Multiple sequence alignment - TraesCS3A01G192000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G192000 chr3A 100.000 3640 0 0 1 3640 247729114 247732753 0.000000e+00 6722
1 TraesCS3A01G192000 chr3A 100.000 1624 0 0 4020 5643 247733133 247734756 0.000000e+00 3000
2 TraesCS3A01G192000 chr3A 98.176 329 6 0 5146 5474 247734096 247734424 4.900000e-160 575
3 TraesCS3A01G192000 chr3A 98.176 329 6 0 4983 5311 247734259 247734587 4.900000e-160 575
4 TraesCS3A01G192000 chr3A 96.386 166 6 0 5309 5474 247734096 247734261 2.000000e-69 274
5 TraesCS3A01G192000 chr3A 96.386 166 6 0 4983 5148 247734422 247734587 2.000000e-69 274
6 TraesCS3A01G192000 chr3A 92.079 101 6 2 4215 4313 247732472 247732372 2.120000e-29 141
7 TraesCS3A01G192000 chr3A 92.079 101 6 2 3259 3359 247733426 247733328 2.120000e-29 141
8 TraesCS3A01G192000 chr3D 94.649 3308 67 26 1 3267 188813587 188816825 0.000000e+00 5027
9 TraesCS3A01G192000 chr3D 93.638 1116 38 12 4020 5122 188817254 188818349 0.000000e+00 1637
10 TraesCS3A01G192000 chr3D 92.617 298 8 8 3345 3640 188816831 188817116 3.140000e-112 416
11 TraesCS3A01G192000 chr3D 85.373 335 19 3 5309 5617 188818214 188818544 2.540000e-83 320
12 TraesCS3A01G192000 chr3D 92.857 140 6 2 5146 5285 188818214 188818349 3.450000e-47 200
13 TraesCS3A01G192000 chr3B 95.006 3104 70 35 1 3074 271819333 271822381 0.000000e+00 4795
14 TraesCS3A01G192000 chr3B 90.853 1126 44 14 4020 5144 271823507 271824574 0.000000e+00 1454
15 TraesCS3A01G192000 chr3B 92.308 364 11 7 3283 3640 271822750 271823102 8.440000e-138 501
16 TraesCS3A01G192000 chr3B 90.615 309 16 4 5309 5617 271824417 271824712 1.140000e-106 398
17 TraesCS3A01G192000 chr3B 96.392 194 7 0 3057 3250 271822560 271822753 2.540000e-83 320
18 TraesCS3A01G192000 chr3B 93.210 162 7 2 5146 5307 271824417 271824574 9.450000e-58 235


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G192000 chr3A 247729114 247734756 5642 False 1903.333333 6722 98.187333 1 5643 6 chr3A.!!$F1 5642
1 TraesCS3A01G192000 chr3D 188813587 188818544 4957 False 1520.000000 5027 91.826800 1 5617 5 chr3D.!!$F1 5616
2 TraesCS3A01G192000 chr3B 271819333 271824712 5379 False 1283.833333 4795 93.064000 1 5617 6 chr3B.!!$F1 5616

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
900 946 0.104671 GGCAGCATCTCACCTCTCTC 59.895 60.000 0.0 0.0 0.00 3.20 F
1470 1516 0.806868 GGTCGTACCTGTCATCGTCA 59.193 55.000 0.0 0.0 34.73 4.35 F
2829 2902 1.203038 TGACCCCATGAACATTGCAGT 60.203 47.619 0.0 0.0 0.00 4.40 F
3336 3606 0.032130 TGACCTCGTTGACTGCTGAC 59.968 55.000 0.0 0.0 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1940 2012 0.038166 GGAGCCCACAGGAACATGAA 59.962 55.0 0.0 0.0 33.47 2.57 R
2991 3065 0.108138 GGGGAGACGATGAACCAGTG 60.108 60.0 0.0 0.0 0.00 3.66 R
4196 4498 1.194218 GGGTGTGCCAAATAAGCCAT 58.806 50.0 0.0 0.0 36.17 4.40 R
4968 5283 0.178967 TGGTGGAAAGCAGCAATGGA 60.179 50.0 0.0 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 9.753674 ACAATTCCTATCAACAAAAATCCTCTA 57.246 29.630 0.00 0.00 0.00 2.43
44 45 9.621629 TCAACAAAAATCCTCTACTAAACTTGA 57.378 29.630 0.00 0.00 0.00 3.02
67 68 1.131638 TGAATTCTCCATCCCCTCCG 58.868 55.000 7.05 0.00 0.00 4.63
258 283 0.600255 CGCCAGAAACGAGTTCCACT 60.600 55.000 0.00 0.00 36.86 4.00
640 673 0.466922 TCCCTCCCGTCCGAGTAATC 60.467 60.000 0.00 0.00 0.00 1.75
900 946 0.104671 GGCAGCATCTCACCTCTCTC 59.895 60.000 0.00 0.00 0.00 3.20
985 1031 3.378602 TGCTCCACGCCTCGCTTA 61.379 61.111 0.00 0.00 38.05 3.09
1197 1243 4.740822 GTGGACGCCATGCCCCTT 62.741 66.667 1.90 0.00 35.28 3.95
1380 1426 1.078143 GGAAAGGTGCAGGAGCGAT 60.078 57.895 0.00 0.00 46.23 4.58
1470 1516 0.806868 GGTCGTACCTGTCATCGTCA 59.193 55.000 0.00 0.00 34.73 4.35
1666 1712 3.385384 TCCACCTGGAGAGCAGCG 61.385 66.667 0.00 0.00 39.78 5.18
1754 1800 8.861033 GCAGTTGCTATGATTTCATTTCATTA 57.139 30.769 0.00 0.00 37.76 1.90
1755 1801 9.472361 GCAGTTGCTATGATTTCATTTCATTAT 57.528 29.630 0.00 0.00 37.76 1.28
1868 1915 8.792830 AGCAAGCTGTAGAGTAATCATTTAAA 57.207 30.769 0.00 0.00 0.00 1.52
1933 2005 3.631686 CCAGTTGAGTTGTTCATGTTCCA 59.368 43.478 0.00 0.00 35.27 3.53
1934 2006 4.261322 CCAGTTGAGTTGTTCATGTTCCAG 60.261 45.833 0.00 0.00 35.27 3.86
1935 2007 4.576053 CAGTTGAGTTGTTCATGTTCCAGA 59.424 41.667 0.00 0.00 35.27 3.86
1936 2008 4.818546 AGTTGAGTTGTTCATGTTCCAGAG 59.181 41.667 0.00 0.00 35.27 3.35
1937 2009 3.141398 TGAGTTGTTCATGTTCCAGAGC 58.859 45.455 0.00 0.00 0.00 4.09
1938 2010 3.181451 TGAGTTGTTCATGTTCCAGAGCT 60.181 43.478 0.00 0.00 0.00 4.09
1939 2011 3.144506 AGTTGTTCATGTTCCAGAGCTG 58.855 45.455 0.00 0.00 0.00 4.24
1940 2012 2.880890 GTTGTTCATGTTCCAGAGCTGT 59.119 45.455 0.00 0.00 0.00 4.40
1941 2013 3.213206 TGTTCATGTTCCAGAGCTGTT 57.787 42.857 0.00 0.00 0.00 3.16
1942 2014 3.141398 TGTTCATGTTCCAGAGCTGTTC 58.859 45.455 0.00 0.00 0.00 3.18
1943 2015 3.141398 GTTCATGTTCCAGAGCTGTTCA 58.859 45.455 0.00 0.00 0.00 3.18
1944 2016 3.708403 TCATGTTCCAGAGCTGTTCAT 57.292 42.857 0.00 0.00 0.00 2.57
1945 2017 3.340928 TCATGTTCCAGAGCTGTTCATG 58.659 45.455 0.00 14.56 35.03 3.07
1946 2018 2.936919 TGTTCCAGAGCTGTTCATGT 57.063 45.000 0.00 0.00 0.00 3.21
1947 2019 3.213206 TGTTCCAGAGCTGTTCATGTT 57.787 42.857 0.00 0.00 0.00 2.71
1948 2020 3.141398 TGTTCCAGAGCTGTTCATGTTC 58.859 45.455 0.00 0.00 0.00 3.18
1949 2021 2.479566 TCCAGAGCTGTTCATGTTCC 57.520 50.000 0.00 0.00 0.00 3.62
1950 2022 1.980765 TCCAGAGCTGTTCATGTTCCT 59.019 47.619 0.00 0.00 0.00 3.36
1951 2023 2.082231 CCAGAGCTGTTCATGTTCCTG 58.918 52.381 0.00 0.00 0.00 3.86
2008 2080 6.140110 CGGTATTTCTGTTTCGTTTGACAAT 58.860 36.000 0.00 0.00 0.00 2.71
2128 2200 1.723003 CGTTCCACGCAAGGTACTAAC 59.277 52.381 0.00 0.00 46.39 2.34
2187 2259 3.508845 ATGGTTTCTAGGCACACAACT 57.491 42.857 0.00 0.00 0.00 3.16
2188 2260 4.634012 ATGGTTTCTAGGCACACAACTA 57.366 40.909 0.00 0.00 0.00 2.24
2189 2261 4.002906 TGGTTTCTAGGCACACAACTAG 57.997 45.455 0.00 0.00 38.38 2.57
2190 2262 3.644265 TGGTTTCTAGGCACACAACTAGA 59.356 43.478 0.00 0.00 42.77 2.43
2191 2263 4.246458 GGTTTCTAGGCACACAACTAGAG 58.754 47.826 0.00 0.00 44.50 2.43
2223 2295 6.721208 AGATGATTCATACCTCTCTCTTCCTC 59.279 42.308 0.00 0.00 0.00 3.71
2339 2412 1.465354 CGACGAACCGTAGTCTTGGAG 60.465 57.143 0.00 0.00 41.37 3.86
2495 2568 2.555227 CCCATATGGTATGTTCCCAGGC 60.555 54.545 20.46 0.00 34.92 4.85
2566 2639 7.966339 AAACATTGCCATATGGATATGCTAT 57.034 32.000 26.47 13.05 38.99 2.97
2741 2814 8.417884 AGTGGTGAGAATAGCTTTAATCTCTAC 58.582 37.037 14.72 11.74 39.21 2.59
2805 2878 7.775093 AGTTGCATATACATAGGCTTTTCAGAA 59.225 33.333 7.33 0.00 40.42 3.02
2829 2902 1.203038 TGACCCCATGAACATTGCAGT 60.203 47.619 0.00 0.00 0.00 4.40
2870 2943 8.938801 TTATAATACAACATCATGGCCTCAAT 57.061 30.769 3.32 0.00 0.00 2.57
2925 2998 4.935808 AGTGTTAGTCCGAAAATGATGACC 59.064 41.667 0.00 0.00 0.00 4.02
3017 3091 1.403814 TCATCGTCTCCCCACTCATC 58.596 55.000 0.00 0.00 0.00 2.92
3204 3474 1.341976 ACTTGCCAACCCTGAACTTGT 60.342 47.619 0.00 0.00 0.00 3.16
3239 3509 6.499106 AGATTCAACCCCAAACTTCAAAAT 57.501 33.333 0.00 0.00 0.00 1.82
3267 3537 0.616395 CCACACCCCAAATAACCCCC 60.616 60.000 0.00 0.00 0.00 5.40
3281 3551 2.595655 CCCCCGGGTTCAGGAATC 59.404 66.667 21.85 0.00 0.00 2.52
3321 3591 2.222027 CTCACTGGAGTGGTTTTGACC 58.778 52.381 6.94 0.00 45.65 4.02
3322 3592 1.843851 TCACTGGAGTGGTTTTGACCT 59.156 47.619 6.94 0.00 45.65 3.85
3324 3594 1.202651 ACTGGAGTGGTTTTGACCTCG 60.203 52.381 0.00 0.00 0.00 4.63
3325 3595 0.834612 TGGAGTGGTTTTGACCTCGT 59.165 50.000 0.00 0.00 0.00 4.18
3326 3596 1.210967 TGGAGTGGTTTTGACCTCGTT 59.789 47.619 0.00 0.00 0.00 3.85
3327 3597 1.602377 GGAGTGGTTTTGACCTCGTTG 59.398 52.381 0.00 0.00 0.00 4.10
3328 3598 2.557317 GAGTGGTTTTGACCTCGTTGA 58.443 47.619 0.00 0.00 0.00 3.18
3329 3599 2.285977 AGTGGTTTTGACCTCGTTGAC 58.714 47.619 0.00 0.00 0.00 3.18
3330 3600 2.093128 AGTGGTTTTGACCTCGTTGACT 60.093 45.455 0.00 0.00 0.00 3.41
