Multiple sequence alignment - TraesCS3A01G191300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G191300 chr3A 100.000 7529 0 0 1 7529 243860967 243868495 0.000000e+00 13904.0
1 TraesCS3A01G191300 chr3A 96.140 285 10 1 7245 7529 16702740 16703023 1.480000e-126 464.0
2 TraesCS3A01G191300 chr3A 95.730 281 12 0 7249 7529 10597663 10597943 3.200000e-123 453.0
3 TraesCS3A01G191300 chr3A 95.730 281 12 0 7249 7529 16668166 16668446 3.200000e-123 453.0
4 TraesCS3A01G191300 chr3A 95.035 282 12 2 7249 7529 737680598 737680318 6.930000e-120 442.0
5 TraesCS3A01G191300 chr3A 95.652 69 3 0 924 992 243861820 243861888 2.220000e-20 111.0
6 TraesCS3A01G191300 chr3A 95.652 69 3 0 854 922 243861890 243861958 2.220000e-20 111.0
7 TraesCS3A01G191300 chr3D 95.377 2855 76 14 2280 5100 185062450 185065282 0.000000e+00 4490.0
8 TraesCS3A01G191300 chr3D 97.758 1695 35 3 5101 6795 185065343 185067034 0.000000e+00 2916.0
9 TraesCS3A01G191300 chr3D 90.281 926 77 10 3 916 185058106 185059030 0.000000e+00 1199.0
10 TraesCS3A01G191300 chr3D 91.678 721 13 6 1101 1807 185059096 185059783 0.000000e+00 955.0
11 TraesCS3A01G191300 chr3D 83.128 486 68 12 261 738 114359250 114359729 1.500000e-116 431.0
12 TraesCS3A01G191300 chr3D 91.935 310 22 3 6941 7250 185067055 185067361 1.500000e-116 431.0
13 TraesCS3A01G191300 chr3D 82.236 501 84 4 263 761 433434373 433433876 1.940000e-115 427.0
14 TraesCS3A01G191300 chr3D 95.769 260 11 0 1909 2168 185060827 185061086 3.250000e-113 420.0
15 TraesCS3A01G191300 chr3D 87.919 149 15 3 3 150 603165701 603165555 1.000000e-38 172.0
16 TraesCS3A01G191300 chr3D 96.703 91 3 0 2159 2249 185062363 185062453 1.310000e-32 152.0
17 TraesCS3A01G191300 chr3D 95.238 84 4 0 1825 1908 185060673 185060756 4.740000e-27 134.0
18 TraesCS3A01G191300 chr3D 97.500 40 1 0 5101 5140 185065319 185065280 1.360000e-07 69.4
19 TraesCS3A01G191300 chr3D 96.970 33 1 0 2245 2277 197867044 197867076 1.000000e-03 56.5
20 TraesCS3A01G191300 chr3B 94.902 2452 75 17 2668 5100 263782600 263785020 0.000000e+00 3790.0
21 TraesCS3A01G191300 chr3B 96.205 2108 64 7 5146 7250 263785151 263787245 0.000000e+00 3435.0
22 TraesCS3A01G191300 chr3B 96.140 285 4 4 1167 1445 263782319 263782602 6.880000e-125 459.0
23 TraesCS3A01G191300 chr3B 91.531 307 21 3 3 304 263744122 263744428 1.170000e-112 418.0
24 TraesCS3A01G191300 chr3B 98.795 83 1 0 5101 5183 263785081 263785163 1.690000e-31 148.0
25 TraesCS3A01G191300 chr3B 77.637 237 52 1 638 874 486412755 486412520 7.870000e-30 143.0
26 TraesCS3A01G191300 chr2A 82.556 665 98 11 261 916 202052330 202052985 3.050000e-158 569.0
27 TraesCS3A01G191300 chr2A 95.760 283 11 1 7247 7529 158027385 158027666 8.910000e-124 455.0
28 TraesCS3A01G191300 chr2A 88.079 151 14 3 3 150 13836747 13836896 7.760000e-40 176.0
29 TraesCS3A01G191300 chr2A 96.970 33 1 0 1044 1076 29831753 29831721 1.000000e-03 56.5
30 TraesCS3A01G191300 chr7D 80.744 618 109 9 261 874 629439896 629440507 2.460000e-129 473.0
31 TraesCS3A01G191300 chr1A 96.466 283 10 0 7247 7529 542819630 542819912 1.140000e-127 468.0
32 TraesCS3A01G191300 chr1A 95.406 283 13 0 7247 7529 41374289 41374007 1.150000e-122 451.0
33 TraesCS3A01G191300 chr1A 80.747 509 90 8 261 766 301145125 301144622 2.550000e-104 390.0
34 TraesCS3A01G191300 chr1A 92.105 38 3 0 5047 5084 164468749 164468786 4.000000e-03 54.7
35 TraesCS3A01G191300 chr7A 95.423 284 13 0 7246 7529 95815660 95815943 3.200000e-123 453.0
36 TraesCS3A01G191300 chr7A 95.018 281 14 0 7249 7529 681572447 681572167 6.930000e-120 442.0
37 TraesCS3A01G191300 chr7A 100.000 41 0 0 5101 5141 701308977 701309017 8.100000e-10 76.8
38 TraesCS3A01G191300 chr2D 83.836 464 70 4 261 722 190119392 190119852 3.230000e-118 436.0
39 TraesCS3A01G191300 chr2D 82.495 457 71 8 267 719 448102330 448101879 7.080000e-105 392.0
40 TraesCS3A01G191300 chr2D 94.643 112 4 1 151 260 17987194 17987083 1.000000e-38 172.0
41 TraesCS3A01G191300 chr2D 94.643 112 4 1 151 260 453746097 453746208 1.000000e-38 172.0
42 TraesCS3A01G191300 chr2D 94.643 112 4 1 151 260 637305846 637305957 1.000000e-38 172.0
43 TraesCS3A01G191300 chr2D 85.806 155 17 3 3 153 305998376 305998223 7.820000e-35 159.0
44 TraesCS3A01G191300 chr2D 100.000 33 0 0 2245 2277 649753729 649753761 2.270000e-05 62.1
45 TraesCS3A01G191300 chr2D 96.774 31 1 0 2246 2276 558109289 558109259 1.400000e-02 52.8
46 TraesCS3A01G191300 chr5B 78.634 571 107 12 260 823 548468182 548468744 1.540000e-96 364.0
47 TraesCS3A01G191300 chr5B 90.698 129 7 3 134 260 615161124 615161249 4.670000e-37 167.0
48 TraesCS3A01G191300 chr5B 97.500 40 1 0 5101 5140 655703217 655703178 1.360000e-07 69.4
49 TraesCS3A01G191300 chr5B 94.595 37 0 2 2243 2277 523190397 523190433 1.000000e-03 56.5
50 TraesCS3A01G191300 chr5B 96.970 33 0 1 2245 2277 523190485 523190454 4.000000e-03 54.7
51 TraesCS3A01G191300 chrUn 94.643 112 4 1 151 260 233522412 233522523 1.000000e-38 172.0
52 TraesCS3A01G191300 chrUn 94.643 112 4 1 151 260 257946973 257946862 1.000000e-38 172.0
53 TraesCS3A01G191300 chr4D 94.643 112 4 1 151 260 123691823 123691712 1.000000e-38 172.0
54 TraesCS3A01G191300 chr1B 87.333 150 16 3 3 150 317189691 317189543 1.300000e-37 169.0
55 TraesCS3A01G191300 chr1B 100.000 32 0 0 2246 2277 679033711 679033742 8.160000e-05 60.2
56 TraesCS3A01G191300 chr5D 86.755 151 16 2 3 150 520380586 520380735 1.680000e-36 165.0
57 TraesCS3A01G191300 chr4B 86.000 150 19 1 3 150 147139355 147139504 7.820000e-35 159.0
58 TraesCS3A01G191300 chr2B 86.184 152 16 3 3 150 713707775 713707925 7.820000e-35 159.0
59 TraesCS3A01G191300 chr2B 95.238 42 2 0 5108 5149 660461387 660461346 4.880000e-07 67.6
60 TraesCS3A01G191300 chr7B 100.000 41 0 0 5101 5141 700420712 700420752 8.100000e-10 76.8
61 TraesCS3A01G191300 chr6D 95.238 42 2 0 5101 5142 32450390 32450349 4.880000e-07 67.6
62 TraesCS3A01G191300 chr6D 100.000 32 0 0 2246 2277 448577071 448577040 8.160000e-05 60.2
63 TraesCS3A01G191300 chr6A 93.333 45 3 0 5101 5145 36926242 36926198 4.880000e-07 67.6
64 TraesCS3A01G191300 chr4A 100.000 32 0 0 2246 2277 645108016 645107985 8.160000e-05 60.2
65 TraesCS3A01G191300 chr4A 100.000 32 0 0 2246 2277 737348778 737348747 8.160000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G191300 chr3A 243860967 243868495 7528 False 13904.000 13904 100.000000 1 7529 1 chr3A.!!$F4 7528
1 TraesCS3A01G191300 chr3D 185058106 185067361 9255 False 1337.125 4490 94.342375 3 7250 8 chr3D.!!$F3 7247
2 TraesCS3A01G191300 chr3B 263782319 263787245 4926 False 1958.000 3790 96.510500 1167 7250 4 chr3B.!!$F2 6083
3 TraesCS3A01G191300 chr2A 202052330 202052985 655 False 569.000 569 82.556000 261 916 1 chr2A.!!$F3 655
4 TraesCS3A01G191300 chr7D 629439896 629440507 611 False 473.000 473 80.744000 261 874 1 chr7D.!!$F1 613
5 TraesCS3A01G191300 chr1A 301144622 301145125 503 True 390.000 390 80.747000 261 766 1 chr1A.!!$R2 505
6 TraesCS3A01G191300 chr5B 548468182 548468744 562 False 364.000 364 78.634000 260 823 1 chr5B.!!$F2 563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
931 942 0.029700 TAATCGAATCGGCGCGAAGA 59.970 50.000 12.10 8.64 39.99 2.87 F
1509 1547 0.035458 CGTTGAGCCCTTTCTCCAGT 59.965 55.000 0.00 0.00 32.22 4.00 F
2263 4541 0.032813 ATACTCCCTCCGTCCCGAAA 60.033 55.000 0.00 0.00 0.00 3.46 F
2266 4544 1.339097 CTCCCTCCGTCCCGAAATAT 58.661 55.000 0.00 0.00 0.00 1.28 F
2731 5012 2.079925 GAAAGGCTGAAATGCTCGACT 58.920 47.619 0.00 0.00 0.00 4.18 F
2744 5025 2.094700 TGCTCGACTGCTAGTTACCTTG 60.095 50.000 0.00 0.00 0.00 3.61 F
4478 6791 2.020720 CAACAACTAACCACTGCACCA 58.979 47.619 0.00 0.00 0.00 4.17 F
4632 6946 1.559682 GTGCCTCTACCATCTTCCCAA 59.440 52.381 0.00 0.00 0.00 4.12 F
6172 8580 0.394352 GGTGGCAACCGGATCTGAAT 60.394 55.000 9.46 0.00 36.51 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1872 2794 0.243907 TGTGTTGGCTAGTCTCGAGC 59.756 55.000 7.81 2.90 39.33 5.03 R
2744 5025 0.305922 GCAACTGACAGCTGTGACAC 59.694 55.000 27.27 10.48 0.00 3.67 R
4248 6553 4.500887 CCAAGGAGGCAGCATTATTGAATG 60.501 45.833 6.73 0.00 44.62 2.67 R
4354 6659 8.894731 CATAACTAGTCTGTTCTAGCACTCTAA 58.105 37.037 0.00 0.00 40.50 2.10 R
4479 6792 0.908910 TGAGGTGTGTGTTGGACTGT 59.091 50.000 0.00 0.00 0.00 3.55 R
