Multiple sequence alignment - TraesCS3A01G192200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G192200 chr3A 100.000 4885 0 0 1 4885 248545309 248550193 0.000000e+00 9022.0
1 TraesCS3A01G192200 chr3A 92.727 55 3 1 1982 2036 639422949 639422896 1.460000e-10 78.7
2 TraesCS3A01G192200 chr3B 93.579 1355 30 22 1405 2722 273241208 273239874 0.000000e+00 1967.0
3 TraesCS3A01G192200 chr3B 89.113 1387 42 37 2801 4113 273239429 273238078 0.000000e+00 1624.0
4 TraesCS3A01G192200 chr3B 90.376 1091 21 20 84 1135 273242597 273241552 0.000000e+00 1356.0
5 TraesCS3A01G192200 chr3B 83.987 612 65 15 4103 4691 273236292 273235691 1.540000e-154 556.0
6 TraesCS3A01G192200 chr3B 86.822 129 5 7 1256 1384 273241403 273241287 3.070000e-27 134.0
7 TraesCS3A01G192200 chr3B 90.741 54 0 3 1136 1184 273241499 273241446 3.160000e-07 67.6
8 TraesCS3A01G192200 chr3D 95.790 1164 25 9 2229 3382 189039238 189038089 0.000000e+00 1857.0
9 TraesCS3A01G192200 chr3D 90.838 1146 35 21 1 1135 189041599 189040513 0.000000e+00 1471.0
10 TraesCS3A01G192200 chr3D 98.589 567 8 0 1405 1971 189040134 189039568 0.000000e+00 1003.0
11 TraesCS3A01G192200 chr3D 85.773 977 35 25 3401 4332 189038031 189037114 0.000000e+00 939.0
12 TraesCS3A01G192200 chr3D 88.830 376 39 3 4512 4885 189031991 189031617 4.460000e-125 459.0
13 TraesCS3A01G192200 chr3D 98.193 166 0 3 2045 2207 189039502 189039337 2.230000e-73 287.0
14 TraesCS3A01G192200 chr3D 78.862 246 19 18 1139 1383 189040453 189040240 8.530000e-28 135.0
15 TraesCS3A01G192200 chr1A 77.657 461 70 21 4429 4865 587809401 587808950 2.920000e-62 250.0
16 TraesCS3A01G192200 chr1A 81.992 261 34 9 4416 4671 29999264 29999516 4.950000e-50 209.0
17 TraesCS3A01G192200 chr1B 79.064 406 44 29 4420 4795 78066338 78065944 1.760000e-59 241.0
18 TraesCS3A01G192200 chr1B 89.474 57 6 0 1978 2034 645520744 645520800 6.780000e-09 73.1
19 TraesCS3A01G192200 chr5B 77.852 447 58 28 4413 4829 711045601 711045166 6.320000e-59 239.0
20 TraesCS3A01G192200 chr5B 92.453 53 2 2 1984 2036 662076257 662076207 1.890000e-09 75.0
21 TraesCS3A01G192200 chr2B 82.397 267 36 9 4408 4671 637874149 637874407 6.360000e-54 222.0
22 TraesCS3A01G192200 chr2B 77.976 168 37 0 4698 4865 641683878 641684045 6.690000e-19 106.0
23 TraesCS3A01G192200 chr2B 88.235 68 3 5 1970 2037 794231007 794230945 5.240000e-10 76.8
24 TraesCS3A01G192200 chr7D 76.942 399 66 21 4420 4808 569707929 569707547 2.310000e-48 204.0
25 TraesCS3A01G192200 chr7D 95.455 44 2 0 1993 2036 39143262 39143219 2.440000e-08 71.3
26 TraesCS3A01G192200 chr4D 77.023 383 70 12 4417 4790 308777672 308778045 2.310000e-48 204.0
27 TraesCS3A01G192200 chr6B 76.823 384 69 17 4416 4790 6316961 6316589 1.070000e-46 198.0
28 TraesCS3A01G192200 chr6D 92.982 57 1 2 1982 2037 315956200 315956146 4.050000e-11 80.5
29 TraesCS3A01G192200 chr2D 91.071 56 2 3 1983 2038 381901399 381901451 6.780000e-09 73.1
30 TraesCS3A01G192200 chr2A 87.692 65 3 5 1974 2038 761126553 761126612 2.440000e-08 71.3
31 TraesCS3A01G192200 chr4B 100.000 31 0 0 733 763 660110447 660110477 1.900000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G192200 chr3A 248545309 248550193 4884 False 9022.000000 9022 100.000000 1 4885 1 chr3A.!!$F1 4884
1 TraesCS3A01G192200 chr3B 273235691 273242597 6906 True 950.766667 1967 89.103000 84 4691 6 chr3B.!!$R1 4607
2 TraesCS3A01G192200 chr3D 189037114 189041599 4485 True 948.666667 1857 91.340833 1 4332 6 chr3D.!!$R2 4331

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
589 599 0.679002 AGCAGTGTGATGTGCCATCC 60.679 55.0 11.25 5.28 40.81 3.51 F
1214 1321 0.250901 TTTCTCTTGACTGGCCCAGC 60.251 55.0 11.63 4.33 34.37 4.85 F
1393 1526 0.321122 CCAGTCCCAGTGAAGCACTC 60.321 60.0 0.00 0.00 43.43 3.51 F
1394 1527 0.683973 CAGTCCCAGTGAAGCACTCT 59.316 55.0 0.00 0.00 43.43 3.24 F
3202 3919 0.745128 TGCAACCGTTGGTTCGTCTT 60.745 50.0 13.12 0.00 43.05 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1989 2228 1.068250 GGGCGATCCTCCTTCTTCG 59.932 63.158 0.00 0.0 34.83 3.79 R
3202 3919 0.031857 TTCGAGAACCGTTGGCGTTA 59.968 50.000 0.00 0.0 39.75 3.18 R
3334 4051 1.139853 GAGAGGCATACAAGAGGTGGG 59.860 57.143 0.00 0.0 0.00 4.61 R
3384 4103 3.091633 AGAAACATGCCCACATAAGCT 57.908 42.857 0.00 0.0 33.67 3.74 R
4278 6890 0.250510 TGGCAGCCATACGAACAACA 60.251 50.000 11.22 0.0 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 4.665212 AGCATCGACACATAATGCAAAAG 58.335 39.130 7.57 0.00 46.43 2.27
41 42 4.023279 TCGACACATAATGCAAAAGCTGTT 60.023 37.500 0.00 0.00 0.00 3.16
47 48 1.999648 ATGCAAAAGCTGTTGGAGGA 58.000 45.000 18.35 0.00 31.94 3.71
49 50 1.614903 TGCAAAAGCTGTTGGAGGATG 59.385 47.619 18.35 0.00 0.00 3.51
51 52 2.819608 GCAAAAGCTGTTGGAGGATGTA 59.180 45.455 18.35 0.00 0.00 2.29
77 78 6.659242 TCCCCAAGAGAAAAGAAATGTGATAC 59.341 38.462 0.00 0.00 0.00 2.24
78 79 6.660949 CCCCAAGAGAAAAGAAATGTGATACT 59.339 38.462 0.00 0.00 0.00 2.12
79 80 7.829211 CCCCAAGAGAAAAGAAATGTGATACTA 59.171 37.037 0.00 0.00 0.00 1.82
80 81 8.669243 CCCAAGAGAAAAGAAATGTGATACTAC 58.331 37.037 0.00 0.00 0.00 2.73
81 82 9.442047 CCAAGAGAAAAGAAATGTGATACTACT 57.558 33.333 0.00 0.00 0.00 2.57
209 210 7.976734 ACACATCATTTTCAGCTAGACTAGTAC 59.023 37.037 11.15 0.00 0.00 2.73
210 211 8.194104 CACATCATTTTCAGCTAGACTAGTACT 58.806 37.037 11.15 0.00 0.00 2.73
211 212 9.409918 ACATCATTTTCAGCTAGACTAGTACTA 57.590 33.333 11.15 1.89 0.00 1.82
212 213 9.891828 CATCATTTTCAGCTAGACTAGTACTAG 57.108 37.037 25.30 25.30 39.92 2.57
214 215 8.894731 TCATTTTCAGCTAGACTAGTACTAGTG 58.105 37.037 34.67 22.81 45.63 2.74
215 216 8.894731 CATTTTCAGCTAGACTAGTACTAGTGA 58.105 37.037 34.67 22.64 45.63 3.41
216 217 7.846644 TTTCAGCTAGACTAGTACTAGTGAC 57.153 40.000 34.67 22.72 45.63 3.67
232 233 3.100671 AGTGACTAGTCCATCCTCCAAC 58.899 50.000 20.11 8.10 0.00 3.77
242 243 2.749621 CCATCCTCCAACGAAAGGAAAG 59.250 50.000 0.00 0.00 44.61 2.62
297 299 1.341156 CCCCGCCAAGAGAGGAAGAT 61.341 60.000 0.00 0.00 0.00 2.40
299 301 1.342819 CCCGCCAAGAGAGGAAGATAG 59.657 57.143 0.00 0.00 0.00 2.08
301 303 2.295909 CCGCCAAGAGAGGAAGATAGAG 59.704 54.545 0.00 0.00 0.00 2.43
302 304 3.218453 CGCCAAGAGAGGAAGATAGAGA 58.782 50.000 0.00 0.00 0.00 3.10
305 307 5.356426 GCCAAGAGAGGAAGATAGAGAAAC 58.644 45.833 0.00 0.00 0.00 2.78
366 370 3.214328 TCCTTTCTTTCTTGCTGTGTCC 58.786 45.455 0.00 0.00 0.00 4.02
367 371 2.031682 CCTTTCTTTCTTGCTGTGTCCG 60.032 50.000 0.00 0.00 0.00 4.79
368 372 0.944386 TTCTTTCTTGCTGTGTCCGC 59.056 50.000 0.00 0.00 0.00 5.54
369 373 0.884704 TCTTTCTTGCTGTGTCCGCC 60.885 55.000 0.00 0.00 0.00 6.13
531 536 2.484928 GCCCGTCGGTACTCCTACC 61.485 68.421 11.06 0.00 39.45 3.18
532 537 1.077501 CCCGTCGGTACTCCTACCA 60.078 63.158 11.06 0.00 42.66 3.25
535 543 1.134401 CCGTCGGTACTCCTACCACTA 60.134 57.143 2.08 0.00 42.66 2.74
538 546 3.202097 GTCGGTACTCCTACCACTACTC 58.798 54.545 0.00 0.00 42.66 2.59
586 596 2.501316 AGTATAGCAGTGTGATGTGCCA 59.499 45.455 0.00 0.00 40.81 4.92
587 597 2.723322 ATAGCAGTGTGATGTGCCAT 57.277 45.000 0.00 0.00 40.81 4.40
588 598 2.028420 TAGCAGTGTGATGTGCCATC 57.972 50.000 7.90 7.90 40.81 3.51
589 599 0.679002 AGCAGTGTGATGTGCCATCC 60.679 55.000 11.25 5.28 40.81 3.51
590 600 0.961857 GCAGTGTGATGTGCCATCCA 60.962 55.000 11.25 7.22 33.29 3.41
591 601 1.758936 CAGTGTGATGTGCCATCCAT 58.241 50.000 11.25 0.00 0.00 3.41
592 602 1.674441 CAGTGTGATGTGCCATCCATC 59.326 52.381 11.25 4.78 39.32 3.51
593 603 1.027357 GTGTGATGTGCCATCCATCC 58.973 55.000 11.25 0.91 38.32 3.51
721 738 2.649312 ACCCATCTTTTCCTGTCCATGA 59.351 45.455 0.00 0.00 0.00 3.07
759 792 5.720041 GGATGGATGGATGGATTGATTGATT 59.280 40.000 0.00 0.00 0.00 2.57
760 793 6.351033 GGATGGATGGATGGATTGATTGATTG 60.351 42.308 0.00 0.00 0.00 2.67
761 794 5.707495 TGGATGGATGGATTGATTGATTGA 58.293 37.500 0.00 0.00 0.00 2.57
762 795 6.319715 TGGATGGATGGATTGATTGATTGAT 58.680 36.000 0.00 0.00 0.00 2.57
763 796 6.436218 TGGATGGATGGATTGATTGATTGATC 59.564 38.462 0.00 0.00 0.00 2.92
847 880 1.010793 TCCTCTCCTCTCCTCTCCTCT 59.989 57.143 0.00 0.00 0.00 3.69
848 881 1.421646 CCTCTCCTCTCCTCTCCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
