Multiple sequence alignment - TraesCS3A01G198100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G198100 | chr3A | 100.000 | 1930 | 0 | 0 | 425 | 2354 | 312751975 | 312750046 | 0.000000e+00 | 3565.0 |
1 | TraesCS3A01G198100 | chr3A | 95.591 | 1361 | 57 | 3 | 693 | 2052 | 312760304 | 312758946 | 0.000000e+00 | 2178.0 |
2 | TraesCS3A01G198100 | chr3A | 94.444 | 180 | 9 | 1 | 558 | 737 | 312760500 | 312760322 | 2.300000e-70 | 276.0 |
3 | TraesCS3A01G198100 | chr3A | 100.000 | 74 | 0 | 0 | 1433 | 1506 | 310770225 | 310770298 | 1.130000e-28 | 137.0 |
4 | TraesCS3A01G198100 | chr3A | 97.222 | 72 | 2 | 0 | 1435 | 1506 | 310762288 | 310762359 | 3.180000e-24 | 122.0 |
5 | TraesCS3A01G198100 | chr3A | 100.000 | 41 | 0 | 0 | 1 | 41 | 312752399 | 312752359 | 2.510000e-10 | 76.8 |
6 | TraesCS3A01G198100 | chr7A | 93.726 | 1546 | 87 | 8 | 510 | 2052 | 463066082 | 463067620 | 0.000000e+00 | 2309.0 |
7 | TraesCS3A01G198100 | chr7A | 99.007 | 302 | 3 | 0 | 2053 | 2354 | 156616563 | 156616864 | 2.060000e-150 | 542.0 |
8 | TraesCS3A01G198100 | chr7A | 82.246 | 276 | 39 | 6 | 731 | 996 | 622189534 | 622189809 | 1.820000e-56 | 230.0 |
9 | TraesCS3A01G198100 | chr7A | 95.122 | 41 | 2 | 0 | 1 | 41 | 463065634 | 463065674 | 5.430000e-07 | 65.8 |
10 | TraesCS3A01G198100 | chr6B | 90.193 | 571 | 43 | 12 | 1487 | 2052 | 544564523 | 544563961 | 0.000000e+00 | 732.0 |
11 | TraesCS3A01G198100 | chr6B | 90.175 | 570 | 45 | 10 | 1487 | 2052 | 544575717 | 544575155 | 0.000000e+00 | 732.0 |
12 | TraesCS3A01G198100 | chr7B | 88.287 | 572 | 52 | 14 | 1487 | 2052 | 208347589 | 208347027 | 0.000000e+00 | 671.0 |
13 | TraesCS3A01G198100 | chr7B | 88.771 | 472 | 41 | 10 | 1516 | 1984 | 275439058 | 275438596 | 3.400000e-158 | 568.0 |
14 | TraesCS3A01G198100 | chr2D | 86.628 | 516 | 57 | 11 | 1543 | 2052 | 242523962 | 242524471 | 5.680000e-156 | 560.0 |
15 | TraesCS3A01G198100 | chr2D | 84.665 | 463 | 45 | 6 | 731 | 1184 | 296645179 | 296644734 | 2.780000e-119 | 438.0 |
16 | TraesCS3A01G198100 | chr2D | 83.077 | 390 | 41 | 9 | 731 | 1111 | 296659113 | 296658740 | 4.850000e-87 | 331.0 |
17 | TraesCS3A01G198100 | chr2D | 83.273 | 275 | 37 | 2 | 731 | 996 | 815014 | 815288 | 6.500000e-61 | 244.0 |
18 | TraesCS3A01G198100 | chr5D | 84.114 | 598 | 71 | 19 | 1462 | 2052 | 564054113 | 564054693 | 7.350000e-155 | 556.0 |
19 | TraesCS3A01G198100 | chr5D | 82.609 | 276 | 38 | 6 | 731 | 996 | 63048256 | 63048531 | 3.910000e-58 | 235.0 |
20 | TraesCS3A01G198100 | chr6A | 98.675 | 302 | 4 | 0 | 2053 | 2354 | 198382198 | 198382499 | 9.570000e-149 | 536.0 |
21 | TraesCS3A01G198100 | chr6A | 98.675 | 302 | 4 | 0 | 2053 | 2354 | 201039935 | 201039634 | 9.570000e-149 | 536.0 |
22 | TraesCS3A01G198100 | chr6A | 98.675 | 302 | 4 | 0 | 2053 | 2354 | 336523475 | 336523776 | 9.570000e-149 | 536.0 |
23 | TraesCS3A01G198100 | chr6A | 83.631 | 336 | 43 | 12 | 1131 | 1460 | 374990085 | 374990414 | 2.940000e-79 | 305.0 |
24 | TraesCS3A01G198100 | chr6A | 85.656 | 244 | 24 | 7 | 1237 | 1472 | 375004789 | 375005029 | 1.810000e-61 | 246.0 |
25 | TraesCS3A01G198100 | chr6A | 89.000 | 200 | 20 | 1 | 1159 | 1356 | 375055864 | 375056063 | 1.810000e-61 | 246.0 |
26 | TraesCS3A01G198100 | chr6A | 85.656 | 244 | 24 | 7 | 1237 | 1472 | 375056125 | 375056365 | 1.810000e-61 | 246.0 |
27 | TraesCS3A01G198100 | chr5A | 98.675 | 302 | 4 | 0 | 2053 | 2354 | 270432841 | 270432540 | 9.570000e-149 | 536.0 |
28 | TraesCS3A01G198100 | chr5A | 98.675 | 302 | 4 | 0 | 2053 | 2354 | 321360563 | 321360864 | 9.570000e-149 | 536.0 |
29 | TraesCS3A01G198100 | chr5A | 98.675 | 302 | 4 | 0 | 2053 | 2354 | 573687928 | 573688229 | 9.570000e-149 | 536.0 |
30 | TraesCS3A01G198100 | chr5A | 98.675 | 302 | 4 | 0 | 2053 | 2354 | 581599924 | 581599623 | 9.570000e-149 | 536.0 |
31 | TraesCS3A01G198100 | chr5A | 98.675 | 302 | 4 | 0 | 2053 | 2354 | 615101970 | 615101669 | 9.570000e-149 | 536.0 |
32 | TraesCS3A01G198100 | chr5A | 84.277 | 159 | 24 | 1 | 1016 | 1173 | 171628090 | 171627932 | 1.130000e-33 | 154.0 |
33 | TraesCS3A01G198100 | chr5B | 83.826 | 575 | 73 | 15 | 1483 | 2052 | 622253561 | 622254120 | 1.600000e-146 | 529.0 |
34 | TraesCS3A01G198100 | chr4B | 87.469 | 399 | 34 | 10 | 791 | 1173 | 364933740 | 364933342 | 1.660000e-121 | 446.0 |
35 | TraesCS3A01G198100 | chr4B | 86.392 | 316 | 39 | 4 | 1159 | 1472 | 315629746 | 315630059 | 2.240000e-90 | 342.0 |
36 | TraesCS3A01G198100 | chr3B | 82.056 | 496 | 59 | 9 | 699 | 1184 | 417973758 | 417974233 | 1.700000e-106 | 396.0 |
37 | TraesCS3A01G198100 | chr3B | 82.056 | 496 | 59 | 9 | 699 | 1184 | 417981222 | 417981697 | 1.700000e-106 | 396.0 |
38 | TraesCS3A01G198100 | chr4A | 82.505 | 463 | 55 | 13 | 731 | 1184 | 632330001 | 632330446 | 1.320000e-102 | 383.0 |
39 | TraesCS3A01G198100 | chr7D | 83.333 | 276 | 36 | 6 | 731 | 996 | 433994627 | 433994352 | 1.810000e-61 | 246.0 |
40 | TraesCS3A01G198100 | chr3D | 82.246 | 276 | 39 | 6 | 731 | 996 | 41541575 | 41541850 | 1.820000e-56 | 230.0 |
41 | TraesCS3A01G198100 | chr1A | 89.143 | 175 | 18 | 1 | 1162 | 1335 | 81213996 | 81213822 | 1.420000e-52 | 217.0 |
42 | TraesCS3A01G198100 | chr1A | 100.000 | 74 | 0 | 0 | 1433 | 1506 | 130482707 | 130482780 | 1.130000e-28 | 137.0 |
43 | TraesCS3A01G198100 | chr1A | 98.649 | 74 | 1 | 0 | 1433 | 1506 | 130474757 | 130474830 | 5.280000e-27 | 132.0 |
44 | TraesCS3A01G198100 | chr1D | 88.889 | 135 | 12 | 3 | 476 | 610 | 294146532 | 294146401 | 1.870000e-36 | 163.0 |
45 | TraesCS3A01G198100 | chr6D | 88.136 | 118 | 13 | 1 | 482 | 599 | 295628107 | 295627991 | 3.150000e-29 | 139.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G198100 | chr3A | 312750046 | 312752399 | 2353 | True | 1820.9 | 3565 | 100.0000 | 1 | 2354 | 2 | chr3A.!!$R1 | 2353 |
1 | TraesCS3A01G198100 | chr3A | 312758946 | 312760500 | 1554 | True | 1227.0 | 2178 | 95.0175 | 558 | 2052 | 2 | chr3A.!!$R2 | 1494 |
2 | TraesCS3A01G198100 | chr7A | 463065634 | 463067620 | 1986 | False | 1187.4 | 2309 | 94.4240 | 1 | 2052 | 2 | chr7A.!!$F3 | 2051 |
3 | TraesCS3A01G198100 | chr6B | 544563961 | 544564523 | 562 | True | 732.0 | 732 | 90.1930 | 1487 | 2052 | 1 | chr6B.!!$R1 | 565 |
4 | TraesCS3A01G198100 | chr6B | 544575155 | 544575717 | 562 | True | 732.0 | 732 | 90.1750 | 1487 | 2052 | 1 | chr6B.!!$R2 | 565 |
5 | TraesCS3A01G198100 | chr7B | 208347027 | 208347589 | 562 | True | 671.0 | 671 | 88.2870 | 1487 | 2052 | 1 | chr7B.!!$R1 | 565 |
6 | TraesCS3A01G198100 | chr2D | 242523962 | 242524471 | 509 | False | 560.0 | 560 | 86.6280 | 1543 | 2052 | 1 | chr2D.!!$F2 | 509 |
7 | TraesCS3A01G198100 | chr5D | 564054113 | 564054693 | 580 | False | 556.0 | 556 | 84.1140 | 1462 | 2052 | 1 | chr5D.!!$F2 | 590 |
8 | TraesCS3A01G198100 | chr6A | 375055864 | 375056365 | 501 | False | 246.0 | 246 | 87.3280 | 1159 | 1472 | 2 | chr6A.!!$F5 | 313 |
9 | TraesCS3A01G198100 | chr5B | 622253561 | 622254120 | 559 | False | 529.0 | 529 | 83.8260 | 1483 | 2052 | 1 | chr5B.!!$F1 | 569 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
636 | 952 | 0.473326 | GAGTAGTAGAGGCGAGGGGA | 59.527 | 60.0 | 0.0 | 0.0 | 0.0 | 4.81 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2323 | 2904 | 0.321298 | TCAGCCCCTTACGAAGCAAC | 60.321 | 55.0 | 0.0 | 0.0 | 0.0 | 4.17 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
500 | 501 | 4.421554 | AGGCAGGCAGGGGAGCTA | 62.422 | 66.667 | 0.00 | 0.00 | 34.17 | 3.32 |
501 | 502 | 4.182433 | GGCAGGCAGGGGAGCTAC | 62.182 | 72.222 | 0.00 | 0.00 | 34.17 | 3.58 |
502 | 503 | 4.182433 | GCAGGCAGGGGAGCTACC | 62.182 | 72.222 | 6.36 | 6.36 | 38.08 | 3.18 |
503 | 504 | 3.854669 | CAGGCAGGGGAGCTACCG | 61.855 | 72.222 | 9.48 | 0.00 | 40.11 | 4.02 |
631 | 946 | 0.529337 | CCGACGAGTAGTAGAGGCGA | 60.529 | 60.000 | 0.00 | 0.00 | 0.00 | 5.54 |
636 | 952 | 0.473326 | GAGTAGTAGAGGCGAGGGGA | 59.527 | 60.000 | 0.00 | 0.00 | 0.00 | 4.81 |
745 | 1123 | 2.973899 | CGGCAGCAGGTGAGTAGT | 59.026 | 61.111 | 3.02 | 0.00 | 0.00 | 2.73 |
799 | 1177 | 3.490793 | CTCGAGCGGGCGTGATGAT | 62.491 | 63.158 | 0.00 | 0.00 | 0.00 | 2.45 |
926 | 1304 | 1.067416 | GTGGATGGTCGAGCGCATA | 59.933 | 57.895 | 11.47 | 0.00 | 0.00 | 3.14 |