4483 6796 1.774254 AGGAATGAGGTGTGTGTTGGA 59.226 47.619 0.00 0.00 0.00 3.53 R
5352 7760 2.421424 AGCTTGCGGATCATCTCAAAAC 59.579 45.455 0.00 0.00 0.00 2.43 R
6357 8766 2.515757 TGCAAGCCGACAGTGCAA 60.516 55.556 0.00 0.00 44.88 4.08 R
7461 9872 0.027063 GAGAGTAGAGTCGCTGACGC 59.973 60.000 4.75 4.75 37.67 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 3.007940 ACAGTAGTCTTTAGGCATGTGCA 59.992 43.478 7.36 0.00 44.36 4.57
59 62 1.281199 TAGGCATGTGCACCCCATCT 61.281 55.000 15.69 8.09 44.36 2.90
77 80 2.269023 TCTGGACCATCTCACCAATGT 58.731 47.619 0.00 0.00 33.14 2.71
104 107 1.675483 CAACAGTACCAAGTGCAAGCA 59.325 47.619 0.00 0.00 0.00 3.91
119 122 2.588314 GCATCCTCAGAGCAGCCG 60.588 66.667 0.00 0.00 0.00 5.52
175 178 1.082117 CGTGCTTTTATCCGAGGCGT 61.082 55.000 0.00 0.00 0.00 5.68
189 192 2.320587 GGCGTTGCCTGTCACTCTG 61.321 63.158 0.00 0.00 46.69 3.35
202 205 1.829849 TCACTCTGCATGGGAGAAGAG 59.170 52.381 8.34 1.45 41.59 2.85
205 208 1.153005 CTGCATGGGAGAAGAGGGC 60.153 63.158 0.00 0.00 0.00 5.19
232 237 2.689471 TGCAAACTTGTGTTCAGAGCAT 59.311 40.909 0.00 0.00 34.96 3.79
286 291 5.659463 CAACAATCCCTTGTGAGTTTGAAA 58.341 37.500 0.00 0.00 44.83 2.69
306 311 3.766068 ATAGTCATCATGTGCCTCCAG 57.234 47.619 0.00 0.00 0.00 3.86
316 323 3.721706 GCCTCCAGTCCCCCACAG 61.722 72.222 0.00 0.00 0.00 3.66
345 353 2.634982 ACAATGGTTTGCGCATACAG 57.365 45.000 28.09 17.87 36.22 2.74
346 354 1.202114 ACAATGGTTTGCGCATACAGG 59.798 47.619 28.09 17.32 36.22 4.00
352 360 1.075542 TTTGCGCATACAGGAACGAG 58.924 50.000 12.75 0.00 0.00 4.18
355 363 0.459585 GCGCATACAGGAACGAGGAA 60.460 55.000 0.30 0.00 0.00 3.36
387 395 3.502123 TCATCCGAAAAAGTTGGGTCT 57.498 42.857 0.00 0.00 34.37 3.85
416 424 2.632996 AGTAGTTCTTGTGCAGTAGCCA 59.367 45.455 0.00 0.00 41.13 4.75
463 471 5.028802 TGATCACTCTTCTCCCTTTGATCT 58.971 41.667 9.97 0.00 39.94 2.75
471 479 4.280789 TCTCCCTTTGATCTAGCCCTTA 57.719 45.455 0.00 0.00 0.00 2.69
491 499 5.884792 CCTTAAAGTTGAGAATCTGCTCCAT 59.115 40.000 0.00 0.00 34.92 3.41
588 596 8.514594 TCTTCAATCATTTTATCAAGCTTCGTT 58.485 29.630 0.00 0.00 0.00 3.85
697 706 1.451927 CATAGAGCGCAAGGGGCAA 60.452 57.895 11.47 0.00 44.06 4.52
722 732 1.525718 TAGTTGCCGGACGTACTGCA 61.526 55.000 13.38 13.38 0.00 4.41
727 737 2.649034 CGGACGTACTGCAGTGGT 59.351 61.111 29.57 24.78 0.00 4.16
852 863 0.520404 GTGAAGCTACGAGACGTCCA 59.480 55.000 13.01 0.00 41.54 4.02
874 885 2.611518 CGCGAAGGACAAAGAAGAGAT 58.388 47.619 0.00 0.00 0.00 2.75
875 886 2.600867 CGCGAAGGACAAAGAAGAGATC 59.399 50.000 0.00 0.00 0.00 2.75
876 887 3.589988 GCGAAGGACAAAGAAGAGATCA 58.410 45.455 0.00 0.00 0.00 2.92
877 888 3.997021 GCGAAGGACAAAGAAGAGATCAA 59.003 43.478 0.00 0.00 0.00 2.57
878 889 4.452455 GCGAAGGACAAAGAAGAGATCAAA 59.548 41.667 0.00 0.00 0.00 2.69
879 890 5.123027 GCGAAGGACAAAGAAGAGATCAAAT 59.877 40.000 0.00 0.00 0.00 2.32
880 891 6.541086 CGAAGGACAAAGAAGAGATCAAATG 58.459 40.000 0.00 0.00 0.00 2.32
881 892 6.369890 CGAAGGACAAAGAAGAGATCAAATGA 59.630 38.462 0.00 0.00 0.00 2.57
882 893 7.095060 CGAAGGACAAAGAAGAGATCAAATGAA 60.095 37.037 0.00 0.00 0.00 2.57
883 894 8.647256 AAGGACAAAGAAGAGATCAAATGAAT 57.353 30.769 0.00 0.00 0.00 2.57
884 895 8.647256 AGGACAAAGAAGAGATCAAATGAATT 57.353 30.769 0.00 0.00 0.00 2.17
885 896 9.086758 AGGACAAAGAAGAGATCAAATGAATTT 57.913 29.630 0.00 0.00 0.00 1.82
886 897 9.136952 GGACAAAGAAGAGATCAAATGAATTTG 57.863 33.333 9.09 9.09 46.39 2.32
887 898 9.136952 GACAAAGAAGAGATCAAATGAATTTGG 57.863 33.333 14.19 0.00 45.39 3.28
888 899 8.645110 ACAAAGAAGAGATCAAATGAATTTGGT 58.355 29.630 14.19 8.39 45.39 3.67
891 902 8.517062 AGAAGAGATCAAATGAATTTGGTAGG 57.483 34.615 14.19 0.00 45.39 3.18
892 903 8.112183 AGAAGAGATCAAATGAATTTGGTAGGT 58.888 33.333 14.19 0.00 45.39 3.08
893 904 7.872113 AGAGATCAAATGAATTTGGTAGGTC 57.128 36.000 14.19 6.65 45.39 3.85
894 905 7.405292 AGAGATCAAATGAATTTGGTAGGTCA 58.595 34.615 14.19 0.00 45.39 4.02
895 906 7.890127 AGAGATCAAATGAATTTGGTAGGTCAA 59.110 33.333 14.19 0.00 45.39 3.18
896 907 8.421249 AGATCAAATGAATTTGGTAGGTCAAA 57.579 30.769 14.19 0.00 45.39 2.69
897 908 9.039165 AGATCAAATGAATTTGGTAGGTCAAAT 57.961 29.630 14.19 0.00 45.86 2.32
905 916 6.933514 ATTTGGTAGGTCAAATTGGTGAAT 57.066 33.333 0.00 0.00 42.63 2.57
906 917 6.739331 TTTGGTAGGTCAAATTGGTGAATT 57.261 33.333 0.00 0.00 32.39 2.17
907 918 6.739331 TTGGTAGGTCAAATTGGTGAATTT 57.261 33.333 0.00 0.00 41.58 1.82
926 937 3.929095 GATGTAATCGAATCGGCGC 57.071 52.632 0.00 0.00 31.13 6.53
927 938 0.091344 GATGTAATCGAATCGGCGCG 59.909 55.000 0.00 0.00 31.13 6.86
928 939 0.318360 ATGTAATCGAATCGGCGCGA 60.318 50.000 12.10 10.28 41.13 5.87
929 940 0.525882 TGTAATCGAATCGGCGCGAA 60.526 50.000 12.10 0.00 39.99 4.70
930 941 0.158928 GTAATCGAATCGGCGCGAAG 59.841 55.000 12.10 1.64 39.99 3.79
931 942 0.029700 TAATCGAATCGGCGCGAAGA 59.970 50.000 12.10 8.64 39.99 2.87
932 943 0.804544 AATCGAATCGGCGCGAAGAA 60.805 50.000 12.10 0.00 39.99 2.52
933 944 1.480219 ATCGAATCGGCGCGAAGAAC 61.480 55.000 12.10 6.06 39.99 3.01
934 945 2.441378 CGAATCGGCGCGAAGAACA 61.441 57.895 12.10 0.00 39.99 3.18
935 946 1.785321 GAATCGGCGCGAAGAACAA 59.215 52.632 12.10 0.00 39.99 2.83
936 947 0.165079 GAATCGGCGCGAAGAACAAA 59.835 50.000 12.10 0.00 39.99 2.83
937 948 0.165944 AATCGGCGCGAAGAACAAAG 59.834 50.000 12.10 0.00 39.99 2.77
938 949 0.669318 ATCGGCGCGAAGAACAAAGA 60.669 50.000 12.10 0.00 39.99 2.52
1007 1038 9.612620 GTAATCGAATCCAATCAAATACAATCC 57.387 33.333 0.00 0.00 0.00 3.01
1023 1054 4.721132 ACAATCCTTTTGAGACCCGTTTA 58.279 39.130 0.00 0.00 0.00 2.01
1026 1057 3.999046 TCCTTTTGAGACCCGTTTAGTC 58.001 45.455 0.00 0.00 34.31 2.59
1029 1060 4.377897 CTTTTGAGACCCGTTTAGTCACT 58.622 43.478 0.00 0.00 36.68 3.41
1031 1062 4.510038 TTGAGACCCGTTTAGTCACTAC 57.490 45.455 0.00 0.00 36.68 2.73
1032 1063 3.759581 TGAGACCCGTTTAGTCACTACT 58.240 45.455 0.00 0.00 39.91 2.57
1033 1064 3.504906 TGAGACCCGTTTAGTCACTACTG 59.495 47.826 0.00 0.00 36.36 2.74
1034 1065 3.494332 AGACCCGTTTAGTCACTACTGT 58.506 45.455 0.00 0.00 36.36 3.55
1035 1066 3.505293 AGACCCGTTTAGTCACTACTGTC 59.495 47.826 0.00 0.00 36.36 3.51
1036 1067 2.560105 ACCCGTTTAGTCACTACTGTCC 59.440 50.000 0.00 0.00 36.36 4.02
1037 1068 2.094338 CCCGTTTAGTCACTACTGTCCC 60.094 54.545 0.00 0.00 36.36 4.46
1038 1069 2.559668 CCGTTTAGTCACTACTGTCCCA 59.440 50.000 0.00 0.00 36.36 4.37
1039 1070 3.194968 CCGTTTAGTCACTACTGTCCCAT 59.805 47.826 0.00 0.00 36.36 4.00
1040 1071 4.400251 CCGTTTAGTCACTACTGTCCCATA 59.600 45.833 0.00 0.00 36.36 2.74
1041 1072 5.105635 CCGTTTAGTCACTACTGTCCCATAA 60.106 44.000 0.00 0.00 36.36 1.90
1042 1073 5.803967 CGTTTAGTCACTACTGTCCCATAAC 59.196 44.000 0.00 0.00 36.36 1.89
1043 1074 6.349944 CGTTTAGTCACTACTGTCCCATAACT 60.350 42.308 0.00 0.00 36.36 2.24
1044 1075 7.384477 GTTTAGTCACTACTGTCCCATAACTT 58.616 38.462 0.00 0.00 36.36 2.66
1045 1076 7.549147 TTAGTCACTACTGTCCCATAACTTT 57.451 36.000 0.00 0.00 36.36 2.66
1046 1077 6.435292 AGTCACTACTGTCCCATAACTTTT 57.565 37.500 0.00 0.00 33.57 2.27
1047 1078 6.838382 AGTCACTACTGTCCCATAACTTTTT 58.162 36.000 0.00 0.00 33.57 1.94
1048 1079 7.970102 AGTCACTACTGTCCCATAACTTTTTA 58.030 34.615 0.00 0.00 33.57 1.52
1049 1080 8.434392 AGTCACTACTGTCCCATAACTTTTTAA 58.566 33.333 0.00 0.00 33.57 1.52
1050 1081 9.059260 GTCACTACTGTCCCATAACTTTTTAAA 57.941 33.333 0.00 0.00 0.00 1.52
1051 1082 9.059260 TCACTACTGTCCCATAACTTTTTAAAC 57.941 33.333 0.00 0.00 0.00 2.01
1052 1083 8.842280 CACTACTGTCCCATAACTTTTTAAACA 58.158 33.333 0.00 0.00 0.00 2.83
1053 1084 8.843262 ACTACTGTCCCATAACTTTTTAAACAC 58.157 33.333 0.00 0.00 0.00 3.32
1054 1085 7.648039 ACTGTCCCATAACTTTTTAAACACA 57.352 32.000 0.00 0.00 0.00 3.72
1055 1086 8.068892 ACTGTCCCATAACTTTTTAAACACAA 57.931 30.769 0.00 0.00 0.00 3.33
1056 1087 8.700973 ACTGTCCCATAACTTTTTAAACACAAT 58.299 29.630 0.00 0.00 0.00 2.71
1058 1089 9.968870 TGTCCCATAACTTTTTAAACACAATAC 57.031 29.630 0.00 0.00 0.00 1.89
1059 1090 9.968870 GTCCCATAACTTTTTAAACACAATACA 57.031 29.630 0.00 0.00 0.00 2.29
1065 1096 7.813852 ACTTTTTAAACACAATACAAACGCA 57.186 28.000 0.00 0.00 0.00 5.24
1066 1097 8.240883 ACTTTTTAAACACAATACAAACGCAA 57.759 26.923 0.00 0.00 0.00 4.85
1068 1099 5.874892 TTAAACACAATACAAACGCAAGC 57.125 34.783 0.00 0.00 45.62 4.01
1069 1100 2.031037 ACACAATACAAACGCAAGCG 57.969 45.000 13.50 13.50 46.03 4.68