849 882 1.421646 CTCTCCTCTCCTCTCCTCTCC 59.578 61.905 0.00 0.00 0.00 3.71
850 883 1.010793 TCTCCTCTCCTCTCCTCTCCT 59.989 57.143 0.00 0.00 0.00 3.69
851 884 2.251605 TCTCCTCTCCTCTCCTCTCCTA 59.748 54.545 0.00 0.00 0.00 2.94
915 948 6.239572 CCTCTTTCTCTTTCCATATCCTCCTC 60.240 46.154 0.00 0.00 0.00 3.71
919 952 2.975489 TCTTTCCATATCCTCCTCCTGC 59.025 50.000 0.00 0.00 0.00 4.85
920 953 2.803285 TTCCATATCCTCCTCCTGCT 57.197 50.000 0.00 0.00 0.00 4.24
921 954 2.021262 TCCATATCCTCCTCCTGCTG 57.979 55.000 0.00 0.00 0.00 4.41
922 955 0.982704 CCATATCCTCCTCCTGCTGG 59.017 60.000 2.58 2.58 0.00 4.85
923 956 1.727062 CATATCCTCCTCCTGCTGGT 58.273 55.000 9.73 0.00 34.23 4.00
939 972 1.003696 CTGGTTCCTCCTTCCTTGGTC 59.996 57.143 0.00 0.00 37.07 4.02
1126 1175 4.022589 ACGTCTTCGGGGTATGTATGTATG 60.023 45.833 0.00 0.00 41.85 2.39
1128 1177 5.181811 CGTCTTCGGGGTATGTATGTATGTA 59.818 44.000 0.00 0.00 0.00 2.29
1185 1292 4.005650 TCAGTTCCATTTTGCTGCTAGAG 58.994 43.478 0.00 0.00 0.00 2.43
1186 1293 3.128242 CAGTTCCATTTTGCTGCTAGAGG 59.872 47.826 0.00 0.00 0.00 3.69
1187 1294 3.084786 GTTCCATTTTGCTGCTAGAGGT 58.915 45.455 0.00 0.00 0.00 3.85
1188 1295 4.019321 AGTTCCATTTTGCTGCTAGAGGTA 60.019 41.667 0.00 0.00 0.00 3.08
1189 1296 4.142609 TCCATTTTGCTGCTAGAGGTAG 57.857 45.455 0.00 0.00 0.00 3.18
1190 1297 3.774766 TCCATTTTGCTGCTAGAGGTAGA 59.225 43.478 0.00 0.00 0.00 2.59
1191 1298 3.873952 CCATTTTGCTGCTAGAGGTAGAC 59.126 47.826 0.00 0.00 0.00 2.59
1192 1299 4.383552 CCATTTTGCTGCTAGAGGTAGACT 60.384 45.833 0.00 0.00 0.00 3.24
1193 1300 5.163405 CCATTTTGCTGCTAGAGGTAGACTA 60.163 44.000 0.00 0.00 0.00 2.59
1194 1301 5.584253 TTTTGCTGCTAGAGGTAGACTAG 57.416 43.478 0.00 0.00 39.92 2.57
1195 1302 3.935818 TGCTGCTAGAGGTAGACTAGT 57.064 47.619 0.00 0.00 39.36 2.57
1196 1303 4.237976 TGCTGCTAGAGGTAGACTAGTT 57.762 45.455 0.00 0.00 39.36 2.24
1197 1304 4.601084 TGCTGCTAGAGGTAGACTAGTTT 58.399 43.478 0.00 0.00 39.36 2.66
1198 1305 4.641094 TGCTGCTAGAGGTAGACTAGTTTC 59.359 45.833 0.00 0.00 39.36 2.78
1199 1306 4.885325 GCTGCTAGAGGTAGACTAGTTTCT 59.115 45.833 0.00 0.00 39.36 2.52
1200 1307 5.008316 GCTGCTAGAGGTAGACTAGTTTCTC 59.992 48.000 0.00 2.52 39.36 2.87
1201 1308 6.316280 TGCTAGAGGTAGACTAGTTTCTCT 57.684 41.667 16.64 16.64 39.36 3.10
1202 1309 6.723339 TGCTAGAGGTAGACTAGTTTCTCTT 58.277 40.000 17.24 0.24 39.36 2.85
1203 1310 6.600032 TGCTAGAGGTAGACTAGTTTCTCTTG 59.400 42.308 17.24 16.26 39.36 3.02
1204 1311 6.824704 GCTAGAGGTAGACTAGTTTCTCTTGA 59.175 42.308 19.81 8.39 39.36 3.02
1205 1312 7.201670 GCTAGAGGTAGACTAGTTTCTCTTGAC 60.202 44.444 19.81 12.73 39.36 3.18
1206 1313 6.786122 AGAGGTAGACTAGTTTCTCTTGACT 58.214 40.000 0.00 0.00 0.00 3.41
1207 1314 6.657541 AGAGGTAGACTAGTTTCTCTTGACTG 59.342 42.308 0.00 0.00 0.00 3.51
1208 1315 5.712917 AGGTAGACTAGTTTCTCTTGACTGG 59.287 44.000 0.00 0.00 0.00 4.00
1209 1316 4.529109 AGACTAGTTTCTCTTGACTGGC 57.471 45.455 0.00 0.00 0.00 4.85
1210 1317 3.259625 AGACTAGTTTCTCTTGACTGGCC 59.740 47.826 0.00 0.00 0.00 5.36
1214 1321 0.250901 TTTCTCTTGACTGGCCCAGC 60.251 55.000 11.63 4.33 34.37 4.85
1215 1322 2.435586 CTCTTGACTGGCCCAGCG 60.436 66.667 11.63 0.00 34.37 5.18
1231 1338 2.544267 CCAGCGTCTTCTTCTTTTCGTT 59.456 45.455 0.00 0.00 0.00 3.85
1232 1339 3.002348 CCAGCGTCTTCTTCTTTTCGTTT 59.998 43.478 0.00 0.00 0.00 3.60
1233 1340 4.210537 CCAGCGTCTTCTTCTTTTCGTTTA 59.789 41.667 0.00 0.00 0.00 2.01
1234 1341 5.366752 CAGCGTCTTCTTCTTTTCGTTTAG 58.633 41.667 0.00 0.00 0.00 1.85
1235 1342 5.175126 CAGCGTCTTCTTCTTTTCGTTTAGA 59.825 40.000 0.00 0.00 0.00 2.10
1236 1343 5.751990 AGCGTCTTCTTCTTTTCGTTTAGAA 59.248 36.000 0.00 0.00 37.01 2.10
1237 1344 6.424207 AGCGTCTTCTTCTTTTCGTTTAGAAT 59.576 34.615 0.00 0.00 38.86 2.40
1238 1345 7.597743 AGCGTCTTCTTCTTTTCGTTTAGAATA 59.402 33.333 0.00 0.00 38.86 1.75
1315 1432 3.744238 ATGCCCTTTTTGGTGTGTTAC 57.256 42.857 0.00 0.00 0.00 2.50
1317 1434 3.100671 TGCCCTTTTTGGTGTGTTACTT 58.899 40.909 0.00 0.00 0.00 2.24
1319 1436 4.710375 TGCCCTTTTTGGTGTGTTACTTAA 59.290 37.500 0.00 0.00 0.00 1.85
1320 1437 5.364157 TGCCCTTTTTGGTGTGTTACTTAAT 59.636 36.000 0.00 0.00 0.00 1.40
1321 1438 6.550108 TGCCCTTTTTGGTGTGTTACTTAATA 59.450 34.615 0.00 0.00 0.00 0.98
1322 1439 6.864685 GCCCTTTTTGGTGTGTTACTTAATAC 59.135 38.462 0.00 0.00 0.00 1.89
1324 1441 7.079475 CCTTTTTGGTGTGTTACTTAATACGG 58.921 38.462 0.00 0.00 30.99 4.02
1325 1442 7.041235 CCTTTTTGGTGTGTTACTTAATACGGA 60.041 37.037 0.00 0.00 30.99 4.69
1326 1443 7.424227 TTTTGGTGTGTTACTTAATACGGAG 57.576 36.000 0.00 0.00 30.99 4.63
1387 1520 1.127567 CCACTCCCAGTCCCAGTGAA 61.128 60.000 0.00 0.00 40.07 3.18
1388 1521 0.322975 CACTCCCAGTCCCAGTGAAG 59.677 60.000 0.00 0.00 40.07 3.02
1389 1522 1.298014 CTCCCAGTCCCAGTGAAGC 59.702 63.158 0.00 0.00 0.00 3.86
1391 1524 1.302832 CCCAGTCCCAGTGAAGCAC 60.303 63.158 0.00 0.00 34.10 4.40
1392 1525 1.757306 CCAGTCCCAGTGAAGCACT 59.243 57.895 0.00 0.00 46.51 4.40
1393 1526 0.321122 CCAGTCCCAGTGAAGCACTC 60.321 60.000 0.00 0.00 43.43 3.51
1394 1527 0.683973 CAGTCCCAGTGAAGCACTCT 59.316 55.000 0.00 0.00 43.43 3.24
1412 1611 9.521503 AAGCACTCTGAAATTTACTTTTCTTTC 57.478 29.630 0.00 0.00 36.71 2.62
1958 2157 2.669781 CATGGCATGGTCAAGGGTAAT 58.330 47.619 19.80 0.00 0.00 1.89
2036 2279 1.568025 CATCCGACAGATGCATGCG 59.432 57.895 14.09 2.19 45.76 4.73
2473 2813 6.631962 AGTACATTCTACTTGCTTCAGTACC 58.368 40.000 0.00 0.00 32.07 3.34
2474 2814 5.483685 ACATTCTACTTGCTTCAGTACCA 57.516 39.130 0.00 0.00 0.00 3.25
2475 2815 5.238583 ACATTCTACTTGCTTCAGTACCAC 58.761 41.667 0.00 0.00 0.00 4.16
2588 2928 2.550830 ATGGCCGATACAACATCTCC 57.449 50.000 0.00 0.00 0.00 3.71
2869 3576 2.629051 GGGAACTCGGTCATAAACCTG 58.371 52.381 0.00 0.00 46.87 4.00
2890 3597 3.890756 TGGAGAAGCAGAAATTGAGCAAA 59.109 39.130 0.00 0.00 0.00 3.68
2891 3598 4.525487 TGGAGAAGCAGAAATTGAGCAAAT 59.475 37.500 0.00 0.00 0.00 2.32
2892 3599 5.011329 TGGAGAAGCAGAAATTGAGCAAATT 59.989 36.000 0.00 0.00 40.32 1.82
3006 3714 6.429692 TCGATAATCTGTTGGTTCACATGTTT 59.570 34.615 0.00 0.00 0.00 2.83
3202 3919 0.745128 TGCAACCGTTGGTTCGTCTT 60.745 50.000 13.12 0.00 43.05 3.01
3254 3971 2.227388 GGCATCAAGACTGACCAGTTTG 59.773 50.000 3.98 10.23 42.66 2.93
3307 4024 2.928801 TGCAGTTCCTAACAGCTGAA 57.071 45.000 23.35 7.06 43.43 3.02
3308 4025 2.771089 TGCAGTTCCTAACAGCTGAAG 58.229 47.619 23.35 16.57 43.43 3.02
3377 4096 2.567615 CCCTTCCACAACACTAGCTAGT 59.432 50.000 20.95 20.95 36.90 2.57
3378 4097 3.767673 CCCTTCCACAACACTAGCTAGTA 59.232 47.826 25.63 6.12 34.13 1.82
3379 4098 4.142138 CCCTTCCACAACACTAGCTAGTAG 60.142 50.000 25.63 20.42 34.13 2.57
3380 4099 4.463186 CCTTCCACAACACTAGCTAGTAGT 59.537 45.833 25.63 21.01 43.31 2.73
3381 4100 5.651139 CCTTCCACAACACTAGCTAGTAGTA 59.349 44.000 25.63 8.48 40.27 1.82
3382 4101 6.183360 CCTTCCACAACACTAGCTAGTAGTAG 60.183 46.154 25.63 15.67 40.27 2.57
3383 4102 5.813383 TCCACAACACTAGCTAGTAGTAGT 58.187 41.667 25.63 16.32 40.27 2.73
3384 4103 6.950842 TCCACAACACTAGCTAGTAGTAGTA 58.049 40.000 25.63 10.40 40.27 1.82
3385 4104 7.046652 TCCACAACACTAGCTAGTAGTAGTAG 58.953 42.308 25.63 13.92 40.27 2.57
3492 4263 1.536284 GCTTTCGACTCGGGGTATCTG 60.536 57.143 0.00 0.00 0.00 2.90
3550 4321 1.257743 TCTGTTCGCTCCTGTAAGCT 58.742 50.000 0.00 0.00 40.23 3.74
3606 4402 5.313712 ACCTACAAGTTATTGAGGTTGTGG 58.686 41.667 0.00 0.00 40.79 4.17
3607 4403 4.156008 CCTACAAGTTATTGAGGTTGTGGC 59.844 45.833 0.00 0.00 38.83 5.01
3608 4404 3.561143 ACAAGTTATTGAGGTTGTGGCA 58.439 40.909 0.00 0.00 38.83 4.92
3609 4405 4.151883 ACAAGTTATTGAGGTTGTGGCAT 58.848 39.130 0.00 0.00 38.83 4.40
3610 4406 4.588528 ACAAGTTATTGAGGTTGTGGCATT 59.411 37.500 0.00 0.00 38.83 3.56
3632 4428 4.349365 TCCATTTTTAATGTCAGGGACCC 58.651 43.478 0.59 0.59 0.00 4.46
3644 4440 2.183555 GGACCCGGAGTAACAGCG 59.816 66.667 0.73 0.00 0.00 5.18
3801 4597 4.717313 GTGGGTTCCCGGCCAGAC 62.717 72.222 2.24 0.00 0.00 3.51
3905 4701 3.682696 ACCCTATTTCCGGAAACACTTC 58.317 45.455 31.17 0.00 32.51 3.01
3911 4710 0.316204 TCCGGAAACACTTCGACCTC 59.684 55.000 0.00 0.00 31.77 3.85
