Multiple sequence alignment - TraesCS3A01G199600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G199600 chr3A 100.000 4792 0 0 1 4792 326461205 326465996 0.000000e+00 8850.0
1 TraesCS3A01G199600 chr3A 91.533 685 49 8 3 678 529210787 529210103 0.000000e+00 935.0
2 TraesCS3A01G199600 chr3A 92.111 469 20 5 4339 4790 326481734 326482202 0.000000e+00 645.0
3 TraesCS3A01G199600 chr3A 84.848 561 55 14 4259 4790 314300022 314299463 5.460000e-149 538.0
4 TraesCS3A01G199600 chr3A 84.848 429 45 3 4381 4790 293710976 293710549 9.600000e-112 414.0
5 TraesCS3A01G199600 chr3A 88.338 343 28 8 403 737 652356524 652356186 7.470000e-108 401.0
6 TraesCS3A01G199600 chr3A 88.047 343 29 9 403 737 652693732 652693394 3.480000e-106 396.0
7 TraesCS3A01G199600 chr3A 90.798 163 5 2 4258 4410 320268322 320268484 4.860000e-50 209.0
8 TraesCS3A01G199600 chr3A 87.952 166 10 5 4259 4414 306813202 306813037 2.280000e-43 187.0
9 TraesCS3A01G199600 chr3A 84.677 124 13 5 3070 3190 481263646 481263526 8.420000e-23 119.0
10 TraesCS3A01G199600 chr3D 98.273 2374 38 2 778 3150 242602835 242600464 0.000000e+00 4154.0
11 TraesCS3A01G199600 chr3D 95.327 642 28 1 3392 4031 242600314 242599673 0.000000e+00 1018.0
12 TraesCS3A01G199600 chr3D 93.238 281 19 0 3151 3431 62528333 62528613 9.600000e-112 414.0
13 TraesCS3A01G199600 chr3B 97.240 2210 55 4 803 3009 342494898 342497104 0.000000e+00 3738.0
14 TraesCS3A01G199600 chr3B 96.321 598 21 1 3434 4031 342499004 342499600 0.000000e+00 981.0
15 TraesCS3A01G199600 chr3B 97.183 71 2 0 3008 3078 342498929 342498999 2.340000e-23 121.0
16 TraesCS3A01G199600 chr3B 93.750 80 3 1 3073 3150 191657153 191657232 8.420000e-23 119.0
17 TraesCS3A01G199600 chrUn 98.216 1962 32 2 1190 3150 109508008 109509967 0.000000e+00 3426.0
18 TraesCS3A01G199600 chrUn 95.483 642 27 1 3392 4031 109510117 109510758 0.000000e+00 1024.0
19 TraesCS3A01G199600 chrUn 98.383 371 6 0 778 1148 109507395 109507765 0.000000e+00 652.0
20 TraesCS3A01G199600 chrUn 88.800 125 10 1 4138 4258 109529429 109529553 2.990000e-32 150.0
21 TraesCS3A01G199600 chrUn 89.041 73 7 1 4067 4139 49814787 49814858 6.610000e-14 89.8
22 TraesCS3A01G199600 chr1B 97.636 1819 38 3 1263 3078 471519171 471520987 0.000000e+00 3116.0
23 TraesCS3A01G199600 chr1B 97.496 599 14 1 3434 4031 471520992 471521590 0.000000e+00 1022.0
24 TraesCS3A01G199600 chr1B 96.438 393 5 3 803 1187 471517295 471517686 1.450000e-179 640.0
25 TraesCS3A01G199600 chr1B 97.959 98 1 1 803 900 471518334 471518430 8.250000e-38 169.0
26 TraesCS3A01G199600 chr1B 94.872 78 2 1 3075 3150 360430342 360430419 2.340000e-23 121.0
27 TraesCS3A01G199600 chr5A 91.588 737 48 11 3 736 237552315 237553040 0.000000e+00 1005.0
28 TraesCS3A01G199600 chr5A 89.881 168 7 2 4259 4416 621479162 621478995 1.750000e-49 207.0
29 TraesCS3A01G199600 chr5A 85.000 80 12 0 4067 4146 540591998 540591919 1.110000e-11 82.4
30 TraesCS3A01G199600 chr6A 87.796 549 39 12 4258 4778 271037862 271038410 6.810000e-173 617.0
31 TraesCS3A01G199600 chr6A 86.275 561 48 8 4259 4790 271045507 271046067 2.490000e-162 582.0
32 TraesCS3A01G199600 chr6A 86.391 338 35 7 403 737 190572811 190572482 4.560000e-95 359.0
33 TraesCS3A01G199600 chr6A 92.857 224 15 1 1 223 610526333 610526556 1.660000e-84 324.0
34 TraesCS3A01G199600 chr6A 87.730 163 10 5 4258 4410 268449483 268449645 1.060000e-41 182.0
35 TraesCS3A01G199600 chr7A 86.679 548 45 11 4259 4778 346860633 346861180 2.490000e-162 582.0
36 TraesCS3A01G199600 chr7A 86.071 560 42 12 4259 4790 371111124 371111675 1.940000e-158 569.0
37 TraesCS3A01G199600 chr7A 86.347 542 46 12 4259 4772 346872879 346873420 2.500000e-157 566.0
38 TraesCS3A01G199600 chr7A 87.537 337 31 8 403 737 128578450 128578123 3.500000e-101 379.0
39 TraesCS3A01G199600 chr7A 87.240 337 33 7 403 737 484488513 484488841 4.530000e-100 375.0
40 TraesCS3A01G199600 chr7A 86.667 345 32 9 403 736 128739137 128739478 2.110000e-98 370.0
41 TraesCS3A01G199600 chr7A 87.773 229 15 7 3 228 592911368 592911586 6.150000e-64 255.0
42 TraesCS3A01G199600 chr7A 88.623 167 9 2 4258 4414 534231123 534230957 1.360000e-45 195.0
43 TraesCS3A01G199600 chr2A 85.027 561 54 17 4259 4790 335497655 335498214 1.170000e-150 544.0
44 TraesCS3A01G199600 chr2A 89.520 229 11 7 3 228 537256890 537256672 1.310000e-70 278.0
45 TraesCS3A01G199600 chr1A 82.759 580 51 19 4259 4790 199513085 199513663 5.610000e-129 472.0
46 TraesCS3A01G199600 chr1A 81.818 154 24 4 4259 4410 457180957 457181108 5.030000e-25 126.0
47 TraesCS3A01G199600 chr6B 89.444 360 35 2 3074 3431 347424127 347424485 7.310000e-123 451.0
48 TraesCS3A01G199600 chr6B 87.336 229 15 8 3 228 634499634 634499851 2.860000e-62 250.0
49 TraesCS3A01G199600 chr6D 93.594 281 18 0 3151 3431 347890929 347891209 2.060000e-113 420.0
50 TraesCS3A01G199600 chr7D 93.238 281 19 0 3151 3431 156284549 156284829 9.600000e-112 414.0
51 TraesCS3A01G199600 chr7D 93.238 281 19 0 3151 3431 392182747 392183027 9.600000e-112 414.0
52 TraesCS3A01G199600 chr7D 93.214 280 19 0 3152 3431 540193880 540193601 3.450000e-111 412.0
53 TraesCS3A01G199600 chr7D 86.391 338 34 8 403 737 256280414 256280086 4.560000e-95 359.0
54 TraesCS3A01G199600 chr2D 92.958 284 19 1 3151 3433 449907317 449907034 3.450000e-111 412.0
55 TraesCS3A01G199600 chr2D 89.083 229 12 7 3 228 625561385 625561603 6.110000e-69 272.0
56 TraesCS3A01G199600 chr2D 81.481 81 5 1 4067 4147 203715997 203715927 1.860000e-04 58.4
57 TraesCS3A01G199600 chr4D 92.883 281 20 0 3151 3431 120929192 120928912 4.460000e-110 409.0
58 TraesCS3A01G199600 chr4D 87.665 227 15 6 5 228 20902410 20902626 7.960000e-63 252.0
59 TraesCS3A01G199600 chr4D 96.000 75 1 1 3078 3150 262035116 262035190 2.340000e-23 121.0
60 TraesCS3A01G199600 chr5D 92.857 280 20 0 3152 3431 530706755 530706476 1.610000e-109 407.0
61 TraesCS3A01G199600 chr5D 96.000 75 1 1 3078 3150 347661865 347661791 2.340000e-23 121.0
62 TraesCS3A01G199600 chr5D 91.892 74 6 0 4067 4140 469241166 469241093 2.360000e-18 104.0
63 TraesCS3A01G199600 chr5D 79.825 114 14 5 4144 4252 464931807 464931916 1.850000e-09 75.0
64 TraesCS3A01G199600 chr4B 86.761 355 33 6 3079 3431 106740218 106740560 2.710000e-102 383.0
65 TraesCS3A01G199600 chr4A 83.138 427 52 9 4381 4790 247709670 247710093 5.860000e-99 372.0
66 TraesCS3A01G199600 chr4A 84.229 279 26 2 4490 4750 212593036 212592758 6.150000e-64 255.0
67 TraesCS3A01G199600 chr4A 87.629 194 10 4 4259 4440 305912151 305912342 3.760000e-51 213.0
68 TraesCS3A01G199600 chr4A 88.398 181 9 3 4257 4427 314540262 314540084 1.750000e-49 207.0
69 TraesCS3A01G199600 chr4A 88.554 166 9 2 4258 4413 278930508 278930343 4.890000e-45 193.0
70 TraesCS3A01G199600 chr4A 90.517 116 7 1 4147 4258 97868985 97868870 2.990000e-32 150.0
71 TraesCS3A01G199600 chr4A 90.123 81 8 0 4067 4147 153732566 153732486 6.560000e-19 106.0
72 TraesCS3A01G199600 chr4A 89.041 73 7 1 4067 4139 642962189 642962260 6.610000e-14 89.8
73 TraesCS3A01G199600 chr1D 87.336 229 15 7 3 228 232160319 232160102 2.860000e-62 250.0
74 TraesCS3A01G199600 chr2B 87.821 156 18 1 4635 4790 714466255 714466101 1.060000e-41 182.0
75 TraesCS3A01G199600 chr2B 89.744 78 8 0 4067 4144 163424467 163424544 3.050000e-17 100.0
76 TraesCS3A01G199600 chr5B 86.822 129 13 1 4138 4262 336335900 336336028 1.800000e-29 141.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G199600 chr3A 326461205 326465996 4791 False 8850.000000 8850 100.000000 1 4792 1 chr3A.!!$F2 4791
1 TraesCS3A01G199600 chr3A 529210103 529210787 684 True 935.000000 935 91.533000 3 678 1 chr3A.!!$R5 675
2 TraesCS3A01G199600 chr3A 314299463 314300022 559 True 538.000000 538 84.848000 4259 4790 1 chr3A.!!$R3 531
3 TraesCS3A01G199600 chr3D 242599673 242602835 3162 True 2586.000000 4154 96.800000 778 4031 2 chr3D.!!$R1 3253
4 TraesCS3A01G199600 chr3B 342494898 342499600 4702 False 1613.333333 3738 96.914667 803 4031 3 chr3B.!!$F2 3228
5 TraesCS3A01G199600 chrUn 109507395 109510758 3363 False 1700.666667 3426 97.360667 778 4031 3 chrUn.!!$F3 3253
6 TraesCS3A01G199600 chr1B 471517295 471521590 4295 False 1236.750000 3116 97.382250 803 4031 4 chr1B.!!$F2 3228
7 TraesCS3A01G199600 chr5A 237552315 237553040 725 False 1005.000000 1005 91.588000 3 736 1 chr5A.!!$F1 733
8 TraesCS3A01G199600 chr6A 271037862 271038410 548 False 617.000000 617 87.796000 4258 4778 1 chr6A.!!$F2 520
9 TraesCS3A01G199600 chr6A 271045507 271046067 560 False 582.000000 582 86.275000 4259 4790 1 chr6A.!!$F3 531
10 TraesCS3A01G199600 chr7A 346860633 346861180 547 False 582.000000 582 86.679000 4259 4778 1 chr7A.!!$F2 519