1070 1101 0.702383 CACAATACAAACGCAAGCGC 59.298 50.000 15.09 0.00 44.19 5.92
1071 1102 0.591170 ACAATACAAACGCAAGCGCT 59.409 45.000 15.09 2.64 44.19 5.92
1072 1103 1.801771 ACAATACAAACGCAAGCGCTA 59.198 42.857 12.05 0.00 44.19 4.26
1073 1104 2.224549 ACAATACAAACGCAAGCGCTAA 59.775 40.909 12.05 0.00 44.19 3.09
1074 1105 3.119990 ACAATACAAACGCAAGCGCTAAT 60.120 39.130 12.05 0.00 44.19 1.73
1075 1106 4.093703 ACAATACAAACGCAAGCGCTAATA 59.906 37.500 12.05 3.14 44.19 0.98
1076 1107 5.204833 CAATACAAACGCAAGCGCTAATAT 58.795 37.500 12.05 5.35 44.19 1.28
1077 1108 6.018588 ACAATACAAACGCAAGCGCTAATATA 60.019 34.615 12.05 0.00 44.19 0.86
1078 1109 4.191662 ACAAACGCAAGCGCTAATATAC 57.808 40.909 12.05 0.00 44.19 1.47
1079 1110 3.001939 ACAAACGCAAGCGCTAATATACC 59.998 43.478 12.05 0.00 44.19 2.73
1080 1111 1.792006 ACGCAAGCGCTAATATACCC 58.208 50.000 12.05 0.00 44.19 3.69
1081 1112 1.069513 ACGCAAGCGCTAATATACCCA 59.930 47.619 12.05 0.00 44.19 4.51
1082 1113 1.459592 CGCAAGCGCTAATATACCCAC 59.540 52.381 12.05 0.00 35.30 4.61
1083 1114 2.489971 GCAAGCGCTAATATACCCACA 58.510 47.619 12.05 0.00 34.30 4.17
1084 1115 2.223377 GCAAGCGCTAATATACCCACAC 59.777 50.000 12.05 0.00 34.30 3.82
1085 1116 3.728845 CAAGCGCTAATATACCCACACT 58.271 45.455 12.05 0.00 0.00 3.55
1086 1117 4.798263 GCAAGCGCTAATATACCCACACTA 60.798 45.833 12.05 0.00 34.30 2.74
1087 1118 4.785511 AGCGCTAATATACCCACACTAG 57.214 45.455 8.99 0.00 0.00 2.57
1088 1119 4.150359 AGCGCTAATATACCCACACTAGT 58.850 43.478 8.99 0.00 0.00 2.57
1089 1120 5.319453 AGCGCTAATATACCCACACTAGTA 58.681 41.667 8.99 0.00 0.00 1.82
1090 1121 5.182760 AGCGCTAATATACCCACACTAGTAC 59.817 44.000 8.99 0.00 0.00 2.73
1091 1122 5.182760 GCGCTAATATACCCACACTAGTACT 59.817 44.000 0.00 0.00 0.00 2.73
1092 1123 6.609533 CGCTAATATACCCACACTAGTACTG 58.390 44.000 5.39 0.00 0.00 2.74
1093 1124 6.206243 CGCTAATATACCCACACTAGTACTGT 59.794 42.308 5.39 0.00 0.00 3.55
1094 1125 7.572724 CGCTAATATACCCACACTAGTACTGTC 60.573 44.444 5.39 0.00 0.00 3.51
1095 1126 7.230108 GCTAATATACCCACACTAGTACTGTCA 59.770 40.741 5.39 0.00 0.00 3.58
1096 1127 9.298250 CTAATATACCCACACTAGTACTGTCAT 57.702 37.037 5.39 0.00 0.00 3.06
1097 1128 7.762588 ATATACCCACACTAGTACTGTCATC 57.237 40.000 5.39 0.00 0.00 2.92
1098 1129 4.048970 ACCCACACTAGTACTGTCATCT 57.951 45.455 5.39 0.00 0.00 2.90
1099 1130 4.417437 ACCCACACTAGTACTGTCATCTT 58.583 43.478 5.39 0.00 0.00 2.40
1106 1137 7.274468 CACACTAGTACTGTCATCTTGTCATTC 59.726 40.741 5.39 0.00 0.00 2.67
1133 1164 2.593956 GGTTTGGGGGAGAGACGCT 61.594 63.158 0.00 0.00 0.00 5.07
1266 1302 2.017049 CCAGATTCGTTTGATCCCCAC 58.983 52.381 0.00 0.00 0.00 4.61
1342 1379 1.153147 GGATTTCTCAGGCGGGGAC 60.153 63.158 0.00 0.00 0.00 4.46
1481 1519 3.781307 CCCGATCCTCCACCGCAA 61.781 66.667 0.00 0.00 0.00 4.85
1482 1520 2.511600 CCGATCCTCCACCGCAAC 60.512 66.667 0.00 0.00 0.00 4.17
1483 1521 2.579201 CGATCCTCCACCGCAACT 59.421 61.111 0.00 0.00 0.00 3.16
1484 1522 1.811266 CGATCCTCCACCGCAACTG 60.811 63.158 0.00 0.00 0.00 3.16
1485 1523 2.045926 ATCCTCCACCGCAACTGC 60.046 61.111 0.00 0.00 37.78 4.40
1486 1524 2.803155 GATCCTCCACCGCAACTGCA 62.803 60.000 2.12 0.00 42.21 4.41
1487 1525 3.357079 CCTCCACCGCAACTGCAC 61.357 66.667 2.12 0.00 42.21 4.57
1488 1526 3.716006 CTCCACCGCAACTGCACG 61.716 66.667 2.12 0.00 42.21 5.34
1495 1533 3.947841 GCAACTGCACGCCGTTGA 61.948 61.111 24.63 0.00 42.24 3.18
1496 1534 2.249309 CAACTGCACGCCGTTGAG 59.751 61.111 18.09 0.00 42.24 3.02
1497 1535 3.649986 AACTGCACGCCGTTGAGC 61.650 61.111 0.00 0.00 0.00 4.26
1502 1540 2.978010 CACGCCGTTGAGCCCTTT 60.978 61.111 0.00 0.00 0.00 3.11
1503 1541 2.668550 ACGCCGTTGAGCCCTTTC 60.669 61.111 0.00 0.00 0.00 2.62
1504 1542 2.358737 CGCCGTTGAGCCCTTTCT 60.359 61.111 0.00 0.00 0.00 2.52
1505 1543 2.391389 CGCCGTTGAGCCCTTTCTC 61.391 63.158 0.00 0.00 0.00 2.87
1506 1544 2.041115 GCCGTTGAGCCCTTTCTCC 61.041 63.158 0.00 0.00 32.22 3.71
1507 1545 1.374947 CCGTTGAGCCCTTTCTCCA 59.625 57.895 0.00 0.00 32.22 3.86
1508 1546 0.674895 CCGTTGAGCCCTTTCTCCAG 60.675 60.000 0.00 0.00 32.22 3.86
1509 1547 0.035458 CGTTGAGCCCTTTCTCCAGT 59.965 55.000 0.00 0.00 32.22 4.00
1516 1554 1.831736 GCCCTTTCTCCAGTACTGCTA 59.168 52.381 17.86 6.66 0.00 3.49
1662 1701 2.060980 CGGCTCCTACCTTGCTCCT 61.061 63.158 0.00 0.00 0.00 3.69
1663 1702 1.826709 GGCTCCTACCTTGCTCCTC 59.173 63.158 0.00 0.00 0.00 3.71
1664 1703 0.689412 GGCTCCTACCTTGCTCCTCT 60.689 60.000 0.00 0.00 0.00 3.69
1665 1704 0.463620 GCTCCTACCTTGCTCCTCTG 59.536 60.000 0.00 0.00 0.00 3.35
1775 1825 1.406887 GGTCGCCCATTTTCTCTGCTA 60.407 52.381 0.00 0.00 0.00 3.49
1776 1826 2.356135 GTCGCCCATTTTCTCTGCTAA 58.644 47.619 0.00 0.00 0.00 3.09
1862 2784 5.499176 CGAGAAAACACAAAAAGCTTTGAGC 60.499 40.000 13.54 0.00 44.03 4.26
1881 2803 3.701532 GCTATGTACAAGCTCGAGACT 57.298 47.619 18.75 10.18 37.01 3.24
1891 2813 0.243907 GCTCGAGACTAGCCAACACA 59.756 55.000 18.75 0.00 33.73 3.72
1916 2908 3.955771 TTTACAACGTGAGAGCAAACC 57.044 42.857 0.00 0.00 0.00 3.27
1931 2923 4.740822 ACCGGGATGTTGGGCTGC 62.741 66.667 6.32 0.00 0.00 5.25
1942 2934 4.090057 GGGCTGCGCTTTGTCGAC 62.090 66.667 9.73 9.11 0.00 4.20
2023 3015 0.539051 GCCTACTGTCACCAGCTGAT 59.461 55.000 17.39 0.00 42.81 2.90
2024 3016 1.472376 GCCTACTGTCACCAGCTGATC 60.472 57.143 17.39 2.92 42.81 2.92
2070 3062 2.437281 CTGGCTGTAGATTGGATCCACT 59.563 50.000 15.91 9.69 0.00 4.00
2071 3063 3.643320 CTGGCTGTAGATTGGATCCACTA 59.357 47.826 15.91 11.06 0.00 2.74
2095 3087 9.209175 CTAAAGATGCTCTGGTAACCATATAAC 57.791 37.037 0.00 0.00 30.82 1.89
2131 3123 6.020041 CGATCATGTAGTCACTGTCTTCAATG 60.020 42.308 0.00 0.00 0.00 2.82
2138 3130 2.543848 TCACTGTCTTCAATGACGCAAC 59.456 45.455 0.00 0.00 39.64 4.17
2139 3131 1.526887 ACTGTCTTCAATGACGCAACG 59.473 47.619 0.00 0.00 39.64 4.10
2168 3160 4.559153 ACAGGCAATATTGACTTTTGCAC 58.441 39.130 21.63 0.00 46.60 4.57
2179 4457 3.181495 TGACTTTTGCACGTCGGAAAAAT 60.181 39.130 14.52 8.03 43.35 1.82
2254 4532 7.741554 ATCAAGGATAACATATACTCCCTCC 57.258 40.000 0.00 0.00 0.00 4.30
2255 4533 5.715279 TCAAGGATAACATATACTCCCTCCG 59.285 44.000 0.00 0.00 0.00 4.63
2256 4534 5.272405 AGGATAACATATACTCCCTCCGT 57.728 43.478 0.00 0.00 0.00 4.69
2257 4535 5.262804 AGGATAACATATACTCCCTCCGTC 58.737 45.833 0.00 0.00 0.00 4.79
2258 4536 4.401837 GGATAACATATACTCCCTCCGTCC 59.598 50.000 0.00 0.00 0.00 4.79
2259 4537 2.305858 ACATATACTCCCTCCGTCCC 57.694 55.000 0.00 0.00 0.00 4.46
2260 4538 1.174783 CATATACTCCCTCCGTCCCG 58.825 60.000 0.00 0.00 0.00 5.14
2261 4539 1.070604 ATATACTCCCTCCGTCCCGA 58.929 55.000 0.00 0.00 0.00 5.14
2262 4540 0.846015 TATACTCCCTCCGTCCCGAA 59.154 55.000 0.00 0.00 0.00 4.30
2263 4541 0.032813 ATACTCCCTCCGTCCCGAAA 60.033 55.000 0.00 0.00 0.00 3.46
2264 4542 0.032813 TACTCCCTCCGTCCCGAAAT 60.033 55.000 0.00 0.00 0.00 2.17
2265 4543 0.032813 ACTCCCTCCGTCCCGAAATA 60.033 55.000 0.00 0.00 0.00 1.40
2266 4544 1.339097 CTCCCTCCGTCCCGAAATAT 58.661 55.000 0.00 0.00 0.00 1.28
2267 4545 2.158415 ACTCCCTCCGTCCCGAAATATA 60.158 50.000 0.00 0.00 0.00 0.86
2268 4546 2.895404 CTCCCTCCGTCCCGAAATATAA 59.105 50.000 0.00 0.00 0.00 0.98
2269 4547 2.895404 TCCCTCCGTCCCGAAATATAAG 59.105 50.000 0.00 0.00 0.00 1.73
2270 4548 2.895404 CCCTCCGTCCCGAAATATAAGA 59.105 50.000 0.00 0.00 0.00 2.10
2271 4549 3.322828 CCCTCCGTCCCGAAATATAAGAA 59.677 47.826 0.00 0.00 0.00 2.52
2272 4550 4.304939 CCTCCGTCCCGAAATATAAGAAC 58.695 47.826 0.00 0.00 0.00 3.01
2273 4551 3.968649 TCCGTCCCGAAATATAAGAACG 58.031 45.455 0.00 0.00 0.00 3.95
2274 4552 3.381272 TCCGTCCCGAAATATAAGAACGT 59.619 43.478 0.00 0.00 0.00 3.99
2275 4553 4.114794 CCGTCCCGAAATATAAGAACGTT 58.885 43.478 0.00 0.00 0.00 3.99
2276 4554 4.567959 CCGTCCCGAAATATAAGAACGTTT 59.432 41.667 0.46 0.00 0.00 3.60
2277 4555 5.748152 CCGTCCCGAAATATAAGAACGTTTA 59.252 40.000 0.46 0.00 0.00 2.01
2278 4556 6.074676 CCGTCCCGAAATATAAGAACGTTTAG 60.075 42.308 0.46 0.00 0.00 1.85
2279 4557 6.473455 CGTCCCGAAATATAAGAACGTTTAGT 59.527 38.462 0.46 0.00 0.00 2.24
2280 4558 7.643764 CGTCCCGAAATATAAGAACGTTTAGTA 59.356 37.037 0.46 0.00 0.00 1.82
2281 4559 8.746751 GTCCCGAAATATAAGAACGTTTAGTAC 58.253 37.037 0.46 0.00 0.00 2.73
2282 4560 8.686334 TCCCGAAATATAAGAACGTTTAGTACT 58.314 33.333 0.46 0.00 0.00 2.73