3331 3601 2.031683 GTGGTTTTGACCTCGTTGACTG 59.968 50.000 0.00 0.00 0.00 3.51
3332 3602 1.002792 GGTTTTGACCTCGTTGACTGC 60.003 52.381 0.00 0.00 0.00 4.40
3333 3603 1.940613 GTTTTGACCTCGTTGACTGCT 59.059 47.619 0.00 0.00 0.00 4.24
3334 3604 1.581934 TTTGACCTCGTTGACTGCTG 58.418 50.000 0.00 0.00 0.00 4.41
3335 3605 0.750249 TTGACCTCGTTGACTGCTGA 59.250 50.000 0.00 0.00 0.00 4.26
3336 3606 0.032130 TGACCTCGTTGACTGCTGAC 59.968 55.000 0.00 0.00 0.00 3.51
3337 3607 0.315568 GACCTCGTTGACTGCTGACT 59.684 55.000 0.00 0.00 0.00 3.41
3340 3610 0.668706 CTCGTTGACTGCTGACTGGG 60.669 60.000 0.00 0.00 0.00 4.45
3408 3680 4.524328 ACAGATCATCGAGCATACCATGTA 59.476 41.667 0.00 0.00 0.00 2.29
3596 3871 9.884465 TTAAATAAAATTTTGCCAAACGGATTG 57.116 25.926 13.76 0.00 38.84 2.67
3597 3872 7.736447 AATAAAATTTTGCCAAACGGATTGA 57.264 28.000 13.76 0.00 41.85 2.57
4148 4450 5.481200 ACAGATTGAGCGATTCATCAAAG 57.519 39.130 5.65 3.11 38.80 2.77
4204 4506 5.353394 TCTCGTTTGACCTAATGGCTTAT 57.647 39.130 0.00 0.00 36.63 1.73
4268 4570 0.317854 GCGGTCAAAACCACTTCAGC 60.318 55.000 0.00 0.00 46.86 4.26
4350 4655 8.645814 TGAGGTCAAGTATCTTAGTTGTTAGA 57.354 34.615 2.89 0.00 39.53 2.10
4380 4685 6.084326 TCTGCGATGACTAGCATAAACATA 57.916 37.500 0.00 0.00 42.95 2.29
4383 4688 6.943981 TGCGATGACTAGCATAAACATAAAC 58.056 36.000 0.00 0.00 38.59 2.01
4411 4716 4.546829 ACTGTTAAGCGGAATGGAAGTA 57.453 40.909 0.00 0.00 0.00 2.24
4422 4727 5.527951 CGGAATGGAAGTAGATCTCTGAAG 58.472 45.833 0.00 0.00 0.00 3.02
4684 4995 0.907230 ACTCCTCCCCTCAGTCAAGC 60.907 60.000 0.00 0.00 0.00 4.01
4709 5021 3.433615 GCTAATTGATATGCTCCCACGAC 59.566 47.826 0.00 0.00 0.00 4.34
4806 5118 3.915437 AAACTTACTGTCGGGCAAATG 57.085 42.857 0.00 0.00 0.00 2.32
4888 5202 2.231478 TGCTGTTGTAGTCCTAGAGCAC 59.769 50.000 0.00 0.00 30.26 4.40
4934 5249 9.191995 CAATTTAGTTCAAATTTACCACAGGTC 57.808 33.333 0.00 0.00 42.93 3.85
4942 5257 0.973632 TTACCACAGGTCTGTCGCAT 59.026 50.000 0.00 0.00 42.83 4.73
4943 5258 0.530744 TACCACAGGTCTGTCGCATC 59.469 55.000 0.00 0.00 42.83 3.91
4950 5265 1.064758 AGGTCTGTCGCATCTCTCTCT 60.065 52.381 0.00 0.00 0.00 3.10
4954 5269 2.170397 TCTGTCGCATCTCTCTCTCTCT 59.830 50.000 0.00 0.00 0.00 3.10
4955 5270 2.545526 CTGTCGCATCTCTCTCTCTCTC 59.454 54.545 0.00 0.00 0.00 3.20
4956 5271 2.170397 TGTCGCATCTCTCTCTCTCTCT 59.830 50.000 0.00 0.00 0.00 3.10
4957 5272 2.802816 GTCGCATCTCTCTCTCTCTCTC 59.197 54.545 0.00 0.00 0.00 3.20
4958 5273 2.700371 TCGCATCTCTCTCTCTCTCTCT 59.300 50.000 0.00 0.00 0.00 3.10
4959 5274 3.062763 CGCATCTCTCTCTCTCTCTCTC 58.937 54.545 0.00 0.00 0.00 3.20
4960 5275 3.244009 CGCATCTCTCTCTCTCTCTCTCT 60.244 52.174 0.00 0.00 0.00 3.10
4961 5276 4.314121 GCATCTCTCTCTCTCTCTCTCTC 58.686 52.174 0.00 0.00 0.00 3.20
4962 5277 4.040217 GCATCTCTCTCTCTCTCTCTCTCT 59.960 50.000 0.00 0.00 0.00 3.10
4963 5278 5.782047 CATCTCTCTCTCTCTCTCTCTCTC 58.218 50.000 0.00 0.00 0.00 3.20
4964 5279 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
4965 5280 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
4966 5281 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
4967 5282 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
4968 5283 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
4969 5284 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
4991 5306 1.927487 TTGCTGCTTTCCACCATCAT 58.073 45.000 0.00 0.00 0.00 2.45
4993 5308 0.179119 GCTGCTTTCCACCATCATGC 60.179 55.000 0.00 0.00 0.00 4.06
5014 5329 3.312421 GCAGCAAGTAAAACACACAGAGA 59.688 43.478 0.00 0.00 0.00 3.10
5015 5330 4.553547 GCAGCAAGTAAAACACACAGAGAG 60.554 45.833 0.00 0.00 0.00 3.20
5016 5331 3.561725 AGCAAGTAAAACACACAGAGAGC 59.438 43.478 0.00 0.00 0.00 4.09
5017 5332 3.604772 GCAAGTAAAACACACAGAGAGCG 60.605 47.826 0.00 0.00 0.00 5.03
5018 5333 3.728076 AGTAAAACACACAGAGAGCGA 57.272 42.857 0.00 0.00 0.00 4.93
5019 5334 3.643763 AGTAAAACACACAGAGAGCGAG 58.356 45.455 0.00 0.00 0.00 5.03
5020 5335 1.871080 AAAACACACAGAGAGCGAGG 58.129 50.000 0.00 0.00 0.00 4.63
5021 5336 0.034059 AAACACACAGAGAGCGAGGG 59.966 55.000 0.00 0.00 0.00 4.30
5022 5337 1.115930 AACACACAGAGAGCGAGGGT 61.116 55.000 0.00 0.00 0.00 4.34
5023 5338 0.251209 ACACACAGAGAGCGAGGGTA 60.251 55.000 0.00 0.00 0.00 3.69
5024 5339 0.888619 CACACAGAGAGCGAGGGTAA 59.111 55.000 0.00 0.00 0.00 2.85
5025 5340 1.135257 CACACAGAGAGCGAGGGTAAG 60.135 57.143 0.00 0.00 0.00 2.34
5026 5341 1.178276 CACAGAGAGCGAGGGTAAGT 58.822 55.000 0.00 0.00 0.00 2.24
5027 5342 2.290768 ACACAGAGAGCGAGGGTAAGTA 60.291 50.000 0.00 0.00 0.00 2.24
5028 5343 2.356382 CACAGAGAGCGAGGGTAAGTAG 59.644 54.545 0.00 0.00 0.00 2.57
5029 5344 1.335496 CAGAGAGCGAGGGTAAGTAGC 59.665 57.143 0.00 0.00 0.00 3.58
5030 5345 1.064611 AGAGAGCGAGGGTAAGTAGCA 60.065 52.381 0.00 0.00 0.00 3.49
5031 5346 1.335496 GAGAGCGAGGGTAAGTAGCAG 59.665 57.143 0.00 0.00 0.00 4.24
5032 5347 1.064611 AGAGCGAGGGTAAGTAGCAGA 60.065 52.381 0.00 0.00 0.00 4.26
5033 5348 1.335496 GAGCGAGGGTAAGTAGCAGAG 59.665 57.143 0.00 0.00 0.00 3.35
5034 5349 1.104630 GCGAGGGTAAGTAGCAGAGT 58.895 55.000 0.00 0.00 0.00 3.24
5035 5350 1.477295 GCGAGGGTAAGTAGCAGAGTT 59.523 52.381 0.00 0.00 0.00 3.01
5036 5351 2.479901 GCGAGGGTAAGTAGCAGAGTTC 60.480 54.545 0.00 0.00 0.00 3.01
5037 5352 2.099427 CGAGGGTAAGTAGCAGAGTTCC 59.901 54.545 0.00 0.00 0.00 3.62
5038 5353 3.097614 GAGGGTAAGTAGCAGAGTTCCA 58.902 50.000 0.00 0.00 0.00 3.53
5039 5354 2.832733 AGGGTAAGTAGCAGAGTTCCAC 59.167 50.000 0.00 0.00 0.00 4.02
5040 5355 2.832733 GGGTAAGTAGCAGAGTTCCACT 59.167 50.000 0.00 0.00 0.00 4.00
5041 5356 3.368531 GGGTAAGTAGCAGAGTTCCACTG 60.369 52.174 0.00 0.00 38.27 3.66
5042 5357 3.258622 GGTAAGTAGCAGAGTTCCACTGT 59.741 47.826 0.00 0.00 37.64 3.55
5043 5358 4.262506 GGTAAGTAGCAGAGTTCCACTGTT 60.263 45.833 0.00 0.00 37.64 3.16
5044 5359 3.393089 AGTAGCAGAGTTCCACTGTTG 57.607 47.619 0.00 0.00 37.64 3.33
5045 5360 1.801178 GTAGCAGAGTTCCACTGTTGC 59.199 52.381 0.00 3.03 36.33 4.17
5046 5361 0.536006 AGCAGAGTTCCACTGTTGCC 60.536 55.000 0.00 0.00 36.58 4.52
5047 5362 0.819259 GCAGAGTTCCACTGTTGCCA 60.819 55.000 0.00 0.00 37.64 4.92
5048 5363 1.679139 CAGAGTTCCACTGTTGCCAA 58.321 50.000 0.00 0.00 0.00 4.52
5049 5364 1.334869 CAGAGTTCCACTGTTGCCAAC 59.665 52.381 0.00 0.00 0.00 3.77
5050 5365 0.307760 GAGTTCCACTGTTGCCAACG 59.692 55.000 2.68 0.71 0.00 4.10
5051 5366 1.299089 GTTCCACTGTTGCCAACGC 60.299 57.895 2.68 0.00 0.00 4.84
5052 5367 2.485795 TTCCACTGTTGCCAACGCC 61.486 57.895 2.68 0.00 0.00 5.68
5053 5368 2.902423 TTCCACTGTTGCCAACGCCT 62.902 55.000 2.68 0.00 0.00 5.52
5054 5369 2.332514 CACTGTTGCCAACGCCTG 59.667 61.111 2.68 0.00 0.00 4.85
5055 5370 2.186160 CACTGTTGCCAACGCCTGA 61.186 57.895 2.68 0.00 0.00 3.86
5056 5371 1.453015 ACTGTTGCCAACGCCTGAA 60.453 52.632 2.68 0.00 0.00 3.02
5057 5372 1.008538 CTGTTGCCAACGCCTGAAC 60.009 57.895 2.68 0.00 0.00 3.18
5058 5373 1.447317 CTGTTGCCAACGCCTGAACT 61.447 55.000 2.68 0.00 0.00 3.01
5059 5374 1.008538 GTTGCCAACGCCTGAACTG 60.009 57.895 0.00 0.00 0.00 3.16
5060 5375 2.192861 TTGCCAACGCCTGAACTGG 61.193 57.895 0.00 0.00 0.00 4.00
5061 5376 2.281484 GCCAACGCCTGAACTGGA 60.281 61.111 2.01 0.00 0.00 3.86
5062 5377 2.617274 GCCAACGCCTGAACTGGAC 61.617 63.158 2.01 0.00 0.00 4.02
5063 5378 2.317609 CCAACGCCTGAACTGGACG 61.318 63.158 2.01 7.27 34.52 4.79
5064 5379 2.665185 AACGCCTGAACTGGACGC 60.665 61.111 2.01 0.00 32.67 5.19
5065 5380 3.165160 AACGCCTGAACTGGACGCT 62.165 57.895 2.01 0.00 32.67 5.07
5066 5381 3.114616 CGCCTGAACTGGACGCTG 61.115 66.667 2.01 0.00 0.00 5.18
5067 5382 2.031163 GCCTGAACTGGACGCTGT 59.969 61.111 2.01 0.00 0.00 4.40
5068 5383 1.292223 GCCTGAACTGGACGCTGTA 59.708 57.895 2.01 0.00 0.00 2.74
5069 5384 0.737715 GCCTGAACTGGACGCTGTAG 60.738 60.000 2.01 0.00 0.00 2.74
5070 5385 0.603569 CCTGAACTGGACGCTGTAGT 59.396 55.000 0.00 0.00 0.00 2.73