11 TraesCS3A01G199600 chr7A 371111124 371111675 551 False 569.000000 569 86.071000 4259 4790 1 chr7A.!!$F4 531
12 TraesCS3A01G199600 chr7A 346872879 346873420 541 False 566.000000 566 86.347000 4259 4772 1 chr7A.!!$F3 513
13 TraesCS3A01G199600 chr2A 335497655 335498214 559 False 544.000000 544 85.027000 4259 4790 1 chr2A.!!$F1 531
14 TraesCS3A01G199600 chr1A 199513085 199513663 578 False 472.000000 472 82.759000 4259 4790 1 chr1A.!!$F1 531

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
306 307 0.036306 GAGGGAGGCAGGAAAAACGA 59.964 55.0 0.0 0.0 0.00 3.85 F
1510 2937 0.107831 TTGACTCCCAACCACTTCGG 59.892 55.0 0.0 0.0 42.50 4.30 F
3240 6523 0.847373 TGGGTGTTTGGTTCTAGCCA 59.153 50.0 0.0 0.0 38.28 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1871 3311 0.820871 GCGTCTTGATCTGGAGAGGT 59.179 55.0 12.3 0.0 32.07 3.85 R
3365 6648 0.108424 TTTTGCCACACTTGCCACAC 60.108 50.0 0.0 0.0 0.00 3.82 R
4250 7546 0.536724 TGCTCCGCATCAGTATGTGT 59.463 50.0 0.0 0.0 41.21 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 7.070571 TGTTTCCTTTGTTTGGAGATTGGTTAT 59.929 33.333 0.00 0.00 34.76 1.89
64 65 6.380274 TGAGCTAAGCTAGGCTACTAAAGAAA 59.620 38.462 12.40 0.00 39.88 2.52
107 108 9.202273 GTGAATTGATTTTTGTTGCCTTGTATA 57.798 29.630 0.00 0.00 0.00 1.47
147 148 6.825944 TGAAAATTGATTACCATCCGTCAA 57.174 33.333 0.00 0.00 35.33 3.18
153 154 8.519799 AATTGATTACCATCCGTCAATTAACT 57.480 30.769 9.65 0.00 44.79 2.24
256 257 5.772521 CCAAATAGAGGTTGGTTTTGTCTG 58.227 41.667 0.00 0.00 40.64 3.51
283 284 5.241506 CAGATGAGAAAACCAGCTAAAACCA 59.758 40.000 0.00 0.00 0.00 3.67
303 304 0.112412 GTGGAGGGAGGCAGGAAAAA 59.888 55.000 0.00 0.00 0.00 1.94
306 307 0.036306 GAGGGAGGCAGGAAAAACGA 59.964 55.000 0.00 0.00 0.00 3.85
357 358 3.987868 GCTTGACTAAAGATGTGACGACA 59.012 43.478 0.00 0.00 38.24 4.35
520 523 6.507900 TGGTCTTTAGAGATTGATCGTGATC 58.492 40.000 2.86 2.86 34.90 2.92
612 616 3.606687 AGAGGGTGACGCGAAAATAAAT 58.393 40.909 15.93 0.00 0.00 1.40
617 621 4.209703 GGGTGACGCGAAAATAAATCGATA 59.790 41.667 15.93 0.00 42.76 2.92
618 622 5.276963 GGGTGACGCGAAAATAAATCGATAA 60.277 40.000 15.93 0.00 42.76 1.75
619 623 6.186785 GGTGACGCGAAAATAAATCGATAAA 58.813 36.000 15.93 0.00 42.76 1.40
620 624 6.683708 GGTGACGCGAAAATAAATCGATAAAA 59.316 34.615 15.93 0.00 42.76 1.52
621 625 7.375017 GGTGACGCGAAAATAAATCGATAAAAT 59.625 33.333 15.93 0.00 42.76 1.82
622 626 8.192396 GTGACGCGAAAATAAATCGATAAAATG 58.808 33.333 15.93 0.00 42.76 2.32
623 627 8.117370 TGACGCGAAAATAAATCGATAAAATGA 58.883 29.630 15.93 0.00 42.76 2.57
624 628 8.475926 ACGCGAAAATAAATCGATAAAATGAG 57.524 30.769 15.93 0.00 42.76 2.90
625 629 7.586300 ACGCGAAAATAAATCGATAAAATGAGG 59.414 33.333 15.93 0.00 42.76 3.86
626 630 7.059488 CGCGAAAATAAATCGATAAAATGAGGG 59.941 37.037 0.00 0.00 42.76 4.30
627 631 8.073768 GCGAAAATAAATCGATAAAATGAGGGA 58.926 33.333 0.00 0.00 42.76 4.20
628 632 9.944663 CGAAAATAAATCGATAAAATGAGGGAA 57.055 29.630 0.00 0.00 42.76 3.97
630 634 9.730420 AAAATAAATCGATAAAATGAGGGAACG 57.270 29.630 0.00 0.00 0.00 3.95
631 635 8.671384 AATAAATCGATAAAATGAGGGAACGA 57.329 30.769 0.00 0.00 0.00 3.85
632 636 6.604735 AAATCGATAAAATGAGGGAACGAG 57.395 37.500 0.00 0.00 32.47 4.18
633 637 4.994907 TCGATAAAATGAGGGAACGAGA 57.005 40.909 0.00 0.00 0.00 4.04
634 638 5.333299 TCGATAAAATGAGGGAACGAGAA 57.667 39.130 0.00 0.00 0.00 2.87
635 639 5.726397 TCGATAAAATGAGGGAACGAGAAA 58.274 37.500 0.00 0.00 0.00 2.52
636 640 6.167685 TCGATAAAATGAGGGAACGAGAAAA 58.832 36.000 0.00 0.00 0.00 2.29
637 641 6.651643 TCGATAAAATGAGGGAACGAGAAAAA 59.348 34.615 0.00 0.00 0.00 1.94
638 642 7.335924 TCGATAAAATGAGGGAACGAGAAAAAT 59.664 33.333 0.00 0.00 0.00 1.82
639 643 7.640240 CGATAAAATGAGGGAACGAGAAAAATC 59.360 37.037 0.00 0.00 0.00 2.17
640 644 6.901081 AAAATGAGGGAACGAGAAAAATCT 57.099 33.333 0.00 0.00 0.00 2.40
641 645 7.996098 AAAATGAGGGAACGAGAAAAATCTA 57.004 32.000 0.00 0.00 0.00 1.98
642 646 7.996098 AAATGAGGGAACGAGAAAAATCTAA 57.004 32.000 0.00 0.00 0.00 2.10
643 647 7.996098 AATGAGGGAACGAGAAAAATCTAAA 57.004 32.000 0.00 0.00 0.00 1.85
644 648 7.996098 ATGAGGGAACGAGAAAAATCTAAAA 57.004 32.000 0.00 0.00 0.00 1.52
645 649 7.811117 TGAGGGAACGAGAAAAATCTAAAAA 57.189 32.000 0.00 0.00 0.00 1.94
677 681 5.520376 AAAACCAGTGAAAATGAGAGGTG 57.480 39.130 0.00 0.00 30.28 4.00
678 682 4.437682 AACCAGTGAAAATGAGAGGTGA 57.562 40.909 0.00 0.00 30.28 4.02
679 683 4.013267 ACCAGTGAAAATGAGAGGTGAG 57.987 45.455 0.00 0.00 30.28 3.51
680 684 3.648067 ACCAGTGAAAATGAGAGGTGAGA 59.352 43.478 0.00 0.00 30.28 3.27
681 685 3.999663 CCAGTGAAAATGAGAGGTGAGAC 59.000 47.826 0.00 0.00 30.28 3.36
682 686 3.677121 CAGTGAAAATGAGAGGTGAGACG 59.323 47.826 0.00 0.00 30.28 4.18
683 687 3.574396 AGTGAAAATGAGAGGTGAGACGA 59.426 43.478 0.00 0.00 0.00 4.20
684 688 4.039245 AGTGAAAATGAGAGGTGAGACGAA 59.961 41.667 0.00 0.00 0.00 3.85
685 689 4.750098 GTGAAAATGAGAGGTGAGACGAAA 59.250 41.667 0.00 0.00 0.00 3.46
686 690 5.236478 GTGAAAATGAGAGGTGAGACGAAAA 59.764 40.000 0.00 0.00 0.00 2.29
687 691 5.820423 TGAAAATGAGAGGTGAGACGAAAAA 59.180 36.000 0.00 0.00 0.00 1.94
712 716 1.595794 CCGAAACGGGGATTATCAACG 59.404 52.381 2.00 6.30 44.15 4.10
713 717 2.542597 CGAAACGGGGATTATCAACGA 58.457 47.619 13.09 0.00 0.00 3.85
714 718 2.538449 CGAAACGGGGATTATCAACGAG 59.462 50.000 13.09 0.00 0.00 4.18
715 719 3.528532 GAAACGGGGATTATCAACGAGT 58.471 45.455 13.09 2.52 0.00 4.18
716 720 4.685924 GAAACGGGGATTATCAACGAGTA 58.314 43.478 13.09 0.00 0.00 2.59
717 721 3.722728 ACGGGGATTATCAACGAGTAC 57.277 47.619 13.09 0.00 0.00 2.73
718 722 3.294214 ACGGGGATTATCAACGAGTACT 58.706 45.455 13.09 0.00 0.00 2.73
719 723 3.703052 ACGGGGATTATCAACGAGTACTT 59.297 43.478 13.09 0.00 0.00 2.24
720 724 4.202090 ACGGGGATTATCAACGAGTACTTC 60.202 45.833 13.09 0.00 0.00 3.01
721 725 4.202080 CGGGGATTATCAACGAGTACTTCA 60.202 45.833 0.00 0.00 0.00 3.02
722 726 5.509163 CGGGGATTATCAACGAGTACTTCAT 60.509 44.000 0.00 0.00 0.00 2.57
723 727 6.289064 GGGGATTATCAACGAGTACTTCATT 58.711 40.000 0.00 0.00 0.00 2.57
724 728 7.439381 GGGGATTATCAACGAGTACTTCATTA 58.561 38.462 0.00 0.00 0.00 1.90
725 729 8.095169 GGGGATTATCAACGAGTACTTCATTAT 58.905 37.037 0.00 0.00 0.00 1.28
726 730 8.926710 GGGATTATCAACGAGTACTTCATTATG 58.073 37.037 0.00 0.00 0.00 1.90
727 731 9.692749 GGATTATCAACGAGTACTTCATTATGA 57.307 33.333 0.00 0.00 0.00 2.15
732 736 8.502105 TCAACGAGTACTTCATTATGAGTAGA 57.498 34.615 0.00 0.00 0.00 2.59
733 737 8.613482 TCAACGAGTACTTCATTATGAGTAGAG 58.387 37.037 0.00 0.00 0.00 2.43
734 738 8.613482 CAACGAGTACTTCATTATGAGTAGAGA 58.387 37.037 0.00 0.00 0.00 3.10
735 739 8.911918 ACGAGTACTTCATTATGAGTAGAGAT 57.088 34.615 0.00 0.00 0.00 2.75
736 740 9.344772 ACGAGTACTTCATTATGAGTAGAGATT 57.655 33.333 0.00 0.00 0.00 2.40
752 756 8.956533 AGTAGAGATTAAGGAAAGATTTCAGC 57.043 34.615 7.56 0.00 38.92 4.26
753 757 6.917217 AGAGATTAAGGAAAGATTTCAGCG 57.083 37.500 7.56 0.00 38.92 5.18
754 758 5.819901 AGAGATTAAGGAAAGATTTCAGCGG 59.180 40.000 7.56 0.00 38.92 5.52
755 759 4.884164 AGATTAAGGAAAGATTTCAGCGGG 59.116 41.667 7.56 0.00 38.92 6.13
756 760 2.879103 AAGGAAAGATTTCAGCGGGA 57.121 45.000 7.56 0.00 38.92 5.14
757 761 2.115343 AGGAAAGATTTCAGCGGGAC 57.885 50.000 7.56 0.00 38.92 4.46
758 762 1.095600 GGAAAGATTTCAGCGGGACC 58.904 55.000 7.56 0.00 38.92 4.46
759 763 1.095600 GAAAGATTTCAGCGGGACCC 58.904 55.000 0.00 0.00 37.15 4.46
760 764 0.323451 AAAGATTTCAGCGGGACCCC 60.323 55.000 4.46 0.00 0.00 4.95
761 765 2.124278 GATTTCAGCGGGACCCCC 60.124 66.667 4.46 0.00 41.09 5.40
762 766 2.614013 ATTTCAGCGGGACCCCCT 60.614 61.111 4.46 0.00 42.67 4.79
763 767 2.610532 GATTTCAGCGGGACCCCCTC 62.611 65.000 4.46 0.00 42.67 4.30
764 768 4.649705 TTCAGCGGGACCCCCTCA 62.650 66.667 4.46 0.00 42.67 3.86
765 769 4.649705 TCAGCGGGACCCCCTCAA 62.650 66.667 4.46 0.00 42.67 3.02
766 770 4.410400 CAGCGGGACCCCCTCAAC 62.410 72.222 4.46 0.00 42.67 3.18
770 774 3.961414 GGGACCCCCTCAACGCAA 61.961 66.667 0.00 0.00 41.34 4.85
771 775 2.671963 GGACCCCCTCAACGCAAC 60.672 66.667 0.00 0.00 0.00 4.17
772 776 3.047877 GACCCCCTCAACGCAACG 61.048 66.667 0.00 0.00 0.00 4.10
989 1003 4.642542 GCGTACTCGGGCGGATCC 62.643 72.222 0.00 0.00 37.56 3.36
1349 2772 0.631753 TCCTCCCGAATCTGACTCCT 59.368 55.000 0.00 0.00 0.00 3.69
1350 2773 1.850998 TCCTCCCGAATCTGACTCCTA 59.149 52.381 0.00 0.00 0.00 2.94
1487 2914 5.355711 TCCCTTCCCTCTTTAGAAACCATA 58.644 41.667 0.00 0.00 0.00 2.74
1492 2919 8.055790 CCTTCCCTCTTTAGAAACCATAATCTT 58.944 37.037 0.00 0.00 0.00 2.40
1510 2937 0.107831 TTGACTCCCAACCACTTCGG 59.892 55.000 0.00 0.00 42.50 4.30
1714 3154 4.044308 TGATGCAACTAGGAAAGGGGATA 58.956 43.478 0.00 0.00 0.00 2.59