1060 | 1438 | 1.134189 | GGGAGGAATCGAACGGGAAAT | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
1086 | 1464 | 1.610522 | GCTTTTGATGTGGTGCTCACT | 59.389 | 47.619 | 11.00 | 0.00 | 46.20 | 3.41 |
1144 | 1522 | 2.031919 | AACGGCAGCGGATTGACA | 59.968 | 55.556 | 7.02 | 0.00 | 0.00 | 3.58 |
1145 | 1523 | 1.573829 | GAACGGCAGCGGATTGACAA | 61.574 | 55.000 | 7.02 | 0.00 | 0.00 | 3.18 |
1204 | 1584 | 4.115199 | GGGCATGGAGGCGTCCTT | 62.115 | 66.667 | 24.96 | 16.74 | 44.30 | 3.36 |
1226 | 1606 | 2.122768 | CTTGACCTGGGCCTTAGAGAT | 58.877 | 52.381 | 4.53 | 0.00 | 0.00 | 2.75 |
1516 | 2085 | 1.186200 | CTGCCTCCTGTACTGTAGCA | 58.814 | 55.000 | 0.00 | 1.78 | 0.00 | 3.49 |
1525 | 2094 | 3.511934 | CCTGTACTGTAGCAAGAGGAAGT | 59.488 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
1550 | 2119 | 3.570212 | GTGGGAGTGTGGGCTGGT | 61.570 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
1799 | 2375 | 3.561143 | AGCCAATTAATATGCCGTTGGA | 58.439 | 40.909 | 6.62 | 0.00 | 41.36 | 3.53 |
2046 | 2627 | 7.729124 | TTACTATAGCTTAATTATCCGGGCT | 57.271 | 36.000 | 0.00 | 1.57 | 0.00 | 5.19 |
2052 | 2633 | 3.821033 | GCTTAATTATCCGGGCTTCACAT | 59.179 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
2053 | 2634 | 5.001232 | GCTTAATTATCCGGGCTTCACATA | 58.999 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
2054 | 2635 | 5.472137 | GCTTAATTATCCGGGCTTCACATAA | 59.528 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
2055 | 2636 | 6.151144 | GCTTAATTATCCGGGCTTCACATAAT | 59.849 | 38.462 | 0.00 | 0.00 | 0.00 | 1.28 |
2056 | 2637 | 7.335924 | GCTTAATTATCCGGGCTTCACATAATA | 59.664 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
2057 | 2638 | 8.556213 | TTAATTATCCGGGCTTCACATAATAC | 57.444 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
2058 | 2639 | 2.922740 | TCCGGGCTTCACATAATACC | 57.077 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2059 | 2640 | 1.418637 | TCCGGGCTTCACATAATACCC | 59.581 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
2060 | 2641 | 1.544759 | CCGGGCTTCACATAATACCCC | 60.545 | 57.143 | 0.00 | 0.00 | 33.54 | 4.95 |
2061 | 2642 | 1.420138 | CGGGCTTCACATAATACCCCT | 59.580 | 52.381 | 0.00 | 0.00 | 33.54 | 4.79 |
2062 | 2643 | 2.158667 | CGGGCTTCACATAATACCCCTT | 60.159 | 50.000 | 0.00 | 0.00 | 33.54 | 3.95 |
2063 | 2644 | 3.687264 | CGGGCTTCACATAATACCCCTTT | 60.687 | 47.826 | 0.00 | 0.00 | 33.54 | 3.11 |
2064 | 2645 | 3.636764 | GGGCTTCACATAATACCCCTTTG | 59.363 | 47.826 | 0.00 | 0.00 | 0.00 | 2.77 |
2065 | 2646 | 4.532834 | GGCTTCACATAATACCCCTTTGA | 58.467 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
2066 | 2647 | 5.140454 | GGCTTCACATAATACCCCTTTGAT | 58.860 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
2067 | 2648 | 5.598417 | GGCTTCACATAATACCCCTTTGATT | 59.402 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2068 | 2649 | 6.775629 | GGCTTCACATAATACCCCTTTGATTA | 59.224 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
2069 | 2650 | 7.451566 | GGCTTCACATAATACCCCTTTGATTAT | 59.548 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
2070 | 2651 | 8.299570 | GCTTCACATAATACCCCTTTGATTATG | 58.700 | 37.037 | 10.73 | 10.73 | 44.05 | 1.90 |
2071 | 2652 | 9.573166 | CTTCACATAATACCCCTTTGATTATGA | 57.427 | 33.333 | 16.69 | 0.00 | 42.38 | 2.15 |
2072 | 2653 | 9.928618 | TTCACATAATACCCCTTTGATTATGAA | 57.071 | 29.630 | 16.69 | 4.23 | 42.38 | 2.57 |
2073 | 2654 | 9.349713 | TCACATAATACCCCTTTGATTATGAAC | 57.650 | 33.333 | 16.69 | 0.00 | 42.38 | 3.18 |
2074 | 2655 | 9.130661 | CACATAATACCCCTTTGATTATGAACA | 57.869 | 33.333 | 16.69 | 0.00 | 42.38 | 3.18 |
2075 | 2656 | 9.881773 | ACATAATACCCCTTTGATTATGAACAT | 57.118 | 29.630 | 16.69 | 0.00 | 42.38 | 2.71 |
2077 | 2658 | 9.881773 | ATAATACCCCTTTGATTATGAACATGT | 57.118 | 29.630 | 0.00 | 0.00 | 0.00 | 3.21 |
2078 | 2659 | 8.608185 | AATACCCCTTTGATTATGAACATGTT | 57.392 | 30.769 | 11.78 | 11.78 | 0.00 | 2.71 |
2079 | 2660 | 6.933514 | ACCCCTTTGATTATGAACATGTTT | 57.066 | 33.333 | 13.36 | 0.00 | 0.00 | 2.83 |
2080 | 2661 | 9.707957 | ATACCCCTTTGATTATGAACATGTTTA | 57.292 | 29.630 | 13.36 | 9.29 | 0.00 | 2.01 |
2081 | 2662 | 8.608185 | ACCCCTTTGATTATGAACATGTTTAT | 57.392 | 30.769 | 18.59 | 18.59 | 0.00 | 1.40 |
2082 | 2663 | 8.477256 | ACCCCTTTGATTATGAACATGTTTATG | 58.523 | 33.333 | 22.35 | 6.81 | 40.24 | 1.90 |
2083 | 2664 | 7.439056 | CCCCTTTGATTATGAACATGTTTATGC | 59.561 | 37.037 | 22.35 | 13.37 | 37.85 | 3.14 |
2084 | 2665 | 8.199449 | CCCTTTGATTATGAACATGTTTATGCT | 58.801 | 33.333 | 22.35 | 11.37 | 37.85 | 3.79 |
2085 | 2666 | 9.590451 | CCTTTGATTATGAACATGTTTATGCTT | 57.410 | 29.630 | 22.35 | 9.39 | 37.85 | 3.91 |
2088 | 2669 | 9.926158 | TTGATTATGAACATGTTTATGCTTTGT | 57.074 | 25.926 | 22.35 | 1.52 | 37.85 | 2.83 |
2089 | 2670 | 9.356433 | TGATTATGAACATGTTTATGCTTTGTG | 57.644 | 29.630 | 22.35 | 0.00 | 37.85 | 3.33 |
2090 | 2671 | 9.571810 | GATTATGAACATGTTTATGCTTTGTGA | 57.428 | 29.630 | 22.35 | 0.88 | 37.85 | 3.58 |
2091 | 2672 | 8.969121 | TTATGAACATGTTTATGCTTTGTGAG | 57.031 | 30.769 | 22.35 | 0.00 | 37.85 | 3.51 |
2092 | 2673 | 6.389830 | TGAACATGTTTATGCTTTGTGAGT | 57.610 | 33.333 | 13.36 | 0.00 | 37.85 | 3.41 |
2093 | 2674 | 7.503521 | TGAACATGTTTATGCTTTGTGAGTA | 57.496 | 32.000 | 13.36 | 0.00 | 37.85 | 2.59 |
2094 | 2675 | 7.584108 | TGAACATGTTTATGCTTTGTGAGTAG | 58.416 | 34.615 | 13.36 | 0.00 | 37.85 | 2.57 |
2095 | 2676 | 7.228507 | TGAACATGTTTATGCTTTGTGAGTAGT | 59.771 | 33.333 | 13.36 | 0.00 | 37.85 | 2.73 |
2096 | 2677 | 7.510549 | ACATGTTTATGCTTTGTGAGTAGTT | 57.489 | 32.000 | 0.00 | 0.00 | 37.85 | 2.24 |
2097 | 2678 | 8.615878 | ACATGTTTATGCTTTGTGAGTAGTTA | 57.384 | 30.769 | 0.00 | 0.00 | 37.85 | 2.24 |
2098 | 2679 | 8.504005 | ACATGTTTATGCTTTGTGAGTAGTTAC | 58.496 | 33.333 | 0.00 | 0.00 | 37.85 | 2.50 |
2099 | 2680 | 8.721478 | CATGTTTATGCTTTGTGAGTAGTTACT | 58.279 | 33.333 | 0.00 | 0.00 | 39.71 | 2.24 |
2100 | 2681 | 8.671384 | TGTTTATGCTTTGTGAGTAGTTACTT | 57.329 | 30.769 | 0.00 | 0.00 | 36.50 | 2.24 |
2101 | 2682 | 9.116067 | TGTTTATGCTTTGTGAGTAGTTACTTT | 57.884 | 29.630 | 0.00 | 0.00 | 36.50 | 2.66 |
2102 | 2683 | 9.946165 | GTTTATGCTTTGTGAGTAGTTACTTTT | 57.054 | 29.630 | 0.00 | 0.00 | 36.50 | 2.27 |
2103 | 2684 | 9.944663 | TTTATGCTTTGTGAGTAGTTACTTTTG | 57.055 | 29.630 | 0.00 | 0.00 | 36.50 | 2.44 |
2104 | 2685 | 6.995511 | TGCTTTGTGAGTAGTTACTTTTGT | 57.004 | 33.333 | 0.00 | 0.00 | 36.50 | 2.83 |
2105 | 2686 | 7.385778 | TGCTTTGTGAGTAGTTACTTTTGTT | 57.614 | 32.000 | 0.00 | 0.00 | 36.50 | 2.83 |
2106 | 2687 | 7.469260 | TGCTTTGTGAGTAGTTACTTTTGTTC | 58.531 | 34.615 | 0.00 | 0.00 | 36.50 | 3.18 |
2107 | 2688 | 7.335924 | TGCTTTGTGAGTAGTTACTTTTGTTCT | 59.664 | 33.333 | 0.00 | 0.00 | 36.50 | 3.01 |
2108 | 2689 | 8.182227 | GCTTTGTGAGTAGTTACTTTTGTTCTT | 58.818 | 33.333 | 0.00 | 0.00 | 36.50 | 2.52 |
2109 | 2690 | 9.490663 | CTTTGTGAGTAGTTACTTTTGTTCTTG | 57.509 | 33.333 | 0.00 | 0.00 | 36.50 | 3.02 |
2110 | 2691 | 8.780846 | TTGTGAGTAGTTACTTTTGTTCTTGA | 57.219 | 30.769 | 0.00 | 0.00 | 36.50 | 3.02 |
2111 | 2692 | 8.420374 | TGTGAGTAGTTACTTTTGTTCTTGAG | 57.580 | 34.615 | 0.00 | 0.00 | 36.50 | 3.02 |
2112 | 2693 | 7.494625 | TGTGAGTAGTTACTTTTGTTCTTGAGG | 59.505 | 37.037 | 0.00 | 0.00 | 36.50 | 3.86 |
2113 | 2694 | 7.709613 | GTGAGTAGTTACTTTTGTTCTTGAGGA | 59.290 | 37.037 | 0.00 | 0.00 | 36.50 | 3.71 |
2114 | 2695 | 7.709613 | TGAGTAGTTACTTTTGTTCTTGAGGAC | 59.290 | 37.037 | 0.00 | 0.00 | 36.50 | 3.85 |
2115 | 2696 | 7.562135 | AGTAGTTACTTTTGTTCTTGAGGACA | 58.438 | 34.615 | 0.00 | 0.00 | 31.13 | 4.02 |
2116 | 2697 | 8.211629 | AGTAGTTACTTTTGTTCTTGAGGACAT | 58.788 | 33.333 | 0.00 | 0.00 | 31.13 | 3.06 |
2117 | 2698 | 7.264373 | AGTTACTTTTGTTCTTGAGGACATG | 57.736 | 36.000 | 0.00 | 0.00 | 0.00 | 3.21 |
2118 | 2699 | 6.263168 | AGTTACTTTTGTTCTTGAGGACATGG | 59.737 | 38.462 | 0.00 | 0.00 | 0.00 | 3.66 |
2119 | 2700 | 3.891366 | ACTTTTGTTCTTGAGGACATGGG | 59.109 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
2120 | 2701 | 3.874383 | TTTGTTCTTGAGGACATGGGA | 57.126 | 42.857 | 0.00 | 0.00 | 0.00 | 4.37 |
2121 | 2702 | 3.423539 | TTGTTCTTGAGGACATGGGAG | 57.576 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
2122 | 2703 | 2.619931 | TGTTCTTGAGGACATGGGAGA | 58.380 | 47.619 | 0.00 | 0.00 | 0.00 | 3.71 |
