Multiple sequence alignment - TraesCS3A01G200300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G200300 chr3A 100.000 3168 0 0 1 3168 330697172 330700339 0.000000e+00 5851.0
1 TraesCS3A01G200300 chr3A 91.509 106 7 2 1058 1162 476385274 476385378 9.160000e-31 145.0
2 TraesCS3A01G200300 chr3B 92.244 2411 101 43 1 2378 304276389 304278746 0.000000e+00 3338.0
3 TraesCS3A01G200300 chr3B 88.953 172 12 4 2578 2742 655849414 655849585 4.140000e-49 206.0
4 TraesCS3A01G200300 chr3B 93.814 97 6 0 2740 2836 304278835 304278931 2.550000e-31 147.0
5 TraesCS3A01G200300 chr3B 91.509 106 7 2 1058 1162 458342907 458343011 9.160000e-31 145.0
6 TraesCS3A01G200300 chr3B 83.230 161 20 4 2994 3147 304314592 304314752 1.180000e-29 141.0
7 TraesCS3A01G200300 chr3B 96.341 82 3 0 2506 2587 304278757 304278838 5.510000e-28 135.0
8 TraesCS3A01G200300 chr3B 84.821 112 17 0 2879 2990 166564359 166564248 2.580000e-21 113.0
9 TraesCS3A01G200300 chr3D 94.233 1734 41 27 720 2412 253340895 253339180 0.000000e+00 2593.0
10 TraesCS3A01G200300 chr3D 90.536 317 29 1 1 316 253383927 253383611 4.890000e-113 418.0
11 TraesCS3A01G200300 chr3D 96.748 246 8 0 302 547 253349319 253349074 8.180000e-111 411.0
12 TraesCS3A01G200300 chr3D 98.013 151 3 0 546 696 253341026 253340876 2.420000e-66 263.0
13 TraesCS3A01G200300 chr3D 93.750 160 10 0 2988 3147 253338959 253338800 1.140000e-59 241.0
14 TraesCS3A01G200300 chr3D 96.350 137 5 0 2740 2876 253339092 253338956 3.180000e-55 226.0
15 TraesCS3A01G200300 chr3D 90.625 160 8 4 2590 2742 2113414 2113255 4.140000e-49 206.0
16 TraesCS3A01G200300 chr3D 88.024 167 13 4 2584 2743 610353553 610353387 1.160000e-44 191.0
17 TraesCS3A01G200300 chr3D 90.517 116 7 4 2401 2515 12881752 12881640 1.970000e-32 150.0
18 TraesCS3A01G200300 chr3D 94.792 96 2 2 2493 2587 253339182 253339089 2.550000e-31 147.0
19 TraesCS3A01G200300 chr3D 91.509 106 7 2 1058 1162 357141273 357141377 9.160000e-31 145.0
20 TraesCS3A01G200300 chr3D 85.470 117 17 0 2874 2990 594819 594703 4.290000e-24 122.0
21 TraesCS3A01G200300 chr2A 88.764 178 13 4 2574 2744 746756979 746757156 8.900000e-51 211.0
22 TraesCS3A01G200300 chr2A 82.946 129 18 4 1547 1673 265274751 265274625 2.580000e-21 113.0
23 TraesCS3A01G200300 chr7D 90.741 162 8 4 2588 2742 205230643 205230482 3.200000e-50 209.0
24 TraesCS3A01G200300 chr7D 90.566 106 10 0 2885 2990 582755921 582756026 1.180000e-29 141.0
25 TraesCS3A01G200300 chr7D 81.102 127 20 4 1266 1390 135357586 135357710 7.230000e-17 99.0
26 TraesCS3A01G200300 chr7D 84.884 86 13 0 2871 2956 26566991 26566906 1.570000e-13 87.9
27 TraesCS3A01G200300 chr7D 94.444 36 2 0 2956 2991 553592447 553592482 4.410000e-04 56.5
28 TraesCS3A01G200300 chr5A 89.881 168 10 4 2582 2742 690414012 690414179 3.200000e-50 209.0
29 TraesCS3A01G200300 chr5A 90.244 164 9 4 2588 2744 456897899 456897736 1.150000e-49 207.0
30 TraesCS3A01G200300 chr5A 95.000 100 4 1 2396 2495 608605122 608605220 4.230000e-34 156.0
31 TraesCS3A01G200300 chr4B 88.571 175 12 5 2577 2743 507361950 507362124 4.140000e-49 206.0
32 TraesCS3A01G200300 chr4B 84.615 117 18 0 2874 2990 653311345 653311461 2.000000e-22 117.0
33 TraesCS3A01G200300 chr4B 85.075 67 9 1 2874 2940 169345629 169345694 2.040000e-07 67.6
34 TraesCS3A01G200300 chr2D 89.349 169 11 4 2582 2743 516708309 516708477 4.140000e-49 206.0
35 TraesCS3A01G200300 chr2D 87.356 174 14 5 2575 2741 475088511 475088339 3.220000e-45 193.0
36 TraesCS3A01G200300 chr2D 87.850 107 13 0 2885 2991 82103242 82103136 3.320000e-25 126.0
37 TraesCS3A01G200300 chr2D 82.946 129 18 4 1547 1673 211199129 211199255 2.580000e-21 113.0
38 TraesCS3A01G200300 chr2D 76.562 128 18 9 2874 2990 224922095 224922221 3.410000e-05 60.2
39 TraesCS3A01G200300 chr5B 88.068 176 14 4 2575 2743 427931376 427931201 5.360000e-48 202.0
40 TraesCS3A01G200300 chr2B 87.571 177 14 5 2573 2742 594833864 594834039 6.930000e-47 198.0
41 TraesCS3A01G200300 chr2B 82.946 129 18 4 1547 1673 266962066 266961940 2.580000e-21 113.0
42 TraesCS3A01G200300 chr2B 85.849 106 15 0 2885 2990 615437207 615437312 2.580000e-21 113.0
43 TraesCS3A01G200300 chr1B 87.151 179 14 6 2572 2743 578093695 578093519 8.970000e-46 195.0
44 TraesCS3A01G200300 chr1B 98.958 96 0 1 2410 2504 234252589 234252684 1.510000e-38 171.0
45 TraesCS3A01G200300 chr1B 89.908 109 11 0 1053 1161 615581770 615581878 1.180000e-29 141.0
46 TraesCS3A01G200300 chr1B 88.991 109 12 0 1053 1161 615625657 615625765 5.510000e-28 135.0
47 TraesCS3A01G200300 chr1B 80.682 88 15 1 2874 2959 573071563 573071650 2.040000e-07 67.6
48 TraesCS3A01G200300 chr7B 87.006 177 16 4 2573 2742 586306581 586306757 3.220000e-45 193.0
49 TraesCS3A01G200300 chr7B 87.006 177 14 6 2573 2742 551954751 551954925 1.160000e-44 191.0
50 TraesCS3A01G200300 chr7B 81.102 127 20 4 1266 1390 97192395 97192519 7.230000e-17 99.0
51 TraesCS3A01G200300 chr7B 94.915 59 3 0 1573 1631 375191244 375191302 3.360000e-15 93.5
52 TraesCS3A01G200300 chr4A 93.269 104 7 0 2399 2502 609073810 609073913 1.520000e-33 154.0
53 TraesCS3A01G200300 chr4A 86.777 121 16 0 2874 2994 637852954 637852834 5.510000e-28 135.0
54 TraesCS3A01G200300 chr6D 92.593 108 5 3 2402 2508 10798583 10798688 5.470000e-33 152.0
55 TraesCS3A01G200300 chr6D 80.682 88 17 0 1547 1634 408945988 408946075 5.670000e-08 69.4
56 TraesCS3A01G200300 chr5D 89.744 117 10 2 2411 2526 21789199 21789084 7.080000e-32 148.0
57 TraesCS3A01G200300 chr5D 93.182 44 3 0 1058 1101 130188030 130188073 7.330000e-07 65.8
58 TraesCS3A01G200300 chrUn 88.800 125 7 7 2411 2529 332204434 332204557 2.550000e-31 147.0
59 TraesCS3A01G200300 chrUn 89.344 122 6 7 2414 2529 332213805 332213685 2.550000e-31 147.0
60 TraesCS3A01G200300 chrUn 88.800 125 7 7 2411 2529 373754887 373755010 2.550000e-31 147.0
61 TraesCS3A01G200300 chrUn 87.013 77 9 1 2914 2990 358791281 358791356 5.630000e-13 86.1
62 TraesCS3A01G200300 chrUn 87.013 77 9 1 2914 2990 375561732 375561807 5.630000e-13 86.1
63 TraesCS3A01G200300 chrUn 86.250 80 10 1 2914 2993 376236534 376236456 5.630000e-13 86.1
64 TraesCS3A01G200300 chr1A 90.826 109 10 0 1053 1161 544748330 544748438 2.550000e-31 147.0
65 TraesCS3A01G200300 chr1A 85.593 118 17 0 2874 2991 184054920 184055037 1.190000e-24 124.0
66 TraesCS3A01G200300 chr1D 89.908 109 11 0 1053 1161 449846879 449846987 1.180000e-29 141.0
67 TraesCS3A01G200300 chr1D 88.073 109 13 0 1053 1161 449752670 449752778 2.560000e-26 130.0
68 TraesCS3A01G200300 chr1D 76.471 119 24 4 2874 2990 426579896 426580012 9.490000e-06 62.1
69 TraesCS3A01G200300 chr6B 86.325 117 16 0 2874 2990 575405263 575405379 9.220000e-26 128.0
70 TraesCS3A01G200300 chr6B 89.157 83 8 1 2913 2995 715971745 715971826 5.590000e-18 102.0
71 TraesCS3A01G200300 chr6B 82.203 118 19 2 2874 2990 671001145 671001029 2.010000e-17 100.0
72 TraesCS3A01G200300 chr6B 80.682 88 17 0 1547 1634 613610602 613610689 5.670000e-08 69.4
73 TraesCS3A01G200300 chr6A 85.470 117 17 0 2874 2990 94378241 94378125 4.290000e-24 122.0
74 TraesCS3A01G200300 chr7A 80.315 127 21 4 1266 1390 134491469 134491593 3.360000e-15 93.5
75 TraesCS3A01G200300 chr7A 94.915 59 3 0 1573 1631 428810802 428810860 3.360000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G200300 chr3A 330697172 330700339 3167 False 5851.000000 5851 100.0000 1 3168 1 chr3A.!!$F1 3167
1 TraesCS3A01G200300 chr3B 304276389 304278931 2542 False 1206.666667 3338 94.1330 1 2836 3 chr3B.!!$F4 2835
