Multiple sequence alignment - TraesCS3A01G193000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G193000 chr3A 100.000 2489 0 0 1 2489 259837202 259839690 0.000000e+00 4597.0
1 TraesCS3A01G193000 chr3A 95.919 1985 55 1 521 2479 451665428 451663444 0.000000e+00 3193.0
2 TraesCS3A01G193000 chr3A 95.707 1980 59 2 526 2479 451657602 451659581 0.000000e+00 3162.0
3 TraesCS3A01G193000 chr3A 89.062 192 15 6 298 484 481263393 481263583 1.490000e-57 233.0
4 TraesCS3A01G193000 chr3A 84.038 213 29 3 2136 2347 631283728 631283520 1.510000e-47 200.0
5 TraesCS3A01G193000 chr3B 95.896 1998 53 3 521 2489 703847543 703849540 0.000000e+00 3208.0
6 TraesCS3A01G193000 chr3B 81.714 700 88 18 1457 2125 650604231 650603541 4.680000e-152 547.0
7 TraesCS3A01G193000 chr3B 88.830 188 20 1 521 708 17323451 17323265 1.930000e-56 230.0
8 TraesCS3A01G193000 chr3B 82.727 220 28 9 2126 2343 650603620 650603409 1.180000e-43 187.0
9 TraesCS3A01G193000 chr3B 98.780 82 1 0 2126 2207 703849068 703849149 1.990000e-31 147.0
10 TraesCS3A01G193000 chr3B 89.091 55 6 0 2433 2487 514594015 514594069 4.440000e-08 69.4
11 TraesCS3A01G193000 chr4A 90.436 1652 102 21 520 2125 703410862 703412503 0.000000e+00 2124.0
12 TraesCS3A01G193000 chr4A 87.692 390 17 15 2126 2487 703412425 703412811 2.290000e-115 425.0
13 TraesCS3A01G193000 chr4A 90.556 180 12 4 298 474 151135006 151134829 1.490000e-57 233.0
14 TraesCS3A01G193000 chr5A 96.579 1140 38 1 521 1660 525733057 525734195 0.000000e+00 1888.0
15 TraesCS3A01G193000 chr5A 94.220 865 24 1 1651 2489 525734619 525735483 0.000000e+00 1297.0
16 TraesCS3A01G193000 chr5A 90.000 180 13 4 298 474 117925460 117925283 6.930000e-56 228.0
17 TraesCS3A01G193000 chr5A 88.770 187 16 4 298 481 232176890 232176706 8.960000e-55 224.0
18 TraesCS3A01G193000 chr5A 97.531 81 2 0 2126 2206 525735012 525735092 3.340000e-29 139.0
19 TraesCS3A01G193000 chr2A 86.145 498 39 5 942 1412 156666924 156667418 6.140000e-141 510.0
20 TraesCS3A01G193000 chr2A 90.000 180 13 4 298 474 185141584 185141407 6.930000e-56 228.0
21 TraesCS3A01G193000 chr2A 90.000 180 13 4 298 474 285700151 285699974 6.930000e-56 228.0
22 TraesCS3A01G193000 chr2A 90.000 180 13 4 298 474 305308685 305308862 6.930000e-56 228.0
23 TraesCS3A01G193000 chr2D 86.164 477 39 6 945 1394 145363893 145363417 8.000000e-135 490.0
24 TraesCS3A01G193000 chr2B 85.325 477 43 6 945 1394 202921393 202920917 3.750000e-128 468.0
25 TraesCS3A01G193000 chr2B 85.787 197 21 4 1933 2125 435339888 435340081 4.200000e-48 202.0
26 TraesCS3A01G193000 chr1B 82.474 388 36 15 2126 2487 463545464 463545083 6.680000e-81 311.0
27 TraesCS3A01G193000 chr1B 87.037 216 21 5 1914 2125 463545597 463545385 1.150000e-58 237.0
28 TraesCS3A01G193000 chr6A 90.000 180 13 4 298 474 91690526 91690349 6.930000e-56 228.0
29 TraesCS3A01G193000 chr6A 90.000 180 13 4 298 474 390930300 390930477 6.930000e-56 228.0
30 TraesCS3A01G193000 chr6B 82.397 267 39 5 521 786 216416157 216416416 2.490000e-55 226.0
31 TraesCS3A01G193000 chr6B 85.787 197 21 4 1933 2125 208902052 208901859 4.200000e-48 202.0
32 TraesCS3A01G193000 chr5D 88.172 186 20 2 521 706 560145347 560145530 1.160000e-53 220.0
33 TraesCS3A01G193000 chr4B 86.911 191 22 3 521 709 617432633 617432822 6.970000e-51 211.0
34 TraesCS3A01G193000 chr3D 82.960 223 33 3 2126 2347 487395370 487395152 1.950000e-46 196.0
35 TraesCS3A01G193000 chr7D 84.080 201 23 6 1927 2125 627269142 627269335 4.230000e-43 185.0
36 TraesCS3A01G193000 chr7D 83.092 207 24 7 2126 2330 627269257 627269454 7.070000e-41 178.0
37 TraesCS3A01G193000 chr7D 93.750 80 5 0 2408 2487 77522238 77522159 1.210000e-23 121.0
38 TraesCS3A01G193000 chr1A 80.597 201 30 6 1927 2125 557329685 557329492 1.990000e-31 147.0
39 TraesCS3A01G193000 chr5B 94.937 79 4 0 2408 2486 433202540 433202462 9.350000e-25 124.0
40 TraesCS3A01G193000 chr5B 93.750 80 5 0 2408 2487 433024363 433024442 1.210000e-23 121.0
41 TraesCS3A01G193000 chr5B 93.750 80 5 0 2408 2487 433044965 433045044 1.210000e-23 121.0
42 TraesCS3A01G193000 chr5B 93.671 79 5 0 2408 2486 433196563 433196485 4.350000e-23 119.0
43 TraesCS3A01G193000 chr7B 83.186 113 16 3 674 786 63381533 63381642 1.580000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G193000 chr3A 259837202 259839690 2488 False 4597.0 4597 100.0000 1 2489 1 chr3A.!!$F1 2488
1 TraesCS3A01G193000 chr3A 451663444 451665428 1984 True 3193.0 3193 95.9190 521 2479 1 chr3A.!!$R1 1958
2 TraesCS3A01G193000 chr3A 451657602 451659581 1979 False 3162.0 3162 95.7070 526 2479 1 chr3A.!!$F2 1953
3 TraesCS3A01G193000 chr3B 703847543 703849540 1997 False 1677.5 3208 97.3380 521 2489 2 chr3B.!!$F2 1968
4 TraesCS3A01G193000 chr3B 650603409 650604231 822 True 367.0 547 82.2205 1457 2343 2 chr3B.!!$R2 886
5 TraesCS3A01G193000 chr4A 703410862 703412811 1949 False 1274.5 2124 89.0640 520 2487 2 chr4A.!!$F1 1967
6 TraesCS3A01G193000 chr5A 525733057 525735483 2426 False 1108.0 1888 96.1100 521 2489 3 chr5A.!!$F1 1968
7 TraesCS3A01G193000 chr1B 463545083 463545597 514 True 274.0 311 84.7555 1914 2487 2 chr1B.!!$R1 573

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
290 291 0.032615 AGGGACTGTTTGGTTTGGCA 60.033 50.0 0.0 0.0 37.18 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1496 1531 0.683412 GGTGGACCAAGAACCGTACT 59.317 55.0 0.0 0.0 35.64 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 4.551702 AAAAAGTGGGCATATTTGGGAC 57.448 40.909 0.00 0.00 0.00 4.46
39 40 3.473113 AAAGTGGGCATATTTGGGACT 57.527 42.857 0.00 0.00 0.00 3.85
40 41 3.473113 AAGTGGGCATATTTGGGACTT 57.527 42.857 0.00 0.00 0.00 3.01
41 42 2.738743 AGTGGGCATATTTGGGACTTG 58.261 47.619 0.00 0.00 0.00 3.16
42 43 2.042979 AGTGGGCATATTTGGGACTTGT 59.957 45.455 0.00 0.00 0.00 3.16
43 44 2.831526 GTGGGCATATTTGGGACTTGTT 59.168 45.455 0.00 0.00 0.00 2.83
44 45 3.260632 GTGGGCATATTTGGGACTTGTTT 59.739 43.478 0.00 0.00 0.00 2.83
45 46 3.513515 TGGGCATATTTGGGACTTGTTTC 59.486 43.478 0.00 0.00 0.00 2.78
46 47 3.118775 GGGCATATTTGGGACTTGTTTCC 60.119 47.826 0.00 0.00 34.52 3.13
54 55 1.804601 GGACTTGTTTCCCTACGTGG 58.195 55.000 0.00 0.00 0.00 4.94
55 56 1.071228 GGACTTGTTTCCCTACGTGGT 59.929 52.381 0.00 0.00 0.00 4.16
56 57 2.486013 GGACTTGTTTCCCTACGTGGTT 60.486 50.000 0.00 0.00 0.00 3.67
57 58 3.244181 GGACTTGTTTCCCTACGTGGTTA 60.244 47.826 0.00 0.00 0.00 2.85
58 59 4.564199 GGACTTGTTTCCCTACGTGGTTAT 60.564 45.833 0.00 0.00 0.00 1.89
59 60 4.976864 ACTTGTTTCCCTACGTGGTTATT 58.023 39.130 0.00 0.00 0.00 1.40
60 61 5.379187 ACTTGTTTCCCTACGTGGTTATTT 58.621 37.500 0.00 0.00 0.00 1.40
61 62 5.829391 ACTTGTTTCCCTACGTGGTTATTTT 59.171 36.000 0.00 0.00 0.00 1.82
62 63 5.945466 TGTTTCCCTACGTGGTTATTTTC 57.055 39.130 0.00 0.00 0.00 2.29
63 64 5.623169 TGTTTCCCTACGTGGTTATTTTCT 58.377 37.500 0.00 0.00 0.00 2.52
64 65 6.063404 TGTTTCCCTACGTGGTTATTTTCTT 58.937 36.000 0.00 0.00 0.00 2.52
65 66 6.205270 TGTTTCCCTACGTGGTTATTTTCTTC 59.795 38.462 0.00 0.00 0.00 2.87
66 67 5.750352 TCCCTACGTGGTTATTTTCTTCT 57.250 39.130 0.00 0.00 0.00 2.85
67 68 5.484715 TCCCTACGTGGTTATTTTCTTCTG 58.515 41.667 0.00 0.00 0.00 3.02
68 69 4.094442 CCCTACGTGGTTATTTTCTTCTGC 59.906 45.833 0.00 0.00 0.00 4.26
69 70 4.693566 CCTACGTGGTTATTTTCTTCTGCA 59.306 41.667 0.00 0.00 0.00 4.41
70 71 5.180492 CCTACGTGGTTATTTTCTTCTGCAA 59.820 40.000 0.00 0.00 0.00 4.08
71 72 5.508200 ACGTGGTTATTTTCTTCTGCAAA 57.492 34.783 0.00 0.00 0.00 3.68
72 73 6.084326 ACGTGGTTATTTTCTTCTGCAAAT 57.916 33.333 0.00 0.00 0.00 2.32