2283 4561 9.305925 CCCGAAATATAAGAACGTTTAGTACTT 57.694 33.333 0.46 3.20 0.00 2.24
2304 4582 6.970484 ACTTTAGAAGTTAGCAATGGTTGTG 58.030 36.000 0.00 0.00 39.04 3.33
2321 4599 3.431673 TGTGTCTAACATGGCAATGGA 57.568 42.857 5.94 0.00 38.19 3.41
2427 4706 3.181483 GCCCTAGTTTCATGCCAATCAAG 60.181 47.826 0.00 0.00 0.00 3.02
2456 4735 6.878317 AGCTGCTAGTATCATTGTCAACTTA 58.122 36.000 0.00 0.00 0.00 2.24
2457 4736 6.983307 AGCTGCTAGTATCATTGTCAACTTAG 59.017 38.462 0.00 0.00 0.00 2.18
2458 4737 6.980978 GCTGCTAGTATCATTGTCAACTTAGA 59.019 38.462 0.00 0.00 0.00 2.10
2482 4761 2.297701 ACACACACCTGCTAAACCAAG 58.702 47.619 0.00 0.00 0.00 3.61
2507 4786 7.893302 AGGAGTTGATACCATGTTCCATTTTTA 59.107 33.333 0.00 0.00 0.00 1.52
2564 4843 4.755123 TCGACCTTTTTCATCTGAACCTTC 59.245 41.667 0.00 0.00 33.13 3.46
2585 4864 8.592809 ACCTTCTATTTTATTTGGTTGCATGAA 58.407 29.630 0.00 0.00 0.00 2.57
2699 4980 5.880901 TCTCCTTTGATACCTTTTCTTGCT 58.119 37.500 0.00 0.00 0.00 3.91
2731 5012 2.079925 GAAAGGCTGAAATGCTCGACT 58.920 47.619 0.00 0.00 0.00 4.18
2744 5025 2.094700 TGCTCGACTGCTAGTTACCTTG 60.095 50.000 0.00 0.00 0.00 3.61
2803 5084 2.475111 ACACTGATGTTCGTGCGTTTAG 59.525 45.455 0.00 0.00 34.46 1.85
2860 5141 7.390027 ACTTCGTACACTAAGGACTAGAGTTA 58.610 38.462 0.00 0.00 33.90 2.24
3253 5535 6.710744 CCTGTGTACTTTTATGAGGTTCTGTT 59.289 38.462 0.00 0.00 0.00 3.16
3514 5796 7.716799 AACTTTGGGCATATGATAGAAAACA 57.283 32.000 6.97 0.00 0.00 2.83
3980 6263 5.049167 TGTTGAAAAGCATTTGACATGGTC 58.951 37.500 0.00 0.00 39.02 4.02
3981 6264 5.163426 TGTTGAAAAGCATTTGACATGGTCT 60.163 36.000 0.00 0.00 39.02 3.85
3982 6265 5.534207 TGAAAAGCATTTGACATGGTCTT 57.466 34.783 0.00 0.00 39.02 3.01
3983 6266 5.291178 TGAAAAGCATTTGACATGGTCTTG 58.709 37.500 0.00 0.00 39.02 3.02
3984 6267 3.947910 AAGCATTTGACATGGTCTTGG 57.052 42.857 0.00 0.00 33.15 3.61
3985 6268 2.880443 AGCATTTGACATGGTCTTGGT 58.120 42.857 0.00 0.00 33.15 3.67
3986 6269 4.032960 AGCATTTGACATGGTCTTGGTA 57.967 40.909 0.00 0.00 33.15 3.25
3987 6270 4.012374 AGCATTTGACATGGTCTTGGTAG 58.988 43.478 0.00 0.00 33.15 3.18
3988 6271 4.009675 GCATTTGACATGGTCTTGGTAGA 58.990 43.478 0.00 0.00 33.15 2.59
4026 6318 3.430453 TCGAGATTGCCCCTTTTCAATT 58.570 40.909 0.00 0.00 33.49 2.32
4171 6463 4.190772 CAATTTTTGTTTGTCAGGGCAGT 58.809 39.130 0.00 0.00 0.00 4.40
4204 6496 7.177744 TGAATTAGGTTCCACTAAAACATTCCC 59.822 37.037 0.00 0.00 36.60 3.97
4237 6542 5.185635 TGGAATTTGCTGAATACAAGGAAGG 59.814 40.000 0.00 0.00 0.00 3.46
4248 6553 8.117813 TGAATACAAGGAAGGGTTATTGTTTC 57.882 34.615 0.00 0.00 37.15 2.78
4260 6565 8.947055 AGGGTTATTGTTTCATTCAATAATGC 57.053 30.769 12.14 3.73 44.19 3.56
4402 6707 9.593134 TTATGTTTTGTTACTTCAGTTGCATTT 57.407 25.926 0.00 0.00 0.00 2.32
4478 6791 2.020720 CAACAACTAACCACTGCACCA 58.979 47.619 0.00 0.00 0.00 4.17
4479 6792 2.425312 CAACAACTAACCACTGCACCAA 59.575 45.455 0.00 0.00 0.00 3.67
4480 6793 2.021457 ACAACTAACCACTGCACCAAC 58.979 47.619 0.00 0.00 0.00 3.77
4481 6794 2.020720 CAACTAACCACTGCACCAACA 58.979 47.619 0.00 0.00 0.00 3.33
4482 6795 1.967319 ACTAACCACTGCACCAACAG 58.033 50.000 0.00 0.00 43.59 3.16
4632 6946 1.559682 GTGCCTCTACCATCTTCCCAA 59.440 52.381 0.00 0.00 0.00 4.12
4898 7216 7.599245 CGAATAGTACTGGAAAAGTGAGAAAGT 59.401 37.037 5.39 0.00 40.26 2.66
5017 7335 6.971184 GGAAAGATGTTGCTGATTACTGATTG 59.029 38.462 0.00 0.00 0.00 2.67
5047 7365 7.041372 ACAATTTGTCGCTGATTTAGTACAACT 60.041 33.333 0.00 0.00 35.53 3.16
5074 7397 7.178712 ACTAAATCAGCGACAACTAATATGC 57.821 36.000 0.00 0.00 0.00 3.14
5085 7408 4.167892 ACAACTAATATGCAATGGAGGGGA 59.832 41.667 0.00 0.00 0.00 4.81
5315 7723 3.255725 CGGCAACTAAACCGTCAATCTA 58.744 45.455 0.00 0.00 44.46 1.98
5350 7758 2.959465 CTCCTTGGTGGGAGTTCTTT 57.041 50.000 2.65 0.00 45.65 2.52
5351 7759 2.508526 CTCCTTGGTGGGAGTTCTTTG 58.491 52.381 2.65 0.00 45.65 2.77
5352 7760 1.144913 TCCTTGGTGGGAGTTCTTTGG 59.855 52.381 0.00 0.00 36.20 3.28
5451 7859 2.100605 AGTAAAGAAGCTTCTGCCCG 57.899 50.000 29.09 0.00 40.80 6.13
5539 7947 0.693049 TTTCCCTTGACCTCCAGCTC 59.307 55.000 0.00 0.00 0.00 4.09
5626 8034 1.230281 AGCTTTCCCTGGATCCCCA 60.230 57.895 9.90 0.00 40.95 4.96
5698 8106 3.826729 GCAGAAACATGGTTAAGAAGGGT 59.173 43.478 0.00 0.00 0.00 4.34
5713 8121 2.426842 AGGGTGCTCTTTTGGATAGC 57.573 50.000 0.00 0.00 36.77 2.97
6172 8580 0.394352 GGTGGCAACCGGATCTGAAT 60.394 55.000 9.46 0.00 36.51 2.57
6370 8779 2.401583 TTATGATTGCACTGTCGGCT 57.598 45.000 0.00 0.00 0.00 5.52
6711 9122 4.525912 AACCTTCATGATTGTTTCAGCC 57.474 40.909 0.00 0.00 37.89 4.85
6836 9247 6.192044 TCACTTTATGATAAGGGGAAAACCC 58.808 40.000 0.00 0.00 46.68 4.11
6845 9256 1.002502 GGGAAAACCCAGGAGACCG 60.003 63.158 0.00 0.00 36.34 4.79
6846 9257 1.002502 GGAAAACCCAGGAGACCGG 60.003 63.158 0.00 0.00 34.14 5.28
6862 9273 3.000727 GACCGGTGGTATTTCTCTGTTG 58.999 50.000 14.63 0.00 35.25 3.33
6864 9275 2.615493 CCGGTGGTATTTCTCTGTTGCT 60.615 50.000 0.00 0.00 0.00 3.91
6866 9277 3.412386 GGTGGTATTTCTCTGTTGCTGT 58.588 45.455 0.00 0.00 0.00 4.40
6901 9312 1.209275 GCTTCCATGTCGTCGATCCG 61.209 60.000 0.00 0.00 0.00 4.18
6938 9349 3.832615 ACAACCCGACAGAAAGTAGTT 57.167 42.857 0.00 0.00 0.00 2.24
6939 9350 4.146745 ACAACCCGACAGAAAGTAGTTT 57.853 40.909 0.00 0.00 0.00 2.66
6948 9359 3.563808 ACAGAAAGTAGTTTGCGCATGAA 59.436 39.130 12.75 0.00 0.00 2.57
6987 9398 3.980646 TCTGTTTTGGTGAAATGTCGG 57.019 42.857 0.00 0.00 0.00 4.79
6988 9399 3.283751 TCTGTTTTGGTGAAATGTCGGT 58.716 40.909 0.00 0.00 0.00 4.69
7010 9421 2.440409 GACCAACCTGTGATCTTGCAT 58.560 47.619 0.00 0.00 0.00 3.96
7077 9488 4.944619 AGAGAACATATCATCTTCGGCA 57.055 40.909 0.00 0.00 0.00 5.69
7088 9499 3.817084 TCATCTTCGGCATCCATGATTTC 59.183 43.478 0.00 0.00 0.00 2.17
7092 9503 3.836365 TCGGCATCCATGATTTCACTA 57.164 42.857 0.00 0.00 0.00 2.74
7095 9506 4.067192 CGGCATCCATGATTTCACTATCA 58.933 43.478 0.00 0.00 38.78 2.15
7096 9507 4.516321 CGGCATCCATGATTTCACTATCAA 59.484 41.667 0.00 0.00 38.01 2.57
7128 9539 6.057533 AGCTCGAATCCAATGATGAATTGTA 58.942 36.000 0.00 0.00 43.66 2.41
7146 9557 9.719355 TGAATTGTACAAAAATAGCTCTACTGA 57.281 29.630 13.23 0.00 0.00 3.41
7231 9642 5.651172 AAATTTACAAGAAAAGTTGGCGC 57.349 34.783 0.00 0.00 0.00 6.53
7250 9661 1.070289 GCAATCTACCTCGGGGTAAGG 59.930 57.143 16.67 4.90 46.24 2.69
7251 9662 1.070289 CAATCTACCTCGGGGTAAGGC 59.930 57.143 16.67 0.00 46.24 4.35
7252 9663 0.471401 ATCTACCTCGGGGTAAGGCC 60.471 60.000 16.67 0.00 46.24 5.19
7253 9664 1.382146 CTACCTCGGGGTAAGGCCA 60.382 63.158 16.67 0.00 46.24 5.36
7254 9665 0.763223 CTACCTCGGGGTAAGGCCAT 60.763 60.000 16.67 0.00 46.24 4.40
7255 9666 0.761702 TACCTCGGGGTAAGGCCATC 60.762 60.000 13.10 0.00 45.32 3.51
7256 9667 1.766461 CCTCGGGGTAAGGCCATCT 60.766 63.158 5.01 0.00 39.65 2.90
7257 9668 1.749033 CTCGGGGTAAGGCCATCTC 59.251 63.158 5.01 0.00 39.65 2.75
7258 9669 1.759459 CTCGGGGTAAGGCCATCTCC 61.759 65.000 5.01 2.69 39.65 3.71
7259 9670 2.070039 CGGGGTAAGGCCATCTCCA 61.070 63.158 5.01 0.00 39.65 3.86
7260 9671 1.839894 GGGGTAAGGCCATCTCCAG 59.160 63.158 5.01 0.00 39.65 3.86
7261 9672 1.149401 GGGTAAGGCCATCTCCAGC 59.851 63.158 5.01 0.00 39.65 4.85
7282 9693 4.448976 GCCCCCAAGAAGGCCCTC 62.449 72.222 0.00 0.00 43.76 4.30
7283 9694 3.744155 CCCCCAAGAAGGCCCTCC 61.744 72.222 0.00 0.00 35.39 4.30
7284 9695 2.941025 CCCCAAGAAGGCCCTCCA 60.941 66.667 0.00 0.00 35.39 3.86
7285 9696 2.679716 CCCAAGAAGGCCCTCCAG 59.320 66.667 0.00 0.00 35.39 3.86
7286 9697 2.679716 CCAAGAAGGCCCTCCAGG 59.320 66.667 0.00 0.00 39.47 4.45
7307 9718 2.328639 TTTTTCGTTCGCCGGCAC 59.671 55.556 28.98 17.44 37.11 5.01
7308 9719 3.183776 TTTTTCGTTCGCCGGCACC 62.184 57.895 28.98 12.24 37.11 5.01
7309 9720 4.912485 TTTCGTTCGCCGGCACCA 62.912 61.111 28.98 6.41 37.11 4.17
7310 9721 4.912485 TTCGTTCGCCGGCACCAA 62.912 61.111 28.98 13.06 37.11 3.67
7311 9722 4.912485 TCGTTCGCCGGCACCAAA 62.912 61.111 28.98 11.88 37.11 3.28
7312 9723 3.955101 CGTTCGCCGGCACCAAAA 61.955 61.111 28.98 9.16 0.00 2.44
7313 9724 2.413765 GTTCGCCGGCACCAAAAA 59.586 55.556 28.98 7.25 0.00 1.94
7327 9738 3.274067 AAAAATCGGCCCAGTCGC 58.726 55.556 0.00 0.00 0.00 5.19
7328 9739 2.686816 AAAAATCGGCCCAGTCGCG 61.687 57.895 0.00 0.00 0.00 5.87
7344 9755 4.447342 CGCCCCCAAGAGCCCAAT 62.447 66.667 0.00 0.00 0.00 3.16
7345 9756 2.039462 GCCCCCAAGAGCCCAATT 59.961 61.111 0.00 0.00 0.00 2.32
