Multiple sequence alignment - TraesCS3A01G191200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G191200 chr3A 100.000 4891 0 0 1 4891 241928309 241923419 0.000000e+00 9033
1 TraesCS3A01G191200 chr3A 81.871 171 27 4 4374 4541 159433335 159433166 1.840000e-29 141
2 TraesCS3A01G191200 chr3A 79.688 192 32 5 4361 4548 108744227 108744039 1.100000e-26 132
3 TraesCS3A01G191200 chr3D 95.133 4109 153 27 672 4764 188354175 188358252 0.000000e+00 6436
4 TraesCS3A01G191200 chr3D 84.956 339 36 10 336 668 188352132 188352461 3.650000e-86 329
5 TraesCS3A01G191200 chr3D 78.125 192 34 6 4361 4548 260598932 260598745 1.110000e-21 115
6 TraesCS3A01G191200 chr3B 94.156 3525 109 36 1265 4774 270887254 270890696 0.000000e+00 5278
7 TraesCS3A01G191200 chr3B 95.793 523 21 1 725 1247 270886746 270887267 0.000000e+00 843
8 TraesCS3A01G191200 chr3B 82.840 169 20 7 526 688 270886308 270886473 5.100000e-30 143
9 TraesCS3A01G191200 chr3B 96.296 81 3 0 1 81 674307652 674307732 3.070000e-27 134
10 TraesCS3A01G191200 chr3B 86.239 109 11 3 1 109 123269179 123269075 1.110000e-21 115
11 TraesCS3A01G191200 chr2D 85.648 216 30 1 80 294 16496643 16496858 4.930000e-55 226
12 TraesCS3A01G191200 chr6B 79.703 202 39 2 4348 4548 347219513 347219713 1.420000e-30 145
13 TraesCS3A01G191200 chr6B 79.688 192 32 7 4362 4548 636485853 636486042 1.100000e-26 132
14 TraesCS3A01G191200 chr2B 96.341 82 3 0 1 82 482926788 482926869 8.540000e-28 135
15 TraesCS3A01G191200 chr2B 96.296 81 3 0 1 81 144240685 144240765 3.070000e-27 134
16 TraesCS3A01G191200 chr2A 96.341 82 3 0 1 82 106767144 106767225 8.540000e-28 135
17 TraesCS3A01G191200 chr6D 96.296 81 3 0 1 81 118998 118918 3.070000e-27 134
18 TraesCS3A01G191200 chr6D 96.296 81 3 0 1 81 249998862 249998782 3.070000e-27 134
19 TraesCS3A01G191200 chr6A 95.181 83 4 0 1 83 605566499 605566417 1.100000e-26 132
20 TraesCS3A01G191200 chr5D 79.474 190 33 5 4363 4548 5560885 5561072 3.970000e-26 130
21 TraesCS3A01G191200 chr1B 89.109 101 9 2 1 100 199467288 199467387 1.850000e-24 124
22 TraesCS3A01G191200 chr1D 86.792 106 13 1 4378 4482 309073116 309073221 3.090000e-22 117
23 TraesCS3A01G191200 chr5A 79.310 174 27 7 4366 4533 6629230 6629060 4.000000e-21 113


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G191200 chr3A 241923419 241928309 4890 True 9033.0 9033 100.000000 1 4891 1 chr3A.!!$R3 4890
1 TraesCS3A01G191200 chr3D 188352132 188358252 6120 False 3382.5 6436 90.044500 336 4764 2 chr3D.!!$F1 4428
2 TraesCS3A01G191200 chr3B 270886308 270890696 4388 False 2088.0 5278 90.929667 526 4774 3 chr3B.!!$F2 4248

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
503 505 0.032952 TGTGTGACCGACAAGTAGGC 59.967 55.000 0.00 0.00 35.91 3.93 F
511 513 0.247735 CGACAAGTAGGCTCGAGACG 60.248 60.000 18.75 1.95 0.00 4.18 F
524 526 0.731417 CGAGACGATGACCCTAACGT 59.269 55.000 0.00 0.00 41.57 3.99 F
564 566 1.070909 CGCGTTGGTTTCCAAAAATGC 60.071 47.619 0.00 4.94 45.73 3.56 F
1371 3332 1.087501 GAAATCGCAGTTCTCACCCC 58.912 55.000 0.00 0.00 0.00 4.95 F
2717 4688 0.454957 CTTCGCGCCTTGATTTGGTG 60.455 55.000 0.00 0.00 38.07 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1673 3637 0.818040 AACTCCGGACACTTGCAACC 60.818 55.000 0.0 0.0 0.00 3.77 R
1741 3705 1.510480 GCAACCCTGCTCACAGTGTC 61.510 60.000 0.0 0.0 45.74 3.67 R
1808 3772 1.817099 CCAGCCAGATGAGAACGGC 60.817 63.158 0.0 0.0 45.23 5.68 R
1860 3824 2.624838 CCTTGTCACCAGAATTTGCACT 59.375 45.455 0.0 0.0 0.00 4.40 R
3060 5031 2.391616 TCTGCTTGCATCGACTCAAT 57.608 45.000 0.0 0.0 0.00 2.57 R
4300 6277 1.601166 AGGTTGTACCAAAGGAACGC 58.399 50.000 0.0 0.0 41.95 4.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.932207 AGTTTCATTCAAATCATGCAAATTAGA 57.068 25.926 0.00 0.00 0.00 2.10
28 29 9.932207 TTTCATTCAAATCATGCAAATTAGAGT 57.068 25.926 0.00 0.00 0.00 3.24
29 30 9.577110 TTCATTCAAATCATGCAAATTAGAGTC 57.423 29.630 0.00 0.00 0.00 3.36
30 31 8.192774 TCATTCAAATCATGCAAATTAGAGTCC 58.807 33.333 0.00 0.00 0.00 3.85
31 32 7.465353 TTCAAATCATGCAAATTAGAGTCCA 57.535 32.000 0.00 0.00 0.00 4.02
32 33 7.465353 TCAAATCATGCAAATTAGAGTCCAA 57.535 32.000 0.00 0.00 0.00 3.53
33 34 7.894708 TCAAATCATGCAAATTAGAGTCCAAA 58.105 30.769 0.00 0.00 0.00 3.28
34 35 8.366401 TCAAATCATGCAAATTAGAGTCCAAAA 58.634 29.630 0.00 0.00 0.00 2.44
35 36 9.158233 CAAATCATGCAAATTAGAGTCCAAAAT 57.842 29.630 0.00 0.00 0.00 1.82
39 40 9.241919 TCATGCAAATTAGAGTCCAAAATAAGA 57.758 29.630 0.00 0.00 0.00 2.10
