCT 59.413 57.895 0.00 0.00 0.00 4.40
8346 8714 1.446272 CCTCTTCCTTCGTCGGTGC 60.446 63.158 0.00 0.00 0.00 5.01
8347 8715 1.446272 GCCTCTTCCTTCGTCGGTG 60.446 63.158 0.00 0.00 0.00 4.94
8348 8716 1.906824 TGCCTCTTCCTTCGTCGGT 60.907 57.895 0.00 0.00 0.00 4.69
8349 8717 1.446272 GTGCCTCTTCCTTCGTCGG 60.446 63.158 0.00 0.00 0.00 4.79
8350 8718 1.446272 GGTGCCTCTTCCTTCGTCG 60.446 63.158 0.00 0.00 0.00 5.12
8351 8719 1.079057 GGGTGCCTCTTCCTTCGTC 60.079 63.158 0.00 0.00 0.00 4.20
8352 8720 1.201429 ATGGGTGCCTCTTCCTTCGT 61.201 55.000 0.00 0.00 0.00 3.85
8353 8721 0.830648 TATGGGTGCCTCTTCCTTCG 59.169 55.000 0.00 0.00 0.00 3.79
8354 8722 1.134068 GGTATGGGTGCCTCTTCCTTC 60.134 57.143 0.00 0.00 0.00 3.46
8355 8723 0.919710 GGTATGGGTGCCTCTTCCTT 59.080 55.000 0.00 0.00 0.00 3.36
8356 8724 1.338136 CGGTATGGGTGCCTCTTCCT 61.338 60.000 0.00 0.00 0.00 3.36
8357 8725 1.146263 CGGTATGGGTGCCTCTTCC 59.854 63.158 0.00 0.00 0.00 3.46
8358 8726 1.146263 CCGGTATGGGTGCCTCTTC 59.854 63.158 0.00 0.00 0.00 2.87
8359 8727 1.306654 TCCGGTATGGGTGCCTCTT 60.307 57.895 0.00 0.00 38.76 2.85
8360 8728 2.064581 GTCCGGTATGGGTGCCTCT 61.065 63.158 0.00 0.00 38.76 3.69
8361 8729 2.363975 TGTCCGGTATGGGTGCCTC 61.364 63.158 0.00 0.00 38.76 4.70
8362 8730 2.285069 TGTCCGGTATGGGTGCCT 60.285 61.111 0.00 0.00 38.76 4.75
8363 8731 2.124860 GTGTCCGGTATGGGTGCC 60.125 66.667 0.00 0.00 38.76 5.01
8364 8732 1.449601 CTGTGTCCGGTATGGGTGC 60.450 63.158 0.00 0.00 38.76 5.01
8365 8733 1.220749 CCTGTGTCCGGTATGGGTG 59.779 63.158 0.00 0.00 38.76 4.61
8366 8734 2.666098 GCCTGTGTCCGGTATGGGT 61.666 63.158 0.00 0.00 38.76 4.51
8367 8735 2.189521 GCCTGTGTCCGGTATGGG 59.810 66.667 0.00 0.00 38.76 4.00
8368 8736 2.202878 CGCCTGTGTCCGGTATGG 60.203 66.667 0.00 0.00 40.09 2.74
8369 8737 1.518572 GACGCCTGTGTCCGGTATG 60.519 63.158 0.00 0.00 32.61 2.39
8370 8738 2.890371 GACGCCTGTGTCCGGTAT 59.110 61.111 0.00 0.00 32.61 2.73
8376 8744 1.443872 CTGTACGGACGCCTGTGTC 60.444 63.158 0.00 2.24 38.17 3.67
8377 8745 2.649034 CTGTACGGACGCCTGTGT 59.351 61.111 0.00 0.00 33.18 3.72
8378 8746 2.126071 CCTGTACGGACGCCTGTG 60.126 66.667 2.31 0.00 33.18 3.66
8379 8747 3.379445 CCCTGTACGGACGCCTGT 61.379 66.667 2.31 0.00 35.70 4.00
8380 8748 4.143333 CCCCTGTACGGACGCCTG 62.143 72.222 2.31 0.00 33.16 4.85
8381 8749 3.892104 TTCCCCTGTACGGACGCCT 62.892 63.158 2.31 0.00 33.16 5.52
8382 8750 3.366739 CTTCCCCTGTACGGACGCC 62.367 68.421 2.31 0.00 33.16 5.68
8383 8751 2.183555 CTTCCCCTGTACGGACGC 59.816 66.667 2.31 0.00 33.16 5.19
8384 8752 2.718073 CCCTTCCCCTGTACGGACG 61.718 68.421 2.31 0.00 33.16 4.79