5071 5386 1.402984 CCTGAACTGGACGCTGTAGTC 60.403 57.143 0.00 0.00 40.25 2.59
5072 5387 1.269723 CTGAACTGGACGCTGTAGTCA 59.730 52.381 7.48 0.00 42.62 3.41
5073 5388 1.000607 TGAACTGGACGCTGTAGTCAC 60.001 52.381 7.48 0.00 42.62 3.67
5074 5389 0.317479 AACTGGACGCTGTAGTCACC 59.683 55.000 7.48 0.00 42.62 4.02
5075 5390 0.539901 ACTGGACGCTGTAGTCACCT 60.540 55.000 7.48 0.00 42.62 4.00
5076 5391 1.271762 ACTGGACGCTGTAGTCACCTA 60.272 52.381 7.48 0.00 42.62 3.08
5077 5392 1.816835 CTGGACGCTGTAGTCACCTAA 59.183 52.381 7.48 0.00 42.62 2.69
5078 5393 2.427453 CTGGACGCTGTAGTCACCTAAT 59.573 50.000 7.48 0.00 42.62 1.73
5079 5394 3.623703 TGGACGCTGTAGTCACCTAATA 58.376 45.455 7.48 0.00 42.62 0.98
5080 5395 4.212716 TGGACGCTGTAGTCACCTAATAT 58.787 43.478 7.48 0.00 42.62 1.28
5081 5396 4.037565 TGGACGCTGTAGTCACCTAATATG 59.962 45.833 7.48 0.00 42.62 1.78
5082 5397 4.037684 GGACGCTGTAGTCACCTAATATGT 59.962 45.833 7.48 0.00 42.62 2.29
5083 5398 4.933330 ACGCTGTAGTCACCTAATATGTG 58.067 43.478 0.00 0.00 35.01 3.21
5084 5399 4.401519 ACGCTGTAGTCACCTAATATGTGT 59.598 41.667 0.00 0.00 35.25 3.72
5085 5400 5.591472 ACGCTGTAGTCACCTAATATGTGTA 59.409 40.000 0.00 0.00 35.25 2.90
5086 5401 6.143496 CGCTGTAGTCACCTAATATGTGTAG 58.857 44.000 0.00 0.00 35.25 2.74
5087 5402 6.448006 GCTGTAGTCACCTAATATGTGTAGG 58.552 44.000 0.00 0.00 43.37 3.18
5088 5403 6.264744 GCTGTAGTCACCTAATATGTGTAGGA 59.735 42.308 6.04 0.00 40.67 2.94
5089 5404 7.522399 GCTGTAGTCACCTAATATGTGTAGGAG 60.522 44.444 6.04 0.00 40.67 3.69
5090 5405 6.776116 TGTAGTCACCTAATATGTGTAGGAGG 59.224 42.308 6.04 0.00 40.67 4.30
5091 5406 4.589374 AGTCACCTAATATGTGTAGGAGGC 59.411 45.833 6.04 0.47 40.67 4.70
5092 5407 4.589374 GTCACCTAATATGTGTAGGAGGCT 59.411 45.833 6.04 0.00 40.67 4.58
5093 5408 5.773680 GTCACCTAATATGTGTAGGAGGCTA 59.226 44.000 6.04 0.00 40.67 3.93
5094 5409 5.773680 TCACCTAATATGTGTAGGAGGCTAC 59.226 44.000 6.04 0.00 40.67 3.58
5095 5410 5.538813 CACCTAATATGTGTAGGAGGCTACA 59.461 44.000 0.00 0.00 40.67 2.74
5096 5411 6.211584 CACCTAATATGTGTAGGAGGCTACAT 59.788 42.308 0.00 1.95 40.67 2.29
5097 5412 6.787957 ACCTAATATGTGTAGGAGGCTACATT 59.212 38.462 0.00 0.00 40.67 2.71
5098 5413 7.099764 CCTAATATGTGTAGGAGGCTACATTG 58.900 42.308 0.00 0.00 40.67 2.82
5099 5414 3.845781 ATGTGTAGGAGGCTACATTGG 57.154 47.619 0.00 0.00 41.21 3.16
5100 5415 2.827755 TGTGTAGGAGGCTACATTGGA 58.172 47.619 0.00 0.00 41.21 3.53
5101 5416 3.384168 TGTGTAGGAGGCTACATTGGAT 58.616 45.455 0.00 0.00 41.21 3.41
5102 5417 3.388024 TGTGTAGGAGGCTACATTGGATC 59.612 47.826 0.00 0.00 41.21 3.36
5103 5418 2.628178 TGTAGGAGGCTACATTGGATCG 59.372 50.000 0.00 0.00 35.18 3.69
5104 5419 1.051812 AGGAGGCTACATTGGATCGG 58.948 55.000 0.00 0.00 0.00 4.18
5105 5420 0.603975 GGAGGCTACATTGGATCGGC 60.604 60.000 0.00 0.00 0.00 5.54
5106 5421 0.394565 GAGGCTACATTGGATCGGCT 59.605 55.000 0.00 0.00 0.00 5.52
5107 5422 0.839946 AGGCTACATTGGATCGGCTT 59.160 50.000 0.00 0.00 0.00 4.35
5108 5423 1.212935 AGGCTACATTGGATCGGCTTT 59.787 47.619 0.00 0.00 0.00 3.51
5109 5424 2.024414 GGCTACATTGGATCGGCTTTT 58.976 47.619 0.00 0.00 0.00 2.27
5110 5425 2.033424 GGCTACATTGGATCGGCTTTTC 59.967 50.000 0.00 0.00 0.00 2.29
5111 5426 2.682856 GCTACATTGGATCGGCTTTTCA 59.317 45.455 0.00 0.00 0.00 2.69
5112 5427 3.242870 GCTACATTGGATCGGCTTTTCAG 60.243 47.826 0.00 0.00 0.00 3.02
5113 5428 3.071874 ACATTGGATCGGCTTTTCAGA 57.928 42.857 0.00 0.00 0.00 3.27
5114 5429 3.624777 ACATTGGATCGGCTTTTCAGAT 58.375 40.909 0.00 0.00 32.20 2.90
5115 5430 4.780815 ACATTGGATCGGCTTTTCAGATA 58.219 39.130 0.00 0.00 29.62 1.98
5116 5431 4.818546 ACATTGGATCGGCTTTTCAGATAG 59.181 41.667 0.00 0.00 29.62 2.08
5117 5432 3.475566 TGGATCGGCTTTTCAGATAGG 57.524 47.619 0.00 0.00 29.62 2.57
5118 5433 2.147150 GGATCGGCTTTTCAGATAGGC 58.853 52.381 0.00 0.00 29.62 3.93
5119 5434 2.147150 GATCGGCTTTTCAGATAGGCC 58.853 52.381 4.12 4.12 39.43 5.19
5120 5435 1.204146 TCGGCTTTTCAGATAGGCCT 58.796 50.000 11.78 11.78 40.52 5.19
5121 5436 1.559682 TCGGCTTTTCAGATAGGCCTT 59.440 47.619 12.58 0.00 40.52 4.35
5122 5437 1.672881 CGGCTTTTCAGATAGGCCTTG 59.327 52.381 12.58 2.75 40.52 3.61
5123 5438 2.680805 CGGCTTTTCAGATAGGCCTTGA 60.681 50.000 12.58 5.92 40.52 3.02
5124 5439 2.948315 GGCTTTTCAGATAGGCCTTGAG 59.052 50.000 12.58 0.00 39.68 3.02
5125 5440 3.370953 GGCTTTTCAGATAGGCCTTGAGA 60.371 47.826 12.58 0.22 39.68 3.27
5126 5441 3.876320 GCTTTTCAGATAGGCCTTGAGAG 59.124 47.826 12.58 11.71 0.00 3.20
5127 5442 4.450053 CTTTTCAGATAGGCCTTGAGAGG 58.550 47.826 12.58 0.17 46.50 3.69
5140 5455 2.770164 TGAGAGGCAAGGAAAGTAGC 57.230 50.000 0.00 0.00 0.00 3.58
5141 5456 2.260822 TGAGAGGCAAGGAAAGTAGCT 58.739 47.619 0.00 0.00 0.00 3.32
5142 5457 2.639839 TGAGAGGCAAGGAAAGTAGCTT 59.360 45.455 0.00 0.00 0.00 3.74
5143 5458 3.838317 TGAGAGGCAAGGAAAGTAGCTTA 59.162 43.478 0.00 0.00 0.00 3.09
5144 5459 4.286032 TGAGAGGCAAGGAAAGTAGCTTAA 59.714 41.667 0.00 0.00 0.00 1.85
5145 5460 4.580868 AGAGGCAAGGAAAGTAGCTTAAC 58.419 43.478 0.00 0.00 0.00 2.01
5146 5461 3.687125 AGGCAAGGAAAGTAGCTTAACC 58.313 45.455 0.00 0.00 0.00 2.85
5147 5462 3.073946 AGGCAAGGAAAGTAGCTTAACCA 59.926 43.478 0.00 0.00 0.00 3.67
5148 5463 3.190744 GGCAAGGAAAGTAGCTTAACCAC 59.809 47.826 0.00 0.00 0.00 4.16
5149 5464 3.190744 GCAAGGAAAGTAGCTTAACCACC 59.809 47.826 0.00 0.00 0.00 4.61
5150 5465 4.394729 CAAGGAAAGTAGCTTAACCACCA 58.605 43.478 0.00 0.00 0.00 4.17
5151 5466 4.929146 AGGAAAGTAGCTTAACCACCAT 57.071 40.909 0.00 0.00 0.00 3.55
5152 5467 4.844884 AGGAAAGTAGCTTAACCACCATC 58.155 43.478 0.00 0.00 0.00 3.51
5153 5468 4.288626 AGGAAAGTAGCTTAACCACCATCA 59.711 41.667 0.00 0.00 0.00 3.07
5154 5469 5.044846 AGGAAAGTAGCTTAACCACCATCAT 60.045 40.000 0.00 0.00 0.00 2.45
5155 5470 5.066505 GGAAAGTAGCTTAACCACCATCATG 59.933 44.000 0.00 0.00 0.00 3.07
5156 5471 3.545703 AGTAGCTTAACCACCATCATGC 58.454 45.455 0.00 0.00 0.00 4.06
5157 5472 2.512692 AGCTTAACCACCATCATGCA 57.487 45.000 0.00 0.00 0.00 3.96
5158 5473 2.372264 AGCTTAACCACCATCATGCAG 58.628 47.619 0.00 0.00 0.00 4.41
5159 5474 1.202336 GCTTAACCACCATCATGCAGC 60.202 52.381 0.00 0.00 0.00 5.25
5160 5475 2.093890 CTTAACCACCATCATGCAGCA 58.906 47.619 0.00 0.00 0.00 4.41
5161 5476 2.212812 TAACCACCATCATGCAGCAA 57.787 45.000 0.00 0.00 0.00 3.91
5162 5477 0.892755 AACCACCATCATGCAGCAAG 59.107 50.000 0.00 0.00 0.00 4.01
5163 5478 0.251474 ACCACCATCATGCAGCAAGT 60.251 50.000 0.00 0.00 0.00 3.16
5164 5479 1.004628 ACCACCATCATGCAGCAAGTA 59.995 47.619 0.00 0.00 0.00 2.24
5165 5480 2.093890 CCACCATCATGCAGCAAGTAA 58.906 47.619 0.00 0.00 0.00 2.24
5166 5481 2.492881 CCACCATCATGCAGCAAGTAAA 59.507 45.455 0.00 0.00 0.00 2.01
5167 5482 3.056678 CCACCATCATGCAGCAAGTAAAA 60.057 43.478 0.00 0.00 0.00 1.52
5168 5483 3.922240 CACCATCATGCAGCAAGTAAAAC 59.078 43.478 0.00 0.00 0.00 2.43
5169 5484 3.573538 ACCATCATGCAGCAAGTAAAACA 59.426 39.130 0.00 0.00 0.00 2.83
5170 5485 3.922240 CCATCATGCAGCAAGTAAAACAC 59.078 43.478 0.00 0.00 0.00 3.32
5171 5486 4.548494 CATCATGCAGCAAGTAAAACACA 58.452 39.130 0.00 0.00 0.00 3.72
5172 5487 3.963665 TCATGCAGCAAGTAAAACACAC 58.036 40.909 0.00 0.00 0.00 3.82
5173 5488 3.379688 TCATGCAGCAAGTAAAACACACA 59.620 39.130 0.00 0.00 0.00 3.72
5174 5489 3.419264 TGCAGCAAGTAAAACACACAG 57.581 42.857 0.00 0.00 0.00 3.66
5175 5490 3.013219 TGCAGCAAGTAAAACACACAGA 58.987 40.909 0.00 0.00 0.00 3.41
5176 5491 3.065233 TGCAGCAAGTAAAACACACAGAG 59.935 43.478 0.00 0.00 0.00 3.35
5177 5492 3.621794 CAGCAAGTAAAACACACAGAGC 58.378 45.455 0.00 0.00 0.00 4.09
5178 5493 2.287915 AGCAAGTAAAACACACAGAGCG 59.712 45.455 0.00 0.00 0.00 5.03
5179 5494 2.639751 CAAGTAAAACACACAGAGCGC 58.360 47.619 0.00 0.00 0.00 5.92
5180 5495 0.859232 AGTAAAACACACAGAGCGCG 59.141 50.000 0.00 0.00 0.00 6.86
5181 5496 0.856641 GTAAAACACACAGAGCGCGA 59.143 50.000 12.10 0.00 0.00 5.87
5182 5497 1.136611 GTAAAACACACAGAGCGCGAG 60.137 52.381 12.10 0.00 0.00 5.03