1780 3220 2.808543 GGATAAGATTAAGCTGCCACCG 59.191 50.000 0.00 0.00 0.00 4.94
1871 3311 3.438183 GTTAGGGACAGAGTTCCAGGTA 58.562 50.000 0.00 0.00 37.40 3.08
2237 3677 1.847328 TTCTGTGCTGGAGACGGATA 58.153 50.000 0.00 0.00 39.98 2.59
2255 3695 6.406370 ACGGATATTGAAGTTGACATTGAGA 58.594 36.000 0.00 0.00 0.00 3.27
2412 3852 1.400494 GAAAGTTGCGTCTGGTTGTGT 59.600 47.619 0.00 0.00 0.00 3.72
2450 3890 5.204292 AGATAGAGTCTGATACAAGTGGCA 58.796 41.667 1.86 0.00 35.31 4.92
2591 4031 1.071699 TGGTCAGTGGCCTTTACAGTC 59.928 52.381 16.31 0.00 0.00 3.51
2673 4113 7.231317 GGATGTTATTGATAGCCAAAGGATTGA 59.769 37.037 0.00 0.00 38.94 2.57
3137 6403 0.876399 CATTTTTGCCAAGCTTGCCC 59.124 50.000 21.43 13.86 0.00 5.36
3150 6416 1.269723 GCTTGCCCAAGGTTAGTTCAC 59.730 52.381 9.81 0.00 38.80 3.18
3151 6417 2.863809 CTTGCCCAAGGTTAGTTCACT 58.136 47.619 0.06 0.00 34.87 3.41
3152 6418 2.270352 TGCCCAAGGTTAGTTCACTG 57.730 50.000 0.00 0.00 0.00 3.66
3153 6419 1.493022 TGCCCAAGGTTAGTTCACTGT 59.507 47.619 0.00 0.00 0.00 3.55
3154 6420 2.092103 TGCCCAAGGTTAGTTCACTGTT 60.092 45.455 0.00 0.00 0.00 3.16
3155 6421 2.956333 GCCCAAGGTTAGTTCACTGTTT 59.044 45.455 0.00 0.00 0.00 2.83
3156 6422 3.243401 GCCCAAGGTTAGTTCACTGTTTG 60.243 47.826 0.00 0.00 0.00 2.93
3158 6424 3.951680 CCAAGGTTAGTTCACTGTTTGGT 59.048 43.478 0.00 0.00 0.00 3.67
3159 6425 4.401202 CCAAGGTTAGTTCACTGTTTGGTT 59.599 41.667 0.00 0.00 0.00 3.67
3160 6426 5.105513 CCAAGGTTAGTTCACTGTTTGGTTT 60.106 40.000 0.00 0.00 0.00 3.27
3161 6427 5.830000 AGGTTAGTTCACTGTTTGGTTTC 57.170 39.130 0.00 0.00 0.00 2.78
3162 6428 5.506708 AGGTTAGTTCACTGTTTGGTTTCT 58.493 37.500 0.00 0.00 0.00 2.52
3163 6429 6.655930 AGGTTAGTTCACTGTTTGGTTTCTA 58.344 36.000 0.00 0.00 0.00 2.10
3164 6430 6.766467 AGGTTAGTTCACTGTTTGGTTTCTAG 59.234 38.462 0.00 0.00 0.00 2.43
3166 6432 3.883489 AGTTCACTGTTTGGTTTCTAGCC 59.117 43.478 0.00 0.00 0.00 3.93
3168 6434 4.098914 TCACTGTTTGGTTTCTAGCCAT 57.901 40.909 0.00 0.00 35.71 4.40
3169 6435 5.235850 TCACTGTTTGGTTTCTAGCCATA 57.764 39.130 0.00 0.00 35.71 2.74
3170 6436 5.001232 TCACTGTTTGGTTTCTAGCCATAC 58.999 41.667 0.00 0.00 38.08 2.39
3184 6467 1.067635 GCCATACCTTGCCACACTTTG 60.068 52.381 0.00 0.00 0.00 2.77
3186 6469 2.228822 CCATACCTTGCCACACTTTGTC 59.771 50.000 0.00 0.00 0.00 3.18
3187 6470 2.719531 TACCTTGCCACACTTTGTCA 57.280 45.000 0.00 0.00 0.00 3.58
3188 6471 1.102978 ACCTTGCCACACTTTGTCAC 58.897 50.000 0.00 0.00 0.00 3.67
3190 6473 1.682854 CCTTGCCACACTTTGTCACAT 59.317 47.619 0.00 0.00 0.00 3.21
3191 6474 2.287788 CCTTGCCACACTTTGTCACATC 60.288 50.000 0.00 0.00 0.00 3.06
3192 6475 2.346766 TGCCACACTTTGTCACATCT 57.653 45.000 0.00 0.00 0.00 2.90
3193 6476 2.221169 TGCCACACTTTGTCACATCTC 58.779 47.619 0.00 0.00 0.00 2.75
3194 6477 2.221169 GCCACACTTTGTCACATCTCA 58.779 47.619 0.00 0.00 0.00 3.27
3197 6480 3.470709 CACACTTTGTCACATCTCACCT 58.529 45.455 0.00 0.00 0.00 4.00
3199 6482 5.056480 CACACTTTGTCACATCTCACCTTA 58.944 41.667 0.00 0.00 0.00 2.69
3200 6483 5.178252 CACACTTTGTCACATCTCACCTTAG 59.822 44.000 0.00 0.00 0.00 2.18
3201 6484 5.163301 ACACTTTGTCACATCTCACCTTAGT 60.163 40.000 0.00 0.00 0.00 2.24
3202 6485 5.406780 CACTTTGTCACATCTCACCTTAGTC 59.593 44.000 0.00 0.00 0.00 2.59
3203 6486 5.070446 ACTTTGTCACATCTCACCTTAGTCA 59.930 40.000 0.00 0.00 0.00 3.41
3204 6487 5.545063 TTGTCACATCTCACCTTAGTCAA 57.455 39.130 0.00 0.00 0.00 3.18
3205 6488 4.883083 TGTCACATCTCACCTTAGTCAAC 58.117 43.478 0.00 0.00 0.00 3.18
3206 6489 4.588951 TGTCACATCTCACCTTAGTCAACT 59.411 41.667 0.00 0.00 0.00 3.16
3207 6490 5.070446 TGTCACATCTCACCTTAGTCAACTT 59.930 40.000 0.00 0.00 0.00 2.66
3208 6491 5.992217 GTCACATCTCACCTTAGTCAACTTT 59.008 40.000 0.00 0.00 0.00 2.66
3209 6492 5.991606 TCACATCTCACCTTAGTCAACTTTG 59.008 40.000 0.00 0.00 0.00 2.77
3210 6493 5.991606 CACATCTCACCTTAGTCAACTTTGA 59.008 40.000 0.00 0.00 34.20 2.69
3224 6507 3.223674 ACTTTGACCAAGTTAGGTGGG 57.776 47.619 2.23 0.00 43.89 4.61
3225 6508 2.512476 ACTTTGACCAAGTTAGGTGGGT 59.488 45.455 2.23 0.00 43.89 4.51
3226 6509 2.649531 TTGACCAAGTTAGGTGGGTG 57.350 50.000 2.23 0.00 43.38 4.61
3227 6510 1.513858 TGACCAAGTTAGGTGGGTGT 58.486 50.000 2.23 0.00 43.38 4.16
3228 6511 1.847737 TGACCAAGTTAGGTGGGTGTT 59.152 47.619 2.23 0.00 43.38 3.32
3229 6512 2.242708 TGACCAAGTTAGGTGGGTGTTT 59.757 45.455 2.23 0.00 43.38 2.83
3230 6513 2.621526 GACCAAGTTAGGTGGGTGTTTG 59.378 50.000 2.23 0.00 43.38 2.93
3231 6514 1.960689 CCAAGTTAGGTGGGTGTTTGG 59.039 52.381 0.00 0.00 32.03 3.28
3232 6515 2.661718 CAAGTTAGGTGGGTGTTTGGT 58.338 47.619 0.00 0.00 0.00 3.67
3233 6516 3.028130 CAAGTTAGGTGGGTGTTTGGTT 58.972 45.455 0.00 0.00 0.00 3.67
3234 6517 2.940158 AGTTAGGTGGGTGTTTGGTTC 58.060 47.619 0.00 0.00 0.00 3.62
3235 6518 2.512476 AGTTAGGTGGGTGTTTGGTTCT 59.488 45.455 0.00 0.00 0.00 3.01
3236 6519 3.717913 AGTTAGGTGGGTGTTTGGTTCTA 59.282 43.478 0.00 0.00 0.00 2.10
3237 6520 2.951229 AGGTGGGTGTTTGGTTCTAG 57.049 50.000 0.00 0.00 0.00 2.43
3238 6521 1.202891 AGGTGGGTGTTTGGTTCTAGC 60.203 52.381 0.00 0.00 0.00 3.42
3239 6522 1.244816 GTGGGTGTTTGGTTCTAGCC 58.755 55.000 0.00 0.00 0.00 3.93
3240 6523 0.847373 TGGGTGTTTGGTTCTAGCCA 59.153 50.000 0.00 0.00 38.28 4.75
3241 6524 1.244816 GGGTGTTTGGTTCTAGCCAC 58.755 55.000 0.00 0.00 38.42 5.01
3242 6525 1.477923 GGGTGTTTGGTTCTAGCCACA 60.478 52.381 0.00 0.00 38.42 4.17
3243 6526 1.607148 GGTGTTTGGTTCTAGCCACAC 59.393 52.381 0.16 0.16 39.10 3.82
3244 6527 1.607148 GTGTTTGGTTCTAGCCACACC 59.393 52.381 3.97 0.00 38.17 4.16
3245 6528 1.493022 TGTTTGGTTCTAGCCACACCT 59.507 47.619 3.97 0.00 38.17 4.00
3246 6529 2.092103 TGTTTGGTTCTAGCCACACCTT 60.092 45.455 3.97 0.00 38.17 3.50
3247 6530 3.136809 TGTTTGGTTCTAGCCACACCTTA 59.863 43.478 3.97 0.00 38.17 2.69
3248 6531 3.695830 TTGGTTCTAGCCACACCTTAG 57.304 47.619 0.00 0.00 38.42 2.18
3249 6532 1.906574 TGGTTCTAGCCACACCTTAGG 59.093 52.381 0.00 0.00 32.81 2.69
3261 6544 6.530019 CCACACCTTAGGCAAGAATTATTT 57.470 37.500 0.00 0.00 33.20 1.40
3262 6545 6.935167 CCACACCTTAGGCAAGAATTATTTT 58.065 36.000 0.00 0.00 33.20 1.82
3263 6546 8.062065 CCACACCTTAGGCAAGAATTATTTTA 57.938 34.615 0.00 0.00 33.20 1.52
3264 6547 8.695456 CCACACCTTAGGCAAGAATTATTTTAT 58.305 33.333 0.00 0.00 33.20 1.40
3273 6556 9.189156 AGGCAAGAATTATTTTATAAGCAGTGA 57.811 29.630 0.00 0.00 0.00 3.41
3274 6557 9.801873 GGCAAGAATTATTTTATAAGCAGTGAA 57.198 29.630 0.00 0.00 0.00 3.18
3278 6561 8.914011 AGAATTATTTTATAAGCAGTGAACCCC 58.086 33.333 0.00 0.00 0.00 4.95
3279 6562 8.602472 AATTATTTTATAAGCAGTGAACCCCA 57.398 30.769 0.00 0.00 0.00 4.96
3280 6563 5.914898 ATTTTATAAGCAGTGAACCCCAC 57.085 39.130 0.00 0.00 46.03 4.61
3290 6573 3.066291 GTGAACCCCACATGTCATACA 57.934 47.619 0.00 0.00 45.03 2.29
3291 6574 2.747446 GTGAACCCCACATGTCATACAC 59.253 50.000 0.00 0.00 45.03 2.90
3292 6575 2.373502 TGAACCCCACATGTCATACACA 59.626 45.455 0.00 0.00 40.18 3.72
3293 6576 2.489938 ACCCCACATGTCATACACAC 57.510 50.000 0.00 0.00 38.04 3.82
3294 6577 1.702401 ACCCCACATGTCATACACACA 59.298 47.619 0.00 0.00 38.04 3.72
3295 6578 2.107378 ACCCCACATGTCATACACACAA 59.893 45.455 0.00 0.00 38.04 3.33
3296 6579 3.153130 CCCCACATGTCATACACACAAA 58.847 45.455 0.00 0.00 38.04 2.83
3297 6580 3.571828 CCCCACATGTCATACACACAAAA 59.428 43.478 0.00 0.00 38.04 2.44
3298 6581 4.038522 CCCCACATGTCATACACACAAAAA 59.961 41.667 0.00 0.00 38.04 1.94
3299 6582 5.221880 CCCACATGTCATACACACAAAAAG 58.778 41.667 0.00 0.00 38.04 2.27
3300 6583 5.221224 CCCACATGTCATACACACAAAAAGT 60.221 40.000 0.00 0.00 38.04 2.66
3314 6597 3.944650 ACAAAAAGTGTGGCAAAATTCCC 59.055 39.130 0.00 0.00 39.72 3.97
3315 6598 4.198530 CAAAAAGTGTGGCAAAATTCCCT 58.801 39.130 0.00 0.00 0.00 4.20
3316 6599 4.502105 AAAAGTGTGGCAAAATTCCCTT 57.498 36.364 0.00 0.00 0.00 3.95
3317 6600 5.622346 AAAAGTGTGGCAAAATTCCCTTA 57.378 34.783 0.00 0.00 0.00 2.69
3318 6601 4.871933 AAGTGTGGCAAAATTCCCTTAG 57.128 40.909 0.00 0.00 0.00 2.18
3319 6602 3.165071 AGTGTGGCAAAATTCCCTTAGG 58.835 45.455 0.00 0.00 0.00 2.69
3320 6603 1.899142 TGTGGCAAAATTCCCTTAGGC 59.101 47.619 0.00 0.00 0.00 3.93
3321 6604 1.899142 GTGGCAAAATTCCCTTAGGCA 59.101 47.619 0.00 0.00 0.00 4.75
3322 6605 2.301583 GTGGCAAAATTCCCTTAGGCAA 59.698 45.455 0.00 0.00 32.07 4.52
3326 6609 2.566724 CAAAATTCCCTTAGGCAAGCCA 59.433 45.455 14.40 0.00 38.92 4.75
3348 6631 3.923017 AGTGTGGCTAACAATTTGAGC 57.077 42.857 2.79 2.51 41.57 4.26
3349 6632 3.221771 AGTGTGGCTAACAATTTGAGCA 58.778 40.909 2.79 0.00 41.57 4.26
3350 6633 3.636300 AGTGTGGCTAACAATTTGAGCAA 59.364 39.130 2.79 0.00 41.57 3.91
3353 6636 4.229876 GTGGCTAACAATTTGAGCAACTC 58.770 43.478 2.79 0.00 37.21 3.01
3354 6637 3.888323 TGGCTAACAATTTGAGCAACTCA 59.112 39.130 2.79 0.00 38.87 3.41