8385 8753 0.690077 ATCCCTTCCCCTGTACGGAC 60.690 60.000 2.31 0.00 33.16 4.79
8386 8754 0.689745 CATCCCTTCCCCTGTACGGA 60.690 60.000 2.31 0.00 33.16 4.69
8387 8755 1.830145 CATCCCTTCCCCTGTACGG 59.170 63.158 0.00 0.00 0.00 4.02
8388 8756 1.146263 GCATCCCTTCCCCTGTACG 59.854 63.158 0.00 0.00 0.00 3.67
8389 8757 1.416772 GTAGCATCCCTTCCCCTGTAC 59.583 57.143 0.00 0.00 0.00 2.90
8390 8758 1.694693 GGTAGCATCCCTTCCCCTGTA 60.695 57.143 0.00 0.00 0.00 2.74
8391 8759 0.988678 GGTAGCATCCCTTCCCCTGT 60.989 60.000 0.00 0.00 0.00 4.00
8392 8760 1.709994 GGGTAGCATCCCTTCCCCTG 61.710 65.000 8.70 0.00 43.51 4.45
8393 8761 1.386057 GGGTAGCATCCCTTCCCCT 60.386 63.158 8.70 0.00 43.51 4.79
8394 8762 3.251891 GGGTAGCATCCCTTCCCC 58.748 66.667 8.70 0.00 43.51 4.81
8416 8784 2.503375 CGTACGGACGCCTGTGTC 60.503 66.667 7.51 2.24 43.21 3.67
8425 8793 1.081242 TCCAAAGCGTCGTACGGAC 60.081 57.895 16.52 11.17 42.82 4.79
8426 8794 1.081242 GTCCAAAGCGTCGTACGGA 60.081 57.895 16.52 0.00 42.82 4.69
8427 8795 0.940519 TTGTCCAAAGCGTCGTACGG 60.941 55.000 16.52 0.69 42.82 4.02
8428 8796 0.854062 TTTGTCCAAAGCGTCGTACG 59.146 50.000 9.53 9.53 45.88 3.67
8429 8797 3.531262 ATTTTGTCCAAAGCGTCGTAC 57.469 42.857 0.00 0.00 0.00 3.67
8430 8798 4.083908 GGTTATTTTGTCCAAAGCGTCGTA 60.084 41.667 0.00 0.00 0.00 3.43
8431 8799 3.304190 GGTTATTTTGTCCAAAGCGTCGT 60.304 43.478 0.00 0.00 0.00 4.34
8432 8800 3.058501 AGGTTATTTTGTCCAAAGCGTCG 60.059 43.478 0.00 0.00 0.00 5.12
8433 8801 4.499037 AGGTTATTTTGTCCAAAGCGTC 57.501 40.909 0.00 0.00 0.00 5.19
8434 8802 6.584185 AATAGGTTATTTTGTCCAAAGCGT 57.416 33.333 0.00 0.00 0.00 5.07
8435 8803 7.312899 AGAAATAGGTTATTTTGTCCAAAGCG 58.687 34.615 0.00 0.00 38.42 4.68
8440 8808 9.802039 AGTGTTAGAAATAGGTTATTTTGTCCA 57.198 29.630 0.00 0.00 38.42 4.02
8443 8811 9.239551 GGGAGTGTTAGAAATAGGTTATTTTGT 57.760 33.333 0.00 0.00 38.42 2.83
8444 8812 9.462606 AGGGAGTGTTAGAAATAGGTTATTTTG 57.537 33.333 0.00 0.00 38.42 2.44
8445 8813 9.682465 GAGGGAGTGTTAGAAATAGGTTATTTT 57.318 33.333 0.00 0.00 38.42 1.82
8446 8814 9.059023 AGAGGGAGTGTTAGAAATAGGTTATTT 57.941 33.333 0.00 0.00 40.84 1.40
8447 8815 8.625467 AGAGGGAGTGTTAGAAATAGGTTATT 57.375 34.615 0.00 0.00 0.00 1.40
8448 8816 8.487028 CAAGAGGGAGTGTTAGAAATAGGTTAT 58.513 37.037 0.00 0.00 0.00 1.89
8449 8817 7.456902 ACAAGAGGGAGTGTTAGAAATAGGTTA 59.543 37.037 0.00 0.00 0.00 2.85
8450 8818 6.272558 ACAAGAGGGAGTGTTAGAAATAGGTT 59.727 38.462 0.00 0.00 0.00 3.50
8451 8819 5.785940 ACAAGAGGGAGTGTTAGAAATAGGT 59.214 40.000 0.00 0.00 0.00 3.08