7346 9757 1.613332 GCCCCCAAGAGCCCAATTT 60.613 57.895 0.00 0.00 0.00 1.82
7347 9758 1.200760 GCCCCCAAGAGCCCAATTTT 61.201 55.000 0.00 0.00 0.00 1.82
7348 9759 0.904649 CCCCCAAGAGCCCAATTTTC 59.095 55.000 0.00 0.00 0.00 2.29
7349 9760 0.532115 CCCCAAGAGCCCAATTTTCG 59.468 55.000 0.00 0.00 0.00 3.46
7350 9761 0.108662 CCCAAGAGCCCAATTTTCGC 60.109 55.000 0.00 0.00 0.00 4.70
7351 9762 0.108662 CCAAGAGCCCAATTTTCGCC 60.109 55.000 0.00 0.00 0.00 5.54
7352 9763 0.456653 CAAGAGCCCAATTTTCGCCG 60.457 55.000 0.00 0.00 0.00 6.46
7353 9764 1.595093 AAGAGCCCAATTTTCGCCGG 61.595 55.000 0.00 0.00 0.00 6.13
7354 9765 3.699955 GAGCCCAATTTTCGCCGGC 62.700 63.158 19.07 19.07 40.03 6.13
7355 9766 3.758931 GCCCAATTTTCGCCGGCT 61.759 61.111 26.68 0.86 36.65 5.52
7356 9767 2.489751 CCCAATTTTCGCCGGCTC 59.510 61.111 26.68 0.00 0.00 4.70
7357 9768 2.100216 CCAATTTTCGCCGGCTCG 59.900 61.111 26.68 10.37 0.00 5.03
7394 9805 4.710167 GGACCCAACCCGAACCCG 62.710 72.222 0.00 0.00 0.00 5.28
7436 9847 2.564458 GCCGGGCGAATCGTTTTT 59.436 55.556 1.81 0.00 0.00 1.94
7437 9848 1.799916 GCCGGGCGAATCGTTTTTG 60.800 57.895 1.81 0.00 0.00 2.44
7438 9849 1.154112 CCGGGCGAATCGTTTTTGG 60.154 57.895 4.07 0.00 0.00 3.28
7439 9850 1.799916 CGGGCGAATCGTTTTTGGC 60.800 57.895 4.07 6.24 0.00 4.52
7440 9851 1.799916 GGGCGAATCGTTTTTGGCG 60.800 57.895 4.07 0.00 31.83 5.69
7441 9852 2.433334 GGCGAATCGTTTTTGGCGC 61.433 57.895 4.07 0.00 43.27 6.53
7442 9853 2.763929 GCGAATCGTTTTTGGCGCG 61.764 57.895 0.00 0.00 35.02 6.86
7443 9854 1.154562 CGAATCGTTTTTGGCGCGA 60.155 52.632 12.10 0.00 39.02 5.87
7444 9855 0.723129 CGAATCGTTTTTGGCGCGAA 60.723 50.000 12.10 0.00 38.17 4.70
7445 9856 0.974836 GAATCGTTTTTGGCGCGAAG 59.025 50.000 12.10 0.00 38.17 3.79
7446 9857 0.589223 AATCGTTTTTGGCGCGAAGA 59.411 45.000 12.10 0.00 38.17 2.87
7447 9858 0.165944 ATCGTTTTTGGCGCGAAGAG 59.834 50.000 12.10 0.00 38.17 2.85
7478 9889 4.674496 GCGTCAGCGACTCTACTC 57.326 61.111 7.03 0.00 41.33 2.59
7479 9890 2.091533 GCGTCAGCGACTCTACTCT 58.908 57.895 7.03 0.00 41.33 3.24
7480 9891 0.027063 GCGTCAGCGACTCTACTCTC 59.973 60.000 7.03 0.00 41.33 3.20
7481 9892 1.647346 CGTCAGCGACTCTACTCTCT 58.353 55.000 7.03 0.00 41.33 3.10
7482 9893 2.004017 CGTCAGCGACTCTACTCTCTT 58.996 52.381 7.03 0.00 41.33 2.85
7483 9894 2.029970 CGTCAGCGACTCTACTCTCTTC 59.970 54.545 7.03 0.00 41.33 2.87
7484 9895 3.267483 GTCAGCGACTCTACTCTCTTCT 58.733 50.000 0.00 0.00 0.00 2.85
7485 9896 3.308866 GTCAGCGACTCTACTCTCTTCTC 59.691 52.174 0.00 0.00 0.00 2.87
7486 9897 2.284150 CAGCGACTCTACTCTCTTCTCG 59.716 54.545 0.00 0.00 0.00 4.04
7487 9898 1.004292 GCGACTCTACTCTCTTCTCGC 60.004 57.143 0.00 0.00 38.36 5.03
7488 9899 1.595794 CGACTCTACTCTCTTCTCGCC 59.404 57.143 0.00 0.00 0.00 5.54
7489 9900 1.944709 GACTCTACTCTCTTCTCGCCC 59.055 57.143 0.00 0.00 0.00 6.13
7490 9901 1.314730 CTCTACTCTCTTCTCGCCCC 58.685 60.000 0.00 0.00 0.00 5.80
7491 9902 0.920438 TCTACTCTCTTCTCGCCCCT 59.080 55.000 0.00 0.00 0.00 4.79
7492 9903 1.285373 TCTACTCTCTTCTCGCCCCTT 59.715 52.381 0.00 0.00 0.00 3.95
7493 9904 1.679153 CTACTCTCTTCTCGCCCCTTC 59.321 57.143 0.00 0.00 0.00 3.46
7494 9905 1.316706 ACTCTCTTCTCGCCCCTTCG 61.317 60.000 0.00 0.00 0.00 3.79
7495 9906 1.304217 TCTCTTCTCGCCCCTTCGT 60.304 57.895 0.00 0.00 0.00 3.85
7496 9907 1.139947 CTCTTCTCGCCCCTTCGTC 59.860 63.158 0.00 0.00 0.00 4.20
7497 9908 2.202623 CTTCTCGCCCCTTCGTCG 60.203 66.667 0.00 0.00 0.00 5.12
7498 9909 2.987547 TTCTCGCCCCTTCGTCGT 60.988 61.111 0.00 0.00 0.00 4.34
7499 9910 2.868999 CTTCTCGCCCCTTCGTCGTC 62.869 65.000 0.00 0.00 0.00 4.20
7500 9911 4.493747 CTCGCCCCTTCGTCGTCC 62.494 72.222 0.00 0.00 0.00 4.79
7502 9913 4.493747 CGCCCCTTCGTCGTCCTC 62.494 72.222 0.00 0.00 0.00 3.71
7503 9914 3.379445 GCCCCTTCGTCGTCCTCA 61.379 66.667 0.00 0.00 0.00 3.86
7504 9915 2.722201 GCCCCTTCGTCGTCCTCAT 61.722 63.158 0.00 0.00 0.00 2.90
7505 9916 1.437986 CCCCTTCGTCGTCCTCATC 59.562 63.158 0.00 0.00 0.00 2.92
7506 9917 1.064296 CCCTTCGTCGTCCTCATCG 59.936 63.158 0.00 0.00 0.00 3.84
7507 9918 1.586564 CCTTCGTCGTCCTCATCGC 60.587 63.158 0.00 0.00 0.00 4.58
7508 9919 1.586564 CTTCGTCGTCCTCATCGCC 60.587 63.158 0.00 0.00 0.00 5.54
7509 9920 1.994507 CTTCGTCGTCCTCATCGCCT 61.995 60.000 0.00 0.00 0.00 5.52
7510 9921 1.989966 TTCGTCGTCCTCATCGCCTC 61.990 60.000 0.00 0.00 0.00 4.70
7511 9922 2.024871 GTCGTCCTCATCGCCTCG 59.975 66.667 0.00 0.00 0.00 4.63
7512 9923 2.437895 TCGTCCTCATCGCCTCGT 60.438 61.111 0.00 0.00 0.00 4.18
7513 9924 2.044555 TCGTCCTCATCGCCTCGTT 61.045 57.895 0.00 0.00 0.00 3.85
7514 9925 1.153823 CGTCCTCATCGCCTCGTTT 60.154 57.895 0.00 0.00 0.00 3.60
7515 9926 1.140407 CGTCCTCATCGCCTCGTTTC 61.140 60.000 0.00 0.00 0.00 2.78
7516 9927 0.806492 GTCCTCATCGCCTCGTTTCC 60.806 60.000 0.00 0.00 0.00 3.13
7517 9928 1.521681 CCTCATCGCCTCGTTTCCC 60.522 63.158 0.00 0.00 0.00 3.97
7518 9929 1.878522 CTCATCGCCTCGTTTCCCG 60.879 63.158 0.00 0.00 38.13 5.14
7519 9930 3.564027 CATCGCCTCGTTTCCCGC 61.564 66.667 0.00 0.00 36.19 6.13
7526 9937 4.745751 TCGTTTCCCGCGGCGAAT 62.746 61.111 25.92 0.00 36.19 3.34
7527 9938 4.218478 CGTTTCCCGCGGCGAATC 62.218 66.667 25.92 20.47 0.00 2.52
7528 9939 3.122323 GTTTCCCGCGGCGAATCA 61.122 61.111 25.92 8.08 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 1.298859 CTACTGTCAGGTTTGCCCGC 61.299 60.000 4.53 0.00 38.74 6.13
51 52 0.044702 TGAGATGGTCCAGATGGGGT 59.955 55.000 0.00 0.00 37.22 4.95
59 62 1.984424 TGACATTGGTGAGATGGTCCA 59.016 47.619 0.00 0.00 0.00 4.02
77 80 3.563808 GCACTTGGTACTGTTGTCAATGA 59.436 43.478 0.00 0.00 0.00 2.57
104 107 2.898738 CACGGCTGCTCTGAGGAT 59.101 61.111 6.83 0.00 0.00 3.24
131 134 6.031751 ACGAGAACTTTCTTTCTCTGCTAT 57.968 37.500 10.34 0.00 46.46 2.97
154 157 1.365699 GCCTCGGATAAAAGCACGAA 58.634 50.000 0.00 0.00 34.70 3.85
155 158 0.804544 CGCCTCGGATAAAAGCACGA 60.805 55.000 0.00 0.00 0.00 4.35
175 178 0.607217 CCATGCAGAGTGACAGGCAA 60.607 55.000 0.00 0.00 40.02 4.52
183 186 1.134461 CCTCTTCTCCCATGCAGAGTG 60.134 57.143 9.92 5.94 32.31 3.51
189 192 1.153005 CAGCCCTCTTCTCCCATGC 60.153 63.158 0.00 0.00 0.00 4.06
202 205 0.746659 ACAAGTTTGCAGTTCAGCCC 59.253 50.000 0.00 0.00 0.00 5.19
205 208 4.095410 TGAACACAAGTTTGCAGTTCAG 57.905 40.909 20.25 0.00 44.35 3.02
232 237 3.199946 CCCTACTCCCTTAGACAATGCAA 59.800 47.826 0.00 0.00 0.00 4.08
306 311 1.040339 TTTTGCACACTGTGGGGGAC 61.040 55.000 12.67 0.00 33.64 4.46
345 353 2.084546 CCATGGTTTCTTCCTCGTTCC 58.915 52.381 2.57 0.00 0.00 3.62
346 354 3.053831 TCCATGGTTTCTTCCTCGTTC 57.946 47.619 12.58 0.00 0.00 3.95
352 360 2.880890 CGGATGATCCATGGTTTCTTCC 59.119 50.000 25.72 25.72 35.91 3.46
355 363 3.931907 TTCGGATGATCCATGGTTTCT 57.068 42.857 12.58 0.00 35.91 2.52
387 395 4.265893 TGCACAAGAACTACTTTGTTCCA 58.734 39.130 4.08 0.00 45.25 3.53
416 424 1.484065 GGGATAGGGTCTCCAGAGCAT 60.484 57.143 8.01 3.25 43.82 3.79
463 471 5.045578 AGCAGATTCTCAACTTTAAGGGCTA 60.046 40.000 0.00 0.00 0.00 3.93
471 479 4.268359 GGATGGAGCAGATTCTCAACTTT 58.732 43.478 0.00 0.00 34.84 2.66
491 499 3.006728 AGGAAATGGACCGGCGGA 61.007 61.111 35.78 11.41 0.00 5.54
588 596 1.191535 CGGACTTGGAGTATGGACCA 58.808 55.000 0.00 0.00 0.00 4.02
697 706 2.897972 GTCCGGCAACTATCGGGT 59.102 61.111 0.00 0.00 45.69 5.28
700 710 0.379669 AGTACGTCCGGCAACTATCG 59.620 55.000 0.00 0.00 0.00 2.92
751 761 4.752879 TTACTGTGCTCGCCGCCC 62.753 66.667 0.00 0.00 38.05 6.13
768 779 0.110486 ACCGGCACAACAATCCTCTT 59.890 50.000 0.00 0.00 0.00 2.85
794 805 2.433318 GTTTCGAGCCTCAGCGCT 60.433 61.111 2.64 2.64 46.67 5.92
852 863 0.033504 TCTTCTTTGTCCTTCGCGCT 59.966 50.000 5.56 0.00 0.00 5.92
882 893 6.933514 ATTCACCAATTTGACCTACCAAAT 57.066 33.333 0.00 0.00 45.58 2.32
883 894 6.739331 AATTCACCAATTTGACCTACCAAA 57.261 33.333 0.00 0.00 39.93 3.28
884 895 6.739331 AAATTCACCAATTTGACCTACCAA 57.261 33.333 0.00 0.00 40.16 3.67
894 905 9.874205 ATTCGATTACATCAAATTCACCAATTT 57.126 25.926 0.00 0.00 42.03 1.82
895 906 9.520204 GATTCGATTACATCAAATTCACCAATT 57.480 29.630 0.00 0.00 33.27 2.32
896 907 7.857389 CGATTCGATTACATCAAATTCACCAAT 59.143 33.333 0.00 0.00 0.00 3.16
897 908 7.186128 CGATTCGATTACATCAAATTCACCAA 58.814 34.615 0.00 0.00 0.00 3.67
898 909 6.238347 CCGATTCGATTACATCAAATTCACCA 60.238 38.462 7.83 0.00 0.00 4.17