73 74 6.149633 ACGTGGTTATTTTCTTCTGCAAATC 58.850 36.000 0.00 0.00 0.00 2.17
74 75 6.148948 CGTGGTTATTTTCTTCTGCAAATCA 58.851 36.000 0.00 0.00 0.00 2.57
75 76 6.808212 CGTGGTTATTTTCTTCTGCAAATCAT 59.192 34.615 0.00 0.00 0.00 2.45
76 77 7.967854 CGTGGTTATTTTCTTCTGCAAATCATA 59.032 33.333 0.00 0.00 0.00 2.15
77 78 9.638239 GTGGTTATTTTCTTCTGCAAATCATAA 57.362 29.630 0.00 0.00 0.00 1.90
86 87 8.741603 TCTTCTGCAAATCATAAATCAGATCA 57.258 30.769 0.00 0.00 31.64 2.92
87 88 8.618677 TCTTCTGCAAATCATAAATCAGATCAC 58.381 33.333 0.00 0.00 31.64 3.06
88 89 6.951643 TCTGCAAATCATAAATCAGATCACG 58.048 36.000 0.00 0.00 0.00 4.35
89 90 6.539826 TCTGCAAATCATAAATCAGATCACGT 59.460 34.615 0.00 0.00 0.00 4.49
90 91 6.488817 TGCAAATCATAAATCAGATCACGTG 58.511 36.000 9.94 9.94 0.00 4.49
91 92 5.911280 GCAAATCATAAATCAGATCACGTGG 59.089 40.000 17.00 0.00 0.00 4.94
92 93 5.679734 AATCATAAATCAGATCACGTGGC 57.320 39.130 17.00 8.49 0.00 5.01
93 94 4.135747 TCATAAATCAGATCACGTGGCA 57.864 40.909 17.00 0.00 0.00 4.92
94 95 3.871006 TCATAAATCAGATCACGTGGCAC 59.129 43.478 17.00 7.79 0.00 5.01
95 96 2.479566 AAATCAGATCACGTGGCACT 57.520 45.000 17.00 9.76 0.00 4.40
96 97 2.479566 AATCAGATCACGTGGCACTT 57.520 45.000 17.00 2.74 0.00 3.16
97 98 3.610040 AATCAGATCACGTGGCACTTA 57.390 42.857 17.00 4.97 0.00 2.24
98 99 3.827008 ATCAGATCACGTGGCACTTAT 57.173 42.857 17.00 6.01 0.00 1.73
99 100 3.610040 TCAGATCACGTGGCACTTATT 57.390 42.857 17.00 0.00 0.00 1.40
100 101 3.937814 TCAGATCACGTGGCACTTATTT 58.062 40.909 17.00 0.00 0.00 1.40
101 102 3.932710 TCAGATCACGTGGCACTTATTTC 59.067 43.478 17.00 6.24 0.00 2.17
102 103 3.684305 CAGATCACGTGGCACTTATTTCA 59.316 43.478 17.00 0.00 0.00 2.69
103 104 3.935203 AGATCACGTGGCACTTATTTCAG 59.065 43.478 17.00 0.00 0.00 3.02
104 105 1.804151 TCACGTGGCACTTATTTCAGC 59.196 47.619 17.00 0.00 0.00 4.26
105 106 1.535028 CACGTGGCACTTATTTCAGCA 59.465 47.619 16.72 0.00 0.00 4.41
106 107 2.031245 CACGTGGCACTTATTTCAGCAA 60.031 45.455 16.72 0.00 0.00 3.91
107 108 2.226437 ACGTGGCACTTATTTCAGCAAG 59.774 45.455 16.72 0.00 0.00 4.01
108 109 2.226437 CGTGGCACTTATTTCAGCAAGT 59.774 45.455 16.72 0.00 35.38 3.16
109 110 3.304659 CGTGGCACTTATTTCAGCAAGTT 60.305 43.478 16.72 0.00 32.72 2.66
110 111 3.983344 GTGGCACTTATTTCAGCAAGTTG 59.017 43.478 11.13 0.00 32.72 3.16
111 112 2.989166 GGCACTTATTTCAGCAAGTTGC 59.011 45.455 20.44 20.44 45.46 4.17
123 124 2.053627 GCAAGTTGCAATCTTGGTTCG 58.946 47.619 27.69 13.42 44.26 3.95
124 125 2.664916 CAAGTTGCAATCTTGGTTCGG 58.335 47.619 23.13 6.87 38.70 4.30
125 126 1.981256 AGTTGCAATCTTGGTTCGGT 58.019 45.000 0.59 0.00 0.00 4.69
126 127 2.306847 AGTTGCAATCTTGGTTCGGTT 58.693 42.857 0.59 0.00 0.00 4.44
127 128 2.693074 AGTTGCAATCTTGGTTCGGTTT 59.307 40.909 0.59 0.00 0.00 3.27
128 129 3.049912 GTTGCAATCTTGGTTCGGTTTC 58.950 45.455 0.59 0.00 0.00 2.78
129 130 1.611491 TGCAATCTTGGTTCGGTTTCC 59.389 47.619 0.00 0.00 0.00 3.13
130 131 1.886542 GCAATCTTGGTTCGGTTTCCT 59.113 47.619 0.00 0.00 0.00 3.36
131 132 2.296190 GCAATCTTGGTTCGGTTTCCTT 59.704 45.455 0.00 0.00 0.00 3.36
132 133 3.857010 GCAATCTTGGTTCGGTTTCCTTG 60.857 47.826 0.00 0.00 0.00 3.61
133 134 2.721425 TCTTGGTTCGGTTTCCTTGT 57.279 45.000 0.00 0.00 0.00 3.16
134 135 2.567985 TCTTGGTTCGGTTTCCTTGTC 58.432 47.619 0.00 0.00 0.00 3.18
135 136 2.171870 TCTTGGTTCGGTTTCCTTGTCT 59.828 45.455 0.00 0.00 0.00 3.41
136 137 1.961793 TGGTTCGGTTTCCTTGTCTG 58.038 50.000 0.00 0.00 0.00 3.51
137 138 1.235724 GGTTCGGTTTCCTTGTCTGG 58.764 55.000 0.00 0.00 0.00 3.86
138 139 1.476291 GGTTCGGTTTCCTTGTCTGGT 60.476 52.381 0.00 0.00 0.00 4.00
139 140 2.294979 GTTCGGTTTCCTTGTCTGGTT 58.705 47.619 0.00 0.00 0.00 3.67
140 141 2.686405 GTTCGGTTTCCTTGTCTGGTTT 59.314 45.455 0.00 0.00 0.00 3.27
141 142 3.842007 TCGGTTTCCTTGTCTGGTTTA 57.158 42.857 0.00 0.00 0.00 2.01
142 143 4.360951 TCGGTTTCCTTGTCTGGTTTAT 57.639 40.909 0.00 0.00 0.00 1.40
143 144 5.486735 TCGGTTTCCTTGTCTGGTTTATA 57.513 39.130 0.00 0.00 0.00 0.98
144 145 5.484715 TCGGTTTCCTTGTCTGGTTTATAG 58.515 41.667 0.00 0.00 0.00 1.31
145 146 4.634443 CGGTTTCCTTGTCTGGTTTATAGG 59.366 45.833 0.00 0.00 0.00 2.57
146 147 5.570034 CGGTTTCCTTGTCTGGTTTATAGGA 60.570 44.000 0.00 0.00 0.00 2.94
147 148 6.243148 GGTTTCCTTGTCTGGTTTATAGGAA 58.757 40.000 0.00 0.00 39.36 3.36
148 149 6.717997 GGTTTCCTTGTCTGGTTTATAGGAAA 59.282 38.462 9.41 9.41 44.90 3.13
149 150 7.094334 GGTTTCCTTGTCTGGTTTATAGGAAAG 60.094 40.741 12.87 0.00 46.58 2.62
150 151 6.945636 TCCTTGTCTGGTTTATAGGAAAGA 57.054 37.500 0.00 0.00 0.00 2.52
151 152 7.324388 TCCTTGTCTGGTTTATAGGAAAGAA 57.676 36.000 0.00 0.00 0.00 2.52
152 153 7.751646 TCCTTGTCTGGTTTATAGGAAAGAAA 58.248 34.615 0.00 0.00 0.00 2.52
153 154 8.390921 TCCTTGTCTGGTTTATAGGAAAGAAAT 58.609 33.333 0.00 0.00 0.00 2.17
154 155 9.681062 CCTTGTCTGGTTTATAGGAAAGAAATA 57.319 33.333 0.00 0.00 0.00 1.40
156 157 9.457436 TTGTCTGGTTTATAGGAAAGAAATACC 57.543 33.333 0.00 0.00 0.00 2.73
157 158 8.607713 TGTCTGGTTTATAGGAAAGAAATACCA 58.392 33.333 0.00 0.00 0.00 3.25
158 159 9.457436 GTCTGGTTTATAGGAAAGAAATACCAA 57.543 33.333 0.00 0.00 33.20 3.67
169 170 8.082242 AGGAAAGAAATACCAAAAGACATTTCG 58.918 33.333 0.00 0.00 40.61 3.46
170 171 7.865889 GGAAAGAAATACCAAAAGACATTTCGT 59.134 33.333 0.00 0.00 40.61 3.85
171 172 8.574196 AAAGAAATACCAAAAGACATTTCGTG 57.426 30.769 0.00 0.00 40.61 4.35
172 173 6.677913 AGAAATACCAAAAGACATTTCGTGG 58.322 36.000 0.00 0.00 40.61 4.94
173 174 6.488683 AGAAATACCAAAAGACATTTCGTGGA 59.511 34.615 6.36 0.00 40.61 4.02
174 175 5.880054 ATACCAAAAGACATTTCGTGGAG 57.120 39.130 6.36 0.00 31.15 3.86
175 176 3.815809 ACCAAAAGACATTTCGTGGAGA 58.184 40.909 6.36 0.00 31.15 3.71
176 177 4.204012 ACCAAAAGACATTTCGTGGAGAA 58.796 39.130 6.36 0.00 37.01 2.87
177 178 4.275936 ACCAAAAGACATTTCGTGGAGAAG 59.724 41.667 6.36 0.00 40.40 2.85
178 179 4.320494 CCAAAAGACATTTCGTGGAGAAGG 60.320 45.833 0.00 0.00 40.40 3.46
179 180 4.351874 AAAGACATTTCGTGGAGAAGGA 57.648 40.909 0.00 0.00 40.40 3.36
180 181 4.559862 AAGACATTTCGTGGAGAAGGAT 57.440 40.909 0.00 0.00 40.40 3.24
181 182 4.559862 AGACATTTCGTGGAGAAGGATT 57.440 40.909 0.00 0.00 40.40 3.01
182 183 4.256920 AGACATTTCGTGGAGAAGGATTG 58.743 43.478 0.00 0.00 40.40 2.67
183 184 4.003648 GACATTTCGTGGAGAAGGATTGT 58.996 43.478 0.00 0.00 40.40 2.71
184 185 4.398319 ACATTTCGTGGAGAAGGATTGTT 58.602 39.130 0.00 0.00 40.40 2.83
185 186 4.827284 ACATTTCGTGGAGAAGGATTGTTT 59.173 37.500 0.00 0.00 40.40 2.83
186 187 4.829064 TTTCGTGGAGAAGGATTGTTTG 57.171 40.909 0.00 0.00 40.40 2.93
187 188 2.151202 TCGTGGAGAAGGATTGTTTGC 58.849 47.619 0.00 0.00 0.00 3.68
188 189 1.200020 CGTGGAGAAGGATTGTTTGCC 59.800 52.381 0.00 0.00 0.00 4.52
189 190 2.238521 GTGGAGAAGGATTGTTTGCCA 58.761 47.619 0.00 0.00 0.00 4.92
190 191 2.229784 GTGGAGAAGGATTGTTTGCCAG 59.770 50.000 0.00 0.00 0.00 4.85
191 192 1.203287 GGAGAAGGATTGTTTGCCAGC 59.797 52.381 0.00 0.00 0.00 4.85
192 193 1.888512 GAGAAGGATTGTTTGCCAGCA 59.111 47.619 0.00 0.00 0.00 4.41
193 194 2.297033 GAGAAGGATTGTTTGCCAGCAA 59.703 45.455 0.00 0.00 0.00 3.91
194 195 2.699846 AGAAGGATTGTTTGCCAGCAAA 59.300 40.909 13.57 13.57 42.77 3.68
195 196 3.134442 AGAAGGATTGTTTGCCAGCAAAA 59.866 39.130 18.69 5.71 45.86 2.44
196 197 3.557228 AGGATTGTTTGCCAGCAAAAA 57.443 38.095 18.69 11.53 45.86 1.94
221 222 9.736023 AAAAAGAAGATTACTAGTGCTTGTTTG 57.264 29.630 20.35 0.00 35.09 2.93
222 223 7.440523 AAGAAGATTACTAGTGCTTGTTTGG 57.559 36.000 5.39 0.00 0.00 3.28
223 224 6.769512 AGAAGATTACTAGTGCTTGTTTGGA 58.230 36.000 5.39 0.00 0.00 3.53