3928 4727 0.030101 CTCCTCCTCGCATTCGTCTC 59.970 60.000 0.00 0.00 36.96 3.36
3929 4728 0.394488 TCCTCCTCGCATTCGTCTCT 60.394 55.000 0.00 0.00 36.96 3.10
3934 4733 1.923204 CCTCGCATTCGTCTCTTGAAG 59.077 52.381 0.00 0.00 36.96 3.02
3982 4781 6.779860 ACTAGTTGAGGAAAATAAGCCTTCA 58.220 36.000 0.00 0.00 33.84 3.02
3989 4788 6.071391 TGAGGAAAATAAGCCTTCATGGTTTC 60.071 38.462 0.00 0.00 39.94 2.78
3992 4791 6.295292 GGAAAATAAGCCTTCATGGTTTCAGT 60.295 38.462 0.00 0.00 39.94 3.41
4060 4876 3.369052 GCCCGGATCACCATAATAATCGA 60.369 47.826 0.73 0.00 35.59 3.59
4061 4877 4.181578 CCCGGATCACCATAATAATCGAC 58.818 47.826 0.73 0.00 35.59 4.20
4063 4879 5.126545 CCCGGATCACCATAATAATCGACTA 59.873 44.000 0.73 0.00 35.59 2.59
4065 4881 7.265673 CCGGATCACCATAATAATCGACTAAT 58.734 38.462 0.00 0.00 35.59 1.73
4066 4882 7.435488 CCGGATCACCATAATAATCGACTAATC 59.565 40.741 0.00 0.00 35.59 1.75
4067 4883 7.165977 CGGATCACCATAATAATCGACTAATCG 59.834 40.741 0.00 0.00 42.28 3.34
4068 4884 7.974501 GGATCACCATAATAATCGACTAATCGT 59.025 37.037 0.00 0.00 41.63 3.73
4123 4939 1.173444 AACAGAGTCGTCGTCCAGCT 61.173 55.000 0.00 0.00 0.00 4.24
4129 6741 3.432588 CGTCGTCCAGCTCTCGGT 61.433 66.667 0.00 0.00 0.00 4.69
4170 6782 2.978010 CCATATCCCGCCCGCAAC 60.978 66.667 0.00 0.00 0.00 4.17
4171 6783 2.978010 CATATCCCGCCCGCAACC 60.978 66.667 0.00 0.00 0.00 3.77
4172 6784 4.619227 ATATCCCGCCCGCAACCG 62.619 66.667 0.00 0.00 0.00 4.44
4192 6804 3.384467 CCGCAAACCCTCCATATTTGAAT 59.616 43.478 0.30 0.00 35.73 2.57
4238 6850 1.349357 AGAGCTGGAGGGAAGTTTCAC 59.651 52.381 0.00 0.00 0.00 3.18
4254 6866 2.122954 ACCTCGGCCTTTCCTCCT 59.877 61.111 0.00 0.00 0.00 3.69
4302 6914 1.539827 GTTCGTATGGCTGCCACTTTT 59.460 47.619 25.99 10.94 35.80 2.27
4305 6917 0.456653 GTATGGCTGCCACTTTTGCG 60.457 55.000 25.99 0.00 35.80 4.85
4324 6936 2.270923 CGCTTGTCAATGCAGTAGCTA 58.729 47.619 5.25 0.00 42.74 3.32
4340 6952 6.042552 GCAGTAGCTACATATCCCATATCCAT 59.957 42.308 25.28 0.00 37.91 3.41
4367 6979 1.742831 GAGCGTCAATTAATGGCCACA 59.257 47.619 8.16 0.00 0.00 4.17
4368 6980 2.163412 GAGCGTCAATTAATGGCCACAA 59.837 45.455 8.16 5.67 0.00 3.33
4372 6984 2.094752 GTCAATTAATGGCCACAACGCT 60.095 45.455 8.16 0.00 0.00 5.07
4373 6985 2.560542 TCAATTAATGGCCACAACGCTT 59.439 40.909 8.16 0.00 0.00 4.68
4374 6986 2.923020 CAATTAATGGCCACAACGCTTC 59.077 45.455 8.16 0.00 0.00 3.86
4377 6989 0.537143 AATGGCCACAACGCTTCTCA 60.537 50.000 8.16 0.00 0.00 3.27
4381 6993 0.601311 GCCACAACGCTTCTCACTCT 60.601 55.000 0.00 0.00 0.00 3.24
4382 6994 1.423395 CCACAACGCTTCTCACTCTC 58.577 55.000 0.00 0.00 0.00 3.20
4408 7041 1.522355 ACTCGAGCATGCCCATTCG 60.522 57.895 15.66 17.10 34.56 3.34
4414 7047 0.473755 AGCATGCCCATTCGTGGATA 59.526 50.000 15.66 0.00 0.00 2.59
4418 7051 1.317613 TGCCCATTCGTGGATATTGC 58.682 50.000 0.00 0.00 0.00 3.56
4420 7053 1.537202 GCCCATTCGTGGATATTGCTC 59.463 52.381 0.00 0.00 0.00 4.26
4424 7057 2.238942 TTCGTGGATATTGCTCGCAT 57.761 45.000 0.00 0.00 0.00 4.73
4425 7058 3.378911 TTCGTGGATATTGCTCGCATA 57.621 42.857 0.00 0.00 0.00 3.14
4426 7059 2.672714 TCGTGGATATTGCTCGCATAC 58.327 47.619 0.00 0.00 0.00 2.39
4428 7061 2.799978 CGTGGATATTGCTCGCATACAA 59.200 45.455 0.00 0.00 0.00 2.41
4430 7063 4.527564 GTGGATATTGCTCGCATACAAAC 58.472 43.478 0.00 0.00 0.00 2.93
4431 7064 4.035091 GTGGATATTGCTCGCATACAAACA 59.965 41.667 0.00 0.00 0.00 2.83
4432 7065 4.035091 TGGATATTGCTCGCATACAAACAC 59.965 41.667 0.00 0.00 0.00 3.32
4433 7066 2.525750 ATTGCTCGCATACAAACACG 57.474 45.000 0.00 0.00 0.00 4.49
4434 7067 1.222300 TTGCTCGCATACAAACACGT 58.778 45.000 0.00 0.00 0.00 4.49
4436 7069 0.787787 GCTCGCATACAAACACGTCA 59.212 50.000 0.00 0.00 0.00 4.35
4437 7070 1.393539 GCTCGCATACAAACACGTCAT 59.606 47.619 0.00 0.00 0.00 3.06
4438 7071 2.534939 GCTCGCATACAAACACGTCATC 60.535 50.000 0.00 0.00 0.00 2.92
4451 7084 1.805945 GTCATCGTGCACCCTCGAC 60.806 63.158 12.15 9.24 39.43 4.20
4466 7099 2.852180 CGACGCCGGGGATGATACA 61.852 63.158 27.23 0.00 0.00 2.29
4469 7102 2.802724 CGCCGGGGATGATACACCA 61.803 63.158 14.46 0.00 31.94 4.17
4470 7103 1.761174 GCCGGGGATGATACACCAT 59.239 57.895 2.18 0.00 31.94 3.55
4475 7108 2.093973 CGGGGATGATACACCATAGCTC 60.094 54.545 0.00 0.00 31.94 4.09
4499 7133 1.154263 CACGTCGAAGGAGACCGTC 60.154 63.158 0.00 0.00 37.85 4.79
4507 7141 2.572284 GGAGACCGTCCGGAAGTG 59.428 66.667 16.46 10.06 34.84 3.16
4508 7142 2.273912 GGAGACCGTCCGGAAGTGT 61.274 63.158 16.46 13.11 34.84 3.55
4510 7144 1.521450 GAGACCGTCCGGAAGTGTGA 61.521 60.000 16.46 0.00 38.96 3.58
4516 7150 1.209128 GTCCGGAAGTGTGATATGCG 58.791 55.000 5.23 0.00 0.00 4.73
4527 7161 1.196354 GTGATATGCGAGCAATCTGGC 59.804 52.381 0.57 0.00 43.31 4.85
4530 7164 0.465287 TATGCGAGCAATCTGGCTGA 59.535 50.000 0.57 0.00 45.99 4.26
4534 7168 1.449246 GAGCAATCTGGCTGACGCT 60.449 57.895 16.67 16.67 45.99 5.07
4539 7173 2.095263 GCAATCTGGCTGACGCTTTTTA 60.095 45.455 9.49 0.00 36.09 1.52
4542 7176 5.266242 CAATCTGGCTGACGCTTTTTATAC 58.734 41.667 0.00 0.00 36.09 1.47
4547 7181 3.625764 GGCTGACGCTTTTTATACATCCA 59.374 43.478 0.00 0.00 36.09 3.41
4551 7185 6.033513 GCTGACGCTTTTTATACATCCAAAAC 59.966 38.462 0.00 0.00 0.00 2.43
4572 7207 3.692406 ACACGCCCGAGAAGACCC 61.692 66.667 0.00 0.00 0.00 4.46
4574 7209 3.382832 ACGCCCGAGAAGACCCTG 61.383 66.667 0.00 0.00 0.00 4.45
4606 7241 1.367840 CGGCTATGGTCTGCCCTAC 59.632 63.158 0.00 0.00 45.90 3.18
4672 7307 6.074249 ACAAACGAAGAACGAGAAGAAGAATC 60.074 38.462 0.00 0.00 45.77 2.52
4682 7317 5.480772 ACGAGAAGAAGAATCAGGGTTAAGA 59.519 40.000 0.00 0.00 0.00 2.10
4686 7321 7.619965 AGAAGAAGAATCAGGGTTAAGAAGAG 58.380 38.462 0.00 0.00 0.00 2.85
4691 7326 7.747809 AGAATCAGGGTTAAGAAGAGAAGAT 57.252 36.000 0.00 0.00 0.00 2.40
4692 7327 8.846423 AGAATCAGGGTTAAGAAGAGAAGATA 57.154 34.615 0.00 0.00 0.00 1.98
4693 7328 8.923270 AGAATCAGGGTTAAGAAGAGAAGATAG 58.077 37.037 0.00 0.00 0.00 2.08
4694 7329 8.846423 AATCAGGGTTAAGAAGAGAAGATAGA 57.154 34.615 0.00 0.00 0.00 1.98
4695 7330 8.846423 ATCAGGGTTAAGAAGAGAAGATAGAA 57.154 34.615 0.00 0.00 0.00 2.10
4696 7331 8.666129 TCAGGGTTAAGAAGAGAAGATAGAAA 57.334 34.615 0.00 0.00 0.00 2.52
4697 7332 8.754080 TCAGGGTTAAGAAGAGAAGATAGAAAG 58.246 37.037 0.00 0.00 0.00 2.62
4698 7333 8.536175 CAGGGTTAAGAAGAGAAGATAGAAAGT 58.464 37.037 0.00 0.00 0.00 2.66
4699 7334 9.771140 AGGGTTAAGAAGAGAAGATAGAAAGTA 57.229 33.333 0.00 0.00 0.00 2.24
4712 7347 9.959775 GAAGATAGAAAGTAGATGTTTTTGTCG 57.040 33.333 0.00 0.00 0.00 4.35
4713 7348 9.706691 AAGATAGAAAGTAGATGTTTTTGTCGA 57.293 29.630 0.00 0.00 0.00 4.20
4714 7349 9.877178 AGATAGAAAGTAGATGTTTTTGTCGAT 57.123 29.630 0.00 0.00 0.00 3.59
4717 7352 8.154649 AGAAAGTAGATGTTTTTGTCGATTGT 57.845 30.769 0.00 0.00 0.00 2.71
4718 7353 9.268268 AGAAAGTAGATGTTTTTGTCGATTGTA 57.732 29.630 0.00 0.00 0.00 2.41
4720 7355 9.825972 AAAGTAGATGTTTTTGTCGATTGTATG 57.174 29.630 0.00 0.00 0.00 2.39
4721 7356 8.547967 AGTAGATGTTTTTGTCGATTGTATGT 57.452 30.769 0.00 0.00 0.00 2.29
4722 7357 8.999431 AGTAGATGTTTTTGTCGATTGTATGTT 58.001 29.630 0.00 0.00 0.00 2.71
4723 7358 9.051027 GTAGATGTTTTTGTCGATTGTATGTTG 57.949 33.333 0.00 0.00 0.00 3.33
4724 7359 7.648142 AGATGTTTTTGTCGATTGTATGTTGT 58.352 30.769 0.00 0.00 0.00 3.32
4725 7360 8.134895 AGATGTTTTTGTCGATTGTATGTTGTT 58.865 29.630 0.00 0.00 0.00 2.83
4726 7361 7.672351 TGTTTTTGTCGATTGTATGTTGTTC 57.328 32.000 0.00 0.00 0.00 3.18
4727 7362 7.251281 TGTTTTTGTCGATTGTATGTTGTTCA 58.749 30.769 0.00 0.00 0.00 3.18
4728 7363 7.755373 TGTTTTTGTCGATTGTATGTTGTTCAA 59.245 29.630 0.00 0.00 0.00 2.69
4729 7364 8.751335 GTTTTTGTCGATTGTATGTTGTTCAAT 58.249 29.630 0.00 0.00 35.00 2.57
4730 7365 8.500837 TTTTGTCGATTGTATGTTGTTCAATC 57.499 30.769 0.00 0.00 41.96 2.67
4735 7370 4.655440 TTGTATGTTGTTCAATCGGTCG 57.345 40.909 0.00 0.00 0.00 4.79
4736 7371 3.655486 TGTATGTTGTTCAATCGGTCGT 58.345 40.909 0.00 0.00 0.00 4.34
4737 7372 3.676172 TGTATGTTGTTCAATCGGTCGTC 59.324 43.478 0.00 0.00 0.00 4.20
4738 7373 2.226602 TGTTGTTCAATCGGTCGTCA 57.773 45.000 0.00 0.00 0.00 4.35
4739 7374 1.862201 TGTTGTTCAATCGGTCGTCAC 59.138 47.619 0.00 0.00 0.00 3.67