2 TraesCS3A01G200300 chr3D 253338800 253341026 2226 True 694.000000 2593 95.4276 546 3147 5 chr3D.!!$R7 2601

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
148 150 0.179134 GTTCGCCAGATAGTGCTCGT 60.179 55.0 0.0 0.0 0.00 4.18 F
573 575 0.618458 TTCCCCGCAACTCAAGCTAT 59.382 50.0 0.0 0.0 0.00 2.97 F
1208 1215 0.839277 TGCCCATGCTGCTATGTACT 59.161 50.0 0.0 0.0 38.71 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1705 1712 0.036952 GGACTAGCTGCTTGCACTCA 60.037 55.0 7.79 0.0 45.94 3.41 R
1833 1849 0.475906 GGAATAGGAGCCCTGCATGT 59.524 55.0 4.16 0.0 34.61 3.21 R
2973 3020 0.037303 ACGTACTTCCTCCGTCCAGA 59.963 55.0 0.00 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 1.465794 GAGAGTTCTACTGGCCTCGT 58.534 55.000 3.32 3.60 0.00 4.18
37 38 1.819903 GAGAGTTCTACTGGCCTCGTT 59.180 52.381 3.32 0.00 0.00 3.85
48 49 2.359967 GCCTCGTTGCTACCCTCCT 61.360 63.158 0.00 0.00 0.00 3.69
49 50 1.517832 CCTCGTTGCTACCCTCCTG 59.482 63.158 0.00 0.00 0.00 3.86
106 108 2.695666 CCTCGTGTCATCCAATAGAGGT 59.304 50.000 0.79 0.00 37.03 3.85
108 110 2.430694 TCGTGTCATCCAATAGAGGTGG 59.569 50.000 0.00 0.00 37.51 4.61
109 111 2.565841 GTGTCATCCAATAGAGGTGGC 58.434 52.381 0.00 0.00 35.99 5.01
110 112 1.138859 TGTCATCCAATAGAGGTGGCG 59.861 52.381 0.00 0.00 35.99 5.69
112 114 1.069765 ATCCAATAGAGGTGGCGCG 59.930 57.895 0.00 0.00 35.99 6.86
113 115 2.383245 ATCCAATAGAGGTGGCGCGG 62.383 60.000 8.83 0.00 35.99 6.46
114 116 3.272334 CAATAGAGGTGGCGCGGC 61.272 66.667 27.61 27.61 0.00 6.53
134 136 1.729881 GCTGGGATGGATTGTTCGC 59.270 57.895 0.00 0.00 0.00 4.70
136 138 0.394216 CTGGGATGGATTGTTCGCCA 60.394 55.000 0.00 0.00 38.78 5.69
148 150 0.179134 GTTCGCCAGATAGTGCTCGT 60.179 55.000 0.00 0.00 0.00 4.18
165 167 2.360801 CTCGTTGGTGAAAATGTTGGGT 59.639 45.455 0.00 0.00 0.00 4.51
167 169 2.099921 CGTTGGTGAAAATGTTGGGTCA 59.900 45.455 0.00 0.00 0.00 4.02
176 178 7.433680 GTGAAAATGTTGGGTCAGAAACTAAT 58.566 34.615 0.00 0.00 0.00 1.73
193 195 9.605275 AGAAACTAATCGAGAAATGATGAATGA 57.395 29.630 0.00 0.00 0.00 2.57
248 250 6.212955 CAACTAGACTCTAGGCTTTGCTATC 58.787 44.000 16.10 0.00 0.00 2.08
260 262 3.557290 GCTATCCCGGTCCACCCC 61.557 72.222 0.00 0.00 0.00 4.95
268 270 3.413300 GGTCCACCCCGGCCATAA 61.413 66.667 2.24 0.00 32.75 1.90
294 296 1.986575 GCTCCAAGATTGCAGGCGAC 61.987 60.000 0.00 0.00 0.00 5.19
301 303 4.100529 CAAGATTGCAGGCGACATTAAAG 58.899 43.478 0.00 0.00 0.00 1.85
305 307 1.804151 TGCAGGCGACATTAAAGACAC 59.196 47.619 0.00 0.00 0.00 3.67
306 308 1.804151 GCAGGCGACATTAAAGACACA 59.196 47.619 0.00 0.00 0.00 3.72
342 344 9.665719 ACATGTACAATAATCAGTGTGACATAA 57.334 29.630 0.00 0.00 34.25 1.90
370 372 4.819105 ACTAACCATGTCGGAGAATTGA 57.181 40.909 0.00 0.00 39.69 2.57
458 460 7.863375 CCTTTATACAGTACACTAGACAGATGC 59.137 40.741 0.00 0.00 0.00 3.91
470 472 0.740868 ACAGATGCCAACGACGATGG 60.741 55.000 18.99 18.99 41.08 3.51
573 575 0.618458 TTCCCCGCAACTCAAGCTAT 59.382 50.000 0.00 0.00 0.00 2.97
676 678 2.554370 TTACTATATGTTGCCCCCGC 57.446 50.000 0.00 0.00 0.00 6.13
699 701 4.653341 CCTTCTCTCTCTCTCTCTCTCTCT 59.347 50.000 0.00 0.00 0.00 3.10
701 703 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
703 705 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
705 707 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
707 709 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
709 711 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
711 713 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
713 715 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
715 717 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
717 719 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
719 721 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
720 722 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
721 723 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
722 724 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
723 725 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
724 726 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
725 727 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
726 728 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
727 729 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
728 730 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
729 731 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
730 732 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
731 733 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
732 734 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
733 735 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
734 736 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
735 737 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
736 738 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
737 739 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
738 740 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
739 741 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
740 742 5.523588 TCTCTCTCTCTCTCTCTCTCTCTT 58.476 45.833 0.00 0.00 0.00 2.85
741 743 5.362143 TCTCTCTCTCTCTCTCTCTCTCTTG 59.638 48.000 0.00 0.00 0.00 3.02
880 882 2.477825 CTTCTGTCTGTCTGTGTGTGG 58.522 52.381 0.00 0.00 0.00 4.17
1206 1213 5.130809 TCATATATGCCCATGCTGCTATGTA 59.869 40.000 7.92 3.35 38.71 2.29
1207 1214 1.901591 ATGCCCATGCTGCTATGTAC 58.098 50.000 0.00 0.00 38.71 2.90
1208 1215 0.839277 TGCCCATGCTGCTATGTACT 59.161 50.000 0.00 0.00 38.71 2.73
1273 1280 0.987294 CAGGGTTGGAGAGATGTGGT 59.013 55.000 0.00 0.00 0.00 4.16
1463 1470 4.930405 GGAACTTGAGAAGCAGGTAAGTAC 59.070 45.833 0.00 0.00 35.52 2.73
1464 1471 4.175787 ACTTGAGAAGCAGGTAAGTACG 57.824 45.455 0.00 0.00 34.71 3.67
1470 1477 4.077822 AGAAGCAGGTAAGTACGTACAGT 58.922 43.478 26.55 16.32 0.00 3.55
1472 1479 5.353678 AGAAGCAGGTAAGTACGTACAGTAG 59.646 44.000 26.55 12.30 35.72 2.57
1473 1480 4.583871 AGCAGGTAAGTACGTACAGTAGT 58.416 43.478 26.55 3.46 40.54 2.73
1474 1481 5.734720 AGCAGGTAAGTACGTACAGTAGTA 58.265 41.667 26.55 8.40 37.98 1.82
1475 1482 6.352516 AGCAGGTAAGTACGTACAGTAGTAT 58.647 40.000 26.55 1.93 37.98 2.12
1476 1483 7.500992 AGCAGGTAAGTACGTACAGTAGTATA 58.499 38.462 26.55 6.09 37.98 1.47
1477 1484 8.153550 AGCAGGTAAGTACGTACAGTAGTATAT 58.846 37.037 26.55 0.40 37.98 0.86
1478 1485 9.424319 GCAGGTAAGTACGTACAGTAGTATATA 57.576 37.037 26.55 3.92 37.98 0.86
1488 1495 7.272299 ACGTACAGTAGTATATAGACGACGATG 59.728 40.741 0.00 2.73 31.84 3.84
1801 1817 1.153745 GGTCGACTGCAGCTTCGAT 60.154 57.895 26.14 2.33 45.43 3.59
1833 1849 0.753479 ACAAACGTCCCCACAATGCA 60.753 50.000 0.00 0.00 0.00 3.96
1849 1865 1.150081 GCACATGCAGGGCTCCTAT 59.850 57.895 2.31 0.00 45.63 2.57
1862 1878 2.633488 GCTCCTATTCCTTGTGTGACC 58.367 52.381 0.00 0.00 0.00 4.02
1868 1902 1.978455 TTCCTTGTGTGACCACGCCT 61.978 55.000 10.72 0.00 44.92 5.52
1877 1911 2.599578 ACCACGCCTCCACGTACT 60.600 61.111 0.00 0.00 46.34 2.73
2243 2289 7.321153 ACTCACACATATACAAACCTCACTAC 58.679 38.462 0.00 0.00 0.00 2.73
2267 2313 4.720773 ACCACCTGATGAGATGAGAAGATT 59.279 41.667 0.00 0.00 0.00 2.40
2276 2322 3.726607 AGATGAGAAGATTGATCACCGC 58.273 45.455 0.00 0.00 0.00 5.68
2285 2331 0.532573 TTGATCACCGCTGAGAGGAC 59.467 55.000 9.85 0.00 0.00 3.85
2312 2358 5.313280 TGGTTTGACCACACCTATACTTT 57.687 39.130 6.85 0.00 44.79 2.66
2347 2394 4.692625 TCATTTTTCTCTCTCTGCCTTTCG 59.307 41.667 0.00 0.00 0.00 3.46
2352 2399 0.251832 TCTCTCTGCCTTTCGACCCT 60.252 55.000 0.00 0.00 0.00 4.34