5183 5498 1.498865 AAAACACACAGAGCGCGAGG 61.499 55.000 12.10 0.00 0.00 4.63
5199 5514 1.135333 CGAGGGGAAGTAGCAGAGTTC 59.865 57.143 0.00 0.00 36.84 3.01
5303 5618 2.770164 TGAGAGGCAAGGAAAGTAGC 57.230 50.000 0.00 0.00 0.00 3.58
5304 5619 2.260822 TGAGAGGCAAGGAAAGTAGCT 58.739 47.619 0.00 0.00 0.00 3.32
5305 5620 2.639839 TGAGAGGCAAGGAAAGTAGCTT 59.360 45.455 0.00 0.00 0.00 3.74
5306 5621 3.838317 TGAGAGGCAAGGAAAGTAGCTTA 59.162 43.478 0.00 0.00 0.00 3.09
5308 5623 4.580868 AGAGGCAAGGAAAGTAGCTTAAC 58.419 43.478 0.00 0.00 0.00 2.01
5309 5624 3.687125 AGGCAAGGAAAGTAGCTTAACC 58.313 45.455 0.00 0.00 0.00 2.85
5310 5625 3.073946 AGGCAAGGAAAGTAGCTTAACCA 59.926 43.478 0.00 0.00 0.00 3.67
5311 5626 3.190744 GGCAAGGAAAGTAGCTTAACCAC 59.809 47.826 0.00 0.00 0.00 4.16
5312 5627 3.190744 GCAAGGAAAGTAGCTTAACCACC 59.809 47.826 0.00 0.00 0.00 4.61
5313 5628 4.394729 CAAGGAAAGTAGCTTAACCACCA 58.605 43.478 0.00 0.00 0.00 4.17
5314 5629 4.929146 AGGAAAGTAGCTTAACCACCAT 57.071 40.909 0.00 0.00 0.00 3.55
5315 5630 4.844884 AGGAAAGTAGCTTAACCACCATC 58.155 43.478 0.00 0.00 0.00 3.51
5316 5631 4.288626 AGGAAAGTAGCTTAACCACCATCA 59.711 41.667 0.00 0.00 0.00 3.07
5317 5632 5.044846 AGGAAAGTAGCTTAACCACCATCAT 60.045 40.000 0.00 0.00 0.00 2.45
5318 5633 5.066505 GGAAAGTAGCTTAACCACCATCATG 59.933 44.000 0.00 0.00 0.00 3.07
5319 5634 3.545703 AGTAGCTTAACCACCATCATGC 58.454 45.455 0.00 0.00 0.00 4.06
5320 5635 2.512692 AGCTTAACCACCATCATGCA 57.487 45.000 0.00 0.00 0.00 3.96
5321 5636 2.372264 AGCTTAACCACCATCATGCAG 58.628 47.619 0.00 0.00 0.00 4.41
5322 5637 1.202336 GCTTAACCACCATCATGCAGC 60.202 52.381 0.00 0.00 0.00 5.25
5323 5638 2.093890 CTTAACCACCATCATGCAGCA 58.906 47.619 0.00 0.00 0.00 4.41
5324 5639 2.212812 TAACCACCATCATGCAGCAA 57.787 45.000 0.00 0.00 0.00 3.91
5325 5640 0.892755 AACCACCATCATGCAGCAAG 59.107 50.000 0.00 0.00 0.00 4.01
5326 5641 0.968901 ACCACCATCATGCAGCAAGG 60.969 55.000 0.00 1.81 0.00 3.61
5327 5642 0.681887 CCACCATCATGCAGCAAGGA 60.682 55.000 0.00 0.00 0.00 3.36
5328 5643 1.179152 CACCATCATGCAGCAAGGAA 58.821 50.000 0.00 0.00 0.00 3.36
5329 5644 1.546923 CACCATCATGCAGCAAGGAAA 59.453 47.619 0.00 0.00 0.00 3.13
5330 5645 2.028839 CACCATCATGCAGCAAGGAAAA 60.029 45.455 0.00 0.00 0.00 2.29
5331 5646 2.028748 ACCATCATGCAGCAAGGAAAAC 60.029 45.455 0.00 0.00 0.00 2.43
5332 5647 2.028839 CCATCATGCAGCAAGGAAAACA 60.029 45.455 0.00 0.00 0.00 2.83
5333 5648 2.798976 TCATGCAGCAAGGAAAACAC 57.201 45.000 0.00 0.00 0.00 3.32
5334 5649 2.030371 TCATGCAGCAAGGAAAACACA 58.970 42.857 0.00 0.00 0.00 3.72
5335 5650 2.629137 TCATGCAGCAAGGAAAACACAT 59.371 40.909 0.00 0.00 0.00 3.21
5336 5651 3.825585 TCATGCAGCAAGGAAAACACATA 59.174 39.130 0.00 0.00 0.00 2.29
5337 5652 3.921119 TGCAGCAAGGAAAACACATAG 57.079 42.857 0.00 0.00 0.00 2.23
5338 5653 3.485394 TGCAGCAAGGAAAACACATAGA 58.515 40.909 0.00 0.00 0.00 1.98
5339 5654 3.503363 TGCAGCAAGGAAAACACATAGAG 59.497 43.478 0.00 0.00 0.00 2.43
5340 5655 3.671702 GCAGCAAGGAAAACACATAGAGC 60.672 47.826 0.00 0.00 0.00 4.09
5341 5656 2.744202 AGCAAGGAAAACACATAGAGCG 59.256 45.455 0.00 0.00 0.00 5.03
5342 5657 2.729156 GCAAGGAAAACACATAGAGCGC 60.729 50.000 0.00 0.00 0.00 5.92
5343 5658 1.359848 AGGAAAACACATAGAGCGCG 58.640 50.000 0.00 0.00 0.00 6.86
5344 5659 1.067142 AGGAAAACACATAGAGCGCGA 60.067 47.619 12.10 0.00 0.00 5.87
5345 5660 1.324736 GGAAAACACATAGAGCGCGAG 59.675 52.381 12.10 0.00 0.00 5.03
5346 5661 1.324736 GAAAACACATAGAGCGCGAGG 59.675 52.381 12.10 0.00 0.00 4.63
5347 5662 0.460284 AAACACATAGAGCGCGAGGG 60.460 55.000 12.10 0.00 0.00 4.30
5348 5663 2.028190 CACATAGAGCGCGAGGGG 59.972 66.667 12.10 0.00 0.00 4.79
5349 5664 2.123854 ACATAGAGCGCGAGGGGA 60.124 61.111 12.10 0.00 0.00 4.81
5350 5665 1.756950 ACATAGAGCGCGAGGGGAA 60.757 57.895 12.10 0.00 0.00 3.97
5351 5666 1.006805 CATAGAGCGCGAGGGGAAG 60.007 63.158 12.10 0.00 0.00 3.46
5352 5667 1.455959 ATAGAGCGCGAGGGGAAGT 60.456 57.895 12.10 0.00 0.00 3.01
5353 5668 0.178998 ATAGAGCGCGAGGGGAAGTA 60.179 55.000 12.10 0.00 0.00 2.24
5354 5669 0.818445 TAGAGCGCGAGGGGAAGTAG 60.818 60.000 12.10 0.00 0.00 2.57
5355 5670 3.776659 GAGCGCGAGGGGAAGTAGC 62.777 68.421 12.10 0.00 0.00 3.58
5356 5671 4.143333 GCGCGAGGGGAAGTAGCA 62.143 66.667 12.10 0.00 0.00 3.49
5357 5672 2.105128 CGCGAGGGGAAGTAGCAG 59.895 66.667 0.00 0.00 0.00 4.24
5358 5673 2.415608 CGCGAGGGGAAGTAGCAGA 61.416 63.158 0.00 0.00 0.00 4.26
5359 5674 1.439644 GCGAGGGGAAGTAGCAGAG 59.560 63.158 0.00 0.00 0.00 3.35
5360 5675 1.324005 GCGAGGGGAAGTAGCAGAGT 61.324 60.000 0.00 0.00 0.00 3.24
5361 5676 1.187087 CGAGGGGAAGTAGCAGAGTT 58.813 55.000 0.00 0.00 0.00 3.01
5362 5677 1.135333 CGAGGGGAAGTAGCAGAGTTC 59.865 57.143 0.00 0.00 36.84 3.01
5368 5683 3.669251 GAAGTAGCAGAGTTCCACTGT 57.331 47.619 0.00 0.00 37.64 3.55
5369 5684 3.996480 GAAGTAGCAGAGTTCCACTGTT 58.004 45.455 0.00 0.00 37.64 3.16
5370 5685 3.393089 AGTAGCAGAGTTCCACTGTTG 57.607 47.619 0.00 0.00 37.64 3.33
5371 5686 2.700897 AGTAGCAGAGTTCCACTGTTGT 59.299 45.455 0.00 0.00 37.64 3.32
5372 5687 2.246719 AGCAGAGTTCCACTGTTGTC 57.753 50.000 0.00 0.00 37.64 3.18
5373 5688 1.486310 AGCAGAGTTCCACTGTTGTCA 59.514 47.619 0.00 0.00 37.64 3.58
5374 5689 2.092968 AGCAGAGTTCCACTGTTGTCAA 60.093 45.455 0.00 0.00 37.64 3.18
5375 5690 2.032178 GCAGAGTTCCACTGTTGTCAAC 59.968 50.000 8.86 8.86 37.64 3.18
5376 5691 2.285220 CAGAGTTCCACTGTTGTCAACG 59.715 50.000 11.03 8.30 0.00 4.10
5377 5692 1.003866 GAGTTCCACTGTTGTCAACGC 60.004 52.381 11.03 0.00 0.00 4.84
5378 5693 0.028902 GTTCCACTGTTGTCAACGCC 59.971 55.000 11.03 0.00 0.00 5.68
5379 5694 0.107410 TTCCACTGTTGTCAACGCCT 60.107 50.000 11.03 0.00 0.00 5.52
5380 5695 0.813610 TCCACTGTTGTCAACGCCTG 60.814 55.000 11.03 5.82 0.00 4.85
5381 5696 0.813610 CCACTGTTGTCAACGCCTGA 60.814 55.000 11.03 0.00 0.00 3.86
5382 5697 1.013596 CACTGTTGTCAACGCCTGAA 58.986 50.000 11.03 0.00 35.22 3.02
5383 5698 1.014352 ACTGTTGTCAACGCCTGAAC 58.986 50.000 11.03 0.00 35.22 3.18
5384 5699 1.299541 CTGTTGTCAACGCCTGAACT 58.700 50.000 11.03 0.00 35.22 3.01
5385 5700 1.003545 CTGTTGTCAACGCCTGAACTG 60.004 52.381 11.03 0.00 35.22 3.16
5386 5701 0.307760 GTTGTCAACGCCTGAACTGG 59.692 55.000 0.00 0.00 35.22 4.00
5387 5702 0.179234 TTGTCAACGCCTGAACTGGA 59.821 50.000 2.01 0.00 35.22 3.86
5388 5703 0.531974 TGTCAACGCCTGAACTGGAC 60.532 55.000 2.01 0.00 35.22 4.02
5389 5704 0.531974 GTCAACGCCTGAACTGGACA 60.532 55.000 2.01 0.00 35.22 4.02
5390 5705 0.531974 TCAACGCCTGAACTGGACAC 60.532 55.000 2.01 0.00 0.00 3.67
5391 5706 0.532862 CAACGCCTGAACTGGACACT 60.533 55.000 2.01 0.00 0.00 3.55
5392 5707 0.532862 AACGCCTGAACTGGACACTG 60.533 55.000 2.01 0.00 0.00 3.66
5393 5708 1.069765 CGCCTGAACTGGACACTGT 59.930 57.895 2.01 0.00 0.00 3.55
5394 5709 0.317160 CGCCTGAACTGGACACTGTA 59.683 55.000 2.01 0.00 0.00 2.74
5395 5710 1.670087 CGCCTGAACTGGACACTGTAG 60.670 57.143 2.01 0.00 0.00 2.74
5396 5711 1.344763 GCCTGAACTGGACACTGTAGT 59.655 52.381 2.01 0.00 0.00 2.73
5397 5712 2.610727 GCCTGAACTGGACACTGTAGTC 60.611 54.545 2.01 0.00 37.80 2.59
5398 5713 2.628178 CCTGAACTGGACACTGTAGTCA 59.372 50.000 10.85 0.00 40.29 3.41
5399 5714 3.553096 CCTGAACTGGACACTGTAGTCAC 60.553 52.174 10.85 3.79 40.29 3.67
5400 5715 2.364324 TGAACTGGACACTGTAGTCACC 59.636 50.000 10.85 0.00 40.29 4.02
5401 5716 2.383442 ACTGGACACTGTAGTCACCT 57.617 50.000 10.85 0.00 40.29 4.00
5402 5717 3.520691 ACTGGACACTGTAGTCACCTA 57.479 47.619 10.85 0.00 40.29 3.08
5403 5718 3.840991 ACTGGACACTGTAGTCACCTAA 58.159 45.455 10.85 0.00 40.29 2.69
5404 5719 4.417437 ACTGGACACTGTAGTCACCTAAT 58.583 43.478 10.85 0.00 40.29 1.73
5405 5720 5.577100 ACTGGACACTGTAGTCACCTAATA 58.423 41.667 10.85 0.00 40.29 0.98
5406 5721 6.195700 ACTGGACACTGTAGTCACCTAATAT 58.804 40.000 10.85 0.00 40.29 1.28
5407 5722 6.096987 ACTGGACACTGTAGTCACCTAATATG 59.903 42.308 10.85 0.00 40.29 1.78
5408 5723 5.955959 TGGACACTGTAGTCACCTAATATGT 59.044 40.000 10.85 0.00 40.29 2.29
