Multiple sequence alignment - TraesCS3A01G197000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G197000 chr3A 100.000 6615 0 0 1 6615 303835886 303829272 0.000000e+00 12216.0
1 TraesCS3A01G197000 chr3A 100.000 182 0 0 2622 2803 677159601 677159782 2.960000e-88 337.0
2 TraesCS3A01G197000 chr3A 77.907 258 45 5 1 246 552272100 552271843 4.130000e-32 150.0
3 TraesCS3A01G197000 chr3A 79.532 171 33 2 75 244 436270123 436269954 3.240000e-23 121.0
4 TraesCS3A01G197000 chr3A 80.142 141 26 2 86 225 95563640 95563501 3.260000e-18 104.0
5 TraesCS3A01G197000 chr3A 88.235 51 2 1 5901 5947 418770836 418770886 2.580000e-04 58.4
6 TraesCS3A01G197000 chr3D 92.930 2645 126 25 2 2625 229480461 229477857 0.000000e+00 3792.0
7 TraesCS3A01G197000 chr3D 97.389 1302 32 2 2801 4101 229477841 229476541 0.000000e+00 2215.0
8 TraesCS3A01G197000 chr3D 93.469 1378 38 6 5049 6419 229475838 229474506 0.000000e+00 1999.0
9 TraesCS3A01G197000 chr3D 97.740 708 12 3 4183 4887 229476543 229475837 0.000000e+00 1216.0
10 TraesCS3A01G197000 chr3D 93.714 175 9 2 4877 5050 310191404 310191231 1.830000e-65 261.0
11 TraesCS3A01G197000 chr3D 80.576 278 45 6 1 276 323245496 323245226 8.700000e-49 206.0
12 TraesCS3A01G197000 chr3D 94.231 52 3 0 5872 5923 520319681 520319732 5.500000e-11 80.5
13 TraesCS3A01G197000 chr3B 95.939 2093 60 11 2801 4887 336933735 336931662 0.000000e+00 3371.0
14 TraesCS3A01G197000 chr3B 96.959 1184 29 4 770 1953 336935725 336934549 0.000000e+00 1980.0
15 TraesCS3A01G197000 chr3B 94.234 1110 37 7 5049 6155 336931663 336930578 0.000000e+00 1670.0
16 TraesCS3A01G197000 chr3B 94.658 599 29 2 2027 2625 336934346 336933751 0.000000e+00 926.0
17 TraesCS3A01G197000 chr3B 98.919 185 1 1 2629 2812 738697544 738697728 4.950000e-86 329.0
18 TraesCS3A01G197000 chr3B 97.423 194 1 1 2614 2803 195101585 195101778 1.780000e-85 327.0
19 TraesCS3A01G197000 chr3B 92.179 179 14 0 6216 6394 336930106 336929928 3.060000e-63 254.0
20 TraesCS3A01G197000 chr3B 85.897 78 10 1 7 84 50155242 50155166 1.530000e-11 82.4
21 TraesCS3A01G197000 chr6B 99.451 182 1 0 2629 2810 706892581 706892400 1.370000e-86 331.0
22 TraesCS3A01G197000 chr6B 98.913 184 2 0 2629 2812 338654732 338654915 4.950000e-86 329.0
23 TraesCS3A01G197000 chr6B 78.774 212 44 1 7 218 509257124 509256914 2.490000e-29 141.0
24 TraesCS3A01G197000 chr6B 92.727 55 4 0 5877 5931 466985317 466985371 5.500000e-11 80.5
25 TraesCS3A01G197000 chr6A 96.059 203 2 3 2608 2805 1437274 1437475 6.400000e-85 326.0
26 TraesCS3A01G197000 chr4B 98.387 186 2 1 2616 2800 413735113 413734928 6.400000e-85 326.0
27 TraesCS3A01G197000 chr2B 96.482 199 3 3 2608 2803 72669296 72669493 6.400000e-85 326.0
28 TraesCS3A01G197000 chr2B 96.939 196 2 1 2611 2802 380067761 380067956 6.400000e-85 326.0
29 TraesCS3A01G197000 chr2B 95.294 170 7 1 4881 5050 751258463 751258295 1.090000e-67 268.0
30 TraesCS3A01G197000 chr2B 93.258 178 11 1 4874 5051 41180841 41181017 1.830000e-65 261.0
31 TraesCS3A01G197000 chr2B 89.831 59 6 0 435 493 631543261 631543203 7.110000e-10 76.8
32 TraesCS3A01G197000 chr6D 95.833 168 7 0 4886 5053 392278577 392278744 8.450000e-69 272.0
33 TraesCS3A01G197000 chr6D 94.186 172 9 1 4880 5050 260024503 260024674 1.830000e-65 261.0
34 TraesCS3A01G197000 chr6D 90.155 193 18 1 6418 6610 112354677 112354486 3.960000e-62 250.0
35 TraesCS3A01G197000 chr6D 76.707 249 46 6 30 276 456688152 456688390 1.940000e-25 128.0
36 TraesCS3A01G197000 chr1D 94.220 173 10 0 4881 5053 365727160 365727332 1.410000e-66 265.0
37 TraesCS3A01G197000 chr1D 95.181 166 8 0 4885 5050 465958551 465958716 5.090000e-66 263.0
38 TraesCS3A01G197000 chr1D 94.231 52 3 0 5872 5923 340545568 340545619 5.500000e-11 80.5
39 TraesCS3A01G197000 chr1B 94.186 172 9 1 4880 5051 639429459 639429629 1.830000e-65 261.0
40 TraesCS3A01G197000 chr1B 91.053 190 15 2 6422 6610 445677989 445678177 8.510000e-64 255.0
41 TraesCS3A01G197000 chr1B 90.526 190 16 2 6422 6610 445673105 445673293 3.960000e-62 250.0
42 TraesCS3A01G197000 chr1B 78.138 247 49 1 35 276 572672826 572673072 1.150000e-32 152.0
43 TraesCS3A01G197000 chr5D 91.803 183 14 1 4871 5053 330703147 330702966 3.060000e-63 254.0
44 TraesCS3A01G197000 chr5D 89.474 57 5 1 435 491 119252423 119252368 3.310000e-08 71.3
45 TraesCS3A01G197000 chrUn 90.957 188 15 2 6422 6608 27187197 27187011 1.100000e-62 252.0
46 TraesCS3A01G197000 chrUn 90.476 189 18 0 6422 6610 33185560 33185372 3.960000e-62 250.0
47 TraesCS3A01G197000 chr7D 89.947 189 19 0 6422 6610 109531930 109532118 1.840000e-60 244.0
48 TraesCS3A01G197000 chr7D 89.947 189 18 1 6422 6610 80487849 80487662 6.630000e-60 243.0
49 TraesCS3A01G197000 chr7D 89.119 193 20 1 6418 6610 383942046 383941855 8.570000e-59 239.0
50 TraesCS3A01G197000 chr7D 86.603 209 28 0 2 210 71310413 71310621 1.430000e-56 231.0
51 TraesCS3A01G197000 chr1A 89.947 189 18 1 6422 6610 475455665 475455478 6.630000e-60 243.0
52 TraesCS3A01G197000 chr1A 78.341 217 43 2 3 219 29197445 29197233 3.220000e-28 137.0
53 TraesCS3A01G197000 chr1A 84.146 82 9 1 5873 5950 550334874 550334793 7.110000e-10 76.8
54 TraesCS3A01G197000 chr7A 76.457 429 58 27 349 748 94702532 94702118 6.770000e-45 193.0
55 TraesCS3A01G197000 chr5B 83.486 109 11 4 403 504 503082048 503082156 1.960000e-15 95.3
56 TraesCS3A01G197000 chr5B 85.000 80 8 2 5872 5947 137697805 137697726 1.980000e-10 78.7
57 TraesCS3A01G197000 chr5B 93.478 46 3 0 446 491 131713767 131713722 1.190000e-07 69.4
58 TraesCS3A01G197000 chr2A 84.524 84 12 1 1 84 726598485 726598403 1.530000e-11 82.4
59 TraesCS3A01G197000 chr2A 84.416 77 11 1 8 84 104714466 104714541 2.560000e-09 75.0
60 TraesCS3A01G197000 chr5A 94.231 52 3 0 5872 5923 90044745 90044694 5.500000e-11 80.5
61 TraesCS3A01G197000 chr7B 86.667 75 5 3 5872 5942 60423430 60423357 1.980000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G197000 chr3A 303829272 303835886 6614 True 12216.0 12216 100.0000 1 6615 1 chr3A.!!$R2 6614
1 TraesCS3A01G197000 chr3D 229474506 229480461 5955 True 2305.5 3792 95.3820 2 6419 4 chr3D.!!$R3 6417
2 TraesCS3A01G197000 chr3B 336929928 336935725 5797 True 1640.2 3371 94.7938 770 6394 5 chr3B.!!$R2 5624

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
229 241 0.036010 CACTCAGGCTCAACCCGATT 60.036 55.000 0.00 0.0 40.58 3.34 F
399 412 0.602905 ACCTGGTAGCACGCAAGAAC 60.603 55.000 0.00 0.0 43.62 3.01 F
401 414 0.666274 CTGGTAGCACGCAAGAACGA 60.666 55.000 0.00 0.0 43.62 3.85 F
425 438 1.002624 CAAGGCCTGGGCTAAACGA 60.003 57.895 24.25 0.0 37.50 3.85 F
711 728 1.091537 ATTAAACGTGCCACGATGGG 58.908 50.000 25.94 0.0 46.05 4.00 F
2685 2829 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.0 41.02 2.77 F
2770 2914 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.00 0.0 44.78 4.85 F
2783 2927 0.111253 AAGGCAGCAGCTTTACCACT 59.889 50.000 0.00 0.0 38.40 4.00 F
4136 4364 0.166814 GCATCGTCCTGCACTGTTTC 59.833 55.000 3.18 0.0 41.87 2.78 F
4182 4410 0.113580 TTCCCAACTAAACCTGCCCC 59.886 55.000 0.00 0.0 0.00 5.80 F
4944 5179 3.378911 TCAACAAGTGACTACATGCGA 57.621 42.857 0.00 0.0 0.00 5.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1748 1765 2.094258 CGCATACACACATCACAGAACC 59.906 50.0 0.0 0.0 0.00 3.62 R
2365 2509 6.849588 TCCTACTCTAAAAACGGAAAACAC 57.150 37.5 0.0 0.0 0.00 3.32 R
2436 2580 5.688823 TGCAGATGATTACGTCTTGTTTTG 58.311 37.5 0.0 0.0 39.99 2.44 R
2447 2591 5.827797 TCATAAACCCCTTGCAGATGATTAC 59.172 40.0 0.0 0.0 0.00 1.89 R
2694 2838 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.0 0.0 0.0 37.28 3.67 R
4165 4393 0.041090 ATGGGGCAGGTTTAGTTGGG 59.959 55.0 0.0 0.0 0.00 4.12 R
4173 4401 0.106519 GCATAGTGATGGGGCAGGTT 60.107 55.0 0.0 0.0 33.26 3.50 R
4175 4403 0.111832 ATGCATAGTGATGGGGCAGG 59.888 55.0 0.0 0.0 37.96 4.85 R
5032 5267 0.115745 ACTACTCCCTCCGTTCCCAA 59.884 55.0 0.0 0.0 0.00 4.12 R
5033 5268 0.115745 AACTACTCCCTCCGTTCCCA 59.884 55.0 0.0 0.0 0.00 4.37 R
6584 7263 0.032130 ACAAGCACGAGACGACACAT 59.968 50.0 0.0 0.0 0.00 3.21 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
97 109 2.951458 CCCGAAAAAGCCCGACAC 59.049 61.111 0.00 0.00 0.00 3.67
131 143 1.493022 TGACCCGGCTATGGCTAAAAT 59.507 47.619 0.00 0.00 38.73 1.82
133 145 2.956333 GACCCGGCTATGGCTAAAATTT 59.044 45.455 0.00 0.00 38.73 1.82
146 158 5.211454 GGCTAAAATTTTGTTTTGCGCAAT 58.789 33.333 25.64 7.25 39.26 3.56
195 207 1.432270 CTCGATTTTCAGGCCCGAGC 61.432 60.000 11.51 0.00 39.88 5.03
222 234 3.239464 TGGCACACTCAGGCTCAA 58.761 55.556 0.00 0.00 0.00 3.02
227 239 1.837051 ACACTCAGGCTCAACCCGA 60.837 57.895 0.00 0.00 40.58 5.14
229 241 0.036010 CACTCAGGCTCAACCCGATT 60.036 55.000 0.00 0.00 40.58 3.34
231 243 0.807667 CTCAGGCTCAACCCGATTCG 60.808 60.000 0.00 0.00 40.58 3.34
232 244 1.218047 CAGGCTCAACCCGATTCGA 59.782 57.895 7.83 0.00 40.58 3.71
245 257 1.792949 CGATTCGAGATTTTAGGGCCG 59.207 52.381 0.00 0.00 0.00 6.13
249 261 0.874607 CGAGATTTTAGGGCCGTCCG 60.875 60.000 0.00 0.00 41.52 4.79
252 264 0.812811 GATTTTAGGGCCGTCCGGAC 60.813 60.000 25.28 25.28 44.33 4.79
292 304 2.949177 ATAGCAATAATGTCGCCCCA 57.051 45.000 0.00 0.00 0.00 4.96
293 305 2.254546 TAGCAATAATGTCGCCCCAG 57.745 50.000 0.00 0.00 0.00 4.45
318 331 1.648467 GCTTCAAGCCGCGAAATCCT 61.648 55.000 8.23 0.00 34.48 3.24
347 360 1.353394 CCCTCCCCATCCCAACCTAC 61.353 65.000 0.00 0.00 0.00 3.18
354 367 0.749454 CATCCCAACCTACAGCTGGC 60.749 60.000 19.93 0.00 0.00 4.85
374 387 1.680555 CCAAATGGGCCGTGCTAACTA 60.681 52.381 0.00 0.00 0.00 2.24
399 412 0.602905 ACCTGGTAGCACGCAAGAAC 60.603 55.000 0.00 0.00 43.62 3.01
401 414 0.666274 CTGGTAGCACGCAAGAACGA 60.666 55.000 0.00 0.00 43.62 3.85
406 419 2.544359 CACGCAAGAACGACACGG 59.456 61.111 0.00 0.00 43.62 4.94
425 438 1.002624 CAAGGCCTGGGCTAAACGA 60.003 57.895 24.25 0.00 37.50 3.85
427 440 1.489560 AAGGCCTGGGCTAAACGAGT 61.490 55.000 24.25 2.49 37.50 4.18
509 522 5.864986 CGGCATGACCCGTTTATTATTATC 58.135 41.667 0.00 0.00 43.24 1.75
608 623 5.806654 AAAAGTGACCCAATGTGCTAAAT 57.193 34.783 0.00 0.00 0.00 1.40
616 631 2.029200 CCAATGTGCTAAATGTGCCACA 60.029 45.455 0.00 0.00 0.00 4.17
633 648 3.340034 CCACAGGCCGTTCTGTTTAATA 58.660 45.455 0.00 0.00 44.74 0.98
646 661 4.095782 TCTGTTTAATAAATCAGGCCGTGC 59.904 41.667 0.00 0.00 0.00 5.34
658 673 2.046892 CCGTGCCTGGACCAAGAG 60.047 66.667 0.00 0.00 0.00 2.85
659 674 2.743928 CGTGCCTGGACCAAGAGC 60.744 66.667 0.00 0.00 0.00 4.09
660 675 2.431683 GTGCCTGGACCAAGAGCA 59.568 61.111 8.96 8.96 0.00 4.26