2123 | 2704 | 2.978978 | TGTTCTTGAGGACATGGGAGAA | 59.021 | 45.455 | 0.00 | 0.00 | 0.00 | 2.87 |
2124 | 2705 | 3.008375 | TGTTCTTGAGGACATGGGAGAAG | 59.992 | 47.826 | 0.00 | 0.00 | 0.00 | 2.85 |
2125 | 2706 | 2.907892 | TCTTGAGGACATGGGAGAAGT | 58.092 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
2126 | 2707 | 2.834549 | TCTTGAGGACATGGGAGAAGTC | 59.165 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2127 | 2708 | 2.630889 | TGAGGACATGGGAGAAGTCT | 57.369 | 50.000 | 0.00 | 0.00 | 32.98 | 3.24 |
2128 | 2709 | 2.907892 | TGAGGACATGGGAGAAGTCTT | 58.092 | 47.619 | 0.00 | 0.00 | 32.98 | 3.01 |
2129 | 2710 | 2.568956 | TGAGGACATGGGAGAAGTCTTG | 59.431 | 50.000 | 0.00 | 0.00 | 32.98 | 3.02 |
2130 | 2711 | 1.280421 | AGGACATGGGAGAAGTCTTGC | 59.720 | 52.381 | 0.00 | 0.00 | 32.98 | 4.01 |
2131 | 2712 | 1.280421 | GGACATGGGAGAAGTCTTGCT | 59.720 | 52.381 | 0.00 | 0.00 | 32.98 | 3.91 |
2132 | 2713 | 2.501723 | GGACATGGGAGAAGTCTTGCTA | 59.498 | 50.000 | 0.00 | 0.00 | 32.98 | 3.49 |
2133 | 2714 | 3.135530 | GGACATGGGAGAAGTCTTGCTAT | 59.864 | 47.826 | 0.00 | 0.00 | 32.98 | 2.97 |
2134 | 2715 | 4.384647 | GGACATGGGAGAAGTCTTGCTATT | 60.385 | 45.833 | 0.00 | 0.00 | 32.98 | 1.73 |
2135 | 2716 | 5.163301 | GGACATGGGAGAAGTCTTGCTATTA | 60.163 | 44.000 | 0.00 | 0.00 | 32.98 | 0.98 |
2136 | 2717 | 5.923204 | ACATGGGAGAAGTCTTGCTATTAG | 58.077 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
2137 | 2718 | 5.426833 | ACATGGGAGAAGTCTTGCTATTAGT | 59.573 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2138 | 2719 | 6.611642 | ACATGGGAGAAGTCTTGCTATTAGTA | 59.388 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
2139 | 2720 | 6.716934 | TGGGAGAAGTCTTGCTATTAGTAG | 57.283 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
2140 | 2721 | 6.195700 | TGGGAGAAGTCTTGCTATTAGTAGT | 58.804 | 40.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2141 | 2722 | 6.321690 | TGGGAGAAGTCTTGCTATTAGTAGTC | 59.678 | 42.308 | 0.00 | 0.00 | 0.00 | 2.59 |
2142 | 2723 | 6.321690 | GGGAGAAGTCTTGCTATTAGTAGTCA | 59.678 | 42.308 | 0.00 | 0.00 | 0.00 | 3.41 |
2143 | 2724 | 7.014808 | GGGAGAAGTCTTGCTATTAGTAGTCAT | 59.985 | 40.741 | 0.00 | 0.00 | 0.00 | 3.06 |
2144 | 2725 | 7.865385 | GGAGAAGTCTTGCTATTAGTAGTCATG | 59.135 | 40.741 | 0.00 | 0.00 | 0.00 | 3.07 |
2145 | 2726 | 8.299990 | AGAAGTCTTGCTATTAGTAGTCATGT | 57.700 | 34.615 | 0.00 | 0.00 | 0.00 | 3.21 |
2146 | 2727 | 8.194104 | AGAAGTCTTGCTATTAGTAGTCATGTG | 58.806 | 37.037 | 0.00 | 0.00 | 0.00 | 3.21 |
2147 | 2728 | 7.646548 | AGTCTTGCTATTAGTAGTCATGTGA | 57.353 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
2148 | 2729 | 8.067751 | AGTCTTGCTATTAGTAGTCATGTGAA | 57.932 | 34.615 | 0.00 | 0.00 | 0.00 | 3.18 |
2149 | 2730 | 8.700051 | AGTCTTGCTATTAGTAGTCATGTGAAT | 58.300 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2150 | 2731 | 9.319143 | GTCTTGCTATTAGTAGTCATGTGAATT | 57.681 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
2151 | 2732 | 9.890629 | TCTTGCTATTAGTAGTCATGTGAATTT | 57.109 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
2152 | 2733 | 9.926751 | CTTGCTATTAGTAGTCATGTGAATTTG | 57.073 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
2153 | 2734 | 8.437360 | TGCTATTAGTAGTCATGTGAATTTGG | 57.563 | 34.615 | 0.00 | 0.00 | 0.00 | 3.28 |
2154 | 2735 | 8.046708 | TGCTATTAGTAGTCATGTGAATTTGGT | 58.953 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
2155 | 2736 | 9.542462 | GCTATTAGTAGTCATGTGAATTTGGTA | 57.458 | 33.333 | 0.00 | 0.00 | 0.00 | 3.25 |
2159 | 2740 | 7.539712 | AGTAGTCATGTGAATTTGGTATTCG | 57.460 | 36.000 | 0.00 | 0.00 | 0.00 | 3.34 |
2160 | 2741 | 7.103641 | AGTAGTCATGTGAATTTGGTATTCGT | 58.896 | 34.615 | 0.00 | 0.00 | 0.00 | 3.85 |
2161 | 2742 | 6.422776 | AGTCATGTGAATTTGGTATTCGTC | 57.577 | 37.500 | 0.00 | 0.00 | 0.00 | 4.20 |
2162 | 2743 | 5.354234 | AGTCATGTGAATTTGGTATTCGTCC | 59.646 | 40.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2163 | 2744 | 4.331443 | TCATGTGAATTTGGTATTCGTCCG | 59.669 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
2164 | 2745 | 3.927854 | TGTGAATTTGGTATTCGTCCGA | 58.072 | 40.909 | 0.00 | 0.00 | 0.00 | 4.55 |
2165 | 2746 | 4.509616 | TGTGAATTTGGTATTCGTCCGAT | 58.490 | 39.130 | 0.00 | 0.00 | 0.00 | 4.18 |
2166 | 2747 | 5.662456 | TGTGAATTTGGTATTCGTCCGATA | 58.338 | 37.500 | 0.00 | 0.00 | 0.00 | 2.92 |
2167 | 2748 | 6.285224 | TGTGAATTTGGTATTCGTCCGATAT | 58.715 | 36.000 | 0.00 | 0.00 | 0.00 | 1.63 |
2168 | 2749 | 6.764085 | TGTGAATTTGGTATTCGTCCGATATT | 59.236 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
2169 | 2750 | 7.281324 | TGTGAATTTGGTATTCGTCCGATATTT | 59.719 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2170 | 2751 | 8.126700 | GTGAATTTGGTATTCGTCCGATATTTT | 58.873 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
2171 | 2752 | 8.126074 | TGAATTTGGTATTCGTCCGATATTTTG | 58.874 | 33.333 | 0.00 | 0.00 | 0.00 | 2.44 |
2172 | 2753 | 7.795482 | ATTTGGTATTCGTCCGATATTTTGA | 57.205 | 32.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2173 | 2754 | 7.795482 | TTTGGTATTCGTCCGATATTTTGAT | 57.205 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2174 | 2755 | 6.779115 | TGGTATTCGTCCGATATTTTGATG | 57.221 | 37.500 | 0.00 | 0.00 | 0.00 | 3.07 |
2175 | 2756 | 6.517605 | TGGTATTCGTCCGATATTTTGATGA | 58.482 | 36.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2176 | 2757 | 6.645003 | TGGTATTCGTCCGATATTTTGATGAG | 59.355 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
2177 | 2758 | 6.866770 | GGTATTCGTCCGATATTTTGATGAGA | 59.133 | 38.462 | 0.00 | 0.00 | 0.00 | 3.27 |
2178 | 2759 | 7.545965 | GGTATTCGTCCGATATTTTGATGAGAT | 59.454 | 37.037 | 0.00 | 0.00 | 0.00 | 2.75 |
2179 | 2760 | 6.769608 | TTCGTCCGATATTTTGATGAGATG | 57.230 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
2180 | 2761 | 5.842907 | TCGTCCGATATTTTGATGAGATGT | 58.157 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
2181 | 2762 | 6.977213 | TCGTCCGATATTTTGATGAGATGTA | 58.023 | 36.000 | 0.00 | 0.00 | 0.00 | 2.29 |
2182 | 2763 | 7.602753 | TCGTCCGATATTTTGATGAGATGTAT | 58.397 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
2183 | 2764 | 7.542130 | TCGTCCGATATTTTGATGAGATGTATG | 59.458 | 37.037 | 0.00 | 0.00 | 0.00 | 2.39 |
2184 | 2765 | 7.329471 | CGTCCGATATTTTGATGAGATGTATGT | 59.671 | 37.037 | 0.00 | 0.00 | 0.00 | 2.29 |
2185 | 2766 | 8.993121 | GTCCGATATTTTGATGAGATGTATGTT | 58.007 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
2186 | 2767 | 8.992073 | TCCGATATTTTGATGAGATGTATGTTG | 58.008 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
2187 | 2768 | 8.777413 | CCGATATTTTGATGAGATGTATGTTGT | 58.223 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
2188 | 2769 | 9.803130 | CGATATTTTGATGAGATGTATGTTGTC | 57.197 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
2192 | 2773 | 8.484641 | TTTTGATGAGATGTATGTTGTCTCTC | 57.515 | 34.615 | 0.00 | 0.00 | 39.24 | 3.20 |
2193 | 2774 | 6.154203 | TGATGAGATGTATGTTGTCTCTCC | 57.846 | 41.667 | 0.00 | 0.00 | 39.24 | 3.71 |
2194 | 2775 | 5.896106 | TGATGAGATGTATGTTGTCTCTCCT | 59.104 | 40.000 | 0.00 | 0.00 | 39.24 | 3.69 |
2195 | 2776 | 5.843673 | TGAGATGTATGTTGTCTCTCCTC | 57.156 | 43.478 | 0.00 | 0.00 | 39.24 | 3.71 |
2196 | 2777 | 5.514169 | TGAGATGTATGTTGTCTCTCCTCT | 58.486 | 41.667 | 0.00 | 0.00 | 39.24 | 3.69 |
2197 | 2778 | 6.663734 | TGAGATGTATGTTGTCTCTCCTCTA | 58.336 | 40.000 | 0.00 | 0.00 | 39.24 | 2.43 |
2198 | 2779 | 6.770303 | TGAGATGTATGTTGTCTCTCCTCTAG | 59.230 | 42.308 | 0.00 | 0.00 | 39.24 | 2.43 |
2199 | 2780 | 6.668645 | AGATGTATGTTGTCTCTCCTCTAGT | 58.331 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2200 | 2781 | 6.545666 | AGATGTATGTTGTCTCTCCTCTAGTG | 59.454 | 42.308 | 0.00 | 0.00 | 0.00 | 2.74 |
2201 | 2782 | 4.950475 | TGTATGTTGTCTCTCCTCTAGTGG | 59.050 | 45.833 | 4.35 | 4.35 | 0.00 | 4.00 |
2202 | 2783 | 3.527507 | TGTTGTCTCTCCTCTAGTGGT | 57.472 | 47.619 | 10.56 | 0.00 | 0.00 | 4.16 |
2203 | 2784 | 3.157881 | TGTTGTCTCTCCTCTAGTGGTG | 58.842 | 50.000 | 10.56 | 8.48 | 0.00 | 4.17 |
2204 | 2785 | 3.158676 | GTTGTCTCTCCTCTAGTGGTGT | 58.841 | 50.000 | 10.56 | 0.00 | 0.00 | 4.16 |
2205 | 2786 | 3.527507 | TGTCTCTCCTCTAGTGGTGTT | 57.472 | 47.619 | 10.56 | 0.00 | 0.00 | 3.32 |