40 41 9.512435 CATGCAAATTAGAGTCCAAAATAAGAG 57.488 33.333 0.00 0.00 0.00 2.85
41 42 7.538575 TGCAAATTAGAGTCCAAAATAAGAGC 58.461 34.615 0.00 0.00 0.00 4.09
42 43 7.176515 TGCAAATTAGAGTCCAAAATAAGAGCA 59.823 33.333 0.00 0.00 0.00 4.26
43 44 8.028938 GCAAATTAGAGTCCAAAATAAGAGCAA 58.971 33.333 0.00 0.00 0.00 3.91
44 45 9.912634 CAAATTAGAGTCCAAAATAAGAGCAAA 57.087 29.630 0.00 0.00 0.00 3.68
47 48 8.691661 TTAGAGTCCAAAATAAGAGCAAAAGT 57.308 30.769 0.00 0.00 0.00 2.66
48 49 6.974965 AGAGTCCAAAATAAGAGCAAAAGTG 58.025 36.000 0.00 0.00 0.00 3.16
49 50 6.547510 AGAGTCCAAAATAAGAGCAAAAGTGT 59.452 34.615 0.00 0.00 0.00 3.55
50 51 7.068716 AGAGTCCAAAATAAGAGCAAAAGTGTT 59.931 33.333 0.00 0.00 0.00 3.32
51 52 7.203218 AGTCCAAAATAAGAGCAAAAGTGTTC 58.797 34.615 0.00 0.00 35.33 3.18
52 53 6.142320 GTCCAAAATAAGAGCAAAAGTGTTCG 59.858 38.462 0.00 0.00 39.78 3.95
53 54 5.402270 CCAAAATAAGAGCAAAAGTGTTCGG 59.598 40.000 0.00 0.00 39.78 4.30
54 55 6.205784 CAAAATAAGAGCAAAAGTGTTCGGA 58.794 36.000 0.00 0.00 39.78 4.55
55 56 6.385649 AAATAAGAGCAAAAGTGTTCGGAA 57.614 33.333 0.00 0.00 39.78 4.30
56 57 6.385649 AATAAGAGCAAAAGTGTTCGGAAA 57.614 33.333 0.00 0.00 39.78 3.13
57 58 4.712122 AAGAGCAAAAGTGTTCGGAAAA 57.288 36.364 0.00 0.00 39.78 2.29
58 59 4.712122 AGAGCAAAAGTGTTCGGAAAAA 57.288 36.364 0.00 0.00 39.78 1.94
59 60 5.262588 AGAGCAAAAGTGTTCGGAAAAAT 57.737 34.783 0.00 0.00 39.78 1.82
60 61 6.385649 AGAGCAAAAGTGTTCGGAAAAATA 57.614 33.333 0.00 0.00 39.78 1.40
61 62 6.438763 AGAGCAAAAGTGTTCGGAAAAATAG 58.561 36.000 0.00 0.00 39.78 1.73
62 63 6.262273 AGAGCAAAAGTGTTCGGAAAAATAGA 59.738 34.615 0.00 0.00 39.78 1.98
63 64 6.981722 AGCAAAAGTGTTCGGAAAAATAGAT 58.018 32.000 0.00 0.00 0.00 1.98
64 65 8.106247 AGCAAAAGTGTTCGGAAAAATAGATA 57.894 30.769 0.00 0.00 0.00 1.98
65 66 8.021396 AGCAAAAGTGTTCGGAAAAATAGATAC 58.979 33.333 0.00 0.00 0.00 2.24
66 67 7.007099 GCAAAAGTGTTCGGAAAAATAGATACG 59.993 37.037 0.00 0.00 0.00 3.06
67 68 7.894376 AAAGTGTTCGGAAAAATAGATACGA 57.106 32.000 0.00 0.00 0.00 3.43
68 69 6.882458 AGTGTTCGGAAAAATAGATACGAC 57.118 37.500 0.00 0.00 0.00 4.34
69 70 5.514204 AGTGTTCGGAAAAATAGATACGACG 59.486 40.000 0.00 0.00 0.00 5.12
70 71 5.512788 GTGTTCGGAAAAATAGATACGACGA 59.487 40.000 0.00 0.00 0.00 4.20
71 72 6.033831 GTGTTCGGAAAAATAGATACGACGAA 59.966 38.462 0.00 0.00 35.76 3.85
72 73 6.252015 TGTTCGGAAAAATAGATACGACGAAG 59.748 38.462 0.00 0.00 38.30 3.79
73 74 6.122850 TCGGAAAAATAGATACGACGAAGA 57.877 37.500 0.00 0.00 0.00 2.87
74 75 5.967674 TCGGAAAAATAGATACGACGAAGAC 59.032 40.000 0.00 0.00 0.00 3.01
87 88 1.811428 CGAAGACGTATCAGACCACG 58.189 55.000 5.10 5.10 43.63 4.94
88 89 1.395954 CGAAGACGTATCAGACCACGA 59.604 52.381 12.25 0.00 40.56 4.35
89 90 2.783333 GAAGACGTATCAGACCACGAC 58.217 52.381 12.25 6.98 40.56 4.34
90 91 2.110901 AGACGTATCAGACCACGACT 57.889 50.000 12.25 8.88 40.56 4.18
91 92 2.008329 AGACGTATCAGACCACGACTC 58.992 52.381 12.25 2.30 38.45 3.36
92 93 0.725686 ACGTATCAGACCACGACTCG 59.274 55.000 12.25 0.00 40.56 4.18
93 94 1.004595 CGTATCAGACCACGACTCGA 58.995 55.000 5.20 0.00 40.56 4.04
94 95 1.004821 CGTATCAGACCACGACTCGAG 60.005 57.143 11.84 11.84 40.56 4.04
95 96 1.015109 TATCAGACCACGACTCGAGC 58.985 55.000 13.61 4.47 0.00 5.03
96 97 0.960861 ATCAGACCACGACTCGAGCA 60.961 55.000 13.61 0.00 0.00 4.26
97 98 0.960861 TCAGACCACGACTCGAGCAT 60.961 55.000 13.61 0.00 0.00 3.79
98 99 0.799917 CAGACCACGACTCGAGCATG 60.800 60.000 13.61 8.26 0.00 4.06
99 100 2.125912 ACCACGACTCGAGCATGC 60.126 61.111 13.61 10.51 0.00 4.06
100 101 2.125952 CCACGACTCGAGCATGCA 60.126 61.111 21.98 0.00 0.00 3.96
101 102 2.447887 CCACGACTCGAGCATGCAC 61.448 63.158 21.98 13.43 0.00 4.57
102 103 2.125912 ACGACTCGAGCATGCACC 60.126 61.111 21.98 10.27 0.00 5.01
103 104 2.125952 CGACTCGAGCATGCACCA 60.126 61.111 21.98 0.37 0.00 4.17
104 105 2.447887 CGACTCGAGCATGCACCAC 61.448 63.158 21.98 7.26 0.00 4.16
105 106 1.374631 GACTCGAGCATGCACCACA 60.375 57.895 21.98 0.00 0.00 4.17
106 107 1.630244 GACTCGAGCATGCACCACAC 61.630 60.000 21.98 3.32 0.00 3.82
107 108 2.733671 CTCGAGCATGCACCACACG 61.734 63.158 21.98 14.37 0.00 4.49
108 109 2.738139 CGAGCATGCACCACACGA 60.738 61.111 21.98 0.00 0.00 4.35
109 110 2.863153 GAGCATGCACCACACGAC 59.137 61.111 21.98 0.00 0.00 4.34
110 111 1.960763 GAGCATGCACCACACGACA 60.961 57.895 21.98 0.00 0.00 4.35
111 112 1.506309 GAGCATGCACCACACGACAA 61.506 55.000 21.98 0.00 0.00 3.18
112 113 0.890542 AGCATGCACCACACGACAAT 60.891 50.000 21.98 0.00 0.00 2.71