224 225 7.224297 AGAAGATTACTAGTGCTTGTTTGGAA 58.776 34.615 5.39 0.00 0.00 3.53
225 226 7.389053 AGAAGATTACTAGTGCTTGTTTGGAAG 59.611 37.037 5.39 0.00 0.00 3.46
226 227 5.940470 AGATTACTAGTGCTTGTTTGGAAGG 59.060 40.000 5.39 0.00 0.00 3.46
227 228 3.857157 ACTAGTGCTTGTTTGGAAGGA 57.143 42.857 0.00 0.00 0.00 3.36
228 229 4.373156 ACTAGTGCTTGTTTGGAAGGAT 57.627 40.909 0.00 0.00 0.00 3.24
229 230 4.729868 ACTAGTGCTTGTTTGGAAGGATT 58.270 39.130 0.00 0.00 0.00 3.01
230 231 5.876357 ACTAGTGCTTGTTTGGAAGGATTA 58.124 37.500 0.00 0.00 0.00 1.75
231 232 6.303839 ACTAGTGCTTGTTTGGAAGGATTAA 58.696 36.000 0.00 0.00 0.00 1.40
232 233 6.775629 ACTAGTGCTTGTTTGGAAGGATTAAA 59.224 34.615 0.00 0.00 0.00 1.52
233 234 6.478512 AGTGCTTGTTTGGAAGGATTAAAA 57.521 33.333 0.00 0.00 0.00 1.52
234 235 6.883744 AGTGCTTGTTTGGAAGGATTAAAAA 58.116 32.000 0.00 0.00 0.00 1.94
254 255 5.386958 AAAACTCAGAGTAGATACACGCA 57.613 39.130 2.64 0.00 0.00 5.24
255 256 4.358494 AACTCAGAGTAGATACACGCAC 57.642 45.455 2.64 0.00 0.00 5.34
256 257 3.344515 ACTCAGAGTAGATACACGCACA 58.655 45.455 0.00 0.00 0.00 4.57
257 258 3.127203 ACTCAGAGTAGATACACGCACAC 59.873 47.826 0.00 0.00 0.00 3.82
258 259 3.344515 TCAGAGTAGATACACGCACACT 58.655 45.455 0.00 0.00 0.00 3.55
259 260 3.756963 TCAGAGTAGATACACGCACACTT 59.243 43.478 0.00 0.00 0.00 3.16
260 261 4.217767 TCAGAGTAGATACACGCACACTTT 59.782 41.667 0.00 0.00 0.00 2.66
261 262 4.923871 CAGAGTAGATACACGCACACTTTT 59.076 41.667 0.00 0.00 0.00 2.27
262 263 4.923871 AGAGTAGATACACGCACACTTTTG 59.076 41.667 0.00 0.00 0.00 2.44
263 264 3.994392 AGTAGATACACGCACACTTTTGG 59.006 43.478 0.00 0.00 0.00 3.28
264 265 1.535462 AGATACACGCACACTTTTGGC 59.465 47.619 0.00 0.00 0.00 4.52
268 269 4.507794 CGCACACTTTTGGCGTAC 57.492 55.556 0.00 0.00 45.27 3.67
269 270 1.938861 CGCACACTTTTGGCGTACT 59.061 52.632 0.00 0.00 45.27 2.73
270 271 1.141645 CGCACACTTTTGGCGTACTA 58.858 50.000 0.00 0.00 45.27 1.82
271 272 1.527736 CGCACACTTTTGGCGTACTAA 59.472 47.619 0.00 0.00 45.27 2.24
272 273 2.411031 CGCACACTTTTGGCGTACTAAG 60.411 50.000 0.00 0.00 45.27 2.18
273 274 2.095919 GCACACTTTTGGCGTACTAAGG 60.096 50.000 0.00 0.00 0.00 2.69
274 275 2.482721 CACACTTTTGGCGTACTAAGGG 59.517 50.000 0.00 0.00 0.00 3.95
275 276 2.369532 ACACTTTTGGCGTACTAAGGGA 59.630 45.455 0.00 0.00 0.00 4.20
276 277 2.740447 CACTTTTGGCGTACTAAGGGAC 59.260 50.000 0.00 0.00 0.00 4.46
278 279 2.754946 TTTGGCGTACTAAGGGACTG 57.245 50.000 0.00 0.00 40.86 3.51
279 280 1.636148 TTGGCGTACTAAGGGACTGT 58.364 50.000 0.00 0.00 40.86 3.55
280 281 1.636148 TGGCGTACTAAGGGACTGTT 58.364 50.000 0.00 0.00 40.86 3.16
281 282 1.972795 TGGCGTACTAAGGGACTGTTT 59.027 47.619 0.00 0.00 40.86 2.83
282 283 2.289195 TGGCGTACTAAGGGACTGTTTG 60.289 50.000 0.00 0.00 40.86 2.93
283 284 2.344025 GCGTACTAAGGGACTGTTTGG 58.656 52.381 0.00 0.00 40.86 3.28
284 285 2.289257 GCGTACTAAGGGACTGTTTGGT 60.289 50.000 0.00 0.00 40.86 3.67
285 286 3.804759 GCGTACTAAGGGACTGTTTGGTT 60.805 47.826 0.00 0.00 40.86 3.67
286 287 4.383173 CGTACTAAGGGACTGTTTGGTTT 58.617 43.478 0.00 0.00 40.86 3.27
287 288 4.212636 CGTACTAAGGGACTGTTTGGTTTG 59.787 45.833 0.00 0.00 40.86 2.93
288 289 3.562182 ACTAAGGGACTGTTTGGTTTGG 58.438 45.455 0.00 0.00 40.86 3.28
289 290 1.119684 AAGGGACTGTTTGGTTTGGC 58.880 50.000 0.00 0.00 40.86 4.52
290 291 0.032615 AGGGACTGTTTGGTTTGGCA 60.033 50.000 0.00 0.00 37.18 4.92
291 292 0.827368 GGGACTGTTTGGTTTGGCAA 59.173 50.000 0.00 0.00 0.00 4.52
292 293 1.208293 GGGACTGTTTGGTTTGGCAAA 59.792 47.619 8.93 8.93 0.00 3.68
293 294 2.355209 GGGACTGTTTGGTTTGGCAAAA 60.355 45.455 15.29 0.00 0.00 2.44
294 295 3.339141 GGACTGTTTGGTTTGGCAAAAA 58.661 40.909 15.29 3.42 0.00 1.94
295 296 3.944650 GGACTGTTTGGTTTGGCAAAAAT 59.055 39.130 15.29 0.00 0.00 1.82
296 297 4.397730 GGACTGTTTGGTTTGGCAAAAATT 59.602 37.500 15.29 0.00 0.00 1.82
297 298 5.307926 ACTGTTTGGTTTGGCAAAAATTG 57.692 34.783 15.29 5.59 0.00 2.32
312 313 6.710692 CAAAAATTGCCACATCTAAGAACC 57.289 37.500 0.00 0.00 0.00 3.62
313 314 6.222389 CAAAAATTGCCACATCTAAGAACCA 58.778 36.000 0.00 0.00 0.00 3.67
314 315 5.391312 AAATTGCCACATCTAAGAACCAC 57.609 39.130 0.00 0.00 0.00 4.16
315 316 3.500448 TTGCCACATCTAAGAACCACA 57.500 42.857 0.00 0.00 0.00 4.17
316 317 3.719268 TGCCACATCTAAGAACCACAT 57.281 42.857 0.00 0.00 0.00 3.21
317 318 4.032960 TGCCACATCTAAGAACCACATT 57.967 40.909 0.00 0.00 0.00 2.71
318 319 4.406456 TGCCACATCTAAGAACCACATTT 58.594 39.130 0.00 0.00 0.00 2.32
319 320 5.565509 TGCCACATCTAAGAACCACATTTA 58.434 37.500 0.00 0.00 0.00 1.40
320 321 5.647658 TGCCACATCTAAGAACCACATTTAG 59.352 40.000 0.00 0.00 0.00 1.85
321 322 5.880332 GCCACATCTAAGAACCACATTTAGA 59.120 40.000 0.00 0.00 37.69 2.10
322 323 6.183360 GCCACATCTAAGAACCACATTTAGAC 60.183 42.308 0.00 0.00 36.54 2.59
323 324 6.316390 CCACATCTAAGAACCACATTTAGACC 59.684 42.308 0.00 0.00 36.54 3.85
324 325 6.316390 CACATCTAAGAACCACATTTAGACCC 59.684 42.308 0.00 0.00 36.54 4.46
325 326 5.431179 TCTAAGAACCACATTTAGACCCC 57.569 43.478 0.00 0.00 30.65 4.95
326 327 4.847512 TCTAAGAACCACATTTAGACCCCA 59.152 41.667 0.00 0.00 30.65 4.96
327 328 4.675063 AAGAACCACATTTAGACCCCAT 57.325 40.909 0.00 0.00 0.00 4.00
328 329 5.789574 AAGAACCACATTTAGACCCCATA 57.210 39.130 0.00 0.00 0.00 2.74
329 330 5.994416 AGAACCACATTTAGACCCCATAT 57.006 39.130 0.00 0.00 0.00 1.78
330 331 5.694995 AGAACCACATTTAGACCCCATATG 58.305 41.667 0.00 0.00 0.00 1.78
331 332 4.453480 ACCACATTTAGACCCCATATGG 57.547 45.455 15.41 15.41 0.00 2.74
332 333 3.157087 CCACATTTAGACCCCATATGGC 58.843 50.000 16.97 2.85 0.00 4.40
333 334 3.436325 CCACATTTAGACCCCATATGGCA 60.436 47.826 16.97 0.00 0.00 4.92
334 335 4.410099 CACATTTAGACCCCATATGGCAT 58.590 43.478 16.97 4.88 0.00 4.40
335 336 5.516415 CCACATTTAGACCCCATATGGCATA 60.516 44.000 16.97 10.07 0.00 3.14
336 337 5.649395 CACATTTAGACCCCATATGGCATAG 59.351 44.000 16.97 6.97 0.00 2.23
337 338 5.551583 ACATTTAGACCCCATATGGCATAGA 59.448 40.000 16.97 1.96 0.00 1.98
338 339 5.499004 TTTAGACCCCATATGGCATAGAC 57.501 43.478 16.97 5.16 0.00 2.59
339 340 2.990195 AGACCCCATATGGCATAGACA 58.010 47.619 16.97 0.00 0.00 3.41
340 341 2.639839 AGACCCCATATGGCATAGACAC 59.360 50.000 16.97 2.87 0.00 3.67
341 342 2.371841 GACCCCATATGGCATAGACACA 59.628 50.000 16.97 0.00 0.00 3.72
342 343 2.782925 ACCCCATATGGCATAGACACAA 59.217 45.455 16.97 0.00 0.00 3.33
343 344 3.204158 ACCCCATATGGCATAGACACAAA 59.796 43.478 16.97 0.00 0.00 2.83
344 345 4.214310 CCCCATATGGCATAGACACAAAA 58.786 43.478 16.97 0.00 0.00 2.44
345 346 4.648762 CCCCATATGGCATAGACACAAAAA 59.351 41.667 16.97 0.00 0.00 1.94
346 347 5.221303 CCCCATATGGCATAGACACAAAAAG 60.221 44.000 16.97 0.00 0.00 2.27
347 348 5.360714 CCCATATGGCATAGACACAAAAAGT 59.639 40.000 16.97 0.00 0.00 2.66
360 361 3.530535 ACAAAAAGTGTGGCAATGTTCC 58.469 40.909 0.00 0.00 39.72 3.62
361 362 2.871633 CAAAAAGTGTGGCAATGTTCCC 59.128 45.455 0.00 0.00 0.00 3.97
362 363 2.086610 AAAGTGTGGCAATGTTCCCT 57.913 45.000 0.00 0.00 0.00 4.20
363 364 2.086610 AAGTGTGGCAATGTTCCCTT 57.913 45.000 0.00 0.00 0.00 3.95
364 365 2.969821 AGTGTGGCAATGTTCCCTTA 57.030 45.000 0.00 0.00 0.00 2.69
365 366 2.795329 AGTGTGGCAATGTTCCCTTAG 58.205 47.619 0.00 0.00 0.00 2.18
366 367 1.818674 GTGTGGCAATGTTCCCTTAGG 59.181 52.381 0.00 0.00 0.00 2.69
367 368 0.817654 GTGGCAATGTTCCCTTAGGC 59.182 55.000 0.00 0.00 0.00 3.93
368 369 0.704076 TGGCAATGTTCCCTTAGGCT 59.296 50.000 0.00 0.00 0.00 4.58
369 370 1.077005 TGGCAATGTTCCCTTAGGCTT 59.923 47.619 0.00 0.00 0.00 4.35