3356 6639 9.751134 TGTGGCTAACAATTTGAGCAACTCAAG 62.751 40.741 15.05 2.58 42.48 3.02
3364 6647 3.207265 TGAGCAACTCAAGTAAGGCAA 57.793 42.857 0.00 0.00 37.57 4.52
3365 6648 3.141398 TGAGCAACTCAAGTAAGGCAAG 58.859 45.455 0.00 0.00 37.57 4.01
3366 6649 3.142174 GAGCAACTCAAGTAAGGCAAGT 58.858 45.455 0.00 0.00 0.00 3.16
3367 6650 2.880890 AGCAACTCAAGTAAGGCAAGTG 59.119 45.455 0.00 0.00 0.00 3.16
3368 6651 2.618709 GCAACTCAAGTAAGGCAAGTGT 59.381 45.455 0.00 0.00 0.00 3.55
3369 6652 3.548818 GCAACTCAAGTAAGGCAAGTGTG 60.549 47.826 0.00 0.00 0.00 3.82
3370 6653 2.851195 ACTCAAGTAAGGCAAGTGTGG 58.149 47.619 0.00 0.00 0.00 4.17
3378 6661 4.715983 GCAAGTGTGGCAAGTGTG 57.284 55.556 0.00 0.00 0.00 3.82
3379 6662 1.066257 GCAAGTGTGGCAAGTGTGG 59.934 57.895 0.00 0.00 0.00 4.17
3417 6710 5.741425 CAACATATGGCAAAGATAGTCACG 58.259 41.667 7.80 0.00 0.00 4.35
3419 6712 5.858381 ACATATGGCAAAGATAGTCACGAT 58.142 37.500 7.80 0.00 0.00 3.73
3432 6725 1.066430 GTCACGATCCAAACAGCCCTA 60.066 52.381 0.00 0.00 0.00 3.53
3476 6771 4.393062 ACACCAATCTATTTTCAGCAGTCG 59.607 41.667 0.00 0.00 0.00 4.18
3485 6780 7.097192 TCTATTTTCAGCAGTCGACTTGTATT 58.903 34.615 17.26 5.37 0.00 1.89
3518 6813 3.331150 TCACTCATTTCGTACGGCAAAT 58.669 40.909 16.52 11.93 0.00 2.32
3597 6892 1.937546 CTCAACCTGCCCATTTCGCC 61.938 60.000 0.00 0.00 0.00 5.54
3644 6939 0.817634 CGGTTCAAGCTGGTGGACAA 60.818 55.000 0.00 0.00 0.00 3.18
3814 7109 5.413309 TTTTTATAACCCTACGGACCGAA 57.587 39.130 23.38 0.00 0.00 4.30
3918 7213 7.123098 TGTCCGTTATCTGTTTGTATCTTCCTA 59.877 37.037 0.00 0.00 0.00 2.94
3919 7214 8.142551 GTCCGTTATCTGTTTGTATCTTCCTAT 58.857 37.037 0.00 0.00 0.00 2.57
4031 7327 8.844441 TTAAACAACATTTTCGTAACTTCCTG 57.156 30.769 0.00 0.00 0.00 3.86
4032 7328 5.432885 ACAACATTTTCGTAACTTCCTGG 57.567 39.130 0.00 0.00 0.00 4.45
4033 7329 4.885325 ACAACATTTTCGTAACTTCCTGGT 59.115 37.500 0.00 0.00 0.00 4.00
4034 7330 6.056884 ACAACATTTTCGTAACTTCCTGGTA 58.943 36.000 0.00 0.00 0.00 3.25
4035 7331 6.713450 ACAACATTTTCGTAACTTCCTGGTAT 59.287 34.615 0.00 0.00 0.00 2.73
4036 7332 6.737254 ACATTTTCGTAACTTCCTGGTATG 57.263 37.500 0.00 0.00 0.00 2.39
4037 7333 6.235664 ACATTTTCGTAACTTCCTGGTATGT 58.764 36.000 0.00 0.00 0.00 2.29
4038 7334 6.148811 ACATTTTCGTAACTTCCTGGTATGTG 59.851 38.462 0.00 0.00 0.00 3.21
4039 7335 4.877378 TTCGTAACTTCCTGGTATGTGT 57.123 40.909 0.00 0.00 0.00 3.72
4040 7336 4.182693 TCGTAACTTCCTGGTATGTGTG 57.817 45.455 0.00 0.00 0.00 3.82
4041 7337 3.827876 TCGTAACTTCCTGGTATGTGTGA 59.172 43.478 0.00 0.00 0.00 3.58
4042 7338 4.464951 TCGTAACTTCCTGGTATGTGTGAT 59.535 41.667 0.00 0.00 0.00 3.06
4043 7339 5.653330 TCGTAACTTCCTGGTATGTGTGATA 59.347 40.000 0.00 0.00 0.00 2.15
4044 7340 6.153170 TCGTAACTTCCTGGTATGTGTGATAA 59.847 38.462 0.00 0.00 0.00 1.75
4045 7341 6.255020 CGTAACTTCCTGGTATGTGTGATAAC 59.745 42.308 0.00 0.00 0.00 1.89
4046 7342 6.374417 AACTTCCTGGTATGTGTGATAACT 57.626 37.500 0.00 0.00 0.00 2.24
4047 7343 7.490657 AACTTCCTGGTATGTGTGATAACTA 57.509 36.000 0.00 0.00 0.00 2.24
4048 7344 7.113658 ACTTCCTGGTATGTGTGATAACTAG 57.886 40.000 0.00 0.00 0.00 2.57
4049 7345 6.668283 ACTTCCTGGTATGTGTGATAACTAGT 59.332 38.462 0.00 0.00 0.00 2.57
4050 7346 7.180408 ACTTCCTGGTATGTGTGATAACTAGTT 59.820 37.037 13.68 13.68 0.00 2.24
4051 7347 8.598202 TTCCTGGTATGTGTGATAACTAGTTA 57.402 34.615 17.41 17.41 0.00 2.24
4052 7348 8.777578 TCCTGGTATGTGTGATAACTAGTTAT 57.222 34.615 24.86 24.86 38.38 1.89
4053 7349 8.638873 TCCTGGTATGTGTGATAACTAGTTATG 58.361 37.037 28.61 12.09 36.02 1.90
4054 7350 8.421784 CCTGGTATGTGTGATAACTAGTTATGT 58.578 37.037 28.61 10.38 36.02 2.29
4055 7351 9.817809 CTGGTATGTGTGATAACTAGTTATGTT 57.182 33.333 28.61 9.67 36.02 2.71
4059 7355 8.867112 ATGTGTGATAACTAGTTATGTTACCG 57.133 34.615 28.61 0.00 36.02 4.02
4060 7356 7.829725 TGTGTGATAACTAGTTATGTTACCGT 58.170 34.615 28.61 6.82 36.02 4.83
4061 7357 8.955388 TGTGTGATAACTAGTTATGTTACCGTA 58.045 33.333 28.61 12.43 36.02 4.02
4062 7358 9.956720 GTGTGATAACTAGTTATGTTACCGTAT 57.043 33.333 28.61 6.40 36.02 3.06
4063 7359 9.955208 TGTGATAACTAGTTATGTTACCGTATG 57.045 33.333 28.61 0.00 36.02 2.39
4064 7360 8.909671 GTGATAACTAGTTATGTTACCGTATGC 58.090 37.037 28.61 12.50 36.02 3.14
4065 7361 8.084073 TGATAACTAGTTATGTTACCGTATGCC 58.916 37.037 28.61 12.33 36.02 4.40
4066 7362 6.475596 AACTAGTTATGTTACCGTATGCCT 57.524 37.500 6.26 0.00 0.00 4.75
4067 7363 7.587037 AACTAGTTATGTTACCGTATGCCTA 57.413 36.000 6.26 0.00 0.00 3.93
4068 7364 7.587037 ACTAGTTATGTTACCGTATGCCTAA 57.413 36.000 0.00 0.00 0.00 2.69
4069 7365 8.186709 ACTAGTTATGTTACCGTATGCCTAAT 57.813 34.615 0.00 0.00 0.00 1.73
4070 7366 8.645110 ACTAGTTATGTTACCGTATGCCTAATT 58.355 33.333 0.00 0.00 0.00 1.40
4072 7368 8.822652 AGTTATGTTACCGTATGCCTAATTAC 57.177 34.615 0.00 0.00 0.00 1.89
4073 7369 8.645110 AGTTATGTTACCGTATGCCTAATTACT 58.355 33.333 0.00 0.00 0.00 2.24
4074 7370 8.919661 GTTATGTTACCGTATGCCTAATTACTC 58.080 37.037 0.00 0.00 0.00 2.59
4075 7371 5.522456 TGTTACCGTATGCCTAATTACTCG 58.478 41.667 0.00 0.00 0.00 4.18
4076 7372 3.022607 ACCGTATGCCTAATTACTCGC 57.977 47.619 0.00 0.00 0.00 5.03
4077 7373 2.288640 ACCGTATGCCTAATTACTCGCC 60.289 50.000 0.00 0.00 0.00 5.54
4078 7374 2.288579 CCGTATGCCTAATTACTCGCCA 60.289 50.000 0.00 0.00 0.00 5.69
4079 7375 2.729882 CGTATGCCTAATTACTCGCCAC 59.270 50.000 0.00 0.00 0.00 5.01
4080 7376 3.724374 GTATGCCTAATTACTCGCCACA 58.276 45.455 0.00 0.00 0.00 4.17
4081 7377 3.492102 ATGCCTAATTACTCGCCACAT 57.508 42.857 0.00 0.00 0.00 3.21
4082 7378 2.833794 TGCCTAATTACTCGCCACATC 58.166 47.619 0.00 0.00 0.00 3.06
4083 7379 2.169561 TGCCTAATTACTCGCCACATCA 59.830 45.455 0.00 0.00 0.00 3.07
4084 7380 3.181455 TGCCTAATTACTCGCCACATCAT 60.181 43.478 0.00 0.00 0.00 2.45
4085 7381 3.433615 GCCTAATTACTCGCCACATCATC 59.566 47.826 0.00 0.00 0.00 2.92
4086 7382 4.800914 GCCTAATTACTCGCCACATCATCT 60.801 45.833 0.00 0.00 0.00 2.90
4087 7383 4.687948 CCTAATTACTCGCCACATCATCTG 59.312 45.833 0.00 0.00 0.00 2.90
4088 7384 3.827008 ATTACTCGCCACATCATCTGT 57.173 42.857 0.00 0.00 39.20 3.41
4089 7385 3.610040 TTACTCGCCACATCATCTGTT 57.390 42.857 0.00 0.00 35.29 3.16
4090 7386 2.479566 ACTCGCCACATCATCTGTTT 57.520 45.000 0.00 0.00 35.29 2.83
4091 7387 2.783135 ACTCGCCACATCATCTGTTTT 58.217 42.857 0.00 0.00 35.29 2.43
4092 7388 2.485426 ACTCGCCACATCATCTGTTTTG 59.515 45.455 0.00 0.00 35.29 2.44
4093 7389 2.485426 CTCGCCACATCATCTGTTTTGT 59.515 45.455 0.00 0.00 35.29 2.83
4094 7390 2.483877 TCGCCACATCATCTGTTTTGTC 59.516 45.455 0.00 0.00 35.29 3.18
4095 7391 2.485426 CGCCACATCATCTGTTTTGTCT 59.515 45.455 0.00 0.00 35.29 3.41
4096 7392 3.684305 CGCCACATCATCTGTTTTGTCTA 59.316 43.478 0.00 0.00 35.29 2.59
4097 7393 4.154015 CGCCACATCATCTGTTTTGTCTAA 59.846 41.667 0.00 0.00 35.29 2.10
4098 7394 5.334802 CGCCACATCATCTGTTTTGTCTAAA 60.335 40.000 0.00 0.00 35.29 1.85
4099 7395 6.088824 GCCACATCATCTGTTTTGTCTAAAG 58.911 40.000 0.00 0.00 35.29 1.85
4100 7396 6.088824 CCACATCATCTGTTTTGTCTAAAGC 58.911 40.000 0.00 0.00 35.29 3.51
4101 7397 6.072286 CCACATCATCTGTTTTGTCTAAAGCT 60.072 38.462 0.00 0.00 35.29 3.74
4102 7398 6.800408 CACATCATCTGTTTTGTCTAAAGCTG 59.200 38.462 0.00 0.00 35.29 4.24
4103 7399 6.488006 ACATCATCTGTTTTGTCTAAAGCTGT 59.512 34.615 0.00 0.00 32.90 4.40
4104 7400 6.304356 TCATCTGTTTTGTCTAAAGCTGTG 57.696 37.500 0.00 0.00 31.26 3.66
4105 7401 5.822519 TCATCTGTTTTGTCTAAAGCTGTGT 59.177 36.000 0.00 0.00 31.26 3.72
4106 7402 5.484173 TCTGTTTTGTCTAAAGCTGTGTG 57.516 39.130 0.00 0.00 31.26 3.82
4107 7403 5.182487 TCTGTTTTGTCTAAAGCTGTGTGA 58.818 37.500 0.00 0.00 31.26 3.58
4108 7404 5.822519 TCTGTTTTGTCTAAAGCTGTGTGAT 59.177 36.000 0.00 0.00 31.26 3.06
4109 7405 5.820131 TGTTTTGTCTAAAGCTGTGTGATG 58.180 37.500 0.00 0.00 0.00 3.07
4110 7406 5.356751 TGTTTTGTCTAAAGCTGTGTGATGT 59.643 36.000 0.00 0.00 0.00 3.06
4111 7407 6.127758 TGTTTTGTCTAAAGCTGTGTGATGTT 60.128 34.615 0.00 0.00 0.00 2.71
4112 7408 7.066404 TGTTTTGTCTAAAGCTGTGTGATGTTA 59.934 33.333 0.00 0.00 0.00 2.41
4113 7409 6.539649 TTGTCTAAAGCTGTGTGATGTTAC 57.460 37.500 0.00 0.00 0.00 2.50
4114 7410 4.994852 TGTCTAAAGCTGTGTGATGTTACC 59.005 41.667 0.00 0.00 0.00 2.85
4115 7411 4.994852 GTCTAAAGCTGTGTGATGTTACCA 59.005 41.667 0.00 0.00 0.00 3.25
4116 7412 5.643777 GTCTAAAGCTGTGTGATGTTACCAT 59.356 40.000 0.00 0.00 0.00 3.55
4117 7413 5.874810 TCTAAAGCTGTGTGATGTTACCATC 59.125 40.000 0.00 0.00 46.41 3.51
4118 7414 3.988976 AGCTGTGTGATGTTACCATCT 57.011 42.857 1.69 0.00 46.38 2.90
4119 7415 5.420725 AAGCTGTGTGATGTTACCATCTA 57.579 39.130 1.69 0.00 46.38 1.98
4120 7416 5.620738 AGCTGTGTGATGTTACCATCTAT 57.379 39.130 1.69 0.00 46.38 1.98