113 114 0.730155 GCATGCACCACACGACAATG 60.730 55.000 14.21 0.00 0.00 2.82
114 115 0.109643 CATGCACCACACGACAATGG 60.110 55.000 0.00 0.00 42.13 3.16
115 116 1.865788 ATGCACCACACGACAATGGC 61.866 55.000 0.00 0.00 39.84 4.40
116 117 2.551006 GCACCACACGACAATGGCA 61.551 57.895 0.00 0.00 39.84 4.92
117 118 2.028936 CACCACACGACAATGGCAA 58.971 52.632 0.00 0.00 39.84 4.52
118 119 0.317770 CACCACACGACAATGGCAAC 60.318 55.000 0.00 0.00 39.84 4.17
119 120 1.285641 CCACACGACAATGGCAACC 59.714 57.895 0.00 0.00 0.00 3.77
120 121 1.451337 CCACACGACAATGGCAACCA 61.451 55.000 0.00 0.00 38.19 3.67
121 122 0.317770 CACACGACAATGGCAACCAC 60.318 55.000 0.00 0.00 35.80 4.16
122 123 0.749818 ACACGACAATGGCAACCACA 60.750 50.000 0.00 0.00 35.80 4.17
123 124 0.040157 CACGACAATGGCAACCACAG 60.040 55.000 0.00 0.00 35.80 3.66
124 125 1.172180 ACGACAATGGCAACCACAGG 61.172 55.000 0.00 0.00 35.80 4.00
125 126 1.290009 GACAATGGCAACCACAGGC 59.710 57.895 0.00 0.00 35.80 4.85
126 127 1.457267 ACAATGGCAACCACAGGCA 60.457 52.632 0.00 0.00 45.98 4.75
127 128 1.005867 CAATGGCAACCACAGGCAC 60.006 57.895 0.00 0.00 44.68 5.01
128 129 1.457267 AATGGCAACCACAGGCACA 60.457 52.632 0.00 0.00 44.68 4.57
129 130 1.747325 AATGGCAACCACAGGCACAC 61.747 55.000 0.00 0.00 44.68 3.82
130 131 3.605664 GGCAACCACAGGCACACC 61.606 66.667 0.00 0.00 0.00 4.16
131 132 3.605664 GCAACCACAGGCACACCC 61.606 66.667 0.00 0.00 36.11 4.61
133 134 1.455587 CAACCACAGGCACACCCTT 60.456 57.895 0.00 0.00 43.06 3.95
134 135 1.455587 AACCACAGGCACACCCTTG 60.456 57.895 0.00 0.00 43.06 3.61
135 136 3.297620 CCACAGGCACACCCTTGC 61.298 66.667 0.00 0.00 43.06 4.01
144 145 4.323477 CACCCTTGCCGTCCGGAA 62.323 66.667 5.23 0.00 37.50 4.30
145 146 4.324991 ACCCTTGCCGTCCGGAAC 62.325 66.667 5.23 0.00 37.50 3.62
146 147 4.323477 CCCTTGCCGTCCGGAACA 62.323 66.667 5.23 1.49 37.50 3.18
147 148 3.047877 CCTTGCCGTCCGGAACAC 61.048 66.667 5.23 0.00 37.50 3.32
148 149 2.280524 CTTGCCGTCCGGAACACA 60.281 61.111 5.23 0.59 37.50 3.72
149 150 2.589442 TTGCCGTCCGGAACACAC 60.589 61.111 5.23 0.00 37.50 3.82
150 151 4.953868 TGCCGTCCGGAACACACG 62.954 66.667 5.23 5.52 37.50 4.49
151 152 4.651008 GCCGTCCGGAACACACGA 62.651 66.667 5.23 0.00 35.34 4.35
152 153 2.027897 CCGTCCGGAACACACGAA 59.972 61.111 5.23 0.00 35.34 3.85
153 154 2.305127 CCGTCCGGAACACACGAAC 61.305 63.158 5.23 0.00 35.34 3.95
154 155 2.305127 CGTCCGGAACACACGAACC 61.305 63.158 5.23 0.00 35.34 3.62
155 156 1.068585 GTCCGGAACACACGAACCT 59.931 57.895 5.23 0.00 0.00 3.50
156 157 0.531311 GTCCGGAACACACGAACCTT 60.531 55.000 5.23 0.00 0.00 3.50
157 158 0.249573 TCCGGAACACACGAACCTTC 60.250 55.000 0.00 0.00 0.00 3.46
158 159 0.249741 CCGGAACACACGAACCTTCT 60.250 55.000 0.00 0.00 0.00 2.85
159 160 1.137513 CGGAACACACGAACCTTCTC 58.862 55.000 0.00 0.00 0.00 2.87
160 161 1.537348 CGGAACACACGAACCTTCTCA 60.537 52.381 0.00 0.00 0.00 3.27
161 162 1.865340 GGAACACACGAACCTTCTCAC 59.135 52.381 0.00 0.00 0.00 3.51
162 163 1.865340 GAACACACGAACCTTCTCACC 59.135 52.381 0.00 0.00 0.00 4.02
163 164 0.106149 ACACACGAACCTTCTCACCC 59.894 55.000 0.00 0.00 0.00 4.61
164 165 0.393077 CACACGAACCTTCTCACCCT 59.607 55.000 0.00 0.00 0.00 4.34
165 166 0.680061 ACACGAACCTTCTCACCCTC 59.320 55.000 0.00 0.00 0.00 4.30
166 167 0.037232 CACGAACCTTCTCACCCTCC 60.037 60.000 0.00 0.00 0.00 4.30
167 168 0.178929 ACGAACCTTCTCACCCTCCT 60.179 55.000 0.00 0.00 0.00 3.69
168 169 0.977395 CGAACCTTCTCACCCTCCTT 59.023 55.000 0.00 0.00 0.00 3.36
169 170 1.338200 CGAACCTTCTCACCCTCCTTG 60.338 57.143 0.00 0.00 0.00 3.61
170 171 1.978580 GAACCTTCTCACCCTCCTTGA 59.021 52.381 0.00 0.00 0.00 3.02
171 172 2.118403 ACCTTCTCACCCTCCTTGAA 57.882 50.000 0.00 0.00 0.00 2.69
172 173 1.700186 ACCTTCTCACCCTCCTTGAAC 59.300 52.381 0.00 0.00 0.00 3.18
173 174 1.981495 CCTTCTCACCCTCCTTGAACT 59.019 52.381 0.00 0.00 0.00 3.01
174 175 2.289945 CCTTCTCACCCTCCTTGAACTG 60.290 54.545 0.00 0.00 0.00 3.16
175 176 0.687354 TCTCACCCTCCTTGAACTGC 59.313 55.000 0.00 0.00 0.00 4.40
176 177 0.689623 CTCACCCTCCTTGAACTGCT 59.310 55.000 0.00 0.00 0.00 4.24
177 178 1.072965 CTCACCCTCCTTGAACTGCTT 59.927 52.381 0.00 0.00 0.00 3.91
178 179 1.202806 TCACCCTCCTTGAACTGCTTG 60.203 52.381 0.00 0.00 0.00 4.01
179 180 1.140312 ACCCTCCTTGAACTGCTTGA 58.860 50.000 0.00 0.00 0.00 3.02
180 181 1.072965 ACCCTCCTTGAACTGCTTGAG 59.927 52.381 0.00 0.00 0.00 3.02
181 182 1.163554 CCTCCTTGAACTGCTTGAGC 58.836 55.000 0.00 0.00 42.50 4.26