2206 | 2787 | 4.652679 | TGTCTCTCCTCTAGTGGTGTTA | 57.347 | 45.455 | 10.56 | 0.00 | 0.00 | 2.41 |
2207 | 2788 | 5.194473 | TGTCTCTCCTCTAGTGGTGTTAT | 57.806 | 43.478 | 10.56 | 0.00 | 0.00 | 1.89 |
2208 | 2789 | 4.950475 | TGTCTCTCCTCTAGTGGTGTTATG | 59.050 | 45.833 | 10.56 | 2.51 | 0.00 | 1.90 |
2209 | 2790 | 4.951094 | GTCTCTCCTCTAGTGGTGTTATGT | 59.049 | 45.833 | 10.56 | 0.00 | 0.00 | 2.29 |
2210 | 2791 | 4.950475 | TCTCTCCTCTAGTGGTGTTATGTG | 59.050 | 45.833 | 10.56 | 0.00 | 0.00 | 3.21 |
2211 | 2792 | 4.930696 | TCTCCTCTAGTGGTGTTATGTGA | 58.069 | 43.478 | 10.56 | 0.00 | 0.00 | 3.58 |
2212 | 2793 | 5.330233 | TCTCCTCTAGTGGTGTTATGTGAA | 58.670 | 41.667 | 10.56 | 0.00 | 0.00 | 3.18 |
2213 | 2794 | 5.185249 | TCTCCTCTAGTGGTGTTATGTGAAC | 59.815 | 44.000 | 10.56 | 0.00 | 0.00 | 3.18 |
2214 | 2795 | 4.082408 | TCCTCTAGTGGTGTTATGTGAACG | 60.082 | 45.833 | 10.56 | 0.00 | 0.00 | 3.95 |
2215 | 2796 | 4.321750 | CCTCTAGTGGTGTTATGTGAACGT | 60.322 | 45.833 | 2.47 | 0.00 | 0.00 | 3.99 |
2216 | 2797 | 4.801891 | TCTAGTGGTGTTATGTGAACGTC | 58.198 | 43.478 | 0.00 | 0.00 | 0.00 | 4.34 |
2217 | 2798 | 2.400399 | AGTGGTGTTATGTGAACGTCG | 58.600 | 47.619 | 0.00 | 0.00 | 0.00 | 5.12 |
2218 | 2799 | 2.034939 | AGTGGTGTTATGTGAACGTCGA | 59.965 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
2219 | 2800 | 2.154389 | GTGGTGTTATGTGAACGTCGAC | 59.846 | 50.000 | 5.18 | 5.18 | 0.00 | 4.20 |
2220 | 2801 | 2.034939 | TGGTGTTATGTGAACGTCGACT | 59.965 | 45.455 | 14.70 | 0.00 | 0.00 | 4.18 |
2221 | 2802 | 3.252944 | TGGTGTTATGTGAACGTCGACTA | 59.747 | 43.478 | 14.70 | 0.00 | 0.00 | 2.59 |
2222 | 2803 | 3.605486 | GGTGTTATGTGAACGTCGACTAC | 59.395 | 47.826 | 14.70 | 7.93 | 0.00 | 2.73 |
2223 | 2804 | 4.221342 | GTGTTATGTGAACGTCGACTACA | 58.779 | 43.478 | 14.70 | 13.11 | 0.00 | 2.74 |
2224 | 2805 | 4.855388 | GTGTTATGTGAACGTCGACTACAT | 59.145 | 41.667 | 14.70 | 18.39 | 36.15 | 2.29 |
2225 | 2806 | 4.854839 | TGTTATGTGAACGTCGACTACATG | 59.145 | 41.667 | 23.07 | 9.45 | 34.22 | 3.21 |
2226 | 2807 | 3.842732 | ATGTGAACGTCGACTACATGA | 57.157 | 42.857 | 14.70 | 3.04 | 31.34 | 3.07 |
2227 | 2808 | 2.924903 | TGTGAACGTCGACTACATGAC | 58.075 | 47.619 | 14.70 | 3.45 | 0.00 | 3.06 |
2228 | 2809 | 2.291190 | TGTGAACGTCGACTACATGACA | 59.709 | 45.455 | 14.70 | 6.01 | 34.78 | 3.58 |
2229 | 2810 | 2.655474 | GTGAACGTCGACTACATGACAC | 59.345 | 50.000 | 14.70 | 9.84 | 34.78 | 3.67 |
2230 | 2811 | 2.551032 | TGAACGTCGACTACATGACACT | 59.449 | 45.455 | 14.70 | 0.00 | 34.78 | 3.55 |
2231 | 2812 | 3.004002 | TGAACGTCGACTACATGACACTT | 59.996 | 43.478 | 14.70 | 0.00 | 34.78 | 3.16 |
2232 | 2813 | 3.198863 | ACGTCGACTACATGACACTTC | 57.801 | 47.619 | 14.70 | 0.00 | 34.78 | 3.01 |
2233 | 2814 | 2.551032 | ACGTCGACTACATGACACTTCA | 59.449 | 45.455 | 14.70 | 0.00 | 34.78 | 3.02 |
2234 | 2815 | 2.909244 | CGTCGACTACATGACACTTCAC | 59.091 | 50.000 | 14.70 | 0.00 | 33.38 | 3.18 |
2235 | 2816 | 3.243336 | GTCGACTACATGACACTTCACC | 58.757 | 50.000 | 8.70 | 0.00 | 33.38 | 4.02 |
2236 | 2817 | 2.888414 | TCGACTACATGACACTTCACCA | 59.112 | 45.455 | 0.00 | 0.00 | 33.38 | 4.17 |
2237 | 2818 | 3.509967 | TCGACTACATGACACTTCACCAT | 59.490 | 43.478 | 0.00 | 0.00 | 33.38 | 3.55 |
2238 | 2819 | 4.021456 | TCGACTACATGACACTTCACCATT | 60.021 | 41.667 | 0.00 | 0.00 | 33.38 | 3.16 |
2239 | 2820 | 5.184287 | TCGACTACATGACACTTCACCATTA | 59.816 | 40.000 | 0.00 | 0.00 | 33.38 | 1.90 |
2240 | 2821 | 6.042777 | CGACTACATGACACTTCACCATTAT | 58.957 | 40.000 | 0.00 | 0.00 | 33.38 | 1.28 |
2241 | 2822 | 6.535150 | CGACTACATGACACTTCACCATTATT | 59.465 | 38.462 | 0.00 | 0.00 | 33.38 | 1.40 |
2242 | 2823 | 7.064609 | CGACTACATGACACTTCACCATTATTT | 59.935 | 37.037 | 0.00 | 0.00 | 33.38 | 1.40 |
2243 | 2824 | 8.044060 | ACTACATGACACTTCACCATTATTTG | 57.956 | 34.615 | 0.00 | 0.00 | 33.38 | 2.32 |
2255 | 2836 | 4.453480 | CCATTATTTGGGCCTAGAGGAA | 57.547 | 45.455 | 4.53 | 0.00 | 42.33 | 3.36 |
2256 | 2837 | 4.401925 | CCATTATTTGGGCCTAGAGGAAG | 58.598 | 47.826 | 4.53 | 0.00 | 42.33 | 3.46 |
2257 | 2838 | 4.401925 | CATTATTTGGGCCTAGAGGAAGG | 58.598 | 47.826 | 4.53 | 0.00 | 39.87 | 3.46 |
2265 | 2846 | 0.475906 | CCTAGAGGAAGGCATTGGGG | 59.524 | 60.000 | 0.00 | 0.00 | 37.39 | 4.96 |
2266 | 2847 | 1.511613 | CTAGAGGAAGGCATTGGGGA | 58.488 | 55.000 | 0.00 | 0.00 | 0.00 | 4.81 |
2267 | 2848 | 1.419387 | CTAGAGGAAGGCATTGGGGAG | 59.581 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
2268 | 2849 | 0.551131 | AGAGGAAGGCATTGGGGAGT | 60.551 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2269 | 2850 | 1.213296 | GAGGAAGGCATTGGGGAGTA | 58.787 | 55.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2270 | 2851 | 1.564348 | GAGGAAGGCATTGGGGAGTAA | 59.436 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
2271 | 2852 | 2.175715 | GAGGAAGGCATTGGGGAGTAAT | 59.824 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
2272 | 2853 | 3.394606 | GAGGAAGGCATTGGGGAGTAATA | 59.605 | 47.826 | 0.00 | 0.00 | 0.00 | 0.98 |
2273 | 2854 | 3.791545 | AGGAAGGCATTGGGGAGTAATAA | 59.208 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
2274 | 2855 | 4.141158 | AGGAAGGCATTGGGGAGTAATAAG | 60.141 | 45.833 | 0.00 | 0.00 | 0.00 | 1.73 |
2275 | 2856 | 4.386424 | GGAAGGCATTGGGGAGTAATAAGT | 60.386 | 45.833 | 0.00 | 0.00 | 0.00 | 2.24 |
2276 | 2857 | 5.163131 | GGAAGGCATTGGGGAGTAATAAGTA | 60.163 | 44.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2277 | 2858 | 5.568620 | AGGCATTGGGGAGTAATAAGTAG | 57.431 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
2278 | 2859 | 5.224441 | AGGCATTGGGGAGTAATAAGTAGA | 58.776 | 41.667 | 0.00 | 0.00 | 0.00 | 2.59 |
2279 | 2860 | 5.852250 | AGGCATTGGGGAGTAATAAGTAGAT | 59.148 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2280 | 2861 | 5.940470 | GGCATTGGGGAGTAATAAGTAGATG | 59.060 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2281 | 2862 | 6.239887 | GGCATTGGGGAGTAATAAGTAGATGA | 60.240 | 42.308 | 0.00 | 0.00 | 0.00 | 2.92 |
2282 | 2863 | 7.398024 | GCATTGGGGAGTAATAAGTAGATGAT | 58.602 | 38.462 | 0.00 | 0.00 | 0.00 | 2.45 |
2283 | 2864 | 7.335422 | GCATTGGGGAGTAATAAGTAGATGATG | 59.665 | 40.741 | 0.00 | 0.00 | 0.00 | 3.07 |
2284 | 2865 | 6.935240 | TGGGGAGTAATAAGTAGATGATGG | 57.065 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
2285 | 2866 | 5.785423 | TGGGGAGTAATAAGTAGATGATGGG | 59.215 | 44.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2286 | 2867 | 5.785940 | GGGGAGTAATAAGTAGATGATGGGT | 59.214 | 44.000 | 0.00 | 0.00 | 0.00 | 4.51 |
2287 | 2868 | 6.272558 | GGGGAGTAATAAGTAGATGATGGGTT | 59.727 | 42.308 | 0.00 | 0.00 | 0.00 | 4.11 |
2288 | 2869 | 7.162082 | GGGAGTAATAAGTAGATGATGGGTTG | 58.838 | 42.308 | 0.00 | 0.00 | 0.00 | 3.77 |
2289 | 2870 | 6.651225 | GGAGTAATAAGTAGATGATGGGTTGC | 59.349 | 42.308 | 0.00 | 0.00 | 0.00 | 4.17 |
2290 | 2871 | 7.380423 | AGTAATAAGTAGATGATGGGTTGCT | 57.620 | 36.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2291 | 2872 | 8.492415 | AGTAATAAGTAGATGATGGGTTGCTA | 57.508 | 34.615 | 0.00 | 0.00 | 0.00 | 3.49 |
2292 | 2873 | 8.589338 | AGTAATAAGTAGATGATGGGTTGCTAG | 58.411 | 37.037 | 0.00 | 0.00 | 0.00 | 3.42 |
2293 | 2874 | 7.618019 | AATAAGTAGATGATGGGTTGCTAGA | 57.382 | 36.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2294 | 2875 | 5.543507 | AAGTAGATGATGGGTTGCTAGAG | 57.456 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
2295 | 2876 | 4.551671 | AGTAGATGATGGGTTGCTAGAGT | 58.448 | 43.478 | 0.00 | 0.00 | 0.00 | 3.24 |
2296 | 2877 | 3.834489 | AGATGATGGGTTGCTAGAGTG | 57.166 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
2297 | 2878 | 3.378512 | AGATGATGGGTTGCTAGAGTGA | 58.621 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
2298 | 2879 | 3.133721 | AGATGATGGGTTGCTAGAGTGAC | 59.866 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
2299 | 2880 | 2.256306 | TGATGGGTTGCTAGAGTGACA | 58.744 | 47.619 | 0.00 | 0.00 | 0.00 | 3.58 |
2300 | 2881 | 2.234661 | TGATGGGTTGCTAGAGTGACAG | 59.765 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2301 | 2882 | 2.009681 | TGGGTTGCTAGAGTGACAGA | 57.990 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2302 | 2883 | 2.325484 | TGGGTTGCTAGAGTGACAGAA | 58.675 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