661 676 1.673665 GTGCCTGGACCAAGAGCAG 60.674 63.158 12.51 0.00 33.37 4.24
662 677 2.149383 TGCCTGGACCAAGAGCAGT 61.149 57.895 8.96 0.00 0.00 4.40
663 678 1.673665 GCCTGGACCAAGAGCAGTG 60.674 63.158 0.00 0.00 0.00 3.66
664 679 1.673665 CCTGGACCAAGAGCAGTGC 60.674 63.158 7.13 7.13 0.00 4.40
665 680 1.374190 CTGGACCAAGAGCAGTGCT 59.626 57.895 19.86 19.86 43.88 4.40
710 727 4.092816 GTTTATTAAACGTGCCACGATGG 58.907 43.478 25.94 0.00 46.05 3.51
711 728 1.091537 ATTAAACGTGCCACGATGGG 58.908 50.000 25.94 0.00 46.05 4.00
738 755 2.125310 CACGATTAGCACGGGCCA 60.125 61.111 5.73 0.00 42.56 5.36
779 796 4.143301 GCCCCAACCCCATCCCTC 62.143 72.222 0.00 0.00 0.00 4.30
812 829 2.203549 CTCCAGTCCTCCTTTGGCCC 62.204 65.000 0.00 0.00 31.94 5.80
883 900 4.019858 CTCCCTTTCCATTTCCTTCCTTC 58.980 47.826 0.00 0.00 0.00 3.46
884 901 3.099905 CCCTTTCCATTTCCTTCCTTCC 58.900 50.000 0.00 0.00 0.00 3.46
885 902 3.245766 CCCTTTCCATTTCCTTCCTTCCT 60.246 47.826 0.00 0.00 0.00 3.36
886 903 4.420206 CCTTTCCATTTCCTTCCTTCCTT 58.580 43.478 0.00 0.00 0.00 3.36
890 907 3.397618 TCCATTTCCTTCCTTCCTTGTCA 59.602 43.478 0.00 0.00 0.00 3.58
1551 1568 1.135721 TCATCAGTCCTGCAGTCATCG 59.864 52.381 13.81 0.00 0.00 3.84
1588 1605 7.254522 GGTTGTTCGTGTTTCTTCTAATACACA 60.255 37.037 0.00 0.00 40.59 3.72
1732 1749 8.889975 CATATTAGTAGTACGTACAAAGAAGCG 58.110 37.037 26.55 5.29 33.55 4.68
1748 1765 3.624861 AGAAGCGCACTTAATCTCCAATG 59.375 43.478 11.47 0.00 35.82 2.82
1812 1829 6.590068 CCATAAGATCACTGTCCTGATTTCT 58.410 40.000 0.00 0.00 30.62 2.52
1889 1906 4.042062 CCTATGGGTGCTTAGGATGATTGA 59.958 45.833 0.00 0.00 37.74 2.57
2067 2211 5.645497 AGTATGAATCCAGAACTTCAAGTGC 59.355 40.000 0.00 0.00 35.20 4.40
2305 2449 2.943199 GCTGCTTATGCACCTCTTCCTT 60.943 50.000 0.00 0.00 45.31 3.36
2359 2503 8.242053 GTCATCAGATTCCATATAGCCATTTTG 58.758 37.037 0.00 0.00 0.00 2.44
2392 2536 8.587608 TGTTTTCCGTTTTTAGAGTAGGATCTA 58.412 33.333 0.00 0.00 0.00 1.98
2436 2580 3.341823 ACAATTCACCTCTGCTCATGAC 58.658 45.455 0.00 0.00 0.00 3.06
2437 2581 3.244665 ACAATTCACCTCTGCTCATGACA 60.245 43.478 0.00 0.00 0.00 3.58
2447 2591 3.248363 TCTGCTCATGACAAAACAAGACG 59.752 43.478 0.00 0.00 0.00 4.18
2517 2661 5.122396 GTGGAGGTGTTGTCTAAAGCATAAG 59.878 44.000 0.00 0.00 0.00 1.73
2645 2789 2.292828 AAAACCTGGTGCATGTAGCT 57.707 45.000 14.15 0.00 45.94 3.32
2646 2790 1.826385 AAACCTGGTGCATGTAGCTC 58.174 50.000 14.15 0.00 45.94 4.09
2652 2796 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
2653 2797 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
2654 2798 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
2655 2799 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
2658 2802 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
2670 2814 4.785453 GCGCAGGGTCCAGGGAAG 62.785 72.222 0.30 0.00 0.00 3.46
2671 2815 4.101448 CGCAGGGTCCAGGGAAGG 62.101 72.222 0.00 0.00 0.00 3.46
2672 2816 3.732849 GCAGGGTCCAGGGAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
2673 2817 2.204151 CAGGGTCCAGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
2674 2818 2.125225 AGGGTCCAGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
2675 2819 3.015753 GGGTCCAGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
2676 2820 3.400054 GGTCCAGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
2677 2821 2.284405 GTCCAGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
2678 2822 2.284405 TCCAGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
2679 2823 3.400054 CCAGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
2680 2824 2.606519 CAGGGAAGGGTCCGACCA 60.607 66.667 19.43 0.00 46.04 4.02
2681 2825 2.606826 AGGGAAGGGTCCGACCAC 60.607 66.667 19.43 8.70 46.04 4.16
2682 2826 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
2683 2827 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
2684 2828 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
2685 2829 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
2686 2830 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
2687 2831 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
2688 2832 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
2698 2842 4.996788 ACCACTTTGGGTCTATAGTACG 57.003 45.455 0.00 0.00 43.37 3.67
2699 2843 3.131755 ACCACTTTGGGTCTATAGTACGC 59.868 47.826 0.00 6.13 43.37 4.42
2700 2844 3.131577 CCACTTTGGGTCTATAGTACGCA 59.868 47.826 13.98 13.98 37.94 5.24
2701 2845 4.360563 CACTTTGGGTCTATAGTACGCAG 58.639 47.826 16.00 11.29 40.36 5.18
2702 2846 3.181478 ACTTTGGGTCTATAGTACGCAGC 60.181 47.826 16.00 2.07 40.36 5.25
2703 2847 1.325355 TGGGTCTATAGTACGCAGCC 58.675 55.000 13.98 8.23 35.18 4.85
2704 2848 1.133575 TGGGTCTATAGTACGCAGCCT 60.134 52.381 13.98 0.00 35.18 4.58
2705 2849 1.962100 GGGTCTATAGTACGCAGCCTT 59.038 52.381 0.00 0.00 0.00 4.35
2706 2850 2.364647 GGGTCTATAGTACGCAGCCTTT 59.635 50.000 0.00 0.00 0.00 3.11
2707 2851 3.552478 GGGTCTATAGTACGCAGCCTTTC 60.552 52.174 0.00 0.00 0.00 2.62
2708 2852 3.552478 GGTCTATAGTACGCAGCCTTTCC 60.552 52.174 0.00 0.00 0.00 3.13
2709 2853 2.626743 TCTATAGTACGCAGCCTTTCCC 59.373 50.000 0.00 0.00 0.00 3.97
2710 2854 1.497161 ATAGTACGCAGCCTTTCCCT 58.503 50.000 0.00 0.00 0.00 4.20
2711 2855 2.148446 TAGTACGCAGCCTTTCCCTA 57.852 50.000 0.00 0.00 0.00 3.53
2712 2856 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.00 0.00 3.18
2713 2857 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
2714 2858 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
2715 2859 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
2716 2860 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
2717 2861 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
2718 2862 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
2719 2863 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
2720 2864 3.690460 CAGCCTTTCCCTACATTTCTGT 58.310 45.455 0.00 0.00 39.49 3.41
2721 2865 4.843728 CAGCCTTTCCCTACATTTCTGTA 58.156 43.478 0.00 0.00 36.79 2.74
2722 2866 5.253330 CAGCCTTTCCCTACATTTCTGTAA 58.747 41.667 0.00 0.00 37.41 2.41
2723 2867 5.355350 CAGCCTTTCCCTACATTTCTGTAAG 59.645 44.000 0.00 0.00 37.41 2.34
2724 2868 5.250774 AGCCTTTCCCTACATTTCTGTAAGA 59.749 40.000 0.00 0.00 44.68 2.10
2736 2880 3.685139 TCTGTAAGAGGCTGTTTCCAG 57.315 47.619 0.90 9.48 38.67 3.86
2737 2881 2.303022 TCTGTAAGAGGCTGTTTCCAGG 59.697 50.000 17.71 5.83 38.67 4.45
2738 2882 2.303022 CTGTAAGAGGCTGTTTCCAGGA 59.697 50.000 0.90 0.00 35.89 3.86
2739 2883 2.038557 TGTAAGAGGCTGTTTCCAGGAC 59.961 50.000 0.90 0.00 39.22 3.85
2740 2884 1.439543 AAGAGGCTGTTTCCAGGACT 58.560 50.000 0.00 0.00 39.22 3.85
2741 2885 1.439543 AGAGGCTGTTTCCAGGACTT 58.560 50.000 0.00 0.00 39.22 3.01
2742 2886 1.072965 AGAGGCTGTTTCCAGGACTTG 59.927 52.381 0.00 0.00 39.22 3.16
2743 2887 1.072331 GAGGCTGTTTCCAGGACTTGA 59.928 52.381 0.00 0.00 39.22 3.02
2744 2888 1.494721 AGGCTGTTTCCAGGACTTGAA 59.505 47.619 0.00 0.00 39.22 2.69
2745 2889 1.609072 GGCTGTTTCCAGGACTTGAAC 59.391 52.381 0.00 0.00 39.22 3.18
2746 2890 1.609072 GCTGTTTCCAGGACTTGAACC 59.391 52.381 0.00 0.00 39.22 3.62
2747 2891 2.230660 CTGTTTCCAGGACTTGAACCC 58.769 52.381 0.00 0.00 34.90 4.11
2748 2892 1.566703 TGTTTCCAGGACTTGAACCCA 59.433 47.619 0.00 0.00 0.00 4.51
2749 2893 2.176798 TGTTTCCAGGACTTGAACCCAT 59.823 45.455 0.00 0.00 0.00 4.00
2750 2894 2.558359 GTTTCCAGGACTTGAACCCATG 59.442 50.000 0.00 0.00 0.00 3.66
2751 2895 1.741028 TCCAGGACTTGAACCCATGA 58.259 50.000 0.00 0.00 0.00 3.07
2752 2896 1.351017 TCCAGGACTTGAACCCATGAC 59.649 52.381 0.00 0.00 0.00 3.06
2753 2897 1.614317 CCAGGACTTGAACCCATGACC 60.614 57.143 0.00 0.00 34.29 4.02
2754 2898 1.352352 CAGGACTTGAACCCATGACCT 59.648 52.381 0.00 0.00 40.96 3.85
2755 2899 1.630878 AGGACTTGAACCCATGACCTC 59.369 52.381 0.00 0.00 37.82 3.85
2756 2900 1.351017 GGACTTGAACCCATGACCTCA 59.649 52.381 0.00 0.00 32.45 3.86
2757 2901 2.025887 GGACTTGAACCCATGACCTCAT 60.026 50.000 0.00 0.00 36.96 2.90
2769 2913 2.154139 ACCTCATGGTCACAAGGCA 58.846 52.632 0.00 0.00 44.78 4.75
2770 2914 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.00 0.00 44.78 4.85
2771 2915 1.310933 CCTCATGGTCACAAGGCAGC 61.311 60.000 0.00 0.00 0.00 5.25
2772 2916 0.607217 CTCATGGTCACAAGGCAGCA 60.607 55.000 0.00 0.00 0.00 4.41
2773 2917 0.607217 TCATGGTCACAAGGCAGCAG 60.607 55.000 0.00 0.00 0.00 4.24
2774 2918 1.975407 ATGGTCACAAGGCAGCAGC 60.975 57.895 0.00 0.00 41.10 5.25
2775 2919 2.282040 GGTCACAAGGCAGCAGCT 60.282 61.111 0.00 0.00 41.70 4.24
2776 2920 1.900498 GGTCACAAGGCAGCAGCTT 60.900 57.895 0.00 0.00 41.70 3.74
2777 2921 1.458639 GGTCACAAGGCAGCAGCTTT 61.459 55.000 0.00 0.00 41.17 3.51
2778 2922 1.238439 GTCACAAGGCAGCAGCTTTA 58.762 50.000 0.00 0.00 38.07 1.85
2779 2923 1.068954 GTCACAAGGCAGCAGCTTTAC 60.069 52.381 0.00 0.00 38.07 2.01
2780 2924 0.242017 CACAAGGCAGCAGCTTTACC 59.758 55.000 0.00 0.00 38.07 2.85
2781 2925 0.178992 ACAAGGCAGCAGCTTTACCA 60.179 50.000 0.00 0.00 38.07 3.25
2782 2926 0.242017 CAAGGCAGCAGCTTTACCAC 59.758 55.000 0.00 0.00 38.07 4.16
2783 2927 0.111253 AAGGCAGCAGCTTTACCACT 59.889 50.000 0.00 0.00 38.40 4.00
2784 2928 0.607489 AGGCAGCAGCTTTACCACTG 60.607 55.000 0.00 0.00 41.70 3.66
2788 2932 2.870372 CAGCTTTACCACTGCGCC 59.130 61.111 4.18 0.00 0.00 6.53
2789 2933 1.965930 CAGCTTTACCACTGCGCCA 60.966 57.895 4.18 0.00 0.00 5.69
2790 2934 1.228124 AGCTTTACCACTGCGCCAA 60.228 52.632 4.18 0.00 0.00 4.52
2791 2935 1.210155 GCTTTACCACTGCGCCAAG 59.790 57.895 4.18 0.00 0.00 3.61
2792 2936 1.875963 CTTTACCACTGCGCCAAGG 59.124 57.895 4.18 6.21 0.00 3.61
2793 2937 2.200170 CTTTACCACTGCGCCAAGGC 62.200 60.000 4.18 0.00 37.85 4.35
2794 2938 2.690653 TTTACCACTGCGCCAAGGCT 62.691 55.000 4.18 0.00 39.32 4.58
2795 2939 3.605749 TACCACTGCGCCAAGGCTC 62.606 63.158 4.18 1.20 39.32 4.70
2867 3012 5.125100 ACCAATGTACAATGCAGAACTTG 57.875 39.130 5.33 0.00 0.00 3.16
2869 3014 5.477984 ACCAATGTACAATGCAGAACTTGAT 59.522 36.000 5.33 0.00 0.00 2.57
2989 3134 1.666553 CGCTGGCCAAACGACACTA 60.667 57.895 20.34 0.00 0.00 2.74
3167 3312 2.675348 GTGGTAGCAGCAGAAGTTCATC 59.325 50.000 5.50 0.00 0.00 2.92
3191 3336 3.429410 GCTCACAACCCAAATCATAAGGC 60.429 47.826 0.00 0.00 0.00 4.35
3242 3388 3.370061 CACGTTCTTCTTTTATCGTCCCC 59.630 47.826 0.00 0.00 0.00 4.81
3367 3513 8.830741 CCTATGGAGTTCTCTTCCCATATTTAT 58.169 37.037 0.00 0.00 39.91 1.40
3590 3736 4.576053 TGGTAGCAGTGATTATGAACATGC 59.424 41.667 0.00 0.00 0.00 4.06
3810 3956 4.307032 TCTAGCCTTTCAGCCAGATTTT 57.693 40.909 0.00 0.00 0.00 1.82