2379 2426 7.673180 TCCCTCGAAAAAGAAGTACTTATTCA 58.327 34.615 15.45 5.79 37.93 2.57
2381 2428 8.228464 CCCTCGAAAAAGAAGTACTTATTCAAC 58.772 37.037 15.45 8.89 37.93 3.18
2393 2440 8.597662 AGTACTTATTCAACGAAGCTGTTTAA 57.402 30.769 0.00 0.00 0.00 1.52
2418 2465 9.574516 AATTAATGAATACAATGGTACTCCCTC 57.425 33.333 0.00 0.00 30.94 4.30
2419 2466 6.831664 AATGAATACAATGGTACTCCCTCT 57.168 37.500 0.00 0.00 30.94 3.69
2420 2467 5.614324 TGAATACAATGGTACTCCCTCTG 57.386 43.478 0.00 0.00 30.94 3.35
2421 2468 5.030147 TGAATACAATGGTACTCCCTCTGT 58.970 41.667 0.00 0.00 34.40 3.41
2422 2469 6.199376 TGAATACAATGGTACTCCCTCTGTA 58.801 40.000 0.00 0.00 36.23 2.74
2423 2470 6.670464 TGAATACAATGGTACTCCCTCTGTAA 59.330 38.462 0.00 0.00 35.75 2.41
2424 2471 7.181305 TGAATACAATGGTACTCCCTCTGTAAA 59.819 37.037 0.00 0.00 35.75 2.01
2425 2472 5.161943 ACAATGGTACTCCCTCTGTAAAC 57.838 43.478 0.00 0.00 29.95 2.01
2426 2473 4.844655 ACAATGGTACTCCCTCTGTAAACT 59.155 41.667 0.00 0.00 29.95 2.66
2427 2474 6.021030 ACAATGGTACTCCCTCTGTAAACTA 58.979 40.000 0.00 0.00 29.95 2.24
2428 2475 6.499350 ACAATGGTACTCCCTCTGTAAACTAA 59.501 38.462 0.00 0.00 29.95 2.24
2429 2476 7.182206 ACAATGGTACTCCCTCTGTAAACTAAT 59.818 37.037 0.00 0.00 29.95 1.73
2430 2477 8.701895 CAATGGTACTCCCTCTGTAAACTAATA 58.298 37.037 0.00 0.00 0.00 0.98
2431 2478 9.448587 AATGGTACTCCCTCTGTAAACTAATAT 57.551 33.333 0.00 0.00 0.00 1.28
2433 2480 9.940974 TGGTACTCCCTCTGTAAACTAATATAA 57.059 33.333 0.00 0.00 0.00 0.98
2437 2484 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
2438 2485 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
2439 2486 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
2440 2487 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
2441 2488 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
2458 2505 9.570488 AAGAGCGTTTAGATTACTAAAGTAGTG 57.430 33.333 0.00 0.00 45.42 2.74
2459 2506 8.954350 AGAGCGTTTAGATTACTAAAGTAGTGA 58.046 33.333 0.00 0.00 45.42 3.41
2460 2507 9.733219 GAGCGTTTAGATTACTAAAGTAGTGAT 57.267 33.333 0.00 0.00 45.42 3.06
2461 2508 9.733219 AGCGTTTAGATTACTAAAGTAGTGATC 57.267 33.333 10.62 10.62 46.38 2.92
2489 2536 9.813446 AAACACTCTTATATTAGTTTACGGAGG 57.187 33.333 0.00 0.00 0.00 4.30
2490 2537 7.949434 ACACTCTTATATTAGTTTACGGAGGG 58.051 38.462 0.00 0.00 0.00 4.30
2491 2538 7.781693 ACACTCTTATATTAGTTTACGGAGGGA 59.218 37.037 0.00 0.00 0.00 4.20
2492 2539 8.298140 CACTCTTATATTAGTTTACGGAGGGAG 58.702 40.741 0.00 0.00 0.00 4.30
2493 2540 8.003629 ACTCTTATATTAGTTTACGGAGGGAGT 58.996 37.037 0.00 0.00 0.00 3.85
2494 2541 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
2502 2549 9.950496 TTAGTTTACGGAGGGAGTATATACTAG 57.050 37.037 15.42 6.04 36.50 2.57
2503 2550 8.212259 AGTTTACGGAGGGAGTATATACTAGA 57.788 38.462 15.42 0.00 36.50 2.43
2504 2551 8.320617 AGTTTACGGAGGGAGTATATACTAGAG 58.679 40.741 15.42 6.96 36.50 2.43
2568 2615 4.288398 TGTATACGTACCCCAATTCAGGA 58.712 43.478 0.00 0.00 0.00 3.86
2587 2634 6.074648 TCAGGAGGGTTTCATGTTTTGTATT 58.925 36.000 0.00 0.00 38.68 1.89
2588 2635 6.208599 TCAGGAGGGTTTCATGTTTTGTATTC 59.791 38.462 0.00 0.00 38.68 1.75
2589 2636 5.480422 AGGAGGGTTTCATGTTTTGTATTCC 59.520 40.000 0.00 0.00 0.00 3.01
2590 2637 5.337250 GGAGGGTTTCATGTTTTGTATTCCC 60.337 44.000 0.00 0.00 0.00 3.97
2591 2638 5.402630 AGGGTTTCATGTTTTGTATTCCCT 58.597 37.500 0.00 0.00 36.97 4.20
2592 2639 5.480422 AGGGTTTCATGTTTTGTATTCCCTC 59.520 40.000 0.00 0.00 37.15 4.30
2593 2640 5.337250 GGGTTTCATGTTTTGTATTCCCTCC 60.337 44.000 0.00 0.00 0.00 4.30
2594 2641 5.399013 GTTTCATGTTTTGTATTCCCTCCG 58.601 41.667 0.00 0.00 0.00 4.63
2595 2642 4.295141 TCATGTTTTGTATTCCCTCCGT 57.705 40.909 0.00 0.00 0.00 4.69
2596 2643 4.658063 TCATGTTTTGTATTCCCTCCGTT 58.342 39.130 0.00 0.00 0.00 4.44
2597 2644 4.698304 TCATGTTTTGTATTCCCTCCGTTC 59.302 41.667 0.00 0.00 0.00 3.95
2598 2645 3.414269 TGTTTTGTATTCCCTCCGTTCC 58.586 45.455 0.00 0.00 0.00 3.62
2599 2646 3.073356 TGTTTTGTATTCCCTCCGTTCCT 59.927 43.478 0.00 0.00 0.00 3.36
2600 2647 4.286549 TGTTTTGTATTCCCTCCGTTCCTA 59.713 41.667 0.00 0.00 0.00 2.94
2601 2648 5.221884 TGTTTTGTATTCCCTCCGTTCCTAA 60.222 40.000 0.00 0.00 0.00 2.69
2602 2649 5.502089 TTTGTATTCCCTCCGTTCCTAAA 57.498 39.130 0.00 0.00 0.00 1.85
2603 2650 5.703730 TTGTATTCCCTCCGTTCCTAAAT 57.296 39.130 0.00 0.00 0.00 1.40
2604 2651 6.811634 TTGTATTCCCTCCGTTCCTAAATA 57.188 37.500 0.00 0.00 0.00 1.40
2605 2652 7.383156 TTGTATTCCCTCCGTTCCTAAATAT 57.617 36.000 0.00 0.00 0.00 1.28
2606 2653 7.383156 TGTATTCCCTCCGTTCCTAAATATT 57.617 36.000 0.00 0.00 0.00 1.28
2607 2654 7.808218 TGTATTCCCTCCGTTCCTAAATATTT 58.192 34.615 5.89 5.89 0.00 1.40
2608 2655 7.717875 TGTATTCCCTCCGTTCCTAAATATTTG 59.282 37.037 11.05 1.40 0.00 2.32
2609 2656 5.703730 TCCCTCCGTTCCTAAATATTTGT 57.296 39.130 11.05 0.00 0.00 2.83
2610 2657 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2611 2658 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2612 2659 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2613 2660 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2614 2661 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
2615 2662 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
2616 2663 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
2617 2664 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
2618 2665 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
2633 2680 9.559732 TGTCTTTCTAGAGATTTCAACAAATGA 57.440 29.630 0.00 0.00 31.94 2.57
2634 2681 9.818796 GTCTTTCTAGAGATTTCAACAAATGAC 57.181 33.333 0.00 0.00 37.92 3.06
2635 2682 9.784531 TCTTTCTAGAGATTTCAACAAATGACT 57.215 29.630 0.00 0.00 37.92 3.41
2636 2683 9.823098 CTTTCTAGAGATTTCAACAAATGACTG 57.177 33.333 0.00 0.00 37.92 3.51
2637 2684 7.369803 TCTAGAGATTTCAACAAATGACTGC 57.630 36.000 0.00 0.00 37.92 4.40
2638 2685 6.936335 TCTAGAGATTTCAACAAATGACTGCA 59.064 34.615 0.00 0.00 37.92 4.41
2639 2686 6.585695 AGAGATTTCAACAAATGACTGCAT 57.414 33.333 0.00 0.00 37.92 3.96
2640 2687 7.692460 AGAGATTTCAACAAATGACTGCATA 57.308 32.000 0.00 0.00 37.92 3.14
2641 2688 7.533426 AGAGATTTCAACAAATGACTGCATAC 58.467 34.615 0.00 0.00 37.92 2.39
2642 2689 6.317088 AGATTTCAACAAATGACTGCATACG 58.683 36.000 0.00 0.00 37.92 3.06
2643 2690 5.681337 TTTCAACAAATGACTGCATACGA 57.319 34.783 0.00 0.00 37.92 3.43
2644 2691 5.681337 TTCAACAAATGACTGCATACGAA 57.319 34.783 0.00 0.00 37.92 3.85
2645 2692 5.281693 TCAACAAATGACTGCATACGAAG 57.718 39.130 0.00 0.00 33.44 3.79
2646 2693 3.747099 ACAAATGACTGCATACGAAGC 57.253 42.857 0.00 0.00 33.44 3.86
2647 2694 3.073678 ACAAATGACTGCATACGAAGCA 58.926 40.909 0.00 0.00 40.19 3.91
2648 2695 3.501828 ACAAATGACTGCATACGAAGCAA 59.498 39.130 0.00 0.00 42.17 3.91
2649 2696 4.023279 ACAAATGACTGCATACGAAGCAAA 60.023 37.500 0.00 0.00 42.17 3.68
2650 2697 4.764679 AATGACTGCATACGAAGCAAAA 57.235 36.364 0.00 0.00 42.17 2.44
2651 2698 4.970662 ATGACTGCATACGAAGCAAAAT 57.029 36.364 0.00 0.00 42.17 1.82
2652 2699 4.082274 TGACTGCATACGAAGCAAAATG 57.918 40.909 0.00 0.00 42.17 2.32
2653 2700 3.501828 TGACTGCATACGAAGCAAAATGT 59.498 39.130 0.00 0.00 42.17 2.71
2654 2701 4.023279 TGACTGCATACGAAGCAAAATGTT 60.023 37.500 0.00 0.00 42.17 2.71
2655 2702 4.475944 ACTGCATACGAAGCAAAATGTTC 58.524 39.130 0.00 0.00 42.17 3.18
2656 2703 4.023279 ACTGCATACGAAGCAAAATGTTCA 60.023 37.500 0.00 0.00 42.17 3.18
2657 2704 4.225984 TGCATACGAAGCAAAATGTTCAC 58.774 39.130 0.00 0.00 39.39 3.18
2658 2705 4.225984 GCATACGAAGCAAAATGTTCACA 58.774 39.130 0.00 0.00 0.00 3.58