5409 5724 6.127451 TGGACACTGTAGTCACCTAATATGTG 60.127 42.308 10.85 0.00 40.29 3.21
5410 5725 6.127423 GGACACTGTAGTCACCTAATATGTGT 60.127 42.308 10.85 0.00 40.29 3.72
5411 5726 7.067859 GGACACTGTAGTCACCTAATATGTGTA 59.932 40.741 10.85 0.00 40.29 2.90
5412 5727 7.997482 ACACTGTAGTCACCTAATATGTGTAG 58.003 38.462 0.00 0.00 33.90 2.74
5413 5728 7.068348 ACACTGTAGTCACCTAATATGTGTAGG 59.932 40.741 0.00 0.00 43.37 3.18
5414 5729 7.284716 CACTGTAGTCACCTAATATGTGTAGGA 59.715 40.741 6.04 0.00 40.67 2.94
5415 5730 7.502895 ACTGTAGTCACCTAATATGTGTAGGAG 59.497 40.741 6.04 0.00 40.67 3.69
5416 5731 6.776116 TGTAGTCACCTAATATGTGTAGGAGG 59.224 42.308 6.04 0.00 40.67 4.30
5417 5732 4.589374 AGTCACCTAATATGTGTAGGAGGC 59.411 45.833 6.04 0.47 40.67 4.70
5418 5733 4.589374 GTCACCTAATATGTGTAGGAGGCT 59.411 45.833 6.04 0.00 40.67 4.58
5419 5734 5.773680 GTCACCTAATATGTGTAGGAGGCTA 59.226 44.000 6.04 0.00 40.67 3.93
5420 5735 5.773680 TCACCTAATATGTGTAGGAGGCTAC 59.226 44.000 6.04 0.00 40.67 3.58
5421 5736 5.538813 CACCTAATATGTGTAGGAGGCTACA 59.461 44.000 0.00 0.00 40.67 2.74
5422 5737 6.211584 CACCTAATATGTGTAGGAGGCTACAT 59.788 42.308 0.00 1.95 40.67 2.29
5423 5738 6.787957 ACCTAATATGTGTAGGAGGCTACATT 59.212 38.462 0.00 0.00 40.67 2.71
5424 5739 7.099764 CCTAATATGTGTAGGAGGCTACATTG 58.900 42.308 0.00 0.00 40.67 2.82
5425 5740 3.845781 ATGTGTAGGAGGCTACATTGG 57.154 47.619 0.00 0.00 41.21 3.16
5426 5741 2.827755 TGTGTAGGAGGCTACATTGGA 58.172 47.619 0.00 0.00 41.21 3.53
5427 5742 3.384168 TGTGTAGGAGGCTACATTGGAT 58.616 45.455 0.00 0.00 41.21 3.41
5428 5743 3.388024 TGTGTAGGAGGCTACATTGGATC 59.612 47.826 0.00 0.00 41.21 3.36
5429 5744 2.628178 TGTAGGAGGCTACATTGGATCG 59.372 50.000 0.00 0.00 35.18 3.69
5430 5745 1.051812 AGGAGGCTACATTGGATCGG 58.948 55.000 0.00 0.00 0.00 4.18
5431 5746 0.603975 GGAGGCTACATTGGATCGGC 60.604 60.000 0.00 0.00 0.00 5.54
5432 5747 0.394565 GAGGCTACATTGGATCGGCT 59.605 55.000 0.00 0.00 0.00 5.52
5433 5748 0.839946 AGGCTACATTGGATCGGCTT 59.160 50.000 0.00 0.00 0.00 4.35
5434 5749 1.212935 AGGCTACATTGGATCGGCTTT 59.787 47.619 0.00 0.00 0.00 3.51
5435 5750 2.024414 GGCTACATTGGATCGGCTTTT 58.976 47.619 0.00 0.00 0.00 2.27
5436 5751 2.033424 GGCTACATTGGATCGGCTTTTC 59.967 50.000 0.00 0.00 0.00 2.29
5437 5752 2.682856 GCTACATTGGATCGGCTTTTCA 59.317 45.455 0.00 0.00 0.00 2.69
5438 5753 3.242870 GCTACATTGGATCGGCTTTTCAG 60.243 47.826 0.00 0.00 0.00 3.02
5439 5754 3.071874 ACATTGGATCGGCTTTTCAGA 57.928 42.857 0.00 0.00 0.00 3.27
5440 5755 3.624777 ACATTGGATCGGCTTTTCAGAT 58.375 40.909 0.00 0.00 32.20 2.90
5441 5756 4.780815 ACATTGGATCGGCTTTTCAGATA 58.219 39.130 0.00 0.00 29.62 1.98
5442 5757 4.818546 ACATTGGATCGGCTTTTCAGATAG 59.181 41.667 0.00 0.00 29.62 2.08
5443 5758 3.475566 TGGATCGGCTTTTCAGATAGG 57.524 47.619 0.00 0.00 29.62 2.57
5444 5759 2.147150 GGATCGGCTTTTCAGATAGGC 58.853 52.381 0.00 0.00 29.62 3.93
5445 5760 2.147150 GATCGGCTTTTCAGATAGGCC 58.853 52.381 4.12 4.12 39.43 5.19
5472 5787 3.687125 AGGCAAGGAAAGTAGCTTAACC 58.313 45.455 0.00 0.00 0.00 2.85
5502 5817 7.466746 ACATCTCTATCTCTAATGCCTCTTC 57.533 40.000 0.00 0.00 0.00 2.87
5506 5821 6.714810 TCTCTATCTCTAATGCCTCTTCAGAC 59.285 42.308 0.00 0.00 0.00 3.51
5519 5834 5.650283 CCTCTTCAGACCCTCCTAGATAAT 58.350 45.833 0.00 0.00 0.00 1.28
5591 5906 5.659079 ACAACCAAGGAAAACAATGAGGTTA 59.341 36.000 0.00 0.00 36.43 2.85
5599 5914 6.267471 AGGAAAACAATGAGGTTAAGATTGCA 59.733 34.615 0.00 0.00 31.45 4.08
5600 5915 6.928492 GGAAAACAATGAGGTTAAGATTGCAA 59.072 34.615 0.00 0.00 31.45 4.08
5626 5941 8.806429 TTGAATGCTTCAATCTAGTAAATCCA 57.194 30.769 7.09 0.00 44.21 3.41
5627 5942 8.985315 TGAATGCTTCAATCTAGTAAATCCAT 57.015 30.769 0.00 0.00 36.59 3.41
5628 5943 9.060347 TGAATGCTTCAATCTAGTAAATCCATC 57.940 33.333 0.00 0.00 36.59 3.51
5629 5944 8.985315 AATGCTTCAATCTAGTAAATCCATCA 57.015 30.769 0.00 0.00 0.00 3.07
5630 5945 8.985315 ATGCTTCAATCTAGTAAATCCATCAA 57.015 30.769 0.00 0.00 0.00 2.57
5631 5946 8.213518 TGCTTCAATCTAGTAAATCCATCAAC 57.786 34.615 0.00 0.00 0.00 3.18
5632 5947 7.828717 TGCTTCAATCTAGTAAATCCATCAACA 59.171 33.333 0.00 0.00 0.00 3.33
5633 5948 8.677300 GCTTCAATCTAGTAAATCCATCAACAA 58.323 33.333 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 6.542821 TGGAGAATTCATGGTCAAGTTTAGT 58.457 36.000 8.44 0.00 0.00 2.24
44 45 2.444766 GAGGGGATGGAGAATTCATGGT 59.555 50.000 8.44 0.00 31.38 3.55
67 68 2.890945 GGGCCAATAGAGAGAGAGAGAC 59.109 54.545 4.39 0.00 0.00 3.36
181 206 1.332195 GCCTCCAAGCCTCTTGTTTT 58.668 50.000 5.92 0.00 0.00 2.43
258 283 8.164733 AGGAAGGAGACGAGTATCTATTTATGA 58.835 37.037 0.00 0.00 0.00 2.15
456 481 1.830477 GAGTGAGTGAGCAAGAGGGAT 59.170 52.381 0.00 0.00 0.00 3.85
605 636 1.522569 GGAACCGAGGTGGGATCTG 59.477 63.158 0.00 0.00 44.64 2.90
640 673 5.100751 AGAAACAAGTCAAATTCGAGCTG 57.899 39.130 0.00 0.00 0.00 4.24
748 784 0.461961 ATCGAAGCCCGGAGAAGAAG 59.538 55.000 0.73 0.00 39.14 2.85
893 939 1.272985 ACCCAGTGGAAGAGAGAGAGG 60.273 57.143 11.95 0.00 34.81 3.69
900 946 0.838122 ACCCAGACCCAGTGGAAGAG 60.838 60.000 11.95 0.00 37.23 2.85
1181 1227 2.382770 ATAAGGGGCATGGCGTCCA 61.383 57.895 13.76 1.01 38.19 4.02
1610 1656 4.828296 CATCCAGCACAGGCCCCC 62.828 72.222 0.00 0.00 42.56 5.40
1614 1660 2.412605 GGAATCATCCAGCACAGGC 58.587 57.895 0.00 0.00 45.79 4.85
1752 1798 9.497030 CGTACTTAATTGCATGCTTTACAATAA 57.503 29.630 20.33 1.92 33.01 1.40
1754 1800 6.472163 GCGTACTTAATTGCATGCTTTACAAT 59.528 34.615 20.33 6.82 35.59 2.71
1755 1801 5.797934 GCGTACTTAATTGCATGCTTTACAA 59.202 36.000 20.33 4.37 0.00 2.41
1757 1803 5.569413 AGCGTACTTAATTGCATGCTTTAC 58.431 37.500 20.33 6.84 28.99 2.01
1758 1804 5.811399 AGCGTACTTAATTGCATGCTTTA 57.189 34.783 20.33 13.64 28.99 1.85
1759 1805 4.701956 AGCGTACTTAATTGCATGCTTT 57.298 36.364 20.33 14.65 28.99 3.51
1777 1824 4.606961 ACCAACTGACAATTAACAAAGCG 58.393 39.130 0.00 0.00 0.00 4.68
1868 1915 5.303333 CACCCAACCAAATTAAGGTGTAAGT 59.697 40.000 3.47 0.00 39.86 2.24
1933 2005 2.551721 CCACAGGAACATGAACAGCTCT 60.552 50.000 0.00 0.00 0.00 4.09
1934 2006 1.808945 CCACAGGAACATGAACAGCTC 59.191 52.381 0.00 0.00 0.00 4.09
1935 2007 1.546323 CCCACAGGAACATGAACAGCT 60.546 52.381 0.00 0.00 33.47 4.24
1936 2008 0.883833 CCCACAGGAACATGAACAGC 59.116 55.000 0.00 0.00 33.47 4.40
1937 2009 0.883833 GCCCACAGGAACATGAACAG 59.116 55.000 0.00 0.00 33.47 3.16
1938 2010 0.478072 AGCCCACAGGAACATGAACA 59.522 50.000 0.00 0.00 33.47 3.18
1939 2011 1.168714 GAGCCCACAGGAACATGAAC 58.831 55.000 0.00 0.00 33.47 3.18
1940 2012 0.038166 GGAGCCCACAGGAACATGAA 59.962 55.000 0.00 0.00 33.47 2.57
1941 2013 0.842030 AGGAGCCCACAGGAACATGA 60.842 55.000 0.00 0.00 33.47 3.07
1942 2014 0.679002 CAGGAGCCCACAGGAACATG 60.679 60.000 0.00 0.00 33.47 3.21
1943 2015 1.136329 ACAGGAGCCCACAGGAACAT 61.136 55.000 0.00 0.00 33.47 2.71
1944 2016 1.768684 GACAGGAGCCCACAGGAACA 61.769 60.000 0.00 0.00 33.47 3.18
1945 2017 1.003233 GACAGGAGCCCACAGGAAC 60.003 63.158 0.00 0.00 33.47 3.62
1946 2018 0.768221 AAGACAGGAGCCCACAGGAA 60.768 55.000 0.00 0.00 33.47 3.36
1947 2019 1.152030 AAGACAGGAGCCCACAGGA 60.152 57.895 0.00 0.00 33.47 3.86
1948 2020 1.197430 AGAAGACAGGAGCCCACAGG 61.197 60.000 0.00 0.00 0.00 4.00
1949 2021 0.689623 AAGAAGACAGGAGCCCACAG 59.310 55.000 0.00 0.00 0.00 3.66
1950 2022 1.140312 AAAGAAGACAGGAGCCCACA 58.860 50.000 0.00 0.00 0.00 4.17
1951 2023 2.278332 AAAAGAAGACAGGAGCCCAC 57.722 50.000 0.00 0.00 0.00 4.61
1986 2058 8.555166 TTCATTGTCAAACGAAACAGAAATAC 57.445 30.769 0.00 0.00 0.00 1.89
2008 2080 6.547141 ACAAACATGAAAGTCTCAGGATTTCA 59.453 34.615 0.00 7.42 44.47 2.69
2128 2200 9.552114 CAGTTTATGCTTAAAATCAGACAGAAG 57.448 33.333 6.38 0.00 0.00 2.85
2187 2259 7.760607 AGGTATGAATCATCTCCACTACTCTA 58.239 38.462 15.83 0.00 0.00 2.43
2188 2260 6.619464 AGGTATGAATCATCTCCACTACTCT 58.381 40.000 15.83 0.24 0.00 3.24
2189 2261 6.719370 AGAGGTATGAATCATCTCCACTACTC 59.281 42.308 15.83 6.26 0.00 2.59