191 192 2.747855 GCTTGAGCAACCCCCTCG 60.748 66.667 0.00 0.00 41.59 4.63
192 193 2.747855 CTTGAGCAACCCCCTCGC 60.748 66.667 0.00 0.00 31.98 5.03
193 194 4.697756 TTGAGCAACCCCCTCGCG 62.698 66.667 0.00 0.00 31.98 5.87
197 198 4.778143 GCAACCCCCTCGCGTGAT 62.778 66.667 10.21 0.00 0.00 3.06
198 199 2.046314 CAACCCCCTCGCGTGATT 60.046 61.111 10.21 0.00 0.00 2.57
199 200 2.106683 CAACCCCCTCGCGTGATTC 61.107 63.158 10.21 0.00 0.00 2.52
200 201 2.589157 AACCCCCTCGCGTGATTCA 61.589 57.895 10.21 0.00 0.00 2.57
201 202 2.511600 CCCCCTCGCGTGATTCAC 60.512 66.667 10.21 6.73 0.00 3.18
213 214 3.658351 GTGATTCACGAGCAATGGTAC 57.342 47.619 0.13 0.00 0.00 3.34
214 215 2.029244 GTGATTCACGAGCAATGGTACG 59.971 50.000 0.13 0.00 0.00 3.67
215 216 1.004927 GATTCACGAGCAATGGTACGC 60.005 52.381 0.00 0.00 0.00 4.42
216 217 0.037697 TTCACGAGCAATGGTACGCT 60.038 50.000 0.00 0.00 42.42 5.07
219 220 4.496670 GAGCAATGGTACGCTCGT 57.503 55.556 4.97 0.00 44.68 4.18
220 221 1.999051 GAGCAATGGTACGCTCGTG 59.001 57.895 5.05 0.00 44.68 4.35
221 222 0.457853 GAGCAATGGTACGCTCGTGA 60.458 55.000 5.05 0.00 44.68 4.35
222 223 0.037697 AGCAATGGTACGCTCGTGAA 60.038 50.000 5.05 0.00 31.16 3.18
223 224 0.094730 GCAATGGTACGCTCGTGAAC 59.905 55.000 5.05 0.00 0.00 3.18
224 225 0.719465 CAATGGTACGCTCGTGAACC 59.281 55.000 5.05 6.32 0.00 3.62
225 226 0.734942 AATGGTACGCTCGTGAACCG 60.735 55.000 5.05 0.00 31.26 4.44
226 227 2.505557 GGTACGCTCGTGAACCGG 60.506 66.667 0.00 0.00 37.11 5.28
227 228 2.505557 GTACGCTCGTGAACCGGG 60.506 66.667 6.32 0.00 41.15 5.73
232 233 2.885644 CTCGTGAACCGGGCGATG 60.886 66.667 6.32 0.00 37.11 3.84
233 234 3.350909 CTCGTGAACCGGGCGATGA 62.351 63.158 6.32 0.00 37.11 2.92
234 235 2.202878 CGTGAACCGGGCGATGAT 60.203 61.111 6.32 0.00 0.00 2.45
235 236 2.237751 CGTGAACCGGGCGATGATC 61.238 63.158 6.32 0.00 0.00 2.92
236 237 1.144057 GTGAACCGGGCGATGATCT 59.856 57.895 6.32 0.00 0.00 2.75
237 238 0.876342 GTGAACCGGGCGATGATCTC 60.876 60.000 6.32 0.00 0.00 2.75
245 246 4.328231 CGATGATCTCGCGGGCGA 62.328 66.667 15.55 15.55 46.87 5.54
258 259 3.195698 GGCGATGGCGACCTTGAC 61.196 66.667 0.00 0.00 40.51 3.18
259 260 3.195698 GCGATGGCGACCTTGACC 61.196 66.667 0.00 0.00 40.82 4.02
260 261 2.885644 CGATGGCGACCTTGACCG 60.886 66.667 0.00 0.00 40.82 4.79
261 262 2.511600 GATGGCGACCTTGACCGG 60.512 66.667 0.00 0.00 0.00 5.28
262 263 3.000819 ATGGCGACCTTGACCGGA 61.001 61.111 9.46 0.00 0.00 5.14
263 264 2.311688 GATGGCGACCTTGACCGGAT 62.312 60.000 9.46 0.00 0.00 4.18
264 265 2.202892 GGCGACCTTGACCGGATC 60.203 66.667 9.46 2.18 0.00 3.36
265 266 2.582498 GCGACCTTGACCGGATCG 60.582 66.667 9.46 8.49 33.63 3.69
280 281 2.967397 TCGGTGCCGACCTAGTTG 59.033 61.111 9.48 0.00 44.01 3.16
281 282 1.904865 TCGGTGCCGACCTAGTTGT 60.905 57.895 9.48 0.00 44.01 3.32
282 283 1.445582 CGGTGCCGACCTAGTTGTC 60.446 63.158 4.35 0.00 40.58 3.18
291 292 3.802948 GACCTAGTTGTCGACCATCAT 57.197 47.619 14.12 0.00 0.00 2.45
292 293 3.707793 GACCTAGTTGTCGACCATCATC 58.292 50.000 14.12 0.00 0.00 2.92
293 294 3.366396 ACCTAGTTGTCGACCATCATCT 58.634 45.455 14.12 1.46 0.00 2.90
294 295 3.769844 ACCTAGTTGTCGACCATCATCTT 59.230 43.478 14.12 0.00 0.00 2.40
295 296 4.142138 ACCTAGTTGTCGACCATCATCTTC 60.142 45.833 14.12 0.00 0.00 2.87
296 297 3.252974 AGTTGTCGACCATCATCTTCC 57.747 47.619 14.12 0.00 0.00 3.46
297 298 2.567169 AGTTGTCGACCATCATCTTCCA 59.433 45.455 14.12 0.00 0.00 3.53
298 299 3.198635 AGTTGTCGACCATCATCTTCCAT 59.801 43.478 14.12 0.00 0.00 3.41
299 300 4.405680 AGTTGTCGACCATCATCTTCCATA 59.594 41.667 14.12 0.00 0.00 2.74
300 301 4.322080 TGTCGACCATCATCTTCCATAC 57.678 45.455 14.12 0.00 0.00 2.39
301 302 3.704061 TGTCGACCATCATCTTCCATACA 59.296 43.478 14.12 0.00 0.00 2.29
302 303 4.344968 TGTCGACCATCATCTTCCATACAT 59.655 41.667 14.12 0.00 0.00 2.29
303 304 5.163311 TGTCGACCATCATCTTCCATACATT 60.163 40.000 14.12 0.00 0.00 2.71
304 305 5.178252 GTCGACCATCATCTTCCATACATTG 59.822 44.000 3.51 0.00 0.00 2.82
306 307 5.380043 GACCATCATCTTCCATACATTGGT 58.620 41.667 0.00 0.00 46.52 3.67
307 308 5.380043 ACCATCATCTTCCATACATTGGTC 58.620 41.667 0.00 0.00 46.52 4.02
308 309 5.133322 ACCATCATCTTCCATACATTGGTCT 59.867 40.000 0.00 0.00 46.52 3.85
309 310 6.066690 CCATCATCTTCCATACATTGGTCTT 58.933 40.000 0.00 0.00 46.52 3.01
310 311 6.206243 CCATCATCTTCCATACATTGGTCTTC 59.794 42.308 0.00 0.00 46.52 2.87
311 312 5.359756 TCATCTTCCATACATTGGTCTTCG 58.640 41.667 0.00 0.00 46.52 3.79