370 371 1.478105 GGCAATGTTCCCTTAGGCTTG 59.522 52.381 0.00 0.00 0.00 4.01
371 372 2.171003 GCAATGTTCCCTTAGGCTTGT 58.829 47.619 0.00 0.00 0.00 3.16
372 373 2.164422 GCAATGTTCCCTTAGGCTTGTC 59.836 50.000 0.00 0.00 0.00 3.18
373 374 3.420893 CAATGTTCCCTTAGGCTTGTCA 58.579 45.455 0.00 0.00 0.00 3.58
374 375 3.806949 ATGTTCCCTTAGGCTTGTCAA 57.193 42.857 0.00 0.00 0.00 3.18
375 376 2.858745 TGTTCCCTTAGGCTTGTCAAC 58.141 47.619 0.00 0.00 0.00 3.18
376 377 2.441750 TGTTCCCTTAGGCTTGTCAACT 59.558 45.455 0.00 0.00 0.00 3.16
377 378 3.117663 TGTTCCCTTAGGCTTGTCAACTT 60.118 43.478 0.00 0.00 0.00 2.66
378 379 3.140325 TCCCTTAGGCTTGTCAACTTG 57.860 47.619 0.00 0.00 0.00 3.16
379 380 2.441750 TCCCTTAGGCTTGTCAACTTGT 59.558 45.455 0.00 0.00 0.00 3.16
380 381 2.554032 CCCTTAGGCTTGTCAACTTGTG 59.446 50.000 0.00 0.00 0.00 3.33
381 382 2.554032 CCTTAGGCTTGTCAACTTGTGG 59.446 50.000 0.00 0.00 0.00 4.17
382 383 1.604604 TAGGCTTGTCAACTTGTGGC 58.395 50.000 0.00 0.00 0.00 5.01
383 384 0.106519 AGGCTTGTCAACTTGTGGCT 60.107 50.000 0.00 0.00 30.97 4.75
384 385 0.746659 GGCTTGTCAACTTGTGGCTT 59.253 50.000 0.00 0.00 30.97 4.35
385 386 1.136891 GGCTTGTCAACTTGTGGCTTT 59.863 47.619 0.00 0.00 30.97 3.51
386 387 2.463876 GCTTGTCAACTTGTGGCTTTC 58.536 47.619 0.00 0.00 30.97 2.62
387 388 2.159254 GCTTGTCAACTTGTGGCTTTCA 60.159 45.455 0.00 0.00 30.97 2.69
388 389 3.491447 GCTTGTCAACTTGTGGCTTTCAT 60.491 43.478 0.00 0.00 30.97 2.57
389 390 4.685924 CTTGTCAACTTGTGGCTTTCATT 58.314 39.130 0.00 0.00 30.97 2.57
390 391 4.734398 TGTCAACTTGTGGCTTTCATTT 57.266 36.364 0.00 0.00 30.97 2.32
391 392 5.083533 TGTCAACTTGTGGCTTTCATTTT 57.916 34.783 0.00 0.00 30.97 1.82
392 393 4.869297 TGTCAACTTGTGGCTTTCATTTTG 59.131 37.500 0.00 0.00 30.97 2.44
393 394 5.108517 GTCAACTTGTGGCTTTCATTTTGA 58.891 37.500 0.00 0.00 0.00 2.69
394 395 5.754890 GTCAACTTGTGGCTTTCATTTTGAT 59.245 36.000 0.00 0.00 0.00 2.57
395 396 5.754406 TCAACTTGTGGCTTTCATTTTGATG 59.246 36.000 0.00 0.00 0.00 3.07
396 397 5.534207 ACTTGTGGCTTTCATTTTGATGA 57.466 34.783 0.00 0.00 0.00 2.92
397 398 5.916318 ACTTGTGGCTTTCATTTTGATGAA 58.084 33.333 0.00 0.00 38.64 2.57
398 399 5.754890 ACTTGTGGCTTTCATTTTGATGAAC 59.245 36.000 1.57 0.00 39.95 3.18
399 400 5.534207 TGTGGCTTTCATTTTGATGAACT 57.466 34.783 1.57 0.00 39.95 3.01
400 401 6.647334 TGTGGCTTTCATTTTGATGAACTA 57.353 33.333 1.57 0.00 39.95 2.24
401 402 7.048629 TGTGGCTTTCATTTTGATGAACTAA 57.951 32.000 1.57 0.00 39.95 2.24
402 403 7.669427 TGTGGCTTTCATTTTGATGAACTAAT 58.331 30.769 1.57 0.00 39.95 1.73
403 404 7.814107 TGTGGCTTTCATTTTGATGAACTAATC 59.186 33.333 1.57 0.00 39.95 1.75
404 405 8.031277 GTGGCTTTCATTTTGATGAACTAATCT 58.969 33.333 1.57 0.00 39.95 2.40
405 406 8.587608 TGGCTTTCATTTTGATGAACTAATCTT 58.412 29.630 1.57 0.00 39.95 2.40
410 411 8.806429 TCATTTTGATGAACTAATCTTAGGCA 57.194 30.769 2.29 0.82 35.08 4.75
411 412 9.241919 TCATTTTGATGAACTAATCTTAGGCAA 57.758 29.630 2.29 0.00 35.08 4.52
412 413 9.512435 CATTTTGATGAACTAATCTTAGGCAAG 57.488 33.333 2.29 0.00 35.08 4.01
413 414 8.635765 TTTTGATGAACTAATCTTAGGCAAGT 57.364 30.769 2.29 0.00 35.08 3.16
414 415 8.635765 TTTGATGAACTAATCTTAGGCAAGTT 57.364 30.769 2.29 0.00 35.08 2.66
415 416 8.635765 TTGATGAACTAATCTTAGGCAAGTTT 57.364 30.769 2.29 0.00 35.08 2.66
416 417 8.044060 TGATGAACTAATCTTAGGCAAGTTTG 57.956 34.615 2.29 0.00 35.08 2.93
417 418 7.882791 TGATGAACTAATCTTAGGCAAGTTTGA 59.117 33.333 2.29 0.00 35.08 2.69
418 419 7.435068 TGAACTAATCTTAGGCAAGTTTGAC 57.565 36.000 2.29 0.00 35.08 3.18
419 420 6.995686 TGAACTAATCTTAGGCAAGTTTGACA 59.004 34.615 0.00 0.00 39.18 3.58
420 421 7.500892 TGAACTAATCTTAGGCAAGTTTGACAA 59.499 33.333 0.00 0.00 39.18 3.18
421 422 7.817418 ACTAATCTTAGGCAAGTTTGACAAA 57.183 32.000 0.00 0.00 39.18 2.83
422 423 8.232913 ACTAATCTTAGGCAAGTTTGACAAAA 57.767 30.769 1.27 0.00 39.18 2.44
423 424 8.691797 ACTAATCTTAGGCAAGTTTGACAAAAA 58.308 29.630 1.27 0.00 39.18 1.94
442 443 2.600470 AAATGTGTGGCAAAGTGTGG 57.400 45.000 0.00 0.00 0.00 4.17
451 452 1.986698 GCAAAGTGTGGCAATGCTAG 58.013 50.000 4.82 0.00 34.29 3.42
452 453 1.270550 GCAAAGTGTGGCAATGCTAGT 59.729 47.619 4.82 0.00 34.29 2.57
453 454 2.669391 GCAAAGTGTGGCAATGCTAGTC 60.669 50.000 4.82 0.00 34.29 2.59
454 455 1.826385 AAGTGTGGCAATGCTAGTCC 58.174 50.000 4.82 0.00 0.00 3.85
455 456 0.987294 AGTGTGGCAATGCTAGTCCT 59.013 50.000 4.82 0.00 0.00 3.85
456 457 2.187958 AGTGTGGCAATGCTAGTCCTA 58.812 47.619 4.82 0.00 0.00 2.94
457 458 2.571653 AGTGTGGCAATGCTAGTCCTAA 59.428 45.455 4.82 0.00 0.00 2.69
458 459 3.009033 AGTGTGGCAATGCTAGTCCTAAA 59.991 43.478 4.82 0.00 0.00 1.85
459 460 3.756434 GTGTGGCAATGCTAGTCCTAAAA 59.244 43.478 4.82 0.00 0.00 1.52
460 461 4.399303 GTGTGGCAATGCTAGTCCTAAAAT 59.601 41.667 4.82 0.00 0.00 1.82
461 462 4.640201 TGTGGCAATGCTAGTCCTAAAATC 59.360 41.667 4.82 0.00 0.00 2.17
462 463 4.640201 GTGGCAATGCTAGTCCTAAAATCA 59.360 41.667 4.82 0.00 0.00 2.57
463 464 5.125417 GTGGCAATGCTAGTCCTAAAATCAA 59.875 40.000 4.82 0.00 0.00 2.57
464 465 5.714333 TGGCAATGCTAGTCCTAAAATCAAA 59.286 36.000 4.82 0.00 0.00 2.69
465 466 6.036470 GGCAATGCTAGTCCTAAAATCAAAC 58.964 40.000 4.82 0.00 0.00 2.93
466 467 6.350110 GGCAATGCTAGTCCTAAAATCAAACA 60.350 38.462 4.82 0.00 0.00 2.83
467 468 6.749118 GCAATGCTAGTCCTAAAATCAAACAG 59.251 38.462 0.00 0.00 0.00 3.16
468 469 5.880054 TGCTAGTCCTAAAATCAAACAGC 57.120 39.130 0.00 0.00 0.00 4.40
469 470 4.700213 TGCTAGTCCTAAAATCAAACAGCC 59.300 41.667 0.00 0.00 0.00 4.85
470 471 4.096532 GCTAGTCCTAAAATCAAACAGCCC 59.903 45.833 0.00 0.00 0.00 5.19
471 472 3.431415 AGTCCTAAAATCAAACAGCCCC 58.569 45.455 0.00 0.00 0.00 5.80
472 473 3.076032 AGTCCTAAAATCAAACAGCCCCT 59.924 43.478 0.00 0.00 0.00 4.79
473 474 4.291249 AGTCCTAAAATCAAACAGCCCCTA 59.709 41.667 0.00 0.00 0.00 3.53
474 475 5.014202 GTCCTAAAATCAAACAGCCCCTAA 58.986 41.667 0.00 0.00 0.00 2.69
475 476 5.125578 GTCCTAAAATCAAACAGCCCCTAAG 59.874 44.000 0.00 0.00 0.00 2.18
476 477 5.016831 CCTAAAATCAAACAGCCCCTAAGT 58.983 41.667 0.00 0.00 0.00 2.24
477 478 5.480422 CCTAAAATCAAACAGCCCCTAAGTT 59.520 40.000 0.00 0.00 0.00 2.66
478 479 6.661805 CCTAAAATCAAACAGCCCCTAAGTTA 59.338 38.462 0.00 0.00 0.00 2.24
479 480 6.590234 AAAATCAAACAGCCCCTAAGTTAG 57.410 37.500 2.65 2.65 0.00 2.34
480 481 3.067684 TCAAACAGCCCCTAAGTTAGC 57.932 47.619 4.22 0.00 0.00 3.09
481 482 2.373836 TCAAACAGCCCCTAAGTTAGCA 59.626 45.455 4.22 0.00 0.00 3.49
482 483 3.153919 CAAACAGCCCCTAAGTTAGCAA 58.846 45.455 4.22 0.00 0.00 3.91
483 484 2.789409 ACAGCCCCTAAGTTAGCAAG 57.211 50.000 4.22 0.00 0.00 4.01
484 485 1.985895 ACAGCCCCTAAGTTAGCAAGT 59.014 47.619 4.22 0.00 0.00 3.16
485 486 2.375509 ACAGCCCCTAAGTTAGCAAGTT 59.624 45.455 4.22 0.00 0.00 2.66
486 487 3.585732 ACAGCCCCTAAGTTAGCAAGTTA 59.414 43.478 4.22 0.00 0.00 2.24
487 488 3.939592 CAGCCCCTAAGTTAGCAAGTTAC 59.060 47.826 4.22 0.00 0.00 2.50
488 489 3.585732 AGCCCCTAAGTTAGCAAGTTACA 59.414 43.478 4.22 0.00 0.00 2.41
489 490 3.939592 GCCCCTAAGTTAGCAAGTTACAG 59.060 47.826 4.22 0.00 0.00 2.74
490 491 4.565028 GCCCCTAAGTTAGCAAGTTACAGT 60.565 45.833 4.22 0.00 0.00 3.55
491 492 5.557866 CCCCTAAGTTAGCAAGTTACAGTT 58.442 41.667 4.22 0.00 0.00 3.16
492 493 6.002082 CCCCTAAGTTAGCAAGTTACAGTTT 58.998 40.000 4.22 0.00 0.00 2.66
493 494 6.148976 CCCCTAAGTTAGCAAGTTACAGTTTC 59.851 42.308 4.22 0.00 0.00 2.78
494 495 6.148976 CCCTAAGTTAGCAAGTTACAGTTTCC 59.851 42.308 4.22 0.00 0.00 3.13
495 496 6.708949 CCTAAGTTAGCAAGTTACAGTTTCCA 59.291 38.462 4.22 0.00 0.00 3.53