3851 3997 2.346803 AGTTGTGATTTATCAGCGCGT 58.653 42.857 8.43 0.00 37.51 6.01
3875 4021 1.221414 GGATGAGCATCGCTTGGTAC 58.779 55.000 4.54 0.00 39.88 3.34
3876 4022 1.473257 GGATGAGCATCGCTTGGTACA 60.473 52.381 4.54 0.00 39.88 2.90
4099 4327 5.304357 TCGGATCATAGGTTGAATTAGCTCA 59.696 40.000 0.00 0.00 38.03 4.26
4100 4328 6.014242 TCGGATCATAGGTTGAATTAGCTCAT 60.014 38.462 0.00 0.00 38.03 2.90
4101 4329 7.178451 TCGGATCATAGGTTGAATTAGCTCATA 59.822 37.037 0.00 0.00 38.03 2.15
4102 4330 7.819415 CGGATCATAGGTTGAATTAGCTCATAA 59.181 37.037 0.00 0.00 38.03 1.90
4103 4331 9.678260 GGATCATAGGTTGAATTAGCTCATAAT 57.322 33.333 0.00 0.00 38.03 1.28
4105 4333 8.327941 TCATAGGTTGAATTAGCTCATAATGC 57.672 34.615 0.00 0.00 34.21 3.56
4106 4334 8.159447 TCATAGGTTGAATTAGCTCATAATGCT 58.841 33.333 0.00 0.00 43.79 3.79
4107 4335 8.790718 CATAGGTTGAATTAGCTCATAATGCTT 58.209 33.333 0.00 0.00 41.46 3.91
4108 4336 7.035840 AGGTTGAATTAGCTCATAATGCTTG 57.964 36.000 0.00 0.00 41.46 4.01
4109 4337 5.689068 GGTTGAATTAGCTCATAATGCTTGC 59.311 40.000 0.00 0.00 41.46 4.01
4110 4338 6.460676 GGTTGAATTAGCTCATAATGCTTGCT 60.461 38.462 0.00 0.00 41.46 3.91
4111 4339 6.704289 TGAATTAGCTCATAATGCTTGCTT 57.296 33.333 0.00 0.00 41.46 3.91
4112 4340 6.732154 TGAATTAGCTCATAATGCTTGCTTC 58.268 36.000 0.00 0.00 41.46 3.86
4113 4341 6.319405 TGAATTAGCTCATAATGCTTGCTTCA 59.681 34.615 0.00 0.00 41.46 3.02
4114 4342 5.490139 TTAGCTCATAATGCTTGCTTCAC 57.510 39.130 0.00 0.00 41.46 3.18
4115 4343 3.618351 AGCTCATAATGCTTGCTTCACT 58.382 40.909 0.00 0.00 37.52 3.41
4116 4344 4.774124 AGCTCATAATGCTTGCTTCACTA 58.226 39.130 0.00 0.00 37.52 2.74
4117 4345 4.815308 AGCTCATAATGCTTGCTTCACTAG 59.185 41.667 0.00 0.00 37.52 2.57
4118 4346 6.709994 AGCTCATAATGCTTGCTTCACTAGC 61.710 44.000 0.00 0.00 45.98 3.42
4128 4356 1.565305 CTTCACTAGCATCGTCCTGC 58.435 55.000 0.00 0.19 42.62 4.85
4129 4357 0.894835 TTCACTAGCATCGTCCTGCA 59.105 50.000 9.37 0.00 44.77 4.41
4130 4358 0.173481 TCACTAGCATCGTCCTGCAC 59.827 55.000 9.37 0.00 44.77 4.57
4131 4359 0.174389 CACTAGCATCGTCCTGCACT 59.826 55.000 9.37 0.00 44.77 4.40
4132 4360 0.174389 ACTAGCATCGTCCTGCACTG 59.826 55.000 9.37 2.98 44.77 3.66
4133 4361 0.174389 CTAGCATCGTCCTGCACTGT 59.826 55.000 9.37 0.00 44.77 3.55
4134 4362 0.608130 TAGCATCGTCCTGCACTGTT 59.392 50.000 9.37 0.00 44.77 3.16
4135 4363 0.250467 AGCATCGTCCTGCACTGTTT 60.250 50.000 9.37 0.00 44.77 2.83
4136 4364 0.166814 GCATCGTCCTGCACTGTTTC 59.833 55.000 3.18 0.00 41.87 2.78
4137 4365 1.511850 CATCGTCCTGCACTGTTTCA 58.488 50.000 0.00 0.00 0.00 2.69
4138 4366 1.462283 CATCGTCCTGCACTGTTTCAG 59.538 52.381 0.00 0.00 37.52 3.02
4139 4367 0.750249 TCGTCCTGCACTGTTTCAGA 59.250 50.000 3.70 0.00 35.18 3.27
4140 4368 1.344438 TCGTCCTGCACTGTTTCAGAT 59.656 47.619 3.70 0.00 35.18 2.90
4141 4369 2.560981 TCGTCCTGCACTGTTTCAGATA 59.439 45.455 3.70 0.00 35.18 1.98
4142 4370 2.926200 CGTCCTGCACTGTTTCAGATAG 59.074 50.000 3.70 0.00 35.18 2.08
4143 4371 3.367395 CGTCCTGCACTGTTTCAGATAGA 60.367 47.826 3.70 0.00 35.18 1.98
4144 4372 4.679106 CGTCCTGCACTGTTTCAGATAGAT 60.679 45.833 3.70 0.00 35.18 1.98
4145 4373 4.569966 GTCCTGCACTGTTTCAGATAGATG 59.430 45.833 3.70 0.00 35.18 2.90
4146 4374 3.311871 CCTGCACTGTTTCAGATAGATGC 59.688 47.826 3.70 3.58 35.18 3.91
4147 4375 3.273434 TGCACTGTTTCAGATAGATGCC 58.727 45.455 3.70 0.00 35.18 4.40
4148 4376 2.615912 GCACTGTTTCAGATAGATGCCC 59.384 50.000 3.70 0.00 35.18 5.36
4149 4377 3.209410 CACTGTTTCAGATAGATGCCCC 58.791 50.000 3.70 0.00 35.18 5.80
4150 4378 2.173569 ACTGTTTCAGATAGATGCCCCC 59.826 50.000 3.70 0.00 35.18 5.40
4151 4379 2.173356 CTGTTTCAGATAGATGCCCCCA 59.827 50.000 0.00 0.00 32.44 4.96
4152 4380 2.580322 TGTTTCAGATAGATGCCCCCAA 59.420 45.455 0.00 0.00 0.00 4.12
4153 4381 2.952310 GTTTCAGATAGATGCCCCCAAC 59.048 50.000 0.00 0.00 0.00 3.77
4154 4382 1.891933 TCAGATAGATGCCCCCAACA 58.108 50.000 0.00 0.00 0.00 3.33
4155 4383 1.490490 TCAGATAGATGCCCCCAACAC 59.510 52.381 0.00 0.00 0.00 3.32
4156 4384 1.492176 CAGATAGATGCCCCCAACACT 59.508 52.381 0.00 0.00 0.00 3.55
4157 4385 1.771255 AGATAGATGCCCCCAACACTC 59.229 52.381 0.00 0.00 0.00 3.51
4158 4386 1.771255 GATAGATGCCCCCAACACTCT 59.229 52.381 0.00 0.00 0.00 3.24
4159 4387 1.204146 TAGATGCCCCCAACACTCTC 58.796 55.000 0.00 0.00 0.00 3.20
4160 4388 0.842030 AGATGCCCCCAACACTCTCA 60.842 55.000 0.00 0.00 0.00 3.27
4161 4389 0.393537 GATGCCCCCAACACTCTCAG 60.394 60.000 0.00 0.00 0.00 3.35
4162 4390 0.842030 ATGCCCCCAACACTCTCAGA 60.842 55.000 0.00 0.00 0.00 3.27
4163 4391 0.842030 TGCCCCCAACACTCTCAGAT 60.842 55.000 0.00 0.00 0.00 2.90
4164 4392 0.329596 GCCCCCAACACTCTCAGATT 59.670 55.000 0.00 0.00 0.00 2.40
4165 4393 1.680249 GCCCCCAACACTCTCAGATTC 60.680 57.143 0.00 0.00 0.00 2.52
4166 4394 1.065126 CCCCCAACACTCTCAGATTCC 60.065 57.143 0.00 0.00 0.00 3.01
4167 4395 1.065126 CCCCAACACTCTCAGATTCCC 60.065 57.143 0.00 0.00 0.00 3.97
4168 4396 1.630369 CCCAACACTCTCAGATTCCCA 59.370 52.381 0.00 0.00 0.00 4.37
4169 4397 2.040278 CCCAACACTCTCAGATTCCCAA 59.960 50.000 0.00 0.00 0.00 4.12
4170 4398 3.077359 CCAACACTCTCAGATTCCCAAC 58.923 50.000 0.00 0.00 0.00 3.77
4171 4399 3.244700 CCAACACTCTCAGATTCCCAACT 60.245 47.826 0.00 0.00 0.00 3.16
4172 4400 4.020218 CCAACACTCTCAGATTCCCAACTA 60.020 45.833 0.00 0.00 0.00 2.24
4173 4401 5.513094 CCAACACTCTCAGATTCCCAACTAA 60.513 44.000 0.00 0.00 0.00 2.24
4174 4402 5.825593 ACACTCTCAGATTCCCAACTAAA 57.174 39.130 0.00 0.00 0.00 1.85
4175 4403 5.552178 ACACTCTCAGATTCCCAACTAAAC 58.448 41.667 0.00 0.00 0.00 2.01
4176 4404 4.938226 CACTCTCAGATTCCCAACTAAACC 59.062 45.833 0.00 0.00 0.00 3.27
4177 4405 4.846940 ACTCTCAGATTCCCAACTAAACCT 59.153 41.667 0.00 0.00 0.00 3.50
4178 4406 5.165961 TCTCAGATTCCCAACTAAACCTG 57.834 43.478 0.00 0.00 0.00 4.00
4179 4407 3.686016 TCAGATTCCCAACTAAACCTGC 58.314 45.455 0.00 0.00 0.00 4.85
4180 4408 2.755103 CAGATTCCCAACTAAACCTGCC 59.245 50.000 0.00 0.00 0.00 4.85
4181 4409 2.100197 GATTCCCAACTAAACCTGCCC 58.900 52.381 0.00 0.00 0.00 5.36
4182 4410 0.113580 TTCCCAACTAAACCTGCCCC 59.886 55.000 0.00 0.00 0.00 5.80
4410 4639 7.225538 ACTCTGAAGTGTTTGTAGATTCACAAG 59.774 37.037 0.00 0.00 35.64 3.16
4431 4660 6.262944 ACAAGCATTAATCAAGTGTGAGTTGA 59.737 34.615 0.00 0.00 41.31 3.18
4895 5130 8.740906 TGCTTTTCTCTATATATACTCCCTTCG 58.259 37.037 0.00 0.00 0.00 3.79
4896 5131 8.741841 GCTTTTCTCTATATATACTCCCTTCGT 58.258 37.037 0.00 0.00 0.00 3.85
4899 5134 8.804912 TTCTCTATATATACTCCCTTCGTTCC 57.195 38.462 0.00 0.00 0.00 3.62
4900 5135 7.344913 TCTCTATATATACTCCCTTCGTTCCC 58.655 42.308 0.00 0.00 0.00 3.97
4901 5136 7.036154 TCTATATATACTCCCTTCGTTCCCA 57.964 40.000 0.00 0.00 0.00 4.37
4902 5137 7.472741 TCTATATATACTCCCTTCGTTCCCAA 58.527 38.462 0.00 0.00 0.00 4.12
4903 5138 7.951806 TCTATATATACTCCCTTCGTTCCCAAA 59.048 37.037 0.00 0.00 0.00 3.28
4904 5139 5.906772 ATATACTCCCTTCGTTCCCAAAT 57.093 39.130 0.00 0.00 0.00 2.32
4905 5140 8.674925 ATATATACTCCCTTCGTTCCCAAATA 57.325 34.615 0.00 0.00 0.00 1.40
4906 5141 5.906772 ATACTCCCTTCGTTCCCAAATAT 57.093 39.130 0.00 0.00 0.00 1.28
4907 5142 4.586306 ACTCCCTTCGTTCCCAAATATT 57.414 40.909 0.00 0.00 0.00 1.28
4908 5143 4.930696 ACTCCCTTCGTTCCCAAATATTT 58.069 39.130 0.00 0.00 0.00 1.40
4909 5144 4.705023 ACTCCCTTCGTTCCCAAATATTTG 59.295 41.667 19.40 19.40 37.90 2.32
4910 5145 4.668636 TCCCTTCGTTCCCAAATATTTGT 58.331 39.130 23.24 0.00 36.45 2.83
4911 5146 4.703093 TCCCTTCGTTCCCAAATATTTGTC 59.297 41.667 23.24 11.68 36.45 3.18
4912 5147 4.705023 CCCTTCGTTCCCAAATATTTGTCT 59.295 41.667 23.24 0.00 36.45 3.41
4913 5148 5.185056 CCCTTCGTTCCCAAATATTTGTCTT 59.815 40.000 23.24 0.00 36.45 3.01
4914 5149 6.295067 CCCTTCGTTCCCAAATATTTGTCTTT 60.295 38.462 23.24 0.00 36.45 2.52
4915 5150 6.806739 CCTTCGTTCCCAAATATTTGTCTTTC 59.193 38.462 23.24 10.84 36.45 2.62
4916 5151 7.309194 CCTTCGTTCCCAAATATTTGTCTTTCT 60.309 37.037 23.24 0.00 36.45 2.52
4917 5152 8.624367 TTCGTTCCCAAATATTTGTCTTTCTA 57.376 30.769 23.24 4.96 36.45 2.10
4918 5153 8.263940 TCGTTCCCAAATATTTGTCTTTCTAG 57.736 34.615 23.24 8.23 36.45 2.43
4919 5154 8.098286 TCGTTCCCAAATATTTGTCTTTCTAGA 58.902 33.333 23.24 11.23 36.45 2.43
4920 5155 8.391106 CGTTCCCAAATATTTGTCTTTCTAGAG 58.609 37.037 23.24 7.00 36.45 2.43
4921 5156 9.449719 GTTCCCAAATATTTGTCTTTCTAGAGA 57.550 33.333 23.24 5.94 36.45 3.10
4932 5167 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
4933 5168 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
4934 5169 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
4935 5170 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
4936 5171 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
4937 5172 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
4938 5173 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
4939 5174 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
4940 5175 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
4941 5176 7.664082 AGAGATTTCAACAAGTGACTACATG 57.336 36.000 0.00 0.00 35.39 3.21
4942 5177 6.148480 AGAGATTTCAACAAGTGACTACATGC 59.852 38.462 0.00 0.00 35.39 4.06
4943 5178 4.466567 TTTCAACAAGTGACTACATGCG 57.533 40.909 0.00 0.00 35.39 4.73
4944 5179 3.378911 TCAACAAGTGACTACATGCGA 57.621 42.857 0.00 0.00 0.00 5.10
4945 5180 3.723260 TCAACAAGTGACTACATGCGAA 58.277 40.909 0.00 0.00 0.00 4.70
4946 5181 3.740832 TCAACAAGTGACTACATGCGAAG 59.259 43.478 0.00 0.00 0.00 3.79
4947 5182 7.254233 TTCAACAAGTGACTACATGCGAAGC 62.254 44.000 0.00 0.00 46.95 3.86
4966 5201 7.938971 CGAAGCAAAATAAGTGAATCTACAC 57.061 36.000 0.00 0.00 40.60 2.90
5002 5237 9.143155 TGTCTACATACATCCATATGTTGTAGT 57.857 33.333 22.56 15.48 44.07 2.73
5003 5238 9.627395 GTCTACATACATCCATATGTTGTAGTC 57.373 37.037 22.56 18.41 44.07 2.59
5004 5239 8.803235 TCTACATACATCCATATGTTGTAGTCC 58.197 37.037 22.56 0.00 44.07 3.85
5005 5240 7.373617 ACATACATCCATATGTTGTAGTCCA 57.626 36.000 16.38 1.84 44.07 4.02
5006 5241 7.977818 ACATACATCCATATGTTGTAGTCCAT 58.022 34.615 16.38 3.57 44.07 3.41
5007 5242 8.439971 ACATACATCCATATGTTGTAGTCCATT 58.560 33.333 16.38 2.34 44.07 3.16
5008 5243 9.288576 CATACATCCATATGTTGTAGTCCATTT 57.711 33.333 16.38 1.83 44.07 2.32
5011 5246 9.693739 ACATCCATATGTTGTAGTCCATTTAAA 57.306 29.630 1.24 0.00 44.07 1.52
5040 5275 8.263940 TCTAGAAAGACAAATATTTGGGAACG 57.736 34.615 27.43 11.14 42.34 3.95
5041 5276 6.267496 AGAAAGACAAATATTTGGGAACGG 57.733 37.500 27.43 5.66 42.34 4.44
5042 5277 6.007703 AGAAAGACAAATATTTGGGAACGGA 58.992 36.000 27.43 0.00 42.34 4.69