899 910 6.136071 CCGATTCGATTACATCAAATTCACC 58.864 40.000 7.83 0.00 0.00 4.02
900 911 5.621228 GCCGATTCGATTACATCAAATTCAC 59.379 40.000 7.83 0.00 0.00 3.18
901 912 5.558083 CGCCGATTCGATTACATCAAATTCA 60.558 40.000 7.83 0.00 0.00 2.57
902 913 4.840772 CGCCGATTCGATTACATCAAATTC 59.159 41.667 7.83 0.00 0.00 2.17
903 914 4.772434 CGCCGATTCGATTACATCAAATT 58.228 39.130 7.83 0.00 0.00 1.82
904 915 3.363970 GCGCCGATTCGATTACATCAAAT 60.364 43.478 7.83 0.00 0.00 2.32
905 916 2.033236 GCGCCGATTCGATTACATCAAA 60.033 45.455 7.83 0.00 0.00 2.69
906 917 1.525197 GCGCCGATTCGATTACATCAA 59.475 47.619 7.83 0.00 0.00 2.57
907 918 1.136690 GCGCCGATTCGATTACATCA 58.863 50.000 7.83 0.00 0.00 3.07
908 919 0.091344 CGCGCCGATTCGATTACATC 59.909 55.000 7.83 0.00 0.00 3.06
909 920 0.318360 TCGCGCCGATTCGATTACAT 60.318 50.000 7.83 0.00 0.00 2.29
910 921 0.525882 TTCGCGCCGATTCGATTACA 60.526 50.000 7.83 0.00 35.23 2.41
911 922 0.158928 CTTCGCGCCGATTCGATTAC 59.841 55.000 7.83 0.00 35.23 1.89
912 923 0.029700 TCTTCGCGCCGATTCGATTA 59.970 50.000 7.83 0.00 35.23 1.75
913 924 0.804544 TTCTTCGCGCCGATTCGATT 60.805 50.000 7.83 0.00 35.23 3.34
914 925 1.226859 TTCTTCGCGCCGATTCGAT 60.227 52.632 7.83 0.00 35.23 3.59
915 926 2.156446 GTTCTTCGCGCCGATTCGA 61.156 57.895 7.83 0.00 35.23 3.71
916 927 1.951181 TTGTTCTTCGCGCCGATTCG 61.951 55.000 0.00 0.00 35.23 3.34
917 928 0.165079 TTTGTTCTTCGCGCCGATTC 59.835 50.000 0.00 0.00 35.23 2.52
918 929 0.165944 CTTTGTTCTTCGCGCCGATT 59.834 50.000 0.00 0.00 35.23 3.34
919 930 0.669318 TCTTTGTTCTTCGCGCCGAT 60.669 50.000 0.00 0.00 35.23 4.18
920 931 0.876777 TTCTTTGTTCTTCGCGCCGA 60.877 50.000 0.00 0.00 0.00 5.54
921 932 0.451135 CTTCTTTGTTCTTCGCGCCG 60.451 55.000 0.00 0.00 0.00 6.46
922 933 0.865769 TCTTCTTTGTTCTTCGCGCC 59.134 50.000 0.00 0.00 0.00 6.53
923 934 1.792949 TCTCTTCTTTGTTCTTCGCGC 59.207 47.619 0.00 0.00 0.00 6.86
924 935 2.159907 GCTCTCTTCTTTGTTCTTCGCG 60.160 50.000 0.00 0.00 0.00 5.87
925 936 2.802816 TGCTCTCTTCTTTGTTCTTCGC 59.197 45.455 0.00 0.00 0.00 4.70
926 937 5.409643 TTTGCTCTCTTCTTTGTTCTTCG 57.590 39.130 0.00 0.00 0.00 3.79
927 938 6.963796 TCATTTGCTCTCTTCTTTGTTCTTC 58.036 36.000 0.00 0.00 0.00 2.87
928 939 6.949352 TCATTTGCTCTCTTCTTTGTTCTT 57.051 33.333 0.00 0.00 0.00 2.52
929 940 6.949352 TTCATTTGCTCTCTTCTTTGTTCT 57.051 33.333 0.00 0.00 0.00 3.01
930 941 8.485591 CAAATTCATTTGCTCTCTTCTTTGTTC 58.514 33.333 0.00 0.00 40.42 3.18
931 942 7.440255 CCAAATTCATTTGCTCTCTTCTTTGTT 59.560 33.333 6.73 0.00 44.32 2.83
932 943 6.927381 CCAAATTCATTTGCTCTCTTCTTTGT 59.073 34.615 6.73 0.00 44.32 2.83
933 944 6.927381 ACCAAATTCATTTGCTCTCTTCTTTG 59.073 34.615 6.73 0.00 44.32 2.77
934 945 7.059202 ACCAAATTCATTTGCTCTCTTCTTT 57.941 32.000 6.73 0.00 44.32 2.52
935 946 6.661304 ACCAAATTCATTTGCTCTCTTCTT 57.339 33.333 6.73 0.00 44.32 2.52
936 947 7.170965 TCTACCAAATTCATTTGCTCTCTTCT 58.829 34.615 6.73 0.00 44.32 2.85
937 948 7.383102 TCTACCAAATTCATTTGCTCTCTTC 57.617 36.000 6.73 0.00 44.32 2.87
938 949 7.613022 TGATCTACCAAATTCATTTGCTCTCTT 59.387 33.333 6.73 0.00 44.32 2.85
967 978 7.121907 TGGATTCGATTACATCAAATTCACCAA 59.878 33.333 0.00 0.00 0.00 3.67
982 993 9.573166 AGGATTGTATTTGATTGGATTCGATTA 57.427 29.630 0.00 0.00 0.00 1.75
1005 1036 3.388676 TGACTAAACGGGTCTCAAAAGGA 59.611 43.478 0.00 0.00 35.04 3.36
1007 1038 4.377897 AGTGACTAAACGGGTCTCAAAAG 58.622 43.478 0.00 0.00 35.04 2.27
1033 1064 9.968870 TGTATTGTGTTTAAAAAGTTATGGGAC 57.031 29.630 0.00 0.00 0.00 4.46
1039 1070 9.350357 TGCGTTTGTATTGTGTTTAAAAAGTTA 57.650 25.926 0.00 0.00 0.00 2.24
1040 1071 8.240883 TGCGTTTGTATTGTGTTTAAAAAGTT 57.759 26.923 0.00 0.00 0.00 2.66
1041 1072 7.813852 TGCGTTTGTATTGTGTTTAAAAAGT 57.186 28.000 0.00 0.00 0.00 2.66
1042 1073 7.369542 GCTTGCGTTTGTATTGTGTTTAAAAAG 59.630 33.333 0.00 0.00 0.00 2.27
1043 1074 7.174082 GCTTGCGTTTGTATTGTGTTTAAAAA 58.826 30.769 0.00 0.00 0.00 1.94
1044 1075 6.506513 CGCTTGCGTTTGTATTGTGTTTAAAA 60.507 34.615 6.86 0.00 0.00 1.52
1045 1076 5.052304 CGCTTGCGTTTGTATTGTGTTTAAA 60.052 36.000 6.86 0.00 0.00 1.52
1046 1077 4.438145 CGCTTGCGTTTGTATTGTGTTTAA 59.562 37.500 6.86 0.00 0.00 1.52
1047 1078 3.969352 CGCTTGCGTTTGTATTGTGTTTA 59.031 39.130 6.86 0.00 0.00 2.01
1048 1079 2.786578 CGCTTGCGTTTGTATTGTGTTT 59.213 40.909 6.86 0.00 0.00 2.83
1049 1080 2.380660 CGCTTGCGTTTGTATTGTGTT 58.619 42.857 6.86 0.00 0.00 3.32
1050 1081 1.924191 GCGCTTGCGTTTGTATTGTGT 60.924 47.619 16.38 0.00 0.00 3.72
1051 1082 0.702383 GCGCTTGCGTTTGTATTGTG 59.298 50.000 16.38 0.00 0.00 3.33
1052 1083 0.591170 AGCGCTTGCGTTTGTATTGT 59.409 45.000 16.38 0.00 45.69 2.71
1053 1084 2.519002 TAGCGCTTGCGTTTGTATTG 57.481 45.000 18.68 0.00 45.69 1.90
1054 1085 3.757745 ATTAGCGCTTGCGTTTGTATT 57.242 38.095 18.68 0.00 45.69 1.89
1055 1086 5.107220 GGTATATTAGCGCTTGCGTTTGTAT 60.107 40.000 18.68 13.10 45.69 2.29
1056 1087 4.209703 GGTATATTAGCGCTTGCGTTTGTA 59.790 41.667 18.68 7.44 45.69 2.41
1057 1088 3.001939 GGTATATTAGCGCTTGCGTTTGT 59.998 43.478 18.68 5.57 45.69 2.83
1058 1089 3.541711 GGTATATTAGCGCTTGCGTTTG 58.458 45.455 18.68 0.00 45.69 2.93
1059 1090 2.546789 GGGTATATTAGCGCTTGCGTTT 59.453 45.455 18.68 7.94 45.69 3.60
1060 1091 2.140717 GGGTATATTAGCGCTTGCGTT 58.859 47.619 18.68 12.96 45.69 4.84
1061 1092 1.069513 TGGGTATATTAGCGCTTGCGT 59.930 47.619 18.68 2.36 45.69 5.24
1062 1093 1.459592 GTGGGTATATTAGCGCTTGCG 59.540 52.381 18.68 10.90 45.69 4.85
1063 1094 2.223377 GTGTGGGTATATTAGCGCTTGC 59.777 50.000 18.68 0.00 39.58 4.01
1064 1095 3.728845 AGTGTGGGTATATTAGCGCTTG 58.271 45.455 18.68 0.00 0.00 4.01
1065 1096 4.587684 ACTAGTGTGGGTATATTAGCGCTT 59.412 41.667 18.68 0.00 0.00 4.68
1066 1097 4.150359 ACTAGTGTGGGTATATTAGCGCT 58.850 43.478 17.26 17.26 0.00 5.92
1067 1098 4.516365 ACTAGTGTGGGTATATTAGCGC 57.484 45.455 0.00 0.00 0.00 5.92
1068 1099 6.206243 ACAGTACTAGTGTGGGTATATTAGCG 59.794 42.308 5.39 0.00 29.04 4.26
1069 1100 7.230108 TGACAGTACTAGTGTGGGTATATTAGC 59.770 40.741 5.39 0.00 30.64 3.09
1070 1101 8.687292 TGACAGTACTAGTGTGGGTATATTAG 57.313 38.462 5.39 0.00 30.64 1.73
1071 1102 9.293404 GATGACAGTACTAGTGTGGGTATATTA 57.707 37.037 5.39 0.00 30.64 0.98
1072 1103 8.005388 AGATGACAGTACTAGTGTGGGTATATT 58.995 37.037 5.39 0.00 30.64 1.28
1073 1104 7.527796 AGATGACAGTACTAGTGTGGGTATAT 58.472 38.462 5.39 0.00 30.64 0.86
1074 1105 6.907961 AGATGACAGTACTAGTGTGGGTATA 58.092 40.000 5.39 0.00 30.64 1.47
1075 1106 5.767670 AGATGACAGTACTAGTGTGGGTAT 58.232 41.667 5.39 0.09 30.64 2.73
1076 1107 5.188988 AGATGACAGTACTAGTGTGGGTA 57.811 43.478 5.39 0.00 30.64 3.69
1077 1108 4.048970 AGATGACAGTACTAGTGTGGGT 57.951 45.455 5.39 0.00 30.64 4.51
1078 1109 4.220821 ACAAGATGACAGTACTAGTGTGGG 59.779 45.833 5.39 0.00 30.64 4.61
1079 1110 5.048013 TGACAAGATGACAGTACTAGTGTGG 60.048 44.000 5.39 0.00 30.64 4.17
1080 1111 6.013842 TGACAAGATGACAGTACTAGTGTG 57.986 41.667 5.39 5.57 30.64 3.82
1081 1112 6.842437 ATGACAAGATGACAGTACTAGTGT 57.158 37.500 5.39 0.00 33.77 3.55
1082 1113 7.315890 TGAATGACAAGATGACAGTACTAGTG 58.684 38.462 5.39 0.00 0.00 2.74
1083 1114 7.468141 TGAATGACAAGATGACAGTACTAGT 57.532 36.000 0.00 0.00 0.00 2.57
1098 1129 3.593442 AACCACCTCCTTGAATGACAA 57.407 42.857 0.00 0.00 36.97 3.18
1099 1130 3.221771 CAAACCACCTCCTTGAATGACA 58.778 45.455 0.00 0.00 0.00 3.58
1106 1137 1.228862 CCCCCAAACCACCTCCTTG 60.229 63.158 0.00 0.00 0.00 3.61
1133 1164 1.344438 AGACAAGATCTCACGGCAACA 59.656 47.619 0.00 0.00 28.16 3.33
1191 1227 1.381872 ATGAGGACGGGACTGGAGG 60.382 63.158 0.00 0.00 0.00 4.30
1196 1232 2.043852 AGCGATGAGGACGGGACT 60.044 61.111 0.00 0.00 0.00 3.85
1342 1379 3.434637 CGACATTTTCGCCTAAATTGGG 58.565 45.455 0.00 0.00 41.87 4.12
1485 1523 2.966309 GAAAGGGCTCAACGGCGTG 61.966 63.158 15.70 8.32 39.52 5.34
1486 1524 2.668550 GAAAGGGCTCAACGGCGT 60.669 61.111 6.77 6.77 39.52 5.68
1487 1525 2.358737 AGAAAGGGCTCAACGGCG 60.359 61.111 4.80 4.80 39.52 6.46
1488 1526 2.041115 GGAGAAAGGGCTCAACGGC 61.041 63.158 0.00 0.00 36.62 5.68
1489 1527 0.674895 CTGGAGAAAGGGCTCAACGG 60.675 60.000 0.00 0.00 36.62 4.44
1490 1528 0.035458 ACTGGAGAAAGGGCTCAACG 59.965 55.000 0.00 0.00 36.62 4.10
1491 1529 2.303311 AGTACTGGAGAAAGGGCTCAAC 59.697 50.000 0.00 0.00 36.62 3.18
1492 1530 2.303022 CAGTACTGGAGAAAGGGCTCAA 59.697 50.000 15.49 0.00 36.62 3.02
1493 1531 1.902508 CAGTACTGGAGAAAGGGCTCA 59.097 52.381 15.49 0.00 36.62 4.26