496 497 6.373186 AAGTTAGCAAGTTACAGTTTCCAC 57.627 37.500 0.00 0.00 0.00 4.02
497 498 5.433526 AGTTAGCAAGTTACAGTTTCCACA 58.566 37.500 0.00 0.00 0.00 4.17
498 499 5.883673 AGTTAGCAAGTTACAGTTTCCACAA 59.116 36.000 0.00 0.00 0.00 3.33
499 500 6.376018 AGTTAGCAAGTTACAGTTTCCACAAA 59.624 34.615 0.00 0.00 0.00 2.83
500 501 5.248870 AGCAAGTTACAGTTTCCACAAAG 57.751 39.130 0.00 0.00 0.00 2.77
501 502 4.947388 AGCAAGTTACAGTTTCCACAAAGA 59.053 37.500 0.00 0.00 0.00 2.52
502 503 5.417580 AGCAAGTTACAGTTTCCACAAAGAA 59.582 36.000 0.00 0.00 0.00 2.52
503 504 6.071616 AGCAAGTTACAGTTTCCACAAAGAAA 60.072 34.615 0.00 0.00 33.40 2.52
504 505 6.588373 GCAAGTTACAGTTTCCACAAAGAAAA 59.412 34.615 0.00 0.00 37.49 2.29
505 506 7.117092 GCAAGTTACAGTTTCCACAAAGAAAAA 59.883 33.333 0.00 0.00 37.49 1.94
593 594 4.377021 CCTAAGCTACACAGAACAACACA 58.623 43.478 0.00 0.00 0.00 3.72
615 616 3.456277 AGAGAAATTACAGCCTCCCGATT 59.544 43.478 0.00 0.00 0.00 3.34
778 780 3.194755 TCAATTAGCGCTAACCTCTCACA 59.805 43.478 30.92 7.09 0.00 3.58
822 825 1.546773 CGTCCCAACCTTCCCAAATCA 60.547 52.381 0.00 0.00 0.00 2.57
887 895 2.438795 CCCCAAATCCACCGTGGT 59.561 61.111 17.32 2.29 39.03 4.16
915 926 2.930019 TAGCAGCAGCACCACCCT 60.930 61.111 3.17 0.00 45.49 4.34
1120 1142 4.760047 GCCGCCATGTCGAGGTGT 62.760 66.667 0.00 0.00 34.86 4.16
1271 1295 1.007271 ACAAGCACGTCTCCGTCAG 60.007 57.895 0.00 0.00 46.28 3.51
1417 1445 0.179086 TGCGCCAATCAATCTCGCTA 60.179 50.000 4.18 0.00 45.24 4.26
1444 1472 2.417719 CTAATTGCCTATCCTCGCACC 58.582 52.381 0.00 0.00 33.97 5.01
1496 1531 5.014858 ACGAGGACAACAGTAGGATCTAAA 58.985 41.667 0.00 0.00 0.00 1.85
1525 1560 2.445145 TCTTGGTCCACCCTTTTCATCA 59.555 45.455 0.00 0.00 34.29 3.07
1907 2417 8.345565 GCTGATTATACAAAACCATTAGTCAGG 58.654 37.037 0.00 0.00 31.42 3.86
2257 2773 3.071602 AGAGTGCAAGTCTTTTCCTGCTA 59.928 43.478 0.00 0.00 46.68 3.49
2344 2860 8.093307 TGCATTATTTAGAAGGCACAAATTTCA 58.907 29.630 0.00 0.00 40.88 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.167319 AGTCCCAAATATGCCCACTTTTT 58.833 39.130 0.00 0.00 0.00 1.94
18 19 3.790126 AGTCCCAAATATGCCCACTTTT 58.210 40.909 0.00 0.00 0.00 2.27
19 20 3.473113 AGTCCCAAATATGCCCACTTT 57.527 42.857 0.00 0.00 0.00 2.66
20 21 3.099141 CAAGTCCCAAATATGCCCACTT 58.901 45.455 0.00 0.00 0.00 3.16
21 22 2.042979 ACAAGTCCCAAATATGCCCACT 59.957 45.455 0.00 0.00 0.00 4.00
22 23 2.456577 ACAAGTCCCAAATATGCCCAC 58.543 47.619 0.00 0.00 0.00 4.61
23 24 2.917713 ACAAGTCCCAAATATGCCCA 57.082 45.000 0.00 0.00 0.00 5.36
24 25 3.118775 GGAAACAAGTCCCAAATATGCCC 60.119 47.826 0.00 0.00 0.00 5.36
25 26 4.123497 GGAAACAAGTCCCAAATATGCC 57.877 45.455 0.00 0.00 0.00 4.40
35 36 1.071228 ACCACGTAGGGAAACAAGTCC 59.929 52.381 0.00 0.00 43.89 3.85
36 37 2.538512 ACCACGTAGGGAAACAAGTC 57.461 50.000 0.00 0.00 43.89 3.01
37 38 4.628963 ATAACCACGTAGGGAAACAAGT 57.371 40.909 0.00 0.00 43.89 3.16
38 39 5.952526 AAATAACCACGTAGGGAAACAAG 57.047 39.130 0.00 0.00 43.89 3.16
39 40 6.063404 AGAAAATAACCACGTAGGGAAACAA 58.937 36.000 0.00 0.00 43.89 2.83
40 41 5.623169 AGAAAATAACCACGTAGGGAAACA 58.377 37.500 0.00 0.00 43.89 2.83
41 42 6.429078 AGAAGAAAATAACCACGTAGGGAAAC 59.571 38.462 0.00 0.00 43.89 2.78
42 43 6.428771 CAGAAGAAAATAACCACGTAGGGAAA 59.571 38.462 0.00 0.00 43.89 3.13
43 44 5.935789 CAGAAGAAAATAACCACGTAGGGAA 59.064 40.000 0.00 0.00 43.89 3.97
44 45 5.484715 CAGAAGAAAATAACCACGTAGGGA 58.515 41.667 0.00 0.00 43.89 4.20
45 46 4.094442 GCAGAAGAAAATAACCACGTAGGG 59.906 45.833 8.57 0.00 43.89 3.53
46 47 4.693566 TGCAGAAGAAAATAACCACGTAGG 59.306 41.667 0.00 0.00 45.67 3.18
47 48 5.856126 TGCAGAAGAAAATAACCACGTAG 57.144 39.130 0.00 0.00 0.00 3.51
48 49 6.621316 TTTGCAGAAGAAAATAACCACGTA 57.379 33.333 0.00 0.00 0.00 3.57
49 50 5.508200 TTTGCAGAAGAAAATAACCACGT 57.492 34.783 0.00 0.00 0.00 4.49
50 51 6.148948 TGATTTGCAGAAGAAAATAACCACG 58.851 36.000 0.00 0.00 32.99 4.94
51 52 9.638239 TTATGATTTGCAGAAGAAAATAACCAC 57.362 29.630 0.00 0.00 32.99 4.16
60 61 9.181061 TGATCTGATTTATGATTTGCAGAAGAA 57.819 29.630 0.00 0.00 36.17 2.52
61 62 8.618677 GTGATCTGATTTATGATTTGCAGAAGA 58.381 33.333 0.00 0.00 36.17 2.87
62 63 7.586664 CGTGATCTGATTTATGATTTGCAGAAG 59.413 37.037 0.00 0.00 36.17 2.85
63 64 7.066163 ACGTGATCTGATTTATGATTTGCAGAA 59.934 33.333 0.00 0.00 36.17 3.02
64 65 6.539826 ACGTGATCTGATTTATGATTTGCAGA 59.460 34.615 0.00 0.00 36.88 4.26
65 66 6.631636 CACGTGATCTGATTTATGATTTGCAG 59.368 38.462 10.90 0.00 0.00 4.41
66 67 6.458615 CCACGTGATCTGATTTATGATTTGCA 60.459 38.462 19.30 0.00 0.00 4.08
67 68 5.911280 CCACGTGATCTGATTTATGATTTGC 59.089 40.000 19.30 0.00 0.00 3.68
68 69 5.911280 GCCACGTGATCTGATTTATGATTTG 59.089 40.000 19.30 0.00 0.00 2.32
69 70 5.589855 TGCCACGTGATCTGATTTATGATTT 59.410 36.000 19.30 0.00 0.00 2.17
70 71 5.008019 GTGCCACGTGATCTGATTTATGATT 59.992 40.000 19.30 0.00 0.00 2.57
71 72 4.512944 GTGCCACGTGATCTGATTTATGAT 59.487 41.667 19.30 0.00 0.00 2.45
72 73 3.871006 GTGCCACGTGATCTGATTTATGA 59.129 43.478 19.30 0.00 0.00 2.15
73 74 3.873361 AGTGCCACGTGATCTGATTTATG 59.127 43.478 19.30 0.00 0.00 1.90
74 75 4.142609 AGTGCCACGTGATCTGATTTAT 57.857 40.909 19.30 0.00 0.00 1.40
75 76 3.610040 AGTGCCACGTGATCTGATTTA 57.390 42.857 19.30 0.00 0.00 1.40
76 77 2.479566 AGTGCCACGTGATCTGATTT 57.520 45.000 19.30 0.00 0.00 2.17
77 78 2.479566 AAGTGCCACGTGATCTGATT 57.520 45.000 19.30 0.93 0.00 2.57
78 79 3.827008 ATAAGTGCCACGTGATCTGAT 57.173 42.857 19.30 7.77 0.00 2.90
79 80 3.610040 AATAAGTGCCACGTGATCTGA 57.390 42.857 19.30 5.65 0.00 3.27
80 81 3.684305 TGAAATAAGTGCCACGTGATCTG 59.316 43.478 19.30 0.29 0.00 2.90
81 82 3.935203 CTGAAATAAGTGCCACGTGATCT 59.065 43.478 19.30 9.13 0.00 2.75
82 83 3.485877 GCTGAAATAAGTGCCACGTGATC 60.486 47.826 19.30 9.02 0.00 2.92
83 84 2.420022 GCTGAAATAAGTGCCACGTGAT 59.580 45.455 19.30 0.00 0.00 3.06
84 85 1.804151 GCTGAAATAAGTGCCACGTGA 59.196 47.619 19.30 0.00 0.00 4.35
85 86 1.535028 TGCTGAAATAAGTGCCACGTG 59.465 47.619 9.08 9.08 0.00 4.49
86 87 1.890876 TGCTGAAATAAGTGCCACGT 58.109 45.000 0.00 0.00 0.00 4.49
87 88 2.226437 ACTTGCTGAAATAAGTGCCACG 59.774 45.455 0.00 0.00 35.91 4.94
88 89 3.923017 ACTTGCTGAAATAAGTGCCAC 57.077 42.857 0.00 0.00 35.91 5.01
89 90 3.552684 GCAACTTGCTGAAATAAGTGCCA 60.553 43.478 6.50 0.00 40.96 4.92
90 91 2.989166 GCAACTTGCTGAAATAAGTGCC 59.011 45.455 6.50 0.00 40.96 5.01
91 92 3.641648 TGCAACTTGCTGAAATAAGTGC 58.358 40.909 14.78 0.00 45.31 4.40
92 93 6.154445 AGATTGCAACTTGCTGAAATAAGTG 58.846 36.000 14.78 0.00 45.31 3.16
93 94 6.336842 AGATTGCAACTTGCTGAAATAAGT 57.663 33.333 14.78 0.00 45.31 2.24
94 95 6.090358 CCAAGATTGCAACTTGCTGAAATAAG 59.910 38.462 24.43 11.86 45.31 1.73
95 96 5.927689 CCAAGATTGCAACTTGCTGAAATAA 59.072 36.000 24.43 0.27 45.31 1.40
96 97 5.010922 ACCAAGATTGCAACTTGCTGAAATA 59.989 36.000 24.43 0.00 45.31 1.40
97 98 4.202284 ACCAAGATTGCAACTTGCTGAAAT 60.202 37.500 24.43 6.43 45.31 2.17
98 99 3.132646 ACCAAGATTGCAACTTGCTGAAA 59.867 39.130 24.43 1.68 45.31 2.69
99 100 2.694628 ACCAAGATTGCAACTTGCTGAA 59.305 40.909 24.43 2.39 45.31 3.02
100 101 2.309613 ACCAAGATTGCAACTTGCTGA 58.690 42.857 24.43 4.34 45.31 4.26
101 102 2.806608 ACCAAGATTGCAACTTGCTG 57.193 45.000 24.43 18.07 45.31 4.41
102 103 2.287788 CGAACCAAGATTGCAACTTGCT 60.288 45.455 24.43 17.60 45.31 3.91
103 104 2.053627 CGAACCAAGATTGCAACTTGC 58.946 47.619 24.43 6.82 45.29 4.01
104 105 2.034558 ACCGAACCAAGATTGCAACTTG 59.965 45.455 23.56 23.56 42.72 3.16
105 106 2.306847 ACCGAACCAAGATTGCAACTT 58.693 42.857 0.00 4.82 0.00 2.66