4740 7375 1.193874 GTTGTTCAATCGGTCGTCACC 59.806 52.381 0.00 0.00 39.69 4.02
4741 7376 0.677288 TGTTCAATCGGTCGTCACCT 59.323 50.000 0.00 0.00 41.17 4.00
4742 7377 1.069513 TGTTCAATCGGTCGTCACCTT 59.930 47.619 0.00 0.00 41.17 3.50
4743 7378 2.140717 GTTCAATCGGTCGTCACCTTT 58.859 47.619 0.00 0.00 41.17 3.11
4744 7379 2.074547 TCAATCGGTCGTCACCTTTC 57.925 50.000 0.00 0.00 41.17 2.62
4745 7380 1.341852 TCAATCGGTCGTCACCTTTCA 59.658 47.619 0.00 0.00 41.17 2.69
4746 7381 2.028476 TCAATCGGTCGTCACCTTTCAT 60.028 45.455 0.00 0.00 41.17 2.57
4747 7382 2.742053 CAATCGGTCGTCACCTTTCATT 59.258 45.455 0.00 0.00 41.17 2.57
4748 7383 2.536761 TCGGTCGTCACCTTTCATTT 57.463 45.000 0.00 0.00 41.17 2.32
4749 7384 2.139917 TCGGTCGTCACCTTTCATTTG 58.860 47.619 0.00 0.00 41.17 2.32
4750 7385 1.871039 CGGTCGTCACCTTTCATTTGT 59.129 47.619 0.00 0.00 41.17 2.83
4751 7386 2.289547 CGGTCGTCACCTTTCATTTGTT 59.710 45.455 0.00 0.00 41.17 2.83
4752 7387 3.242936 CGGTCGTCACCTTTCATTTGTTT 60.243 43.478 0.00 0.00 41.17 2.83
4753 7388 4.024725 CGGTCGTCACCTTTCATTTGTTTA 60.025 41.667 0.00 0.00 41.17 2.01
4754 7389 5.334569 CGGTCGTCACCTTTCATTTGTTTAT 60.335 40.000 0.00 0.00 41.17 1.40
4755 7390 5.856455 GGTCGTCACCTTTCATTTGTTTATG 59.144 40.000 0.00 0.00 40.00 1.90
4756 7391 6.435428 GTCGTCACCTTTCATTTGTTTATGT 58.565 36.000 0.00 0.00 0.00 2.29
4757 7392 6.359617 GTCGTCACCTTTCATTTGTTTATGTG 59.640 38.462 0.00 0.00 0.00 3.21
4758 7393 5.629020 CGTCACCTTTCATTTGTTTATGTGG 59.371 40.000 0.00 0.00 0.00 4.17
4759 7394 5.405269 GTCACCTTTCATTTGTTTATGTGGC 59.595 40.000 0.00 0.00 0.00 5.01
4760 7395 4.385447 CACCTTTCATTTGTTTATGTGGCG 59.615 41.667 0.00 0.00 0.00 5.69
4761 7396 3.925913 CCTTTCATTTGTTTATGTGGCGG 59.074 43.478 0.00 0.00 0.00 6.13
4762 7397 2.645730 TCATTTGTTTATGTGGCGGC 57.354 45.000 0.00 0.00 0.00 6.53
4763 7398 2.166829 TCATTTGTTTATGTGGCGGCT 58.833 42.857 11.43 0.00 0.00 5.52
4764 7399 3.348119 TCATTTGTTTATGTGGCGGCTA 58.652 40.909 11.43 0.00 0.00 3.93
4765 7400 3.376859 TCATTTGTTTATGTGGCGGCTAG 59.623 43.478 11.43 0.00 0.00 3.42
4766 7401 2.772077 TTGTTTATGTGGCGGCTAGA 57.228 45.000 11.43 0.00 0.00 2.43
4767 7402 2.018542 TGTTTATGTGGCGGCTAGAC 57.981 50.000 11.43 0.00 0.00 2.59
4768 7403 1.553248 TGTTTATGTGGCGGCTAGACT 59.447 47.619 11.43 0.00 0.00 3.24
4769 7404 2.027561 TGTTTATGTGGCGGCTAGACTT 60.028 45.455 11.43 0.90 0.00 3.01
4770 7405 2.596904 TTATGTGGCGGCTAGACTTC 57.403 50.000 11.43 0.00 0.00 3.01
4771 7406 0.750850 TATGTGGCGGCTAGACTTCC 59.249 55.000 11.43 0.00 0.00 3.46
4772 7407 0.978146 ATGTGGCGGCTAGACTTCCT 60.978 55.000 11.43 0.00 0.00 3.36
4773 7408 0.323999 TGTGGCGGCTAGACTTCCTA 60.324 55.000 11.43 0.00 0.00 2.94
4774 7409 1.041437 GTGGCGGCTAGACTTCCTAT 58.959 55.000 11.43 0.00 0.00 2.57
4775 7410 2.236766 GTGGCGGCTAGACTTCCTATA 58.763 52.381 11.43 0.00 0.00 1.31
4776 7411 2.030096 GTGGCGGCTAGACTTCCTATAC 60.030 54.545 11.43 0.00 0.00 1.47
4777 7412 2.236766 GGCGGCTAGACTTCCTATACA 58.763 52.381 0.00 0.00 0.00 2.29
4778 7413 2.626743 GGCGGCTAGACTTCCTATACAA 59.373 50.000 0.00 0.00 0.00 2.41
4779 7414 3.305471 GGCGGCTAGACTTCCTATACAAG 60.305 52.174 0.00 0.00 0.00 3.16
4780 7415 3.568853 GCGGCTAGACTTCCTATACAAGA 59.431 47.826 0.00 0.00 0.00 3.02
4781 7416 4.037684 GCGGCTAGACTTCCTATACAAGAA 59.962 45.833 0.00 0.00 0.00 2.52
4782 7417 5.451520 GCGGCTAGACTTCCTATACAAGAAA 60.452 44.000 0.00 0.00 0.00 2.52
4783 7418 6.570692 CGGCTAGACTTCCTATACAAGAAAA 58.429 40.000 0.00 0.00 0.00 2.29
4784 7419 6.697892 CGGCTAGACTTCCTATACAAGAAAAG 59.302 42.308 0.00 0.00 0.00 2.27
4785 7420 6.987404 GGCTAGACTTCCTATACAAGAAAAGG 59.013 42.308 0.00 0.00 0.00 3.11
4786 7421 7.147707 GGCTAGACTTCCTATACAAGAAAAGGA 60.148 40.741 0.00 0.00 36.34 3.36
4787 7422 7.707464 GCTAGACTTCCTATACAAGAAAAGGAC 59.293 40.741 0.00 0.00 37.86 3.85
4788 7423 7.800300 AGACTTCCTATACAAGAAAAGGACT 57.200 36.000 0.00 0.00 37.86 3.85
4789 7424 8.208575 AGACTTCCTATACAAGAAAAGGACTT 57.791 34.615 0.00 0.00 37.86 3.01
4790 7425 8.315482 AGACTTCCTATACAAGAAAAGGACTTC 58.685 37.037 0.00 0.00 37.86 3.01
4791 7426 7.974504 ACTTCCTATACAAGAAAAGGACTTCA 58.025 34.615 0.00 0.00 37.86 3.02
4792 7427 8.437575 ACTTCCTATACAAGAAAAGGACTTCAA 58.562 33.333 0.00 0.00 37.86 2.69
4793 7428 9.284968 CTTCCTATACAAGAAAAGGACTTCAAA 57.715 33.333 0.00 0.00 37.86 2.69
4794 7429 9.807921 TTCCTATACAAGAAAAGGACTTCAAAT 57.192 29.630 0.00 0.00 37.86 2.32
4795 7430 9.807921 TCCTATACAAGAAAAGGACTTCAAATT 57.192 29.630 0.00 0.00 33.18 1.82
4800 7435 8.877808 ACAAGAAAAGGACTTCAAATTTCATC 57.122 30.769 0.00 0.00 33.53 2.92
4801 7436 7.928167 ACAAGAAAAGGACTTCAAATTTCATCC 59.072 33.333 0.00 0.00 33.53 3.51
4802 7437 7.601705 AGAAAAGGACTTCAAATTTCATCCA 57.398 32.000 8.50 0.00 33.53 3.41
4803 7438 8.021898 AGAAAAGGACTTCAAATTTCATCCAA 57.978 30.769 8.50 0.00 33.53 3.53
4804 7439 8.485392 AGAAAAGGACTTCAAATTTCATCCAAA 58.515 29.630 8.50 0.00 33.53 3.28
4805 7440 9.276590 GAAAAGGACTTCAAATTTCATCCAAAT 57.723 29.630 8.50 0.00 36.12 2.32
4806 7441 8.837788 AAAGGACTTCAAATTTCATCCAAATC 57.162 30.769 8.50 0.00 33.16 2.17
4807 7442 6.939622 AGGACTTCAAATTTCATCCAAATCC 58.060 36.000 8.50 0.00 33.16 3.01
4808 7443 6.727697 AGGACTTCAAATTTCATCCAAATCCT 59.272 34.615 8.50 0.00 33.16 3.24
4809 7444 7.236225 AGGACTTCAAATTTCATCCAAATCCTT 59.764 33.333 8.50 0.00 33.16 3.36
4810 7445 7.547019 GGACTTCAAATTTCATCCAAATCCTTC 59.453 37.037 0.00 0.00 33.16 3.46
4811 7446 7.389232 ACTTCAAATTTCATCCAAATCCTTCC 58.611 34.615 0.00 0.00 33.16 3.46
4812 7447 6.931790 TCAAATTTCATCCAAATCCTTCCA 57.068 33.333 0.00 0.00 33.16 3.53
4813 7448 7.313740 TCAAATTTCATCCAAATCCTTCCAA 57.686 32.000 0.00 0.00 33.16 3.53
4814 7449 7.743749 TCAAATTTCATCCAAATCCTTCCAAA 58.256 30.769 0.00 0.00 33.16 3.28
4815 7450 8.216423 TCAAATTTCATCCAAATCCTTCCAAAA 58.784 29.630 0.00 0.00 33.16 2.44
4816 7451 9.016438 CAAATTTCATCCAAATCCTTCCAAAAT 57.984 29.630 0.00 0.00 33.16 1.82
4817 7452 8.797350 AATTTCATCCAAATCCTTCCAAAATC 57.203 30.769 0.00 0.00 33.16 2.17
4818 7453 6.931790 TTCATCCAAATCCTTCCAAAATCA 57.068 33.333 0.00 0.00 0.00 2.57
4819 7454 6.931790 TCATCCAAATCCTTCCAAAATCAA 57.068 33.333 0.00 0.00 0.00 2.57
4820 7455 6.700352 TCATCCAAATCCTTCCAAAATCAAC 58.300 36.000 0.00 0.00 0.00 3.18
4821 7456 6.497954 TCATCCAAATCCTTCCAAAATCAACT 59.502 34.615 0.00 0.00 0.00 3.16
4822 7457 6.100404 TCCAAATCCTTCCAAAATCAACTG 57.900 37.500 0.00 0.00 0.00 3.16
4823 7458 5.837979 TCCAAATCCTTCCAAAATCAACTGA 59.162 36.000 0.00 0.00 0.00 3.41
4824 7459 6.326064 TCCAAATCCTTCCAAAATCAACTGAA 59.674 34.615 0.00 0.00 0.00 3.02
4825 7460 6.424812 CCAAATCCTTCCAAAATCAACTGAAC 59.575 38.462 0.00 0.00 0.00 3.18
4826 7461 6.983906 AATCCTTCCAAAATCAACTGAACT 57.016 33.333 0.00 0.00 0.00 3.01
4827 7462 6.581171 ATCCTTCCAAAATCAACTGAACTC 57.419 37.500 0.00 0.00 0.00 3.01
4828 7463 4.515191 TCCTTCCAAAATCAACTGAACTCG 59.485 41.667 0.00 0.00 0.00 4.18
4829 7464 4.275936 CCTTCCAAAATCAACTGAACTCGT 59.724 41.667 0.00 0.00 0.00 4.18
4830 7465 5.468746 CCTTCCAAAATCAACTGAACTCGTA 59.531 40.000 0.00 0.00 0.00 3.43
4831 7466 6.149474 CCTTCCAAAATCAACTGAACTCGTAT 59.851 38.462 0.00 0.00 0.00 3.06
4832 7467 7.308589 CCTTCCAAAATCAACTGAACTCGTATT 60.309 37.037 0.00 0.00 0.00 1.89
4833 7468 7.504924 TCCAAAATCAACTGAACTCGTATTT 57.495 32.000 0.00 0.00 0.00 1.40
4834 7469 8.610248 TCCAAAATCAACTGAACTCGTATTTA 57.390 30.769 0.00 0.00 0.00 1.40
4835 7470 8.717821 TCCAAAATCAACTGAACTCGTATTTAG 58.282 33.333 0.00 0.00 0.00 1.85
4836 7471 7.962918 CCAAAATCAACTGAACTCGTATTTAGG 59.037 37.037 0.00 0.00 0.00 2.69
4837 7472 8.504005 CAAAATCAACTGAACTCGTATTTAGGT 58.496 33.333 0.00 0.00 0.00 3.08
4838 7473 9.715121 AAAATCAACTGAACTCGTATTTAGGTA 57.285 29.630 0.00 0.00 0.00 3.08
4839 7474 9.715121 AAATCAACTGAACTCGTATTTAGGTAA 57.285 29.630 0.00 0.00 0.00 2.85
4840 7475 8.928270 ATCAACTGAACTCGTATTTAGGTAAG 57.072 34.615 0.00 0.00 0.00 2.34
4841 7476 7.889469 TCAACTGAACTCGTATTTAGGTAAGT 58.111 34.615 0.00 0.00 0.00 2.24
4842 7477 8.025445 TCAACTGAACTCGTATTTAGGTAAGTC 58.975 37.037 0.00 0.00 0.00 3.01
4843 7478 7.700022 ACTGAACTCGTATTTAGGTAAGTCT 57.300 36.000 0.00 0.00 0.00 3.24
4844 7479 8.798859 ACTGAACTCGTATTTAGGTAAGTCTA 57.201 34.615 0.00 0.00 0.00 2.59