1494 1532 1.406205 GCAGTACTGGAGAAAGGGCTC 60.406 57.143 23.95 0.00 0.00 4.70
1495 1533 0.615850 GCAGTACTGGAGAAAGGGCT 59.384 55.000 23.95 0.00 0.00 5.19
1496 1534 0.615850 AGCAGTACTGGAGAAAGGGC 59.384 55.000 23.95 6.48 0.00 5.19
1497 1535 2.159226 CGTAGCAGTACTGGAGAAAGGG 60.159 54.545 23.95 0.00 0.00 3.95
1498 1536 3.152261 CGTAGCAGTACTGGAGAAAGG 57.848 52.381 23.95 0.00 0.00 3.11
1662 1701 2.251818 AGGTAGTTGAAGCAGAGCAGA 58.748 47.619 0.00 0.00 0.00 4.26
1663 1702 2.758736 AGGTAGTTGAAGCAGAGCAG 57.241 50.000 0.00 0.00 0.00 4.24
1664 1703 3.071602 AGAAAGGTAGTTGAAGCAGAGCA 59.928 43.478 0.00 0.00 0.00 4.26
1665 1704 3.669536 AGAAAGGTAGTTGAAGCAGAGC 58.330 45.455 0.00 0.00 0.00 4.09
1775 1825 6.343716 TGCACAAATACCAGATGAACATTT 57.656 33.333 0.00 0.00 0.00 2.32
1776 1826 5.981088 TGCACAAATACCAGATGAACATT 57.019 34.783 0.00 0.00 0.00 2.71
1862 2784 4.319911 GGCTAGTCTCGAGCTTGTACATAG 60.320 50.000 7.81 5.67 39.98 2.23
1872 2794 0.243907 TGTGTTGGCTAGTCTCGAGC 59.756 55.000 7.81 2.90 39.33 5.03
1881 2803 5.759273 ACGTTGTAAATTAGTGTGTTGGCTA 59.241 36.000 0.00 0.00 0.00 3.93
1891 2813 6.293244 GGTTTGCTCTCACGTTGTAAATTAGT 60.293 38.462 0.00 0.00 0.00 2.24
1931 2923 2.395690 GCCATCGTCGACAAAGCG 59.604 61.111 17.16 0.53 0.00 4.68
2095 3087 1.730501 ACATGATCGAACAGTGCAGG 58.269 50.000 0.00 0.00 0.00 4.85
2131 3123 1.060698 GCCTGTTAGATTCGTTGCGTC 59.939 52.381 0.00 0.00 0.00 5.19
2138 3130 6.851222 AGTCAATATTGCCTGTTAGATTCG 57.149 37.500 10.76 0.00 0.00 3.34
2139 3131 9.294030 CAAAAGTCAATATTGCCTGTTAGATTC 57.706 33.333 10.76 0.00 0.00 2.52
2168 3160 8.708742 TCATATAAATCAGCTATTTTTCCGACG 58.291 33.333 6.51 0.00 38.71 5.12
2221 4499 9.988350 GTATATGTTATCCTTGATTATTTGCCG 57.012 33.333 0.00 0.00 0.00 5.69
2255 4533 7.761651 ACTAAACGTTCTTATATTTCGGGAC 57.238 36.000 0.00 0.00 0.00 4.46
2256 4534 8.686334 AGTACTAAACGTTCTTATATTTCGGGA 58.314 33.333 0.00 0.00 0.00 5.14
2257 4535 8.862550 AGTACTAAACGTTCTTATATTTCGGG 57.137 34.615 0.00 0.00 0.00 5.14
2268 4546 9.404348 GCTAACTTCTAAAGTACTAAACGTTCT 57.596 33.333 0.00 0.00 41.91 3.01
2269 4547 9.185192 TGCTAACTTCTAAAGTACTAAACGTTC 57.815 33.333 0.00 0.00 41.91 3.95
2270 4548 9.533253 TTGCTAACTTCTAAAGTACTAAACGTT 57.467 29.630 0.00 0.00 41.91 3.99
2271 4549 9.702494 ATTGCTAACTTCTAAAGTACTAAACGT 57.298 29.630 0.00 0.00 41.91 3.99
2272 4550 9.953825 CATTGCTAACTTCTAAAGTACTAAACG 57.046 33.333 0.00 0.00 41.91 3.60
2276 4554 9.431887 CAACCATTGCTAACTTCTAAAGTACTA 57.568 33.333 0.00 0.00 41.91 1.82
2277 4555 7.937394 ACAACCATTGCTAACTTCTAAAGTACT 59.063 33.333 0.00 0.00 41.91 2.73
2278 4556 8.015658 CACAACCATTGCTAACTTCTAAAGTAC 58.984 37.037 0.00 0.00 41.91 2.73
2279 4557 7.717875 ACACAACCATTGCTAACTTCTAAAGTA 59.282 33.333 0.00 0.00 41.91 2.24
2280 4558 6.546034 ACACAACCATTGCTAACTTCTAAAGT 59.454 34.615 0.00 0.00 45.46 2.66
2281 4559 6.970484 ACACAACCATTGCTAACTTCTAAAG 58.030 36.000 0.00 0.00 0.00 1.85
2282 4560 6.770785 AGACACAACCATTGCTAACTTCTAAA 59.229 34.615 0.00 0.00 0.00 1.85
2283 4561 6.296026 AGACACAACCATTGCTAACTTCTAA 58.704 36.000 0.00 0.00 0.00 2.10
2284 4562 5.865085 AGACACAACCATTGCTAACTTCTA 58.135 37.500 0.00 0.00 0.00 2.10
2285 4563 4.718961 AGACACAACCATTGCTAACTTCT 58.281 39.130 0.00 0.00 0.00 2.85
2286 4564 6.017440 TGTTAGACACAACCATTGCTAACTTC 60.017 38.462 0.00 0.00 36.10 3.01
2287 4565 5.825679 TGTTAGACACAACCATTGCTAACTT 59.174 36.000 0.00 0.00 36.10 2.66
2288 4566 5.373222 TGTTAGACACAACCATTGCTAACT 58.627 37.500 0.00 0.00 36.10 2.24
2304 4582 1.670811 CCGTCCATTGCCATGTTAGAC 59.329 52.381 0.00 0.00 0.00 2.59
2321 4599 5.452917 GGGTATTTAAGTATCTGCACTCCGT 60.453 44.000 0.00 0.00 0.00 4.69
2427 4706 4.125703 ACAATGATACTAGCAGCTTCAGC 58.874 43.478 0.00 0.00 42.49 4.26
2456 4735 3.838244 TTAGCAGGTGTGTGTTCTTCT 57.162 42.857 0.00 0.00 0.00 2.85
2457 4736 3.003378 GGTTTAGCAGGTGTGTGTTCTTC 59.997 47.826 0.00 0.00 0.00 2.87
2458 4737 2.949644 GGTTTAGCAGGTGTGTGTTCTT 59.050 45.455 0.00 0.00 0.00 2.52
2585 4864 6.594547 CACAACAATGTCATTCTCAGAGAGAT 59.405 38.462 0.00 0.00 36.71 2.75
2632 4913 5.392703 GGTTTTTATAGAAGGTTCAAGGGCG 60.393 44.000 0.00 0.00 0.00 6.13
2699 4980 2.669878 GCCTTTCAGGGCCAATCAA 58.330 52.632 6.18 0.00 45.92 2.57
2744 5025 0.305922 GCAACTGACAGCTGTGACAC 59.694 55.000 27.27 10.48 0.00 3.67
2798 5079 3.815401 TCAGTTCAGCAGAAAGGCTAAAC 59.185 43.478 0.00 0.00 43.68 2.01
2803 5084 0.520847 GCTCAGTTCAGCAGAAAGGC 59.479 55.000 0.00 0.00 39.43 4.35
2860 5141 6.723977 TGCAATCAAATACTAAAGAAAGGGGT 59.276 34.615 0.00 0.00 0.00 4.95
2960 5241 7.173390 GCACTGAAATAAGTAGAAAAGGTCAGT 59.827 37.037 0.00 0.00 42.85 3.41
3253 5535 7.123397 TGGGATTAAATTAAGCAACACATAGCA 59.877 33.333 3.35 0.00 0.00 3.49
3497 5779 7.859377 CACACATTCTGTTTTCTATCATATGCC 59.141 37.037 0.00 0.00 0.00 4.40
3514 5796 6.212388 AGAGAGGAGTTTACATCACACATTCT 59.788 38.462 0.00 0.00 0.00 2.40
3958 6241 5.291971 AGACCATGTCAAATGCTTTTCAAC 58.708 37.500 0.00 0.00 34.60 3.18
3980 6263 7.727181 AGGTTATAAGTATGCTGTCTACCAAG 58.273 38.462 0.00 0.00 0.00 3.61
3981 6264 7.469594 CGAGGTTATAAGTATGCTGTCTACCAA 60.470 40.741 0.00 0.00 0.00 3.67
3982 6265 6.016527 CGAGGTTATAAGTATGCTGTCTACCA 60.017 42.308 0.00 0.00 0.00 3.25
3983 6266 6.206243 TCGAGGTTATAAGTATGCTGTCTACC 59.794 42.308 0.00 0.00 0.00 3.18
3984 6267 7.172875 TCTCGAGGTTATAAGTATGCTGTCTAC 59.827 40.741 13.56 0.00 0.00 2.59
3985 6268 7.222161 TCTCGAGGTTATAAGTATGCTGTCTA 58.778 38.462 13.56 0.00 0.00 2.59
3986 6269 6.062749 TCTCGAGGTTATAAGTATGCTGTCT 58.937 40.000 13.56 0.00 0.00 3.41
3987 6270 6.315091 TCTCGAGGTTATAAGTATGCTGTC 57.685 41.667 13.56 0.00 0.00 3.51
3988 6271 6.902771 ATCTCGAGGTTATAAGTATGCTGT 57.097 37.500 13.56 0.00 0.00 4.40
4026 6318 9.187996 TGATAATGAGGATTGCAACTGATTTTA 57.812 29.630 0.00 0.00 0.00 1.52
4171 6463 9.629878 TTTTAGTGGAACCTAATTCAACAACTA 57.370 29.630 0.00 0.00 43.04 2.24
4237 6542 8.330302 GCAGCATTATTGAATGAAACAATAACC 58.670 33.333 12.92 8.83 46.01 2.85
4248 6553 4.500887 CCAAGGAGGCAGCATTATTGAATG 60.501 45.833 6.73 0.00 44.62 2.67
4354 6659 8.894731 CATAACTAGTCTGTTCTAGCACTCTAA 58.105 37.037 0.00 0.00 40.50 2.10
4402 6707 3.903714 CCCATACACACCCATAGAGATGA 59.096 47.826 0.00 0.00 34.73 2.92
4478 6791 1.280710 TGAGGTGTGTGTTGGACTGTT 59.719 47.619 0.00 0.00 0.00 3.16
4479 6792 0.908910 TGAGGTGTGTGTTGGACTGT 59.091 50.000 0.00 0.00 0.00 3.55
4480 6793 2.260844 ATGAGGTGTGTGTTGGACTG 57.739 50.000 0.00 0.00 0.00 3.51
4481 6794 2.487265 GGAATGAGGTGTGTGTTGGACT 60.487 50.000 0.00 0.00 0.00 3.85
4482 6795 1.880027 GGAATGAGGTGTGTGTTGGAC 59.120 52.381 0.00 0.00 0.00 4.02
4483 6796 1.774254 AGGAATGAGGTGTGTGTTGGA 59.226 47.619 0.00 0.00 0.00 3.53
4484 6797 2.276732 AGGAATGAGGTGTGTGTTGG 57.723 50.000 0.00 0.00 0.00 3.77
4485 6798 5.473162 TCAATTAGGAATGAGGTGTGTGTTG 59.527 40.000 0.00 0.00 0.00 3.33
4632 6946 2.427453 CAGTAGTGGCATCGAGTTAGGT 59.573 50.000 0.00 0.00 0.00 3.08
4942 7260 5.461737 TCCAAACGAACAATGCTTTTGAATC 59.538 36.000 6.92 4.52 30.23 2.52
5017 7335 7.061752 ACTAAATCAGCGACAAATTGTACTC 57.938 36.000 0.00 0.00 0.00 2.59
5047 7365 9.244799 CATATTAGTTGTCGCTGATTTAGTACA 57.755 33.333 0.00 0.00 0.00 2.90
5074 7397 5.494724 CATAGTCATGTATCCCCTCCATTG 58.505 45.833 0.00 0.00 0.00 2.82
5085 7408 7.387265 TGTGGAAATACCCATAGTCATGTAT 57.613 36.000 0.00 0.00 38.66 2.29
5315 7723 4.704833 AGGTGCTGCGGCGTCAAT 62.705 61.111 13.96 0.00 42.25 2.57
5350 7758 2.488204 TGCGGATCATCTCAAAACCA 57.512 45.000 0.00 0.00 0.00 3.67
5351 7759 2.478539 GCTTGCGGATCATCTCAAAACC 60.479 50.000 0.00 0.00 0.00 3.27
5352 7760 2.421424 AGCTTGCGGATCATCTCAAAAC 59.579 45.455 0.00 0.00 0.00 2.43
5626 8034 3.445096 GTGAATGACCAGCTAGCCAAATT 59.555 43.478 12.13 4.82 0.00 1.82
5677 8085 4.321230 GCACCCTTCTTAACCATGTTTCTG 60.321 45.833 0.00 0.00 0.00 3.02
5698 8106 5.171339 AGAGAAAGCTATCCAAAAGAGCA 57.829 39.130 0.00 0.00 38.73 4.26
5713 8121 4.275936 ACAAACGGTGGATTGAAGAGAAAG 59.724 41.667 0.00 0.00 31.09 2.62
6120 8528 3.298619 CCATGGGCATATTTGAAGTCCA 58.701 45.455 2.85 0.00 0.00 4.02
6237 8646 4.835056 ACAGCTGGAGTATATGATACTGCA 59.165 41.667 19.93 16.77 42.26 4.41
6357 8766 2.515757 TGCAAGCCGACAGTGCAA 60.516 55.556 0.00 0.00 44.88 4.08
6370 8779 7.495901 TCAGGAAATTAACAGATTTTGTGCAA 58.504 30.769 0.00 0.00 40.74 4.08
6711 9122 9.719279 AAAATCATAAAGTGCACAAAAATGTTG 57.281 25.926 21.04 5.56 0.00 3.33