5043 5278 5.897377 AAGACAAATATTTGGGAACGGAG 57.103 39.130 27.43 4.34 42.34 4.63
5044 5279 4.270008 AGACAAATATTTGGGAACGGAGG 58.730 43.478 27.43 3.68 42.34 4.30
5045 5280 3.361786 ACAAATATTTGGGAACGGAGGG 58.638 45.455 27.43 3.22 42.34 4.30
5046 5281 3.010808 ACAAATATTTGGGAACGGAGGGA 59.989 43.478 27.43 0.00 42.34 4.20
5047 5282 3.577805 AATATTTGGGAACGGAGGGAG 57.422 47.619 0.00 0.00 0.00 4.30
5068 5303 4.822026 AGTAGTTTCCAGTGCATGTCTAC 58.178 43.478 0.00 0.00 0.00 2.59
5202 5439 4.514441 GCATTCCTGTGTCCAGATAATCTG 59.486 45.833 0.00 0.00 43.91 2.90
5203 5440 5.678583 CATTCCTGTGTCCAGATAATCTGT 58.321 41.667 0.00 0.00 42.80 3.41
5204 5441 4.743057 TCCTGTGTCCAGATAATCTGTG 57.257 45.455 0.00 0.00 42.80 3.66
5205 5442 3.452264 TCCTGTGTCCAGATAATCTGTGG 59.548 47.826 0.00 0.00 42.80 4.17
5206 5443 3.432749 CCTGTGTCCAGATAATCTGTGGG 60.433 52.174 0.00 0.00 42.80 4.61
5207 5444 2.092968 TGTGTCCAGATAATCTGTGGGC 60.093 50.000 0.00 0.22 43.20 5.36
5208 5445 2.171448 GTGTCCAGATAATCTGTGGGCT 59.829 50.000 4.33 0.00 43.30 5.19
5209 5446 2.435805 TGTCCAGATAATCTGTGGGCTC 59.564 50.000 4.33 0.00 43.30 4.70
5210 5447 2.050144 TCCAGATAATCTGTGGGCTCC 58.950 52.381 0.00 0.00 42.80 4.70
5211 5448 2.053244 CCAGATAATCTGTGGGCTCCT 58.947 52.381 0.00 0.00 42.80 3.69
5212 5449 2.224475 CCAGATAATCTGTGGGCTCCTG 60.224 54.545 0.00 0.00 42.80 3.86
5213 5450 2.702478 CAGATAATCTGTGGGCTCCTGA 59.298 50.000 0.00 0.00 39.58 3.86
5214 5451 3.327172 CAGATAATCTGTGGGCTCCTGAT 59.673 47.826 0.00 0.00 39.58 2.90
5215 5452 4.529769 CAGATAATCTGTGGGCTCCTGATA 59.470 45.833 0.00 0.00 39.58 2.15
5216 5453 5.012458 CAGATAATCTGTGGGCTCCTGATAA 59.988 44.000 0.00 0.00 39.58 1.75
5217 5454 5.789575 AGATAATCTGTGGGCTCCTGATAAT 59.210 40.000 0.00 0.00 0.00 1.28
5218 5455 4.363991 AATCTGTGGGCTCCTGATAATC 57.636 45.455 0.00 0.00 0.00 1.75
5219 5456 3.051940 TCTGTGGGCTCCTGATAATCT 57.948 47.619 0.00 0.00 0.00 2.40
5376 5613 2.969016 CTGAGAGACAGCCGTGCT 59.031 61.111 0.00 0.00 39.86 4.40
5400 5637 4.759183 GGCCATCCAGATTATCAGTTCTTC 59.241 45.833 0.00 0.00 0.00 2.87
5503 5740 7.041098 AGTGTCTTGTGAACATGATTAAGTTCC 60.041 37.037 0.00 0.00 42.57 3.62
5504 5741 6.770303 TGTCTTGTGAACATGATTAAGTTCCA 59.230 34.615 0.00 0.00 42.57 3.53
5621 5858 7.730364 AATTGCACTAATAGGTAGATTTCGG 57.270 36.000 0.00 0.00 33.61 4.30
5737 5974 2.418609 GGTGGTGAAAAAGCTTGCACTT 60.419 45.455 20.08 2.02 40.56 3.16
5738 5975 2.860136 GTGGTGAAAAAGCTTGCACTTC 59.140 45.455 20.08 12.76 40.56 3.01
5739 5976 2.495270 TGGTGAAAAAGCTTGCACTTCA 59.505 40.909 20.08 14.60 40.56 3.02
5740 5977 3.118542 GGTGAAAAAGCTTGCACTTCAG 58.881 45.455 20.08 0.00 40.56 3.02
5741 5978 3.181487 GGTGAAAAAGCTTGCACTTCAGA 60.181 43.478 20.08 0.00 40.56 3.27
5742 5979 4.500375 GGTGAAAAAGCTTGCACTTCAGAT 60.500 41.667 20.08 0.00 40.56 2.90
5743 5980 4.443394 GTGAAAAAGCTTGCACTTCAGATG 59.557 41.667 15.95 0.00 38.01 2.90
5744 5981 4.098349 TGAAAAAGCTTGCACTTCAGATGT 59.902 37.500 0.00 0.00 0.00 3.06
5745 5982 5.299028 TGAAAAAGCTTGCACTTCAGATGTA 59.701 36.000 0.00 0.00 0.00 2.29
5746 5983 5.368256 AAAAGCTTGCACTTCAGATGTAG 57.632 39.130 0.00 0.00 0.00 2.74
5747 5984 3.692257 AGCTTGCACTTCAGATGTAGT 57.308 42.857 0.00 0.00 0.00 2.73
5748 5985 4.013267 AGCTTGCACTTCAGATGTAGTT 57.987 40.909 0.00 0.00 0.00 2.24
5749 5986 4.392940 AGCTTGCACTTCAGATGTAGTTT 58.607 39.130 0.00 0.00 0.00 2.66
5750 5987 4.214971 AGCTTGCACTTCAGATGTAGTTTG 59.785 41.667 0.00 0.00 0.00 2.93
5751 5988 4.214119 GCTTGCACTTCAGATGTAGTTTGA 59.786 41.667 0.00 0.00 0.00 2.69
5752 5989 5.616424 GCTTGCACTTCAGATGTAGTTTGAG 60.616 44.000 0.00 0.00 0.00 3.02
5753 5990 3.748048 TGCACTTCAGATGTAGTTTGAGC 59.252 43.478 0.00 0.00 0.00 4.26
5754 5991 3.999663 GCACTTCAGATGTAGTTTGAGCT 59.000 43.478 0.00 0.00 0.00 4.09
5755 5992 4.142945 GCACTTCAGATGTAGTTTGAGCTG 60.143 45.833 0.00 0.00 0.00 4.24
5756 5993 4.993584 CACTTCAGATGTAGTTTGAGCTGT 59.006 41.667 0.00 0.00 0.00 4.40
5757 5994 5.119898 CACTTCAGATGTAGTTTGAGCTGTC 59.880 44.000 0.00 0.00 0.00 3.51
5758 5995 4.193826 TCAGATGTAGTTTGAGCTGTCC 57.806 45.455 0.00 0.00 0.00 4.02
5759 5996 3.578282 TCAGATGTAGTTTGAGCTGTCCA 59.422 43.478 0.00 0.00 0.00 4.02
5760 5997 4.040339 TCAGATGTAGTTTGAGCTGTCCAA 59.960 41.667 0.00 0.00 0.00 3.53
5761 5998 4.153117 CAGATGTAGTTTGAGCTGTCCAAC 59.847 45.833 0.00 0.00 0.00 3.77
5942 6208 3.510459 TGAGACACTTTGAGATGGAGGA 58.490 45.455 0.00 0.00 0.00 3.71
5956 6224 3.543680 TGGAGGAAGTAGTTAGCATGC 57.456 47.619 10.51 10.51 0.00 4.06
5970 6238 2.814269 AGCATGCTGTCATAGTGTACG 58.186 47.619 21.98 0.00 0.00 3.67
6183 6572 6.317893 ACCAACGATGAAGAGTAAAAACTGTT 59.682 34.615 0.00 0.00 0.00 3.16
6255 6934 0.598065 GTTCGCTTTGACAAGGGCAT 59.402 50.000 13.15 0.00 41.68 4.40
6270 6949 2.820787 AGGGCATCGTGTCTAGTATAGC 59.179 50.000 0.00 0.00 38.99 2.97
6273 6952 4.477780 GGCATCGTGTCTAGTATAGCTTC 58.522 47.826 0.00 0.00 38.99 3.86
6289 6968 8.709308 AGTATAGCTTCAGTATTCCTGTCAATT 58.291 33.333 0.00 0.00 42.19 2.32
6302 6981 3.804325 CCTGTCAATTAGTGAGTATGCCG 59.196 47.826 0.00 0.00 36.74 5.69
6318 6997 0.109781 GCCGCACCACACAATAACTG 60.110 55.000 0.00 0.00 0.00 3.16
6355 7034 9.911788 ACACTATTGATTGGAGTGATTAATCTT 57.088 29.630 16.24 5.03 42.65 2.40
6406 7085 0.453390 CCGATGCTGGAAAAAGAGGC 59.547 55.000 0.00 0.00 0.00 4.70
6420 7099 3.659089 GAGGCCGCGGCAGTTTCTA 62.659 63.158 46.88 0.00 44.11 2.10
6421 7100 2.513897 GGCCGCGGCAGTTTCTAT 60.514 61.111 46.88 0.00 44.11 1.98
6422 7101 2.112815 GGCCGCGGCAGTTTCTATT 61.113 57.895 46.88 0.00 44.11 1.73
6423 7102 0.812412 GGCCGCGGCAGTTTCTATTA 60.812 55.000 46.88 0.00 44.11 0.98
6424 7103 1.011333 GCCGCGGCAGTTTCTATTAA 58.989 50.000 43.55 0.00 41.49 1.40
6425 7104 1.399089 GCCGCGGCAGTTTCTATTAAA 59.601 47.619 43.55 0.00 41.49 1.52
6426 7105 2.032924 GCCGCGGCAGTTTCTATTAAAT 59.967 45.455 43.55 0.00 41.49 1.40
6427 7106 3.488553 GCCGCGGCAGTTTCTATTAAATT 60.489 43.478 43.55 0.00 41.49 1.82
6428 7107 4.035017 CCGCGGCAGTTTCTATTAAATTG 58.965 43.478 14.67 0.00 0.00 2.32
6429 7108 4.438200 CCGCGGCAGTTTCTATTAAATTGT 60.438 41.667 14.67 0.00 0.00 2.71
6430 7109 4.495472 CGCGGCAGTTTCTATTAAATTGTG 59.505 41.667 0.00 0.00 0.00 3.33
6431 7110 5.636837 GCGGCAGTTTCTATTAAATTGTGA 58.363 37.500 0.00 0.00 0.00 3.58
6432 7111 6.265577 GCGGCAGTTTCTATTAAATTGTGAT 58.734 36.000 0.00 0.00 0.00 3.06
6433 7112 6.751888 GCGGCAGTTTCTATTAAATTGTGATT 59.248 34.615 0.00 0.00 0.00 2.57
6434 7113 7.044052 GCGGCAGTTTCTATTAAATTGTGATTC 60.044 37.037 0.00 0.00 0.00 2.52
6435 7114 7.967854 CGGCAGTTTCTATTAAATTGTGATTCA 59.032 33.333 0.00 0.00 0.00 2.57
6436 7115 9.638239 GGCAGTTTCTATTAAATTGTGATTCAA 57.362 29.630 0.00 0.00 40.53 2.69
6466 7145 7.870509 ATTGTATTGGACTAGACGTAGTACA 57.129 36.000 0.00 0.00 46.79 2.90
6478 7157 2.214387 GTAGTACATACGGTGTGGGC 57.786 55.000 9.73 1.92 42.24 5.36
6479 7158 1.113788 TAGTACATACGGTGTGGGCC 58.886 55.000 9.73 0.00 42.24 5.80
6480 7159 0.616679 AGTACATACGGTGTGGGCCT 60.617 55.000 4.53 0.00 42.24 5.19
6481 7160 0.251073 GTACATACGGTGTGGGCCTT 59.749 55.000 4.53 0.00 42.24 4.35
6482 7161 0.985760 TACATACGGTGTGGGCCTTT 59.014 50.000 4.53 0.00 42.24 3.11
6483 7162 0.608035 ACATACGGTGTGGGCCTTTG 60.608 55.000 4.53 0.00 40.28 2.77
6484 7163 1.677633 ATACGGTGTGGGCCTTTGC 60.678 57.895 4.53 0.00 0.00 3.68
6487 7166 3.223589 GGTGTGGGCCTTTGCGTT 61.224 61.111 4.53 0.00 38.85 4.84
6488 7167 2.027460 GTGTGGGCCTTTGCGTTG 59.973 61.111 4.53 0.00 38.85 4.10
6489 7168 3.222855 TGTGGGCCTTTGCGTTGG 61.223 61.111 4.53 0.00 38.85 3.77
6490 7169 3.223589 GTGGGCCTTTGCGTTGGT 61.224 61.111 4.53 0.00 38.85 3.67
6491 7170 1.899534 GTGGGCCTTTGCGTTGGTA 60.900 57.895 4.53 0.00 38.85 3.25
6492 7171 1.899534 TGGGCCTTTGCGTTGGTAC 60.900 57.895 4.53 0.00 38.85 3.34
6493 7172 2.632544 GGGCCTTTGCGTTGGTACC 61.633 63.158 4.43 4.43 38.85 3.34
6494 7173 2.559330 GCCTTTGCGTTGGTACCG 59.441 61.111 7.57 0.00 0.00 4.02
6495 7174 1.962306 GCCTTTGCGTTGGTACCGA 60.962 57.895 7.57 1.50 0.00 4.69
6496 7175 1.864176 CCTTTGCGTTGGTACCGAC 59.136 57.895 20.98 20.98 0.00 4.79
6502 7181 3.700577 CGTTGGTACCGACGTGTAT 57.299 52.632 36.56 0.00 45.70 2.29
6503 7182 1.261989 CGTTGGTACCGACGTGTATG 58.738 55.000 36.56 15.50 45.70 2.39
6504 7183 1.135717 CGTTGGTACCGACGTGTATGA 60.136 52.381 36.56 1.78 45.70 2.15
6505 7184 2.478370 CGTTGGTACCGACGTGTATGAT 60.478 50.000 36.56 0.00 45.70 2.45
6506 7185 3.514645 GTTGGTACCGACGTGTATGATT 58.485 45.455 16.68 0.00 0.00 2.57
6507 7186 4.671377 GTTGGTACCGACGTGTATGATTA 58.329 43.478 16.68 0.00 0.00 1.75
6508 7187 5.284079 GTTGGTACCGACGTGTATGATTAT 58.716 41.667 16.68 0.00 0.00 1.28
6509 7188 6.437928 GTTGGTACCGACGTGTATGATTATA 58.562 40.000 16.68 0.00 0.00 0.98
6510 7189 6.631971 TGGTACCGACGTGTATGATTATAA 57.368 37.500 7.57 0.00 0.00 0.98
6511 7190 6.437928 TGGTACCGACGTGTATGATTATAAC 58.562 40.000 7.57 0.00 0.00 1.89
6512 7191 6.262944 TGGTACCGACGTGTATGATTATAACT 59.737 38.462 7.57 0.00 0.00 2.24
6513 7192 7.141363 GGTACCGACGTGTATGATTATAACTT 58.859 38.462 0.00 0.00 0.00 2.66
6514 7193 7.113965 GGTACCGACGTGTATGATTATAACTTG 59.886 40.741 0.00 0.00 0.00 3.16
6515 7194 6.567050 ACCGACGTGTATGATTATAACTTGT 58.433 36.000 0.00 0.00 0.00 3.16
6516 7195 7.037438 ACCGACGTGTATGATTATAACTTGTT 58.963 34.615 0.00 0.00 0.00 2.83
6517 7196 7.546667 ACCGACGTGTATGATTATAACTTGTTT 59.453 33.333 0.00 0.00 0.00 2.83
6518 7197 9.022915 CCGACGTGTATGATTATAACTTGTTTA 57.977 33.333 0.00 0.00 0.00 2.01
6519 7198 9.825391 CGACGTGTATGATTATAACTTGTTTAC 57.175 33.333 0.00 0.00 0.00 2.01
6547 7226 7.391148 TCCTTCAAGGACTTTTATGTATTGC 57.609 36.000 0.34 0.00 40.06 3.56
6548 7227 6.377146 TCCTTCAAGGACTTTTATGTATTGCC 59.623 38.462 0.34 0.00 40.06 4.52
6549 7228 6.405842 CCTTCAAGGACTTTTATGTATTGCCC 60.406 42.308 0.00 0.00 37.67 5.36
6550 7229 5.826643 TCAAGGACTTTTATGTATTGCCCT 58.173 37.500 0.00 0.00 0.00 5.19
6551 7230 5.885912 TCAAGGACTTTTATGTATTGCCCTC 59.114 40.000 0.00 0.00 0.00 4.30
6552 7231 5.450818 AGGACTTTTATGTATTGCCCTCA 57.549 39.130 0.00 0.00 0.00 3.86
6553 7232 6.018433 AGGACTTTTATGTATTGCCCTCAT 57.982 37.500 0.00 0.00 0.00 2.90
6554 7233 7.149202 AGGACTTTTATGTATTGCCCTCATA 57.851 36.000 0.00 0.00 0.00 2.15
6555 7234 7.759607 AGGACTTTTATGTATTGCCCTCATAT 58.240 34.615 0.00 0.00 0.00 1.78
6556 7235 7.667219 AGGACTTTTATGTATTGCCCTCATATG 59.333 37.037 0.00 0.00 0.00 1.78
6557 7236 7.448469 GGACTTTTATGTATTGCCCTCATATGT 59.552 37.037 1.90 0.00 0.00 2.29
6558 7237 9.502091 GACTTTTATGTATTGCCCTCATATGTA 57.498 33.333 1.90 0.00 0.00 2.29