106 107 1.981256 ACCGAACCAAGATTGCAACT 58.019 45.000 0.00 0.00 0.00 3.16
107 108 2.793278 AACCGAACCAAGATTGCAAC 57.207 45.000 0.00 0.00 0.00 4.17
108 109 2.035321 GGAAACCGAACCAAGATTGCAA 59.965 45.455 0.00 0.00 0.00 4.08
109 110 1.611491 GGAAACCGAACCAAGATTGCA 59.389 47.619 0.00 0.00 0.00 4.08
110 111 1.886542 AGGAAACCGAACCAAGATTGC 59.113 47.619 0.00 0.00 0.00 3.56
111 112 3.317993 ACAAGGAAACCGAACCAAGATTG 59.682 43.478 0.00 0.00 0.00 2.67
112 113 3.562182 ACAAGGAAACCGAACCAAGATT 58.438 40.909 0.00 0.00 0.00 2.40
113 114 3.146847 GACAAGGAAACCGAACCAAGAT 58.853 45.455 0.00 0.00 0.00 2.40
114 115 2.171870 AGACAAGGAAACCGAACCAAGA 59.828 45.455 0.00 0.00 0.00 3.02
115 116 2.290641 CAGACAAGGAAACCGAACCAAG 59.709 50.000 0.00 0.00 0.00 3.61
116 117 2.294074 CAGACAAGGAAACCGAACCAA 58.706 47.619 0.00 0.00 0.00 3.67
117 118 1.476110 CCAGACAAGGAAACCGAACCA 60.476 52.381 0.00 0.00 0.00 3.67
118 119 1.235724 CCAGACAAGGAAACCGAACC 58.764 55.000 0.00 0.00 0.00 3.62
119 120 1.963172 ACCAGACAAGGAAACCGAAC 58.037 50.000 0.00 0.00 0.00 3.95
120 121 2.721425 AACCAGACAAGGAAACCGAA 57.279 45.000 0.00 0.00 0.00 4.30
121 122 2.721425 AAACCAGACAAGGAAACCGA 57.279 45.000 0.00 0.00 0.00 4.69
122 123 4.634443 CCTATAAACCAGACAAGGAAACCG 59.366 45.833 0.00 0.00 0.00 4.44
123 124 5.812286 TCCTATAAACCAGACAAGGAAACC 58.188 41.667 0.00 0.00 30.34 3.27
124 125 7.664318 TCTTTCCTATAAACCAGACAAGGAAAC 59.336 37.037 9.65 0.00 44.23 2.78
125 126 7.751646 TCTTTCCTATAAACCAGACAAGGAAA 58.248 34.615 12.39 12.39 45.91 3.13
126 127 7.324388 TCTTTCCTATAAACCAGACAAGGAA 57.676 36.000 0.00 0.00 40.45 3.36
127 128 6.945636 TCTTTCCTATAAACCAGACAAGGA 57.054 37.500 0.00 0.00 0.00 3.36
128 129 7.996098 TTTCTTTCCTATAAACCAGACAAGG 57.004 36.000 0.00 0.00 0.00 3.61
130 131 9.457436 GGTATTTCTTTCCTATAAACCAGACAA 57.543 33.333 0.00 0.00 0.00 3.18
131 132 8.607713 TGGTATTTCTTTCCTATAAACCAGACA 58.392 33.333 0.00 0.00 31.21 3.41
132 133 9.457436 TTGGTATTTCTTTCCTATAAACCAGAC 57.543 33.333 0.00 0.00 35.99 3.51
143 144 8.082242 CGAAATGTCTTTTGGTATTTCTTTCCT 58.918 33.333 0.00 0.00 37.38 3.36
144 145 7.865889 ACGAAATGTCTTTTGGTATTTCTTTCC 59.134 33.333 0.00 0.00 37.38 3.13
145 146 8.690840 CACGAAATGTCTTTTGGTATTTCTTTC 58.309 33.333 0.00 0.00 37.38 2.62
146 147 7.651704 CCACGAAATGTCTTTTGGTATTTCTTT 59.348 33.333 0.00 0.00 37.38 2.52
147 148 7.013846 TCCACGAAATGTCTTTTGGTATTTCTT 59.986 33.333 0.00 0.00 37.38 2.52
148 149 6.488683 TCCACGAAATGTCTTTTGGTATTTCT 59.511 34.615 0.00 0.00 37.38 2.52
149 150 6.674066 TCCACGAAATGTCTTTTGGTATTTC 58.326 36.000 0.00 0.00 34.45 2.17
150 151 6.488683 TCTCCACGAAATGTCTTTTGGTATTT 59.511 34.615 0.00 0.00 34.45 1.40
151 152 6.001460 TCTCCACGAAATGTCTTTTGGTATT 58.999 36.000 0.00 0.00 34.45 1.89
152 153 5.556915 TCTCCACGAAATGTCTTTTGGTAT 58.443 37.500 0.00 0.00 34.45 2.73
153 154 4.963373 TCTCCACGAAATGTCTTTTGGTA 58.037 39.130 0.00 0.00 34.45 3.25
154 155 3.815809 TCTCCACGAAATGTCTTTTGGT 58.184 40.909 0.00 0.00 36.79 3.67
155 156 4.320494 CCTTCTCCACGAAATGTCTTTTGG 60.320 45.833 0.00 0.00 31.04 3.28
156 157 4.515191 TCCTTCTCCACGAAATGTCTTTTG 59.485 41.667 0.00 0.00 32.77 2.44
157 158 4.714632 TCCTTCTCCACGAAATGTCTTTT 58.285 39.130 0.00 0.00 0.00 2.27
158 159 4.351874 TCCTTCTCCACGAAATGTCTTT 57.648 40.909 0.00 0.00 0.00 2.52
159 160 4.559862 ATCCTTCTCCACGAAATGTCTT 57.440 40.909 0.00 0.00 0.00 3.01
160 161 4.256920 CAATCCTTCTCCACGAAATGTCT 58.743 43.478 0.00 0.00 0.00 3.41
161 162 4.003648 ACAATCCTTCTCCACGAAATGTC 58.996 43.478 0.00 0.00 0.00 3.06
162 163 4.021102 ACAATCCTTCTCCACGAAATGT 57.979 40.909 0.00 0.00 0.00 2.71
163 164 5.156355 CAAACAATCCTTCTCCACGAAATG 58.844 41.667 0.00 0.00 0.00 2.32
164 165 4.321230 GCAAACAATCCTTCTCCACGAAAT 60.321 41.667 0.00 0.00 0.00 2.17
165 166 3.004315 GCAAACAATCCTTCTCCACGAAA 59.996 43.478 0.00 0.00 0.00 3.46
166 167 2.552315 GCAAACAATCCTTCTCCACGAA 59.448 45.455 0.00 0.00 0.00 3.85
167 168 2.151202 GCAAACAATCCTTCTCCACGA 58.849 47.619 0.00 0.00 0.00 4.35
168 169 1.200020 GGCAAACAATCCTTCTCCACG 59.800 52.381 0.00 0.00 0.00 4.94
169 170 2.229784 CTGGCAAACAATCCTTCTCCAC 59.770 50.000 0.00 0.00 0.00 4.02
170 171 2.517959 CTGGCAAACAATCCTTCTCCA 58.482 47.619 0.00 0.00 0.00 3.86
171 172 1.203287 GCTGGCAAACAATCCTTCTCC 59.797 52.381 0.00 0.00 0.00 3.71
172 173 1.888512 TGCTGGCAAACAATCCTTCTC 59.111 47.619 0.00 0.00 0.00 2.87
173 174 1.999648 TGCTGGCAAACAATCCTTCT 58.000 45.000 0.00 0.00 0.00 2.85
174 175 2.818130 TTGCTGGCAAACAATCCTTC 57.182 45.000 5.47 0.00 32.44 3.46
175 176 3.557228 TTTTGCTGGCAAACAATCCTT 57.443 38.095 18.55 0.00 44.39 3.36
176 177 3.557228 TTTTTGCTGGCAAACAATCCT 57.443 38.095 18.55 0.00 44.39 3.24
195 196 9.736023 CAAACAAGCACTAGTAATCTTCTTTTT 57.264 29.630 0.00 0.00 0.00 1.94
196 197 8.352942 CCAAACAAGCACTAGTAATCTTCTTTT 58.647 33.333 0.00 0.00 0.00 2.27
197 198 7.719633 TCCAAACAAGCACTAGTAATCTTCTTT 59.280 33.333 0.00 0.00 0.00 2.52
198 199 7.224297 TCCAAACAAGCACTAGTAATCTTCTT 58.776 34.615 0.00 0.00 0.00 2.52
199 200 6.769512 TCCAAACAAGCACTAGTAATCTTCT 58.230 36.000 0.00 0.00 0.00 2.85
200 201 7.361286 CCTTCCAAACAAGCACTAGTAATCTTC 60.361 40.741 0.00 0.00 0.00 2.87
201 202 6.431234 CCTTCCAAACAAGCACTAGTAATCTT 59.569 38.462 0.00 0.00 0.00 2.40
202 203 5.940470 CCTTCCAAACAAGCACTAGTAATCT 59.060 40.000 0.00 0.00 0.00 2.40
203 204 5.938125 TCCTTCCAAACAAGCACTAGTAATC 59.062 40.000 0.00 0.00 0.00 1.75
204 205 5.876357 TCCTTCCAAACAAGCACTAGTAAT 58.124 37.500 0.00 0.00 0.00 1.89
205 206 5.298989 TCCTTCCAAACAAGCACTAGTAA 57.701 39.130 0.00 0.00 0.00 2.24
206 207 4.967084 TCCTTCCAAACAAGCACTAGTA 57.033 40.909 0.00 0.00 0.00 1.82
207 208 3.857157 TCCTTCCAAACAAGCACTAGT 57.143 42.857 0.00 0.00 0.00 2.57
208 209 6.817765 TTAATCCTTCCAAACAAGCACTAG 57.182 37.500 0.00 0.00 0.00 2.57
209 210 7.589958 TTTTAATCCTTCCAAACAAGCACTA 57.410 32.000 0.00 0.00 0.00 2.74
210 211 6.478512 TTTTAATCCTTCCAAACAAGCACT 57.521 33.333 0.00 0.00 0.00 4.40
231 232 5.634020 GTGCGTGTATCTACTCTGAGTTTTT 59.366 40.000 16.53 3.71 0.00 1.94
232 233 5.162075 GTGCGTGTATCTACTCTGAGTTTT 58.838 41.667 16.53 4.06 0.00 2.43
233 234 4.217767 TGTGCGTGTATCTACTCTGAGTTT 59.782 41.667 16.53 4.41 0.00 2.66
234 235 3.756963 TGTGCGTGTATCTACTCTGAGTT 59.243 43.478 16.53 0.30 0.00 3.01
235 236 3.127203 GTGTGCGTGTATCTACTCTGAGT 59.873 47.826 15.57 15.57 0.00 3.41
236 237 3.375610 AGTGTGCGTGTATCTACTCTGAG 59.624 47.826 2.45 2.45 0.00 3.35
237 238 3.344515 AGTGTGCGTGTATCTACTCTGA 58.655 45.455 0.00 0.00 0.00 3.27
238 239 3.766676 AGTGTGCGTGTATCTACTCTG 57.233 47.619 0.00 0.00 0.00 3.35
239 240 4.785511 AAAGTGTGCGTGTATCTACTCT 57.214 40.909 0.00 0.00 0.00 3.24
240 241 4.091509 CCAAAAGTGTGCGTGTATCTACTC 59.908 45.833 0.00 0.00 0.00 2.59
241 242 3.994392 CCAAAAGTGTGCGTGTATCTACT 59.006 43.478 0.00 0.00 0.00 2.57
242 243 3.424433 GCCAAAAGTGTGCGTGTATCTAC 60.424 47.826 0.00 0.00 0.00 2.59
243 244 2.739913 GCCAAAAGTGTGCGTGTATCTA 59.260 45.455 0.00 0.00 0.00 1.98
244 245 1.535462 GCCAAAAGTGTGCGTGTATCT 59.465 47.619 0.00 0.00 0.00 1.98
245 246 1.724654 CGCCAAAAGTGTGCGTGTATC 60.725 52.381 0.00 0.00 38.69 2.24
246 247 0.237235 CGCCAAAAGTGTGCGTGTAT 59.763 50.000 0.00 0.00 38.69 2.29
247 248 1.644372 CGCCAAAAGTGTGCGTGTA 59.356 52.632 0.00 0.00 38.69 2.90
248 249 2.407210 CGCCAAAAGTGTGCGTGT 59.593 55.556 0.00 0.00 38.69 4.49
251 252 1.141645 TAGTACGCCAAAAGTGTGCG 58.858 50.000 1.14 1.14 45.24 5.34
252 253 2.095919 CCTTAGTACGCCAAAAGTGTGC 60.096 50.000 0.00 0.00 40.22 4.57
253 254 2.482721 CCCTTAGTACGCCAAAAGTGTG 59.517 50.000 0.00 0.00 40.22 3.82