312 313 3.531538 TCTTCCATACATTGGTCTTCGC 58.468 45.455 0.00 0.00 46.52 4.70
313 314 2.325583 TCCATACATTGGTCTTCGCC 57.674 50.000 0.00 0.00 46.52 5.54
314 315 1.557371 TCCATACATTGGTCTTCGCCA 59.443 47.619 0.00 0.00 46.52 5.69
315 316 2.172505 TCCATACATTGGTCTTCGCCAT 59.827 45.455 0.00 0.00 46.52 4.40
316 317 2.951642 CCATACATTGGTCTTCGCCATT 59.048 45.455 0.00 0.00 40.99 3.16
317 318 3.243168 CCATACATTGGTCTTCGCCATTG 60.243 47.826 0.00 0.00 42.44 2.82
318 319 1.176527 ACATTGGTCTTCGCCATTGG 58.823 50.000 0.00 0.00 41.58 3.16
319 320 0.179129 CATTGGTCTTCGCCATTGGC 60.179 55.000 18.10 18.10 46.75 4.52
352 353 3.621682 TGGTTGGTTGGTTAGGGATTT 57.378 42.857 0.00 0.00 0.00 2.17
357 358 4.733077 TGGTTGGTTAGGGATTTGAGAA 57.267 40.909 0.00 0.00 0.00 2.87
367 368 5.937975 AGGGATTTGAGAAAGAGAGAGAG 57.062 43.478 0.00 0.00 0.00 3.20
368 369 5.588845 AGGGATTTGAGAAAGAGAGAGAGA 58.411 41.667 0.00 0.00 0.00 3.10
369 370 5.658190 AGGGATTTGAGAAAGAGAGAGAGAG 59.342 44.000 0.00 0.00 0.00 3.20
370 371 5.656416 GGGATTTGAGAAAGAGAGAGAGAGA 59.344 44.000 0.00 0.00 0.00 3.10
371 372 6.183360 GGGATTTGAGAAAGAGAGAGAGAGAG 60.183 46.154 0.00 0.00 0.00 3.20
372 373 6.603201 GGATTTGAGAAAGAGAGAGAGAGAGA 59.397 42.308 0.00 0.00 0.00 3.10
373 374 7.286316 GGATTTGAGAAAGAGAGAGAGAGAGAT 59.714 40.741 0.00 0.00 0.00 2.75
392 393 3.392947 AGATGAGGGTGATAGAGACGAGA 59.607 47.826 0.00 0.00 0.00 4.04
403 404 1.076632 AGACGAGAAGGGAGGCGAT 60.077 57.895 0.00 0.00 0.00 4.58
446 448 0.832135 GAGTGGTGGAGTGGAGGTGA 60.832 60.000 0.00 0.00 0.00 4.02
460 462 4.816925 GTGGAGGTGACTATTGAATAAGGC 59.183 45.833 0.00 0.00 44.43 4.35
461 463 4.141482 TGGAGGTGACTATTGAATAAGGCC 60.141 45.833 0.00 0.00 44.43 5.19
481 483 0.232303 GCGGCGATTTGATTACTCGG 59.768 55.000 12.98 0.00 33.17 4.63
484 486 0.928229 GCGATTTGATTACTCGGCGT 59.072 50.000 6.85 0.00 33.17 5.68
490 492 0.599060 TGATTACTCGGCGTGTGTGA 59.401 50.000 23.24 10.44 0.00 3.58
500 502 0.595567 GCGTGTGTGACCGACAAGTA 60.596 55.000 0.00 0.00 35.91 2.24
503 505 0.032952 TGTGTGACCGACAAGTAGGC 59.967 55.000 0.00 0.00 35.91 3.93
504 506 0.317479 GTGTGACCGACAAGTAGGCT 59.683 55.000 0.00 0.00 35.91 4.58
511 513 0.247735 CGACAAGTAGGCTCGAGACG 60.248 60.000 18.75 1.95 0.00 4.18
513 515 1.671845 GACAAGTAGGCTCGAGACGAT 59.328 52.381 18.75 0.00 34.61 3.73
521 523 1.022735 GCTCGAGACGATGACCCTAA 58.977 55.000 18.75 0.00 34.61 2.69
524 526 0.731417 CGAGACGATGACCCTAACGT 59.269 55.000 0.00 0.00 41.57 3.99
564 566 1.070909 CGCGTTGGTTTCCAAAAATGC 60.071 47.619 0.00 4.94 45.73 3.56
569 571 2.035632 TGGTTTCCAAAAATGCGAGGT 58.964 42.857 0.00 0.00 0.00 3.85
576 578 2.134346 CAAAAATGCGAGGTGGGTTTG 58.866 47.619 0.00 0.00 0.00 2.93
578 580 1.112315 AAATGCGAGGTGGGTTTGCA 61.112 50.000 0.00 0.00 39.17 4.08
585 587 2.482839 CGAGGTGGGTTTGCACAAAAAT 60.483 45.455 0.00 0.00 31.33 1.82
598 610 1.604755 ACAAAAATGCGGCGACACTAA 59.395 42.857 12.98 0.00 0.00 2.24
600 612 3.046390 CAAAAATGCGGCGACACTAAAA 58.954 40.909 12.98 0.00 0.00 1.52
610 622 1.600164 CGACACTAAAACGACGGACCA 60.600 52.381 0.00 0.00 0.00 4.02
613 625 3.469739 ACACTAAAACGACGGACCAATT 58.530 40.909 0.00 0.00 0.00 2.32
614 626 3.249080 ACACTAAAACGACGGACCAATTG 59.751 43.478 0.00 0.00 0.00 2.32
615 627 3.495377 CACTAAAACGACGGACCAATTGA 59.505 43.478 7.12 0.00 0.00 2.57
616 628 3.744426 ACTAAAACGACGGACCAATTGAG 59.256 43.478 7.12 0.00 0.00 3.02
617 629 2.536761 AAACGACGGACCAATTGAGA 57.463 45.000 7.12 0.00 0.00 3.27
618 630 2.762535 AACGACGGACCAATTGAGAT 57.237 45.000 7.12 0.00 0.00 2.75
630 642 3.338249 CAATTGAGATGAGGTGACCGTT 58.662 45.455 0.00 0.00 0.00 4.44
631 643 2.743636 TTGAGATGAGGTGACCGTTC 57.256 50.000 0.00 0.00 0.00 3.95
723 2445 2.361757 CCAAAGTGTTGCACATGAAGGA 59.638 45.455 0.00 0.00 36.74 3.36
744 2702 5.181433 AGGAAGAAAAGTGTAATTTCTCCGC 59.819 40.000 2.35 0.00 44.22 5.54
997 2955 2.745884 CAATCTCCCGTGCCGCAA 60.746 61.111 0.00 0.00 0.00 4.85
1153 3114 7.526142 TCCATTAGCTCAGTATATTTCGTCT 57.474 36.000 0.00 0.00 0.00 4.18
1183 3144 2.279136 CGACGCCAGTTAAATCTCTTCG 59.721 50.000 0.00 0.00 0.00 3.79
1236 3197 1.863662 CGTACTAGCGCGATCCCCAT 61.864 60.000 12.10 0.00 0.00 4.00
1341 3302 5.360714 TGGGTTCATTTATTCCTTGATCTGC 59.639 40.000 0.00 0.00 0.00 4.26
1371 3332 1.087501 GAAATCGCAGTTCTCACCCC 58.912 55.000 0.00 0.00 0.00 4.95
1376 3337 1.668151 GCAGTTCTCACCCCGACAC 60.668 63.158 0.00 0.00 0.00 3.67
1468 3431 5.892160 TCTTTCTGATGCTTGATTGAAGG 57.108 39.130 0.00 0.00 31.56 3.46
1518 3481 3.913509 TGATGTCCAATTATGTGCCCAT 58.086 40.909 0.00 0.00 34.97 4.00