2659 2706 4.088496 GCATACGAAGCAAAATGTTCACAC 59.912 41.667 0.00 0.00 0.00 3.82
2660 2707 5.451908 CATACGAAGCAAAATGTTCACACT 58.548 37.500 0.00 0.00 0.00 3.55
2661 2708 3.952535 ACGAAGCAAAATGTTCACACTC 58.047 40.909 0.00 0.00 0.00 3.51
2662 2709 3.627577 ACGAAGCAAAATGTTCACACTCT 59.372 39.130 0.00 0.00 0.00 3.24
2663 2710 3.970610 CGAAGCAAAATGTTCACACTCTG 59.029 43.478 0.00 0.00 0.00 3.35
2664 2711 4.260743 CGAAGCAAAATGTTCACACTCTGA 60.261 41.667 0.00 0.00 0.00 3.27
2665 2712 5.581126 AAGCAAAATGTTCACACTCTGAA 57.419 34.783 0.00 0.00 36.46 3.02
2666 2713 5.581126 AGCAAAATGTTCACACTCTGAAA 57.419 34.783 0.00 0.00 40.73 2.69
2667 2714 6.152932 AGCAAAATGTTCACACTCTGAAAT 57.847 33.333 0.00 0.00 40.73 2.17
2668 2715 7.275888 AGCAAAATGTTCACACTCTGAAATA 57.724 32.000 0.00 0.00 40.73 1.40
2669 2716 7.889469 AGCAAAATGTTCACACTCTGAAATAT 58.111 30.769 0.00 0.00 40.73 1.28
2670 2717 7.811236 AGCAAAATGTTCACACTCTGAAATATG 59.189 33.333 0.00 0.00 40.73 1.78
2671 2718 7.411157 GCAAAATGTTCACACTCTGAAATATGC 60.411 37.037 0.00 0.00 40.73 3.14
2672 2719 5.824904 ATGTTCACACTCTGAAATATGCC 57.175 39.130 0.00 0.00 40.73 4.40
2673 2720 4.910195 TGTTCACACTCTGAAATATGCCT 58.090 39.130 0.00 0.00 40.73 4.75
2674 2721 6.048732 TGTTCACACTCTGAAATATGCCTA 57.951 37.500 0.00 0.00 40.73 3.93
2675 2722 6.653020 TGTTCACACTCTGAAATATGCCTAT 58.347 36.000 0.00 0.00 40.73 2.57
2676 2723 7.791029 TGTTCACACTCTGAAATATGCCTATA 58.209 34.615 0.00 0.00 40.73 1.31
2677 2724 8.432013 TGTTCACACTCTGAAATATGCCTATAT 58.568 33.333 0.00 0.00 40.73 0.86
2678 2725 9.929180 GTTCACACTCTGAAATATGCCTATATA 57.071 33.333 0.00 0.00 40.73 0.86
2679 2726 9.929180 TTCACACTCTGAAATATGCCTATATAC 57.071 33.333 0.00 0.00 35.84 1.47
2680 2727 9.088987 TCACACTCTGAAATATGCCTATATACA 57.911 33.333 0.00 0.00 0.00 2.29
2681 2728 9.881649 CACACTCTGAAATATGCCTATATACAT 57.118 33.333 0.00 0.00 0.00 2.29
2683 2730 9.539825 CACTCTGAAATATGCCTATATACATCC 57.460 37.037 0.00 0.00 0.00 3.51
2684 2731 8.417106 ACTCTGAAATATGCCTATATACATCCG 58.583 37.037 0.00 0.00 0.00 4.18
2685 2732 8.306313 TCTGAAATATGCCTATATACATCCGT 57.694 34.615 0.00 0.00 0.00 4.69
2686 2733 8.197439 TCTGAAATATGCCTATATACATCCGTG 58.803 37.037 0.00 0.00 0.00 4.94
2687 2734 7.847096 TGAAATATGCCTATATACATCCGTGT 58.153 34.615 0.00 0.00 42.39 4.49
2688 2735 7.763985 TGAAATATGCCTATATACATCCGTGTG 59.236 37.037 0.00 0.00 39.39 3.82
2689 2736 6.791867 ATATGCCTATATACATCCGTGTGT 57.208 37.500 0.00 0.00 39.39 3.72
2690 2737 4.251543 TGCCTATATACATCCGTGTGTG 57.748 45.455 0.66 0.00 39.39 3.82
2691 2738 3.892588 TGCCTATATACATCCGTGTGTGA 59.107 43.478 0.66 0.00 39.39 3.58
2692 2739 4.526650 TGCCTATATACATCCGTGTGTGAT 59.473 41.667 0.66 0.00 39.39 3.06
2693 2740 5.712917 TGCCTATATACATCCGTGTGTGATA 59.287 40.000 0.66 0.00 39.39 2.15
2694 2741 6.127730 TGCCTATATACATCCGTGTGTGATAG 60.128 42.308 0.66 7.01 39.39 2.08
2695 2742 6.127703 GCCTATATACATCCGTGTGTGATAGT 60.128 42.308 13.75 0.00 39.39 2.12
2696 2743 7.473366 CCTATATACATCCGTGTGTGATAGTC 58.527 42.308 13.75 0.00 39.39 2.59
2697 2744 2.961526 ACATCCGTGTGTGATAGTCC 57.038 50.000 0.00 0.00 37.14 3.85
2698 2745 2.176045 ACATCCGTGTGTGATAGTCCA 58.824 47.619 0.00 0.00 37.14 4.02
2699 2746 2.766263 ACATCCGTGTGTGATAGTCCAT 59.234 45.455 0.00 0.00 37.14 3.41
2700 2747 3.197766 ACATCCGTGTGTGATAGTCCATT 59.802 43.478 0.00 0.00 37.14 3.16
2701 2748 3.973206 TCCGTGTGTGATAGTCCATTT 57.027 42.857 0.00 0.00 0.00 2.32
2702 2749 3.595173 TCCGTGTGTGATAGTCCATTTG 58.405 45.455 0.00 0.00 0.00 2.32
2703 2750 3.259625 TCCGTGTGTGATAGTCCATTTGA 59.740 43.478 0.00 0.00 0.00 2.69
2704 2751 4.000325 CCGTGTGTGATAGTCCATTTGAA 59.000 43.478 0.00 0.00 0.00 2.69
2705 2752 4.454161 CCGTGTGTGATAGTCCATTTGAAA 59.546 41.667 0.00 0.00 0.00 2.69
2706 2753 5.123820 CCGTGTGTGATAGTCCATTTGAAAT 59.876 40.000 0.00 0.00 0.00 2.17
2707 2754 6.250819 CGTGTGTGATAGTCCATTTGAAATC 58.749 40.000 0.00 0.00 0.00 2.17
2708 2755 6.092670 CGTGTGTGATAGTCCATTTGAAATCT 59.907 38.462 0.00 0.00 0.00 2.40
2709 2756 7.361201 CGTGTGTGATAGTCCATTTGAAATCTT 60.361 37.037 0.00 0.00 0.00 2.40
2710 2757 8.946085 GTGTGTGATAGTCCATTTGAAATCTTA 58.054 33.333 0.00 0.00 0.00 2.10
2711 2758 9.513906 TGTGTGATAGTCCATTTGAAATCTTAA 57.486 29.630 0.00 0.00 0.00 1.85
2736 2783 6.937886 AAAACAAATATTTAGAAACGGCGG 57.062 33.333 13.24 0.00 0.00 6.13
2737 2784 4.625972 ACAAATATTTAGAAACGGCGGG 57.374 40.909 13.24 0.00 0.00 6.13
2738 2785 4.263435 ACAAATATTTAGAAACGGCGGGA 58.737 39.130 13.24 0.00 0.00 5.14
2739 2786 4.334481 ACAAATATTTAGAAACGGCGGGAG 59.666 41.667 13.24 0.00 0.00 4.30
2740 2787 3.832615 ATATTTAGAAACGGCGGGAGT 57.167 42.857 13.24 0.00 0.00 3.85
2741 2788 4.942761 ATATTTAGAAACGGCGGGAGTA 57.057 40.909 13.24 0.00 0.00 2.59
2742 2789 3.832615 ATTTAGAAACGGCGGGAGTAT 57.167 42.857 13.24 0.00 0.00 2.12
2743 2790 2.589798 TTAGAAACGGCGGGAGTATG 57.410 50.000 13.24 0.00 0.00 2.39
2744 2791 0.748450 TAGAAACGGCGGGAGTATGG 59.252 55.000 13.24 0.00 0.00 2.74
2745 2792 1.523032 GAAACGGCGGGAGTATGGG 60.523 63.158 13.24 0.00 0.00 4.00
2746 2793 1.963464 GAAACGGCGGGAGTATGGGA 61.963 60.000 13.24 0.00 0.00 4.37
2747 2794 1.555477 AAACGGCGGGAGTATGGGAA 61.555 55.000 13.24 0.00 0.00 3.97
2844 2891 1.205820 GGCGAAGTACGTGGCAAAC 59.794 57.895 16.61 0.00 44.60 2.93
2845 2892 1.500512 GGCGAAGTACGTGGCAAACA 61.501 55.000 16.61 0.00 44.60 2.83
2868 2915 7.275920 ACAAGACTAGGCCTCACAATTATTAG 58.724 38.462 9.68 0.00 0.00 1.73
2869 2916 6.426646 AGACTAGGCCTCACAATTATTAGG 57.573 41.667 9.68 0.00 0.00 2.69
2870 2917 6.143915 AGACTAGGCCTCACAATTATTAGGA 58.856 40.000 9.68 0.00 0.00 2.94
2871 2918 6.042208 AGACTAGGCCTCACAATTATTAGGAC 59.958 42.308 9.68 0.99 37.41 3.85
2872 2919 4.073293 AGGCCTCACAATTATTAGGACG 57.927 45.455 0.00 0.00 42.39 4.79
2873 2920 3.454812 AGGCCTCACAATTATTAGGACGT 59.545 43.478 0.00 0.00 42.39 4.34
2874 2921 4.652421 AGGCCTCACAATTATTAGGACGTA 59.348 41.667 0.00 0.00 42.39 3.57
2875 2922 4.748600 GGCCTCACAATTATTAGGACGTAC 59.251 45.833 0.00 0.00 0.00 3.67
2876 2923 5.452917 GGCCTCACAATTATTAGGACGTACT 60.453 44.000 5.18 5.18 0.00 2.73
2877 2924 6.047231 GCCTCACAATTATTAGGACGTACTT 58.953 40.000 5.12 0.00 0.00 2.24
2878 2925 6.200475 GCCTCACAATTATTAGGACGTACTTC 59.800 42.308 5.12 0.00 0.00 3.01
2879 2926 6.700520 CCTCACAATTATTAGGACGTACTTCC 59.299 42.308 5.12 10.39 35.66 3.46
2881 2928 7.844009 TCACAATTATTAGGACGTACTTCCTT 58.156 34.615 24.51 11.43 44.22 3.36
2882 2929 7.977853 TCACAATTATTAGGACGTACTTCCTTC 59.022 37.037 24.51 0.00 44.22 3.46
2883 2930 7.762615 CACAATTATTAGGACGTACTTCCTTCA 59.237 37.037 24.51 13.15 44.22 3.02
2884 2931 8.483758 ACAATTATTAGGACGTACTTCCTTCAT 58.516 33.333 24.51 18.34 44.22 2.57
2885 2932 8.979574 CAATTATTAGGACGTACTTCCTTCATC 58.020 37.037 24.51 0.00 44.22 2.92
2886 2933 4.996788 TTAGGACGTACTTCCTTCATCC 57.003 45.455 24.51 2.83 44.22 3.51
2887 2934 1.749634 AGGACGTACTTCCTTCATCCG 59.250 52.381 14.97 0.00 44.22 4.18
2888 2935 1.202382 GGACGTACTTCCTTCATCCGG 60.202 57.143 11.07 0.00 32.24 5.14
2889 2936 1.747355 GACGTACTTCCTTCATCCGGA 59.253 52.381 6.61 6.61 0.00 5.14
2890 2937 2.165030 GACGTACTTCCTTCATCCGGAA 59.835 50.000 9.01 0.00 38.18 4.30
2891 2938 2.764572 ACGTACTTCCTTCATCCGGAAT 59.235 45.455 9.01 0.00 39.64 3.01
2892 2939 3.197116 ACGTACTTCCTTCATCCGGAATT 59.803 43.478 9.01 0.00 39.64 2.17
2893 2940 4.403432 ACGTACTTCCTTCATCCGGAATTA 59.597 41.667 9.01 0.00 39.64 1.40
2894 2941 4.743644 CGTACTTCCTTCATCCGGAATTAC 59.256 45.833 9.01 0.00 40.47 1.89