254 255 2.369532 TCCCTTAGTACGCCAAAAGTGT 59.630 45.455 0.00 0.00 43.23 3.55
255 256 2.740447 GTCCCTTAGTACGCCAAAAGTG 59.260 50.000 0.00 0.00 0.00 3.16
256 257 2.636403 AGTCCCTTAGTACGCCAAAAGT 59.364 45.455 0.00 0.00 0.00 2.66
257 258 3.000727 CAGTCCCTTAGTACGCCAAAAG 58.999 50.000 0.00 0.00 0.00 2.27
258 259 2.369532 ACAGTCCCTTAGTACGCCAAAA 59.630 45.455 0.00 0.00 0.00 2.44
259 260 1.972795 ACAGTCCCTTAGTACGCCAAA 59.027 47.619 0.00 0.00 0.00 3.28
260 261 1.636148 ACAGTCCCTTAGTACGCCAA 58.364 50.000 0.00 0.00 0.00 4.52
261 262 1.636148 AACAGTCCCTTAGTACGCCA 58.364 50.000 0.00 0.00 0.00 5.69
262 263 2.344025 CAAACAGTCCCTTAGTACGCC 58.656 52.381 0.00 0.00 0.00 5.68
263 264 2.289257 ACCAAACAGTCCCTTAGTACGC 60.289 50.000 0.00 0.00 0.00 4.42
264 265 3.672767 ACCAAACAGTCCCTTAGTACG 57.327 47.619 0.00 0.00 0.00 3.67
265 266 4.517832 CCAAACCAAACAGTCCCTTAGTAC 59.482 45.833 0.00 0.00 0.00 2.73
266 267 4.721132 CCAAACCAAACAGTCCCTTAGTA 58.279 43.478 0.00 0.00 0.00 1.82
267 268 3.562182 CCAAACCAAACAGTCCCTTAGT 58.438 45.455 0.00 0.00 0.00 2.24
268 269 2.296190 GCCAAACCAAACAGTCCCTTAG 59.704 50.000 0.00 0.00 0.00 2.18
269 270 2.312390 GCCAAACCAAACAGTCCCTTA 58.688 47.619 0.00 0.00 0.00 2.69
270 271 1.119684 GCCAAACCAAACAGTCCCTT 58.880 50.000 0.00 0.00 0.00 3.95
271 272 0.032615 TGCCAAACCAAACAGTCCCT 60.033 50.000 0.00 0.00 0.00 4.20
272 273 0.827368 TTGCCAAACCAAACAGTCCC 59.173 50.000 0.00 0.00 0.00 4.46
273 274 2.682155 TTTGCCAAACCAAACAGTCC 57.318 45.000 0.00 0.00 30.28 3.85
274 275 5.331098 CAATTTTTGCCAAACCAAACAGTC 58.669 37.500 0.00 0.00 34.68 3.51
275 276 5.307926 CAATTTTTGCCAAACCAAACAGT 57.692 34.783 0.00 0.00 34.68 3.55
289 290 6.146021 GTGGTTCTTAGATGTGGCAATTTTTG 59.854 38.462 0.00 0.00 0.00 2.44
290 291 6.183360 TGTGGTTCTTAGATGTGGCAATTTTT 60.183 34.615 0.00 0.00 0.00 1.94
291 292 5.304101 TGTGGTTCTTAGATGTGGCAATTTT 59.696 36.000 0.00 0.00 0.00 1.82
292 293 4.832266 TGTGGTTCTTAGATGTGGCAATTT 59.168 37.500 0.00 0.00 0.00 1.82
293 294 4.406456 TGTGGTTCTTAGATGTGGCAATT 58.594 39.130 0.00 0.00 0.00 2.32
294 295 4.032960 TGTGGTTCTTAGATGTGGCAAT 57.967 40.909 0.00 0.00 0.00 3.56
295 296 3.500448 TGTGGTTCTTAGATGTGGCAA 57.500 42.857 0.00 0.00 0.00 4.52
296 297 3.719268 ATGTGGTTCTTAGATGTGGCA 57.281 42.857 0.00 0.00 0.00 4.92
297 298 5.880332 TCTAAATGTGGTTCTTAGATGTGGC 59.120 40.000 0.00 0.00 28.94 5.01
298 299 6.316390 GGTCTAAATGTGGTTCTTAGATGTGG 59.684 42.308 0.00 0.00 34.93 4.17
299 300 6.316390 GGGTCTAAATGTGGTTCTTAGATGTG 59.684 42.308 0.00 0.00 34.93 3.21
300 301 6.415573 GGGTCTAAATGTGGTTCTTAGATGT 58.584 40.000 0.00 0.00 34.93 3.06
301 302 5.823045 GGGGTCTAAATGTGGTTCTTAGATG 59.177 44.000 0.00 0.00 34.93 2.90
302 303 5.491078 TGGGGTCTAAATGTGGTTCTTAGAT 59.509 40.000 0.00 0.00 34.93 1.98
303 304 4.847512 TGGGGTCTAAATGTGGTTCTTAGA 59.152 41.667 0.00 0.00 30.95 2.10
304 305 5.174037 TGGGGTCTAAATGTGGTTCTTAG 57.826 43.478 0.00 0.00 0.00 2.18
305 306 5.789574 ATGGGGTCTAAATGTGGTTCTTA 57.210 39.130 0.00 0.00 0.00 2.10
306 307 4.675063 ATGGGGTCTAAATGTGGTTCTT 57.325 40.909 0.00 0.00 0.00 2.52
307 308 5.399038 CCATATGGGGTCTAAATGTGGTTCT 60.399 44.000 14.52 0.00 30.35 3.01
308 309 4.827284 CCATATGGGGTCTAAATGTGGTTC 59.173 45.833 14.52 0.00 30.35 3.62
309 310 4.803452 CCATATGGGGTCTAAATGTGGTT 58.197 43.478 14.52 0.00 30.35 3.67
310 311 3.436470 GCCATATGGGGTCTAAATGTGGT 60.436 47.826 23.30 0.00 35.61 4.16
311 312 3.157087 GCCATATGGGGTCTAAATGTGG 58.843 50.000 23.30 0.00 36.10 4.17
312 313 3.831323 TGCCATATGGGGTCTAAATGTG 58.169 45.455 23.30 0.00 37.04 3.21
313 314 4.747265 ATGCCATATGGGGTCTAAATGT 57.253 40.909 23.30 0.00 37.04 2.71
314 315 5.882557 GTCTATGCCATATGGGGTCTAAATG 59.117 44.000 23.30 0.00 37.04 2.32
315 316 5.551583 TGTCTATGCCATATGGGGTCTAAAT 59.448 40.000 23.30 0.02 37.04 1.40
316 317 4.910913 TGTCTATGCCATATGGGGTCTAAA 59.089 41.667 23.30 0.00 37.04 1.85
317 318 4.286032 GTGTCTATGCCATATGGGGTCTAA 59.714 45.833 23.30 0.00 37.04 2.10
318 319 3.838317 GTGTCTATGCCATATGGGGTCTA 59.162 47.826 23.30 0.00 37.04 2.59
319 320 2.639839 GTGTCTATGCCATATGGGGTCT 59.360 50.000 23.30 0.53 37.04 3.85
320 321 2.371841 TGTGTCTATGCCATATGGGGTC 59.628 50.000 23.30 7.37 37.04 4.46
321 322 2.417652 TGTGTCTATGCCATATGGGGT 58.582 47.619 23.30 0.00 37.04 4.95
322 323 3.507162 TTGTGTCTATGCCATATGGGG 57.493 47.619 23.30 0.00 37.04 4.96
323 324 5.360714 ACTTTTTGTGTCTATGCCATATGGG 59.639 40.000 23.30 6.64 40.85 4.00
324 325 6.267817 CACTTTTTGTGTCTATGCCATATGG 58.732 40.000 18.07 18.07 41.53 2.74
339 340 3.530535 GGAACATTGCCACACTTTTTGT 58.469 40.909 0.00 0.00 39.97 2.83
340 341 2.871633 GGGAACATTGCCACACTTTTTG 59.128 45.455 0.00 0.00 38.72 2.44
341 342 2.771372 AGGGAACATTGCCACACTTTTT 59.229 40.909 4.87 0.00 41.75 1.94
342 343 2.397597 AGGGAACATTGCCACACTTTT 58.602 42.857 4.87 0.00 41.75 2.27
343 344 2.086610 AGGGAACATTGCCACACTTT 57.913 45.000 4.87 0.00 41.75 2.66
344 345 2.086610 AAGGGAACATTGCCACACTT 57.913 45.000 4.87 0.00 41.75 3.16
345 346 2.555227 CCTAAGGGAACATTGCCACACT 60.555 50.000 4.87 0.00 41.75 3.55
346 347 1.818674 CCTAAGGGAACATTGCCACAC 59.181 52.381 4.87 0.00 41.75 3.82
347 348 1.890573 GCCTAAGGGAACATTGCCACA 60.891 52.381 4.87 0.00 41.75 4.17
348 349 0.817654 GCCTAAGGGAACATTGCCAC 59.182 55.000 4.87 0.00 41.75 5.01
349 350 0.704076 AGCCTAAGGGAACATTGCCA 59.296 50.000 4.87 0.00 41.75 4.92
350 351 1.478105 CAAGCCTAAGGGAACATTGCC 59.522 52.381 0.00 0.00 39.23 4.52
351 352 2.164422 GACAAGCCTAAGGGAACATTGC 59.836 50.000 0.00 0.00 33.58 3.56
352 353 3.420893 TGACAAGCCTAAGGGAACATTG 58.579 45.455 0.00 0.00 33.58 2.82
353 354 3.806949 TGACAAGCCTAAGGGAACATT 57.193 42.857 0.00 0.00 33.58 2.71
354 355 3.074538 AGTTGACAAGCCTAAGGGAACAT 59.925 43.478 0.00 0.00 33.58 2.71
355 356 2.441750 AGTTGACAAGCCTAAGGGAACA 59.558 45.455 0.00 0.00 33.58 3.18
356 357 3.141767 AGTTGACAAGCCTAAGGGAAC 57.858 47.619 0.00 0.00 33.58 3.62
357 358 3.117663 ACAAGTTGACAAGCCTAAGGGAA 60.118 43.478 10.54 0.00 33.58 3.97
358 359 2.441750 ACAAGTTGACAAGCCTAAGGGA 59.558 45.455 10.54 0.00 33.58 4.20
359 360 2.554032 CACAAGTTGACAAGCCTAAGGG 59.446 50.000 10.54 0.00 0.00 3.95
360 361 2.554032 CCACAAGTTGACAAGCCTAAGG 59.446 50.000 10.54 0.00 0.00 2.69
361 362 2.030805 GCCACAAGTTGACAAGCCTAAG 60.031 50.000 10.54 0.00 0.00 2.18
362 363 1.953686 GCCACAAGTTGACAAGCCTAA 59.046 47.619 10.54 0.00 0.00 2.69
363 364 1.142870 AGCCACAAGTTGACAAGCCTA 59.857 47.619 10.54 0.00 0.00 3.93
364 365 0.106519 AGCCACAAGTTGACAAGCCT 60.107 50.000 10.54 0.00 0.00 4.58
365 366 0.746659 AAGCCACAAGTTGACAAGCC 59.253 50.000 10.54 0.00 0.00 4.35
366 367 2.159254 TGAAAGCCACAAGTTGACAAGC 60.159 45.455 10.54 6.48 0.00 4.01
367 368 3.781079 TGAAAGCCACAAGTTGACAAG 57.219 42.857 10.54 0.00 0.00 3.16
368 369 4.734398 AATGAAAGCCACAAGTTGACAA 57.266 36.364 10.54 0.00 0.00 3.18
369 370 4.734398 AAATGAAAGCCACAAGTTGACA 57.266 36.364 10.54 0.00 0.00 3.58
370 371 5.108517 TCAAAATGAAAGCCACAAGTTGAC 58.891 37.500 10.54 0.00 0.00 3.18
371 372 5.336150 TCAAAATGAAAGCCACAAGTTGA 57.664 34.783 10.54 0.00 0.00 3.18
372 373 5.754406 TCATCAAAATGAAAGCCACAAGTTG 59.246 36.000 0.00 0.00 38.97 3.16
373 374 5.916318 TCATCAAAATGAAAGCCACAAGTT 58.084 33.333 0.00 0.00 38.97 2.66
374 375 5.534207 TCATCAAAATGAAAGCCACAAGT 57.466 34.783 0.00 0.00 38.97 3.16
385 386 8.806429 TGCCTAAGATTAGTTCATCAAAATGA 57.194 30.769 0.00 0.00 40.18 2.57
386 387 9.512435 CTTGCCTAAGATTAGTTCATCAAAATG 57.488 33.333 0.00 0.00 35.92 2.32
387 388 9.247861 ACTTGCCTAAGATTAGTTCATCAAAAT 57.752 29.630 0.00 0.00 37.36 1.82