1582 3546 2.038295 GGCTGCTTGCTCAGGACTATAT 59.962 50.000 0.00 0.00 42.39 0.86
1589 3553 5.121454 GCTTGCTCAGGACTATATAACATGC 59.879 44.000 0.00 0.00 0.00 4.06
1634 3598 9.350951 AGTTTAATTCTGTTAACTGGTTTAGCT 57.649 29.630 12.00 0.00 30.17 3.32
1689 3653 1.227823 CAGGTTGCAAGTGTCCGGA 60.228 57.895 0.00 0.00 0.00 5.14
1725 3689 6.404403 CCTTGACGTACTTCTAAGTGCTGATA 60.404 42.308 5.62 0.00 39.16 2.15
1741 3705 4.805719 TGCTGATACTAAGAATGCAGAACG 59.194 41.667 0.00 0.00 0.00 3.95
1808 3772 2.669569 CCACCAGCCTGTCGGTTG 60.670 66.667 0.00 0.00 40.84 3.77
1831 3795 1.211457 GTTCTCATCTGGCTGGTCCAT 59.789 52.381 0.00 0.00 45.50 3.41
1860 3824 7.023171 AGTAGGAGTTTCTCTTCTCAGACTA 57.977 40.000 0.00 0.00 33.40 2.59
1913 3877 2.418884 GGAGGACGGGTTTTCTGATCTC 60.419 54.545 0.00 0.00 0.00 2.75
1922 3886 2.924290 GTTTTCTGATCTCGAGGTTCCG 59.076 50.000 13.56 6.95 0.00 4.30
2059 4023 0.915364 ATGAAGAAGGCCTCCCAGTC 59.085 55.000 5.23 0.00 0.00 3.51
2245 4209 6.981722 ACTTTTGCCCTGTATAACTTTTCTG 58.018 36.000 0.00 0.00 0.00 3.02
2253 4217 8.613482 GCCCTGTATAACTTTTCTGTCTATTTC 58.387 37.037 0.00 0.00 0.00 2.17
2273 4237 6.684897 TTTCCCCATGATTGTGAATTCTTT 57.315 33.333 7.05 0.00 0.00 2.52
2422 4388 6.431198 TCTTCAAACCATTTATAGAACGCC 57.569 37.500 0.00 0.00 0.00 5.68
2717 4688 0.454957 CTTCGCGCCTTGATTTGGTG 60.455 55.000 0.00 0.00 38.07 4.17
3060 5031 9.120538 GAGATATTGCAGGTATGGAAAAAGTTA 57.879 33.333 0.00 0.00 40.42 2.24
3230 5201 6.397272 TGCCTGCAAGATTTTATTACCTTTG 58.603 36.000 0.00 0.00 34.07 2.77
3302 5273 1.404843 AGGCCAATCCTCGTCTAGAC 58.595 55.000 13.18 13.18 43.20 2.59
3380 5351 6.760770 CAGAGGAAGTCTTTGAGGATATGTTC 59.239 42.308 0.00 0.00 30.64 3.18
3560 5531 3.474570 GGCGCTGGAGAGGTGGAT 61.475 66.667 7.64 0.00 0.00 3.41
3818 5789 4.623863 AGGCTGATAACATTTTCCCCAAT 58.376 39.130 0.00 0.00 0.00 3.16
3820 5791 6.201591 AGGCTGATAACATTTTCCCCAATAA 58.798 36.000 0.00 0.00 0.00 1.40
4172 6146 3.751479 ACCAGCAATTTTTGAAGGACC 57.249 42.857 5.70 0.00 32.54 4.46
4178 6152 3.253230 CAATTTTTGAAGGACCGATGGC 58.747 45.455 0.00 0.00 0.00 4.40
4182 6156 0.250234 TTGAAGGACCGATGGCTGAG 59.750 55.000 0.00 0.00 0.00 3.35
4300 6277 4.199432 AGTGGTCTTGTCTAATCTGCAG 57.801 45.455 7.63 7.63 0.00 4.41
4312 6289 0.250901 ATCTGCAGCGTTCCTTTGGT 60.251 50.000 9.47 0.00 0.00 3.67
4341 6318 6.954102 ACCTATGAAGAAAACTTTAGGCCAAT 59.046 34.615 5.01 0.00 0.00 3.16
4354 6331 5.731957 TTAGGCCAATTTTACTTGGGTTC 57.268 39.130 5.01 0.00 44.89 3.62
4355 6332 3.582164 AGGCCAATTTTACTTGGGTTCA 58.418 40.909 5.01 0.00 44.89 3.18
4356 6333 3.323691 AGGCCAATTTTACTTGGGTTCAC 59.676 43.478 5.01 0.00 44.89 3.18
4397 6375 7.645058 TTCTAAAGGATAGGAATTTTGCAGG 57.355 36.000 0.00 0.00 0.00 4.85
4400 6378 6.933514 AAAGGATAGGAATTTTGCAGGAAA 57.066 33.333 0.00 0.00 0.00 3.13
4401 6379 6.933514 AAGGATAGGAATTTTGCAGGAAAA 57.066 33.333 1.88 1.88 37.93 2.29
4421 6400 5.912360 AAATTTTCTTTGCAGCACTAAGC 57.088 34.783 0.00 0.00 46.19 3.09
4490 6485 9.927668 TCCTTCATATTTCAAAGGAAAAATGAC 57.072 29.630 0.69 0.00 45.52 3.06
4491 6486 9.709495 CCTTCATATTTCAAAGGAAAAATGACA 57.291 29.630 0.00 0.00 45.52 3.58
4499 6494 9.748708 TTTCAAAGGAAAAATGACATTAGTCTG 57.251 29.630 0.00 0.00 41.36 3.51
4501 6496 9.130661 TCAAAGGAAAAATGACATTAGTCTGAA 57.869 29.630 0.00 0.00 45.20 3.02
4502 6497 9.185192 CAAAGGAAAAATGACATTAGTCTGAAC 57.815 33.333 0.00 0.00 45.20 3.18
4503 6498 7.454260 AGGAAAAATGACATTAGTCTGAACC 57.546 36.000 0.00 0.00 45.20 3.62
4504 6499 7.004086 AGGAAAAATGACATTAGTCTGAACCA 58.996 34.615 0.00 0.00 45.20 3.67
4505 6500 7.505585 AGGAAAAATGACATTAGTCTGAACCAA 59.494 33.333 0.00 0.00 45.20 3.67
4506 6501 7.595130 GGAAAAATGACATTAGTCTGAACCAAC 59.405 37.037 0.00 0.00 45.20 3.77
4507 6502 5.862924 AATGACATTAGTCTGAACCAACG 57.137 39.130 0.00 0.00 45.20 4.10
4656 6664 2.563179 ACAGAACTGTAGGACTCGCAAT 59.437 45.455 5.62 0.00 42.90 3.56
4728 6737 3.181474 GGTCTTCAGAGATAAACCCTCCG 60.181 52.174 0.00 0.00 33.70 4.63
4774 6783 9.570488 CTTATCACGAGCTTAAAAGTACTACTT 57.430 33.333 0.00 0.00 40.80 2.24
4775 6784 9.565213 TTATCACGAGCTTAAAAGTACTACTTC 57.435 33.333 0.00 0.00 37.47 3.01
4776 6785 6.973843 TCACGAGCTTAAAAGTACTACTTCA 58.026 36.000 0.00 0.00 37.47 3.02
4777 6786 7.600065 TCACGAGCTTAAAAGTACTACTTCAT 58.400 34.615 0.00 0.00 37.47 2.57
4778 6787 8.733458 TCACGAGCTTAAAAGTACTACTTCATA 58.267 33.333 0.00 0.00 37.47 2.15
4779 6788 9.350357 CACGAGCTTAAAAGTACTACTTCATAA 57.650 33.333 0.00 4.96 37.47 1.90