4121 7417 5.363101 AGCTGTGTGATGTTACCATCTATG 58.637 41.667 1.69 0.00 46.38 2.23
4122 7418 5.104776 AGCTGTGTGATGTTACCATCTATGT 60.105 40.000 1.69 0.00 46.38 2.29
4123 7419 5.586243 GCTGTGTGATGTTACCATCTATGTT 59.414 40.000 1.69 0.00 46.38 2.71
4124 7420 6.761242 GCTGTGTGATGTTACCATCTATGTTA 59.239 38.462 1.69 0.00 46.38 2.41
4125 7421 7.442364 GCTGTGTGATGTTACCATCTATGTTAT 59.558 37.037 1.69 0.00 46.38 1.89
4126 7422 9.330063 CTGTGTGATGTTACCATCTATGTTATT 57.670 33.333 1.69 0.00 46.38 1.40
4127 7423 9.325198 TGTGTGATGTTACCATCTATGTTATTC 57.675 33.333 1.69 0.00 46.38 1.75
4128 7424 9.547753 GTGTGATGTTACCATCTATGTTATTCT 57.452 33.333 1.69 0.00 46.38 2.40
4129 7425 9.764363 TGTGATGTTACCATCTATGTTATTCTC 57.236 33.333 1.69 0.00 46.38 2.87
4130 7426 9.764363 GTGATGTTACCATCTATGTTATTCTCA 57.236 33.333 1.69 0.00 46.38 3.27
4131 7427 9.764363 TGATGTTACCATCTATGTTATTCTCAC 57.236 33.333 1.69 0.00 46.38 3.51
4132 7428 9.988815 GATGTTACCATCTATGTTATTCTCACT 57.011 33.333 0.00 0.00 43.49 3.41
4133 7429 9.770097 ATGTTACCATCTATGTTATTCTCACTG 57.230 33.333 0.00 0.00 0.00 3.66
4134 7430 8.758829 TGTTACCATCTATGTTATTCTCACTGT 58.241 33.333 0.00 0.00 0.00 3.55
4137 7433 7.957002 ACCATCTATGTTATTCTCACTGTAGG 58.043 38.462 0.00 0.00 0.00 3.18
4138 7434 7.565398 ACCATCTATGTTATTCTCACTGTAGGT 59.435 37.037 0.00 0.00 0.00 3.08
4139 7435 9.078990 CCATCTATGTTATTCTCACTGTAGGTA 57.921 37.037 0.00 0.00 0.00 3.08
4149 7445 8.824756 ATTCTCACTGTAGGTAATCTAAGTGA 57.175 34.615 3.56 3.56 40.07 3.41
4150 7446 8.824756 TTCTCACTGTAGGTAATCTAAGTGAT 57.175 34.615 3.98 0.00 40.67 3.06
4151 7447 9.916360 TTCTCACTGTAGGTAATCTAAGTGATA 57.084 33.333 3.98 0.00 40.67 2.15
4152 7448 9.916360 TCTCACTGTAGGTAATCTAAGTGATAA 57.084 33.333 3.98 0.00 40.67 1.75
4153 7449 9.953697 CTCACTGTAGGTAATCTAAGTGATAAC 57.046 37.037 3.98 0.00 40.67 1.89
4154 7450 9.470399 TCACTGTAGGTAATCTAAGTGATAACA 57.530 33.333 0.00 0.00 38.97 2.41
4211 7507 9.118300 AGTAATTAATGATGAAAGAGAGGCAAG 57.882 33.333 0.00 0.00 0.00 4.01
4212 7508 7.951347 AATTAATGATGAAAGAGAGGCAAGT 57.049 32.000 0.00 0.00 0.00 3.16
4214 7510 9.466497 AATTAATGATGAAAGAGAGGCAAGTAA 57.534 29.630 0.00 0.00 0.00 2.24
4215 7511 9.638176 ATTAATGATGAAAGAGAGGCAAGTAAT 57.362 29.630 0.00 0.00 0.00 1.89
4218 7514 7.849804 TGATGAAAGAGAGGCAAGTAATAAC 57.150 36.000 0.00 0.00 0.00 1.89
4219 7515 7.394016 TGATGAAAGAGAGGCAAGTAATAACA 58.606 34.615 0.00 0.00 0.00 2.41
4220 7516 8.049117 TGATGAAAGAGAGGCAAGTAATAACAT 58.951 33.333 0.00 0.00 0.00 2.71
4221 7517 9.547753 GATGAAAGAGAGGCAAGTAATAACATA 57.452 33.333 0.00 0.00 0.00 2.29
4222 7518 8.948631 TGAAAGAGAGGCAAGTAATAACATAG 57.051 34.615 0.00 0.00 0.00 2.23
4223 7519 7.495934 TGAAAGAGAGGCAAGTAATAACATAGC 59.504 37.037 0.00 0.00 0.00 2.97
4224 7520 6.739331 AGAGAGGCAAGTAATAACATAGCT 57.261 37.500 0.00 0.00 0.00 3.32
4225 7521 7.841282 AGAGAGGCAAGTAATAACATAGCTA 57.159 36.000 0.00 0.00 0.00 3.32
4226 7522 7.891561 AGAGAGGCAAGTAATAACATAGCTAG 58.108 38.462 0.00 0.00 0.00 3.42
4227 7523 7.507616 AGAGAGGCAAGTAATAACATAGCTAGT 59.492 37.037 0.00 0.00 0.00 2.57
4228 7524 8.024145 AGAGGCAAGTAATAACATAGCTAGTT 57.976 34.615 0.00 6.69 0.00 2.24
4229 7525 9.144298 AGAGGCAAGTAATAACATAGCTAGTTA 57.856 33.333 14.23 14.23 36.06 2.24
4230 7526 9.194271 GAGGCAAGTAATAACATAGCTAGTTAC 57.806 37.037 14.19 10.61 34.59 2.50
4231 7527 8.925338 AGGCAAGTAATAACATAGCTAGTTACT 58.075 33.333 14.19 12.09 34.59 2.24
4242 7538 8.638629 ACATAGCTAGTTACTAGTTCTATGGG 57.361 38.462 29.16 17.68 39.12 4.00
4243 7539 8.226112 ACATAGCTAGTTACTAGTTCTATGGGT 58.774 37.037 29.16 18.10 39.12 4.51
4244 7540 9.736414 CATAGCTAGTTACTAGTTCTATGGGTA 57.264 37.037 24.03 10.27 35.69 3.69
4254 7550 8.777578 ACTAGTTCTATGGGTAATATCACACA 57.222 34.615 0.00 0.00 35.98 3.72
4255 7551 9.381038 ACTAGTTCTATGGGTAATATCACACAT 57.619 33.333 0.00 0.00 44.66 3.21
4303 7600 2.158755 CCCATGGACCCAACTACATCTC 60.159 54.545 15.22 0.00 0.00 2.75
4304 7601 2.774234 CCATGGACCCAACTACATCTCT 59.226 50.000 5.56 0.00 0.00 3.10
4331 7628 0.692476 CCTCTTGGACCCATGACACA 59.308 55.000 0.00 0.00 34.57 3.72
4380 7686 4.594920 TCTCTCCTCTCACAATTCCACTTT 59.405 41.667 0.00 0.00 0.00 2.66
4414 7720 4.525487 AGACATGGTTACTACCTCAAACGA 59.475 41.667 0.00 0.00 45.27 3.85
4434 7740 4.814234 ACGAAGATGTTTTGTGTGCTTAGA 59.186 37.500 0.00 0.00 0.00 2.10
4443 7749 3.627395 TGTGTGCTTAGATACCAAGGG 57.373 47.619 0.00 0.00 0.00 3.95
4452 7758 1.294068 AGATACCAAGGGACCAGCCTA 59.706 52.381 0.00 0.00 36.66 3.93
4478 7784 1.725557 GCTACGGAGCGAGATGGACA 61.726 60.000 2.50 0.00 39.39 4.02
4487 7793 1.472201 GCGAGATGGACATCAAGAGCA 60.472 52.381 14.16 0.00 40.22 4.26
4526 7851 0.747283 CCAGGACGAGCGGTACTACT 60.747 60.000 0.00 0.00 37.91 2.57
4561 7905 3.909285 GGTACTACCGCCGGGCTC 61.909 72.222 18.34 0.00 36.48 4.70
4609 7953 0.478072 TCCCTGTGTTTGCATGACCT 59.522 50.000 0.00 0.00 0.00 3.85
4620 7964 1.696097 GCATGACCTGGGTCCGGTAT 61.696 60.000 16.07 1.51 43.97 2.73
4711 8073 1.151677 TAGGGCCCATGTATCCCCC 60.152 63.158 27.56 3.62 40.97 5.40
4722 8084 4.166144 CCATGTATCCCCCTTTCACTTACT 59.834 45.833 0.00 0.00 0.00 2.24
4746 8108 9.132923 ACTCTTTCGTGGATTCAGACTATATAA 57.867 33.333 0.00 0.00 0.00 0.98
4762 8124 6.644882 ACTATATAAACTCCCCCTCATCCTT 58.355 40.000 0.00 0.00 0.00 3.36
4790 8152 2.158460 AGGGTCAGCAAAGGTTTAGCTT 60.158 45.455 0.00 0.00 36.26 3.74
4791 8153 3.073946 AGGGTCAGCAAAGGTTTAGCTTA 59.926 43.478 0.00 0.00 36.26 3.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.811954 TCTCCAAACAAAGGAAACAATTACC 58.188 36.000 0.00 0.00 34.08 2.85
1 2 8.764287 CAATCTCCAAACAAAGGAAACAATTAC 58.236 33.333 0.00 0.00 34.08 1.89
32 33 1.015109 CTAGCTTAGCTCACGGACGA 58.985 55.000 11.09 0.00 40.44 4.20
64 65 8.267620 TCAATTCACGTATCACAATCAGATTT 57.732 30.769 0.00 0.00 0.00 2.17
107 108 9.454859 TCAATTTTCAAATACCAAAACCAAACT 57.545 25.926 0.00 0.00 0.00 2.66
256 257 0.813821 GCTGGTTTTCTCATCTGGCC 59.186 55.000 0.00 0.00 0.00 5.36
283 284 0.772124 TTTTCCTGCCTCCCTCCACT 60.772 55.000 0.00 0.00 0.00 4.00
303 304 0.533951 GACCGTTACCCCTTCATCGT 59.466 55.000 0.00 0.00 0.00 3.73
306 307 1.478105 GTACGACCGTTACCCCTTCAT 59.522 52.381 0.00 0.00 0.00 2.57
545 548 6.604396 ACATATCAGAATTTTCCATGCTGACA 59.396 34.615 0.00 0.00 38.30 3.58
596 600 7.639209 TTTTATCGATTTATTTTCGCGTCAC 57.361 32.000 5.77 0.00 36.56 3.67
612 616 4.994907 TCTCGTTCCCTCATTTTATCGA 57.005 40.909 0.00 0.00 0.00 3.59
617 621 6.901081 AGATTTTTCTCGTTCCCTCATTTT 57.099 33.333 0.00 0.00 0.00 1.82
618 622 7.996098 TTAGATTTTTCTCGTTCCCTCATTT 57.004 32.000 0.00 0.00 0.00 2.32
619 623 7.996098 TTTAGATTTTTCTCGTTCCCTCATT 57.004 32.000 0.00 0.00 0.00 2.57
620 624 7.996098 TTTTAGATTTTTCTCGTTCCCTCAT 57.004 32.000 0.00 0.00 0.00 2.90
621 625 7.811117 TTTTTAGATTTTTCTCGTTCCCTCA 57.189 32.000 0.00 0.00 0.00 3.86
654 658 5.656416 TCACCTCTCATTTTCACTGGTTTTT 59.344 36.000 0.00 0.00 0.00 1.94
655 659 5.200483 TCACCTCTCATTTTCACTGGTTTT 58.800 37.500 0.00 0.00 0.00 2.43
656 660 4.792068 TCACCTCTCATTTTCACTGGTTT 58.208 39.130 0.00 0.00 0.00 3.27
657 661 4.103153 TCTCACCTCTCATTTTCACTGGTT 59.897 41.667 0.00 0.00 0.00 3.67
658 662 3.648067 TCTCACCTCTCATTTTCACTGGT 59.352 43.478 0.00 0.00 0.00 4.00
659 663 3.999663 GTCTCACCTCTCATTTTCACTGG 59.000 47.826 0.00 0.00 0.00 4.00
660 664 3.677121 CGTCTCACCTCTCATTTTCACTG 59.323 47.826 0.00 0.00 0.00 3.66
661 665 3.574396 TCGTCTCACCTCTCATTTTCACT 59.426 43.478 0.00 0.00 0.00 3.41
662 666 3.914312 TCGTCTCACCTCTCATTTTCAC 58.086 45.455 0.00 0.00 0.00 3.18
663 667 4.600692 TTCGTCTCACCTCTCATTTTCA 57.399 40.909 0.00 0.00 0.00 2.69
664 668 5.924475 TTTTCGTCTCACCTCTCATTTTC 57.076 39.130 0.00 0.00 0.00 2.29
693 697 2.538449 CTCGTTGATAATCCCCGTTTCG 59.462 50.000 0.00 0.00 0.00 3.46
694 698 3.528532 ACTCGTTGATAATCCCCGTTTC 58.471 45.455 0.00 0.00 0.00 2.78
695 699 3.622166 ACTCGTTGATAATCCCCGTTT 57.378 42.857 0.00 0.00 0.00 3.60
696 700 3.703052 AGTACTCGTTGATAATCCCCGTT 59.297 43.478 0.00 0.00 0.00 4.44
697 701 3.294214 AGTACTCGTTGATAATCCCCGT 58.706 45.455 0.00 0.00 0.00 5.28
698 702 4.202080 TGAAGTACTCGTTGATAATCCCCG 60.202 45.833 0.00 0.00 0.00 5.73
699 703 5.272283 TGAAGTACTCGTTGATAATCCCC 57.728 43.478 0.00 0.00 0.00 4.81
700 704 8.926710 CATAATGAAGTACTCGTTGATAATCCC 58.073 37.037 0.00 0.00 34.91 3.85
701 705 9.692749 TCATAATGAAGTACTCGTTGATAATCC 57.307 33.333 0.00 0.00 34.91 3.01
706 710 9.121658 TCTACTCATAATGAAGTACTCGTTGAT 57.878 33.333 0.00 0.00 34.91 2.57
707 711 8.502105 TCTACTCATAATGAAGTACTCGTTGA 57.498 34.615 0.00 0.00 34.91 3.18
708 712 8.613482 TCTCTACTCATAATGAAGTACTCGTTG 58.387 37.037 0.00 0.00 34.91 4.10
709 713 8.734218 TCTCTACTCATAATGAAGTACTCGTT 57.266 34.615 0.00 0.68 37.11 3.85
710 714 8.911918 ATCTCTACTCATAATGAAGTACTCGT 57.088 34.615 0.00 0.00 0.00 4.18