4845 7480 9.236006 ACTGAACTCGTATTTAGGTAAGTCTAA 57.764 33.333 0.00 0.00 0.00 2.10
4846 7481 9.719279 CTGAACTCGTATTTAGGTAAGTCTAAG 57.281 37.037 0.00 0.00 31.73 2.18
4847 7482 9.453572 TGAACTCGTATTTAGGTAAGTCTAAGA 57.546 33.333 0.00 0.00 31.73 2.10
4848 7483 9.715123 GAACTCGTATTTAGGTAAGTCTAAGAC 57.285 37.037 0.00 0.00 31.73 3.01
4849 7484 8.798859 ACTCGTATTTAGGTAAGTCTAAGACA 57.201 34.615 0.00 0.00 34.60 3.41
4850 7485 9.406113 ACTCGTATTTAGGTAAGTCTAAGACAT 57.594 33.333 0.00 0.00 34.60 3.06
4851 7486 9.881529 CTCGTATTTAGGTAAGTCTAAGACATC 57.118 37.037 0.00 0.00 34.60 3.06
4852 7487 9.399797 TCGTATTTAGGTAAGTCTAAGACATCA 57.600 33.333 0.00 0.00 34.60 3.07
4857 7492 9.582431 TTTAGGTAAGTCTAAGACATCAATTCG 57.418 33.333 0.00 0.00 34.60 3.34
4858 7493 7.406031 AGGTAAGTCTAAGACATCAATTCGA 57.594 36.000 0.00 0.00 34.60 3.71
4859 7494 8.012957 AGGTAAGTCTAAGACATCAATTCGAT 57.987 34.615 0.00 0.00 34.60 3.59
4860 7495 8.478877 AGGTAAGTCTAAGACATCAATTCGATT 58.521 33.333 0.00 0.00 34.60 3.34
4861 7496 9.099454 GGTAAGTCTAAGACATCAATTCGATTT 57.901 33.333 0.00 0.00 34.60 2.17
4864 7499 9.831737 AAGTCTAAGACATCAATTCGATTTTTG 57.168 29.630 0.00 0.00 34.60 2.44
4865 7500 8.454106 AGTCTAAGACATCAATTCGATTTTTGG 58.546 33.333 0.00 0.00 34.60 3.28
4866 7501 8.450964 GTCTAAGACATCAATTCGATTTTTGGA 58.549 33.333 0.00 0.00 32.09 3.53
4867 7502 9.177608 TCTAAGACATCAATTCGATTTTTGGAT 57.822 29.630 0.00 0.00 29.21 3.41
4868 7503 9.443283 CTAAGACATCAATTCGATTTTTGGATC 57.557 33.333 0.00 0.00 29.21 3.36
4869 7504 6.799512 AGACATCAATTCGATTTTTGGATCC 58.200 36.000 4.20 4.20 29.21 3.36
4870 7505 6.604795 AGACATCAATTCGATTTTTGGATCCT 59.395 34.615 14.23 0.00 29.21 3.24
4871 7506 7.775093 AGACATCAATTCGATTTTTGGATCCTA 59.225 33.333 14.23 1.56 29.21 2.94
4872 7507 7.707104 ACATCAATTCGATTTTTGGATCCTAC 58.293 34.615 14.23 0.00 29.21 3.18
4873 7508 7.557719 ACATCAATTCGATTTTTGGATCCTACT 59.442 33.333 14.23 0.00 29.21 2.57
4874 7509 7.320443 TCAATTCGATTTTTGGATCCTACTG 57.680 36.000 14.23 0.00 0.00 2.74
4875 7510 6.318648 TCAATTCGATTTTTGGATCCTACTGG 59.681 38.462 14.23 0.00 0.00 4.00
4876 7511 3.541632 TCGATTTTTGGATCCTACTGGC 58.458 45.455 14.23 0.00 0.00 4.85
4877 7512 2.618709 CGATTTTTGGATCCTACTGGCC 59.381 50.000 14.23 0.00 0.00 5.36
4878 7513 3.631250 GATTTTTGGATCCTACTGGCCA 58.369 45.455 14.23 4.71 0.00 5.36
4879 7514 2.507407 TTTTGGATCCTACTGGCCAC 57.493 50.000 14.23 0.00 0.00 5.01
4880 7515 1.367346 TTTGGATCCTACTGGCCACA 58.633 50.000 14.23 0.00 0.00 4.17
4881 7516 1.367346 TTGGATCCTACTGGCCACAA 58.633 50.000 14.23 0.00 0.00 3.33
4882 7517 1.367346 TGGATCCTACTGGCCACAAA 58.633 50.000 14.23 0.00 0.00 2.83
4883 7518 1.004277 TGGATCCTACTGGCCACAAAC 59.996 52.381 14.23 0.00 0.00 2.93
4884 7519 1.369625 GATCCTACTGGCCACAAACG 58.630 55.000 0.00 0.00 0.00 3.60
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 1.202818 GGGGATACATCCTCCAACAGC 60.203 57.143 8.14 0.00 46.35 4.40
47 48 7.123247 CACATTTCTTTTCTCTTGGGGATACAT 59.877 37.037 0.00 0.00 39.74 2.29
49 50 6.659242 TCACATTTCTTTTCTCTTGGGGATAC 59.341 38.462 0.00 0.00 0.00 2.24
51 52 5.644188 TCACATTTCTTTTCTCTTGGGGAT 58.356 37.500 0.00 0.00 0.00 3.85
77 78 4.503991 GCTGGATCCCTGGAAATACAGTAG 60.504 50.000 9.90 0.00 36.75 2.57
78 79 3.391296 GCTGGATCCCTGGAAATACAGTA 59.609 47.826 9.90 0.00 36.75 2.74
79 80 2.173569 GCTGGATCCCTGGAAATACAGT 59.826 50.000 9.90 0.00 36.75 3.55
80 81 2.441001 AGCTGGATCCCTGGAAATACAG 59.559 50.000 9.90 13.87 38.21 2.74
81 82 2.492025 AGCTGGATCCCTGGAAATACA 58.508 47.619 9.90 0.00 0.00 2.29
209 210 4.171878 TGGAGGATGGACTAGTCACTAG 57.828 50.000 23.91 10.55 39.72 2.57
210 211 4.279145 GTTGGAGGATGGACTAGTCACTA 58.721 47.826 23.91 10.30 0.00 2.74
211 212 3.100671 GTTGGAGGATGGACTAGTCACT 58.899 50.000 23.91 15.17 0.00 3.41
212 213 2.159226 CGTTGGAGGATGGACTAGTCAC 60.159 54.545 23.91 13.68 0.00 3.67
213 214 2.100197 CGTTGGAGGATGGACTAGTCA 58.900 52.381 23.91 10.85 0.00 3.41
214 215 2.376109 TCGTTGGAGGATGGACTAGTC 58.624 52.381 14.87 14.87 0.00 2.59
215 216 2.526888 TCGTTGGAGGATGGACTAGT 57.473 50.000 0.00 0.00 0.00 2.57
216 217 3.430929 CCTTTCGTTGGAGGATGGACTAG 60.431 52.174 0.00 0.00 34.91 2.57
232 233 1.398595 CGTTGCTTGCTTTCCTTTCG 58.601 50.000 0.00 0.00 0.00 3.46
242 243 3.029735 CCAAACGCCGTTGCTTGC 61.030 61.111 1.95 0.00 34.43 4.01
297 299 2.158726 ACGGTTTGGCTTGGTTTCTCTA 60.159 45.455 0.00 0.00 0.00 2.43
299 301 1.029681 ACGGTTTGGCTTGGTTTCTC 58.970 50.000 0.00 0.00 0.00 2.87
301 303 3.128068 CCTATACGGTTTGGCTTGGTTTC 59.872 47.826 0.00 0.00 0.00 2.78
302 304 3.086282 CCTATACGGTTTGGCTTGGTTT 58.914 45.455 0.00 0.00 0.00 3.27
305 307 2.093128 ACTCCTATACGGTTTGGCTTGG 60.093 50.000 0.00 0.00 0.00 3.61
366 370 1.643292 CGCATAGGAATGTGTGGCG 59.357 57.895 0.00 0.00 38.55 5.69
367 371 1.356624 GCGCATAGGAATGTGTGGC 59.643 57.895 0.30 0.00 44.04 5.01
368 372 0.378257 GTGCGCATAGGAATGTGTGG 59.622 55.000 15.91 0.00 44.04 4.17
369 373 0.026674 CGTGCGCATAGGAATGTGTG 59.973 55.000 15.91 0.00 44.04 3.82
416 420 3.751518 TCTAGTGAGCACGGCATCTATA 58.248 45.455 0.00 0.00 36.20 1.31
417 421 2.556189 CTCTAGTGAGCACGGCATCTAT 59.444 50.000 0.00 0.00 36.20 1.98
440 444 0.109458 TATGATGCCGTATCGTCGCC 60.109 55.000 0.00 0.00 38.71 5.54
448 452 3.127895 GGCAAAGTGTTTATGATGCCGTA 59.872 43.478 0.00 0.00 43.26 4.02
531 536 4.202388 GGAGTAGGAGTAGGAGGAGTAGTG 60.202 54.167 0.00 0.00 0.00 2.74
532 537 3.975982 GGAGTAGGAGTAGGAGGAGTAGT 59.024 52.174 0.00 0.00 0.00 2.73
535 543 3.154546 AGGAGTAGGAGTAGGAGGAGT 57.845 52.381 0.00 0.00 0.00 3.85
586 596 2.272698 ACGATGGATGGATGGATGGAT 58.727 47.619 0.00 0.00 0.00 3.41
587 597 1.733385 ACGATGGATGGATGGATGGA 58.267 50.000 0.00 0.00 0.00 3.41
588 598 2.156917 CAACGATGGATGGATGGATGG 58.843 52.381 0.00 0.00 0.00 3.51
589 599 3.130280 TCAACGATGGATGGATGGATG 57.870 47.619 0.00 0.00 0.00 3.51
590 600 3.618263 CGATCAACGATGGATGGATGGAT 60.618 47.826 0.00 0.00 45.77 3.41
591 601 2.289010 CGATCAACGATGGATGGATGGA 60.289 50.000 0.00 0.00 45.77 3.41
592 602 2.071540 CGATCAACGATGGATGGATGG 58.928 52.381 0.00 0.00 45.77 3.51
593 603 2.759191 ACGATCAACGATGGATGGATG 58.241 47.619 0.00 0.00 45.77 3.51
721 738 0.826715 CCATCCATCACTCGGACAGT 59.173 55.000 0.00 0.00 34.69 3.55
847 880 4.941263 GCAACAAATAGTCACACCATAGGA 59.059 41.667 0.00 0.00 0.00 2.94
848 881 4.201812 CGCAACAAATAGTCACACCATAGG 60.202 45.833 0.00 0.00 0.00 2.57
849 882 4.629634 TCGCAACAAATAGTCACACCATAG 59.370 41.667 0.00 0.00 0.00 2.23
850 883 4.570930 TCGCAACAAATAGTCACACCATA 58.429 39.130 0.00 0.00 0.00 2.74
851 884 3.407698 TCGCAACAAATAGTCACACCAT 58.592 40.909 0.00 0.00 0.00 3.55
915 948 1.204113 AGGAAGGAGGAACCAGCAGG 61.204 60.000 0.00 0.00 42.04 4.85
919 952 1.003696 GACCAAGGAAGGAGGAACCAG 59.996 57.143 0.00 0.00 42.04 4.00
920 953 1.064825 GACCAAGGAAGGAGGAACCA 58.935 55.000 0.00 0.00 42.04 3.67
921 954 0.328592 GGACCAAGGAAGGAGGAACC 59.671 60.000 0.00 0.00 39.35 3.62
922 955 1.279558 GAGGACCAAGGAAGGAGGAAC 59.720 57.143 0.00 0.00 0.00 3.62
923 956 1.657804 GAGGACCAAGGAAGGAGGAA 58.342 55.000 0.00 0.00 0.00 3.36
939 972 0.104120 TGTGTGTTGGTGAGACGAGG 59.896 55.000 0.00 0.00 0.00 4.63
1132 1181 7.084268 AGCTAGCAAACCCAAGAGATATATT 57.916 36.000 18.83 0.00 0.00 1.28
1134 1183 6.782988 ACTAGCTAGCAAACCCAAGAGATATA 59.217 38.462 20.91 0.00 0.00 0.86
1185 1292 5.622687 GCCAGTCAAGAGAAACTAGTCTACC 60.623 48.000 0.00 0.00 0.00 3.18
1186 1293 5.404096 GCCAGTCAAGAGAAACTAGTCTAC 58.596 45.833 0.00 0.00 0.00 2.59
1187 1294 4.463186 GGCCAGTCAAGAGAAACTAGTCTA 59.537 45.833 0.00 0.00 0.00 2.59
1188 1295 3.259625 GGCCAGTCAAGAGAAACTAGTCT 59.740 47.826 0.00 0.00 0.00 3.24
1189 1296 3.591023 GGCCAGTCAAGAGAAACTAGTC 58.409 50.000 0.00 0.00 0.00 2.59
1190 1297 2.303311 GGGCCAGTCAAGAGAAACTAGT 59.697 50.000 4.39 0.00 0.00 2.57
1191 1298 2.303022 TGGGCCAGTCAAGAGAAACTAG 59.697 50.000 0.00 0.00 0.00 2.57
1192 1299 2.303022 CTGGGCCAGTCAAGAGAAACTA 59.697 50.000 25.74 0.00 0.00 2.24
1193 1300 1.072965 CTGGGCCAGTCAAGAGAAACT 59.927 52.381 25.74 0.00 0.00 2.66
1194 1301 1.528129 CTGGGCCAGTCAAGAGAAAC 58.472 55.000 25.74 0.00 0.00 2.78