2303 | 2884 | 2.300152 | TGGGTTGCTAGAGTGACAGAAG | 59.700 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2304 | 2885 | 2.342179 | GGTTGCTAGAGTGACAGAAGC | 58.658 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
2305 | 2886 | 2.028567 | GGTTGCTAGAGTGACAGAAGCT | 60.029 | 50.000 | 0.00 | 0.00 | 34.28 | 3.74 |
2306 | 2887 | 3.556004 | GGTTGCTAGAGTGACAGAAGCTT | 60.556 | 47.826 | 0.00 | 0.00 | 34.28 | 3.74 |
2307 | 2888 | 4.322049 | GGTTGCTAGAGTGACAGAAGCTTA | 60.322 | 45.833 | 0.00 | 0.00 | 34.28 | 3.09 |
2308 | 2889 | 5.230942 | GTTGCTAGAGTGACAGAAGCTTAA | 58.769 | 41.667 | 0.00 | 0.00 | 34.28 | 1.85 |
2309 | 2890 | 5.468540 | TGCTAGAGTGACAGAAGCTTAAA | 57.531 | 39.130 | 0.00 | 0.00 | 34.28 | 1.52 |
2310 | 2891 | 5.230942 | TGCTAGAGTGACAGAAGCTTAAAC | 58.769 | 41.667 | 0.00 | 0.00 | 34.28 | 2.01 |
2311 | 2892 | 4.627900 | GCTAGAGTGACAGAAGCTTAAACC | 59.372 | 45.833 | 0.00 | 0.00 | 0.00 | 3.27 |
2312 | 2893 | 4.009370 | AGAGTGACAGAAGCTTAAACCC | 57.991 | 45.455 | 0.00 | 0.00 | 0.00 | 4.11 |
2313 | 2894 | 3.648545 | AGAGTGACAGAAGCTTAAACCCT | 59.351 | 43.478 | 0.00 | 0.00 | 0.00 | 4.34 |
2314 | 2895 | 4.838986 | AGAGTGACAGAAGCTTAAACCCTA | 59.161 | 41.667 | 0.00 | 0.00 | 0.00 | 3.53 |
2315 | 2896 | 5.046950 | AGAGTGACAGAAGCTTAAACCCTAG | 60.047 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2316 | 2897 | 4.593634 | AGTGACAGAAGCTTAAACCCTAGT | 59.406 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
2317 | 2898 | 5.071923 | AGTGACAGAAGCTTAAACCCTAGTT | 59.928 | 40.000 | 0.00 | 0.00 | 38.03 | 2.24 |
2319 | 2900 | 6.932960 | GTGACAGAAGCTTAAACCCTAGTTTA | 59.067 | 38.462 | 0.00 | 0.00 | 44.44 | 2.01 |
2320 | 2901 | 7.606839 | GTGACAGAAGCTTAAACCCTAGTTTAT | 59.393 | 37.037 | 0.00 | 0.00 | 45.50 | 1.40 |
2321 | 2902 | 7.606456 | TGACAGAAGCTTAAACCCTAGTTTATG | 59.394 | 37.037 | 0.00 | 3.88 | 45.50 | 1.90 |
2327 | 2908 | 3.842732 | AAACCCTAGTTTATGCGTTGC | 57.157 | 42.857 | 0.00 | 0.00 | 44.44 | 4.17 |
2328 | 2909 | 2.781681 | ACCCTAGTTTATGCGTTGCT | 57.218 | 45.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2329 | 2910 | 3.067684 | ACCCTAGTTTATGCGTTGCTT | 57.932 | 42.857 | 0.00 | 0.00 | 0.00 | 3.91 |
2330 | 2911 | 3.007635 | ACCCTAGTTTATGCGTTGCTTC | 58.992 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
2331 | 2912 | 2.030457 | CCCTAGTTTATGCGTTGCTTCG | 59.970 | 50.000 | 0.00 | 0.00 | 0.00 | 3.79 |
2332 | 2913 | 2.671396 | CCTAGTTTATGCGTTGCTTCGT | 59.329 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
2333 | 2914 | 3.861113 | CCTAGTTTATGCGTTGCTTCGTA | 59.139 | 43.478 | 0.00 | 0.00 | 0.00 | 3.43 |
2334 | 2915 | 4.327898 | CCTAGTTTATGCGTTGCTTCGTAA | 59.672 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
2335 | 2916 | 4.322101 | AGTTTATGCGTTGCTTCGTAAG | 57.678 | 40.909 | 0.00 | 0.00 | 0.00 | 2.34 |
2336 | 2917 | 3.124636 | AGTTTATGCGTTGCTTCGTAAGG | 59.875 | 43.478 | 0.00 | 0.00 | 38.47 | 2.69 |
2337 | 2918 | 1.647346 | TATGCGTTGCTTCGTAAGGG | 58.353 | 50.000 | 0.00 | 0.00 | 38.47 | 3.95 |
2338 | 2919 | 1.024579 | ATGCGTTGCTTCGTAAGGGG | 61.025 | 55.000 | 3.52 | 0.00 | 38.47 | 4.79 |
2339 | 2920 | 3.035576 | GCGTTGCTTCGTAAGGGGC | 62.036 | 63.158 | 3.52 | 0.00 | 38.47 | 5.80 |
2340 | 2921 | 1.375523 | CGTTGCTTCGTAAGGGGCT | 60.376 | 57.895 | 0.00 | 0.00 | 36.51 | 5.19 |
2341 | 2922 | 1.635663 | CGTTGCTTCGTAAGGGGCTG | 61.636 | 60.000 | 0.00 | 0.00 | 36.51 | 4.85 |
2342 | 2923 | 0.321298 | GTTGCTTCGTAAGGGGCTGA | 60.321 | 55.000 | 0.00 | 0.00 | 36.51 | 4.26 |
2343 | 2924 | 0.618458 | TTGCTTCGTAAGGGGCTGAT | 59.382 | 50.000 | 0.00 | 0.00 | 36.51 | 2.90 |
2344 | 2925 | 0.618458 | TGCTTCGTAAGGGGCTGATT | 59.382 | 50.000 | 0.00 | 0.00 | 36.51 | 2.57 |
2345 | 2926 | 1.004277 | TGCTTCGTAAGGGGCTGATTT | 59.996 | 47.619 | 0.00 | 0.00 | 36.51 | 2.17 |
2346 | 2927 | 1.401905 | GCTTCGTAAGGGGCTGATTTG | 59.598 | 52.381 | 0.00 | 0.00 | 38.47 | 2.32 |
2347 | 2928 | 2.017049 | CTTCGTAAGGGGCTGATTTGG | 58.983 | 52.381 | 0.00 | 0.00 | 38.47 | 3.28 |
2348 | 2929 | 1.281419 | TCGTAAGGGGCTGATTTGGA | 58.719 | 50.000 | 0.00 | 0.00 | 38.47 | 3.53 |
2349 | 2930 | 1.843851 | TCGTAAGGGGCTGATTTGGAT | 59.156 | 47.619 | 0.00 | 0.00 | 38.47 | 3.41 |
2350 | 2931 | 2.158813 | TCGTAAGGGGCTGATTTGGATC | 60.159 | 50.000 | 0.00 | 0.00 | 38.47 | 3.36 |
2351 | 2932 | 2.587522 | GTAAGGGGCTGATTTGGATCC | 58.412 | 52.381 | 4.20 | 4.20 | 0.00 | 3.36 |
2352 | 2933 | 1.009997 | AAGGGGCTGATTTGGATCCA | 58.990 | 50.000 | 11.44 | 11.44 | 0.00 | 3.41 |
2353 | 2934 | 1.238615 | AGGGGCTGATTTGGATCCAT | 58.761 | 50.000 | 17.06 | 0.06 | 0.00 | 3.41 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
483 | 484 | 4.421554 | TAGCTCCCCTGCCTGCCT | 62.422 | 66.667 | 0.00 | 0.00 | 0.00 | 4.75 |
484 | 485 | 4.182433 | GTAGCTCCCCTGCCTGCC | 62.182 | 72.222 | 0.00 | 0.00 | 0.00 | 4.85 |
485 | 486 | 4.182433 | GGTAGCTCCCCTGCCTGC | 62.182 | 72.222 | 0.00 | 0.00 | 42.51 | 4.85 |
486 | 487 | 3.854669 | CGGTAGCTCCCCTGCCTG | 61.855 | 72.222 | 0.00 | 0.00 | 43.52 | 4.85 |
491 | 492 | 4.541648 | ATCGCCGGTAGCTCCCCT | 62.542 | 66.667 | 1.90 | 0.00 | 40.39 | 4.79 |
492 | 493 | 4.301027 | CATCGCCGGTAGCTCCCC | 62.301 | 72.222 | 1.90 | 0.00 | 40.39 | 4.81 |
493 | 494 | 4.971125 | GCATCGCCGGTAGCTCCC | 62.971 | 72.222 | 1.90 | 0.00 | 40.39 | 4.30 |
615 | 930 | 0.179051 | CCCTCGCCTCTACTACTCGT | 60.179 | 60.000 | 0.00 | 0.00 | 0.00 | 4.18 |
700 | 1016 | 2.353323 | CTTCTGTTGCTGATGCTGCTA | 58.647 | 47.619 | 0.00 | 0.00 | 40.48 | 3.49 |
742 | 1120 | 1.735376 | GCTGCGCTACTGCCCTACTA | 61.735 | 60.000 | 9.73 | 0.00 | 37.26 | 1.82 |
745 | 1123 | 3.074369 | TGCTGCGCTACTGCCCTA | 61.074 | 61.111 | 9.73 | 0.00 | 42.24 | 3.53 |
785 | 1163 | 4.471908 | TGCATCATCACGCCCGCT | 62.472 | 61.111 | 0.00 | 0.00 | 0.00 | 5.52 |
789 | 1167 | 2.406401 | GTGCTGCATCATCACGCC | 59.594 | 61.111 | 5.27 | 0.00 | 0.00 | 5.68 |
1060 | 1438 | 2.455557 | CACCACATCAAAAGCCCCATA | 58.544 | 47.619 | 0.00 | 0.00 | 0.00 | 2.74 |
1144 | 1522 | 1.080298 | CTACCCGTCGGCGTTCTTT | 60.080 | 57.895 | 9.28 | 0.00 | 36.15 | 2.52 |
1145 | 1523 | 1.930908 | CTCTACCCGTCGGCGTTCTT | 61.931 | 60.000 | 9.28 | 0.00 | 36.15 | 2.52 |
1191 | 1571 | 1.377725 | CAAGCAAGGACGCCTCCAT | 60.378 | 57.895 | 4.47 | 0.00 | 39.39 | 3.41 |
1204 | 1584 | 0.840288 | TCTAAGGCCCAGGTCAAGCA | 60.840 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
1324 | 1885 | 4.473520 | CTCCCTCCCGTGCGCAAT | 62.474 | 66.667 | 14.00 | 0.00 | 0.00 | 3.56 |
1393 | 1960 | 0.527169 | GCCTACTTTACCTCGTCGCC | 60.527 | 60.000 | 0.00 | 0.00 | 0.00 | 5.54 |
1394 | 1961 | 0.527169 | GGCCTACTTTACCTCGTCGC | 60.527 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
1516 | 2085 | 1.985895 | CCACTTACCCCACTTCCTCTT | 59.014 | 52.381 | 0.00 | 0.00 | 0.00 | 2.85 |
1525 | 2094 | 1.131303 | CCACACTCCCACTTACCCCA | 61.131 | 60.000 | 0.00 | 0.00 | 0.00 | 4.96 |
1550 | 2119 | 6.039270 | CCTTTGATGACAACACTACTTTTGGA | 59.961 | 38.462 | 0.00 | 0.00 | 35.63 | 3.53 |
1939 | 2519 | 7.201145 | TCGAAACCGGTTCAAATTCAAAATTA | 58.799 | 30.769 | 22.53 | 0.00 | 35.83 | 1.40 |
2046 | 2627 | 9.928618 | TTCATAATCAAAGGGGTATTATGTGAA | 57.071 | 29.630 | 11.83 | 0.00 | 41.30 | 3.18 |
2052 | 2633 | 9.707957 | AACATGTTCATAATCAAAGGGGTATTA | 57.292 | 29.630 | 4.92 | 0.00 | 0.00 | 0.98 |
2053 | 2634 | 8.608185 | AACATGTTCATAATCAAAGGGGTATT | 57.392 | 30.769 | 4.92 | 0.00 | 0.00 | 1.89 |
2054 | 2635 | 8.608185 | AAACATGTTCATAATCAAAGGGGTAT | 57.392 | 30.769 | 12.39 | 0.00 | 0.00 | 2.73 |
2055 | 2636 | 9.707957 | ATAAACATGTTCATAATCAAAGGGGTA | 57.292 | 29.630 | 12.39 | 0.00 | 0.00 | 3.69 |
2056 | 2637 | 6.933514 | AAACATGTTCATAATCAAAGGGGT | 57.066 | 33.333 | 12.39 | 0.00 | 0.00 | 4.95 |
2057 | 2638 | 7.439056 | GCATAAACATGTTCATAATCAAAGGGG | 59.561 | 37.037 | 12.39 | 0.00 | 0.00 | 4.79 |
2058 | 2639 | 8.199449 | AGCATAAACATGTTCATAATCAAAGGG | 58.801 | 33.333 | 12.39 | 0.00 | 0.00 | 3.95 |
2059 | 2640 | 9.590451 | AAGCATAAACATGTTCATAATCAAAGG | 57.410 | 29.630 | 12.39 | 0.00 | 0.00 | 3.11 |
2062 | 2643 | 9.926158 | ACAAAGCATAAACATGTTCATAATCAA | 57.074 | 25.926 | 12.39 | 0.00 | 0.00 | 2.57 |
2063 | 2644 | 9.356433 | CACAAAGCATAAACATGTTCATAATCA | 57.644 | 29.630 | 12.39 | 0.00 | 0.00 | 2.57 |
2064 | 2645 | 9.571810 | TCACAAAGCATAAACATGTTCATAATC | 57.428 | 29.630 | 12.39 | 0.00 | 0.00 | 1.75 |