726 730 9.040939 GCTGAAATCTTTCCTTAATCTCTACTC 57.959 37.037 0.48 0.00 36.36 2.59
727 731 7.708752 CGCTGAAATCTTTCCTTAATCTCTACT 59.291 37.037 0.48 0.00 36.36 2.57
728 732 7.042389 CCGCTGAAATCTTTCCTTAATCTCTAC 60.042 40.741 0.48 0.00 36.36 2.59
729 733 6.986817 CCGCTGAAATCTTTCCTTAATCTCTA 59.013 38.462 0.48 0.00 36.36 2.43
730 734 5.819901 CCGCTGAAATCTTTCCTTAATCTCT 59.180 40.000 0.48 0.00 36.36 3.10
731 735 5.008118 CCCGCTGAAATCTTTCCTTAATCTC 59.992 44.000 0.48 0.00 36.36 2.75
732 736 4.884164 CCCGCTGAAATCTTTCCTTAATCT 59.116 41.667 0.48 0.00 36.36 2.40
733 737 4.881850 TCCCGCTGAAATCTTTCCTTAATC 59.118 41.667 0.48 0.00 36.36 1.75
734 738 4.640647 GTCCCGCTGAAATCTTTCCTTAAT 59.359 41.667 0.48 0.00 36.36 1.40
735 739 4.007659 GTCCCGCTGAAATCTTTCCTTAA 58.992 43.478 0.48 0.00 36.36 1.85
736 740 3.606687 GTCCCGCTGAAATCTTTCCTTA 58.393 45.455 0.48 0.00 36.36 2.69
737 741 2.437413 GTCCCGCTGAAATCTTTCCTT 58.563 47.619 0.48 0.00 36.36 3.36
738 742 1.340114 GGTCCCGCTGAAATCTTTCCT 60.340 52.381 0.48 0.00 36.36 3.36
739 743 1.095600 GGTCCCGCTGAAATCTTTCC 58.904 55.000 0.48 0.00 36.36 3.13
740 744 1.095600 GGGTCCCGCTGAAATCTTTC 58.904 55.000 0.00 0.00 37.69 2.62
741 745 0.323451 GGGGTCCCGCTGAAATCTTT 60.323 55.000 0.48 0.00 0.00 2.52
742 746 1.303282 GGGGTCCCGCTGAAATCTT 59.697 57.895 0.48 0.00 0.00 2.40
743 747 2.680370 GGGGGTCCCGCTGAAATCT 61.680 63.158 17.76 0.00 36.85 2.40
744 748 2.124278 GGGGGTCCCGCTGAAATC 60.124 66.667 17.76 0.00 36.85 2.17
753 757 3.961414 TTGCGTTGAGGGGGTCCC 61.961 66.667 0.00 0.00 45.90 4.46
754 758 2.671963 GTTGCGTTGAGGGGGTCC 60.672 66.667 0.00 0.00 0.00 4.46
755 759 3.047877 CGTTGCGTTGAGGGGGTC 61.048 66.667 0.00 0.00 0.00 4.46
760 764 4.025401 GTGGGCGTTGCGTTGAGG 62.025 66.667 0.00 0.00 0.00 3.86
761 765 4.025401 GGTGGGCGTTGCGTTGAG 62.025 66.667 0.00 0.00 0.00 3.02
762 766 4.555709 AGGTGGGCGTTGCGTTGA 62.556 61.111 0.00 0.00 0.00 3.18
763 767 4.326766 CAGGTGGGCGTTGCGTTG 62.327 66.667 0.00 0.00 0.00 4.10
764 768 4.868116 ACAGGTGGGCGTTGCGTT 62.868 61.111 0.00 0.00 0.00 4.84
767 771 3.660111 GTGACAGGTGGGCGTTGC 61.660 66.667 0.00 0.00 0.00 4.17
768 772 2.111043 AGTGACAGGTGGGCGTTG 59.889 61.111 0.00 0.00 0.00 4.10
769 773 2.111043 CAGTGACAGGTGGGCGTT 59.889 61.111 0.00 0.00 0.00 4.84
770 774 2.842462 TCAGTGACAGGTGGGCGT 60.842 61.111 0.00 0.00 0.00 5.68
771 775 2.357517 GTCAGTGACAGGTGGGCG 60.358 66.667 18.54 0.00 32.09 6.13
772 776 2.032681 GGTCAGTGACAGGTGGGC 59.967 66.667 24.20 1.73 33.68 5.36
773 777 2.343758 CGGTCAGTGACAGGTGGG 59.656 66.667 24.20 2.93 33.68 4.61
774 778 1.006102 GACGGTCAGTGACAGGTGG 60.006 63.158 24.37 10.99 33.68 4.61
775 779 1.006102 GGACGGTCAGTGACAGGTG 60.006 63.158 24.37 13.63 33.68 4.00
776 780 2.561956 CGGACGGTCAGTGACAGGT 61.562 63.158 24.37 20.31 33.68 4.00
989 1003 1.291877 GAAATCCATCGCCGATCCCG 61.292 60.000 0.00 0.00 0.00 5.14
1025 1039 1.380515 TCCCTCTCCAGCTTCTCCG 60.381 63.158 0.00 0.00 0.00 4.63
1285 2708 8.293867 CGGAGGACAAAATTAAACTTGTAATCA 58.706 33.333 5.73 0.00 35.93 2.57
1349 2772 5.572066 CGAGGGTTTCCTTTCTGGGTTTATA 60.572 44.000 0.00 0.00 45.05 0.98
1350 2773 4.673968 GAGGGTTTCCTTTCTGGGTTTAT 58.326 43.478 0.00 0.00 45.05 1.40
1487 2914 3.756117 GAAGTGGTTGGGAGTCAAGATT 58.244 45.455 0.00 0.00 35.80 2.40
1492 2919 1.752198 CCGAAGTGGTTGGGAGTCA 59.248 57.895 0.00 0.00 33.38 3.41
1510 2937 2.100197 GACAAGGCCCCAAAGGATTAC 58.900 52.381 0.00 0.00 38.24 1.89
1714 3154 6.256321 GTGCTTCAAACATGTGTGAAAAAGAT 59.744 34.615 27.34 0.00 33.52 2.40
1780 3220 7.495934 TGATCGGATAAATCCTTGAAAGAAGAC 59.504 37.037 7.39 0.00 44.93 3.01
1871 3311 0.820871 GCGTCTTGATCTGGAGAGGT 59.179 55.000 12.30 0.00 32.07 3.85
2237 3677 5.624159 TGGTCTCTCAATGTCAACTTCAAT 58.376 37.500 0.00 0.00 0.00 2.57
2255 3695 4.336889 TGTCGAAAACTGAATCTGGTCT 57.663 40.909 0.00 0.00 0.00 3.85
2450 3890 8.950210 CCTTGAAACATAAATATCAGTGTCACT 58.050 33.333 0.00 0.00 28.52 3.41
2591 4031 2.295070 CCTTGAAACCGTAAACCCCAAG 59.705 50.000 0.00 0.00 0.00 3.61
2642 4082 6.942532 TTGGCTATCAATAACATCCTTGAC 57.057 37.500 0.00 0.00 34.43 3.18
2673 4113 1.644509 TGACACACTACCCTGCTCAT 58.355 50.000 0.00 0.00 0.00 2.90
3009 6275 5.938438 AGAGCTGAAAAGTTCATCTGTTC 57.062 39.130 0.00 0.00 36.36 3.18
3137 6403 5.576447 AACCAAACAGTGAACTAACCTTG 57.424 39.130 0.00 0.00 0.00 3.61
3150 6416 4.589908 AGGTATGGCTAGAAACCAAACAG 58.410 43.478 0.00 0.00 41.49 3.16
3151 6417 4.650972 AGGTATGGCTAGAAACCAAACA 57.349 40.909 0.00 0.00 41.49 2.83
3152 6418 4.380550 GCAAGGTATGGCTAGAAACCAAAC 60.381 45.833 0.00 0.00 41.49 2.93
3153 6419 3.761752 GCAAGGTATGGCTAGAAACCAAA 59.238 43.478 0.00 0.00 41.49 3.28
3154 6420 3.352648 GCAAGGTATGGCTAGAAACCAA 58.647 45.455 0.00 0.00 41.49 3.67
3155 6421 2.999331 GCAAGGTATGGCTAGAAACCA 58.001 47.619 0.00 0.00 42.61 3.67
3166 6432 2.884012 TGACAAAGTGTGGCAAGGTATG 59.116 45.455 0.00 0.00 44.65 2.39
3168 6434 2.719531 TGACAAAGTGTGGCAAGGTA 57.280 45.000 0.00 0.00 44.65 3.08
3169 6435 3.586843 TGACAAAGTGTGGCAAGGT 57.413 47.368 0.00 0.00 44.65 3.50
3184 6467 5.140747 AGTTGACTAAGGTGAGATGTGAC 57.859 43.478 0.00 0.00 0.00 3.67
3186 6469 5.991606 TCAAAGTTGACTAAGGTGAGATGTG 59.008 40.000 0.00 0.00 31.01 3.21
3187 6470 6.174720 TCAAAGTTGACTAAGGTGAGATGT 57.825 37.500 0.00 0.00 31.01 3.06
3205 6488 2.884639 CACCCACCTAACTTGGTCAAAG 59.115 50.000 0.00 0.00 38.45 2.77
3206 6489 2.242708 ACACCCACCTAACTTGGTCAAA 59.757 45.455 0.00 0.00 38.45 2.69
3207 6490 1.847737 ACACCCACCTAACTTGGTCAA 59.152 47.619 0.00 0.00 38.45 3.18
3208 6491 1.513858 ACACCCACCTAACTTGGTCA 58.486 50.000 0.00 0.00 38.45 4.02
3209 6492 2.621526 CAAACACCCACCTAACTTGGTC 59.378 50.000 0.00 0.00 38.45 4.02
3210 6493 2.661718 CAAACACCCACCTAACTTGGT 58.338 47.619 0.00 0.00 41.77 3.67
3211 6494 1.960689 CCAAACACCCACCTAACTTGG 59.039 52.381 0.00 0.00 0.00 3.61
3212 6495 2.661718 ACCAAACACCCACCTAACTTG 58.338 47.619 0.00 0.00 0.00 3.16
3213 6496 3.053170 AGAACCAAACACCCACCTAACTT 60.053 43.478 0.00 0.00 0.00 2.66
3214 6497 2.512476 AGAACCAAACACCCACCTAACT 59.488 45.455 0.00 0.00 0.00 2.24
3215 6498 2.940158 AGAACCAAACACCCACCTAAC 58.060 47.619 0.00 0.00 0.00 2.34
3216 6499 3.497227 GCTAGAACCAAACACCCACCTAA 60.497 47.826 0.00 0.00 0.00 2.69
3217 6500 2.039348 GCTAGAACCAAACACCCACCTA 59.961 50.000 0.00 0.00 0.00 3.08
3218 6501 1.202891 GCTAGAACCAAACACCCACCT 60.203 52.381 0.00 0.00 0.00 4.00
3219 6502 1.244816 GCTAGAACCAAACACCCACC 58.755 55.000 0.00 0.00 0.00 4.61
3220 6503 1.244816 GGCTAGAACCAAACACCCAC 58.755 55.000 0.00 0.00 0.00 4.61
3221 6504 0.847373 TGGCTAGAACCAAACACCCA 59.153 50.000 0.00 0.00 36.55 4.51
3222 6505 1.244816 GTGGCTAGAACCAAACACCC 58.755 55.000 0.00 0.00 42.70 4.61
3223 6506 1.607148 GTGTGGCTAGAACCAAACACC 59.393 52.381 5.14 0.00 45.87 4.16
3226 6509 2.271944 AGGTGTGGCTAGAACCAAAC 57.728 50.000 0.00 0.00 45.86 2.93
3227 6510 3.244770 CCTAAGGTGTGGCTAGAACCAAA 60.245 47.826 0.00 0.00 42.70 3.28
3228 6511 2.304761 CCTAAGGTGTGGCTAGAACCAA 59.695 50.000 0.00 0.00 42.70 3.67
3229 6512 1.906574 CCTAAGGTGTGGCTAGAACCA 59.093 52.381 0.00 0.00 36.37 3.67
3230 6513 1.407025 GCCTAAGGTGTGGCTAGAACC 60.407 57.143 0.00 0.00 45.26 3.62
3231 6514 2.025589 GCCTAAGGTGTGGCTAGAAC 57.974 55.000 0.00 0.00 45.26 3.01
3238 6521 6.530019 AAATAATTCTTGCCTAAGGTGTGG 57.470 37.500 0.00 0.00 34.59 4.17
3247 6530 9.189156 TCACTGCTTATAAAATAATTCTTGCCT 57.811 29.630 0.00 0.00 0.00 4.75
3248 6531 9.801873 TTCACTGCTTATAAAATAATTCTTGCC 57.198 29.630 0.00 0.00 0.00 4.52
3252 6535 8.914011 GGGGTTCACTGCTTATAAAATAATTCT 58.086 33.333 0.00 0.00 0.00 2.40
3253 6536 8.691797 TGGGGTTCACTGCTTATAAAATAATTC 58.308 33.333 0.00 0.00 0.00 2.17
3254 6537 8.474831 GTGGGGTTCACTGCTTATAAAATAATT 58.525 33.333 0.00 0.00 42.86 1.40
3255 6538 7.617723 TGTGGGGTTCACTGCTTATAAAATAAT 59.382 33.333 0.00 0.00 46.20 1.28
3256 6539 6.948886 TGTGGGGTTCACTGCTTATAAAATAA 59.051 34.615 0.00 0.00 46.20 1.40
3257 6540 6.486056 TGTGGGGTTCACTGCTTATAAAATA 58.514 36.000 0.00 0.00 46.20 1.40
3258 6541 5.329399 TGTGGGGTTCACTGCTTATAAAAT 58.671 37.500 0.00 0.00 46.20 1.82
3259 6542 4.730966 TGTGGGGTTCACTGCTTATAAAA 58.269 39.130 0.00 0.00 46.20 1.52
3260 6543 4.374689 TGTGGGGTTCACTGCTTATAAA 57.625 40.909 0.00 0.00 46.20 1.40
3261 6544 4.263727 ACATGTGGGGTTCACTGCTTATAA 60.264 41.667 0.00 0.00 46.20 0.98
3262 6545 3.265737 ACATGTGGGGTTCACTGCTTATA 59.734 43.478 0.00 0.00 46.20 0.98
3263 6546 2.041620 ACATGTGGGGTTCACTGCTTAT 59.958 45.455 0.00 0.00 46.20 1.73
3264 6547 1.423541 ACATGTGGGGTTCACTGCTTA 59.576 47.619 0.00 0.00 46.20 3.09
3265 6548 0.185901 ACATGTGGGGTTCACTGCTT 59.814 50.000 0.00 0.00 46.20 3.91
3266 6549 0.250901 GACATGTGGGGTTCACTGCT 60.251 55.000 1.15 0.00 46.20 4.24