6559 7238 9.284968 ACTTTTATGTATTGCCCTCATATGTAC 57.715 33.333 1.90 0.00 0.00 2.90
6560 7239 8.630054 TTTTATGTATTGCCCTCATATGTACC 57.370 34.615 1.90 0.00 0.00 3.34
6561 7240 4.634012 TGTATTGCCCTCATATGTACCC 57.366 45.455 1.90 0.00 0.00 3.69
6562 7241 3.329520 TGTATTGCCCTCATATGTACCCC 59.670 47.826 1.90 0.00 0.00 4.95
6563 7242 1.900254 TTGCCCTCATATGTACCCCA 58.100 50.000 1.90 0.00 0.00 4.96
6564 7243 2.132303 TGCCCTCATATGTACCCCAT 57.868 50.000 1.90 0.00 37.58 4.00
6565 7244 3.283712 TGCCCTCATATGTACCCCATA 57.716 47.619 1.90 0.00 40.27 2.74
6566 7245 3.814284 TGCCCTCATATGTACCCCATAT 58.186 45.455 1.90 0.00 45.67 1.78
6567 7246 4.966611 TGCCCTCATATGTACCCCATATA 58.033 43.478 1.90 0.00 43.46 0.86
6568 7247 4.968719 TGCCCTCATATGTACCCCATATAG 59.031 45.833 1.90 0.00 43.46 1.31
6569 7248 4.969359 GCCCTCATATGTACCCCATATAGT 59.031 45.833 1.90 0.00 43.46 2.12
6570 7249 5.070580 GCCCTCATATGTACCCCATATAGTC 59.929 48.000 1.90 0.00 43.46 2.59
6571 7250 5.302059 CCCTCATATGTACCCCATATAGTCG 59.698 48.000 1.90 0.00 43.46 4.18
6572 7251 5.221263 CCTCATATGTACCCCATATAGTCGC 60.221 48.000 1.90 0.00 43.46 5.19
6573 7252 5.265989 TCATATGTACCCCATATAGTCGCA 58.734 41.667 1.90 0.00 43.46 5.10
6574 7253 3.955650 ATGTACCCCATATAGTCGCAC 57.044 47.619 0.00 0.00 29.82 5.34
6575 7254 1.610038 TGTACCCCATATAGTCGCACG 59.390 52.381 0.00 0.00 0.00 5.34
6576 7255 1.610522 GTACCCCATATAGTCGCACGT 59.389 52.381 0.00 0.00 0.00 4.49
6577 7256 1.985473 ACCCCATATAGTCGCACGTA 58.015 50.000 0.00 0.00 0.00 3.57
6578 7257 2.309613 ACCCCATATAGTCGCACGTAA 58.690 47.619 0.00 0.00 0.00 3.18
6579 7258 2.694628 ACCCCATATAGTCGCACGTAAA 59.305 45.455 0.00 0.00 0.00 2.01
6580 7259 3.243636 ACCCCATATAGTCGCACGTAAAG 60.244 47.826 0.00 0.00 0.00 1.85
6581 7260 3.005050 CCCCATATAGTCGCACGTAAAGA 59.995 47.826 0.00 0.00 0.00 2.52
6582 7261 3.979495 CCCATATAGTCGCACGTAAAGAC 59.021 47.826 8.59 8.59 35.30 3.01
6599 7278 3.363875 CGATGTGTCGTCTCGTGC 58.636 61.111 0.00 0.00 42.78 5.34
6600 7279 1.154207 CGATGTGTCGTCTCGTGCT 60.154 57.895 0.00 0.00 42.78 4.40
6601 7280 0.729478 CGATGTGTCGTCTCGTGCTT 60.729 55.000 0.00 0.00 42.78 3.91
6602 7281 0.710567 GATGTGTCGTCTCGTGCTTG 59.289 55.000 0.00 0.00 0.00 4.01
6603 7282 0.032130 ATGTGTCGTCTCGTGCTTGT 59.968 50.000 0.00 0.00 0.00 3.16
6604 7283 0.664224 TGTGTCGTCTCGTGCTTGTA 59.336 50.000 0.00 0.00 0.00 2.41
6605 7284 1.065851 TGTGTCGTCTCGTGCTTGTAA 59.934 47.619 0.00 0.00 0.00 2.41
6606 7285 2.287970 TGTGTCGTCTCGTGCTTGTAAT 60.288 45.455 0.00 0.00 0.00 1.89
6607 7286 3.058085 TGTGTCGTCTCGTGCTTGTAATA 60.058 43.478 0.00 0.00 0.00 0.98
6608 7287 3.300066 GTGTCGTCTCGTGCTTGTAATAC 59.700 47.826 0.00 0.00 0.00 1.89
6609 7288 3.189910 TGTCGTCTCGTGCTTGTAATACT 59.810 43.478 0.00 0.00 0.00 2.12
6610 7289 4.392754 TGTCGTCTCGTGCTTGTAATACTA 59.607 41.667 0.00 0.00 0.00 1.82
6611 7290 5.106594 TGTCGTCTCGTGCTTGTAATACTAA 60.107 40.000 0.00 0.00 0.00 2.24
6612 7291 5.970023 GTCGTCTCGTGCTTGTAATACTAAT 59.030 40.000 0.00 0.00 0.00 1.73
6613 7292 7.128331 GTCGTCTCGTGCTTGTAATACTAATA 58.872 38.462 0.00 0.00 0.00 0.98
6614 7293 7.320797 GTCGTCTCGTGCTTGTAATACTAATAG 59.679 40.741 0.00 0.00 0.00 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 2.044555 GGCCTAGGTTTTCGGCACC 61.045 63.158 11.31 0.00 45.53 5.01
19 20 1.814169 GCTCGGGCCTAGGTTTTCG 60.814 63.158 11.31 9.43 0.00 3.46
63 64 0.533085 GGGCTCGGGTCTGATTTAGC 60.533 60.000 0.00 0.00 0.00 3.09
104 116 2.125961 ATAGCCGGGTCAGGTCGAC 61.126 63.158 10.79 7.13 44.57 4.20
111 123 0.913205 TTTTAGCCATAGCCGGGTCA 59.087 50.000 10.79 0.00 41.25 4.02
113 125 2.748209 AATTTTAGCCATAGCCGGGT 57.252 45.000 12.58 12.58 41.25 5.28
131 143 1.202417 TCGGGATTGCGCAAAACAAAA 60.202 42.857 28.81 8.62 0.00 2.44
133 145 0.039617 CTCGGGATTGCGCAAAACAA 60.040 50.000 28.81 13.04 0.00 2.83
201 213 2.821366 GCCTGAGTGTGCCATCGG 60.821 66.667 0.00 0.00 0.00 4.18
215 227 0.970937 TCTCGAATCGGGTTGAGCCT 60.971 55.000 1.26 0.00 37.43 4.58
222 234 2.484947 GCCCTAAAATCTCGAATCGGGT 60.485 50.000 1.26 0.00 33.00 5.28
227 239 2.484947 GGACGGCCCTAAAATCTCGAAT 60.485 50.000 0.00 0.00 0.00 3.34
229 241 0.462789 GGACGGCCCTAAAATCTCGA 59.537 55.000 0.00 0.00 0.00 4.04
231 243 0.532196 CCGGACGGCCCTAAAATCTC 60.532 60.000 0.00 0.00 0.00 2.75
232 244 0.979187 TCCGGACGGCCCTAAAATCT 60.979 55.000 0.00 0.00 34.68 2.40
249 261 4.828296 CCATGGGCAGCCTGGTCC 62.828 72.222 12.43 0.00 0.00 4.46
265 277 4.378459 GCGACATTATTGCTATACTTGGCC 60.378 45.833 0.00 0.00 34.45 5.36
268 280 4.154195 GGGGCGACATTATTGCTATACTTG 59.846 45.833 0.00 0.00 37.90 3.16
270 282 3.326588 TGGGGCGACATTATTGCTATACT 59.673 43.478 0.00 0.00 37.90 2.12
292 304 4.729918 CGGCTTGAAGCTGGGCCT 62.730 66.667 18.03 0.00 43.75 5.19
304 317 0.759346 ATCCTAGGATTTCGCGGCTT 59.241 50.000 19.18 0.00 0.00 4.35
318 331 0.659133 ATGGGGAGGGGGAAATCCTA 59.341 55.000 0.00 0.00 35.80 2.94
354 367 0.965363 AGTTAGCACGGCCCATTTGG 60.965 55.000 0.00 0.00 37.09 3.28
378 391 2.048597 TTGCGTGCTACCAGGTCG 60.049 61.111 0.00 0.00 0.00 4.79
383 396 0.942410 GTCGTTCTTGCGTGCTACCA 60.942 55.000 0.00 0.00 0.00 3.25
391 404 2.748546 CTTGCCGTGTCGTTCTTGCG 62.749 60.000 0.00 0.00 0.00 4.85
406 419 2.700773 CGTTTAGCCCAGGCCTTGC 61.701 63.158 14.94 14.94 43.17 4.01
488 501 9.744468 AAAAAGATAATAATAAACGGGTCATGC 57.256 29.630 0.00 0.00 0.00 4.06
535 548 9.797556 GCCTATTTTTGGATTCTAATTTACGTT 57.202 29.630 0.00 0.00 0.00 3.99
598 613 1.820519 CCTGTGGCACATTTAGCACAT 59.179 47.619 22.35 0.00 44.52 3.21
616 631 5.357032 CCTGATTTATTAAACAGAACGGCCT 59.643 40.000 0.00 0.00 32.90 5.19
622 637 5.392595 GCACGGCCTGATTTATTAAACAGAA 60.393 40.000 0.00 0.00 32.90 3.02
623 638 4.095782 GCACGGCCTGATTTATTAAACAGA 59.904 41.667 0.00 0.00 32.90 3.41
625 640 3.129638 GGCACGGCCTGATTTATTAAACA 59.870 43.478 0.00 0.00 46.69 2.83
626 641 3.702330 GGCACGGCCTGATTTATTAAAC 58.298 45.455 0.00 0.00 46.69 2.01
646 661 1.673665 GCACTGCTCTTGGTCCAGG 60.674 63.158 0.00 0.00 0.00 4.45
658 673 3.488090 GCCGGTTACGAGCACTGC 61.488 66.667 1.90 0.00 44.60 4.40
659 674 2.048597 TGCCGGTTACGAGCACTG 60.049 61.111 1.90 0.00 44.60 3.66
662 677 4.728102 CCGTGCCGGTTACGAGCA 62.728 66.667 27.34 5.62 43.82 4.26
690 707 2.678836 CCCATCGTGGCACGTTTAATAA 59.321 45.455 35.65 18.03 43.14 1.40
714 731 4.849310 TGCTAATCGTGCCGGGCC 62.849 66.667 17.97 7.00 0.00 5.80
715 732 3.573491 GTGCTAATCGTGCCGGGC 61.573 66.667 13.32 13.32 0.00 6.13
716 733 3.261951 CGTGCTAATCGTGCCGGG 61.262 66.667 2.18 0.00 0.00 5.73
717 734 3.261951 CCGTGCTAATCGTGCCGG 61.262 66.667 0.00 0.00 37.69 6.13
718 735 3.261951 CCCGTGCTAATCGTGCCG 61.262 66.667 0.00 0.00 0.00 5.69
719 736 3.573491 GCCCGTGCTAATCGTGCC 61.573 66.667 0.00 0.00 33.53 5.01
720 737 3.573491 GGCCCGTGCTAATCGTGC 61.573 66.667 0.00 0.00 37.74 5.34
721 738 2.125310 TGGCCCGTGCTAATCGTG 60.125 61.111 0.00 0.00 37.74 4.35
722 739 2.186903 CTGGCCCGTGCTAATCGT 59.813 61.111 0.00 0.00 37.74 3.73
723 740 2.588877 CCTGGCCCGTGCTAATCG 60.589 66.667 0.00 0.00 37.74 3.34
724 741 2.902343 GCCTGGCCCGTGCTAATC 60.902 66.667 7.66 0.00 37.74 1.75
725 742 4.506255 GGCCTGGCCCGTGCTAAT 62.506 66.667 27.77 0.00 44.06 1.73
779 796 2.764547 GGAGGAGGAAGACGGGGG 60.765 72.222 0.00 0.00 0.00 5.40
812 829 3.859411 TGTTGGCTTTTATAAAGGGCG 57.141 42.857 23.07 5.74 42.33 6.13
883 900 3.609853 TCGATTGGAGGAAATGACAAGG 58.390 45.455 0.00 0.00 0.00 3.61
884 901 5.824904 ATTCGATTGGAGGAAATGACAAG 57.175 39.130 0.00 0.00 0.00 3.16
885 902 5.953183 CAATTCGATTGGAGGAAATGACAA 58.047 37.500 0.00 0.00 36.63 3.18
886 903 5.565592 CAATTCGATTGGAGGAAATGACA 57.434 39.130 0.00 0.00 36.63 3.58
1588 1605 6.709018 ACACAAAAATAAGCTGTTACCAGT 57.291 33.333 0.00 0.00 41.02 4.00
1610 1627 3.378427 GGACCCATAGCACTCAAATCAAC 59.622 47.826 0.00 0.00 0.00 3.18
1732 1749 4.702131 ACAGAACCATTGGAGATTAAGTGC 59.298 41.667 10.37 0.00 0.00 4.40
1748 1765 2.094258 CGCATACACACATCACAGAACC 59.906 50.000 0.00 0.00 0.00 3.62
2013 2031 9.973450 TTCAAATTCGTTGATAAAGGATGAAAA 57.027 25.926 0.00 0.00 45.71 2.29
2052 2196 6.860023 CAGATAAAAAGCACTTGAAGTTCTGG 59.140 38.462 10.13 0.00 0.00 3.86
2359 2503 8.845942 ACTCTAAAAACGGAAAACACAAATAC 57.154 30.769 0.00 0.00 0.00 1.89
2365 2509 6.849588 TCCTACTCTAAAAACGGAAAACAC 57.150 37.500 0.00 0.00 0.00 3.32
2436 2580 5.688823 TGCAGATGATTACGTCTTGTTTTG 58.311 37.500 0.00 0.00 39.99 2.44
2437 2581 5.940192 TGCAGATGATTACGTCTTGTTTT 57.060 34.783 0.00 0.00 39.99 2.43
2447 2591 5.827797 TCATAAACCCCTTGCAGATGATTAC 59.172 40.000 0.00 0.00 0.00 1.89
2555 2699 7.817962 ACTTAGTAGTTGCAGTATGTTTACAGG 59.182 37.037 0.00 0.00 39.31 4.00
2564 2708 9.991906 TTTTGAGTTACTTAGTAGTTGCAGTAT 57.008 29.630 0.00 0.00 35.78 2.12
2625 2769 2.558359 GAGCTACATGCACCAGGTTTTT 59.442 45.455 0.00 0.00 45.94 1.94
2627 2771 1.826385 GAGCTACATGCACCAGGTTT 58.174 50.000 0.00 0.00 45.94 3.27
2628 2772 3.558674 GAGCTACATGCACCAGGTT 57.441 52.632 0.00 0.00 45.94 3.50
2653 2797 4.785453 CTTCCCTGGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
2654 2798 4.101448 CCTTCCCTGGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
2655 2799 3.732849 CCCTTCCCTGGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
2656 2800 2.204151 ACCCTTCCCTGGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
2657 2801 2.125225 GACCCTTCCCTGGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
2658 2802 3.015753 GGACCCTTCCCTGGACCC 61.016 72.222 0.00 0.00 35.57 4.46
2659 2803 3.400054 CGGACCCTTCCCTGGACC 61.400 72.222 0.00 0.00 38.99 4.46
2660 2804 2.284405 TCGGACCCTTCCCTGGAC 60.284 66.667 0.00 0.00 38.99 4.02
2661 2805 2.284405 GTCGGACCCTTCCCTGGA 60.284 66.667 0.00 0.00 38.99 3.86
2662 2806 3.400054 GGTCGGACCCTTCCCTGG 61.400 72.222 16.55 0.00 38.99 4.45
2663 2807 2.606519 TGGTCGGACCCTTCCCTG 60.607 66.667 23.81 0.00 38.99 4.45
2664 2808 2.606826 GTGGTCGGACCCTTCCCT 60.607 66.667 23.81 0.00 38.99 4.20
2665 2809 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
2666 2810 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
2667 2811 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
2668 2812 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
2669 2813 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
2670 2814 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
2671 2815 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
2672 2816 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
2677 2821 3.131755 GCGTACTATAGACCCAAAGTGGT 59.868 47.826 6.78 0.00 42.79 4.16
2678 2822 3.131577 TGCGTACTATAGACCCAAAGTGG 59.868 47.826 6.78 0.00 37.25 4.00