6836 9247 1.831736 AGAAATACCACCGGTCTCCTG 59.168 52.381 2.59 0.00 37.09 3.86
6837 9248 2.108970 GAGAAATACCACCGGTCTCCT 58.891 52.381 2.59 0.00 37.09 3.69
6838 9249 2.108970 AGAGAAATACCACCGGTCTCC 58.891 52.381 2.59 0.00 37.09 3.71
6839 9250 2.496470 ACAGAGAAATACCACCGGTCTC 59.504 50.000 2.59 6.61 37.09 3.36
6840 9251 2.537143 ACAGAGAAATACCACCGGTCT 58.463 47.619 2.59 0.00 37.09 3.85
6841 9252 3.000727 CAACAGAGAAATACCACCGGTC 58.999 50.000 2.59 0.00 37.09 4.79
6842 9253 2.874457 GCAACAGAGAAATACCACCGGT 60.874 50.000 0.00 0.00 40.16 5.28
6843 9254 1.737793 GCAACAGAGAAATACCACCGG 59.262 52.381 0.00 0.00 0.00 5.28
6844 9255 2.416547 CAGCAACAGAGAAATACCACCG 59.583 50.000 0.00 0.00 0.00 4.94
6845 9256 3.412386 ACAGCAACAGAGAAATACCACC 58.588 45.455 0.00 0.00 0.00 4.61
6846 9257 5.932303 TCTTACAGCAACAGAGAAATACCAC 59.068 40.000 0.00 0.00 0.00 4.16
6862 9273 6.442513 AAGCTAATGAACCATTCTTACAGC 57.557 37.500 0.00 0.00 35.54 4.40
6864 9275 6.480763 TGGAAGCTAATGAACCATTCTTACA 58.519 36.000 0.00 0.00 35.54 2.41
6866 9277 7.118723 ACATGGAAGCTAATGAACCATTCTTA 58.881 34.615 10.11 0.00 38.99 2.10
6913 9324 1.602377 CTTTCTGTCGGGTTGTTCCAC 59.398 52.381 0.00 0.00 38.11 4.02
6938 9349 0.512518 CACGAGAAGTTCATGCGCAA 59.487 50.000 17.11 0.00 0.00 4.85
6939 9350 1.291184 CCACGAGAAGTTCATGCGCA 61.291 55.000 14.96 14.96 0.00 6.09
6948 9359 0.759346 AACAGAAGGCCACGAGAAGT 59.241 50.000 5.01 0.00 0.00 3.01
6987 9398 2.069273 CAAGATCACAGGTTGGTCGAC 58.931 52.381 7.13 7.13 40.74 4.20
6988 9399 1.608025 GCAAGATCACAGGTTGGTCGA 60.608 52.381 0.00 0.00 40.74 4.20
7010 9421 2.032528 CGGCACAAAGAGGGAGCA 59.967 61.111 0.00 0.00 0.00 4.26
7077 9488 6.927936 CGAGTCTTGATAGTGAAATCATGGAT 59.072 38.462 0.00 0.00 35.84 3.41
7088 9499 3.064134 TCGAGCTTCGAGTCTTGATAGTG 59.936 47.826 4.47 0.00 44.82 2.74
7128 9539 6.995091 GGATCCATCAGTAGAGCTATTTTTGT 59.005 38.462 6.95 0.00 0.00 2.83
7145 9556 5.699915 CACATTCTGTGTAGATGGATCCATC 59.300 44.000 37.64 37.64 45.57 3.51
7146 9557 5.618236 CACATTCTGTGTAGATGGATCCAT 58.382 41.667 27.66 27.66 43.08 3.41
7181 9592 2.924454 GCGGCTCATAGCTCATGTAGAC 60.924 54.545 0.00 0.00 41.99 2.59
7265 9676 4.448976 GAGGGCCTTCTTGGGGGC 62.449 72.222 7.89 0.00 46.89 5.80
7266 9677 3.744155 GGAGGGCCTTCTTGGGGG 61.744 72.222 15.38 0.00 36.00 5.40
7267 9678 2.941025 TGGAGGGCCTTCTTGGGG 60.941 66.667 14.33 0.00 36.00 4.96
7268 9679 2.679716 CTGGAGGGCCTTCTTGGG 59.320 66.667 14.33 0.00 36.00 4.12
7269 9680 2.679716 CCTGGAGGGCCTTCTTGG 59.320 66.667 14.33 11.54 39.35 3.61
7295 9706 3.471244 TTTTTGGTGCCGGCGAACG 62.471 57.895 23.90 0.00 43.80 3.95
7296 9707 2.413765 TTTTTGGTGCCGGCGAAC 59.586 55.556 23.90 15.69 0.00 3.95
7310 9721 2.686816 CGCGACTGGGCCGATTTTT 61.687 57.895 0.00 0.00 0.00 1.94
7311 9722 3.124921 CGCGACTGGGCCGATTTT 61.125 61.111 0.00 0.00 0.00 1.82
7327 9738 3.963124 AATTGGGCTCTTGGGGGCG 62.963 63.158 0.00 0.00 0.00 6.13
7328 9739 1.200760 AAAATTGGGCTCTTGGGGGC 61.201 55.000 0.00 0.00 0.00 5.80
7329 9740 0.904649 GAAAATTGGGCTCTTGGGGG 59.095 55.000 0.00 0.00 0.00 5.40
7330 9741 0.532115 CGAAAATTGGGCTCTTGGGG 59.468 55.000 0.00 0.00 0.00 4.96
7331 9742 0.108662 GCGAAAATTGGGCTCTTGGG 60.109 55.000 0.00 0.00 0.00 4.12
7332 9743 0.108662 GGCGAAAATTGGGCTCTTGG 60.109 55.000 0.00 0.00 0.00 3.61
7333 9744 0.456653 CGGCGAAAATTGGGCTCTTG 60.457 55.000 0.00 0.00 0.00 3.02
7334 9745 1.595093 CCGGCGAAAATTGGGCTCTT 61.595 55.000 9.30 0.00 0.00 2.85
7335 9746 2.046285 CCGGCGAAAATTGGGCTCT 61.046 57.895 9.30 0.00 0.00 4.09
7336 9747 2.489751 CCGGCGAAAATTGGGCTC 59.510 61.111 9.30 0.00 0.00 4.70
7337 9748 3.758931 GCCGGCGAAAATTGGGCT 61.759 61.111 12.58 0.00 40.59 5.19
7338 9749 3.699955 GAGCCGGCGAAAATTGGGC 62.700 63.158 23.20 0.00 44.07 5.36
7339 9750 2.489751 GAGCCGGCGAAAATTGGG 59.510 61.111 23.20 0.00 0.00 4.12
7340 9751 2.100216 CGAGCCGGCGAAAATTGG 59.900 61.111 23.20 0.00 0.00 3.16
7341 9752 2.100216 CCGAGCCGGCGAAAATTG 59.900 61.111 23.20 6.86 41.17 2.32
7342 9753 3.131478 CCCGAGCCGGCGAAAATT 61.131 61.111 23.20 0.68 46.86 1.82
7377 9788 4.710167 CGGGTTCGGGTTGGGTCC 62.710 72.222 0.00 0.00 0.00 4.46
7419 9830 1.799916 CAAAAACGATTCGCCCGGC 60.800 57.895 5.86 0.00 0.00 6.13
7420 9831 1.154112 CCAAAAACGATTCGCCCGG 60.154 57.895 5.86 0.00 0.00 5.73
7421 9832 1.799916 GCCAAAAACGATTCGCCCG 60.800 57.895 5.86 0.00 0.00 6.13
7422 9833 1.799916 CGCCAAAAACGATTCGCCC 60.800 57.895 5.86 0.00 0.00 6.13
7423 9834 2.433334 GCGCCAAAAACGATTCGCC 61.433 57.895 5.86 0.00 37.02 5.54
7424 9835 2.763929 CGCGCCAAAAACGATTCGC 61.764 57.895 5.86 0.00 39.26 4.70
7425 9836 0.723129 TTCGCGCCAAAAACGATTCG 60.723 50.000 0.00 4.14 35.48 3.34
7426 9837 0.974836 CTTCGCGCCAAAAACGATTC 59.025 50.000 0.00 0.00 35.48 2.52
7427 9838 0.589223 TCTTCGCGCCAAAAACGATT 59.411 45.000 0.00 0.00 35.48 3.34
7428 9839 0.165944 CTCTTCGCGCCAAAAACGAT 59.834 50.000 0.00 0.00 35.48 3.73
7429 9840 1.567537 CTCTTCGCGCCAAAAACGA 59.432 52.632 0.00 0.00 0.00 3.85
7430 9841 2.074920 GCTCTTCGCGCCAAAAACG 61.075 57.895 0.00 0.00 0.00 3.60
7431 9842 1.729484 GGCTCTTCGCGCCAAAAAC 60.729 57.895 0.00 0.00 46.77 2.43
7432 9843 2.642700 GGCTCTTCGCGCCAAAAA 59.357 55.556 0.00 0.00 46.77 1.94
7461 9872 0.027063 GAGAGTAGAGTCGCTGACGC 59.973 60.000 4.75 4.75 37.67 5.19
7462 9873 1.647346 AGAGAGTAGAGTCGCTGACG 58.353 55.000 3.62 0.00 37.67 4.35
7463 9874 3.267483 AGAAGAGAGTAGAGTCGCTGAC 58.733 50.000 1.15 1.15 0.00 3.51
7464 9875 3.527533 GAGAAGAGAGTAGAGTCGCTGA 58.472 50.000 0.00 0.00 0.00 4.26
7465 9876 2.284150 CGAGAAGAGAGTAGAGTCGCTG 59.716 54.545 0.00 0.00 0.00 5.18
7466 9877 2.546778 CGAGAAGAGAGTAGAGTCGCT 58.453 52.381 0.00 0.00 0.00 4.93
7467 9878 1.004292 GCGAGAAGAGAGTAGAGTCGC 60.004 57.143 0.00 0.00 43.71 5.19
7468 9879 1.595794 GGCGAGAAGAGAGTAGAGTCG 59.404 57.143 0.00 0.00 0.00 4.18
7469 9880 1.944709 GGGCGAGAAGAGAGTAGAGTC 59.055 57.143 0.00 0.00 0.00 3.36
7470 9881 1.409101 GGGGCGAGAAGAGAGTAGAGT 60.409 57.143 0.00 0.00 0.00 3.24
7471 9882 1.133915 AGGGGCGAGAAGAGAGTAGAG 60.134 57.143 0.00 0.00 0.00 2.43
7472 9883 0.920438 AGGGGCGAGAAGAGAGTAGA 59.080 55.000 0.00 0.00 0.00 2.59
7473 9884 1.679153 GAAGGGGCGAGAAGAGAGTAG 59.321 57.143 0.00 0.00 0.00 2.57
7474 9885 1.765230 GAAGGGGCGAGAAGAGAGTA 58.235 55.000 0.00 0.00 0.00 2.59
7475 9886 1.316706 CGAAGGGGCGAGAAGAGAGT 61.317 60.000 0.00 0.00 0.00 3.24
7476 9887 1.316706 ACGAAGGGGCGAGAAGAGAG 61.317 60.000 0.00 0.00 34.83 3.20
7477 9888 1.304217 ACGAAGGGGCGAGAAGAGA 60.304 57.895 0.00 0.00 34.83 3.10
7478 9889 1.139947 GACGAAGGGGCGAGAAGAG 59.860 63.158 0.00 0.00 34.83 2.85
7479 9890 2.697761 CGACGAAGGGGCGAGAAGA 61.698 63.158 0.00 0.00 34.83 2.87
7480 9891 2.202623 CGACGAAGGGGCGAGAAG 60.203 66.667 0.00 0.00 34.83 2.85
7481 9892 2.986306 GACGACGAAGGGGCGAGAA 61.986 63.158 0.00 0.00 34.83 2.87
7482 9893 3.437795 GACGACGAAGGGGCGAGA 61.438 66.667 0.00 0.00 34.83 4.04
7483 9894 4.493747 GGACGACGAAGGGGCGAG 62.494 72.222 0.00 0.00 34.83 5.03
7485 9896 4.493747 GAGGACGACGAAGGGGCG 62.494 72.222 0.00 0.00 37.29 6.13
7486 9897 2.630592 GATGAGGACGACGAAGGGGC 62.631 65.000 0.00 0.00 0.00 5.80
7487 9898 1.437986 GATGAGGACGACGAAGGGG 59.562 63.158 0.00 0.00 0.00 4.79
7488 9899 1.064296 CGATGAGGACGACGAAGGG 59.936 63.158 0.00 0.00 0.00 3.95
7489 9900 1.586564 GCGATGAGGACGACGAAGG 60.587 63.158 0.00 0.00 0.00 3.46
7490 9901 1.586564 GGCGATGAGGACGACGAAG 60.587 63.158 0.00 0.00 0.00 3.79
7491 9902 1.989966 GAGGCGATGAGGACGACGAA 61.990 60.000 0.00 0.00 44.04 3.85
7492 9903 2.437895 AGGCGATGAGGACGACGA 60.438 61.111 0.00 0.00 44.04 4.20
7493 9904 2.024871 GAGGCGATGAGGACGACG 59.975 66.667 0.00 0.00 44.04 5.12
7494 9905 2.024871 CGAGGCGATGAGGACGAC 59.975 66.667 0.00 0.00 39.24 4.34
7495 9906 1.592400 AAACGAGGCGATGAGGACGA 61.592 55.000 0.00 0.00 0.00 4.20
7496 9907 1.140407 GAAACGAGGCGATGAGGACG 61.140 60.000 0.00 0.00 0.00 4.79
7497 9908 0.806492 GGAAACGAGGCGATGAGGAC 60.806 60.000 0.00 0.00 0.00 3.85
7498 9909 1.515954 GGAAACGAGGCGATGAGGA 59.484 57.895 0.00 0.00 0.00 3.71
7499 9910 1.521681 GGGAAACGAGGCGATGAGG 60.522 63.158 0.00 0.00 0.00 3.86
7500 9911 4.110493 GGGAAACGAGGCGATGAG 57.890 61.111 0.00 0.00 0.00 2.90
7511 9922 3.122323 TGATTCGCCGCGGGAAAC 61.122 61.111 29.38 24.36 37.97 2.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.