1195 1302 0.250901 GCTGGGCCAGTCAAGAGAAA 60.251 55.000 32.80 0.00 33.43 2.52
1196 1303 1.376466 GCTGGGCCAGTCAAGAGAA 59.624 57.895 32.80 0.00 33.43 2.87
1197 1304 2.947532 CGCTGGGCCAGTCAAGAGA 61.948 63.158 32.80 0.00 33.43 3.10
1198 1305 2.435586 CGCTGGGCCAGTCAAGAG 60.436 66.667 32.80 14.52 33.43 2.85
1199 1306 3.240134 GACGCTGGGCCAGTCAAGA 62.240 63.158 32.80 0.00 35.19 3.02
1200 1307 2.738213 AAGACGCTGGGCCAGTCAAG 62.738 60.000 32.80 22.91 37.36 3.02
1201 1308 2.731691 GAAGACGCTGGGCCAGTCAA 62.732 60.000 32.80 0.00 37.36 3.18
1202 1309 3.240134 GAAGACGCTGGGCCAGTCA 62.240 63.158 32.80 0.00 37.36 3.41
1203 1310 2.435059 GAAGACGCTGGGCCAGTC 60.435 66.667 32.80 24.10 33.43 3.51
1204 1311 2.456287 GAAGAAGACGCTGGGCCAGT 62.456 60.000 32.80 16.96 33.43 4.00
1205 1312 1.743252 GAAGAAGACGCTGGGCCAG 60.743 63.158 29.44 29.44 34.12 4.85
1206 1313 1.768684 AAGAAGAAGACGCTGGGCCA 61.769 55.000 5.85 5.85 0.00 5.36
1207 1314 0.606673 AAAGAAGAAGACGCTGGGCC 60.607 55.000 0.00 0.00 0.00 5.80
1208 1315 1.197949 GAAAAGAAGAAGACGCTGGGC 59.802 52.381 0.00 0.00 0.00 5.36
1209 1316 1.461127 CGAAAAGAAGAAGACGCTGGG 59.539 52.381 0.00 0.00 0.00 4.45
1210 1317 2.135933 ACGAAAAGAAGAAGACGCTGG 58.864 47.619 0.00 0.00 0.00 4.85
1259 1376 3.951775 AAGAGACTGCAACCTAGAGTG 57.048 47.619 0.00 0.00 0.00 3.51
1319 1436 7.093024 CCCCACAGGATTATTATTACTCCGTAT 60.093 40.741 0.00 0.00 38.24 3.06
1320 1437 6.211986 CCCCACAGGATTATTATTACTCCGTA 59.788 42.308 0.00 0.00 38.24 4.02
1321 1438 5.012768 CCCCACAGGATTATTATTACTCCGT 59.987 44.000 0.00 0.00 38.24 4.69
1322 1439 5.012768 ACCCCACAGGATTATTATTACTCCG 59.987 44.000 0.00 0.00 39.89 4.63
1324 1441 7.746703 AGAACCCCACAGGATTATTATTACTC 58.253 38.462 0.00 0.00 39.89 2.59
1325 1442 7.572861 AGAGAACCCCACAGGATTATTATTACT 59.427 37.037 0.00 0.00 39.89 2.24
1326 1443 7.746703 AGAGAACCCCACAGGATTATTATTAC 58.253 38.462 0.00 0.00 39.89 1.89
1328 1445 6.848562 AGAGAACCCCACAGGATTATTATT 57.151 37.500 0.00 0.00 39.89 1.40
1329 1446 6.848562 AAGAGAACCCCACAGGATTATTAT 57.151 37.500 0.00 0.00 39.89 1.28
1330 1447 6.011981 ACAAAGAGAACCCCACAGGATTATTA 60.012 38.462 0.00 0.00 39.89 0.98
1331 1448 5.222337 ACAAAGAGAACCCCACAGGATTATT 60.222 40.000 0.00 0.00 39.89 1.40
1332 1449 4.292306 ACAAAGAGAACCCCACAGGATTAT 59.708 41.667 0.00 0.00 39.89 1.28
1333 1450 3.655777 ACAAAGAGAACCCCACAGGATTA 59.344 43.478 0.00 0.00 39.89 1.75
1334 1451 2.447047 ACAAAGAGAACCCCACAGGATT 59.553 45.455 0.00 0.00 39.89 3.01
1335 1452 2.065799 ACAAAGAGAACCCCACAGGAT 58.934 47.619 0.00 0.00 39.89 3.24
1336 1453 1.518367 ACAAAGAGAACCCCACAGGA 58.482 50.000 0.00 0.00 39.89 3.86
1337 1454 2.364972 AACAAAGAGAACCCCACAGG 57.635 50.000 0.00 0.00 43.78 4.00
1338 1455 3.447229 ACAAAACAAAGAGAACCCCACAG 59.553 43.478 0.00 0.00 0.00 3.66
1339 1456 3.436243 ACAAAACAAAGAGAACCCCACA 58.564 40.909 0.00 0.00 0.00 4.17
1340 1457 3.445805 TGACAAAACAAAGAGAACCCCAC 59.554 43.478 0.00 0.00 0.00 4.61
1341 1458 3.702792 TGACAAAACAAAGAGAACCCCA 58.297 40.909 0.00 0.00 0.00 4.96
1387 1520 8.686334 TGAAAGAAAAGTAAATTTCAGAGTGCT 58.314 29.630 0.00 0.00 40.89 4.40
1388 1521 8.856490 TGAAAGAAAAGTAAATTTCAGAGTGC 57.144 30.769 0.00 0.00 40.89 4.40
1394 1527 9.762933 CCTTGGATGAAAGAAAAGTAAATTTCA 57.237 29.630 0.00 2.10 43.54 2.69
1989 2228 1.068250 GGGCGATCCTCCTTCTTCG 59.932 63.158 0.00 0.00 34.83 3.79
2473 2813 4.533919 TTCAAGGTATGCCAAATTGGTG 57.466 40.909 14.17 2.11 40.46 4.17
2474 2814 5.760484 ATTTCAAGGTATGCCAAATTGGT 57.240 34.783 14.17 0.00 40.46 3.67
2475 2815 5.163733 GCAATTTCAAGGTATGCCAAATTGG 60.164 40.000 24.92 7.84 41.29 3.16
2588 2928 3.430895 GGTTGCTCAAAATCTTGCACATG 59.569 43.478 0.00 0.00 35.01 3.21
2667 3007 9.813826 ATTAATATGGAATGGAGGGAGTAAAAG 57.186 33.333 0.00 0.00 0.00 2.27
2713 3053 7.504924 AATTTAGCACAAAGTTGTACTGCTA 57.495 32.000 7.10 8.45 39.91 3.49
2869 3576 4.510038 TTTGCTCAATTTCTGCTTCTCC 57.490 40.909 0.00 0.00 0.00 3.71
2890 3597 3.308188 CCACGGAGGAAAGGGTTTCTAAT 60.308 47.826 0.00 0.00 41.22 1.73
2891 3598 2.039348 CCACGGAGGAAAGGGTTTCTAA 59.961 50.000 0.00 0.00 41.22 2.10
2892 3599 1.626825 CCACGGAGGAAAGGGTTTCTA 59.373 52.381 0.00 0.00 41.22 2.10
2950 3657 8.627208 AATGCAAGACTTGACCAATATATAGG 57.373 34.615 19.51 0.00 0.00 2.57
2979 3686 7.272244 ACATGTGAACCAACAGATTATCGATA 58.728 34.615 0.00 0.00 32.52 2.92
2980 3687 6.115446 ACATGTGAACCAACAGATTATCGAT 58.885 36.000 2.16 2.16 32.52 3.59
2981 3688 5.487433 ACATGTGAACCAACAGATTATCGA 58.513 37.500 0.00 0.00 32.52 3.59
3006 3714 6.493115 TCTTCTTTTCACATGCCCATTTTCTA 59.507 34.615 0.00 0.00 0.00 2.10
3202 3919 0.031857 TTCGAGAACCGTTGGCGTTA 59.968 50.000 0.00 0.00 39.75 3.18
3307 4024 1.376942 CCTGTGCTGCTGCTTAGCT 60.377 57.895 17.00 0.00 41.66 3.32
3308 4025 3.048941 GCCTGTGCTGCTGCTTAGC 62.049 63.158 17.00 10.31 41.49 3.09
3334 4051 1.139853 GAGAGGCATACAAGAGGTGGG 59.860 57.143 0.00 0.00 0.00 4.61
3377 4096 4.899457 ACATGCCCACATAAGCTACTACTA 59.101 41.667 0.00 0.00 33.67 1.82
3378 4097 3.711704 ACATGCCCACATAAGCTACTACT 59.288 43.478 0.00 0.00 33.67 2.57
3379 4098 4.073293 ACATGCCCACATAAGCTACTAC 57.927 45.455 0.00 0.00 33.67 2.73
3380 4099 4.771114 AACATGCCCACATAAGCTACTA 57.229 40.909 0.00 0.00 33.67 1.82
3381 4100 3.652057 AACATGCCCACATAAGCTACT 57.348 42.857 0.00 0.00 33.67 2.57
3382 4101 3.947834 AGAAACATGCCCACATAAGCTAC 59.052 43.478 0.00 0.00 33.67 3.58
3383 4102 4.235079 AGAAACATGCCCACATAAGCTA 57.765 40.909 0.00 0.00 33.67 3.32
3384 4103 3.091633 AGAAACATGCCCACATAAGCT 57.908 42.857 0.00 0.00 33.67 3.74
3385 4104 3.193267 TCAAGAAACATGCCCACATAAGC 59.807 43.478 0.00 0.00 33.67 3.09
3492 4263 2.430921 CTGACGACGGCTGTGACC 60.431 66.667 0.80 0.00 0.00 4.02
3579 4362 7.442969 CACAACCTCAATAACTTGTAGGTTACA 59.557 37.037 15.43 0.00 43.42 2.41
3606 4402 5.812127 GTCCCTGACATTAAAAATGGAATGC 59.188 40.000 4.78 0.00 36.67 3.56
3607 4403 6.340522 GGTCCCTGACATTAAAAATGGAATG 58.659 40.000 4.78 0.00 38.70 2.67
3608 4404 5.425217 GGGTCCCTGACATTAAAAATGGAAT 59.575 40.000 0.00 0.00 33.68 3.01
3609 4405 4.775253 GGGTCCCTGACATTAAAAATGGAA 59.225 41.667 0.00 0.00 33.68 3.53
3610 4406 4.349365 GGGTCCCTGACATTAAAAATGGA 58.651 43.478 0.00 0.00 33.68 3.41
3632 4428 1.080093 TCTTGGCGCTGTTACTCCG 60.080 57.895 7.64 0.00 0.00 4.63
3788 4584 1.671379 GACAAGTCTGGCCGGGAAC 60.671 63.158 12.87 3.08 0.00 3.62
3801 4597 3.862124 CGGCTCGGACTTGACAAG 58.138 61.111 13.77 13.77 0.00 3.16
3893 4689 0.669625 GGAGGTCGAAGTGTTTCCGG 60.670 60.000 0.00 0.00 0.00 5.14
3905 4701 1.066587 GAATGCGAGGAGGAGGTCG 59.933 63.158 0.00 0.00 39.25 4.79
3911 4710 0.457851 AAGAGACGAATGCGAGGAGG 59.542 55.000 0.00 0.00 41.64 4.30
3992 4791 0.806102 GAGCCGCAGTCGCAGAAATA 60.806 55.000 0.00 0.00 39.69 1.40
4067 4883 7.189693 TCAGCCAAAATCATCGTATTGATAC 57.810 36.000 0.00 0.00 35.29 2.24
4068 4884 7.800155 TTCAGCCAAAATCATCGTATTGATA 57.200 32.000 0.00 0.00 35.29 2.15
4069 4885 6.698008 TTCAGCCAAAATCATCGTATTGAT 57.302 33.333 0.00 0.00 37.96 2.57
4070 4886 6.507958 TTTCAGCCAAAATCATCGTATTGA 57.492 33.333 0.00 0.00 0.00 2.57
4071 4887 6.034898 GGTTTTCAGCCAAAATCATCGTATTG 59.965 38.462 0.00 0.00 35.42 1.90
4072 4888 6.099341 GGTTTTCAGCCAAAATCATCGTATT 58.901 36.000 0.00 0.00 35.42 1.89
4073 4889 5.184864 TGGTTTTCAGCCAAAATCATCGTAT 59.815 36.000 1.17 0.00 39.72 3.06
4074 4890 4.520874 TGGTTTTCAGCCAAAATCATCGTA 59.479 37.500 1.17 0.00 39.72 3.43
4075 4891 3.320541 TGGTTTTCAGCCAAAATCATCGT 59.679 39.130 1.17 0.00 39.72 3.73
4076 4892 3.674753 GTGGTTTTCAGCCAAAATCATCG 59.325 43.478 7.50 0.00 45.04 3.84
4123 4939 6.569801 CGCTCCATAAATTATACAGACCGAGA 60.570 42.308 0.00 0.00 0.00 4.04
4129 6741 4.684242 CGCACGCTCCATAAATTATACAGA 59.316 41.667 0.00 0.00 0.00 3.41
4170 6782 2.374184 TCAAATATGGAGGGTTTGCGG 58.626 47.619 0.00 0.00 33.90 5.69
4171 6783 4.362279 CATTCAAATATGGAGGGTTTGCG 58.638 43.478 0.00 0.00 33.90 4.85
4172 6784 4.122046 GCATTCAAATATGGAGGGTTTGC 58.878 43.478 0.00 0.00 33.90 3.68
4173 6785 5.353938 CAGCATTCAAATATGGAGGGTTTG 58.646 41.667 0.00 0.00 34.90 2.93
4174 6786 4.406649 CCAGCATTCAAATATGGAGGGTTT 59.593 41.667 0.00 0.00 32.55 3.27
4175 6787 3.962718 CCAGCATTCAAATATGGAGGGTT 59.037 43.478 0.00 0.00 32.55 4.11