2679 2823 4.360563 CTGCGTACTATAGACCCAAAGTG 58.639 47.826 6.78 0.00 0.00 3.16
2680 2824 3.181478 GCTGCGTACTATAGACCCAAAGT 60.181 47.826 6.78 0.00 0.00 2.66
2681 2825 3.381949 GCTGCGTACTATAGACCCAAAG 58.618 50.000 6.78 0.00 0.00 2.77
2682 2826 2.101917 GGCTGCGTACTATAGACCCAAA 59.898 50.000 6.78 0.00 0.00 3.28
2683 2827 1.684983 GGCTGCGTACTATAGACCCAA 59.315 52.381 6.78 0.00 0.00 4.12
2684 2828 1.133575 AGGCTGCGTACTATAGACCCA 60.134 52.381 6.78 0.00 0.00 4.51
2685 2829 1.618487 AGGCTGCGTACTATAGACCC 58.382 55.000 6.78 0.00 0.00 4.46
2686 2830 3.552478 GGAAAGGCTGCGTACTATAGACC 60.552 52.174 6.78 0.00 0.00 3.85
2687 2831 3.552478 GGGAAAGGCTGCGTACTATAGAC 60.552 52.174 6.78 0.00 0.00 2.59
2688 2832 2.626743 GGGAAAGGCTGCGTACTATAGA 59.373 50.000 6.78 0.00 0.00 1.98
2689 2833 2.628657 AGGGAAAGGCTGCGTACTATAG 59.371 50.000 0.00 0.00 0.00 1.31
2690 2834 2.674420 AGGGAAAGGCTGCGTACTATA 58.326 47.619 0.00 0.00 0.00 1.31
2691 2835 1.497161 AGGGAAAGGCTGCGTACTAT 58.503 50.000 0.00 0.00 0.00 2.12
2692 2836 1.753073 GTAGGGAAAGGCTGCGTACTA 59.247 52.381 0.00 0.00 34.81 1.82
2693 2837 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73
2694 2838 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
2695 2839 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
2696 2840 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
2697 2841 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
2698 2842 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
2699 2843 3.690460 ACAGAAATGTAGGGAAAGGCTG 58.310 45.455 0.00 0.00 0.00 4.85
2700 2844 5.250774 TCTTACAGAAATGTAGGGAAAGGCT 59.749 40.000 0.00 0.00 0.00 4.58
2701 2845 5.497474 TCTTACAGAAATGTAGGGAAAGGC 58.503 41.667 0.00 0.00 0.00 4.35
2702 2846 6.116126 CCTCTTACAGAAATGTAGGGAAAGG 58.884 44.000 0.00 0.00 0.00 3.11
2703 2847 5.586643 GCCTCTTACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
2704 2848 5.250774 AGCCTCTTACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
2705 2849 4.783227 AGCCTCTTACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
2706 2850 4.162320 CAGCCTCTTACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
2707 2851 4.080863 ACAGCCTCTTACAGAAATGTAGGG 60.081 45.833 0.00 0.66 0.00 3.53
2708 2852 5.091261 ACAGCCTCTTACAGAAATGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
2709 2853 6.092807 GGAAACAGCCTCTTACAGAAATGTAG 59.907 42.308 0.00 0.00 0.00 2.74
2710 2854 5.938125 GGAAACAGCCTCTTACAGAAATGTA 59.062 40.000 0.00 0.00 0.00 2.29
2711 2855 4.762251 GGAAACAGCCTCTTACAGAAATGT 59.238 41.667 0.00 0.00 0.00 2.71
2712 2856 4.761739 TGGAAACAGCCTCTTACAGAAATG 59.238 41.667 0.00 0.00 35.01 2.32
2713 2857 4.985538 TGGAAACAGCCTCTTACAGAAAT 58.014 39.130 0.00 0.00 35.01 2.17
2714 2858 4.431416 TGGAAACAGCCTCTTACAGAAA 57.569 40.909 0.00 0.00 35.01 2.52
2728 2872 1.566703 TGGGTTCAAGTCCTGGAAACA 59.433 47.619 0.00 0.00 32.36 2.83
2729 2873 2.358322 TGGGTTCAAGTCCTGGAAAC 57.642 50.000 0.00 0.00 0.00 2.78
2730 2874 2.445145 TCATGGGTTCAAGTCCTGGAAA 59.555 45.455 0.00 0.00 0.00 3.13
2731 2875 2.061848 TCATGGGTTCAAGTCCTGGAA 58.938 47.619 0.00 0.00 0.00 3.53
2732 2876 1.351017 GTCATGGGTTCAAGTCCTGGA 59.649 52.381 0.00 0.00 0.00 3.86
2733 2877 1.614317 GGTCATGGGTTCAAGTCCTGG 60.614 57.143 0.00 0.00 0.00 4.45
2734 2878 1.352352 AGGTCATGGGTTCAAGTCCTG 59.648 52.381 0.00 0.00 0.00 3.86
2735 2879 1.630878 GAGGTCATGGGTTCAAGTCCT 59.369 52.381 0.00 0.00 0.00 3.85
2736 2880 1.351017 TGAGGTCATGGGTTCAAGTCC 59.649 52.381 0.00 0.00 0.00 3.85
2737 2881 2.859165 TGAGGTCATGGGTTCAAGTC 57.141 50.000 0.00 0.00 0.00 3.01
2752 2896 1.310933 GCTGCCTTGTGACCATGAGG 61.311 60.000 0.00 0.00 42.21 3.86
2753 2897 0.607217 TGCTGCCTTGTGACCATGAG 60.607 55.000 0.00 0.00 0.00 2.90
2754 2898 0.607217 CTGCTGCCTTGTGACCATGA 60.607 55.000 0.00 0.00 0.00 3.07
2755 2899 1.880894 CTGCTGCCTTGTGACCATG 59.119 57.895 0.00 0.00 0.00 3.66
2756 2900 1.975407 GCTGCTGCCTTGTGACCAT 60.975 57.895 3.85 0.00 0.00 3.55
2757 2901 2.595463 GCTGCTGCCTTGTGACCA 60.595 61.111 3.85 0.00 0.00 4.02
2758 2902 1.458639 AAAGCTGCTGCCTTGTGACC 61.459 55.000 12.44 0.00 40.80 4.02
2759 2903 1.068954 GTAAAGCTGCTGCCTTGTGAC 60.069 52.381 12.44 0.00 40.80 3.67
2760 2904 1.238439 GTAAAGCTGCTGCCTTGTGA 58.762 50.000 12.44 0.00 40.80 3.58
2761 2905 0.242017 GGTAAAGCTGCTGCCTTGTG 59.758 55.000 12.44 0.00 40.80 3.33
2762 2906 0.178992 TGGTAAAGCTGCTGCCTTGT 60.179 50.000 12.44 0.00 40.80 3.16
2763 2907 0.242017 GTGGTAAAGCTGCTGCCTTG 59.758 55.000 12.44 0.00 40.80 3.61
2764 2908 0.111253 AGTGGTAAAGCTGCTGCCTT 59.889 50.000 12.44 8.34 40.80 4.35
2765 2909 0.607489 CAGTGGTAAAGCTGCTGCCT 60.607 55.000 12.44 2.45 40.80 4.75
2766 2910 1.878775 CAGTGGTAAAGCTGCTGCC 59.121 57.895 12.44 7.07 40.80 4.85
2771 2915 1.514678 TTGGCGCAGTGGTAAAGCTG 61.515 55.000 10.83 0.00 35.93 4.24
2772 2916 1.228124 TTGGCGCAGTGGTAAAGCT 60.228 52.632 10.83 0.00 0.00 3.74
2773 2917 1.210155 CTTGGCGCAGTGGTAAAGC 59.790 57.895 10.83 0.00 0.00 3.51
2774 2918 1.875963 CCTTGGCGCAGTGGTAAAG 59.124 57.895 10.83 0.71 0.00 1.85
2775 2919 2.265182 GCCTTGGCGCAGTGGTAAA 61.265 57.895 10.83 0.00 0.00 2.01
2776 2920 2.671619 GCCTTGGCGCAGTGGTAA 60.672 61.111 10.83 0.00 0.00 2.85
2777 2921 3.605749 GAGCCTTGGCGCAGTGGTA 62.606 63.158 10.83 0.00 0.00 3.25
2785 2929 2.843912 ATTGAAGGGGAGCCTTGGCG 62.844 60.000 5.95 0.00 0.00 5.69
2786 2930 0.258774 TATTGAAGGGGAGCCTTGGC 59.741 55.000 2.97 2.97 0.00 4.52
2787 2931 2.961062 CAATATTGAAGGGGAGCCTTGG 59.039 50.000 10.04 0.00 0.00 3.61
2788 2932 3.635591 ACAATATTGAAGGGGAGCCTTG 58.364 45.455 22.16 0.00 0.00 3.61
2789 2933 4.337264 AACAATATTGAAGGGGAGCCTT 57.663 40.909 22.16 0.00 0.00 4.35
2790 2934 4.337264 AAACAATATTGAAGGGGAGCCT 57.663 40.909 22.16 0.00 0.00 4.58
2791 2935 5.201243 AGTAAACAATATTGAAGGGGAGCC 58.799 41.667 22.16 0.60 0.00 4.70
2792 2936 5.299531 GGAGTAAACAATATTGAAGGGGAGC 59.700 44.000 22.16 4.38 0.00 4.70
2793 2937 5.828328 GGGAGTAAACAATATTGAAGGGGAG 59.172 44.000 22.16 0.00 0.00 4.30
2794 2938 5.254267 TGGGAGTAAACAATATTGAAGGGGA 59.746 40.000 22.16 0.00 0.00 4.81
2795 2939 5.515106 TGGGAGTAAACAATATTGAAGGGG 58.485 41.667 22.16 0.00 0.00 4.79
2796 2940 7.475137 TTTGGGAGTAAACAATATTGAAGGG 57.525 36.000 22.16 0.00 0.00 3.95
2797 2941 9.369904 CATTTTGGGAGTAAACAATATTGAAGG 57.630 33.333 22.16 0.00 0.00 3.46
2798 2942 8.872845 GCATTTTGGGAGTAAACAATATTGAAG 58.127 33.333 22.16 0.00 0.00 3.02
2799 2943 8.370940 TGCATTTTGGGAGTAAACAATATTGAA 58.629 29.630 22.16 4.32 0.00 2.69
2864 3009 9.807649 CAAAGGGAAAGGTATAATTGAATCAAG 57.192 33.333 1.10 0.00 0.00 3.02
2867 3012 7.069950 AGGCAAAGGGAAAGGTATAATTGAATC 59.930 37.037 0.00 0.00 0.00 2.52
2869 3014 6.260663 AGGCAAAGGGAAAGGTATAATTGAA 58.739 36.000 0.00 0.00 0.00 2.69
2989 3134 2.029666 GAGGTCGCAGTGCACAGT 59.970 61.111 21.04 0.00 0.00 3.55
3167 3312 1.176527 ATGATTTGGGTTGTGAGCCG 58.823 50.000 0.00 0.00 46.65 5.52
3216 3361 3.992427 ACGATAAAAGAAGAACGTGGTCC 59.008 43.478 0.00 0.00 32.93 4.46
3223 3368 4.392138 CACTGGGGACGATAAAAGAAGAAC 59.608 45.833 0.00 0.00 0.00 3.01
3242 3388 4.488879 TCATTGAGTCGTCATTCTCACTG 58.511 43.478 0.00 0.00 39.87 3.66
3590 3736 2.426738 TGAGCAAAGTGTTTGACCCTTG 59.573 45.455 3.56 0.00 43.26 3.61
3810 3956 2.317900 TCCTAAGGGTCCTCAATCCTGA 59.682 50.000 0.00 0.00 0.00 3.86
3851 3997 2.554142 CAAGCGATGCTCATCCAACTA 58.446 47.619 4.45 0.00 38.25 2.24
4058 4204 3.827722 TCCGAGGAACAAAGGTCAAATT 58.172 40.909 0.00 0.00 0.00 1.82
4109 4337 1.134995 TGCAGGACGATGCTAGTGAAG 60.135 52.381 11.93 0.00 46.63 3.02
4110 4338 0.894835 TGCAGGACGATGCTAGTGAA 59.105 50.000 11.93 0.00 46.63 3.18
4111 4339 0.173481 GTGCAGGACGATGCTAGTGA 59.827 55.000 11.93 0.00 46.63 3.41
4112 4340 0.174389 AGTGCAGGACGATGCTAGTG 59.826 55.000 11.93 0.00 46.63 2.74
4113 4341 0.174389 CAGTGCAGGACGATGCTAGT 59.826 55.000 11.93 1.72 46.63 2.57
4114 4342 0.174389 ACAGTGCAGGACGATGCTAG 59.826 55.000 11.93 0.00 46.63 3.42
4115 4343 0.608130 AACAGTGCAGGACGATGCTA 59.392 50.000 11.93 0.00 46.63 3.49
4116 4344 0.250467 AAACAGTGCAGGACGATGCT 60.250 50.000 11.93 0.00 46.63 3.79
4117 4345 0.166814 GAAACAGTGCAGGACGATGC 59.833 55.000 0.00 0.00 46.68 3.91
4118 4346 1.462283 CTGAAACAGTGCAGGACGATG 59.538 52.381 0.00 0.00 0.00 3.84
4119 4347 1.344438 TCTGAAACAGTGCAGGACGAT 59.656 47.619 0.00 0.00 32.61 3.73
4120 4348 0.750249 TCTGAAACAGTGCAGGACGA 59.250 50.000 0.00 0.00 32.61 4.20
4121 4349 1.800805 ATCTGAAACAGTGCAGGACG 58.199 50.000 0.00 0.00 32.61 4.79
4122 4350 4.193826 TCTATCTGAAACAGTGCAGGAC 57.806 45.455 0.00 0.00 32.61 3.85
4123 4351 4.763073 CATCTATCTGAAACAGTGCAGGA 58.237 43.478 0.00 0.00 32.61 3.86
4124 4352 3.311871 GCATCTATCTGAAACAGTGCAGG 59.688 47.826 0.00 0.00 32.61 4.85
4125 4353 3.311871 GGCATCTATCTGAAACAGTGCAG 59.688 47.826 11.31 0.00 33.27 4.41
4126 4354 3.273434 GGCATCTATCTGAAACAGTGCA 58.727 45.455 11.31 0.00 33.27 4.57
4127 4355 2.615912 GGGCATCTATCTGAAACAGTGC 59.384 50.000 0.00 0.00 32.61 4.40
4128 4356 3.209410 GGGGCATCTATCTGAAACAGTG 58.791 50.000 0.00 0.00 32.61 3.66
4129 4357 2.173569 GGGGGCATCTATCTGAAACAGT 59.826 50.000 0.00 0.00 32.61 3.55
4130 4358 2.173356 TGGGGGCATCTATCTGAAACAG 59.827 50.000 0.00 0.00 0.00 3.16
4131 4359 2.204463 TGGGGGCATCTATCTGAAACA 58.796 47.619 0.00 0.00 0.00 2.83
4132 4360 2.952310 GTTGGGGGCATCTATCTGAAAC 59.048 50.000 0.00 0.00 0.00 2.78
4133 4361 2.580322 TGTTGGGGGCATCTATCTGAAA 59.420 45.455 0.00 0.00 0.00 2.69
4134 4362 2.092429 GTGTTGGGGGCATCTATCTGAA 60.092 50.000 0.00 0.00 0.00 3.02
4135 4363 1.490490 GTGTTGGGGGCATCTATCTGA 59.510 52.381 0.00 0.00 0.00 3.27
4136 4364 1.492176 AGTGTTGGGGGCATCTATCTG 59.508 52.381 0.00 0.00 0.00 2.90
4137 4365 1.771255 GAGTGTTGGGGGCATCTATCT 59.229 52.381 0.00 0.00 0.00 1.98
4138 4366 1.771255 AGAGTGTTGGGGGCATCTATC 59.229 52.381 0.00 0.00 0.00 2.08
4139 4367 1.771255 GAGAGTGTTGGGGGCATCTAT 59.229 52.381 0.00 0.00 0.00 1.98
4140 4368 1.204146 GAGAGTGTTGGGGGCATCTA 58.796 55.000 0.00 0.00 0.00 1.98
4141 4369 0.842030 TGAGAGTGTTGGGGGCATCT 60.842 55.000 0.00 0.00 0.00 2.90
4142 4370 0.393537 CTGAGAGTGTTGGGGGCATC 60.394 60.000 0.00 0.00 0.00 3.91
4143 4371 0.842030 TCTGAGAGTGTTGGGGGCAT 60.842 55.000 0.00 0.00 0.00 4.40
4144 4372 0.842030 ATCTGAGAGTGTTGGGGGCA 60.842 55.000 0.00 0.00 0.00 5.36
4145 4373 0.329596 AATCTGAGAGTGTTGGGGGC 59.670 55.000 0.00 0.00 0.00 5.80
4146 4374 1.065126 GGAATCTGAGAGTGTTGGGGG 60.065 57.143 0.00 0.00 0.00 5.40
4147 4375 1.065126 GGGAATCTGAGAGTGTTGGGG 60.065 57.143 0.00 0.00 0.00 4.96