388 389 8.635765 ACTTGCCTAAGATTAGTTCATCAAAA 57.364 30.769 0.00 0.00 37.36 2.44
389 390 8.635765 AACTTGCCTAAGATTAGTTCATCAAA 57.364 30.769 0.00 0.00 37.36 2.69
390 391 8.514594 CAAACTTGCCTAAGATTAGTTCATCAA 58.485 33.333 0.00 0.00 37.36 2.57
391 392 7.882791 TCAAACTTGCCTAAGATTAGTTCATCA 59.117 33.333 0.00 0.00 37.36 3.07
392 393 8.178313 GTCAAACTTGCCTAAGATTAGTTCATC 58.822 37.037 0.00 0.00 37.36 2.92
393 394 7.665559 TGTCAAACTTGCCTAAGATTAGTTCAT 59.334 33.333 0.00 0.00 37.36 2.57
394 395 6.995686 TGTCAAACTTGCCTAAGATTAGTTCA 59.004 34.615 0.00 0.00 37.36 3.18
395 396 7.435068 TGTCAAACTTGCCTAAGATTAGTTC 57.565 36.000 0.00 0.00 37.36 3.01
396 397 7.817418 TTGTCAAACTTGCCTAAGATTAGTT 57.183 32.000 0.00 0.00 37.36 2.24
397 398 7.817418 TTTGTCAAACTTGCCTAAGATTAGT 57.183 32.000 0.00 0.00 37.36 2.24
421 422 3.269178 CCACACTTTGCCACACATTTTT 58.731 40.909 0.00 0.00 0.00 1.94
422 423 2.903798 CCACACTTTGCCACACATTTT 58.096 42.857 0.00 0.00 0.00 1.82
423 424 1.473080 GCCACACTTTGCCACACATTT 60.473 47.619 0.00 0.00 0.00 2.32
424 425 0.104671 GCCACACTTTGCCACACATT 59.895 50.000 0.00 0.00 0.00 2.71
425 426 1.042003 TGCCACACTTTGCCACACAT 61.042 50.000 0.00 0.00 0.00 3.21
426 427 1.253593 TTGCCACACTTTGCCACACA 61.254 50.000 0.00 0.00 0.00 3.72
427 428 0.104671 ATTGCCACACTTTGCCACAC 59.895 50.000 0.00 0.00 0.00 3.82
428 429 0.104487 CATTGCCACACTTTGCCACA 59.896 50.000 0.00 0.00 0.00 4.17
429 430 1.223417 GCATTGCCACACTTTGCCAC 61.223 55.000 0.00 0.00 0.00 5.01
430 431 1.069427 GCATTGCCACACTTTGCCA 59.931 52.632 0.00 0.00 0.00 4.92
431 432 0.602562 TAGCATTGCCACACTTTGCC 59.397 50.000 4.70 0.00 33.85 4.52
432 433 1.270550 ACTAGCATTGCCACACTTTGC 59.729 47.619 4.70 0.00 0.00 3.68
433 434 2.095059 GGACTAGCATTGCCACACTTTG 60.095 50.000 4.70 0.00 0.00 2.77
434 435 2.162681 GGACTAGCATTGCCACACTTT 58.837 47.619 4.70 0.00 0.00 2.66
435 436 1.352352 AGGACTAGCATTGCCACACTT 59.648 47.619 4.70 0.00 0.00 3.16
436 437 0.987294 AGGACTAGCATTGCCACACT 59.013 50.000 4.70 0.00 0.00 3.55
437 438 2.691409 TAGGACTAGCATTGCCACAC 57.309 50.000 4.70 0.00 0.00 3.82
438 439 3.712016 TTTAGGACTAGCATTGCCACA 57.288 42.857 4.70 0.00 0.00 4.17
439 440 4.640201 TGATTTTAGGACTAGCATTGCCAC 59.360 41.667 4.70 0.00 0.00 5.01
440 441 4.854173 TGATTTTAGGACTAGCATTGCCA 58.146 39.130 4.70 0.00 0.00 4.92
441 442 5.835113 TTGATTTTAGGACTAGCATTGCC 57.165 39.130 4.70 0.00 0.00 4.52
442 443 6.620678 TGTTTGATTTTAGGACTAGCATTGC 58.379 36.000 0.00 0.00 0.00 3.56
443 444 6.749118 GCTGTTTGATTTTAGGACTAGCATTG 59.251 38.462 0.00 0.00 0.00 2.82
444 445 6.127619 GGCTGTTTGATTTTAGGACTAGCATT 60.128 38.462 0.00 0.00 0.00 3.56
445 446 5.358160 GGCTGTTTGATTTTAGGACTAGCAT 59.642 40.000 0.00 0.00 0.00 3.79
446 447 4.700213 GGCTGTTTGATTTTAGGACTAGCA 59.300 41.667 0.00 0.00 0.00 3.49
447 448 4.096532 GGGCTGTTTGATTTTAGGACTAGC 59.903 45.833 0.00 0.00 0.00 3.42
448 449 4.640647 GGGGCTGTTTGATTTTAGGACTAG 59.359 45.833 0.00 0.00 0.00 2.57
449 450 4.291249 AGGGGCTGTTTGATTTTAGGACTA 59.709 41.667 0.00 0.00 0.00 2.59
450 451 3.076032 AGGGGCTGTTTGATTTTAGGACT 59.924 43.478 0.00 0.00 0.00 3.85
451 452 3.431415 AGGGGCTGTTTGATTTTAGGAC 58.569 45.455 0.00 0.00 0.00 3.85
452 453 3.825908 AGGGGCTGTTTGATTTTAGGA 57.174 42.857 0.00 0.00 0.00 2.94
453 454 5.016831 ACTTAGGGGCTGTTTGATTTTAGG 58.983 41.667 0.00 0.00 0.00 2.69
454 455 6.590234 AACTTAGGGGCTGTTTGATTTTAG 57.410 37.500 0.00 0.00 0.00 1.85
455 456 6.152154 GCTAACTTAGGGGCTGTTTGATTTTA 59.848 38.462 0.00 0.00 0.00 1.52
456 457 5.047306 GCTAACTTAGGGGCTGTTTGATTTT 60.047 40.000 0.00 0.00 0.00 1.82
457 458 4.462834 GCTAACTTAGGGGCTGTTTGATTT 59.537 41.667 0.00 0.00 0.00 2.17
458 459 4.017126 GCTAACTTAGGGGCTGTTTGATT 58.983 43.478 0.00 0.00 0.00 2.57
459 460 3.010138 TGCTAACTTAGGGGCTGTTTGAT 59.990 43.478 0.00 0.00 0.00 2.57
460 461 2.373836 TGCTAACTTAGGGGCTGTTTGA 59.626 45.455 0.00 0.00 0.00 2.69
461 462 2.790433 TGCTAACTTAGGGGCTGTTTG 58.210 47.619 0.00 0.00 0.00 2.93
462 463 3.181433 ACTTGCTAACTTAGGGGCTGTTT 60.181 43.478 0.00 0.00 0.00 2.83
463 464 2.375509 ACTTGCTAACTTAGGGGCTGTT 59.624 45.455 0.00 0.00 0.00 3.16
464 465 1.985895 ACTTGCTAACTTAGGGGCTGT 59.014 47.619 0.00 0.00 0.00 4.40
465 466 2.789409 ACTTGCTAACTTAGGGGCTG 57.211 50.000 0.00 0.00 0.00 4.85
466 467 3.585732 TGTAACTTGCTAACTTAGGGGCT 59.414 43.478 0.00 0.00 0.00 5.19
467 468 3.939592 CTGTAACTTGCTAACTTAGGGGC 59.060 47.826 0.00 0.00 0.00 5.80
468 469 5.161943 ACTGTAACTTGCTAACTTAGGGG 57.838 43.478 0.00 0.00 0.00 4.79
469 470 6.148976 GGAAACTGTAACTTGCTAACTTAGGG 59.851 42.308 0.00 0.00 0.00 3.53
470 471 6.708949 TGGAAACTGTAACTTGCTAACTTAGG 59.291 38.462 0.00 0.00 0.00 2.69
471 472 7.225931 TGTGGAAACTGTAACTTGCTAACTTAG 59.774 37.037 0.00 0.00 0.00 2.18
472 473 7.049133 TGTGGAAACTGTAACTTGCTAACTTA 58.951 34.615 0.00 0.00 0.00 2.24
473 474 5.883673 TGTGGAAACTGTAACTTGCTAACTT 59.116 36.000 0.00 0.00 0.00 2.66
474 475 5.433526 TGTGGAAACTGTAACTTGCTAACT 58.566 37.500 0.00 0.00 0.00 2.24
475 476 5.744666 TGTGGAAACTGTAACTTGCTAAC 57.255 39.130 0.00 0.00 0.00 2.34
476 477 6.600032 TCTTTGTGGAAACTGTAACTTGCTAA 59.400 34.615 0.00 0.00 0.00 3.09
477 478 6.116806 TCTTTGTGGAAACTGTAACTTGCTA 58.883 36.000 0.00 0.00 0.00 3.49
478 479 4.947388 TCTTTGTGGAAACTGTAACTTGCT 59.053 37.500 0.00 0.00 0.00 3.91
479 480 5.243426 TCTTTGTGGAAACTGTAACTTGC 57.757 39.130 0.00 0.00 0.00 4.01
480 481 8.527567 TTTTTCTTTGTGGAAACTGTAACTTG 57.472 30.769 0.00 0.00 35.31 3.16
503 504 8.682936 AGTAGAGATGTGACTTGTCAATTTTT 57.317 30.769 4.93 0.00 0.00 1.94
504 505 9.209175 GTAGTAGAGATGTGACTTGTCAATTTT 57.791 33.333 4.93 0.00 0.00 1.82
505 506 8.589338 AGTAGTAGAGATGTGACTTGTCAATTT 58.411 33.333 4.93 0.00 0.00 1.82
506 507 8.128322 AGTAGTAGAGATGTGACTTGTCAATT 57.872 34.615 4.93 0.00 0.00 2.32
507 508 7.710676 AGTAGTAGAGATGTGACTTGTCAAT 57.289 36.000 4.93 2.31 0.00 2.57
508 509 8.809468 ATAGTAGTAGAGATGTGACTTGTCAA 57.191 34.615 4.93 0.00 0.00 3.18
509 510 8.809468 AATAGTAGTAGAGATGTGACTTGTCA 57.191 34.615 0.00 0.00 0.00 3.58
517 518 9.803315 TGCTTGTTTAATAGTAGTAGAGATGTG 57.197 33.333 0.00 0.00 0.00 3.21
593 594 2.467880 TCGGGAGGCTGTAATTTCTCT 58.532 47.619 0.00 0.00 0.00 3.10
778 780 4.324563 CGCTAATTGGGGATGGGATTAGAT 60.325 45.833 0.00 0.00 0.00 1.98
822 825 2.347322 GGAGCAGAGCTGAGACCGT 61.347 63.158 0.85 0.00 39.88 4.83
915 926 4.147449 CTCCTGCCGCCGATGACA 62.147 66.667 0.00 0.00 0.00 3.58
1120 1142 3.077556 GAGGGAGCGGAGAAGGCA 61.078 66.667 0.00 0.00 0.00 4.75
1130 1154 2.359169 TGGTCACGATGGAGGGAGC 61.359 63.158 0.00 0.00 0.00 4.70
1131 1155 1.257750 TGTGGTCACGATGGAGGGAG 61.258 60.000 0.00 0.00 0.00 4.30
1195 1219 4.635223 CAGACCTCAGTGATGAAGTTCAA 58.365 43.478 10.14 0.00 0.00 2.69
1271 1295 2.394563 GCCCACTTCTTGAGCGCTC 61.395 63.158 30.42 30.42 0.00 5.03
1417 1445 3.517500 GAGGATAGGCAATTAGCTAGGCT 59.482 47.826 11.54 11.54 44.79 4.58
1444 1472 0.955919 GGCTGTCCGAACCAAGAAGG 60.956 60.000 0.00 0.00 45.67 3.46
1496 1531 0.683412 GGTGGACCAAGAACCGTACT 59.317 55.000 0.00 0.00 35.64 2.73
1525 1560 5.316158 AGCAAGCATTCCTAATCCAGTAT 57.684 39.130 0.00 0.00 0.00 2.12
1590 1625 6.511767 GCATGATACCGAGAAAATTCACGATT 60.512 38.462 13.33 4.14 42.55 3.34
1907 2417 8.704234 CAGAAAATAGCTACCGATTATGAGAAC 58.296 37.037 0.00 0.00 0.00 3.01
2257 2773 6.014925 GGGTAAATTGGTTGTATTTGGACAGT 60.015 38.462 0.00 0.00 0.00 3.55
2344 2860 5.104374 CACAAAACAGCAACACAGATTCTT 58.896 37.500 0.00 0.00 0.00 2.52
2376 2918 6.446318 GTGGTTCTTGAAATTGCTTGTCATA 58.554 36.000 0.00 0.00 0.00 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.