4176 6788 3.569491 CCAGCATTCAAATATGGAGGGT 58.431 45.455 0.00 0.00 32.55 4.34
4177 6789 2.895404 CCCAGCATTCAAATATGGAGGG 59.105 50.000 7.42 0.00 32.55 4.30
4192 6804 1.559682 GAATAGTTCACTCCCCCAGCA 59.440 52.381 0.00 0.00 0.00 4.41
4238 6850 2.586792 CAGGAGGAAAGGCCGAGG 59.413 66.667 0.00 0.00 43.43 4.63
4254 6866 1.134818 CCATTGACTAGGCTACACGCA 60.135 52.381 0.00 0.00 41.67 5.24
4278 6890 0.250510 TGGCAGCCATACGAACAACA 60.251 50.000 11.22 0.00 0.00 3.33
4302 6914 0.798159 CTACTGCATTGACAAGCGCA 59.202 50.000 11.47 12.90 0.00 6.09
4305 6917 3.002791 TGTAGCTACTGCATTGACAAGC 58.997 45.455 23.84 0.00 42.74 4.01
4324 6936 6.274674 TCTTCCTGATGGATATGGGATATGT 58.725 40.000 0.00 0.00 42.81 2.29
4340 6952 4.191544 CCATTAATTGACGCTCTTCCTGA 58.808 43.478 0.00 0.00 0.00 3.86
4367 6979 3.330267 GGAAATGAGAGTGAGAAGCGTT 58.670 45.455 0.00 0.00 0.00 4.84
4368 6980 2.354203 GGGAAATGAGAGTGAGAAGCGT 60.354 50.000 0.00 0.00 0.00 5.07
4372 6984 3.056536 CGAGTGGGAAATGAGAGTGAGAA 60.057 47.826 0.00 0.00 0.00 2.87
4373 6985 2.493675 CGAGTGGGAAATGAGAGTGAGA 59.506 50.000 0.00 0.00 0.00 3.27
4374 6986 2.493675 TCGAGTGGGAAATGAGAGTGAG 59.506 50.000 0.00 0.00 0.00 3.51
4377 6989 1.205893 GCTCGAGTGGGAAATGAGAGT 59.794 52.381 15.13 0.00 0.00 3.24
4381 6993 2.013563 GCATGCTCGAGTGGGAAATGA 61.014 52.381 15.13 0.00 0.00 2.57
4382 6994 0.379669 GCATGCTCGAGTGGGAAATG 59.620 55.000 15.13 9.52 0.00 2.32
4408 7041 4.035091 TGTTTGTATGCGAGCAATATCCAC 59.965 41.667 0.57 0.00 0.00 4.02
4414 7047 1.804151 ACGTGTTTGTATGCGAGCAAT 59.196 42.857 0.57 0.00 0.00 3.56
4418 7051 2.284457 CGATGACGTGTTTGTATGCGAG 60.284 50.000 0.00 0.00 34.56 5.03
4420 7053 2.057847 CGATGACGTGTTTGTATGCG 57.942 50.000 0.00 0.00 34.56 4.73
4432 7065 2.880879 CGAGGGTGCACGATGACG 60.881 66.667 11.45 8.29 45.75 4.35
4433 7066 1.805945 GTCGAGGGTGCACGATGAC 60.806 63.158 11.45 11.98 40.50 3.06
4434 7067 2.571757 GTCGAGGGTGCACGATGA 59.428 61.111 11.45 3.12 40.50 2.92
4436 7069 4.796231 GCGTCGAGGGTGCACGAT 62.796 66.667 11.45 0.62 40.50 3.73
4451 7084 2.030562 GGTGTATCATCCCCGGCG 59.969 66.667 0.00 0.00 0.00 6.46
4457 7090 3.579709 CGTGAGCTATGGTGTATCATCC 58.420 50.000 0.00 0.00 0.00 3.51
4486 7119 2.267681 CTTCCGGACGGTCTCCTTCG 62.268 65.000 1.83 2.54 36.80 3.79
4489 7122 1.977544 CACTTCCGGACGGTCTCCT 60.978 63.158 13.17 0.00 36.80 3.69
4493 7126 0.813184 TATCACACTTCCGGACGGTC 59.187 55.000 13.17 0.00 36.47 4.79
4499 7133 1.491670 CTCGCATATCACACTTCCGG 58.508 55.000 0.00 0.00 0.00 5.14
4505 7139 2.222678 CCAGATTGCTCGCATATCACAC 59.777 50.000 12.89 0.00 0.00 3.82
4506 7140 2.486918 CCAGATTGCTCGCATATCACA 58.513 47.619 12.89 0.00 0.00 3.58
4507 7141 1.196354 GCCAGATTGCTCGCATATCAC 59.804 52.381 12.89 3.47 0.00 3.06
4508 7142 1.071228 AGCCAGATTGCTCGCATATCA 59.929 47.619 12.89 0.00 36.75 2.15
4510 7144 1.071228 TCAGCCAGATTGCTCGCATAT 59.929 47.619 0.00 0.00 40.32 1.78
4516 7150 1.023513 AAGCGTCAGCCAGATTGCTC 61.024 55.000 6.84 0.00 46.67 4.26
4527 7161 6.526674 GGTTTTGGATGTATAAAAAGCGTCAG 59.473 38.462 0.00 0.00 33.30 3.51
4530 7164 5.336929 GGGGTTTTGGATGTATAAAAAGCGT 60.337 40.000 0.00 0.00 40.45 5.07
4534 7168 6.516860 CGTGTGGGGTTTTGGATGTATAAAAA 60.517 38.462 0.00 0.00 0.00 1.94
4539 7173 2.442413 CGTGTGGGGTTTTGGATGTAT 58.558 47.619 0.00 0.00 0.00 2.29
4542 7176 1.288752 GCGTGTGGGGTTTTGGATG 59.711 57.895 0.00 0.00 0.00 3.51
4547 7181 4.192453 TCGGGCGTGTGGGGTTTT 62.192 61.111 0.00 0.00 0.00 2.43
4551 7185 4.760047 CTTCTCGGGCGTGTGGGG 62.760 72.222 0.00 0.00 0.00 4.96
4597 7232 2.044555 CAGGTCGACGTAGGGCAGA 61.045 63.158 10.91 0.00 0.00 4.26
4641 7276 1.782569 TCGTTCTTCGTTTGTAGTGCG 59.217 47.619 0.00 0.00 40.80 5.34
4672 7307 8.536175 ACTTTCTATCTTCTCTTCTTAACCCTG 58.464 37.037 0.00 0.00 0.00 4.45
4686 7321 9.959775 CGACAAAAACATCTACTTTCTATCTTC 57.040 33.333 0.00 0.00 0.00 2.87
4691 7326 9.268268 ACAATCGACAAAAACATCTACTTTCTA 57.732 29.630 0.00 0.00 0.00 2.10
4692 7327 8.154649 ACAATCGACAAAAACATCTACTTTCT 57.845 30.769 0.00 0.00 0.00 2.52
4694 7329 9.825972 CATACAATCGACAAAAACATCTACTTT 57.174 29.630 0.00 0.00 0.00 2.66
4695 7330 8.999431 ACATACAATCGACAAAAACATCTACTT 58.001 29.630 0.00 0.00 0.00 2.24
4696 7331 8.547967 ACATACAATCGACAAAAACATCTACT 57.452 30.769 0.00 0.00 0.00 2.57
4697 7332 9.051027 CAACATACAATCGACAAAAACATCTAC 57.949 33.333 0.00 0.00 0.00 2.59
4698 7333 8.779303 ACAACATACAATCGACAAAAACATCTA 58.221 29.630 0.00 0.00 0.00 1.98
4699 7334 7.648142 ACAACATACAATCGACAAAAACATCT 58.352 30.769 0.00 0.00 0.00 2.90
4700 7335 7.851822 ACAACATACAATCGACAAAAACATC 57.148 32.000 0.00 0.00 0.00 3.06
4701 7336 7.918033 TGAACAACATACAATCGACAAAAACAT 59.082 29.630 0.00 0.00 0.00 2.71
4702 7337 7.251281 TGAACAACATACAATCGACAAAAACA 58.749 30.769 0.00 0.00 0.00 2.83
4703 7338 7.672351 TGAACAACATACAATCGACAAAAAC 57.328 32.000 0.00 0.00 0.00 2.43
4704 7339 8.864069 ATTGAACAACATACAATCGACAAAAA 57.136 26.923 0.00 0.00 29.89 1.94
4705 7340 8.500837 GATTGAACAACATACAATCGACAAAA 57.499 30.769 0.00 0.00 39.84 2.44
4712 7347 5.163893 ACGACCGATTGAACAACATACAATC 60.164 40.000 0.00 0.00 43.33 2.67
4713 7348 4.693566 ACGACCGATTGAACAACATACAAT 59.306 37.500 0.00 0.00 37.03 2.71
4714 7349 4.059511 ACGACCGATTGAACAACATACAA 58.940 39.130 0.00 0.00 0.00 2.41
4715 7350 3.655486 ACGACCGATTGAACAACATACA 58.345 40.909 0.00 0.00 0.00 2.29
4716 7351 3.676172 TGACGACCGATTGAACAACATAC 59.324 43.478 0.00 0.00 0.00 2.39
4717 7352 3.676172 GTGACGACCGATTGAACAACATA 59.324 43.478 0.00 0.00 0.00 2.29
4718 7353 2.478894 GTGACGACCGATTGAACAACAT 59.521 45.455 0.00 0.00 0.00 2.71
4719 7354 1.862201 GTGACGACCGATTGAACAACA 59.138 47.619 0.00 0.00 0.00 3.33
4720 7355 1.193874 GGTGACGACCGATTGAACAAC 59.806 52.381 0.00 0.00 30.61 3.32
4721 7356 1.504359 GGTGACGACCGATTGAACAA 58.496 50.000 0.00 0.00 30.61 2.83
4722 7357 3.204505 GGTGACGACCGATTGAACA 57.795 52.632 0.00 0.00 30.61 3.18
4731 7366 3.982576 AACAAATGAAAGGTGACGACC 57.017 42.857 0.00 0.00 43.52 4.79
4732 7367 6.359617 CACATAAACAAATGAAAGGTGACGAC 59.640 38.462 0.00 0.00 0.00 4.34
4733 7368 6.434596 CACATAAACAAATGAAAGGTGACGA 58.565 36.000 0.00 0.00 0.00 4.20
4734 7369 5.629020 CCACATAAACAAATGAAAGGTGACG 59.371 40.000 0.00 0.00 0.00 4.35
4735 7370 5.405269 GCCACATAAACAAATGAAAGGTGAC 59.595 40.000 0.00 0.00 0.00 3.67
4736 7371 5.537188 GCCACATAAACAAATGAAAGGTGA 58.463 37.500 0.00 0.00 0.00 4.02
4737 7372 4.385447 CGCCACATAAACAAATGAAAGGTG 59.615 41.667 0.00 0.00 0.00 4.00
4738 7373 4.555262 CGCCACATAAACAAATGAAAGGT 58.445 39.130 0.00 0.00 0.00 3.50
4739 7374 3.925913 CCGCCACATAAACAAATGAAAGG 59.074 43.478 0.00 0.00 0.00 3.11
4740 7375 3.367630 GCCGCCACATAAACAAATGAAAG 59.632 43.478 0.00 0.00 0.00 2.62
4741 7376 3.006323 AGCCGCCACATAAACAAATGAAA 59.994 39.130 0.00 0.00 0.00 2.69
4742 7377 2.560542 AGCCGCCACATAAACAAATGAA 59.439 40.909 0.00 0.00 0.00 2.57
4743 7378 2.166829 AGCCGCCACATAAACAAATGA 58.833 42.857 0.00 0.00 0.00 2.57
4744 7379 2.652941 AGCCGCCACATAAACAAATG 57.347 45.000 0.00 0.00 0.00 2.32
4745 7380 3.377172 GTCTAGCCGCCACATAAACAAAT 59.623 43.478 0.00 0.00 0.00 2.32
4746 7381 2.745281 GTCTAGCCGCCACATAAACAAA 59.255 45.455 0.00 0.00 0.00 2.83
4747 7382 2.027561 AGTCTAGCCGCCACATAAACAA 60.028 45.455 0.00 0.00 0.00 2.83
4748 7383 1.553248 AGTCTAGCCGCCACATAAACA 59.447 47.619 0.00 0.00 0.00 2.83
4749 7384 2.311124 AGTCTAGCCGCCACATAAAC 57.689 50.000 0.00 0.00 0.00 2.01
4750 7385 2.419574 GGAAGTCTAGCCGCCACATAAA 60.420 50.000 0.00 0.00 0.00 1.40
4751 7386 1.138266 GGAAGTCTAGCCGCCACATAA 59.862 52.381 0.00 0.00 0.00 1.90
4752 7387 0.750850 GGAAGTCTAGCCGCCACATA 59.249 55.000 0.00 0.00 0.00 2.29
4753 7388 0.978146 AGGAAGTCTAGCCGCCACAT 60.978 55.000 0.00 0.00 0.00 3.21
4754 7389 0.323999 TAGGAAGTCTAGCCGCCACA 60.324 55.000 0.00 0.00 0.00 4.17
4755 7390 1.041437 ATAGGAAGTCTAGCCGCCAC 58.959 55.000 0.00 0.00 0.00 5.01
4756 7391 2.236766 GTATAGGAAGTCTAGCCGCCA 58.763 52.381 0.00 0.00 0.00 5.69
4757 7392 2.236766 TGTATAGGAAGTCTAGCCGCC 58.763 52.381 0.00 0.00 0.00 6.13
4758 7393 3.568853 TCTTGTATAGGAAGTCTAGCCGC 59.431 47.826 0.00 0.00 0.00 6.53