4148 4376 1.630369 TGGGAATCTGAGAGTGTTGGG 59.370 52.381 0.00 0.00 0.00 4.12
4149 4377 3.077359 GTTGGGAATCTGAGAGTGTTGG 58.923 50.000 0.00 0.00 0.00 3.77
4150 4378 4.013267 AGTTGGGAATCTGAGAGTGTTG 57.987 45.455 0.00 0.00 0.00 3.33
4151 4379 5.825593 TTAGTTGGGAATCTGAGAGTGTT 57.174 39.130 0.00 0.00 0.00 3.32
4152 4380 5.513267 GGTTTAGTTGGGAATCTGAGAGTGT 60.513 44.000 0.00 0.00 0.00 3.55
4153 4381 4.938226 GGTTTAGTTGGGAATCTGAGAGTG 59.062 45.833 0.00 0.00 0.00 3.51
4154 4382 4.846940 AGGTTTAGTTGGGAATCTGAGAGT 59.153 41.667 0.00 0.00 0.00 3.24
4155 4383 5.181748 CAGGTTTAGTTGGGAATCTGAGAG 58.818 45.833 0.00 0.00 36.35 3.20
4156 4384 4.565652 GCAGGTTTAGTTGGGAATCTGAGA 60.566 45.833 0.85 0.00 36.35 3.27
4157 4385 3.691609 GCAGGTTTAGTTGGGAATCTGAG 59.308 47.826 0.85 0.00 36.35 3.35
4158 4386 3.561313 GGCAGGTTTAGTTGGGAATCTGA 60.561 47.826 0.85 0.00 36.35 3.27
4159 4387 2.755103 GGCAGGTTTAGTTGGGAATCTG 59.245 50.000 0.00 0.00 37.12 2.90
4160 4388 2.291605 GGGCAGGTTTAGTTGGGAATCT 60.292 50.000 0.00 0.00 0.00 2.40
4161 4389 2.100197 GGGCAGGTTTAGTTGGGAATC 58.900 52.381 0.00 0.00 0.00 2.52
4162 4390 1.273041 GGGGCAGGTTTAGTTGGGAAT 60.273 52.381 0.00 0.00 0.00 3.01
4163 4391 0.113580 GGGGCAGGTTTAGTTGGGAA 59.886 55.000 0.00 0.00 0.00 3.97
4164 4392 1.068943 TGGGGCAGGTTTAGTTGGGA 61.069 55.000 0.00 0.00 0.00 4.37
4165 4393 0.041090 ATGGGGCAGGTTTAGTTGGG 59.959 55.000 0.00 0.00 0.00 4.12
4166 4394 1.272425 TGATGGGGCAGGTTTAGTTGG 60.272 52.381 0.00 0.00 0.00 3.77
4167 4395 1.818674 GTGATGGGGCAGGTTTAGTTG 59.181 52.381 0.00 0.00 0.00 3.16
4168 4396 1.710809 AGTGATGGGGCAGGTTTAGTT 59.289 47.619 0.00 0.00 0.00 2.24
4169 4397 1.372501 AGTGATGGGGCAGGTTTAGT 58.627 50.000 0.00 0.00 0.00 2.24
4170 4398 3.480470 CATAGTGATGGGGCAGGTTTAG 58.520 50.000 0.00 0.00 0.00 1.85
4171 4399 2.422803 GCATAGTGATGGGGCAGGTTTA 60.423 50.000 0.00 0.00 33.26 2.01
4172 4400 1.686115 GCATAGTGATGGGGCAGGTTT 60.686 52.381 0.00 0.00 33.26 3.27
4173 4401 0.106519 GCATAGTGATGGGGCAGGTT 60.107 55.000 0.00 0.00 33.26 3.50
4174 4402 1.281199 TGCATAGTGATGGGGCAGGT 61.281 55.000 0.00 0.00 33.26 4.00
4175 4403 0.111832 ATGCATAGTGATGGGGCAGG 59.888 55.000 0.00 0.00 37.96 4.85
4176 4404 1.244816 CATGCATAGTGATGGGGCAG 58.755 55.000 0.00 0.00 37.96 4.85
4177 4405 0.552363 ACATGCATAGTGATGGGGCA 59.448 50.000 0.00 0.00 39.03 5.36
4178 4406 1.696063 AACATGCATAGTGATGGGGC 58.304 50.000 0.00 0.00 33.26 5.80
4179 4407 5.302568 ACAATAAACATGCATAGTGATGGGG 59.697 40.000 0.00 0.00 33.26 4.96
4180 4408 6.395426 ACAATAAACATGCATAGTGATGGG 57.605 37.500 0.00 0.00 33.26 4.00
4181 4409 9.970395 ATTTACAATAAACATGCATAGTGATGG 57.030 29.630 0.00 0.00 33.26 3.51
4224 4452 7.918033 ACTTCACATGTCTACTTAATCTGATCG 59.082 37.037 0.00 0.00 0.00 3.69
4372 4601 9.046296 CAAACACTTCAGAGTAAGACTAACAAT 57.954 33.333 0.00 0.00 33.90 2.71
4410 4639 5.570589 GCTTCAACTCACACTTGATTAATGC 59.429 40.000 0.00 0.00 0.00 3.56
4699 4932 7.013846 TCGAGGTTTGTCAAAATCAAAACCTAT 59.986 33.333 16.39 0.00 41.62 2.57
4760 4995 7.165485 TGTTAAAGCAGTGATACAACTACCAT 58.835 34.615 0.00 0.00 0.00 3.55
4761 4996 6.526526 TGTTAAAGCAGTGATACAACTACCA 58.473 36.000 0.00 0.00 0.00 3.25
4885 5120 5.703730 AATATTTGGGAACGAAGGGAGTA 57.296 39.130 0.00 0.00 37.08 2.59
4886 5121 4.586306 AATATTTGGGAACGAAGGGAGT 57.414 40.909 0.00 0.00 37.08 3.85
4887 5122 4.705023 ACAAATATTTGGGAACGAAGGGAG 59.295 41.667 27.43 2.64 42.34 4.30
4888 5123 4.668636 ACAAATATTTGGGAACGAAGGGA 58.331 39.130 27.43 0.00 42.34 4.20
4889 5124 4.705023 AGACAAATATTTGGGAACGAAGGG 59.295 41.667 27.43 3.22 42.34 3.95
4890 5125 5.897377 AGACAAATATTTGGGAACGAAGG 57.103 39.130 27.43 3.68 42.34 3.46
4891 5126 7.593825 AGAAAGACAAATATTTGGGAACGAAG 58.406 34.615 27.43 4.34 42.34 3.79
4892 5127 7.519032 AGAAAGACAAATATTTGGGAACGAA 57.481 32.000 27.43 0.00 42.34 3.85
4893 5128 8.098286 TCTAGAAAGACAAATATTTGGGAACGA 58.902 33.333 27.43 12.84 42.34 3.85
4894 5129 8.263940 TCTAGAAAGACAAATATTTGGGAACG 57.736 34.615 27.43 11.14 42.34 3.95
4895 5130 9.449719 TCTCTAGAAAGACAAATATTTGGGAAC 57.550 33.333 27.43 16.80 42.34 3.62
4906 5141 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
4907 5142 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
4908 5143 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
4909 5144 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
4910 5145 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
4911 5146 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
4912 5147 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
4913 5148 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
4914 5149 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
4915 5150 8.867935 CATGTAGTCACTTGTTGAAATCTCTAG 58.132 37.037 0.00 0.00 35.39 2.43
4916 5151 7.331934 GCATGTAGTCACTTGTTGAAATCTCTA 59.668 37.037 0.00 0.00 35.39 2.43
4917 5152 6.148480 GCATGTAGTCACTTGTTGAAATCTCT 59.852 38.462 0.00 0.00 35.39 3.10
4918 5153 6.310197 GCATGTAGTCACTTGTTGAAATCTC 58.690 40.000 0.00 0.00 35.39 2.75
4919 5154 5.106948 CGCATGTAGTCACTTGTTGAAATCT 60.107 40.000 0.00 0.00 35.39 2.40
4920 5155 5.082059 CGCATGTAGTCACTTGTTGAAATC 58.918 41.667 0.00 0.00 35.39 2.17
4921 5156 4.754618 TCGCATGTAGTCACTTGTTGAAAT 59.245 37.500 0.00 0.00 35.39 2.17
4922 5157 4.123506 TCGCATGTAGTCACTTGTTGAAA 58.876 39.130 0.00 0.00 35.39 2.69
4923 5158 3.723260 TCGCATGTAGTCACTTGTTGAA 58.277 40.909 0.00 0.00 35.39 2.69
4924 5159 3.378911 TCGCATGTAGTCACTTGTTGA 57.621 42.857 0.00 0.00 33.46 3.18
4925 5160 3.665323 GCTTCGCATGTAGTCACTTGTTG 60.665 47.826 0.00 0.00 33.46 3.33
4926 5161 2.480419 GCTTCGCATGTAGTCACTTGTT 59.520 45.455 0.00 0.00 33.46 2.83
4927 5162 2.069273 GCTTCGCATGTAGTCACTTGT 58.931 47.619 0.00 0.00 33.46 3.16
4928 5163 2.068519 TGCTTCGCATGTAGTCACTTG 58.931 47.619 0.00 0.00 31.71 3.16
4929 5164 2.455674 TGCTTCGCATGTAGTCACTT 57.544 45.000 0.00 0.00 31.71 3.16
4930 5165 2.455674 TTGCTTCGCATGTAGTCACT 57.544 45.000 0.00 0.00 38.76 3.41
4931 5166 3.536158 TTTTGCTTCGCATGTAGTCAC 57.464 42.857 0.00 0.00 38.76 3.67
4932 5167 5.411361 ACTTATTTTGCTTCGCATGTAGTCA 59.589 36.000 0.00 0.00 38.76 3.41
4933 5168 5.734498 CACTTATTTTGCTTCGCATGTAGTC 59.266 40.000 0.00 0.00 38.76 2.59
4934 5169 5.411361 TCACTTATTTTGCTTCGCATGTAGT 59.589 36.000 0.00 0.00 38.76 2.73
4935 5170 5.868257 TCACTTATTTTGCTTCGCATGTAG 58.132 37.500 0.00 0.00 38.76 2.74
4936 5171 5.871465 TCACTTATTTTGCTTCGCATGTA 57.129 34.783 0.00 0.00 38.76 2.29
4937 5172 4.764679 TCACTTATTTTGCTTCGCATGT 57.235 36.364 0.00 0.00 38.76 3.21
4938 5173 6.032094 AGATTCACTTATTTTGCTTCGCATG 58.968 36.000 0.00 0.00 38.76 4.06
4939 5174 6.199937 AGATTCACTTATTTTGCTTCGCAT 57.800 33.333 0.00 0.00 38.76 4.73
4940 5175 5.627499 AGATTCACTTATTTTGCTTCGCA 57.373 34.783 0.00 0.00 36.47 5.10
4941 5176 6.466097 GTGTAGATTCACTTATTTTGCTTCGC 59.534 38.462 0.00 0.00 35.68 4.70
4942 5177 7.743104 AGTGTAGATTCACTTATTTTGCTTCG 58.257 34.615 0.00 0.00 44.92 3.79
4943 5178 8.940952 AGAGTGTAGATTCACTTATTTTGCTTC 58.059 33.333 0.98 0.00 46.81 3.86
4944 5179 8.854614 AGAGTGTAGATTCACTTATTTTGCTT 57.145 30.769 0.98 0.00 46.81 3.91
4945 5180 9.944376 TTAGAGTGTAGATTCACTTATTTTGCT 57.056 29.630 0.98 0.00 46.81 3.91
4976 5211 9.143155 ACTACAACATATGGATGTATGTAGACA 57.857 33.333 26.03 7.65 45.93 3.41
4977 5212 9.627395 GACTACAACATATGGATGTATGTAGAC 57.373 37.037 26.03 21.22 45.93 2.59
4978 5213 8.803235 GGACTACAACATATGGATGTATGTAGA 58.197 37.037 26.03 8.59 45.93 2.59
4979 5214 8.585018 TGGACTACAACATATGGATGTATGTAG 58.415 37.037 22.20 22.20 45.93 2.74
4980 5215 8.485578 TGGACTACAACATATGGATGTATGTA 57.514 34.615 18.38 11.27 45.93 2.29
4981 5216 7.373617 TGGACTACAACATATGGATGTATGT 57.626 36.000 18.38 17.31 45.93 2.29
4982 5217 8.853077 AATGGACTACAACATATGGATGTATG 57.147 34.615 18.38 15.31 45.93 2.39
5015 5250 7.335924 CCGTTCCCAAATATTTGTCTTTCTAGA 59.664 37.037 23.24 7.17 36.45 2.43
5016 5251 7.335924 TCCGTTCCCAAATATTTGTCTTTCTAG 59.664 37.037 23.24 8.23 36.45 2.43
5017 5252 7.169591 TCCGTTCCCAAATATTTGTCTTTCTA 58.830 34.615 23.24 5.03 36.45 2.10
5018 5253 6.007703 TCCGTTCCCAAATATTTGTCTTTCT 58.992 36.000 23.24 0.00 36.45 2.52
5019 5254 6.262193 TCCGTTCCCAAATATTTGTCTTTC 57.738 37.500 23.24 10.84 36.45 2.62
5020 5255 5.185056 CCTCCGTTCCCAAATATTTGTCTTT 59.815 40.000 23.24 0.00 36.45 2.52
5021 5256 4.705023 CCTCCGTTCCCAAATATTTGTCTT 59.295 41.667 23.24 0.00 36.45 3.01
5022 5257 4.270008 CCTCCGTTCCCAAATATTTGTCT 58.730 43.478 23.24 0.00 36.45 3.41
5023 5258 3.380320 CCCTCCGTTCCCAAATATTTGTC 59.620 47.826 23.24 11.68 36.45 3.18
5024 5259 3.010808 TCCCTCCGTTCCCAAATATTTGT 59.989 43.478 23.24 0.00 36.45 2.83
5025 5260 3.626930 TCCCTCCGTTCCCAAATATTTG 58.373 45.455 19.40 19.40 37.90 2.32
5026 5261 3.268595 ACTCCCTCCGTTCCCAAATATTT 59.731 43.478 0.00 0.00 0.00 1.40
5027 5262 2.850568 ACTCCCTCCGTTCCCAAATATT 59.149 45.455 0.00 0.00 0.00 1.28
5028 5263 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
5029 5264 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
5030 5265 1.838077 CTACTCCCTCCGTTCCCAAAT 59.162 52.381 0.00 0.00 0.00 2.32
5031 5266 1.272807 CTACTCCCTCCGTTCCCAAA 58.727 55.000 0.00 0.00 0.00 3.28
5032 5267 0.115745 ACTACTCCCTCCGTTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
5033 5268 0.115745 AACTACTCCCTCCGTTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
5034 5269 1.206610 GAAACTACTCCCTCCGTTCCC 59.793 57.143 0.00 0.00 0.00 3.97
5035 5270 1.206610 GGAAACTACTCCCTCCGTTCC 59.793 57.143 0.00 0.00 0.00 3.62
5036 5271 1.897802 TGGAAACTACTCCCTCCGTTC 59.102 52.381 0.00 0.00 34.22 3.95
5037 5272 1.900486 CTGGAAACTACTCCCTCCGTT 59.100 52.381 0.00 0.00 34.22 4.44
5038 5273 1.203149 ACTGGAAACTACTCCCTCCGT 60.203 52.381 0.00 0.00 34.22 4.69
5039 5274 1.204941 CACTGGAAACTACTCCCTCCG 59.795 57.143 0.00 0.00 34.22 4.63
5040 5275 1.066071 GCACTGGAAACTACTCCCTCC 60.066 57.143 0.00 0.00 34.22 4.30
5041 5276 1.623811 TGCACTGGAAACTACTCCCTC 59.376 52.381 0.00 0.00 34.22 4.30
5042 5277 1.729586 TGCACTGGAAACTACTCCCT 58.270 50.000 0.00 0.00 34.22 4.20
5043 5278 2.290323 ACATGCACTGGAAACTACTCCC 60.290 50.000 0.00 0.00 34.22 4.30
5044 5279 3.003480 GACATGCACTGGAAACTACTCC 58.997 50.000 0.00 0.00 35.88 3.85
5045 5280 3.931578 AGACATGCACTGGAAACTACTC 58.068 45.455 0.00 0.00 0.00 2.59
5046 5281 4.618460 CGTAGACATGCACTGGAAACTACT 60.618 45.833 0.00 0.00 0.00 2.57
5047 5282 3.612860 CGTAGACATGCACTGGAAACTAC 59.387 47.826 0.00 0.00 0.00 2.73
5068 5303 5.048507 GGTTAACTAACATAGAAGAGGGCG 58.951 45.833 5.42 0.00 37.92 6.13