2065 | 2646 | 9.577110 | CTCACAAAGCATAAACATGTTCATAAT | 57.423 | 29.630 | 12.39 | 0.00 | 0.00 | 1.28 |
2066 | 2647 | 8.575589 | ACTCACAAAGCATAAACATGTTCATAA | 58.424 | 29.630 | 12.39 | 0.00 | 0.00 | 1.90 |
2067 | 2648 | 8.109705 | ACTCACAAAGCATAAACATGTTCATA | 57.890 | 30.769 | 12.39 | 1.68 | 0.00 | 2.15 |
2068 | 2649 | 6.985117 | ACTCACAAAGCATAAACATGTTCAT | 58.015 | 32.000 | 12.39 | 0.00 | 0.00 | 2.57 |
2069 | 2650 | 6.389830 | ACTCACAAAGCATAAACATGTTCA | 57.610 | 33.333 | 12.39 | 0.00 | 0.00 | 3.18 |
2070 | 2651 | 7.584987 | ACTACTCACAAAGCATAAACATGTTC | 58.415 | 34.615 | 12.39 | 0.00 | 0.00 | 3.18 |
2071 | 2652 | 7.510549 | ACTACTCACAAAGCATAAACATGTT | 57.489 | 32.000 | 4.92 | 4.92 | 0.00 | 2.71 |
2072 | 2653 | 7.510549 | AACTACTCACAAAGCATAAACATGT | 57.489 | 32.000 | 0.00 | 0.00 | 0.00 | 3.21 |
2073 | 2654 | 8.721478 | AGTAACTACTCACAAAGCATAAACATG | 58.279 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
2074 | 2655 | 8.848474 | AGTAACTACTCACAAAGCATAAACAT | 57.152 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
2075 | 2656 | 8.671384 | AAGTAACTACTCACAAAGCATAAACA | 57.329 | 30.769 | 0.00 | 0.00 | 34.99 | 2.83 |
2076 | 2657 | 9.946165 | AAAAGTAACTACTCACAAAGCATAAAC | 57.054 | 29.630 | 0.00 | 0.00 | 34.99 | 2.01 |
2077 | 2658 | 9.944663 | CAAAAGTAACTACTCACAAAGCATAAA | 57.055 | 29.630 | 0.00 | 0.00 | 34.99 | 1.40 |
2078 | 2659 | 9.116067 | ACAAAAGTAACTACTCACAAAGCATAA | 57.884 | 29.630 | 0.00 | 0.00 | 34.99 | 1.90 |
2079 | 2660 | 8.671384 | ACAAAAGTAACTACTCACAAAGCATA | 57.329 | 30.769 | 0.00 | 0.00 | 34.99 | 3.14 |
2080 | 2661 | 7.568199 | ACAAAAGTAACTACTCACAAAGCAT | 57.432 | 32.000 | 0.00 | 0.00 | 34.99 | 3.79 |
2081 | 2662 | 6.995511 | ACAAAAGTAACTACTCACAAAGCA | 57.004 | 33.333 | 0.00 | 0.00 | 34.99 | 3.91 |
2082 | 2663 | 7.694886 | AGAACAAAAGTAACTACTCACAAAGC | 58.305 | 34.615 | 0.00 | 0.00 | 34.99 | 3.51 |
2083 | 2664 | 9.490663 | CAAGAACAAAAGTAACTACTCACAAAG | 57.509 | 33.333 | 0.00 | 0.00 | 34.99 | 2.77 |
2084 | 2665 | 9.221933 | TCAAGAACAAAAGTAACTACTCACAAA | 57.778 | 29.630 | 0.00 | 0.00 | 34.99 | 2.83 |
2085 | 2666 | 8.780846 | TCAAGAACAAAAGTAACTACTCACAA | 57.219 | 30.769 | 0.00 | 0.00 | 34.99 | 3.33 |
2086 | 2667 | 7.494625 | CCTCAAGAACAAAAGTAACTACTCACA | 59.505 | 37.037 | 0.00 | 0.00 | 34.99 | 3.58 |
2087 | 2668 | 7.709613 | TCCTCAAGAACAAAAGTAACTACTCAC | 59.290 | 37.037 | 0.00 | 0.00 | 34.99 | 3.51 |
2088 | 2669 | 7.709613 | GTCCTCAAGAACAAAAGTAACTACTCA | 59.290 | 37.037 | 0.00 | 0.00 | 34.99 | 3.41 |
2089 | 2670 | 7.709613 | TGTCCTCAAGAACAAAAGTAACTACTC | 59.290 | 37.037 | 0.00 | 0.00 | 34.99 | 2.59 |
2090 | 2671 | 7.562135 | TGTCCTCAAGAACAAAAGTAACTACT | 58.438 | 34.615 | 0.00 | 0.00 | 38.39 | 2.57 |
2091 | 2672 | 7.781548 | TGTCCTCAAGAACAAAAGTAACTAC | 57.218 | 36.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2092 | 2673 | 7.444183 | CCATGTCCTCAAGAACAAAAGTAACTA | 59.556 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
2093 | 2674 | 6.263168 | CCATGTCCTCAAGAACAAAAGTAACT | 59.737 | 38.462 | 0.00 | 0.00 | 0.00 | 2.24 |
2094 | 2675 | 6.438763 | CCATGTCCTCAAGAACAAAAGTAAC | 58.561 | 40.000 | 0.00 | 0.00 | 0.00 | 2.50 |
2095 | 2676 | 5.534654 | CCCATGTCCTCAAGAACAAAAGTAA | 59.465 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2096 | 2677 | 5.070001 | CCCATGTCCTCAAGAACAAAAGTA | 58.930 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
2097 | 2678 | 3.891366 | CCCATGTCCTCAAGAACAAAAGT | 59.109 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
2098 | 2679 | 4.144297 | TCCCATGTCCTCAAGAACAAAAG | 58.856 | 43.478 | 0.00 | 0.00 | 0.00 | 2.27 |
2099 | 2680 | 4.141274 | TCTCCCATGTCCTCAAGAACAAAA | 60.141 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
2100 | 2681 | 3.394274 | TCTCCCATGTCCTCAAGAACAAA | 59.606 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
2101 | 2682 | 2.978978 | TCTCCCATGTCCTCAAGAACAA | 59.021 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
2102 | 2683 | 2.619931 | TCTCCCATGTCCTCAAGAACA | 58.380 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
2103 | 2684 | 3.008485 | ACTTCTCCCATGTCCTCAAGAAC | 59.992 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
2104 | 2685 | 3.251484 | ACTTCTCCCATGTCCTCAAGAA | 58.749 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
2105 | 2686 | 2.834549 | GACTTCTCCCATGTCCTCAAGA | 59.165 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2106 | 2687 | 2.836981 | AGACTTCTCCCATGTCCTCAAG | 59.163 | 50.000 | 0.00 | 0.00 | 30.79 | 3.02 |
2107 | 2688 | 2.907892 | AGACTTCTCCCATGTCCTCAA | 58.092 | 47.619 | 0.00 | 0.00 | 30.79 | 3.02 |
2108 | 2689 | 2.568956 | CAAGACTTCTCCCATGTCCTCA | 59.431 | 50.000 | 0.00 | 0.00 | 30.79 | 3.86 |
2109 | 2690 | 2.679349 | GCAAGACTTCTCCCATGTCCTC | 60.679 | 54.545 | 0.00 | 0.00 | 30.79 | 3.71 |
2110 | 2691 | 1.280421 | GCAAGACTTCTCCCATGTCCT | 59.720 | 52.381 | 0.00 | 0.00 | 30.79 | 3.85 |
2111 | 2692 | 1.280421 | AGCAAGACTTCTCCCATGTCC | 59.720 | 52.381 | 0.00 | 0.00 | 30.79 | 4.02 |
2112 | 2693 | 2.777832 | AGCAAGACTTCTCCCATGTC | 57.222 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2113 | 2694 | 4.851639 | AATAGCAAGACTTCTCCCATGT | 57.148 | 40.909 | 0.00 | 0.00 | 0.00 | 3.21 |
2114 | 2695 | 5.923204 | ACTAATAGCAAGACTTCTCCCATG | 58.077 | 41.667 | 0.00 | 0.00 | 0.00 | 3.66 |
2115 | 2696 | 6.841755 | ACTACTAATAGCAAGACTTCTCCCAT | 59.158 | 38.462 | 0.00 | 0.00 | 30.75 | 4.00 |
2116 | 2697 | 6.195700 | ACTACTAATAGCAAGACTTCTCCCA | 58.804 | 40.000 | 0.00 | 0.00 | 30.75 | 4.37 |
2117 | 2698 | 6.321690 | TGACTACTAATAGCAAGACTTCTCCC | 59.678 | 42.308 | 0.00 | 0.00 | 30.75 | 4.30 |
2118 | 2699 | 7.336161 | TGACTACTAATAGCAAGACTTCTCC | 57.664 | 40.000 | 0.00 | 0.00 | 30.75 | 3.71 |
2119 | 2700 | 8.410141 | ACATGACTACTAATAGCAAGACTTCTC | 58.590 | 37.037 | 0.00 | 0.00 | 30.75 | 2.87 |
2120 | 2701 | 8.194104 | CACATGACTACTAATAGCAAGACTTCT | 58.806 | 37.037 | 0.00 | 0.00 | 30.75 | 2.85 |
2121 | 2702 | 8.191446 | TCACATGACTACTAATAGCAAGACTTC | 58.809 | 37.037 | 0.00 | 0.00 | 30.75 | 3.01 |
2122 | 2703 | 8.067751 | TCACATGACTACTAATAGCAAGACTT | 57.932 | 34.615 | 0.00 | 0.00 | 30.75 | 3.01 |
2123 | 2704 | 7.646548 | TCACATGACTACTAATAGCAAGACT | 57.353 | 36.000 | 0.00 | 0.00 | 30.75 | 3.24 |
2124 | 2705 | 8.879342 | ATTCACATGACTACTAATAGCAAGAC | 57.121 | 34.615 | 0.00 | 0.00 | 30.75 | 3.01 |
2125 | 2706 | 9.890629 | AAATTCACATGACTACTAATAGCAAGA | 57.109 | 29.630 | 0.00 | 0.00 | 30.75 | 3.02 |
2126 | 2707 | 9.926751 | CAAATTCACATGACTACTAATAGCAAG | 57.073 | 33.333 | 0.00 | 0.00 | 30.75 | 4.01 |
2127 | 2708 | 8.892723 | CCAAATTCACATGACTACTAATAGCAA | 58.107 | 33.333 | 0.00 | 0.00 | 30.75 | 3.91 |
2128 | 2709 | 8.046708 | ACCAAATTCACATGACTACTAATAGCA | 58.953 | 33.333 | 0.00 | 0.00 | 30.75 | 3.49 |
2129 | 2710 | 8.438676 | ACCAAATTCACATGACTACTAATAGC | 57.561 | 34.615 | 0.00 | 0.00 | 30.75 | 2.97 |
2133 | 2714 | 9.093970 | CGAATACCAAATTCACATGACTACTAA | 57.906 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
2134 | 2715 | 8.255206 | ACGAATACCAAATTCACATGACTACTA | 58.745 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
2135 | 2716 | 7.103641 | ACGAATACCAAATTCACATGACTACT | 58.896 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
2136 | 2717 | 7.303634 | ACGAATACCAAATTCACATGACTAC | 57.696 | 36.000 | 0.00 | 0.00 | 0.00 | 2.73 |
2137 | 2718 | 6.537301 | GGACGAATACCAAATTCACATGACTA | 59.463 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
2138 | 2719 | 5.354234 | GGACGAATACCAAATTCACATGACT | 59.646 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2139 | 2720 | 5.569413 | GGACGAATACCAAATTCACATGAC | 58.431 | 41.667 | 0.00 | 0.00 | 0.00 | 3.06 |
2140 | 2721 | 4.331443 | CGGACGAATACCAAATTCACATGA | 59.669 | 41.667 | 0.00 | 0.00 | 0.00 | 3.07 |
2141 | 2722 | 4.331443 | TCGGACGAATACCAAATTCACATG | 59.669 | 41.667 | 0.00 | 0.00 | 0.00 | 3.21 |
2142 | 2723 | 4.509616 | TCGGACGAATACCAAATTCACAT | 58.490 | 39.130 | 0.00 | 0.00 | 0.00 | 3.21 |
2143 | 2724 | 3.927854 | TCGGACGAATACCAAATTCACA | 58.072 | 40.909 | 0.00 | 0.00 | 0.00 | 3.58 |
2144 | 2725 | 6.780706 | ATATCGGACGAATACCAAATTCAC | 57.219 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