8452 8820 6.301169 ACAAGAGGGAGTGTTAGAAATAGG 57.699 41.667 0.00 0.00 0.00 2.57
8453 8821 7.837863 TGTACAAGAGGGAGTGTTAGAAATAG 58.162 38.462 0.00 0.00 0.00 1.73
8454 8822 7.786046 TGTACAAGAGGGAGTGTTAGAAATA 57.214 36.000 0.00 0.00 0.00 1.40
8455 8823 6.681729 TGTACAAGAGGGAGTGTTAGAAAT 57.318 37.500 0.00 0.00 0.00 2.17
8456 8824 6.488769 TTGTACAAGAGGGAGTGTTAGAAA 57.511 37.500 3.59 0.00 0.00 2.52
8457 8825 6.464222 CATTGTACAAGAGGGAGTGTTAGAA 58.536 40.000 14.65 0.00 0.00 2.10
8458 8826 5.568825 GCATTGTACAAGAGGGAGTGTTAGA 60.569 44.000 14.65 0.00 0.00 2.10
8459 8827 4.631813 GCATTGTACAAGAGGGAGTGTTAG 59.368 45.833 14.65 0.00 0.00 2.34
8460 8828 4.564821 GGCATTGTACAAGAGGGAGTGTTA 60.565 45.833 14.65 0.00 0.00 2.41
8461 8829 3.412386 GCATTGTACAAGAGGGAGTGTT 58.588 45.455 14.65 0.00 0.00 3.32
8462 8830 2.290323 GGCATTGTACAAGAGGGAGTGT 60.290 50.000 14.65 0.00 0.00 3.55
8463 8831 2.359900 GGCATTGTACAAGAGGGAGTG 58.640 52.381 14.65 6.59 0.00 3.51
8464 8832 1.066143 CGGCATTGTACAAGAGGGAGT 60.066 52.381 14.65 0.00 0.00 3.85
8465 8833 1.066143 ACGGCATTGTACAAGAGGGAG 60.066 52.381 14.65 5.86 0.00 4.30
8466 8834 0.981183 ACGGCATTGTACAAGAGGGA 59.019 50.000 14.65 0.00 0.00 4.20
8467 8835 1.066143 AGACGGCATTGTACAAGAGGG 60.066 52.381 14.65 6.25 0.00 4.30
8468 8836 2.386661 AGACGGCATTGTACAAGAGG 57.613 50.000 14.65 7.32 0.00 3.69
8469 8837 3.067106 ACAAGACGGCATTGTACAAGAG 58.933 45.455 14.65 10.12 39.06 2.85
8470 8838 3.120321 ACAAGACGGCATTGTACAAGA 57.880 42.857 14.65 0.00 39.06 3.02
8471 8839 5.545658 AATACAAGACGGCATTGTACAAG 57.454 39.130 14.65 7.46 43.76 3.16
8472 8840 6.167685 ACTAATACAAGACGGCATTGTACAA 58.832 36.000 11.41 11.41 43.76 2.41
8473 8841 5.726397 ACTAATACAAGACGGCATTGTACA 58.274 37.500 13.30 0.00 43.76 2.90
8474 8842 7.760131 TTACTAATACAAGACGGCATTGTAC 57.240 36.000 13.30 0.00 43.76 2.90
8475 8843 8.198778 TGATTACTAATACAAGACGGCATTGTA 58.801 33.333 13.37 13.37 44.72 2.41
8476 8844 7.045416 TGATTACTAATACAAGACGGCATTGT 58.955 34.615 10.32 10.32 43.15 2.71
8477 8845 7.477144 TGATTACTAATACAAGACGGCATTG 57.523 36.000 0.00 0.00 0.00 2.82
8478 8846 7.931407 TGATGATTACTAATACAAGACGGCATT 59.069 33.333 0.00 0.00 0.00 3.56
8479 8847 7.441836 TGATGATTACTAATACAAGACGGCAT 58.558 34.615 0.00 0.00 0.00 4.40
8480 8848 6.811954 TGATGATTACTAATACAAGACGGCA 58.188 36.000 0.00 0.00 0.00 5.69
8481 8849 7.709269 TTGATGATTACTAATACAAGACGGC 57.291 36.000 0.00 0.00 0.00 5.68
8482 8850 9.698309 AGATTGATGATTACTAATACAAGACGG 57.302 33.333 0.00 0.00 0.00 4.79
8491 8859 9.838339 ACTTTCCGAAGATTGATGATTACTAAT 57.162 29.630 0.00 0.00 36.69 1.73