2190 2262 6.619464 AGAGGTATGAATCATCTCCACTACT 58.381 40.000 15.83 8.92 0.00 2.57
2191 2263 6.719370 AGAGAGGTATGAATCATCTCCACTAC 59.281 42.308 15.83 10.45 41.66 2.73
2237 2309 9.396022 AGAGAACTTGAAGATACACAAAAAGAA 57.604 29.630 0.00 0.00 0.00 2.52
2238 2310 8.964476 AGAGAACTTGAAGATACACAAAAAGA 57.036 30.769 0.00 0.00 0.00 2.52
2242 2314 9.645059 CAGATAGAGAACTTGAAGATACACAAA 57.355 33.333 0.00 0.00 0.00 2.83
2243 2315 9.025041 TCAGATAGAGAACTTGAAGATACACAA 57.975 33.333 0.00 0.00 0.00 3.33
2244 2316 8.581253 TCAGATAGAGAACTTGAAGATACACA 57.419 34.615 0.00 0.00 0.00 3.72
2327 2400 0.249073 CGCCATCCTCCAAGACTACG 60.249 60.000 0.00 0.00 0.00 3.51
2339 2412 2.440065 TCCCATTGCACGCCATCC 60.440 61.111 0.00 0.00 0.00 3.51
2495 2568 0.249405 AAACACTGCATTGTTGGGCG 60.249 50.000 21.48 0.00 39.70 6.13
2579 2652 7.812191 GTCAAGCAGTATAATACTCCTCATCAG 59.188 40.741 0.00 0.00 36.76 2.90
2602 2675 2.547634 CACATGAATGAACACACCGTCA 59.452 45.455 0.00 0.00 0.00 4.35
2606 2679 3.052036 GCAACACATGAATGAACACACC 58.948 45.455 0.00 0.00 0.00 4.16
2991 3065 0.108138 GGGGAGACGATGAACCAGTG 60.108 60.000 0.00 0.00 0.00 3.66
3017 3091 5.882557 GGTTATCAGTATCCCAGCATAATGG 59.117 44.000 0.00 0.00 40.29 3.16
3204 3474 4.320870 GGGTTGAATCTTAAACCGAGTGA 58.679 43.478 3.59 0.00 45.70 3.41
3239 3509 1.338890 TTGGGGTGTGGTTCGACTGA 61.339 55.000 0.00 0.00 0.00 3.41
3267 3537 2.868253 GGTTGATTCCTGAACCCGG 58.132 57.895 0.00 0.00 36.39 5.73
3270 3540 0.704664 AGGGGGTTGATTCCTGAACC 59.295 55.000 0.00 0.00 40.92 3.62
3271 3541 1.341089 GGAGGGGGTTGATTCCTGAAC 60.341 57.143 0.00 0.00 0.00 3.18
3273 3543 0.919289 GGGAGGGGGTTGATTCCTGA 60.919 60.000 0.00 0.00 0.00 3.86
3275 3545 2.001269 CGGGAGGGGGTTGATTCCT 61.001 63.158 0.00 0.00 0.00 3.36
3276 3546 2.595655 CGGGAGGGGGTTGATTCC 59.404 66.667 0.00 0.00 0.00 3.01
3321 3591 0.668706 CCCAGTCAGCAGTCAACGAG 60.669 60.000 0.00 0.00 0.00 4.18
3322 3592 1.367471 CCCAGTCAGCAGTCAACGA 59.633 57.895 0.00 0.00 0.00 3.85
3324 3594 1.227943 TGCCCAGTCAGCAGTCAAC 60.228 57.895 0.00 0.00 34.69 3.18
3325 3595 3.239464 TGCCCAGTCAGCAGTCAA 58.761 55.556 0.00 0.00 34.69 3.18
3330 3600 4.648626 GGCACTGCCCAGTCAGCA 62.649 66.667 9.13 0.00 44.06 4.41
3340 3610 2.697761 CCTGCTGACATGGCACTGC 61.698 63.158 0.00 0.20 35.71 4.40
3350 3620 1.740025 GGCATTCTTGTACCTGCTGAC 59.260 52.381 0.00 0.00 35.03 3.51
3408 3680 4.046286 TGGTGAAAATTGCCCATAGTCT 57.954 40.909 0.00 0.00 0.00 3.24
3572 3847 8.159344 TCAATCCGTTTGGCAAAATTTTATTT 57.841 26.923 15.29 0.13 35.92 1.40
3579 3854 3.826157 TCTCTCAATCCGTTTGGCAAAAT 59.174 39.130 15.29 1.71 35.92 1.82
3583 3858 2.787473 ATCTCTCAATCCGTTTGGCA 57.213 45.000 0.00 0.00 35.92 4.92
3584 3859 3.009723 TGAATCTCTCAATCCGTTTGGC 58.990 45.455 0.00 0.00 35.92 4.52
3586 3861 6.426980 TTGATGAATCTCTCAATCCGTTTG 57.573 37.500 0.00 0.00 37.67 2.93
3589 3864 7.636150 ATTTTTGATGAATCTCTCAATCCGT 57.364 32.000 1.00 0.00 37.67 4.69
3590 3865 8.186163 TGAATTTTTGATGAATCTCTCAATCCG 58.814 33.333 1.00 0.00 37.67 4.18
3595 3870 9.865321 GGAATTGAATTTTTGATGAATCTCTCA 57.135 29.630 0.00 0.00 38.81 3.27
3597 3872 9.871238 CAGGAATTGAATTTTTGATGAATCTCT 57.129 29.630 0.00 0.00 0.00 3.10
4179 4481 3.008049 AGCCATTAGGTCAAACGAGAACT 59.992 43.478 0.00 0.00 39.34 3.01
4196 4498 1.194218 GGGTGTGCCAAATAAGCCAT 58.806 50.000 0.00 0.00 36.17 4.40
4268 4570 1.375523 CCCTCCCGGTTTTGACTCG 60.376 63.158 0.00 0.00 0.00 4.18
4309 4611 5.814481 TGACCTCAACATTCCACATGAATA 58.186 37.500 0.00 0.00 41.85 1.75
4350 4655 2.159310 GCTAGTCATCGCAGAGTGACTT 60.159 50.000 12.56 0.00 45.69 3.01
4380 4685 4.391155 TCCGCTTAACAGTACCAATGTTT 58.609 39.130 4.52 0.00 41.08 2.83
4383 4688 4.201910 CCATTCCGCTTAACAGTACCAATG 60.202 45.833 0.00 0.00 0.00 2.82
4398 4703 3.319405 TCAGAGATCTACTTCCATTCCGC 59.681 47.826 0.00 0.00 0.00 5.54
4411 4716 8.034215 CACAAGAGTTTGTATCTTCAGAGATCT 58.966 37.037 0.00 0.00 45.53 2.75
4422 4727 7.891183 ATATATCGGCACAAGAGTTTGTATC 57.109 36.000 0.00 0.00 45.53 2.24
4684 4995 3.755378 GTGGGAGCATATCAATTAGCCAG 59.245 47.826 0.00 0.00 0.00 4.85
4920 5234 2.224426 TGCGACAGACCTGTGGTAAATT 60.224 45.455 7.47 0.00 45.05 1.82
4927 5242 0.529833 AGAGATGCGACAGACCTGTG 59.470 55.000 7.47 1.92 45.05 3.66
4934 5249 2.545526 GAGAGAGAGAGAGATGCGACAG 59.454 54.545 0.00 0.00 0.00 3.51
4942 5257 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
4943 5258 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
4950 5265 3.994317 TGGAGAGAGAGAGAGAGAGAGA 58.006 50.000 0.00 0.00 0.00 3.10
4954 5269 3.202818 AGCAATGGAGAGAGAGAGAGAGA 59.797 47.826 0.00 0.00 0.00 3.10
4955 5270 3.317149 CAGCAATGGAGAGAGAGAGAGAG 59.683 52.174 0.00 0.00 0.00 3.20
4956 5271 3.289836 CAGCAATGGAGAGAGAGAGAGA 58.710 50.000 0.00 0.00 0.00 3.10
4957 5272 2.223876 GCAGCAATGGAGAGAGAGAGAG 60.224 54.545 0.00 0.00 0.00 3.20
4958 5273 1.755959 GCAGCAATGGAGAGAGAGAGA 59.244 52.381 0.00 0.00 0.00 3.10
4959 5274 1.758280 AGCAGCAATGGAGAGAGAGAG 59.242 52.381 0.00 0.00 0.00 3.20
4960 5275 1.863325 AGCAGCAATGGAGAGAGAGA 58.137 50.000 0.00 0.00 0.00 3.10
4961 5276 2.695127 AAGCAGCAATGGAGAGAGAG 57.305 50.000 0.00 0.00 0.00 3.20
4962 5277 2.355513 GGAAAGCAGCAATGGAGAGAGA 60.356 50.000 0.00 0.00 0.00 3.10
4963 5278 2.015587 GGAAAGCAGCAATGGAGAGAG 58.984 52.381 0.00 0.00 0.00 3.20
4964 5279 1.352017 TGGAAAGCAGCAATGGAGAGA 59.648 47.619 0.00 0.00 0.00 3.10
4965 5280 1.471684 GTGGAAAGCAGCAATGGAGAG 59.528 52.381 0.00 0.00 0.00 3.20
4966 5281 1.538047 GTGGAAAGCAGCAATGGAGA 58.462 50.000 0.00 0.00 0.00 3.71
4967 5282 0.529378 GGTGGAAAGCAGCAATGGAG 59.471 55.000 0.00 0.00 0.00 3.86
4968 5283 0.178967 TGGTGGAAAGCAGCAATGGA 60.179 50.000 0.00 0.00 0.00 3.41
4969 5284 0.899720 ATGGTGGAAAGCAGCAATGG 59.100 50.000 0.00 0.00 33.59 3.16
4991 5306 3.013219 TCTGTGTGTTTTACTTGCTGCA 58.987 40.909 0.00 0.00 0.00 4.41
4993 5308 4.553547 GCTCTCTGTGTGTTTTACTTGCTG 60.554 45.833 0.00 0.00 0.00 4.41
5014 5329 1.341187 ACTCTGCTACTTACCCTCGCT 60.341 52.381 0.00 0.00 0.00 4.93
5015 5330 1.104630 ACTCTGCTACTTACCCTCGC 58.895 55.000 0.00 0.00 0.00 5.03
5016 5331 2.099427 GGAACTCTGCTACTTACCCTCG 59.901 54.545 0.00 0.00 0.00 4.63
5017 5332 3.097614 TGGAACTCTGCTACTTACCCTC 58.902 50.000 0.00 0.00 0.00 4.30
5018 5333 2.832733 GTGGAACTCTGCTACTTACCCT 59.167 50.000 0.00 0.00 0.00 4.34
5019 5334 3.248495 GTGGAACTCTGCTACTTACCC 57.752 52.381 0.00 0.00 0.00 3.69
5041 5356 1.008538 CAGTTCAGGCGTTGGCAAC 60.009 57.895 20.27 20.27 42.47 4.17
5042 5357 2.192861 CCAGTTCAGGCGTTGGCAA 61.193 57.895 0.00 0.00 42.47 4.52
5043 5358 2.594303 CCAGTTCAGGCGTTGGCA 60.594 61.111 0.00 0.00 42.47 4.92
5044 5359 2.281484 TCCAGTTCAGGCGTTGGC 60.281 61.111 0.00 0.00 38.90 4.52
5045 5360 2.317609 CGTCCAGTTCAGGCGTTGG 61.318 63.158 0.00 0.00 0.00 3.77
5046 5361 2.954753 GCGTCCAGTTCAGGCGTTG 61.955 63.158 0.00 0.00 33.01 4.10
5047 5362 2.665185 GCGTCCAGTTCAGGCGTT 60.665 61.111 0.00 0.00 33.01 4.84
5048 5363 3.616721 AGCGTCCAGTTCAGGCGT 61.617 61.111 0.00 0.00 33.01 5.68
5049 5364 2.486636 TACAGCGTCCAGTTCAGGCG 62.487 60.000 0.00 0.00 0.00 5.52
5050 5365 0.737715 CTACAGCGTCCAGTTCAGGC 60.738 60.000 0.00 0.00 0.00 4.85
5051 5366 0.603569 ACTACAGCGTCCAGTTCAGG 59.396 55.000 0.00 0.00 0.00 3.86
5052 5367 1.269723 TGACTACAGCGTCCAGTTCAG 59.730 52.381 0.00 0.00 32.97 3.02
5053 5368 1.000607 GTGACTACAGCGTCCAGTTCA 60.001 52.381 0.00 0.00 32.97 3.18
5054 5369 1.669211 GGTGACTACAGCGTCCAGTTC 60.669 57.143 0.00 0.00 34.87 3.01
5055 5370 0.317479 GGTGACTACAGCGTCCAGTT 59.683 55.000 0.00 0.00 34.87 3.16
5056 5371 1.965219 GGTGACTACAGCGTCCAGT 59.035 57.895 0.00 0.00 34.87 4.00
5057 5372 4.891566 GGTGACTACAGCGTCCAG 57.108 61.111 0.00 0.00 34.87 3.86
5063 5378 6.264744 TCCTACACATATTAGGTGACTACAGC 59.735 42.308 14.87 0.00 44.30 4.40
5064 5379 7.040340 CCTCCTACACATATTAGGTGACTACAG 60.040 44.444 14.87 4.50 44.30 2.74
5065 5380 6.776116 CCTCCTACACATATTAGGTGACTACA 59.224 42.308 14.87 0.00 44.30 2.74