2145 | 2726 | 7.795482 | AAATATCGGACGAATACCAAATTCA | 57.205 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2146 | 2727 | 8.339714 | TCAAAATATCGGACGAATACCAAATTC | 58.660 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
2147 | 2728 | 8.215926 | TCAAAATATCGGACGAATACCAAATT | 57.784 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
2148 | 2729 | 7.795482 | TCAAAATATCGGACGAATACCAAAT | 57.205 | 32.000 | 0.00 | 0.00 | 0.00 | 2.32 |
2149 | 2730 | 7.496263 | TCATCAAAATATCGGACGAATACCAAA | 59.504 | 33.333 | 0.00 | 0.00 | 0.00 | 3.28 |
2150 | 2731 | 6.987404 | TCATCAAAATATCGGACGAATACCAA | 59.013 | 34.615 | 0.00 | 0.00 | 0.00 | 3.67 |
2151 | 2732 | 6.517605 | TCATCAAAATATCGGACGAATACCA | 58.482 | 36.000 | 0.00 | 0.00 | 0.00 | 3.25 |
2152 | 2733 | 6.866770 | TCTCATCAAAATATCGGACGAATACC | 59.133 | 38.462 | 0.00 | 0.00 | 0.00 | 2.73 |
2153 | 2734 | 7.869016 | TCTCATCAAAATATCGGACGAATAC | 57.131 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
2154 | 2735 | 8.088365 | ACATCTCATCAAAATATCGGACGAATA | 58.912 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
2155 | 2736 | 6.931281 | ACATCTCATCAAAATATCGGACGAAT | 59.069 | 34.615 | 0.00 | 0.00 | 0.00 | 3.34 |
2156 | 2737 | 6.280643 | ACATCTCATCAAAATATCGGACGAA | 58.719 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2157 | 2738 | 5.842907 | ACATCTCATCAAAATATCGGACGA | 58.157 | 37.500 | 0.00 | 0.00 | 0.00 | 4.20 |
2158 | 2739 | 7.329471 | ACATACATCTCATCAAAATATCGGACG | 59.671 | 37.037 | 0.00 | 0.00 | 0.00 | 4.79 |
2159 | 2740 | 8.539770 | ACATACATCTCATCAAAATATCGGAC | 57.460 | 34.615 | 0.00 | 0.00 | 0.00 | 4.79 |
2160 | 2741 | 8.992073 | CAACATACATCTCATCAAAATATCGGA | 58.008 | 33.333 | 0.00 | 0.00 | 0.00 | 4.55 |
2161 | 2742 | 8.777413 | ACAACATACATCTCATCAAAATATCGG | 58.223 | 33.333 | 0.00 | 0.00 | 0.00 | 4.18 |
2162 | 2743 | 9.803130 | GACAACATACATCTCATCAAAATATCG | 57.197 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
2166 | 2747 | 9.107177 | GAGAGACAACATACATCTCATCAAAAT | 57.893 | 33.333 | 3.52 | 0.00 | 41.18 | 1.82 |
2167 | 2748 | 7.550551 | GGAGAGACAACATACATCTCATCAAAA | 59.449 | 37.037 | 3.52 | 0.00 | 41.18 | 2.44 |
2168 | 2749 | 7.044181 | GGAGAGACAACATACATCTCATCAAA | 58.956 | 38.462 | 3.52 | 0.00 | 41.18 | 2.69 |
2169 | 2750 | 6.382282 | AGGAGAGACAACATACATCTCATCAA | 59.618 | 38.462 | 3.52 | 0.00 | 41.18 | 2.57 |
2170 | 2751 | 5.896106 | AGGAGAGACAACATACATCTCATCA | 59.104 | 40.000 | 3.52 | 0.00 | 41.18 | 3.07 |
2171 | 2752 | 6.265196 | AGAGGAGAGACAACATACATCTCATC | 59.735 | 42.308 | 6.98 | 6.98 | 44.18 | 2.92 |
2172 | 2753 | 6.135454 | AGAGGAGAGACAACATACATCTCAT | 58.865 | 40.000 | 3.52 | 0.00 | 41.18 | 2.90 |
2173 | 2754 | 5.514169 | AGAGGAGAGACAACATACATCTCA | 58.486 | 41.667 | 3.52 | 0.00 | 41.18 | 3.27 |
2174 | 2755 | 6.770785 | ACTAGAGGAGAGACAACATACATCTC | 59.229 | 42.308 | 0.00 | 0.00 | 39.38 | 2.75 |
2175 | 2756 | 6.545666 | CACTAGAGGAGAGACAACATACATCT | 59.454 | 42.308 | 0.00 | 0.00 | 0.00 | 2.90 |
2176 | 2757 | 6.238897 | CCACTAGAGGAGAGACAACATACATC | 60.239 | 46.154 | 0.00 | 0.00 | 0.00 | 3.06 |
2177 | 2758 | 5.596361 | CCACTAGAGGAGAGACAACATACAT | 59.404 | 44.000 | 0.00 | 0.00 | 0.00 | 2.29 |
2178 | 2759 | 4.950475 | CCACTAGAGGAGAGACAACATACA | 59.050 | 45.833 | 0.00 | 0.00 | 0.00 | 2.29 |
2179 | 2760 | 4.951094 | ACCACTAGAGGAGAGACAACATAC | 59.049 | 45.833 | 13.71 | 0.00 | 0.00 | 2.39 |
2180 | 2761 | 4.950475 | CACCACTAGAGGAGAGACAACATA | 59.050 | 45.833 | 13.71 | 0.00 | 0.00 | 2.29 |
2181 | 2762 | 3.766591 | CACCACTAGAGGAGAGACAACAT | 59.233 | 47.826 | 13.71 | 0.00 | 0.00 | 2.71 |
2182 | 2763 | 3.157881 | CACCACTAGAGGAGAGACAACA | 58.842 | 50.000 | 13.71 | 0.00 | 0.00 | 3.33 |
2183 | 2764 | 3.158676 | ACACCACTAGAGGAGAGACAAC | 58.841 | 50.000 | 13.71 | 0.00 | 0.00 | 3.32 |
2184 | 2765 | 3.527507 | ACACCACTAGAGGAGAGACAA | 57.472 | 47.619 | 13.71 | 0.00 | 0.00 | 3.18 |
2185 | 2766 | 3.527507 | AACACCACTAGAGGAGAGACA | 57.472 | 47.619 | 13.71 | 0.00 | 0.00 | 3.41 |
2186 | 2767 | 4.951094 | ACATAACACCACTAGAGGAGAGAC | 59.049 | 45.833 | 13.71 | 0.00 | 0.00 | 3.36 |
2187 | 2768 | 4.950475 | CACATAACACCACTAGAGGAGAGA | 59.050 | 45.833 | 13.71 | 0.00 | 0.00 | 3.10 |
2188 | 2769 | 4.950475 | TCACATAACACCACTAGAGGAGAG | 59.050 | 45.833 | 13.71 | 5.05 | 0.00 | 3.20 |
2189 | 2770 | 4.930696 | TCACATAACACCACTAGAGGAGA | 58.069 | 43.478 | 13.71 | 0.00 | 0.00 | 3.71 |
2190 | 2771 | 5.411781 | GTTCACATAACACCACTAGAGGAG | 58.588 | 45.833 | 13.71 | 7.68 | 0.00 | 3.69 |
2191 | 2772 | 4.082408 | CGTTCACATAACACCACTAGAGGA | 60.082 | 45.833 | 13.71 | 0.00 | 0.00 | 3.71 |
2192 | 2773 | 4.174009 | CGTTCACATAACACCACTAGAGG | 58.826 | 47.826 | 4.44 | 4.44 | 0.00 | 3.69 |
2193 | 2774 | 4.806330 | ACGTTCACATAACACCACTAGAG | 58.194 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
2194 | 2775 | 4.614306 | CGACGTTCACATAACACCACTAGA | 60.614 | 45.833 | 0.00 | 0.00 | 0.00 | 2.43 |
2195 | 2776 | 3.606777 | CGACGTTCACATAACACCACTAG | 59.393 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
2196 | 2777 | 3.252944 | TCGACGTTCACATAACACCACTA | 59.747 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
2197 | 2778 | 2.034939 | TCGACGTTCACATAACACCACT | 59.965 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
2198 | 2779 | 2.154389 | GTCGACGTTCACATAACACCAC | 59.846 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
2199 | 2780 | 2.034939 | AGTCGACGTTCACATAACACCA | 59.965 | 45.455 | 10.46 | 0.00 | 0.00 | 4.17 |
2200 | 2781 | 2.669364 | AGTCGACGTTCACATAACACC | 58.331 | 47.619 | 10.46 | 0.00 | 0.00 | 4.16 |
2201 | 2782 | 4.221342 | TGTAGTCGACGTTCACATAACAC | 58.779 | 43.478 | 10.46 | 0.00 | 0.00 | 3.32 |
2202 | 2783 | 4.486574 | TGTAGTCGACGTTCACATAACA | 57.513 | 40.909 | 10.46 | 2.35 | 0.00 | 2.41 |
2203 | 2784 | 5.003214 | GTCATGTAGTCGACGTTCACATAAC | 59.997 | 44.000 | 20.13 | 15.54 | 0.00 | 1.89 |
2204 | 2785 | 5.090757 | GTCATGTAGTCGACGTTCACATAA | 58.909 | 41.667 | 20.13 | 9.75 | 0.00 | 1.90 |
2205 | 2786 | 4.154556 | TGTCATGTAGTCGACGTTCACATA | 59.845 | 41.667 | 20.13 | 8.92 | 34.78 | 2.29 |
2206 | 2787 | 3.057806 | TGTCATGTAGTCGACGTTCACAT | 60.058 | 43.478 | 10.46 | 14.61 | 34.78 | 3.21 |
2207 | 2788 | 2.291190 | TGTCATGTAGTCGACGTTCACA | 59.709 | 45.455 | 10.46 | 13.01 | 34.78 | 3.58 |
2208 | 2789 | 2.655474 | GTGTCATGTAGTCGACGTTCAC | 59.345 | 50.000 | 10.46 | 7.71 | 34.78 | 3.18 |
2209 | 2790 | 2.551032 | AGTGTCATGTAGTCGACGTTCA | 59.449 | 45.455 | 10.46 | 10.98 | 34.78 | 3.18 |
2210 | 2791 | 3.198863 | AGTGTCATGTAGTCGACGTTC | 57.801 | 47.619 | 10.46 | 5.38 | 34.78 | 3.95 |
2211 | 2792 | 3.004002 | TGAAGTGTCATGTAGTCGACGTT | 59.996 | 43.478 | 10.46 | 0.00 | 34.78 | 3.99 |
2212 | 2793 | 2.551032 | TGAAGTGTCATGTAGTCGACGT | 59.449 | 45.455 | 10.46 | 1.19 | 34.78 | 4.34 |
2213 | 2794 | 2.909244 | GTGAAGTGTCATGTAGTCGACG | 59.091 | 50.000 | 10.46 | 0.00 | 35.80 | 5.12 |
2214 | 2795 | 3.243336 | GGTGAAGTGTCATGTAGTCGAC | 58.757 | 50.000 | 7.70 | 7.70 | 35.80 | 4.20 |
2215 | 2796 | 2.888414 | TGGTGAAGTGTCATGTAGTCGA | 59.112 | 45.455 | 0.00 | 0.00 | 35.80 | 4.20 |
2216 | 2797 | 3.297830 | TGGTGAAGTGTCATGTAGTCG | 57.702 | 47.619 | 0.00 | 0.00 | 35.80 | 4.18 |
2217 | 2798 | 7.849804 | AATAATGGTGAAGTGTCATGTAGTC | 57.150 | 36.000 | 0.00 | 0.00 | 35.80 | 2.59 |
2218 | 2799 | 7.121168 | CCAAATAATGGTGAAGTGTCATGTAGT | 59.879 | 37.037 | 0.00 | 0.00 | 44.85 | 2.73 |
2219 | 2800 | 7.475015 | CCAAATAATGGTGAAGTGTCATGTAG | 58.525 | 38.462 | 0.00 | 0.00 | 44.85 | 2.74 |
2220 | 2801 | 7.389803 | CCAAATAATGGTGAAGTGTCATGTA | 57.610 | 36.000 | 0.00 | 0.00 | 44.85 | 2.29 |
2221 | 2802 | 6.271488 | CCAAATAATGGTGAAGTGTCATGT | 57.729 | 37.500 | 0.00 | 0.00 | 44.85 | 3.21 |
2235 | 2816 | 4.401925 | CCTTCCTCTAGGCCCAAATAATG | 58.598 | 47.826 | 0.00 | 0.00 | 34.44 | 1.90 |
2236 | 2817 | 4.731313 | CCTTCCTCTAGGCCCAAATAAT | 57.269 | 45.455 | 0.00 | 0.00 | 34.44 | 1.28 |
2246 | 2827 | 0.475906 | CCCCAATGCCTTCCTCTAGG | 59.524 | 60.000 | 0.00 | 0.00 | 38.40 | 3.02 |
2247 | 2828 | 1.419387 | CTCCCCAATGCCTTCCTCTAG | 59.581 | 57.143 | 0.00 | 0.00 | 0.00 | 2.43 |
2248 | 2829 | 1.274416 | ACTCCCCAATGCCTTCCTCTA | 60.274 | 52.381 | 0.00 | 0.00 | 0.00 | 2.43 |
2249 | 2830 | 0.551131 | ACTCCCCAATGCCTTCCTCT | 60.551 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