2895 2942 5.451520 CGTACTTCCTTCATCCGGAATTACT 60.452 44.000 9.01 0.00 41.12 2.24
2896 2943 5.437191 ACTTCCTTCATCCGGAATTACTT 57.563 39.130 9.01 0.00 39.64 2.24
2897 2944 5.186198 ACTTCCTTCATCCGGAATTACTTG 58.814 41.667 9.01 0.00 39.64 3.16
2898 2945 4.837093 TCCTTCATCCGGAATTACTTGT 57.163 40.909 9.01 0.00 34.32 3.16
2899 2946 4.766375 TCCTTCATCCGGAATTACTTGTC 58.234 43.478 9.01 0.00 34.32 3.18
2900 2947 3.555956 CCTTCATCCGGAATTACTTGTCG 59.444 47.826 9.01 0.00 34.32 4.35
2901 2948 2.546778 TCATCCGGAATTACTTGTCGC 58.453 47.619 9.01 0.00 0.00 5.19
2902 2949 1.597663 CATCCGGAATTACTTGTCGCC 59.402 52.381 9.01 0.00 0.00 5.54
2903 2950 0.458889 TCCGGAATTACTTGTCGCCG 60.459 55.000 0.00 0.00 38.54 6.46
2904 2951 0.458889 CCGGAATTACTTGTCGCCGA 60.459 55.000 0.00 0.00 41.11 5.54
2905 2952 1.352114 CGGAATTACTTGTCGCCGAA 58.648 50.000 0.00 0.00 41.11 4.30
2906 2953 1.727880 CGGAATTACTTGTCGCCGAAA 59.272 47.619 0.00 0.00 41.11 3.46
2907 2954 2.350498 CGGAATTACTTGTCGCCGAAAT 59.650 45.455 0.00 0.00 41.11 2.17
2908 2955 3.552699 CGGAATTACTTGTCGCCGAAATA 59.447 43.478 0.00 0.00 41.11 1.40
2909 2956 4.317839 CGGAATTACTTGTCGCCGAAATAG 60.318 45.833 0.00 0.00 41.11 1.73
2910 2957 4.807304 GGAATTACTTGTCGCCGAAATAGA 59.193 41.667 0.00 0.00 0.00 1.98
2911 2958 5.465724 GGAATTACTTGTCGCCGAAATAGAT 59.534 40.000 0.00 0.00 0.00 1.98
2912 2959 6.643770 GGAATTACTTGTCGCCGAAATAGATA 59.356 38.462 0.00 0.00 0.00 1.98
2913 2960 7.170320 GGAATTACTTGTCGCCGAAATAGATAA 59.830 37.037 0.00 0.00 0.00 1.75
2914 2961 8.428186 AATTACTTGTCGCCGAAATAGATAAA 57.572 30.769 0.00 0.00 0.00 1.40
2915 2962 7.830940 TTACTTGTCGCCGAAATAGATAAAA 57.169 32.000 0.00 0.00 0.00 1.52
2916 2963 6.103222 ACTTGTCGCCGAAATAGATAAAAC 57.897 37.500 0.00 0.00 0.00 2.43
2917 2964 5.873164 ACTTGTCGCCGAAATAGATAAAACT 59.127 36.000 0.00 0.00 0.00 2.66
2918 2965 5.712217 TGTCGCCGAAATAGATAAAACTG 57.288 39.130 0.00 0.00 0.00 3.16
2919 2966 4.569162 TGTCGCCGAAATAGATAAAACTGG 59.431 41.667 0.00 0.00 0.00 4.00
2920 2967 4.807304 GTCGCCGAAATAGATAAAACTGGA 59.193 41.667 0.00 0.00 0.00 3.86
2921 2968 5.465724 GTCGCCGAAATAGATAAAACTGGAT 59.534 40.000 0.00 0.00 0.00 3.41
2922 2969 5.465390 TCGCCGAAATAGATAAAACTGGATG 59.535 40.000 0.00 0.00 0.00 3.51
2923 2970 5.236478 CGCCGAAATAGATAAAACTGGATGT 59.764 40.000 0.00 0.00 0.00 3.06
2924 2971 6.422701 CGCCGAAATAGATAAAACTGGATGTA 59.577 38.462 0.00 0.00 0.00 2.29
2925 2972 7.117812 CGCCGAAATAGATAAAACTGGATGTAT 59.882 37.037 0.00 0.00 0.00 2.29
2926 2973 8.784043 GCCGAAATAGATAAAACTGGATGTATT 58.216 33.333 0.00 0.00 0.00 1.89
2977 3024 9.918630 ATTCATTTCTTTGACAAGTATTTCTGG 57.081 29.630 0.00 0.00 0.00 3.86
2978 3025 8.690203 TCATTTCTTTGACAAGTATTTCTGGA 57.310 30.769 0.00 0.00 0.00 3.86
2979 3026 8.567948 TCATTTCTTTGACAAGTATTTCTGGAC 58.432 33.333 0.00 0.00 0.00 4.02
2980 3027 6.539649 TTCTTTGACAAGTATTTCTGGACG 57.460 37.500 0.00 0.00 0.00 4.79
2981 3028 4.994852 TCTTTGACAAGTATTTCTGGACGG 59.005 41.667 0.00 0.00 0.00 4.79
2982 3029 4.610605 TTGACAAGTATTTCTGGACGGA 57.389 40.909 0.00 0.00 0.00 4.69
2983 3030 4.188247 TGACAAGTATTTCTGGACGGAG 57.812 45.455 0.00 0.00 0.00 4.63
2986 3033 3.581332 ACAAGTATTTCTGGACGGAGGAA 59.419 43.478 0.00 0.00 0.00 3.36
2998 3045 3.262420 GACGGAGGAAGTACGTACTACA 58.738 50.000 27.59 0.00 41.40 2.74
3004 3051 4.592942 AGGAAGTACGTACTACATGGTCA 58.407 43.478 27.59 0.00 34.99 4.02
3022 3069 1.591594 ACTGTGTGGCGAAGTCGTG 60.592 57.895 2.25 0.00 42.22 4.35
3023 3070 1.591594 CTGTGTGGCGAAGTCGTGT 60.592 57.895 2.25 0.00 42.22 4.49
3027 3074 1.372499 GTGGCGAAGTCGTGTAGCA 60.372 57.895 2.25 0.00 42.22 3.49
3111 3158 4.564110 GGGATGTACGGGGCAGCC 62.564 72.222 1.26 1.26 41.30 4.85
3112 3159 4.910585 GGATGTACGGGGCAGCCG 62.911 72.222 5.00 0.36 32.51 5.52
3136 3183 0.511221 GCAGCGTAAAGAAGCGTCAA 59.489 50.000 1.61 0.00 38.61 3.18
3147 3194 3.603532 AGAAGCGTCAATCACATGATGT 58.396 40.909 0.00 0.00 38.36 3.06
3148 3195 3.620374 AGAAGCGTCAATCACATGATGTC 59.380 43.478 0.00 0.00 38.36 3.06
3149 3196 3.257469 AGCGTCAATCACATGATGTCT 57.743 42.857 0.00 0.00 38.36 3.41
3150 3197 3.603532 AGCGTCAATCACATGATGTCTT 58.396 40.909 0.00 0.00 38.36 3.01
3151 3198 3.373130 AGCGTCAATCACATGATGTCTTG 59.627 43.478 0.00 9.85 38.36 3.02
3152 3199 3.125829 GCGTCAATCACATGATGTCTTGT 59.874 43.478 13.81 0.00 38.36 3.16
3153 3200 4.726021 GCGTCAATCACATGATGTCTTGTC 60.726 45.833 13.81 9.48 38.36 3.18
3154 3201 4.491441 CGTCAATCACATGATGTCTTGTCG 60.491 45.833 16.25 16.25 34.49 4.35
3155 3202 3.371898 TCAATCACATGATGTCTTGTCGC 59.628 43.478 13.81 0.00 34.49 5.19
3156 3203 1.725641 TCACATGATGTCTTGTCGCC 58.274 50.000 0.00 0.00 32.76 5.54
3157 3204 0.729116 CACATGATGTCTTGTCGCCC 59.271 55.000 0.00 0.00 32.76 6.13
3158 3205 0.392998 ACATGATGTCTTGTCGCCCC 60.393 55.000 0.00 0.00 29.59 5.80
3159 3206 1.097547 CATGATGTCTTGTCGCCCCC 61.098 60.000 0.00 0.00 0.00 5.40
3160 3207 1.274703 ATGATGTCTTGTCGCCCCCT 61.275 55.000 0.00 0.00 0.00 4.79
3161 3208 1.299976 GATGTCTTGTCGCCCCCTT 59.700 57.895 0.00 0.00 0.00 3.95
3162 3209 0.322546 GATGTCTTGTCGCCCCCTTT 60.323 55.000 0.00 0.00 0.00 3.11
3163 3210 0.609131 ATGTCTTGTCGCCCCCTTTG 60.609 55.000 0.00 0.00 0.00 2.77
3164 3211 2.282180 TCTTGTCGCCCCCTTTGC 60.282 61.111 0.00 0.00 0.00 3.68
3165 3212 2.597217 CTTGTCGCCCCCTTTGCA 60.597 61.111 0.00 0.00 0.00 4.08
3166 3213 2.909965 TTGTCGCCCCCTTTGCAC 60.910 61.111 0.00 0.00 0.00 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.202070 CCAGTAGAACTCTCGAATCCTTCC 60.202 50.000 0.00 0.00 0.00 3.46
27 28 2.125106 GGGTAGCAACGAGGCCAG 60.125 66.667 5.01 0.00 0.00 4.85
28 29 2.606519 AGGGTAGCAACGAGGCCA 60.607 61.111 5.01 0.00 0.00 5.36
49 50 4.748144 CAACTGGAGGCAGCCCCC 62.748 72.222 8.22 6.37 0.00 5.40
79 81 0.320374 TGGATGACACGAGGGAACAC 59.680 55.000 0.00 0.00 0.00 3.32
112 114 2.908940 CAATCCATCCCAGCGGCC 60.909 66.667 0.00 0.00 0.00 6.13
113 115 1.728490 GAACAATCCATCCCAGCGGC 61.728 60.000 0.00 0.00 0.00 6.53
114 116 1.439353 CGAACAATCCATCCCAGCGG 61.439 60.000 0.00 0.00 0.00 5.52
115 117 2.016961 CGAACAATCCATCCCAGCG 58.983 57.895 0.00 0.00 0.00 5.18
116 118 1.728490 GGCGAACAATCCATCCCAGC 61.728 60.000 0.00 0.00 0.00 4.85
117 119 0.394216 TGGCGAACAATCCATCCCAG 60.394 55.000 0.00 0.00 0.00 4.45
118 120 0.394216 CTGGCGAACAATCCATCCCA 60.394 55.000 0.00 0.00 0.00 4.37
124 126 1.599542 GCACTATCTGGCGAACAATCC 59.400 52.381 0.00 0.00 0.00 3.01
126 128 2.555199 GAGCACTATCTGGCGAACAAT 58.445 47.619 0.00 0.00 34.54 2.71
134 136 1.204704 TCACCAACGAGCACTATCTGG 59.795 52.381 0.00 0.00 0.00 3.86
136 138 3.678056 TTTCACCAACGAGCACTATCT 57.322 42.857 0.00 0.00 0.00 1.98
148 150 3.636679 TCTGACCCAACATTTTCACCAA 58.363 40.909 0.00 0.00 0.00 3.67
165 167 9.605275 ATTCATCATTTCTCGATTAGTTTCTGA 57.395 29.630 0.00 0.00 0.00 3.27
167 169 9.605275 TCATTCATCATTTCTCGATTAGTTTCT 57.395 29.630 0.00 0.00 0.00 2.52
219 221 2.102252 AGCCTAGAGTCTAGTTGCATGC 59.898 50.000 22.78 11.82 0.00 4.06
260 262 1.134521 TGGAGCTGTTAGTTATGGCCG 60.135 52.381 0.00 0.00 0.00 6.13
261 263 2.710096 TGGAGCTGTTAGTTATGGCC 57.290 50.000 0.00 0.00 0.00 5.36
265 267 5.500234 TGCAATCTTGGAGCTGTTAGTTAT 58.500 37.500 0.00 0.00 0.00 1.89
268 270 3.341823 CTGCAATCTTGGAGCTGTTAGT 58.658 45.455 0.00 0.00 39.74 2.24
342 344 2.635915 TCCGACATGGTTAGTTGGACTT 59.364 45.455 0.00 0.00 43.10 3.01
354 356 2.092968 TCCCTTCAATTCTCCGACATGG 60.093 50.000 0.00 0.00 40.09 3.66
357 359 3.559171 CCTTTCCCTTCAATTCTCCGACA 60.559 47.826 0.00 0.00 0.00 4.35
370 372 4.509302 CCCTTTTTCTAGCTCCTTTCCCTT 60.509 45.833 0.00 0.00 0.00 3.95