4794 6803 9.407380 ACTACTTCATAATATTCATGGCAAACA 57.593 29.630 0.00 0.00 0.00 2.83
4795 6804 9.669353 CTACTTCATAATATTCATGGCAAACAC 57.331 33.333 0.00 0.00 0.00 3.32
4796 6805 8.065473 ACTTCATAATATTCATGGCAAACACA 57.935 30.769 0.00 0.00 0.00 3.72
4797 6806 8.192774 ACTTCATAATATTCATGGCAAACACAG 58.807 33.333 0.00 0.00 0.00 3.66
4798 6807 7.878547 TCATAATATTCATGGCAAACACAGA 57.121 32.000 0.00 0.00 0.00 3.41
4799 6808 8.467963 TCATAATATTCATGGCAAACACAGAT 57.532 30.769 0.00 0.00 0.00 2.90
4800 6809 9.571816 TCATAATATTCATGGCAAACACAGATA 57.428 29.630 0.00 0.00 0.00 1.98
4801 6810 9.616634 CATAATATTCATGGCAAACACAGATAC 57.383 33.333 0.00 0.00 0.00 2.24
4802 6811 7.643569 AATATTCATGGCAAACACAGATACA 57.356 32.000 0.00 0.00 0.00 2.29
4803 6812 5.571784 ATTCATGGCAAACACAGATACAG 57.428 39.130 0.00 0.00 0.00 2.74
4804 6813 2.749076 TCATGGCAAACACAGATACAGC 59.251 45.455 0.00 0.00 0.00 4.40
4805 6814 2.268762 TGGCAAACACAGATACAGCA 57.731 45.000 0.00 0.00 0.00 4.41
4806 6815 2.580962 TGGCAAACACAGATACAGCAA 58.419 42.857 0.00 0.00 0.00 3.91
4807 6816 2.553602 TGGCAAACACAGATACAGCAAG 59.446 45.455 0.00 0.00 0.00 4.01
4808 6817 2.095059 GGCAAACACAGATACAGCAAGG 60.095 50.000 0.00 0.00 0.00 3.61
4809 6818 2.095059 GCAAACACAGATACAGCAAGGG 60.095 50.000 0.00 0.00 0.00 3.95
4810 6819 3.411446 CAAACACAGATACAGCAAGGGA 58.589 45.455 0.00 0.00 0.00 4.20
4811 6820 3.340814 AACACAGATACAGCAAGGGAG 57.659 47.619 0.00 0.00 0.00 4.30
4812 6821 2.540383 ACACAGATACAGCAAGGGAGA 58.460 47.619 0.00 0.00 0.00 3.71
4813 6822 2.906389 ACACAGATACAGCAAGGGAGAA 59.094 45.455 0.00 0.00 0.00 2.87
4814 6823 3.327757 ACACAGATACAGCAAGGGAGAAA 59.672 43.478 0.00 0.00 0.00 2.52
4815 6824 4.202461 ACACAGATACAGCAAGGGAGAAAA 60.202 41.667 0.00 0.00 0.00 2.29
4816 6825 4.946157 CACAGATACAGCAAGGGAGAAAAT 59.054 41.667 0.00 0.00 0.00 1.82
4817 6826 5.065731 CACAGATACAGCAAGGGAGAAAATC 59.934 44.000 0.00 0.00 0.00 2.17
4827 6836 2.514458 GGAGAAAATCCCTCAAGGCA 57.486 50.000 0.00 0.00 43.01 4.75
4828 6837 2.807676 GGAGAAAATCCCTCAAGGCAA 58.192 47.619 0.00 0.00 43.01 4.52
4829 6838 3.165071 GGAGAAAATCCCTCAAGGCAAA 58.835 45.455 0.00 0.00 43.01 3.68
4830 6839 3.578282 GGAGAAAATCCCTCAAGGCAAAA 59.422 43.478 0.00 0.00 43.01 2.44
4831 6840 4.223700 GGAGAAAATCCCTCAAGGCAAAAT 59.776 41.667 0.00 0.00 43.01 1.82
4832 6841 5.280164 GGAGAAAATCCCTCAAGGCAAAATT 60.280 40.000 0.00 0.00 43.01 1.82
4833 6842 5.798132 AGAAAATCCCTCAAGGCAAAATTC 58.202 37.500 0.00 0.00 34.51 2.17
4834 6843 4.558226 AAATCCCTCAAGGCAAAATTCC 57.442 40.909 0.00 0.00 34.51 3.01
4835 6844 1.937191 TCCCTCAAGGCAAAATTCCC 58.063 50.000 0.00 0.00 34.51 3.97
4836 6845 0.904649 CCCTCAAGGCAAAATTCCCC 59.095 55.000 0.00 0.00 0.00 4.81
4837 6846 1.553184 CCCTCAAGGCAAAATTCCCCT 60.553 52.381 0.00 0.00 0.00 4.79
4838 6847 2.292192 CCCTCAAGGCAAAATTCCCCTA 60.292 50.000 0.00 0.00 0.00 3.53
4839 6848 3.440127 CCTCAAGGCAAAATTCCCCTAA 58.560 45.455 0.00 0.00 0.00 2.69
4840 6849 3.837731 CCTCAAGGCAAAATTCCCCTAAA 59.162 43.478 0.00 0.00 0.00 1.85
4841 6850 4.081476 CCTCAAGGCAAAATTCCCCTAAAG 60.081 45.833 0.00 0.00 0.00 1.85
4842 6851 4.746466 TCAAGGCAAAATTCCCCTAAAGA 58.254 39.130 0.00 0.00 0.00 2.52
4843 6852 5.151454 TCAAGGCAAAATTCCCCTAAAGAA 58.849 37.500 0.00 0.00 0.00 2.52
4844 6853 5.604650 TCAAGGCAAAATTCCCCTAAAGAAA 59.395 36.000 0.00 0.00 0.00 2.52
4845 6854 5.745312 AGGCAAAATTCCCCTAAAGAAAG 57.255 39.130 0.00 0.00 0.00 2.62
4846 6855 4.020218 AGGCAAAATTCCCCTAAAGAAAGC 60.020 41.667 0.00 0.00 0.00 3.51
4847 6856 4.262851 GGCAAAATTCCCCTAAAGAAAGCA 60.263 41.667 0.00 0.00 0.00 3.91
4848 6857 4.931601 GCAAAATTCCCCTAAAGAAAGCAG 59.068 41.667 0.00 0.00 0.00 4.24
4849 6858 4.808414 AAATTCCCCTAAAGAAAGCAGC 57.192 40.909 0.00 0.00 0.00 5.25
4850 6859 3.746792 ATTCCCCTAAAGAAAGCAGCT 57.253 42.857 0.00 0.00 0.00 4.24
4851 6860 3.525800 TTCCCCTAAAGAAAGCAGCTT 57.474 42.857 0.21 0.21 0.00 3.74
4852 6861 3.525800 TCCCCTAAAGAAAGCAGCTTT 57.474 42.857 20.74 20.74 38.90 3.51
4861 6870 2.747436 GAAAGCAGCTTTCAACCAAGG 58.253 47.619 33.92 0.00 46.23 3.61
4862 6871 2.071778 AAGCAGCTTTCAACCAAGGA 57.928 45.000 0.21 0.00 0.00 3.36
4863 6872 2.299326 AGCAGCTTTCAACCAAGGAT 57.701 45.000 0.00 0.00 0.00 3.24
4864 6873 2.601905 AGCAGCTTTCAACCAAGGATT 58.398 42.857 0.00 0.00 0.00 3.01
4865 6874 2.967887 AGCAGCTTTCAACCAAGGATTT 59.032 40.909 0.00 0.00 0.00 2.17
4866 6875 3.389002 AGCAGCTTTCAACCAAGGATTTT 59.611 39.130 0.00 0.00 0.00 1.82
4867 6876 3.742882 GCAGCTTTCAACCAAGGATTTTC 59.257 43.478 0.00 0.00 0.00 2.29