2250 | 2831 | 1.213296 | TACTCCCCAATGCCTTCCTC | 58.787 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
2251 | 2832 | 1.681229 | TTACTCCCCAATGCCTTCCT | 58.319 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2252 | 2833 | 2.755952 | ATTACTCCCCAATGCCTTCC | 57.244 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2253 | 2834 | 4.793201 | ACTTATTACTCCCCAATGCCTTC | 58.207 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
2254 | 2835 | 4.881157 | ACTTATTACTCCCCAATGCCTT | 57.119 | 40.909 | 0.00 | 0.00 | 0.00 | 4.35 |
2255 | 2836 | 5.224441 | TCTACTTATTACTCCCCAATGCCT | 58.776 | 41.667 | 0.00 | 0.00 | 0.00 | 4.75 |
2256 | 2837 | 5.562298 | TCTACTTATTACTCCCCAATGCC | 57.438 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
2257 | 2838 | 6.769512 | TCATCTACTTATTACTCCCCAATGC | 58.230 | 40.000 | 0.00 | 0.00 | 0.00 | 3.56 |
2258 | 2839 | 7.826252 | CCATCATCTACTTATTACTCCCCAATG | 59.174 | 40.741 | 0.00 | 0.00 | 0.00 | 2.82 |
2259 | 2840 | 7.037297 | CCCATCATCTACTTATTACTCCCCAAT | 60.037 | 40.741 | 0.00 | 0.00 | 0.00 | 3.16 |
2260 | 2841 | 6.272324 | CCCATCATCTACTTATTACTCCCCAA | 59.728 | 42.308 | 0.00 | 0.00 | 0.00 | 4.12 |
2261 | 2842 | 5.785423 | CCCATCATCTACTTATTACTCCCCA | 59.215 | 44.000 | 0.00 | 0.00 | 0.00 | 4.96 |
2262 | 2843 | 5.785940 | ACCCATCATCTACTTATTACTCCCC | 59.214 | 44.000 | 0.00 | 0.00 | 0.00 | 4.81 |
2263 | 2844 | 6.936968 | ACCCATCATCTACTTATTACTCCC | 57.063 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
2264 | 2845 | 6.651225 | GCAACCCATCATCTACTTATTACTCC | 59.349 | 42.308 | 0.00 | 0.00 | 0.00 | 3.85 |
2265 | 2846 | 7.445945 | AGCAACCCATCATCTACTTATTACTC | 58.554 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
2266 | 2847 | 7.380423 | AGCAACCCATCATCTACTTATTACT | 57.620 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2267 | 2848 | 8.585881 | TCTAGCAACCCATCATCTACTTATTAC | 58.414 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
2268 | 2849 | 8.721133 | TCTAGCAACCCATCATCTACTTATTA | 57.279 | 34.615 | 0.00 | 0.00 | 0.00 | 0.98 |
2269 | 2850 | 7.291182 | ACTCTAGCAACCCATCATCTACTTATT | 59.709 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
2270 | 2851 | 6.784969 | ACTCTAGCAACCCATCATCTACTTAT | 59.215 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
2271 | 2852 | 6.040955 | CACTCTAGCAACCCATCATCTACTTA | 59.959 | 42.308 | 0.00 | 0.00 | 0.00 | 2.24 |
2272 | 2853 | 4.965532 | ACTCTAGCAACCCATCATCTACTT | 59.034 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
2273 | 2854 | 4.343526 | CACTCTAGCAACCCATCATCTACT | 59.656 | 45.833 | 0.00 | 0.00 | 0.00 | 2.57 |
2274 | 2855 | 4.342378 | TCACTCTAGCAACCCATCATCTAC | 59.658 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
2275 | 2856 | 4.342378 | GTCACTCTAGCAACCCATCATCTA | 59.658 | 45.833 | 0.00 | 0.00 | 0.00 | 1.98 |
2276 | 2857 | 3.133721 | GTCACTCTAGCAACCCATCATCT | 59.866 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
2277 | 2858 | 3.118629 | TGTCACTCTAGCAACCCATCATC | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 2.92 |
2278 | 2859 | 2.840038 | TGTCACTCTAGCAACCCATCAT | 59.160 | 45.455 | 0.00 | 0.00 | 0.00 | 2.45 |
2279 | 2860 | 2.234661 | CTGTCACTCTAGCAACCCATCA | 59.765 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
2280 | 2861 | 2.497675 | TCTGTCACTCTAGCAACCCATC | 59.502 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2281 | 2862 | 2.540383 | TCTGTCACTCTAGCAACCCAT | 58.460 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
2282 | 2863 | 2.009681 | TCTGTCACTCTAGCAACCCA | 57.990 | 50.000 | 0.00 | 0.00 | 0.00 | 4.51 |
2283 | 2864 | 2.933056 | GCTTCTGTCACTCTAGCAACCC | 60.933 | 54.545 | 0.00 | 0.00 | 0.00 | 4.11 |
2284 | 2865 | 2.028567 | AGCTTCTGTCACTCTAGCAACC | 60.029 | 50.000 | 0.00 | 0.00 | 34.37 | 3.77 |
2285 | 2866 | 3.311486 | AGCTTCTGTCACTCTAGCAAC | 57.689 | 47.619 | 0.00 | 0.00 | 34.37 | 4.17 |
2286 | 2867 | 5.468540 | TTAAGCTTCTGTCACTCTAGCAA | 57.531 | 39.130 | 0.00 | 0.00 | 34.37 | 3.91 |
2287 | 2868 | 5.230942 | GTTTAAGCTTCTGTCACTCTAGCA | 58.769 | 41.667 | 0.00 | 0.00 | 34.37 | 3.49 |
2288 | 2869 | 4.627900 | GGTTTAAGCTTCTGTCACTCTAGC | 59.372 | 45.833 | 0.00 | 0.00 | 0.00 | 3.42 |
2289 | 2870 | 5.046950 | AGGGTTTAAGCTTCTGTCACTCTAG | 60.047 | 44.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2290 | 2871 | 4.838986 | AGGGTTTAAGCTTCTGTCACTCTA | 59.161 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
2291 | 2872 | 3.648545 | AGGGTTTAAGCTTCTGTCACTCT | 59.351 | 43.478 | 0.00 | 0.00 | 0.00 | 3.24 |
2292 | 2873 | 4.009370 | AGGGTTTAAGCTTCTGTCACTC | 57.991 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
2293 | 2874 | 4.593634 | ACTAGGGTTTAAGCTTCTGTCACT | 59.406 | 41.667 | 0.00 | 1.47 | 0.00 | 3.41 |
2294 | 2875 | 4.895961 | ACTAGGGTTTAAGCTTCTGTCAC | 58.104 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
2295 | 2876 | 5.562298 | AACTAGGGTTTAAGCTTCTGTCA | 57.438 | 39.130 | 0.00 | 0.00 | 30.55 | 3.58 |
2296 | 2877 | 7.975750 | CATAAACTAGGGTTTAAGCTTCTGTC | 58.024 | 38.462 | 0.00 | 0.00 | 46.64 | 3.51 |
2297 | 2878 | 7.923414 | CATAAACTAGGGTTTAAGCTTCTGT | 57.077 | 36.000 | 0.00 | 0.00 | 46.64 | 3.41 |
2304 | 2885 | 5.123344 | AGCAACGCATAAACTAGGGTTTAAG | 59.877 | 40.000 | 5.61 | 3.31 | 46.64 | 1.85 |
2305 | 2886 | 5.005094 | AGCAACGCATAAACTAGGGTTTAA | 58.995 | 37.500 | 5.61 | 0.00 | 46.64 | 1.52 |
2307 | 2888 | 3.418047 | AGCAACGCATAAACTAGGGTTT | 58.582 | 40.909 | 0.00 | 0.00 | 46.06 | 3.27 |
2308 | 2889 | 3.067684 | AGCAACGCATAAACTAGGGTT | 57.932 | 42.857 | 0.00 | 0.00 | 40.88 | 4.11 |
2309 | 2890 | 2.781681 | AGCAACGCATAAACTAGGGT | 57.218 | 45.000 | 0.00 | 0.00 | 0.00 | 4.34 |
2310 | 2891 | 2.030457 | CGAAGCAACGCATAAACTAGGG | 59.970 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2311 | 2892 | 2.671396 | ACGAAGCAACGCATAAACTAGG | 59.329 | 45.455 | 0.00 | 0.00 | 36.70 | 3.02 |
2312 | 2893 | 3.991605 | ACGAAGCAACGCATAAACTAG | 57.008 | 42.857 | 0.00 | 0.00 | 36.70 | 2.57 |
2313 | 2894 | 4.327898 | CCTTACGAAGCAACGCATAAACTA | 59.672 | 41.667 | 0.00 | 0.00 | 36.70 | 2.24 |
2314 | 2895 | 3.124636 | CCTTACGAAGCAACGCATAAACT | 59.875 | 43.478 | 0.00 | 0.00 | 36.70 | 2.66 |
2315 | 2896 | 3.413558 | CCTTACGAAGCAACGCATAAAC | 58.586 | 45.455 | 0.00 | 0.00 | 36.70 | 2.01 |
2316 | 2897 | 2.417239 | CCCTTACGAAGCAACGCATAAA | 59.583 | 45.455 | 0.00 | 0.00 | 36.70 | 1.40 |
2317 | 2898 | 2.004017 | CCCTTACGAAGCAACGCATAA | 58.996 | 47.619 | 0.00 | 0.00 | 36.70 | 1.90 |
2318 | 2899 | 1.647346 | CCCTTACGAAGCAACGCATA | 58.353 | 50.000 | 0.00 | 0.00 | 36.70 | 3.14 |
2319 | 2900 | 1.024579 | CCCCTTACGAAGCAACGCAT | 61.025 | 55.000 | 0.00 | 0.00 | 36.70 | 4.73 |
2320 | 2901 | 1.669760 | CCCCTTACGAAGCAACGCA | 60.670 | 57.895 | 0.00 | 0.00 | 36.70 | 5.24 |
2321 | 2902 | 3.035576 | GCCCCTTACGAAGCAACGC | 62.036 | 63.158 | 0.00 | 0.00 | 36.70 | 4.84 |
2322 | 2903 | 1.375523 | AGCCCCTTACGAAGCAACG | 60.376 | 57.895 | 0.00 | 1.28 | 39.31 | 4.10 |
2323 | 2904 | 0.321298 | TCAGCCCCTTACGAAGCAAC | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
2324 | 2905 | 0.618458 | ATCAGCCCCTTACGAAGCAA | 59.382 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2325 | 2906 | 0.618458 | AATCAGCCCCTTACGAAGCA | 59.382 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2326 | 2907 | 1.401905 | CAAATCAGCCCCTTACGAAGC | 59.598 | 52.381 | 0.00 | 0.00 | 0.00 | 3.86 |
2327 | 2908 | 2.017049 | CCAAATCAGCCCCTTACGAAG | 58.983 | 52.381 | 0.00 | 0.00 | 0.00 | 3.79 |
2328 | 2909 | 1.631388 | TCCAAATCAGCCCCTTACGAA | 59.369 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
2329 | 2910 | 1.281419 | TCCAAATCAGCCCCTTACGA | 58.719 | 50.000 | 0.00 | 0.00 | 0.00 | 3.43 |
2330 | 2911 | 2.222027 | GATCCAAATCAGCCCCTTACG | 58.778 | 52.381 | 0.00 | 0.00 | 31.76 | 3.18 |
2331 | 2912 | 2.091885 | TGGATCCAAATCAGCCCCTTAC | 60.092 | 50.000 | 13.46 | 0.00 | 33.21 | 2.34 |
2332 | 2913 | 2.213310 | TGGATCCAAATCAGCCCCTTA | 58.787 | 47.619 | 13.46 | 0.00 | 33.21 | 2.69 |
2333 | 2914 | 1.009997 | TGGATCCAAATCAGCCCCTT | 58.990 | 50.000 | 13.46 | 0.00 | 33.21 | 3.95 |
2334 | 2915 | 1.238615 | ATGGATCCAAATCAGCCCCT | 58.761 | 50.000 | 20.67 | 0.00 | 33.21 | 4.79 |
2335 | 2916 | 3.856774 | ATGGATCCAAATCAGCCCC | 57.143 | 52.632 | 20.67 | 0.00 | 33.21 | 5.80 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.