458 460 0.530650 CTCATCCCCATCGTCGTTGG 60.531 60.000 14.32 14.32 0.00 3.77
470 472 0.538977 CCCATGCACCATCTCATCCC 60.539 60.000 0.00 0.00 0.00 3.85
573 575 5.093849 CGGAGGTTGGATTTAAGGTAAGA 57.906 43.478 0.00 0.00 0.00 2.10
676 678 4.653341 AGAGAGAGAGAGAGAGAGAGAAGG 59.347 50.000 0.00 0.00 0.00 3.46
699 701 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
701 703 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
703 705 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
705 707 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
707 709 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
709 711 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
711 713 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
713 715 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
715 717 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
717 719 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
719 721 4.141846 GCAAGAGAGAGAGAGAGAGAGAGA 60.142 50.000 0.00 0.00 0.00 3.10
720 722 4.125703 GCAAGAGAGAGAGAGAGAGAGAG 58.874 52.174 0.00 0.00 0.00 3.20
721 723 3.519107 TGCAAGAGAGAGAGAGAGAGAGA 59.481 47.826 0.00 0.00 0.00 3.10
722 724 3.624861 GTGCAAGAGAGAGAGAGAGAGAG 59.375 52.174 0.00 0.00 0.00 3.20
723 725 3.008923 TGTGCAAGAGAGAGAGAGAGAGA 59.991 47.826 0.00 0.00 0.00 3.10
724 726 3.346315 TGTGCAAGAGAGAGAGAGAGAG 58.654 50.000 0.00 0.00 0.00 3.20
725 727 3.346315 CTGTGCAAGAGAGAGAGAGAGA 58.654 50.000 0.00 0.00 0.00 3.10
726 728 2.159338 GCTGTGCAAGAGAGAGAGAGAG 60.159 54.545 0.00 0.00 0.00 3.20
727 729 1.818060 GCTGTGCAAGAGAGAGAGAGA 59.182 52.381 0.00 0.00 0.00 3.10
728 730 1.467883 CGCTGTGCAAGAGAGAGAGAG 60.468 57.143 0.00 0.00 0.00 3.20
729 731 0.525311 CGCTGTGCAAGAGAGAGAGA 59.475 55.000 0.00 0.00 0.00 3.10
730 732 0.458197 CCGCTGTGCAAGAGAGAGAG 60.458 60.000 0.00 0.00 0.00 3.20
731 733 0.895559 TCCGCTGTGCAAGAGAGAGA 60.896 55.000 0.00 0.00 0.00 3.10
732 734 0.458197 CTCCGCTGTGCAAGAGAGAG 60.458 60.000 0.00 0.00 0.00 3.20
733 735 1.181741 ACTCCGCTGTGCAAGAGAGA 61.182 55.000 16.09 5.69 0.00 3.10
734 736 1.013005 CACTCCGCTGTGCAAGAGAG 61.013 60.000 11.77 1.87 0.00 3.20
735 737 1.005748 CACTCCGCTGTGCAAGAGA 60.006 57.895 11.77 0.00 0.00 3.10
736 738 2.031516 CCACTCCGCTGTGCAAGAG 61.032 63.158 0.00 5.42 36.68 2.85
737 739 2.031012 CCACTCCGCTGTGCAAGA 59.969 61.111 0.00 0.00 36.68 3.02
738 740 3.730761 GCCACTCCGCTGTGCAAG 61.731 66.667 0.00 0.00 36.68 4.01
1206 1213 5.012561 AGTTCTTGGTCAAGCAAGAGATAGT 59.987 40.000 20.20 9.64 38.48 2.12
1207 1214 5.486526 AGTTCTTGGTCAAGCAAGAGATAG 58.513 41.667 20.20 0.00 38.48 2.08
1208 1215 5.012046 TGAGTTCTTGGTCAAGCAAGAGATA 59.988 40.000 20.20 7.50 38.48 1.98
1447 1454 4.155644 ACTGTACGTACTTACCTGCTTCTC 59.844 45.833 25.12 0.00 0.00 2.87
1463 1470 7.272299 ACATCGTCGTCTATATACTACTGTACG 59.728 40.741 0.00 0.00 0.00 3.67
1464 1471 8.459521 ACATCGTCGTCTATATACTACTGTAC 57.540 38.462 0.00 0.00 0.00 2.90
1470 1477 6.790285 TGCAACATCGTCGTCTATATACTA 57.210 37.500 0.00 0.00 0.00 1.82
1472 1479 7.019418 TGTATGCAACATCGTCGTCTATATAC 58.981 38.462 0.00 0.00 31.43 1.47
1473 1480 7.118680 TCTGTATGCAACATCGTCGTCTATATA 59.881 37.037 0.00 0.00 37.50 0.86
1474 1481 6.009115 TGTATGCAACATCGTCGTCTATAT 57.991 37.500 0.00 0.00 31.43 0.86
1475 1482 5.237779 TCTGTATGCAACATCGTCGTCTATA 59.762 40.000 0.00 0.00 37.50 1.31
1476 1483 4.036380 TCTGTATGCAACATCGTCGTCTAT 59.964 41.667 0.00 0.00 37.50 1.98
1477 1484 3.375922 TCTGTATGCAACATCGTCGTCTA 59.624 43.478 0.00 0.00 37.50 2.59
1478 1485 2.163613 TCTGTATGCAACATCGTCGTCT 59.836 45.455 0.00 0.00 37.50 4.18
1479 1486 2.526077 TCTGTATGCAACATCGTCGTC 58.474 47.619 0.00 0.00 37.50 4.20
1488 1495 2.473609 TCGACGTGTTTCTGTATGCAAC 59.526 45.455 0.00 0.00 0.00 4.17
1705 1712 0.036952 GGACTAGCTGCTTGCACTCA 60.037 55.000 7.79 0.00 45.94 3.41
1747 1763 2.507102 AGATCGTCGCTGCCAACG 60.507 61.111 14.00 14.00 40.17 4.10
1756 1772 2.252855 GGCGCTAGGAGATCGTCG 59.747 66.667 7.64 0.00 0.00 5.12
1801 1817 0.601576 CGTTTGTCACGGACATGGGA 60.602 55.000 7.43 0.00 45.89 4.37
1833 1849 0.475906 GGAATAGGAGCCCTGCATGT 59.524 55.000 4.16 0.00 34.61 3.21
1862 1878 2.809601 GCAGTACGTGGAGGCGTG 60.810 66.667 0.00 0.00 45.33 5.34
1868 1902 1.972752 TGTAGGCGCAGTACGTGGA 60.973 57.895 10.83 0.00 46.11 4.02
2002 2042 1.142531 GGTCGGGTCGAATGGGTAC 59.857 63.158 0.00 0.00 37.72 3.34
2137 2177 1.878656 CGAACTCGTCCTCCAAGGCT 61.879 60.000 0.00 0.00 34.61 4.58
2189 2229 2.002586 GTGGAACGATGGACACATGAG 58.997 52.381 0.00 0.00 37.47 2.90
2243 2289 3.450096 TCTTCTCATCTCATCAGGTGGTG 59.550 47.826 0.00 0.00 30.69 4.17
2267 2313 1.323271 GGTCCTCTCAGCGGTGATCA 61.323 60.000 18.98 6.99 30.18 2.92
2312 2358 8.386012 AGAGAGAAAAATGAGGAGAGGAAATA 57.614 34.615 0.00 0.00 0.00 1.40
2347 2394 3.136009 TCTTTTTCGAGGGAAAGGGTC 57.864 47.619 14.19 0.00 42.72 4.46
2352 2399 8.913487 AATAAGTACTTCTTTTTCGAGGGAAA 57.087 30.769 12.39 0.00 40.29 3.13
2393 2440 8.949421 AGAGGGAGTACCATTGTATTCATTAAT 58.051 33.333 0.00 0.00 43.89 1.40
2412 2459 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
2413 2460 7.504911 ACGCTCTTATATTAGTTTACAGAGGGA 59.495 37.037 14.96 0.00 40.49 4.20
2414 2461 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
2415 2462 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
2432 2479 9.570488 CACTACTTTAGTAATCTAAACGCTCTT 57.430 33.333 0.00 0.00 40.05 2.85
2433 2480 8.954350 TCACTACTTTAGTAATCTAAACGCTCT 58.046 33.333 0.00 0.00 40.05 4.09
2434 2481 9.733219 ATCACTACTTTAGTAATCTAAACGCTC 57.267 33.333 0.00 0.00 40.05 5.03
2435 2482 9.733219 GATCACTACTTTAGTAATCTAAACGCT 57.267 33.333 0.00 0.00 40.05 5.07
2436 2483 9.733219 AGATCACTACTTTAGTAATCTAAACGC 57.267 33.333 0.00 0.00 40.05 4.84
2463 2510 9.813446 CCTCCGTAAACTAATATAAGAGTGTTT 57.187 33.333 0.00 0.00 0.00 2.83
2464 2511 8.419442 CCCTCCGTAAACTAATATAAGAGTGTT 58.581 37.037 0.00 0.00 0.00 3.32
2465 2512 7.781693 TCCCTCCGTAAACTAATATAAGAGTGT 59.218 37.037 0.00 0.00 0.00 3.55
2466 2513 8.174733 TCCCTCCGTAAACTAATATAAGAGTG 57.825 38.462 0.00 0.00 0.00 3.51
2467 2514 8.003629 ACTCCCTCCGTAAACTAATATAAGAGT 58.996 37.037 0.00 0.00 0.00 3.24
2468 2515 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
2476 2523 9.950496 CTAGTATATACTCCCTCCGTAAACTAA 57.050 37.037 18.68 0.00 37.73 2.24
2477 2524 9.326489 TCTAGTATATACTCCCTCCGTAAACTA 57.674 37.037 18.68 0.00 37.73 2.24
2478 2525 8.212259 TCTAGTATATACTCCCTCCGTAAACT 57.788 38.462 18.68 0.00 37.73 2.66
2479 2526 8.100164 ACTCTAGTATATACTCCCTCCGTAAAC 58.900 40.741 18.68 0.00 37.73 2.01
2480 2527 8.212259 ACTCTAGTATATACTCCCTCCGTAAA 57.788 38.462 18.68 0.00 37.73 2.01
2481 2528 7.805083 ACTCTAGTATATACTCCCTCCGTAA 57.195 40.000 18.68 0.00 37.73 3.18
2483 2530 7.993349 ATACTCTAGTATATACTCCCTCCGT 57.007 40.000 18.68 10.74 39.29 4.69
2568 2615 5.402630 AGGGAATACAAAACATGAAACCCT 58.597 37.500 0.00 0.00 37.26 4.34
2587 2634 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
2588 2635 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
2589 2636 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
2590 2637 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
2591 2638 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
2592 2639 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
2607 2654 9.559732 TCATTTGTTGAAATCTCTAGAAAGACA 57.440 29.630 0.00 0.00 28.65 3.41
2608 2655 9.818796 GTCATTTGTTGAAATCTCTAGAAAGAC 57.181 33.333 0.00 0.00 35.70 3.01
2609 2656 9.784531 AGTCATTTGTTGAAATCTCTAGAAAGA 57.215 29.630 0.00 0.00 35.70 2.52