5202 5439 2.486191 CCACAGATTATCAGGAGCCCAC 60.486 54.545 0.00 0.00 0.00 4.61
5203 5440 1.770658 CCACAGATTATCAGGAGCCCA 59.229 52.381 0.00 0.00 0.00 5.36
5204 5441 1.072965 CCCACAGATTATCAGGAGCCC 59.927 57.143 0.00 0.00 0.00 5.19
5205 5442 1.544314 GCCCACAGATTATCAGGAGCC 60.544 57.143 0.00 0.00 0.00 4.70
5206 5443 1.419387 AGCCCACAGATTATCAGGAGC 59.581 52.381 0.00 0.59 0.00 4.70
5207 5444 2.038295 GGAGCCCACAGATTATCAGGAG 59.962 54.545 0.00 0.00 0.00 3.69
5208 5445 2.050144 GGAGCCCACAGATTATCAGGA 58.950 52.381 0.00 0.00 0.00 3.86
5209 5446 2.053244 AGGAGCCCACAGATTATCAGG 58.947 52.381 0.00 0.00 0.00 3.86
5210 5447 2.702478 TCAGGAGCCCACAGATTATCAG 59.298 50.000 0.00 0.00 0.00 2.90
5211 5448 2.763039 TCAGGAGCCCACAGATTATCA 58.237 47.619 0.00 0.00 0.00 2.15
5212 5449 4.622695 GCTATCAGGAGCCCACAGATTATC 60.623 50.000 0.00 0.00 36.38 1.75
5213 5450 3.262915 GCTATCAGGAGCCCACAGATTAT 59.737 47.826 0.00 0.00 36.38 1.28
5214 5451 2.634940 GCTATCAGGAGCCCACAGATTA 59.365 50.000 0.00 0.00 36.38 1.75
5215 5452 1.419387 GCTATCAGGAGCCCACAGATT 59.581 52.381 0.00 0.00 36.38 2.40
5216 5453 1.055040 GCTATCAGGAGCCCACAGAT 58.945 55.000 0.00 0.00 36.38 2.90
5217 5454 0.325577 TGCTATCAGGAGCCCACAGA 60.326 55.000 0.00 0.00 42.11 3.41
5218 5455 0.179062 GTGCTATCAGGAGCCCACAG 60.179 60.000 0.00 0.00 42.11 3.66
5219 5456 0.909133 TGTGCTATCAGGAGCCCACA 60.909 55.000 0.00 0.00 42.11 4.17
5376 5613 3.718434 AGAACTGATAATCTGGATGGCCA 59.282 43.478 8.56 8.56 43.47 5.36
5503 5740 2.868583 CAGTCAACCAGTCAGTCACTTG 59.131 50.000 0.00 0.00 30.26 3.16
5504 5741 2.743183 GCAGTCAACCAGTCAGTCACTT 60.743 50.000 0.00 0.00 30.26 3.16
5621 5858 8.416485 ACTACAAGTATAAAAACATAGACGGC 57.584 34.615 0.00 0.00 0.00 5.68
5737 5974 3.578282 TGGACAGCTCAAACTACATCTGA 59.422 43.478 0.00 0.00 0.00 3.27
5738 5975 3.930336 TGGACAGCTCAAACTACATCTG 58.070 45.455 0.00 0.00 0.00 2.90
5739 5976 4.040952 AGTTGGACAGCTCAAACTACATCT 59.959 41.667 0.00 0.00 0.00 2.90
5740 5977 4.319177 AGTTGGACAGCTCAAACTACATC 58.681 43.478 0.00 0.00 0.00 3.06
5741 5978 4.357918 AGTTGGACAGCTCAAACTACAT 57.642 40.909 0.00 0.00 0.00 2.29
5742 5979 3.838244 AGTTGGACAGCTCAAACTACA 57.162 42.857 0.00 0.00 0.00 2.74
5743 5980 5.701290 ACATAAGTTGGACAGCTCAAACTAC 59.299 40.000 0.00 0.00 0.00 2.73
5744 5981 5.865085 ACATAAGTTGGACAGCTCAAACTA 58.135 37.500 0.00 0.00 0.00 2.24
5745 5982 4.718961 ACATAAGTTGGACAGCTCAAACT 58.281 39.130 0.00 0.00 0.00 2.66
5746 5983 6.554334 TTACATAAGTTGGACAGCTCAAAC 57.446 37.500 0.00 0.00 0.00 2.93
5747 5984 7.880713 TGTATTACATAAGTTGGACAGCTCAAA 59.119 33.333 0.00 0.00 0.00 2.69
5748 5985 7.390823 TGTATTACATAAGTTGGACAGCTCAA 58.609 34.615 0.00 0.00 0.00 3.02
5749 5986 6.941857 TGTATTACATAAGTTGGACAGCTCA 58.058 36.000 0.00 0.00 0.00 4.26
5750 5987 7.843490 TTGTATTACATAAGTTGGACAGCTC 57.157 36.000 0.00 0.00 0.00 4.09
5751 5988 8.807948 ATTTGTATTACATAAGTTGGACAGCT 57.192 30.769 0.00 0.00 0.00 4.24
5936 6202 3.107601 AGCATGCTAACTACTTCCTCCA 58.892 45.455 21.21 0.00 0.00 3.86
5942 6208 6.045318 CACTATGACAGCATGCTAACTACTT 58.955 40.000 22.19 10.31 42.53 2.24
5956 6224 5.571741 CAGGTTTACACGTACACTATGACAG 59.428 44.000 0.00 0.00 0.00 3.51
5970 6238 2.943033 ACAGCAGTTCACAGGTTTACAC 59.057 45.455 0.00 0.00 0.00 2.90
6041 6309 7.361127 TGAACTTAGCTTACATAGATACTCGC 58.639 38.462 0.00 0.00 0.00 5.03
6183 6572 5.449041 GCTCATGCTTGGATACGAATTTTCA 60.449 40.000 0.00 0.00 36.02 2.69
6255 6934 7.172875 GGAATACTGAAGCTATACTAGACACGA 59.827 40.741 0.00 0.00 0.00 4.35
6289 6968 0.174845 GTGGTGCGGCATACTCACTA 59.825 55.000 5.72 0.00 0.00 2.74
6302 6981 1.608590 AGTGCAGTTATTGTGTGGTGC 59.391 47.619 0.00 0.00 0.00 5.01
6318 6997 5.008019 CCAATCAATAGTGTGGTATCAGTGC 59.992 44.000 0.00 0.00 0.00 4.40
6406 7085 3.963383 ATTTAATAGAAACTGCCGCGG 57.037 42.857 24.05 24.05 0.00 6.46
6440 7119 9.394767 TGTACTACGTCTAGTCCAATACAATAA 57.605 33.333 0.00 0.00 34.79 1.40
6441 7120 8.962884 TGTACTACGTCTAGTCCAATACAATA 57.037 34.615 0.00 0.00 34.79 1.90
6442 7121 7.870509 TGTACTACGTCTAGTCCAATACAAT 57.129 36.000 0.00 0.00 34.79 2.71
6443 7122 7.870509 ATGTACTACGTCTAGTCCAATACAA 57.129 36.000 0.00 0.00 34.79 2.41
6444 7123 7.169813 CGTATGTACTACGTCTAGTCCAATACA 59.830 40.741 13.41 0.00 46.46 2.29
6445 7124 7.505646 CGTATGTACTACGTCTAGTCCAATAC 58.494 42.308 13.41 0.32 46.46 1.89
6446 7125 7.643528 CGTATGTACTACGTCTAGTCCAATA 57.356 40.000 13.41 0.00 46.46 1.90
6447 7126 6.536731 CGTATGTACTACGTCTAGTCCAAT 57.463 41.667 13.41 0.00 46.46 3.16
6448 7127 5.973651 CGTATGTACTACGTCTAGTCCAA 57.026 43.478 13.41 0.00 46.46 3.53
6459 7138 1.202452 GGCCCACACCGTATGTACTAC 60.202 57.143 0.00 0.00 40.64 2.73
6460 7139 1.113788 GGCCCACACCGTATGTACTA 58.886 55.000 0.00 0.00 40.64 1.82
6461 7140 0.616679 AGGCCCACACCGTATGTACT 60.617 55.000 0.00 0.00 40.64 2.73
6462 7141 0.251073 AAGGCCCACACCGTATGTAC 59.749 55.000 0.00 0.00 40.64 2.90
6463 7142 0.985760 AAAGGCCCACACCGTATGTA 59.014 50.000 0.00 0.00 40.64 2.29
6464 7143 0.608035 CAAAGGCCCACACCGTATGT 60.608 55.000 0.00 0.00 44.81 2.29
6465 7144 1.933115 GCAAAGGCCCACACCGTATG 61.933 60.000 0.00 0.00 33.69 2.39
6466 7145 1.677633 GCAAAGGCCCACACCGTAT 60.678 57.895 0.00 0.00 33.69 3.06
6467 7146 2.281900 GCAAAGGCCCACACCGTA 60.282 61.111 0.00 0.00 33.69 4.02
6470 7149 3.223589 AACGCAAAGGCCCACACC 61.224 61.111 0.00 0.00 36.38 4.16
6471 7150 2.027460 CAACGCAAAGGCCCACAC 59.973 61.111 0.00 0.00 36.38 3.82
6472 7151 2.626255 TACCAACGCAAAGGCCCACA 62.626 55.000 0.00 0.00 36.38 4.17
6473 7152 1.899534 TACCAACGCAAAGGCCCAC 60.900 57.895 0.00 0.00 36.38 4.61
6474 7153 1.899534 GTACCAACGCAAAGGCCCA 60.900 57.895 0.00 0.00 36.38 5.36
6475 7154 2.632544 GGTACCAACGCAAAGGCCC 61.633 63.158 7.15 0.00 36.38 5.80
6476 7155 2.959372 GGTACCAACGCAAAGGCC 59.041 61.111 7.15 0.00 36.38 5.19
6477 7156 1.962306 TCGGTACCAACGCAAAGGC 60.962 57.895 13.54 0.00 0.00 4.35
6478 7157 1.864176 GTCGGTACCAACGCAAAGG 59.136 57.895 13.54 0.00 0.00 3.11
6479 7158 1.216941 ACGTCGGTACCAACGCAAAG 61.217 55.000 24.92 0.00 42.47 2.77
6480 7159 1.227205 ACGTCGGTACCAACGCAAA 60.227 52.632 24.92 0.00 42.47 3.68
6481 7160 1.950130 CACGTCGGTACCAACGCAA 60.950 57.895 24.92 0.00 42.47 4.85
6482 7161 1.790090 TACACGTCGGTACCAACGCA 61.790 55.000 24.92 8.02 42.47 5.24
6483 7162 0.456653 ATACACGTCGGTACCAACGC 60.457 55.000 24.92 3.74 42.47 4.84
6484 7163 1.135717 TCATACACGTCGGTACCAACG 60.136 52.381 23.50 23.50 44.22 4.10
6485 7164 2.634982 TCATACACGTCGGTACCAAC 57.365 50.000 13.54 1.92 0.00 3.77
6486 7165 3.872511 AATCATACACGTCGGTACCAA 57.127 42.857 13.54 0.00 0.00 3.67
6487 7166 6.262944 AGTTATAATCATACACGTCGGTACCA 59.737 38.462 13.54 0.00 0.00 3.25
6488 7167 6.672147 AGTTATAATCATACACGTCGGTACC 58.328 40.000 0.16 0.16 0.00 3.34
6489 7168 7.645340 ACAAGTTATAATCATACACGTCGGTAC 59.355 37.037 0.00 0.00 0.00 3.34
6490 7169 7.706159 ACAAGTTATAATCATACACGTCGGTA 58.294 34.615 0.00 0.00 0.00 4.02
6491 7170 6.567050 ACAAGTTATAATCATACACGTCGGT 58.433 36.000 0.00 0.00 0.00 4.69
6492 7171 7.459394 AACAAGTTATAATCATACACGTCGG 57.541 36.000 0.00 0.00 0.00 4.79
6493 7172 9.825391 GTAAACAAGTTATAATCATACACGTCG 57.175 33.333 0.00 0.00 0.00 5.12
6523 7202 6.377146 GGCAATACATAAAAGTCCTTGAAGGA 59.623 38.462 10.46 10.46 43.43 3.36
6524 7203 6.405842 GGGCAATACATAAAAGTCCTTGAAGG 60.406 42.308 4.45 4.45 36.46 3.46
6525 7204 6.378280 AGGGCAATACATAAAAGTCCTTGAAG 59.622 38.462 0.00 0.00 0.00 3.02
6526 7205 6.252995 AGGGCAATACATAAAAGTCCTTGAA 58.747 36.000 0.00 0.00 0.00 2.69
6527 7206 5.826643 AGGGCAATACATAAAAGTCCTTGA 58.173 37.500 0.00 0.00 0.00 3.02
6528 7207 5.652014 TGAGGGCAATACATAAAAGTCCTTG 59.348 40.000 0.00 0.00 0.00 3.61
6529 7208 5.826643 TGAGGGCAATACATAAAAGTCCTT 58.173 37.500 0.00 0.00 0.00 3.36
6530 7209 5.450818 TGAGGGCAATACATAAAAGTCCT 57.549 39.130 0.00 0.00 0.00 3.85
6531 7210 7.448469 ACATATGAGGGCAATACATAAAAGTCC 59.552 37.037 10.38 0.00 31.75 3.85
6532 7211 8.396272 ACATATGAGGGCAATACATAAAAGTC 57.604 34.615 10.38 0.00 31.75 3.01
6533 7212 9.284968 GTACATATGAGGGCAATACATAAAAGT 57.715 33.333 10.38 0.00 31.75 2.66
6534 7213 8.730680 GGTACATATGAGGGCAATACATAAAAG 58.269 37.037 10.38 0.00 31.75 2.27
6535 7214 7.668052 GGGTACATATGAGGGCAATACATAAAA 59.332 37.037 10.38 0.00 31.75 1.52
6536 7215 7.172342 GGGTACATATGAGGGCAATACATAAA 58.828 38.462 10.38 0.00 31.75 1.40
6537 7216 6.296778 GGGGTACATATGAGGGCAATACATAA 60.297 42.308 10.38 0.00 31.75 1.90
6538 7217 5.190925 GGGGTACATATGAGGGCAATACATA 59.809 44.000 10.38 0.00 0.00 2.29
6539 7218 4.018415 GGGGTACATATGAGGGCAATACAT 60.018 45.833 10.38 0.00 0.00 2.29
6540 7219 3.329520 GGGGTACATATGAGGGCAATACA 59.670 47.826 10.38 0.00 0.00 2.29
6541 7220 3.329520 TGGGGTACATATGAGGGCAATAC 59.670 47.826 10.38 0.00 0.00 1.89
6542 7221 3.603697 TGGGGTACATATGAGGGCAATA 58.396 45.455 10.38 0.00 0.00 1.90
6543 7222 2.427872 TGGGGTACATATGAGGGCAAT 58.572 47.619 10.38 0.00 0.00 3.56
6544 7223 1.900254 TGGGGTACATATGAGGGCAA 58.100 50.000 10.38 0.00 0.00 4.52
6545 7224 2.132303 ATGGGGTACATATGAGGGCA 57.868 50.000 10.38 0.00 38.26 5.36
6553 7232 3.441222 CGTGCGACTATATGGGGTACATA 59.559 47.826 0.00 0.00 45.60 2.29
6554 7233 2.230508 CGTGCGACTATATGGGGTACAT 59.769 50.000 0.00 0.00 43.68 2.29
6555 7234 1.610038 CGTGCGACTATATGGGGTACA 59.390 52.381 0.00 0.00 0.00 2.90
6556 7235 1.610522 ACGTGCGACTATATGGGGTAC 59.389 52.381 0.00 0.00 0.00 3.34
6557 7236 1.985473 ACGTGCGACTATATGGGGTA 58.015 50.000 0.00 0.00 0.00 3.69
6558 7237 1.985473 TACGTGCGACTATATGGGGT 58.015 50.000 0.00 0.00 0.00 4.95
6559 7238 3.005050 TCTTTACGTGCGACTATATGGGG 59.995 47.826 0.00 0.00 0.00 4.96
6560 7239 3.979495 GTCTTTACGTGCGACTATATGGG 59.021 47.826 0.00 0.00 0.00 4.00
6561 7240 3.662645 CGTCTTTACGTGCGACTATATGG 59.337 47.826 0.00 0.00 44.21 2.74
6562 7241 4.846218 CGTCTTTACGTGCGACTATATG 57.154 45.455 0.00 0.00 44.21 1.78
6583 7262 0.710567 CAAGCACGAGACGACACATC 59.289 55.000 0.00 0.00 0.00 3.06
6584 7263 0.032130 ACAAGCACGAGACGACACAT 59.968 50.000 0.00 0.00 0.00 3.21
6585 7264 0.664224 TACAAGCACGAGACGACACA 59.336 50.000 0.00 0.00 0.00 3.72
6586 7265 1.762419 TTACAAGCACGAGACGACAC 58.238 50.000 0.00 0.00 0.00 3.67
6587 7266 2.717580 ATTACAAGCACGAGACGACA 57.282 45.000 0.00 0.00 0.00 4.35
6588 7267 3.756069 AGTATTACAAGCACGAGACGAC 58.244 45.455 0.00 0.00 0.00 4.34
6589 7268 5.550232 TTAGTATTACAAGCACGAGACGA 57.450 39.130 0.00 0.00 0.00 4.20
6590 7269 7.536225 CTATTAGTATTACAAGCACGAGACG 57.464 40.000 0.00 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.