3267 6550 0.537143 TGACATGTGGGGTTCACTGC 60.537 55.000 1.15 0.00 46.20 4.40
3268 6551 2.205022 ATGACATGTGGGGTTCACTG 57.795 50.000 1.15 0.00 46.20 3.66
3269 6552 2.642311 TGTATGACATGTGGGGTTCACT 59.358 45.455 1.15 0.00 46.20 3.41
3270 6553 2.747446 GTGTATGACATGTGGGGTTCAC 59.253 50.000 1.15 1.55 46.23 3.18
3271 6554 2.373502 TGTGTATGACATGTGGGGTTCA 59.626 45.455 1.15 0.00 0.00 3.18
3272 6555 2.747446 GTGTGTATGACATGTGGGGTTC 59.253 50.000 1.15 0.00 36.78 3.62
3273 6556 2.107378 TGTGTGTATGACATGTGGGGTT 59.893 45.455 1.15 0.00 36.78 4.11
3274 6557 1.702401 TGTGTGTATGACATGTGGGGT 59.298 47.619 1.15 0.00 36.78 4.95
3275 6558 2.488204 TGTGTGTATGACATGTGGGG 57.512 50.000 1.15 0.00 36.78 4.96
3276 6559 4.844998 TTTTGTGTGTATGACATGTGGG 57.155 40.909 1.15 0.00 36.78 4.61
3277 6560 5.686841 CACTTTTTGTGTGTATGACATGTGG 59.313 40.000 1.15 0.00 41.53 4.17
3278 6561 6.736807 CACTTTTTGTGTGTATGACATGTG 57.263 37.500 1.15 0.00 41.53 3.21
3292 6575 3.944650 GGGAATTTTGCCACACTTTTTGT 59.055 39.130 0.00 0.00 39.97 2.83
3293 6576 4.198530 AGGGAATTTTGCCACACTTTTTG 58.801 39.130 3.58 0.00 41.75 2.44
3294 6577 4.502105 AGGGAATTTTGCCACACTTTTT 57.498 36.364 3.58 0.00 41.75 1.94
3295 6578 4.502105 AAGGGAATTTTGCCACACTTTT 57.498 36.364 3.58 0.00 41.75 2.27
3296 6579 4.040339 CCTAAGGGAATTTTGCCACACTTT 59.960 41.667 3.58 0.00 41.75 2.66
3297 6580 3.578282 CCTAAGGGAATTTTGCCACACTT 59.422 43.478 3.58 0.00 41.75 3.16
3298 6581 3.165071 CCTAAGGGAATTTTGCCACACT 58.835 45.455 3.58 0.00 41.75 3.55
3299 6582 2.353704 GCCTAAGGGAATTTTGCCACAC 60.354 50.000 3.58 0.00 41.75 3.82
3300 6583 1.899142 GCCTAAGGGAATTTTGCCACA 59.101 47.619 3.58 0.00 41.75 4.17
3301 6584 1.899142 TGCCTAAGGGAATTTTGCCAC 59.101 47.619 3.58 0.00 41.75 5.01
3302 6585 2.317371 TGCCTAAGGGAATTTTGCCA 57.683 45.000 3.58 0.00 41.75 4.92
3303 6586 2.677902 GCTTGCCTAAGGGAATTTTGCC 60.678 50.000 0.00 0.00 39.23 4.52
3304 6587 2.621338 GCTTGCCTAAGGGAATTTTGC 58.379 47.619 0.00 0.00 31.43 3.68
3305 6588 2.566724 TGGCTTGCCTAAGGGAATTTTG 59.433 45.455 13.18 0.00 31.43 2.44
3306 6589 2.901291 TGGCTTGCCTAAGGGAATTTT 58.099 42.857 13.18 0.00 31.43 1.82
3307 6590 2.621556 TGGCTTGCCTAAGGGAATTT 57.378 45.000 13.18 0.00 31.43 1.82
3308 6591 2.621556 TTGGCTTGCCTAAGGGAATT 57.378 45.000 13.18 0.00 31.43 2.17
3309 6592 2.225369 ACTTTGGCTTGCCTAAGGGAAT 60.225 45.455 28.97 13.21 31.43 3.01
3310 6593 1.146982 ACTTTGGCTTGCCTAAGGGAA 59.853 47.619 28.97 7.95 34.40 3.97
3311 6594 0.777446 ACTTTGGCTTGCCTAAGGGA 59.223 50.000 28.97 2.46 34.40 4.20
3312 6595 0.890683 CACTTTGGCTTGCCTAAGGG 59.109 55.000 28.97 24.82 34.40 3.95
3313 6596 1.270550 CACACTTTGGCTTGCCTAAGG 59.729 52.381 28.97 22.12 34.40 2.69
3314 6597 1.270550 CCACACTTTGGCTTGCCTAAG 59.729 52.381 25.92 25.92 39.07 2.18
3315 6598 1.327303 CCACACTTTGGCTTGCCTAA 58.673 50.000 13.18 10.47 39.07 2.69
3316 6599 3.034924 CCACACTTTGGCTTGCCTA 57.965 52.632 13.18 2.12 39.07 3.93
3317 6600 3.860681 CCACACTTTGGCTTGCCT 58.139 55.556 13.18 0.00 39.07 4.75
3326 6609 4.099266 TGCTCAAATTGTTAGCCACACTTT 59.901 37.500 4.54 0.00 38.47 2.66
3343 6626 3.207265 TGCCTTACTTGAGTTGCTCAA 57.793 42.857 10.61 10.61 46.50 3.02
3344 6627 2.928801 TGCCTTACTTGAGTTGCTCA 57.071 45.000 0.00 0.00 38.87 4.26
3346 6629 2.880890 CACTTGCCTTACTTGAGTTGCT 59.119 45.455 0.00 0.00 0.00 3.91
3348 6631 3.003689 CCACACTTGCCTTACTTGAGTTG 59.996 47.826 0.00 0.00 0.00 3.16
3349 6632 3.214328 CCACACTTGCCTTACTTGAGTT 58.786 45.455 0.00 0.00 0.00 3.01
3350 6633 2.851195 CCACACTTGCCTTACTTGAGT 58.149 47.619 0.00 0.00 0.00 3.41
3353 6636 1.317613 TGCCACACTTGCCTTACTTG 58.682 50.000 0.00 0.00 0.00 3.16
3354 6637 1.956477 CTTGCCACACTTGCCTTACTT 59.044 47.619 0.00 0.00 0.00 2.24
3356 6639 1.001378 CACTTGCCACACTTGCCTTAC 60.001 52.381 0.00 0.00 0.00 2.34
3357 6640 1.317613 CACTTGCCACACTTGCCTTA 58.682 50.000 0.00 0.00 0.00 2.69
3358 6641 0.684153 ACACTTGCCACACTTGCCTT 60.684 50.000 0.00 0.00 0.00 4.35
3360 6643 1.066257 CACACTTGCCACACTTGCC 59.934 57.895 0.00 0.00 0.00 4.52
3361 6644 1.066257 CCACACTTGCCACACTTGC 59.934 57.895 0.00 0.00 0.00 4.01
3364 6647 0.969917 TTTGCCACACTTGCCACACT 60.970 50.000 0.00 0.00 0.00 3.55
3365 6648 0.108424 TTTTGCCACACTTGCCACAC 60.108 50.000 0.00 0.00 0.00 3.82
3366 6649 0.610174 TTTTTGCCACACTTGCCACA 59.390 45.000 0.00 0.00 0.00 4.17
3367 6650 1.952193 ATTTTTGCCACACTTGCCAC 58.048 45.000 0.00 0.00 0.00 5.01
3368 6651 3.827008 TTATTTTTGCCACACTTGCCA 57.173 38.095 0.00 0.00 0.00 4.92
3369 6652 5.294060 CCATATTATTTTTGCCACACTTGCC 59.706 40.000 0.00 0.00 0.00 4.52
3370 6653 5.220643 GCCATATTATTTTTGCCACACTTGC 60.221 40.000 0.00 0.00 0.00 4.01
3371 6654 5.873712 TGCCATATTATTTTTGCCACACTTG 59.126 36.000 0.00 0.00 0.00 3.16
3373 6656 5.674052 TGCCATATTATTTTTGCCACACT 57.326 34.783 0.00 0.00 0.00 3.55
3374 6657 5.641209 TGTTGCCATATTATTTTTGCCACAC 59.359 36.000 0.00 0.00 0.00 3.82
3377 6660 7.660617 CCATATGTTGCCATATTATTTTTGCCA 59.339 33.333 1.24 0.00 41.35 4.92
3378 6661 7.361116 GCCATATGTTGCCATATTATTTTTGCC 60.361 37.037 1.24 0.00 41.35 4.52
3379 6662 7.172875 TGCCATATGTTGCCATATTATTTTTGC 59.827 33.333 1.24 0.00 41.35 3.68
3380 6663 8.604640 TGCCATATGTTGCCATATTATTTTTG 57.395 30.769 1.24 0.00 41.35 2.44
3383 6666 8.649591 TCTTTGCCATATGTTGCCATATTATTT 58.350 29.630 1.24 0.00 41.35 1.40
3384 6667 8.192743 TCTTTGCCATATGTTGCCATATTATT 57.807 30.769 1.24 0.00 41.35 1.40
3385 6668 7.779754 TCTTTGCCATATGTTGCCATATTAT 57.220 32.000 1.24 0.00 41.35 1.28
3386 6669 7.779754 ATCTTTGCCATATGTTGCCATATTA 57.220 32.000 1.24 0.00 41.35 0.98
3387 6670 6.675413 ATCTTTGCCATATGTTGCCATATT 57.325 33.333 1.24 0.00 41.35 1.28
3388 6671 6.950041 ACTATCTTTGCCATATGTTGCCATAT 59.050 34.615 1.24 0.00 43.54 1.78
3397 6690 5.349817 GGATCGTGACTATCTTTGCCATATG 59.650 44.000 0.00 0.00 0.00 1.78
3398 6691 5.012046 TGGATCGTGACTATCTTTGCCATAT 59.988 40.000 0.00 0.00 0.00 1.78
3400 6693 3.134623 TGGATCGTGACTATCTTTGCCAT 59.865 43.478 0.00 0.00 0.00 4.40
3409 6702 2.420129 GGGCTGTTTGGATCGTGACTAT 60.420 50.000 0.00 0.00 0.00 2.12
3417 6710 4.023291 TGGAAATTAGGGCTGTTTGGATC 58.977 43.478 0.00 0.00 0.00 3.36
3419 6712 3.534357 TGGAAATTAGGGCTGTTTGGA 57.466 42.857 0.00 0.00 0.00 3.53
3432 6725 8.428063 TGGTGTTGAAAATGTAAGATGGAAATT 58.572 29.630 0.00 0.00 0.00 1.82
3476 6771 8.430801 AGTGAAGAATATCAGCAATACAAGTC 57.569 34.615 0.00 0.00 0.00 3.01
3485 6780 6.108687 ACGAAATGAGTGAAGAATATCAGCA 58.891 36.000 0.00 0.00 0.00 4.41
3518 6813 5.128171 AGTTAGTCGTTTGGCATATGTAGGA 59.872 40.000 4.29 0.00 0.00 2.94
3597 6892 1.603802 ACAGAAACGGCACACAATCAG 59.396 47.619 0.00 0.00 0.00 2.90
3644 6939 0.103208 GATCTCGAACATCCAGCGGT 59.897 55.000 0.00 0.00 0.00 5.68
3814 7109 5.366768 ACCAACATATATGCAGTACAGAGGT 59.633 40.000 12.79 5.06 0.00 3.85
3852 7147 3.010027 TCCATGGACTAGCAAACAATGGA 59.990 43.478 11.44 10.11 33.77 3.41
3977 7273 1.001248 TCCCTCCGTCCCAGTAAGG 59.999 63.158 0.00 0.00 37.03 2.69
4033 7329 9.955208 CGGTAACATAACTAGTTATCACACATA 57.045 33.333 22.60 8.94 33.26 2.29
4034 7330 8.472413 ACGGTAACATAACTAGTTATCACACAT 58.528 33.333 22.60 10.78 33.26 3.21
4035 7331 7.829725 ACGGTAACATAACTAGTTATCACACA 58.170 34.615 22.60 6.52 33.26 3.72
4036 7332 9.956720 ATACGGTAACATAACTAGTTATCACAC 57.043 33.333 22.60 18.36 33.26 3.82
4037 7333 9.955208 CATACGGTAACATAACTAGTTATCACA 57.045 33.333 22.60 9.58 33.26 3.58
4038 7334 8.909671 GCATACGGTAACATAACTAGTTATCAC 58.090 37.037 22.60 18.92 33.26 3.06
4039 7335 8.084073 GGCATACGGTAACATAACTAGTTATCA 58.916 37.037 22.60 10.20 33.26 2.15
4040 7336 8.302438 AGGCATACGGTAACATAACTAGTTATC 58.698 37.037 22.60 12.80 33.79 1.75
4041 7337 8.186709 AGGCATACGGTAACATAACTAGTTAT 57.813 34.615 20.27 20.27 36.27 1.89
4042 7338 7.587037 AGGCATACGGTAACATAACTAGTTA 57.413 36.000 17.41 17.41 0.00 2.24
4043 7339 6.475596 AGGCATACGGTAACATAACTAGTT 57.524 37.500 13.68 13.68 0.00 2.24
4044 7340 7.587037 TTAGGCATACGGTAACATAACTAGT 57.413 36.000 0.00 0.00 0.00 2.57
4046 7342 9.912634 GTAATTAGGCATACGGTAACATAACTA 57.087 33.333 0.00 0.00 0.00 2.24
4047 7343 8.645110 AGTAATTAGGCATACGGTAACATAACT 58.355 33.333 0.00 0.00 0.00 2.24
4048 7344 8.822652 AGTAATTAGGCATACGGTAACATAAC 57.177 34.615 0.00 0.00 0.00 1.89
4049 7345 7.809331 CGAGTAATTAGGCATACGGTAACATAA 59.191 37.037 0.00 0.00 0.00 1.90
4050 7346 7.307694 CGAGTAATTAGGCATACGGTAACATA 58.692 38.462 0.00 0.00 0.00 2.29
4051 7347 6.154445 CGAGTAATTAGGCATACGGTAACAT 58.846 40.000 0.00 0.00 0.00 2.71
4052 7348 5.522456 CGAGTAATTAGGCATACGGTAACA 58.478 41.667 0.00 0.00 0.00 2.41
4053 7349 4.383948 GCGAGTAATTAGGCATACGGTAAC 59.616 45.833 0.00 0.00 0.00 2.50
4054 7350 4.549458 GCGAGTAATTAGGCATACGGTAA 58.451 43.478 0.00 0.00 0.00 2.85