4759 7394 5.769484 TTCTTGTATAGGAAGTCTAGCCG 57.231 43.478 0.00 0.00 0.00 5.52
4760 7395 6.987404 CCTTTTCTTGTATAGGAAGTCTAGCC 59.013 42.308 0.00 0.00 0.00 3.93
4761 7396 7.707464 GTCCTTTTCTTGTATAGGAAGTCTAGC 59.293 40.741 0.00 0.00 38.46 3.42
4762 7397 8.973182 AGTCCTTTTCTTGTATAGGAAGTCTAG 58.027 37.037 0.00 0.00 38.46 2.43
4763 7398 8.896722 AGTCCTTTTCTTGTATAGGAAGTCTA 57.103 34.615 0.00 0.00 38.46 2.59
4764 7399 7.800300 AGTCCTTTTCTTGTATAGGAAGTCT 57.200 36.000 0.00 0.00 38.46 3.24
4765 7400 8.095169 TGAAGTCCTTTTCTTGTATAGGAAGTC 58.905 37.037 0.00 0.00 38.46 3.01
4766 7401 7.974504 TGAAGTCCTTTTCTTGTATAGGAAGT 58.025 34.615 0.00 0.00 38.46 3.01
4767 7402 8.848474 TTGAAGTCCTTTTCTTGTATAGGAAG 57.152 34.615 0.00 0.00 38.46 3.46
4768 7403 9.807921 ATTTGAAGTCCTTTTCTTGTATAGGAA 57.192 29.630 0.00 0.00 38.46 3.36
4769 7404 9.807921 AATTTGAAGTCCTTTTCTTGTATAGGA 57.192 29.630 0.00 0.00 34.50 2.94
4774 7409 9.965824 GATGAAATTTGAAGTCCTTTTCTTGTA 57.034 29.630 0.00 0.00 0.00 2.41
4775 7410 7.928167 GGATGAAATTTGAAGTCCTTTTCTTGT 59.072 33.333 0.00 0.00 0.00 3.16
4776 7411 7.927629 TGGATGAAATTTGAAGTCCTTTTCTTG 59.072 33.333 0.00 0.00 0.00 3.02
4777 7412 8.021898 TGGATGAAATTTGAAGTCCTTTTCTT 57.978 30.769 0.00 0.00 0.00 2.52
4778 7413 7.601705 TGGATGAAATTTGAAGTCCTTTTCT 57.398 32.000 0.00 0.00 0.00 2.52
4779 7414 8.661352 TTTGGATGAAATTTGAAGTCCTTTTC 57.339 30.769 0.00 0.00 0.00 2.29
4780 7415 9.276590 GATTTGGATGAAATTTGAAGTCCTTTT 57.723 29.630 0.00 0.00 34.18 2.27
4781 7416 7.879677 GGATTTGGATGAAATTTGAAGTCCTTT 59.120 33.333 0.00 0.00 34.18 3.11
4782 7417 7.236225 AGGATTTGGATGAAATTTGAAGTCCTT 59.764 33.333 0.00 0.00 34.18 3.36
4783 7418 6.727697 AGGATTTGGATGAAATTTGAAGTCCT 59.272 34.615 0.00 0.00 34.18 3.85
4784 7419 6.939622 AGGATTTGGATGAAATTTGAAGTCC 58.060 36.000 0.00 0.00 34.18 3.85
4785 7420 7.547019 GGAAGGATTTGGATGAAATTTGAAGTC 59.453 37.037 0.00 0.00 34.18 3.01
4786 7421 7.016465 TGGAAGGATTTGGATGAAATTTGAAGT 59.984 33.333 0.00 0.00 34.18 3.01
4787 7422 7.388437 TGGAAGGATTTGGATGAAATTTGAAG 58.612 34.615 0.00 0.00 34.18 3.02
4788 7423 7.313740 TGGAAGGATTTGGATGAAATTTGAA 57.686 32.000 0.00 0.00 34.18 2.69
4789 7424 6.931790 TGGAAGGATTTGGATGAAATTTGA 57.068 33.333 0.00 0.00 34.18 2.69
4790 7425 7.982761 TTTGGAAGGATTTGGATGAAATTTG 57.017 32.000 0.00 0.00 34.18 2.32
4791 7426 9.234827 GATTTTGGAAGGATTTGGATGAAATTT 57.765 29.630 0.00 0.00 34.18 1.82
4792 7427 8.384718 TGATTTTGGAAGGATTTGGATGAAATT 58.615 29.630 0.00 0.00 34.18 1.82
4793 7428 7.920227 TGATTTTGGAAGGATTTGGATGAAAT 58.080 30.769 0.00 0.00 36.94 2.17
4794 7429 7.313740 TGATTTTGGAAGGATTTGGATGAAA 57.686 32.000 0.00 0.00 0.00 2.69
4795 7430 6.931790 TGATTTTGGAAGGATTTGGATGAA 57.068 33.333 0.00 0.00 0.00 2.57
4796 7431 6.497954 AGTTGATTTTGGAAGGATTTGGATGA 59.502 34.615 0.00 0.00 0.00 2.92
4797 7432 6.592607 CAGTTGATTTTGGAAGGATTTGGATG 59.407 38.462 0.00 0.00 0.00 3.51
4798 7433 6.497954 TCAGTTGATTTTGGAAGGATTTGGAT 59.502 34.615 0.00 0.00 0.00 3.41
4799 7434 5.837979 TCAGTTGATTTTGGAAGGATTTGGA 59.162 36.000 0.00 0.00 0.00 3.53
4800 7435 6.100404 TCAGTTGATTTTGGAAGGATTTGG 57.900 37.500 0.00 0.00 0.00 3.28
4801 7436 7.212274 AGTTCAGTTGATTTTGGAAGGATTTG 58.788 34.615 0.00 0.00 0.00 2.32
4802 7437 7.365497 AGTTCAGTTGATTTTGGAAGGATTT 57.635 32.000 0.00 0.00 0.00 2.17
4803 7438 6.294176 CGAGTTCAGTTGATTTTGGAAGGATT 60.294 38.462 0.00 0.00 0.00 3.01
4804 7439 5.182001 CGAGTTCAGTTGATTTTGGAAGGAT 59.818 40.000 0.00 0.00 0.00 3.24
4805 7440 4.515191 CGAGTTCAGTTGATTTTGGAAGGA 59.485 41.667 0.00 0.00 0.00 3.36
4806 7441 4.275936 ACGAGTTCAGTTGATTTTGGAAGG 59.724 41.667 0.00 0.00 0.00 3.46
4807 7442 5.424121 ACGAGTTCAGTTGATTTTGGAAG 57.576 39.130 0.00 0.00 0.00 3.46
4808 7443 7.504924 AATACGAGTTCAGTTGATTTTGGAA 57.495 32.000 0.00 0.00 0.00 3.53
4809 7444 7.504924 AAATACGAGTTCAGTTGATTTTGGA 57.495 32.000 0.00 0.00 0.00 3.53
4810 7445 7.962918 CCTAAATACGAGTTCAGTTGATTTTGG 59.037 37.037 0.00 0.00 0.00 3.28
4811 7446 8.504005 ACCTAAATACGAGTTCAGTTGATTTTG 58.496 33.333 0.00 0.00 0.00 2.44
4812 7447 8.617290 ACCTAAATACGAGTTCAGTTGATTTT 57.383 30.769 0.00 0.00 0.00 1.82
4813 7448 9.715121 TTACCTAAATACGAGTTCAGTTGATTT 57.285 29.630 0.00 0.00 0.00 2.17
4814 7449 9.367444 CTTACCTAAATACGAGTTCAGTTGATT 57.633 33.333 0.00 0.00 0.00 2.57
4815 7450 8.529476 ACTTACCTAAATACGAGTTCAGTTGAT 58.471 33.333 0.00 0.00 0.00 2.57
4816 7451 7.889469 ACTTACCTAAATACGAGTTCAGTTGA 58.111 34.615 0.00 0.00 0.00 3.18
4817 7452 8.027771 AGACTTACCTAAATACGAGTTCAGTTG 58.972 37.037 0.00 0.00 0.00 3.16
4818 7453 8.120140 AGACTTACCTAAATACGAGTTCAGTT 57.880 34.615 0.00 0.00 0.00 3.16
4819 7454 7.700022 AGACTTACCTAAATACGAGTTCAGT 57.300 36.000 0.00 0.00 0.00 3.41
4820 7455 9.719279 CTTAGACTTACCTAAATACGAGTTCAG 57.281 37.037 0.00 0.00 0.00 3.02
4821 7456 9.453572 TCTTAGACTTACCTAAATACGAGTTCA 57.546 33.333 0.00 0.00 0.00 3.18
4822 7457 9.715123 GTCTTAGACTTACCTAAATACGAGTTC 57.285 37.037 4.94 0.00 0.00 3.01
4823 7458 9.236006 TGTCTTAGACTTACCTAAATACGAGTT 57.764 33.333 13.86 0.00 33.15 3.01
4824 7459 8.798859 TGTCTTAGACTTACCTAAATACGAGT 57.201 34.615 13.86 0.00 33.15 4.18
4825 7460 9.881529 GATGTCTTAGACTTACCTAAATACGAG 57.118 37.037 13.86 0.00 33.15 4.18
4826 7461 9.399797 TGATGTCTTAGACTTACCTAAATACGA 57.600 33.333 13.86 0.00 33.15 3.43
4831 7466 9.582431 CGAATTGATGTCTTAGACTTACCTAAA 57.418 33.333 13.86 0.00 33.15 1.85
4832 7467 8.963725 TCGAATTGATGTCTTAGACTTACCTAA 58.036 33.333 13.86 2.52 33.15 2.69
4833 7468 8.515695 TCGAATTGATGTCTTAGACTTACCTA 57.484 34.615 13.86 0.00 33.15 3.08
4834 7469 7.406031 TCGAATTGATGTCTTAGACTTACCT 57.594 36.000 13.86 0.00 33.15 3.08
4835 7470 8.649973 AATCGAATTGATGTCTTAGACTTACC 57.350 34.615 13.86 1.22 37.39 2.85
4838 7473 9.831737 CAAAAATCGAATTGATGTCTTAGACTT 57.168 29.630 13.86 7.21 37.39 3.01
4839 7474 8.454106 CCAAAAATCGAATTGATGTCTTAGACT 58.546 33.333 13.86 0.00 37.39 3.24
4840 7475 8.450964 TCCAAAAATCGAATTGATGTCTTAGAC 58.549 33.333 5.27 5.27 37.39 2.59
4841 7476 8.560355 TCCAAAAATCGAATTGATGTCTTAGA 57.440 30.769 9.69 0.00 37.39 2.10
4842 7477 9.443283 GATCCAAAAATCGAATTGATGTCTTAG 57.557 33.333 9.69 0.00 37.39 2.18
4843 7478 8.405531 GGATCCAAAAATCGAATTGATGTCTTA 58.594 33.333 6.95 0.00 37.39 2.10
4844 7479 7.123247 AGGATCCAAAAATCGAATTGATGTCTT 59.877 33.333 15.82 1.25 37.39 3.01
4845 7480 6.604795 AGGATCCAAAAATCGAATTGATGTCT 59.395 34.615 15.82 1.93 37.39 3.41
4846 7481 6.799512 AGGATCCAAAAATCGAATTGATGTC 58.200 36.000 15.82 5.60 37.39 3.06
4847 7482 6.780457 AGGATCCAAAAATCGAATTGATGT 57.220 33.333 15.82 0.00 37.39 3.06
4848 7483 7.859377 CAGTAGGATCCAAAAATCGAATTGATG 59.141 37.037 15.82 2.37 37.39 3.07
4849 7484 7.013655 CCAGTAGGATCCAAAAATCGAATTGAT 59.986 37.037 15.82 0.00 36.32 2.57
4850 7485 6.318648 CCAGTAGGATCCAAAAATCGAATTGA 59.681 38.462 15.82 0.00 36.89 2.57
4851 7486 6.498304 CCAGTAGGATCCAAAAATCGAATTG 58.502 40.000 15.82 0.00 36.89 2.32
4852 7487 5.067805 GCCAGTAGGATCCAAAAATCGAATT 59.932 40.000 15.82 0.00 36.89 2.17
4853 7488 4.580580 GCCAGTAGGATCCAAAAATCGAAT 59.419 41.667 15.82 0.00 36.89 3.34
4854 7489 3.945285 GCCAGTAGGATCCAAAAATCGAA 59.055 43.478 15.82 0.00 36.89 3.71
4855 7490 3.541632 GCCAGTAGGATCCAAAAATCGA 58.458 45.455 15.82 0.00 36.89 3.59
4856 7491 2.618709 GGCCAGTAGGATCCAAAAATCG 59.381 50.000 15.82 0.00 36.89 3.34
4857 7492 3.381590 GTGGCCAGTAGGATCCAAAAATC 59.618 47.826 15.82 0.00 36.89 2.17
4858 7493 3.245586 TGTGGCCAGTAGGATCCAAAAAT 60.246 43.478 15.82 0.00 36.89 1.82
4859 7494 2.109128 TGTGGCCAGTAGGATCCAAAAA 59.891 45.455 15.82 0.00 36.89 1.94
4860 7495 1.707989 TGTGGCCAGTAGGATCCAAAA 59.292 47.619 15.82 0.00 36.89 2.44
4861 7496 1.367346 TGTGGCCAGTAGGATCCAAA 58.633 50.000 15.82 0.00 36.89 3.28
4862 7497 1.367346 TTGTGGCCAGTAGGATCCAA 58.633 50.000 15.82 0.29 36.89 3.53
4863 7498 1.004277 GTTTGTGGCCAGTAGGATCCA 59.996 52.381 15.82 0.00 36.89 3.41
4864 7499 1.751437 GTTTGTGGCCAGTAGGATCC 58.249 55.000 5.11 2.48 36.89 3.36
4865 7500 1.369625 CGTTTGTGGCCAGTAGGATC 58.630 55.000 5.11 0.00 36.89 3.36
4866 7501 3.551259 CGTTTGTGGCCAGTAGGAT 57.449 52.632 5.11 0.00 36.89 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.