8492 8860 9.314321 GACTTTCCGAAGATTGATGATTACTAA 57.686 33.333 0.00 0.00 36.69 2.24
8493 8861 7.926555 GGACTTTCCGAAGATTGATGATTACTA 59.073 37.037 0.00 0.00 36.69 1.82
8494 8862 6.763610 GGACTTTCCGAAGATTGATGATTACT 59.236 38.462 0.00 0.00 36.69 2.24
8495 8863 6.538742 TGGACTTTCCGAAGATTGATGATTAC 59.461 38.462 0.00 0.00 40.17 1.89
8496 8864 6.649155 TGGACTTTCCGAAGATTGATGATTA 58.351 36.000 0.00 0.00 40.17 1.75
8497 8865 5.500234 TGGACTTTCCGAAGATTGATGATT 58.500 37.500 0.00 0.00 40.17 2.57
8498 8866 5.102953 TGGACTTTCCGAAGATTGATGAT 57.897 39.130 0.00 0.00 40.17 2.45
8499 8867 4.551702 TGGACTTTCCGAAGATTGATGA 57.448 40.909 0.00 0.00 40.17 2.92
8500 8868 5.124457 ACATTGGACTTTCCGAAGATTGATG 59.876 40.000 0.00 0.00 40.17 3.07
8501 8869 5.256474 ACATTGGACTTTCCGAAGATTGAT 58.744 37.500 0.00 0.00 40.17 2.57
8502 8870 4.651778 ACATTGGACTTTCCGAAGATTGA 58.348 39.130 0.00 0.00 40.17 2.57
8503 8871 5.376854 AACATTGGACTTTCCGAAGATTG 57.623 39.130 0.00 0.00 40.17 2.67
8504 8872 7.703058 ATAAACATTGGACTTTCCGAAGATT 57.297 32.000 0.00 0.00 40.17 2.40
8505 8873 8.801882 TTATAAACATTGGACTTTCCGAAGAT 57.198 30.769 0.00 0.00 40.17 2.40
8506 8874 8.801882 ATTATAAACATTGGACTTTCCGAAGA 57.198 30.769 0.00 0.00 40.17 2.87
8507 8875 9.289303 CAATTATAAACATTGGACTTTCCGAAG 57.711 33.333 0.00 0.00 40.17 3.79
8508 8876 9.015367 TCAATTATAAACATTGGACTTTCCGAA 57.985 29.630 0.00 0.00 40.17 4.30
8509 8877 8.568676 TCAATTATAAACATTGGACTTTCCGA 57.431 30.769 0.00 0.00 40.17 4.55
8534 8902 9.628500 GGTTTTTGGAGGAGTTATACAAGATAT 57.372 33.333 0.00 0.00 0.00 1.63
8535 8903 8.050930 GGGTTTTTGGAGGAGTTATACAAGATA 58.949 37.037 0.00 0.00 0.00 1.98
8536 8904 6.890268 GGGTTTTTGGAGGAGTTATACAAGAT 59.110 38.462 0.00 0.00 0.00 2.40
8537 8905 6.045106 AGGGTTTTTGGAGGAGTTATACAAGA 59.955 38.462 0.00 0.00 0.00 3.02
8538 8906 6.151144 CAGGGTTTTTGGAGGAGTTATACAAG 59.849 42.308 0.00 0.00 0.00 3.16
8539 8907 6.007703 CAGGGTTTTTGGAGGAGTTATACAA 58.992 40.000 0.00 0.00 0.00 2.41
8540 8908 5.073965 ACAGGGTTTTTGGAGGAGTTATACA 59.926 40.000 0.00 0.00 0.00 2.29
8541 8909 5.414765 CACAGGGTTTTTGGAGGAGTTATAC 59.585 44.000 0.00 0.00 0.00 1.47
8542 8910 5.515886 CCACAGGGTTTTTGGAGGAGTTATA 60.516 44.000 0.00 0.00 31.39 0.98
8543 8911 4.407365 CACAGGGTTTTTGGAGGAGTTAT 58.593 43.478 0.00 0.00 0.00 1.89
8544 8912 3.435890 CCACAGGGTTTTTGGAGGAGTTA 60.436 47.826 0.00 0.00 31.39 2.24
8545 8913 2.666317 CACAGGGTTTTTGGAGGAGTT 58.334 47.619 0.00 0.00 0.00 3.01
8546 8914 1.133482 CCACAGGGTTTTTGGAGGAGT 60.133 52.381 0.00 0.00 31.39 3.85
8547 8915 1.144913 TCCACAGGGTTTTTGGAGGAG 59.855 52.381 0.00 0.00 34.35 3.69