4055 7351 3.057315 GGCGAGTAATTAGGCATACGGTA 60.057 47.826 0.00 0.00 0.00 4.02
4056 7352 2.288640 GGCGAGTAATTAGGCATACGGT 60.289 50.000 0.00 0.00 0.00 4.83
4057 7353 2.288579 TGGCGAGTAATTAGGCATACGG 60.289 50.000 0.00 0.00 35.49 4.02
4058 7354 2.729882 GTGGCGAGTAATTAGGCATACG 59.270 50.000 3.30 0.00 42.29 3.06
4059 7355 3.724374 TGTGGCGAGTAATTAGGCATAC 58.276 45.455 3.30 3.89 42.29 2.39
4060 7356 4.039852 TGATGTGGCGAGTAATTAGGCATA 59.960 41.667 3.30 1.72 42.29 3.14
4061 7357 3.181455 TGATGTGGCGAGTAATTAGGCAT 60.181 43.478 3.30 0.00 42.29 4.40
4062 7358 2.169561 TGATGTGGCGAGTAATTAGGCA 59.830 45.455 0.00 1.43 38.13 4.75
4063 7359 2.833794 TGATGTGGCGAGTAATTAGGC 58.166 47.619 0.00 0.00 0.00 3.93
4064 7360 4.687948 CAGATGATGTGGCGAGTAATTAGG 59.312 45.833 0.00 0.00 0.00 2.69
4065 7361 5.292765 ACAGATGATGTGGCGAGTAATTAG 58.707 41.667 0.00 0.00 41.91 1.73
4066 7362 5.276461 ACAGATGATGTGGCGAGTAATTA 57.724 39.130 0.00 0.00 41.91 1.40
4067 7363 4.142609 ACAGATGATGTGGCGAGTAATT 57.857 40.909 0.00 0.00 41.91 1.40
4068 7364 3.827008 ACAGATGATGTGGCGAGTAAT 57.173 42.857 0.00 0.00 41.91 1.89
4069 7365 3.610040 AACAGATGATGTGGCGAGTAA 57.390 42.857 0.00 0.00 43.00 2.24
4070 7366 3.610040 AAACAGATGATGTGGCGAGTA 57.390 42.857 0.00 0.00 43.00 2.59
4071 7367 2.479566 AAACAGATGATGTGGCGAGT 57.520 45.000 0.00 0.00 43.00 4.18
4072 7368 2.485426 ACAAAACAGATGATGTGGCGAG 59.515 45.455 0.00 0.00 43.00 5.03
4073 7369 2.483877 GACAAAACAGATGATGTGGCGA 59.516 45.455 0.00 0.00 43.00 5.54
4074 7370 2.485426 AGACAAAACAGATGATGTGGCG 59.515 45.455 0.00 0.00 43.00 5.69
4075 7371 5.627499 TTAGACAAAACAGATGATGTGGC 57.373 39.130 0.00 0.00 43.00 5.01
4076 7372 6.072286 AGCTTTAGACAAAACAGATGATGTGG 60.072 38.462 0.00 0.00 43.00 4.17
4077 7373 6.800408 CAGCTTTAGACAAAACAGATGATGTG 59.200 38.462 0.00 0.00 43.00 3.21
4078 7374 6.488006 ACAGCTTTAGACAAAACAGATGATGT 59.512 34.615 0.00 0.00 46.97 3.06
4079 7375 6.800408 CACAGCTTTAGACAAAACAGATGATG 59.200 38.462 0.00 0.00 0.00 3.07
4080 7376 6.488006 ACACAGCTTTAGACAAAACAGATGAT 59.512 34.615 0.00 0.00 0.00 2.45
4081 7377 5.822519 ACACAGCTTTAGACAAAACAGATGA 59.177 36.000 0.00 0.00 0.00 2.92
4082 7378 5.911280 CACACAGCTTTAGACAAAACAGATG 59.089 40.000 0.00 0.00 0.00 2.90
4083 7379 5.822519 TCACACAGCTTTAGACAAAACAGAT 59.177 36.000 0.00 0.00 0.00 2.90
4084 7380 5.182487 TCACACAGCTTTAGACAAAACAGA 58.818 37.500 0.00 0.00 0.00 3.41
4085 7381 5.484173 TCACACAGCTTTAGACAAAACAG 57.516 39.130 0.00 0.00 0.00 3.16
4086 7382 5.356751 ACATCACACAGCTTTAGACAAAACA 59.643 36.000 0.00 0.00 0.00 2.83
4087 7383 5.821204 ACATCACACAGCTTTAGACAAAAC 58.179 37.500 0.00 0.00 0.00 2.43
4088 7384 6.449635 AACATCACACAGCTTTAGACAAAA 57.550 33.333 0.00 0.00 0.00 2.44
4089 7385 6.017440 GGTAACATCACACAGCTTTAGACAAA 60.017 38.462 0.00 0.00 0.00 2.83
4090 7386 5.468746 GGTAACATCACACAGCTTTAGACAA 59.531 40.000 0.00 0.00 0.00 3.18
4091 7387 4.994852 GGTAACATCACACAGCTTTAGACA 59.005 41.667 0.00 0.00 0.00 3.41
4092 7388 4.994852 TGGTAACATCACACAGCTTTAGAC 59.005 41.667 0.00 0.00 46.17 2.59
4093 7389 5.222079 TGGTAACATCACACAGCTTTAGA 57.778 39.130 0.00 0.00 46.17 2.10
4111 7407 9.078990 CCTACAGTGAGAATAACATAGATGGTA 57.921 37.037 0.00 0.00 33.94 3.25
4112 7408 7.565398 ACCTACAGTGAGAATAACATAGATGGT 59.435 37.037 0.00 0.00 0.00 3.55
4113 7409 7.957002 ACCTACAGTGAGAATAACATAGATGG 58.043 38.462 0.00 0.00 0.00 3.51
4123 7419 9.916360 TCACTTAGATTACCTACAGTGAGAATA 57.084 33.333 0.00 0.00 38.74 1.75
4124 7420 8.824756 TCACTTAGATTACCTACAGTGAGAAT 57.175 34.615 0.00 0.00 38.74 2.40
4125 7421 8.824756 ATCACTTAGATTACCTACAGTGAGAA 57.175 34.615 0.00 0.00 42.14 2.87
4126 7422 9.916360 TTATCACTTAGATTACCTACAGTGAGA 57.084 33.333 0.00 0.00 42.14 3.27
4127 7423 9.953697 GTTATCACTTAGATTACCTACAGTGAG 57.046 37.037 0.00 0.00 42.14 3.51
4128 7424 9.470399 TGTTATCACTTAGATTACCTACAGTGA 57.530 33.333 0.00 2.49 42.52 3.41
4185 7481 9.118300 CTTGCCTCTCTTTCATCATTAATTACT 57.882 33.333 0.00 0.00 0.00 2.24
4186 7482 8.897752 ACTTGCCTCTCTTTCATCATTAATTAC 58.102 33.333 0.00 0.00 0.00 1.89
4188 7484 7.951347 ACTTGCCTCTCTTTCATCATTAATT 57.049 32.000 0.00 0.00 0.00 1.40
4189 7485 9.638176 ATTACTTGCCTCTCTTTCATCATTAAT 57.362 29.630 0.00 0.00 0.00 1.40
4192 7488 8.897752 GTTATTACTTGCCTCTCTTTCATCATT 58.102 33.333 0.00 0.00 0.00 2.57
4193 7489 8.049117 TGTTATTACTTGCCTCTCTTTCATCAT 58.951 33.333 0.00 0.00 0.00 2.45
4194 7490 7.394016 TGTTATTACTTGCCTCTCTTTCATCA 58.606 34.615 0.00 0.00 0.00 3.07
4195 7491 7.849804 TGTTATTACTTGCCTCTCTTTCATC 57.150 36.000 0.00 0.00 0.00 2.92
4196 7492 9.553064 CTATGTTATTACTTGCCTCTCTTTCAT 57.447 33.333 0.00 0.00 0.00 2.57
4197 7493 7.495934 GCTATGTTATTACTTGCCTCTCTTTCA 59.504 37.037 0.00 0.00 0.00 2.69
4198 7494 7.713073 AGCTATGTTATTACTTGCCTCTCTTTC 59.287 37.037 0.00 0.00 0.00 2.62
4199 7495 7.569240 AGCTATGTTATTACTTGCCTCTCTTT 58.431 34.615 0.00 0.00 0.00 2.52
4200 7496 7.130681 AGCTATGTTATTACTTGCCTCTCTT 57.869 36.000 0.00 0.00 0.00 2.85
4201 7497 6.739331 AGCTATGTTATTACTTGCCTCTCT 57.261 37.500 0.00 0.00 0.00 3.10
4202 7498 7.662897 ACTAGCTATGTTATTACTTGCCTCTC 58.337 38.462 0.00 0.00 0.00 3.20
4203 7499 7.604657 ACTAGCTATGTTATTACTTGCCTCT 57.395 36.000 0.00 0.00 0.00 3.69
4204 7500 9.194271 GTAACTAGCTATGTTATTACTTGCCTC 57.806 37.037 14.69 1.21 33.29 4.70
4205 7501 8.925338 AGTAACTAGCTATGTTATTACTTGCCT 58.075 33.333 14.69 6.18 30.59 4.75
4216 7512 9.080097 CCCATAGAACTAGTAACTAGCTATGTT 57.920 37.037 6.25 11.59 36.51 2.71
4217 7513 8.226112 ACCCATAGAACTAGTAACTAGCTATGT 58.774 37.037 6.25 0.00 36.51 2.29
4218 7514 8.638629 ACCCATAGAACTAGTAACTAGCTATG 57.361 38.462 0.00 3.17 37.57 2.23
4228 7524 9.871175 TGTGTGATATTACCCATAGAACTAGTA 57.129 33.333 0.00 0.00 0.00 1.82
4229 7525 8.777578 TGTGTGATATTACCCATAGAACTAGT 57.222 34.615 0.00 0.00 0.00 2.57
4232 7528 9.381038 AGTATGTGTGATATTACCCATAGAACT 57.619 33.333 3.55 0.00 0.00 3.01
4233 7529 9.424319 CAGTATGTGTGATATTACCCATAGAAC 57.576 37.037 3.55 0.00 0.00 3.01
4234 7530 9.374711 TCAGTATGTGTGATATTACCCATAGAA 57.625 33.333 3.55 0.00 37.40 2.10
4235 7531 8.950007 TCAGTATGTGTGATATTACCCATAGA 57.050 34.615 3.55 0.00 37.40 1.98
4236 7532 9.591792 CATCAGTATGTGTGATATTACCCATAG 57.408 37.037 3.55 0.00 37.40 2.23
4237 7533 8.040727 GCATCAGTATGTGTGATATTACCCATA 58.959 37.037 0.00 0.00 37.40 2.74
4238 7534 6.881065 GCATCAGTATGTGTGATATTACCCAT 59.119 38.462 1.48 1.48 37.40 4.00
4239 7535 6.230472 GCATCAGTATGTGTGATATTACCCA 58.770 40.000 0.00 0.00 37.40 4.51
4240 7536 5.348724 CGCATCAGTATGTGTGATATTACCC 59.651 44.000 0.00 0.00 38.55 3.69
4241 7537 5.348724 CCGCATCAGTATGTGTGATATTACC 59.651 44.000 0.00 0.00 41.21 2.85
4242 7538 6.156519 TCCGCATCAGTATGTGTGATATTAC 58.843 40.000 0.00 0.00 41.21 1.89
4243 7539 6.339587 TCCGCATCAGTATGTGTGATATTA 57.660 37.500 0.00 0.00 41.21 0.98
4244 7540 5.213891 TCCGCATCAGTATGTGTGATATT 57.786 39.130 0.00 0.00 41.21 1.28
4245 7541 4.814147 CTCCGCATCAGTATGTGTGATAT 58.186 43.478 0.00 0.00 41.21 1.63
4246 7542 3.552890 GCTCCGCATCAGTATGTGTGATA 60.553 47.826 0.00 0.00 41.21 2.15
4247 7543 2.804572 GCTCCGCATCAGTATGTGTGAT 60.805 50.000 0.00 0.00 41.21 3.06
4248 7544 1.471501 GCTCCGCATCAGTATGTGTGA 60.472 52.381 0.00 0.00 41.21 3.58
4249 7545 0.933097 GCTCCGCATCAGTATGTGTG 59.067 55.000 0.00 0.00 41.21 3.82
4250 7546 0.536724 TGCTCCGCATCAGTATGTGT 59.463 50.000 0.00 0.00 41.21 3.72
4251 7547 3.367678 TGCTCCGCATCAGTATGTG 57.632 52.632 0.00 0.00 42.23 3.21
4303 7600 1.067071 GGGTCCAAGAGGTGTCGTAAG 60.067 57.143 0.00 0.00 35.89 2.34
4304 7601 0.971386 GGGTCCAAGAGGTGTCGTAA 59.029 55.000 0.00 0.00 35.89 3.18
4331 7628 1.217882 CTCGGTTTCAAGACGTGCTT 58.782 50.000 0.00 0.00 37.29 3.91
4380 7686 4.532126 AGTAACCATGTCTCAAGTGGATCA 59.468 41.667 0.00 0.00 36.82 2.92
4414 7720 6.714810 TGGTATCTAAGCACACAAAACATCTT 59.285 34.615 0.00 0.00 0.00 2.40
4434 7740 1.294068 TCTAGGCTGGTCCCTTGGTAT 59.706 52.381 0.00 0.00 36.41 2.73
4443 7749 1.684450 GTAGCTCCTTCTAGGCTGGTC 59.316 57.143 0.00 0.00 37.50 4.02
4478 7784 2.158784 GGCTCCTCTTCATGCTCTTGAT 60.159 50.000 0.00 0.00 0.00 2.57
4487 7793 1.078848 GTGTGCGGCTCCTCTTCAT 60.079 57.895 0.00 0.00 0.00 2.57
4526 7851 1.600636 CGCTTGGAGGGTTTCAGCA 60.601 57.895 0.00 0.00 0.00 4.41
4533 7877 0.974525 GGTAGTACCGCTTGGAGGGT 60.975 60.000 2.90 0.00 40.35 4.34
4680 8042 1.457079 GCCCTAGGCCCGTTCTCTA 60.457 63.158 2.05 0.00 44.06 2.43
4711 8073 6.423905 TGAATCCACGAAAGAGTAAGTGAAAG 59.576 38.462 0.00 0.00 36.79 2.62
4722 8084 9.745880 GTTTATATAGTCTGAATCCACGAAAGA 57.254 33.333 0.00 0.00 0.00 2.52
4746 8108 2.319438 ACTAGAAGGATGAGGGGGAGTT 59.681 50.000 0.00 0.00 0.00 3.01
4762 8124 3.517612 ACCTTTGCTGACCCTAACTAGA 58.482 45.455 0.00 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.