5066 5381 6.294620 GCCTCCTACACATATTAGGTGACTAC 60.295 46.154 14.87 0.00 44.30 2.73
5067 5382 5.773680 GCCTCCTACACATATTAGGTGACTA 59.226 44.000 14.87 0.00 43.67 2.59
5068 5383 8.396425 GTAGCCTCCTACACATATTAGGTGACT 61.396 44.444 14.87 0.00 42.81 3.41
5069 5384 4.589374 AGCCTCCTACACATATTAGGTGAC 59.411 45.833 14.87 0.00 39.53 3.67
5070 5385 4.816126 AGCCTCCTACACATATTAGGTGA 58.184 43.478 14.87 0.00 39.53 4.02
5071 5386 5.538813 TGTAGCCTCCTACACATATTAGGTG 59.461 44.000 6.92 6.92 46.72 4.00
5072 5387 5.712752 TGTAGCCTCCTACACATATTAGGT 58.287 41.667 0.00 0.00 46.72 3.08
5083 5398 2.028930 CCGATCCAATGTAGCCTCCTAC 60.029 54.545 0.00 0.00 43.43 3.18
5084 5399 2.248248 CCGATCCAATGTAGCCTCCTA 58.752 52.381 0.00 0.00 0.00 2.94
5085 5400 1.051812 CCGATCCAATGTAGCCTCCT 58.948 55.000 0.00 0.00 0.00 3.69
5086 5401 0.603975 GCCGATCCAATGTAGCCTCC 60.604 60.000 0.00 0.00 0.00 4.30
5087 5402 0.394565 AGCCGATCCAATGTAGCCTC 59.605 55.000 0.00 0.00 0.00 4.70
5088 5403 0.839946 AAGCCGATCCAATGTAGCCT 59.160 50.000 0.00 0.00 0.00 4.58
5089 5404 1.680338 AAAGCCGATCCAATGTAGCC 58.320 50.000 0.00 0.00 0.00 3.93
5090 5405 2.682856 TGAAAAGCCGATCCAATGTAGC 59.317 45.455 0.00 0.00 0.00 3.58
5091 5406 4.191544 TCTGAAAAGCCGATCCAATGTAG 58.808 43.478 0.00 0.00 0.00 2.74
5092 5407 4.214986 TCTGAAAAGCCGATCCAATGTA 57.785 40.909 0.00 0.00 0.00 2.29
5093 5408 3.071874 TCTGAAAAGCCGATCCAATGT 57.928 42.857 0.00 0.00 0.00 2.71
5094 5409 4.214971 CCTATCTGAAAAGCCGATCCAATG 59.785 45.833 0.00 0.00 0.00 2.82
5095 5410 4.392940 CCTATCTGAAAAGCCGATCCAAT 58.607 43.478 0.00 0.00 0.00 3.16
5096 5411 3.808728 CCTATCTGAAAAGCCGATCCAA 58.191 45.455 0.00 0.00 0.00 3.53
5097 5412 2.485479 GCCTATCTGAAAAGCCGATCCA 60.485 50.000 0.00 0.00 0.00 3.41
5098 5413 2.147150 GCCTATCTGAAAAGCCGATCC 58.853 52.381 0.00 0.00 0.00 3.36
5099 5414 2.147150 GGCCTATCTGAAAAGCCGATC 58.853 52.381 0.00 0.00 33.18 3.69
5100 5415 2.262423 GGCCTATCTGAAAAGCCGAT 57.738 50.000 0.00 0.00 33.18 4.18
5101 5416 3.780624 GGCCTATCTGAAAAGCCGA 57.219 52.632 0.00 0.00 33.18 5.54
5103 5418 2.948315 CTCAAGGCCTATCTGAAAAGCC 59.052 50.000 5.16 7.00 44.20 4.35
5104 5419 3.876320 CTCTCAAGGCCTATCTGAAAAGC 59.124 47.826 5.16 0.00 0.00 3.51
5105 5420 4.450053 CCTCTCAAGGCCTATCTGAAAAG 58.550 47.826 5.16 6.83 35.37 2.27
5106 5421 4.494091 CCTCTCAAGGCCTATCTGAAAA 57.506 45.455 5.16 0.00 35.37 2.29
5120 5435 2.639839 AGCTACTTTCCTTGCCTCTCAA 59.360 45.455 0.00 0.00 0.00 3.02
5121 5436 2.260822 AGCTACTTTCCTTGCCTCTCA 58.739 47.619 0.00 0.00 0.00 3.27
5122 5437 3.342377 AAGCTACTTTCCTTGCCTCTC 57.658 47.619 0.00 0.00 0.00 3.20
5123 5438 4.565861 GGTTAAGCTACTTTCCTTGCCTCT 60.566 45.833 0.00 0.00 0.00 3.69
5124 5439 3.690139 GGTTAAGCTACTTTCCTTGCCTC 59.310 47.826 0.00 0.00 0.00 4.70
5125 5440 3.073946 TGGTTAAGCTACTTTCCTTGCCT 59.926 43.478 6.19 0.00 0.00 4.75
5126 5441 3.190744 GTGGTTAAGCTACTTTCCTTGCC 59.809 47.826 6.19 0.00 0.00 4.52
5127 5442 3.190744 GGTGGTTAAGCTACTTTCCTTGC 59.809 47.826 6.19 0.00 0.00 4.01
5128 5443 4.394729 TGGTGGTTAAGCTACTTTCCTTG 58.605 43.478 6.19 0.00 0.00 3.61
5129 5444 4.717279 TGGTGGTTAAGCTACTTTCCTT 57.283 40.909 6.19 0.00 0.00 3.36
5130 5445 4.288626 TGATGGTGGTTAAGCTACTTTCCT 59.711 41.667 6.19 0.00 0.00 3.36
5131 5446 4.585879 TGATGGTGGTTAAGCTACTTTCC 58.414 43.478 6.19 0.62 0.00 3.13
5132 5447 5.449177 GCATGATGGTGGTTAAGCTACTTTC 60.449 44.000 6.19 5.16 0.00 2.62
5133 5448 4.399303 GCATGATGGTGGTTAAGCTACTTT 59.601 41.667 6.19 0.00 0.00 2.66
5134 5449 3.947834 GCATGATGGTGGTTAAGCTACTT 59.052 43.478 6.19 0.00 0.00 2.24
5135 5450 3.054434 TGCATGATGGTGGTTAAGCTACT 60.054 43.478 6.19 0.00 0.00 2.57
5136 5451 3.278574 TGCATGATGGTGGTTAAGCTAC 58.721 45.455 6.19 2.85 0.00 3.58
5137 5452 3.544684 CTGCATGATGGTGGTTAAGCTA 58.455 45.455 6.19 0.00 0.00 3.32
5138 5453 2.372264 CTGCATGATGGTGGTTAAGCT 58.628 47.619 6.19 0.00 0.00 3.74
5139 5454 1.202336 GCTGCATGATGGTGGTTAAGC 60.202 52.381 0.00 0.00 0.00 3.09
5140 5455 2.093890 TGCTGCATGATGGTGGTTAAG 58.906 47.619 0.00 0.00 0.00 1.85
5141 5456 2.212812 TGCTGCATGATGGTGGTTAA 57.787 45.000 0.00 0.00 0.00 2.01
5142 5457 2.093890 CTTGCTGCATGATGGTGGTTA 58.906 47.619 9.72 0.00 0.00 2.85
5143 5458 0.892755 CTTGCTGCATGATGGTGGTT 59.107 50.000 9.72 0.00 0.00 3.67
5144 5459 0.251474 ACTTGCTGCATGATGGTGGT 60.251 50.000 20.66 0.00 0.00 4.16
5145 5460 1.753930 TACTTGCTGCATGATGGTGG 58.246 50.000 20.66 0.04 0.00 4.61
5146 5461 3.853831 TTTACTTGCTGCATGATGGTG 57.146 42.857 20.66 1.26 0.00 4.17
5147 5462 3.573538 TGTTTTACTTGCTGCATGATGGT 59.426 39.130 20.66 9.48 0.00 3.55
5148 5463 3.922240 GTGTTTTACTTGCTGCATGATGG 59.078 43.478 20.66 4.44 0.00 3.51
5149 5464 4.383649 GTGTGTTTTACTTGCTGCATGATG 59.616 41.667 20.66 6.71 0.00 3.07
5150 5465 4.037803 TGTGTGTTTTACTTGCTGCATGAT 59.962 37.500 20.66 8.67 0.00 2.45
5151 5466 3.379688 TGTGTGTTTTACTTGCTGCATGA 59.620 39.130 20.66 0.00 0.00 3.07
5152 5467 3.704512 TGTGTGTTTTACTTGCTGCATG 58.295 40.909 13.31 13.31 0.00 4.06
5153 5468 3.631686 TCTGTGTGTTTTACTTGCTGCAT 59.368 39.130 1.84 0.00 0.00 3.96
5154 5469 3.013219 TCTGTGTGTTTTACTTGCTGCA 58.987 40.909 0.00 0.00 0.00 4.41
5155 5470 3.621794 CTCTGTGTGTTTTACTTGCTGC 58.378 45.455 0.00 0.00 0.00 5.25
5156 5471 3.621794 GCTCTGTGTGTTTTACTTGCTG 58.378 45.455 0.00 0.00 0.00 4.41
5157 5472 2.287915 CGCTCTGTGTGTTTTACTTGCT 59.712 45.455 0.00 0.00 0.00 3.91
5158 5473 2.639751 CGCTCTGTGTGTTTTACTTGC 58.360 47.619 0.00 0.00 0.00 4.01
5159 5474 2.639751 GCGCTCTGTGTGTTTTACTTG 58.360 47.619 0.00 0.00 0.00 3.16
5160 5475 1.260561 CGCGCTCTGTGTGTTTTACTT 59.739 47.619 5.56 0.00 0.00 2.24
5161 5476 0.859232 CGCGCTCTGTGTGTTTTACT 59.141 50.000 5.56 0.00 0.00 2.24
5162 5477 0.856641 TCGCGCTCTGTGTGTTTTAC 59.143 50.000 5.56 0.00 0.00 2.01
5163 5478 1.136690 CTCGCGCTCTGTGTGTTTTA 58.863 50.000 5.56 0.00 0.00 1.52
5164 5479 1.498865 CCTCGCGCTCTGTGTGTTTT 61.499 55.000 5.56 0.00 0.00 2.43
5165 5480 1.956170 CCTCGCGCTCTGTGTGTTT 60.956 57.895 5.56 0.00 0.00 2.83
5166 5481 2.356313 CCTCGCGCTCTGTGTGTT 60.356 61.111 5.56 0.00 0.00 3.32
5167 5482 4.363990 CCCTCGCGCTCTGTGTGT 62.364 66.667 5.56 0.00 0.00 3.72
5170 5485 3.997064 CTTCCCCTCGCGCTCTGTG 62.997 68.421 5.56 0.00 0.00 3.66
5171 5486 3.764466 CTTCCCCTCGCGCTCTGT 61.764 66.667 5.56 0.00 0.00 3.41
5172 5487 2.343163 CTACTTCCCCTCGCGCTCTG 62.343 65.000 5.56 0.00 0.00 3.35
5173 5488 2.044252 TACTTCCCCTCGCGCTCT 60.044 61.111 5.56 0.00 0.00 4.09
5174 5489 2.413765 CTACTTCCCCTCGCGCTC 59.586 66.667 5.56 0.00 0.00 5.03
5175 5490 3.839432 GCTACTTCCCCTCGCGCT 61.839 66.667 5.56 0.00 0.00 5.92
5176 5491 4.143333 TGCTACTTCCCCTCGCGC 62.143 66.667 0.00 0.00 0.00 6.86
5177 5492 2.105128 CTGCTACTTCCCCTCGCG 59.895 66.667 0.00 0.00 0.00 5.87
5178 5493 1.324005 ACTCTGCTACTTCCCCTCGC 61.324 60.000 0.00 0.00 0.00 5.03
5179 5494 1.135333 GAACTCTGCTACTTCCCCTCG 59.865 57.143 0.00 0.00 0.00 4.63
5180 5495 1.483004 GGAACTCTGCTACTTCCCCTC 59.517 57.143 0.00 0.00 0.00 4.30
5181 5496 1.203313 TGGAACTCTGCTACTTCCCCT 60.203 52.381 0.00 0.00 33.69 4.79
5182 5497 1.066071 GTGGAACTCTGCTACTTCCCC 60.066 57.143 0.00 0.00 33.69 4.81
5183 5498 2.388310 GTGGAACTCTGCTACTTCCC 57.612 55.000 0.00 0.00 33.69 3.97
5303 5618 2.093890 TGCTGCATGATGGTGGTTAAG 58.906 47.619 0.00 0.00 0.00 1.85
5304 5619 2.212812 TGCTGCATGATGGTGGTTAA 57.787 45.000 0.00 0.00 0.00 2.01
5305 5620 2.093890 CTTGCTGCATGATGGTGGTTA 58.906 47.619 9.72 0.00 0.00 2.85
5306 5621 0.892755 CTTGCTGCATGATGGTGGTT 59.107 50.000 9.72 0.00 0.00 3.67
5308 5623 0.681887 TCCTTGCTGCATGATGGTGG 60.682 55.000 16.19 5.01 0.00 4.61
5309 5624 1.179152 TTCCTTGCTGCATGATGGTG 58.821 50.000 16.19 0.48 0.00 4.17
5310 5625 1.927487 TTTCCTTGCTGCATGATGGT 58.073 45.000 16.19 0.00 0.00 3.55
5311 5626 2.028839 TGTTTTCCTTGCTGCATGATGG 60.029 45.455 16.19 10.34 0.00 3.51
5312 5627 2.991190 GTGTTTTCCTTGCTGCATGATG 59.009 45.455 16.19 1.82 0.00 3.07