8548 8916 1.227249 TCCACAGGGTTTTTGGAGGA 58.773 50.000 0.00 0.00 34.35 3.71
8549 8917 2.080654 TTCCACAGGGTTTTTGGAGG 57.919 50.000 0.00 0.00 40.54 4.30
8550 8918 4.479786 TTTTTCCACAGGGTTTTTGGAG 57.520 40.909 0.00 0.00 40.54 3.86
8570 8938 9.887629 CATATCTGCACTATTCTCCTCATATTT 57.112 33.333 0.00 0.00 0.00 1.40
8571 8939 9.044646 ACATATCTGCACTATTCTCCTCATATT 57.955 33.333 0.00 0.00 0.00 1.28
8572 8940 8.606754 ACATATCTGCACTATTCTCCTCATAT 57.393 34.615 0.00 0.00 0.00 1.78
8573 8941 8.309656 CAACATATCTGCACTATTCTCCTCATA 58.690 37.037 0.00 0.00 0.00 2.15
8574 8942 6.931790 ACATATCTGCACTATTCTCCTCAT 57.068 37.500 0.00 0.00 0.00 2.90
8575 8943 6.519382 CAACATATCTGCACTATTCTCCTCA 58.481 40.000 0.00 0.00 0.00 3.86
8576 8944 5.407995 GCAACATATCTGCACTATTCTCCTC 59.592 44.000 2.09 0.00 39.69 3.71
8577 8945 5.071519 AGCAACATATCTGCACTATTCTCCT 59.928 40.000 8.62 0.00 42.48 3.69
8578 8946 5.303971 AGCAACATATCTGCACTATTCTCC 58.696 41.667 8.62 0.00 42.48 3.71
8579 8947 7.953158 TTAGCAACATATCTGCACTATTCTC 57.047 36.000 8.62 0.00 42.48 2.87
8580 8948 8.616076 GTTTTAGCAACATATCTGCACTATTCT 58.384 33.333 8.62 0.00 42.48 2.40
8581 8949 8.616076 AGTTTTAGCAACATATCTGCACTATTC 58.384 33.333 8.62 0.00 42.48 1.75
8582 8950 8.511604 AGTTTTAGCAACATATCTGCACTATT 57.488 30.769 8.62 0.00 42.48 1.73
8583 8951 7.227512 GGAGTTTTAGCAACATATCTGCACTAT 59.772 37.037 8.62 0.00 42.48 2.12
8584 8952 6.538742 GGAGTTTTAGCAACATATCTGCACTA 59.461 38.462 8.62 0.00 42.48 2.74
8585 8953 5.355350 GGAGTTTTAGCAACATATCTGCACT 59.645 40.000 8.62 3.76 42.48 4.40
8586 8954 5.355350 AGGAGTTTTAGCAACATATCTGCAC 59.645 40.000 8.62 0.00 42.48 4.57
8587 8955 5.500234 AGGAGTTTTAGCAACATATCTGCA 58.500 37.500 8.62 0.00 42.48 4.41
8588 8956 6.442513 AAGGAGTTTTAGCAACATATCTGC 57.557 37.500 0.00 0.00 40.24 4.26
8591 8959 9.569167 GGTTTAAAGGAGTTTTAGCAACATATC 57.431 33.333 0.00 0.00 33.03 1.63
8592 8960 9.309224 AGGTTTAAAGGAGTTTTAGCAACATAT 57.691 29.630 0.00 0.00 33.03 1.78
8593 8961 8.700439 AGGTTTAAAGGAGTTTTAGCAACATA 57.300 30.769 0.00 0.00 33.03 2.29
8594 8962 7.597288 AGGTTTAAAGGAGTTTTAGCAACAT 57.403 32.000 0.00 0.00 33.03 2.71
8595 8963 8.522542 TTAGGTTTAAAGGAGTTTTAGCAACA 57.477 30.769 0.00 0.00 33.03 3.33
8596 8964 9.406828 CATTAGGTTTAAAGGAGTTTTAGCAAC 57.593 33.333 0.00 0.00 33.03 4.17
8597 8965 8.581578 CCATTAGGTTTAAAGGAGTTTTAGCAA 58.418 33.333 0.00 0.00 33.03 3.91
8598 8966 7.945664 TCCATTAGGTTTAAAGGAGTTTTAGCA 59.054 33.333 0.00 0.00 33.05 3.49
8599 8967 8.344446 TCCATTAGGTTTAAAGGAGTTTTAGC 57.656 34.615 0.00 0.00 33.05 3.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.