2610 2657 9.823098 CAGTCATTTGTTGAAATCTCTAGAAAG 57.177 33.333 0.00 0.00 35.70 2.62
2611 2658 8.292448 GCAGTCATTTGTTGAAATCTCTAGAAA 58.708 33.333 0.00 0.00 35.70 2.52
2612 2659 7.445096 TGCAGTCATTTGTTGAAATCTCTAGAA 59.555 33.333 0.00 0.00 35.70 2.10
2613 2660 6.936335 TGCAGTCATTTGTTGAAATCTCTAGA 59.064 34.615 0.00 0.00 35.70 2.43
2614 2661 7.137490 TGCAGTCATTTGTTGAAATCTCTAG 57.863 36.000 0.00 0.00 35.70 2.43
2615 2662 7.692460 ATGCAGTCATTTGTTGAAATCTCTA 57.308 32.000 0.00 0.00 35.70 2.43
2616 2663 6.585695 ATGCAGTCATTTGTTGAAATCTCT 57.414 33.333 0.00 0.00 35.70 3.10
2617 2664 6.467047 CGTATGCAGTCATTTGTTGAAATCTC 59.533 38.462 0.00 0.00 35.70 2.75
2618 2665 6.149308 TCGTATGCAGTCATTTGTTGAAATCT 59.851 34.615 0.00 0.00 35.70 2.40
2619 2666 6.314018 TCGTATGCAGTCATTTGTTGAAATC 58.686 36.000 0.00 0.00 35.70 2.17
2620 2667 6.252967 TCGTATGCAGTCATTTGTTGAAAT 57.747 33.333 0.00 0.00 35.70 2.17
2621 2668 5.681337 TCGTATGCAGTCATTTGTTGAAA 57.319 34.783 0.00 0.00 35.70 2.69
2622 2669 5.681337 TTCGTATGCAGTCATTTGTTGAA 57.319 34.783 0.00 0.00 35.70 2.69
2623 2670 4.378356 GCTTCGTATGCAGTCATTTGTTGA 60.378 41.667 0.00 0.00 34.22 3.18
2624 2671 3.848019 GCTTCGTATGCAGTCATTTGTTG 59.152 43.478 0.00 0.00 34.22 3.33
2625 2672 3.501828 TGCTTCGTATGCAGTCATTTGTT 59.498 39.130 0.00 0.00 35.31 2.83
2626 2673 3.073678 TGCTTCGTATGCAGTCATTTGT 58.926 40.909 0.00 0.00 35.31 2.83
2627 2674 3.745332 TGCTTCGTATGCAGTCATTTG 57.255 42.857 0.00 0.00 35.31 2.32
2628 2675 4.764679 TTTGCTTCGTATGCAGTCATTT 57.235 36.364 0.00 0.00 41.71 2.32
2629 2676 4.764679 TTTTGCTTCGTATGCAGTCATT 57.235 36.364 0.00 0.00 41.71 2.57
2630 2677 4.156556 ACATTTTGCTTCGTATGCAGTCAT 59.843 37.500 0.00 0.00 41.71 3.06
2631 2678 3.501828 ACATTTTGCTTCGTATGCAGTCA 59.498 39.130 0.00 0.00 41.71 3.41
2632 2679 4.083581 ACATTTTGCTTCGTATGCAGTC 57.916 40.909 0.00 0.00 41.71 3.51
2633 2680 4.023279 TGAACATTTTGCTTCGTATGCAGT 60.023 37.500 0.00 0.00 41.71 4.40
2634 2681 4.321745 GTGAACATTTTGCTTCGTATGCAG 59.678 41.667 0.00 0.00 41.71 4.41
2635 2682 4.225984 GTGAACATTTTGCTTCGTATGCA 58.774 39.130 0.00 0.00 38.80 3.96
2636 2683 4.088496 GTGTGAACATTTTGCTTCGTATGC 59.912 41.667 0.00 0.00 0.00 3.14
2637 2684 5.451908 AGTGTGAACATTTTGCTTCGTATG 58.548 37.500 0.00 0.00 0.00 2.39
2638 2685 5.470098 AGAGTGTGAACATTTTGCTTCGTAT 59.530 36.000 0.00 0.00 0.00 3.06
2639 2686 4.814234 AGAGTGTGAACATTTTGCTTCGTA 59.186 37.500 0.00 0.00 0.00 3.43
2640 2687 3.627577 AGAGTGTGAACATTTTGCTTCGT 59.372 39.130 0.00 0.00 0.00 3.85
2641 2688 3.970610 CAGAGTGTGAACATTTTGCTTCG 59.029 43.478 0.00 0.00 0.00 3.79
2642 2689 5.173774 TCAGAGTGTGAACATTTTGCTTC 57.826 39.130 0.00 0.00 29.64 3.86
2643 2690 5.581126 TTCAGAGTGTGAACATTTTGCTT 57.419 34.783 0.00 0.00 40.45 3.91
2644 2691 5.581126 TTTCAGAGTGTGAACATTTTGCT 57.419 34.783 1.48 0.00 45.23 3.91
2645 2692 7.411157 GCATATTTCAGAGTGTGAACATTTTGC 60.411 37.037 1.48 4.87 45.23 3.68
2646 2693 7.062605 GGCATATTTCAGAGTGTGAACATTTTG 59.937 37.037 1.48 0.00 45.23 2.44
2647 2694 7.039504 AGGCATATTTCAGAGTGTGAACATTTT 60.040 33.333 1.48 0.00 45.23 1.82
2648 2695 6.435277 AGGCATATTTCAGAGTGTGAACATTT 59.565 34.615 1.48 0.00 45.23 2.32
2649 2696 5.948162 AGGCATATTTCAGAGTGTGAACATT 59.052 36.000 1.48 0.00 45.23 2.71
2650 2697 5.503927 AGGCATATTTCAGAGTGTGAACAT 58.496 37.500 1.48 3.17 45.23 2.71
2651 2698 4.910195 AGGCATATTTCAGAGTGTGAACA 58.090 39.130 1.48 0.00 45.23 3.18
2652 2699 8.839310 ATATAGGCATATTTCAGAGTGTGAAC 57.161 34.615 1.48 0.00 45.23 3.18
2653 2700 9.929180 GTATATAGGCATATTTCAGAGTGTGAA 57.071 33.333 0.00 0.00 43.82 3.18
2654 2701 9.088987 TGTATATAGGCATATTTCAGAGTGTGA 57.911 33.333 0.00 0.00 0.00 3.58
2655 2702 9.881649 ATGTATATAGGCATATTTCAGAGTGTG 57.118 33.333 0.00 0.00 0.00 3.82
2657 2704 9.539825 GGATGTATATAGGCATATTTCAGAGTG 57.460 37.037 0.00 0.00 0.00 3.51
2658 2705 8.417106 CGGATGTATATAGGCATATTTCAGAGT 58.583 37.037 0.00 0.00 0.00 3.24
2659 2706 8.417106 ACGGATGTATATAGGCATATTTCAGAG 58.583 37.037 0.00 0.00 0.00 3.35
2660 2707 8.197439 CACGGATGTATATAGGCATATTTCAGA 58.803 37.037 0.00 0.00 0.00 3.27
2661 2708 7.981789 ACACGGATGTATATAGGCATATTTCAG 59.018 37.037 0.00 0.00 37.26 3.02
2662 2709 7.763985 CACACGGATGTATATAGGCATATTTCA 59.236 37.037 0.00 0.00 36.72 2.69
2663 2710 7.764443 ACACACGGATGTATATAGGCATATTTC 59.236 37.037 0.00 0.00 36.72 2.17
2664 2711 7.549134 CACACACGGATGTATATAGGCATATTT 59.451 37.037 0.00 0.00 36.72 1.40
2665 2712 7.041721 CACACACGGATGTATATAGGCATATT 58.958 38.462 0.00 0.00 36.72 1.28
2666 2713 6.379988 TCACACACGGATGTATATAGGCATAT 59.620 38.462 0.00 0.00 36.72 1.78
2667 2714 5.712917 TCACACACGGATGTATATAGGCATA 59.287 40.000 0.00 0.00 36.72 3.14
2668 2715 4.526650 TCACACACGGATGTATATAGGCAT 59.473 41.667 0.00 0.00 36.72 4.40
2669 2716 3.892588 TCACACACGGATGTATATAGGCA 59.107 43.478 0.00 0.00 36.72 4.75
2670 2717 4.514781 TCACACACGGATGTATATAGGC 57.485 45.455 0.00 0.00 36.72 3.93
2671 2718 7.392494 ACTATCACACACGGATGTATATAGG 57.608 40.000 17.69 8.00 36.72 2.57
2672 2719 7.120726 TGGACTATCACACACGGATGTATATAG 59.879 40.741 14.69 14.69 36.72 1.31
2673 2720 6.943718 TGGACTATCACACACGGATGTATATA 59.056 38.462 0.00 0.00 36.72 0.86
2674 2721 5.773176 TGGACTATCACACACGGATGTATAT 59.227 40.000 0.00 0.00 36.72 0.86
2675 2722 5.134661 TGGACTATCACACACGGATGTATA 58.865 41.667 0.00 0.00 36.72 1.47
2676 2723 3.958147 TGGACTATCACACACGGATGTAT 59.042 43.478 0.00 0.00 36.72 2.29
2677 2724 3.358118 TGGACTATCACACACGGATGTA 58.642 45.455 0.00 0.00 36.72 2.29
2678 2725 2.176045 TGGACTATCACACACGGATGT 58.824 47.619 0.00 0.00 40.80 3.06
2679 2726 2.959507 TGGACTATCACACACGGATG 57.040 50.000 0.00 0.00 0.00 3.51
2680 2727 4.081142 TCAAATGGACTATCACACACGGAT 60.081 41.667 0.00 0.00 0.00 4.18
2681 2728 3.259625 TCAAATGGACTATCACACACGGA 59.740 43.478 0.00 0.00 0.00 4.69
2682 2729 3.595173 TCAAATGGACTATCACACACGG 58.405 45.455 0.00 0.00 0.00 4.94
2683 2730 5.605564 TTTCAAATGGACTATCACACACG 57.394 39.130 0.00 0.00 0.00 4.49
2684 2731 7.383102 AGATTTCAAATGGACTATCACACAC 57.617 36.000 0.00 0.00 0.00 3.82
2685 2732 9.513906 TTAAGATTTCAAATGGACTATCACACA 57.486 29.630 0.00 0.00 0.00 3.72
2712 2759 6.366604 CCCGCCGTTTCTAAATATTTGTTTTT 59.633 34.615 11.05 0.00 0.00 1.94
2713 2760 5.865013 CCCGCCGTTTCTAAATATTTGTTTT 59.135 36.000 11.05 0.00 0.00 2.43
2714 2761 5.183522 TCCCGCCGTTTCTAAATATTTGTTT 59.816 36.000 11.05 0.00 0.00 2.83
2715 2762 4.701171 TCCCGCCGTTTCTAAATATTTGTT 59.299 37.500 11.05 0.00 0.00 2.83
2716 2763 4.263435 TCCCGCCGTTTCTAAATATTTGT 58.737 39.130 11.05 0.00 0.00 2.83
2717 2764 4.334481 ACTCCCGCCGTTTCTAAATATTTG 59.666 41.667 11.05 1.65 0.00 2.32
2718 2765 4.520179 ACTCCCGCCGTTTCTAAATATTT 58.480 39.130 5.89 5.89 0.00 1.40
2719 2766 4.146745 ACTCCCGCCGTTTCTAAATATT 57.853 40.909 0.00 0.00 0.00 1.28
2720 2767 3.832615 ACTCCCGCCGTTTCTAAATAT 57.167 42.857 0.00 0.00 0.00 1.28
2721 2768 4.501915 CCATACTCCCGCCGTTTCTAAATA 60.502 45.833 0.00 0.00 0.00 1.40
2722 2769 3.463944 CATACTCCCGCCGTTTCTAAAT 58.536 45.455 0.00 0.00 0.00 1.40
2723 2770 2.419021 CCATACTCCCGCCGTTTCTAAA 60.419 50.000 0.00 0.00 0.00 1.85
2724 2771 1.137479 CCATACTCCCGCCGTTTCTAA 59.863 52.381 0.00 0.00 0.00 2.10
2725 2772 0.748450 CCATACTCCCGCCGTTTCTA 59.252 55.000 0.00 0.00 0.00 2.10
2726 2773 1.520666 CCATACTCCCGCCGTTTCT 59.479 57.895 0.00 0.00 0.00 2.52
2727 2774 1.523032 CCCATACTCCCGCCGTTTC 60.523 63.158 0.00 0.00 0.00 2.78
2728 2775 1.555477 TTCCCATACTCCCGCCGTTT 61.555 55.000 0.00 0.00 0.00 3.60