5313 5628 2.629137 TGTGTTTTCCTTGCTGCATGAT 59.371 40.909 16.19 0.00 0.00 2.45
5314 5629 2.030371 TGTGTTTTCCTTGCTGCATGA 58.970 42.857 16.19 7.60 0.00 3.07
5315 5630 2.512485 TGTGTTTTCCTTGCTGCATG 57.488 45.000 1.84 5.77 0.00 4.06
5316 5631 4.081406 TCTATGTGTTTTCCTTGCTGCAT 58.919 39.130 1.84 0.00 0.00 3.96
5317 5632 3.485394 TCTATGTGTTTTCCTTGCTGCA 58.515 40.909 0.00 0.00 0.00 4.41
5318 5633 3.671702 GCTCTATGTGTTTTCCTTGCTGC 60.672 47.826 0.00 0.00 0.00 5.25
5319 5634 3.425359 CGCTCTATGTGTTTTCCTTGCTG 60.425 47.826 0.00 0.00 0.00 4.41
5320 5635 2.744202 CGCTCTATGTGTTTTCCTTGCT 59.256 45.455 0.00 0.00 0.00 3.91
5321 5636 2.729156 GCGCTCTATGTGTTTTCCTTGC 60.729 50.000 0.00 0.00 0.00 4.01
5322 5637 2.474526 CGCGCTCTATGTGTTTTCCTTG 60.475 50.000 5.56 0.00 0.00 3.61
5323 5638 1.732259 CGCGCTCTATGTGTTTTCCTT 59.268 47.619 5.56 0.00 0.00 3.36
5324 5639 1.067142 TCGCGCTCTATGTGTTTTCCT 60.067 47.619 5.56 0.00 0.00 3.36
5325 5640 1.324736 CTCGCGCTCTATGTGTTTTCC 59.675 52.381 5.56 0.00 0.00 3.13
5326 5641 1.324736 CCTCGCGCTCTATGTGTTTTC 59.675 52.381 5.56 0.00 0.00 2.29
5327 5642 1.359848 CCTCGCGCTCTATGTGTTTT 58.640 50.000 5.56 0.00 0.00 2.43
5328 5643 0.460284 CCCTCGCGCTCTATGTGTTT 60.460 55.000 5.56 0.00 0.00 2.83
5329 5644 1.141881 CCCTCGCGCTCTATGTGTT 59.858 57.895 5.56 0.00 0.00 3.32
5330 5645 2.786495 CCCCTCGCGCTCTATGTGT 61.786 63.158 5.56 0.00 0.00 3.72
5331 5646 2.016393 TTCCCCTCGCGCTCTATGTG 62.016 60.000 5.56 0.00 0.00 3.21
5332 5647 1.739338 CTTCCCCTCGCGCTCTATGT 61.739 60.000 5.56 0.00 0.00 2.29
5333 5648 1.006805 CTTCCCCTCGCGCTCTATG 60.007 63.158 5.56 0.00 0.00 2.23
5334 5649 0.178998 TACTTCCCCTCGCGCTCTAT 60.179 55.000 5.56 0.00 0.00 1.98
5335 5650 0.818445 CTACTTCCCCTCGCGCTCTA 60.818 60.000 5.56 0.00 0.00 2.43
5336 5651 2.044252 TACTTCCCCTCGCGCTCT 60.044 61.111 5.56 0.00 0.00 4.09
5337 5652 2.413765 CTACTTCCCCTCGCGCTC 59.586 66.667 5.56 0.00 0.00 5.03
5338 5653 3.839432 GCTACTTCCCCTCGCGCT 61.839 66.667 5.56 0.00 0.00 5.92
5339 5654 4.143333 TGCTACTTCCCCTCGCGC 62.143 66.667 0.00 0.00 0.00 6.86
5340 5655 2.105128 CTGCTACTTCCCCTCGCG 59.895 66.667 0.00 0.00 0.00 5.87
5341 5656 1.324005 ACTCTGCTACTTCCCCTCGC 61.324 60.000 0.00 0.00 0.00 5.03
5342 5657 1.135333 GAACTCTGCTACTTCCCCTCG 59.865 57.143 0.00 0.00 0.00 4.63
5343 5658 1.483004 GGAACTCTGCTACTTCCCCTC 59.517 57.143 0.00 0.00 0.00 4.30
5344 5659 1.203313 TGGAACTCTGCTACTTCCCCT 60.203 52.381 0.00 0.00 33.69 4.79
5345 5660 1.066071 GTGGAACTCTGCTACTTCCCC 60.066 57.143 0.00 0.00 33.69 4.81
5346 5661 2.388310 GTGGAACTCTGCTACTTCCC 57.612 55.000 0.00 0.00 33.69 3.97
5359 5674 0.028902 GGCGTTGACAACAGTGGAAC 59.971 55.000 18.09 0.00 0.00 3.62
5360 5675 0.107410 AGGCGTTGACAACAGTGGAA 60.107 50.000 18.09 0.00 0.00 3.53
5361 5676 0.813610 CAGGCGTTGACAACAGTGGA 60.814 55.000 18.09 0.00 0.00 4.02
5362 5677 0.813610 TCAGGCGTTGACAACAGTGG 60.814 55.000 18.09 3.12 0.00 4.00
5363 5678 1.013596 TTCAGGCGTTGACAACAGTG 58.986 50.000 18.09 11.20 34.94 3.66
5364 5679 1.014352 GTTCAGGCGTTGACAACAGT 58.986 50.000 18.09 0.00 34.94 3.55
5365 5680 1.003545 CAGTTCAGGCGTTGACAACAG 60.004 52.381 18.09 11.48 34.94 3.16
5366 5681 1.013596 CAGTTCAGGCGTTGACAACA 58.986 50.000 18.09 0.00 34.94 3.33
5367 5682 0.307760 CCAGTTCAGGCGTTGACAAC 59.692 55.000 8.34 8.34 34.94 3.32
5368 5683 0.179234 TCCAGTTCAGGCGTTGACAA 59.821 50.000 0.00 0.00 34.94 3.18
5369 5684 0.531974 GTCCAGTTCAGGCGTTGACA 60.532 55.000 0.00 0.00 34.94 3.58
5370 5685 0.531974 TGTCCAGTTCAGGCGTTGAC 60.532 55.000 0.00 0.00 34.94 3.18
5371 5686 0.531974 GTGTCCAGTTCAGGCGTTGA 60.532 55.000 0.00 0.00 0.00 3.18
5372 5687 0.532862 AGTGTCCAGTTCAGGCGTTG 60.533 55.000 0.00 0.00 0.00 4.10
5373 5688 0.532862 CAGTGTCCAGTTCAGGCGTT 60.533 55.000 0.00 0.00 0.00 4.84
5374 5689 1.069765 CAGTGTCCAGTTCAGGCGT 59.930 57.895 0.00 0.00 0.00 5.68
5375 5690 0.317160 TACAGTGTCCAGTTCAGGCG 59.683 55.000 0.00 0.00 0.00 5.52
5376 5691 1.344763 ACTACAGTGTCCAGTTCAGGC 59.655 52.381 0.00 0.00 0.00 4.85
5377 5692 2.628178 TGACTACAGTGTCCAGTTCAGG 59.372 50.000 0.00 0.00 36.21 3.86
5378 5693 3.553096 GGTGACTACAGTGTCCAGTTCAG 60.553 52.174 0.00 0.00 36.21 3.02
5379 5694 2.364324 GGTGACTACAGTGTCCAGTTCA 59.636 50.000 0.00 0.00 36.21 3.18
5380 5695 2.628657 AGGTGACTACAGTGTCCAGTTC 59.371 50.000 0.00 0.00 40.61 3.01
5381 5696 2.679082 AGGTGACTACAGTGTCCAGTT 58.321 47.619 0.00 0.00 40.61 3.16
5382 5697 2.383442 AGGTGACTACAGTGTCCAGT 57.617 50.000 0.00 0.00 40.61 4.00
5383 5698 6.096987 ACATATTAGGTGACTACAGTGTCCAG 59.903 42.308 0.00 0.00 44.30 3.86
5384 5699 5.955959 ACATATTAGGTGACTACAGTGTCCA 59.044 40.000 0.00 0.00 44.30 4.02
5385 5700 6.127423 ACACATATTAGGTGACTACAGTGTCC 60.127 42.308 14.87 0.00 44.30 4.02
5386 5701 6.864342 ACACATATTAGGTGACTACAGTGTC 58.136 40.000 14.87 0.00 44.30 3.67
5387 5702 6.852420 ACACATATTAGGTGACTACAGTGT 57.148 37.500 14.87 0.00 44.30 3.55
5388 5703 7.284716 TCCTACACATATTAGGTGACTACAGTG 59.715 40.741 14.87 0.00 44.30 3.66
5389 5704 7.351952 TCCTACACATATTAGGTGACTACAGT 58.648 38.462 14.87 0.00 44.30 3.55
5390 5705 7.040340 CCTCCTACACATATTAGGTGACTACAG 60.040 44.444 14.87 4.50 44.30 2.74
5391 5706 6.776116 CCTCCTACACATATTAGGTGACTACA 59.224 42.308 14.87 0.00 44.30 2.74
5392 5707 6.294620 GCCTCCTACACATATTAGGTGACTAC 60.295 46.154 14.87 0.00 44.30 2.73
5393 5708 5.773680 GCCTCCTACACATATTAGGTGACTA 59.226 44.000 14.87 0.00 43.67 2.59
5394 5709 8.396425 GTAGCCTCCTACACATATTAGGTGACT 61.396 44.444 14.87 0.00 42.81 3.41
5395 5710 4.589374 AGCCTCCTACACATATTAGGTGAC 59.411 45.833 14.87 0.00 39.53 3.67
5396 5711 4.816126 AGCCTCCTACACATATTAGGTGA 58.184 43.478 14.87 0.00 39.53 4.02
5397 5712 5.538813 TGTAGCCTCCTACACATATTAGGTG 59.461 44.000 6.92 6.92 46.72 4.00
5398 5713 5.712752 TGTAGCCTCCTACACATATTAGGT 58.287 41.667 0.00 0.00 46.72 3.08
5409 5724 2.028930 CCGATCCAATGTAGCCTCCTAC 60.029 54.545 0.00 0.00 43.43 3.18
5410 5725 2.248248 CCGATCCAATGTAGCCTCCTA 58.752 52.381 0.00 0.00 0.00 2.94
5411 5726 1.051812 CCGATCCAATGTAGCCTCCT 58.948 55.000 0.00 0.00 0.00 3.69
5412 5727 0.603975 GCCGATCCAATGTAGCCTCC 60.604 60.000 0.00 0.00 0.00 4.30
5413 5728 0.394565 AGCCGATCCAATGTAGCCTC 59.605 55.000 0.00 0.00 0.00 4.70
5414 5729 0.839946 AAGCCGATCCAATGTAGCCT 59.160 50.000 0.00 0.00 0.00 4.58
5415 5730 1.680338 AAAGCCGATCCAATGTAGCC 58.320 50.000 0.00 0.00 0.00 3.93
5416 5731 2.682856 TGAAAAGCCGATCCAATGTAGC 59.317 45.455 0.00 0.00 0.00 3.58
5417 5732 4.191544 TCTGAAAAGCCGATCCAATGTAG 58.808 43.478 0.00 0.00 0.00 2.74
5418 5733 4.214986 TCTGAAAAGCCGATCCAATGTA 57.785 40.909 0.00 0.00 0.00 2.29
5419 5734 3.071874 TCTGAAAAGCCGATCCAATGT 57.928 42.857 0.00 0.00 0.00 2.71
5420 5735 4.214971 CCTATCTGAAAAGCCGATCCAATG 59.785 45.833 0.00 0.00 0.00 2.82
5421 5736 4.392940 CCTATCTGAAAAGCCGATCCAAT 58.607 43.478 0.00 0.00 0.00 3.16
5422 5737 3.808728 CCTATCTGAAAAGCCGATCCAA 58.191 45.455 0.00 0.00 0.00 3.53
5423 5738 2.485479 GCCTATCTGAAAAGCCGATCCA 60.485 50.000 0.00 0.00 0.00 3.41
5424 5739 2.147150 GCCTATCTGAAAAGCCGATCC 58.853 52.381 0.00 0.00 0.00 3.36
5425 5740 2.147150 GGCCTATCTGAAAAGCCGATC 58.853 52.381 0.00 0.00 33.18 3.69
5426 5741 2.262423 GGCCTATCTGAAAAGCCGAT 57.738 50.000 0.00 0.00 33.18 4.18
5427 5742 3.780624 GGCCTATCTGAAAAGCCGA 57.219 52.632 0.00 0.00 33.18 5.54
5429 5744 2.948315 CTCAAGGCCTATCTGAAAAGCC 59.052 50.000 5.16 7.00 44.20 4.35
5430 5745 3.876320 CTCTCAAGGCCTATCTGAAAAGC 59.124 47.826 5.16 0.00 0.00 3.51
5431 5746 4.450053 CCTCTCAAGGCCTATCTGAAAAG 58.550 47.826 5.16 6.83 35.37 2.27
5432 5747 4.494091 CCTCTCAAGGCCTATCTGAAAA 57.506 45.455 5.16 0.00 35.37 2.29
5502 5817 3.157881 TGCGATTATCTAGGAGGGTCTG 58.842 50.000 0.00 0.00 0.00 3.51
5506 5821 5.419155 TGTATTCTGCGATTATCTAGGAGGG 59.581 44.000 0.00 0.00 0.00 4.30
5519 5834 6.606234 TTGTAACAAACTTGTATTCTGCGA 57.394 33.333 0.00 0.00 41.31 5.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.