2729 2776 1.991167 TTCCCATACTCCCGCCGTT 60.991 57.895 0.00 0.00 0.00 4.44
2730 2777 2.364579 TTCCCATACTCCCGCCGT 60.365 61.111 0.00 0.00 0.00 5.68
2731 2778 2.108362 GTTCCCATACTCCCGCCG 59.892 66.667 0.00 0.00 0.00 6.46
2732 2779 1.146263 CTGTTCCCATACTCCCGCC 59.854 63.158 0.00 0.00 0.00 6.13
2733 2780 0.252197 AACTGTTCCCATACTCCCGC 59.748 55.000 0.00 0.00 0.00 6.13
2734 2781 2.781681 AAACTGTTCCCATACTCCCG 57.218 50.000 0.00 0.00 0.00 5.14
2735 2782 3.054655 TGCTAAACTGTTCCCATACTCCC 60.055 47.826 0.00 0.00 0.00 4.30
2736 2783 4.216411 TGCTAAACTGTTCCCATACTCC 57.784 45.455 0.00 0.00 0.00 3.85
2737 2784 5.001232 TGTTGCTAAACTGTTCCCATACTC 58.999 41.667 0.00 0.00 37.19 2.59
2738 2785 4.980573 TGTTGCTAAACTGTTCCCATACT 58.019 39.130 0.00 0.00 37.19 2.12
2739 2786 5.447279 CGATGTTGCTAAACTGTTCCCATAC 60.447 44.000 0.00 0.00 37.19 2.39
2740 2787 4.634004 CGATGTTGCTAAACTGTTCCCATA 59.366 41.667 0.00 0.00 37.19 2.74
2741 2788 3.440173 CGATGTTGCTAAACTGTTCCCAT 59.560 43.478 0.00 0.00 37.19 4.00
2742 2789 2.811431 CGATGTTGCTAAACTGTTCCCA 59.189 45.455 0.00 0.00 37.19 4.37
2743 2790 2.161609 CCGATGTTGCTAAACTGTTCCC 59.838 50.000 0.00 0.00 37.19 3.97
2744 2791 2.812011 ACCGATGTTGCTAAACTGTTCC 59.188 45.455 0.00 0.00 37.19 3.62
2745 2792 3.120304 GGACCGATGTTGCTAAACTGTTC 60.120 47.826 0.00 0.00 37.19 3.18
2746 2793 2.812011 GGACCGATGTTGCTAAACTGTT 59.188 45.455 0.00 0.00 37.19 3.16
2747 2794 2.224426 TGGACCGATGTTGCTAAACTGT 60.224 45.455 0.00 0.00 37.19 3.55
2829 2876 2.870411 AGTCTTGTTTGCCACGTACTTC 59.130 45.455 0.00 0.00 0.00 3.01
2844 2891 6.708054 CCTAATAATTGTGAGGCCTAGTCTTG 59.292 42.308 4.42 0.00 0.00 3.02
2845 2892 6.615726 TCCTAATAATTGTGAGGCCTAGTCTT 59.384 38.462 4.42 0.00 0.00 3.01
2868 2915 1.202382 CCGGATGAAGGAAGTACGTCC 60.202 57.143 19.04 19.04 38.03 4.79
2869 2916 1.747355 TCCGGATGAAGGAAGTACGTC 59.253 52.381 0.00 0.00 34.33 4.34
2870 2917 1.843368 TCCGGATGAAGGAAGTACGT 58.157 50.000 0.00 0.00 34.33 3.57
2871 2918 2.953466 TTCCGGATGAAGGAAGTACG 57.047 50.000 4.15 0.00 42.33 3.67
2877 2924 4.679639 CGACAAGTAATTCCGGATGAAGGA 60.680 45.833 4.15 0.00 36.14 3.36
2878 2925 3.555956 CGACAAGTAATTCCGGATGAAGG 59.444 47.826 4.15 0.00 36.14 3.46
2879 2926 3.001330 GCGACAAGTAATTCCGGATGAAG 59.999 47.826 4.15 0.44 36.14 3.02
2880 2927 2.933906 GCGACAAGTAATTCCGGATGAA 59.066 45.455 4.15 0.00 37.38 2.57
2881 2928 2.546778 GCGACAAGTAATTCCGGATGA 58.453 47.619 4.15 0.00 0.00 2.92
2882 2929 1.597663 GGCGACAAGTAATTCCGGATG 59.402 52.381 4.15 0.97 0.00 3.51
2883 2930 1.805120 CGGCGACAAGTAATTCCGGAT 60.805 52.381 4.15 0.00 33.85 4.18
2884 2931 0.458889 CGGCGACAAGTAATTCCGGA 60.459 55.000 0.00 0.00 33.85 5.14
2885 2932 0.458889 TCGGCGACAAGTAATTCCGG 60.459 55.000 4.99 0.00 37.65 5.14
2886 2933 1.352114 TTCGGCGACAAGTAATTCCG 58.648 50.000 10.16 0.00 38.34 4.30
2887 2934 4.807304 TCTATTTCGGCGACAAGTAATTCC 59.193 41.667 10.16 0.00 0.00 3.01
2888 2935 5.961395 TCTATTTCGGCGACAAGTAATTC 57.039 39.130 10.16 0.00 0.00 2.17
2889 2936 8.428186 TTTATCTATTTCGGCGACAAGTAATT 57.572 30.769 10.16 0.00 0.00 1.40
2890 2937 8.333186 GTTTTATCTATTTCGGCGACAAGTAAT 58.667 33.333 10.16 9.16 0.00 1.89
2891 2938 7.546667 AGTTTTATCTATTTCGGCGACAAGTAA 59.453 33.333 10.16 0.01 0.00 2.24
2892 2939 7.009815 CAGTTTTATCTATTTCGGCGACAAGTA 59.990 37.037 10.16 0.00 0.00 2.24
2893 2940 5.873164 AGTTTTATCTATTTCGGCGACAAGT 59.127 36.000 10.16 0.00 0.00 3.16
2894 2941 6.185399 CAGTTTTATCTATTTCGGCGACAAG 58.815 40.000 10.16 7.59 0.00 3.16
2895 2942 5.064198 CCAGTTTTATCTATTTCGGCGACAA 59.936 40.000 10.16 8.07 0.00 3.18
2896 2943 4.569162 CCAGTTTTATCTATTTCGGCGACA 59.431 41.667 10.16 2.52 0.00 4.35
2897 2944 4.807304 TCCAGTTTTATCTATTTCGGCGAC 59.193 41.667 10.16 0.00 0.00 5.19
2898 2945 5.013568 TCCAGTTTTATCTATTTCGGCGA 57.986 39.130 4.99 4.99 0.00 5.54
2899 2946 5.236478 ACATCCAGTTTTATCTATTTCGGCG 59.764 40.000 0.00 0.00 0.00 6.46
2900 2947 6.619801 ACATCCAGTTTTATCTATTTCGGC 57.380 37.500 0.00 0.00 0.00 5.54
2951 2998 9.918630 CCAGAAATACTTGTCAAAGAAATGAAT 57.081 29.630 0.00 0.00 36.84 2.57
2952 2999 9.130661 TCCAGAAATACTTGTCAAAGAAATGAA 57.869 29.630 0.00 0.00 36.84 2.57
2953 3000 8.567948 GTCCAGAAATACTTGTCAAAGAAATGA 58.432 33.333 0.00 0.00 36.84 2.57
2954 3001 7.535258 CGTCCAGAAATACTTGTCAAAGAAATG 59.465 37.037 0.00 0.00 36.84 2.32
2955 3002 7.308589 CCGTCCAGAAATACTTGTCAAAGAAAT 60.309 37.037 0.00 0.00 36.84 2.17
2956 3003 6.017440 CCGTCCAGAAATACTTGTCAAAGAAA 60.017 38.462 0.00 0.00 36.84 2.52
2957 3004 5.468746 CCGTCCAGAAATACTTGTCAAAGAA 59.531 40.000 0.00 0.00 36.84 2.52
2958 3005 4.994852 CCGTCCAGAAATACTTGTCAAAGA 59.005 41.667 0.00 0.00 36.84 2.52
2959 3006 4.994852 TCCGTCCAGAAATACTTGTCAAAG 59.005 41.667 0.00 0.00 39.49 2.77
2960 3007 4.963373 TCCGTCCAGAAATACTTGTCAAA 58.037 39.130 0.00 0.00 0.00 2.69
2961 3008 4.562757 CCTCCGTCCAGAAATACTTGTCAA 60.563 45.833 0.00 0.00 0.00 3.18
2962 3009 3.056107 CCTCCGTCCAGAAATACTTGTCA 60.056 47.826 0.00 0.00 0.00 3.58
2963 3010 3.194968 TCCTCCGTCCAGAAATACTTGTC 59.805 47.826 0.00 0.00 0.00 3.18
2964 3011 3.170717 TCCTCCGTCCAGAAATACTTGT 58.829 45.455 0.00 0.00 0.00 3.16
2965 3012 3.887621 TCCTCCGTCCAGAAATACTTG 57.112 47.619 0.00 0.00 0.00 3.16
2966 3013 3.838903 ACTTCCTCCGTCCAGAAATACTT 59.161 43.478 0.00 0.00 0.00 2.24
2967 3014 3.442076 ACTTCCTCCGTCCAGAAATACT 58.558 45.455 0.00 0.00 0.00 2.12
2968 3015 3.889520 ACTTCCTCCGTCCAGAAATAC 57.110 47.619 0.00 0.00 0.00 1.89
2969 3016 3.379372 CGTACTTCCTCCGTCCAGAAATA 59.621 47.826 0.00 0.00 0.00 1.40
2970 3017 2.165845 CGTACTTCCTCCGTCCAGAAAT 59.834 50.000 0.00 0.00 0.00 2.17
2971 3018 1.542915 CGTACTTCCTCCGTCCAGAAA 59.457 52.381 0.00 0.00 0.00 2.52
2972 3019 1.171308 CGTACTTCCTCCGTCCAGAA 58.829 55.000 0.00 0.00 0.00 3.02
2973 3020 0.037303 ACGTACTTCCTCCGTCCAGA 59.963 55.000 0.00 0.00 0.00 3.86
2974 3021 1.399791 GTACGTACTTCCTCCGTCCAG 59.600 57.143 18.47 0.00 36.12 3.86
2975 3022 1.003580 AGTACGTACTTCCTCCGTCCA 59.996 52.381 22.45 0.00 36.12 4.02
2976 3023 1.743996 AGTACGTACTTCCTCCGTCC 58.256 55.000 22.45 0.00 36.12 4.79
2977 3024 3.262420 TGTAGTACGTACTTCCTCCGTC 58.738 50.000 31.58 12.99 37.73 4.79
2978 3025 3.334583 TGTAGTACGTACTTCCTCCGT 57.665 47.619 31.58 9.16 37.73 4.69
2979 3026 3.003068 CCATGTAGTACGTACTTCCTCCG 59.997 52.174 31.58 15.69 37.73 4.63
2980 3027 3.950395 ACCATGTAGTACGTACTTCCTCC 59.050 47.826 31.58 15.39 37.73 4.30
2981 3028 4.637534 TGACCATGTAGTACGTACTTCCTC 59.362 45.833 31.58 19.19 37.73 3.71
2982 3029 4.397417 GTGACCATGTAGTACGTACTTCCT 59.603 45.833 31.58 17.50 37.73 3.36
2983 3030 4.397417 AGTGACCATGTAGTACGTACTTCC 59.603 45.833 31.58 22.03 37.73 3.46
2986 3033 4.155462 CACAGTGACCATGTAGTACGTACT 59.845 45.833 29.62 29.62 40.24 2.73
2998 3045 0.603707 CTTCGCCACACAGTGACCAT 60.604 55.000 7.81 0.00 35.23 3.55
3004 3051 1.591594 CACGACTTCGCCACACAGT 60.592 57.895 0.00 0.00 44.43 3.55
3022 3069 2.517450 GGTGTCGCGCTCATGCTAC 61.517 63.158 5.56 0.00 36.97 3.58
3023 3070 2.202743 GGTGTCGCGCTCATGCTA 60.203 61.111 5.56 0.00 36.97 3.49
3112 3159 1.057361 CTTCTTTACGCTGCGTCGC 59.943 57.895 32.44 11.10 41.54 5.19
3121 3168 4.091365 TCATGTGATTGACGCTTCTTTACG 59.909 41.667 0.00 0.00 0.00 3.18
3136 3183 2.283298 GGCGACAAGACATCATGTGAT 58.717 47.619 0.00 0.00 34.56 3.06
3147 3194 2.282180 GCAAAGGGGGCGACAAGA 60.282 61.111 0.00 0.00 0.00 3.02
3148 3195 2.597217 TGCAAAGGGGGCGACAAG 60.597 61.111 0.00 0.00 0.00 3.16
3149 3196 2.909965 GTGCAAAGGGGGCGACAA 60.910 61.111 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.