4868 6877 4.502087 GCAGCTTTCAACCAAGGATTTTCT 60.502 41.667 0.00 0.00 0.00 2.52
4869 6878 4.986659 CAGCTTTCAACCAAGGATTTTCTG 59.013 41.667 0.00 0.00 0.00 3.02
4870 6879 4.895297 AGCTTTCAACCAAGGATTTTCTGA 59.105 37.500 0.00 0.00 0.00 3.27
4871 6880 4.984785 GCTTTCAACCAAGGATTTTCTGAC 59.015 41.667 0.00 0.00 0.00 3.51
4872 6881 4.829064 TTCAACCAAGGATTTTCTGACG 57.171 40.909 0.00 0.00 0.00 4.35
4873 6882 3.815809 TCAACCAAGGATTTTCTGACGT 58.184 40.909 0.00 0.00 0.00 4.34
4874 6883 3.813166 TCAACCAAGGATTTTCTGACGTC 59.187 43.478 9.11 9.11 0.00 4.34
4875 6884 3.771577 ACCAAGGATTTTCTGACGTCT 57.228 42.857 17.92 0.00 0.00 4.18
4876 6885 3.403038 ACCAAGGATTTTCTGACGTCTG 58.597 45.455 17.92 16.72 0.00 3.51
4877 6886 2.160417 CCAAGGATTTTCTGACGTCTGC 59.840 50.000 17.92 0.00 0.00 4.26
4878 6887 1.714794 AGGATTTTCTGACGTCTGCG 58.285 50.000 17.92 5.46 44.93 5.18
4879 6888 0.095417 GGATTTTCTGACGTCTGCGC 59.905 55.000 17.92 0.00 42.83 6.09
4880 6889 0.095417 GATTTTCTGACGTCTGCGCC 59.905 55.000 17.92 1.45 42.83 6.53
4881 6890 1.298859 ATTTTCTGACGTCTGCGCCC 61.299 55.000 17.92 0.00 42.83 6.13
4882 6891 2.652382 TTTTCTGACGTCTGCGCCCA 62.652 55.000 17.92 0.00 42.83 5.36
4883 6892 2.652382 TTTCTGACGTCTGCGCCCAA 62.652 55.000 17.92 3.36 42.83 4.12
4884 6893 2.434884 CTGACGTCTGCGCCCAAT 60.435 61.111 17.92 0.00 42.83 3.16
4885 6894 2.741985 TGACGTCTGCGCCCAATG 60.742 61.111 17.92 0.00 42.83 2.82
4886 6895 4.166011 GACGTCTGCGCCCAATGC 62.166 66.667 8.70 0.00 42.83 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.932207 TCTAATTTGCATGATTTGAATGAAACT 57.068 25.926 0.00 0.00 0.00 2.66
2 3 9.932207 ACTCTAATTTGCATGATTTGAATGAAA 57.068 25.926 0.00 0.00 0.00 2.69
3 4 9.577110 GACTCTAATTTGCATGATTTGAATGAA 57.423 29.630 0.00 0.00 0.00 2.57
4 5 8.192774 GGACTCTAATTTGCATGATTTGAATGA 58.807 33.333 0.00 0.00 0.00 2.57
5 6 7.977293 TGGACTCTAATTTGCATGATTTGAATG 59.023 33.333 0.00 0.00 0.00 2.67
6 7 8.070034 TGGACTCTAATTTGCATGATTTGAAT 57.930 30.769 0.00 0.00 0.00 2.57
7 8 7.465353 TGGACTCTAATTTGCATGATTTGAA 57.535 32.000 0.00 0.00 0.00 2.69
8 9 7.465353 TTGGACTCTAATTTGCATGATTTGA 57.535 32.000 0.00 0.00 0.00 2.69
9 10 8.537049 TTTTGGACTCTAATTTGCATGATTTG 57.463 30.769 0.00 0.00 0.00 2.32
13 14 9.241919 TCTTATTTTGGACTCTAATTTGCATGA 57.758 29.630 0.00 0.00 0.00 3.07
14 15 9.512435 CTCTTATTTTGGACTCTAATTTGCATG 57.488 33.333 0.00 0.00 0.00 4.06
15 16 8.193438 GCTCTTATTTTGGACTCTAATTTGCAT 58.807 33.333 0.00 0.00 0.00 3.96
16 17 7.176515 TGCTCTTATTTTGGACTCTAATTTGCA 59.823 33.333 0.00 0.00 0.00 4.08
17 18 7.538575 TGCTCTTATTTTGGACTCTAATTTGC 58.461 34.615 0.00 0.00 0.00 3.68
18 19 9.912634 TTTGCTCTTATTTTGGACTCTAATTTG 57.087 29.630 0.00 0.00 0.00 2.32
21 22 9.301897 ACTTTTGCTCTTATTTTGGACTCTAAT 57.698 29.630 0.00 0.00 0.00 1.73
22 23 8.567948 CACTTTTGCTCTTATTTTGGACTCTAA 58.432 33.333 0.00 0.00 0.00 2.10
23 24 7.719633 ACACTTTTGCTCTTATTTTGGACTCTA 59.280 33.333 0.00 0.00 0.00 2.43
24 25 6.547510 ACACTTTTGCTCTTATTTTGGACTCT 59.452 34.615 0.00 0.00 0.00 3.24
25 26 6.739112 ACACTTTTGCTCTTATTTTGGACTC 58.261 36.000 0.00 0.00 0.00 3.36
26 27 6.715347 ACACTTTTGCTCTTATTTTGGACT 57.285 33.333 0.00 0.00 0.00 3.85
27 28 6.142320 CGAACACTTTTGCTCTTATTTTGGAC 59.858 38.462 0.00 0.00 0.00 4.02
28 29 6.205784 CGAACACTTTTGCTCTTATTTTGGA 58.794 36.000 0.00 0.00 0.00 3.53
29 30 5.402270 CCGAACACTTTTGCTCTTATTTTGG 59.598 40.000 0.00 0.00 0.00 3.28
30 31 6.205784 TCCGAACACTTTTGCTCTTATTTTG 58.794 36.000 0.00 0.00 0.00 2.44
31 32 6.385649 TCCGAACACTTTTGCTCTTATTTT 57.614 33.333 0.00 0.00 0.00 1.82
32 33 6.385649 TTCCGAACACTTTTGCTCTTATTT 57.614 33.333 0.00 0.00 0.00 1.40
33 34 6.385649 TTTCCGAACACTTTTGCTCTTATT 57.614 33.333 0.00 0.00 0.00 1.40
34 35 6.385649 TTTTCCGAACACTTTTGCTCTTAT 57.614 33.333 0.00 0.00 0.00 1.73
35 36 5.821516 TTTTCCGAACACTTTTGCTCTTA 57.178 34.783 0.00 0.00 0.00 2.10
36 37 4.712122 TTTTCCGAACACTTTTGCTCTT 57.288 36.364 0.00 0.00 0.00 2.85
37 38 4.712122 TTTTTCCGAACACTTTTGCTCT 57.288 36.364 0.00 0.00 0.00 4.09
38 39 6.435428 TCTATTTTTCCGAACACTTTTGCTC 58.565 36.000 0.00 0.00 0.00 4.26
39 40 6.385649 TCTATTTTTCCGAACACTTTTGCT 57.614 33.333 0.00 0.00 0.00 3.91
40 41 7.007099 CGTATCTATTTTTCCGAACACTTTTGC 59.993 37.037 0.00 0.00 0.00 3.68
41 42 8.225107 TCGTATCTATTTTTCCGAACACTTTTG 58.775 33.333 0.00 0.00 0.00 2.44
42 43 8.225777 GTCGTATCTATTTTTCCGAACACTTTT 58.774 33.333 0.00 0.00 0.00 2.27
43 44 7.411157 CGTCGTATCTATTTTTCCGAACACTTT 60.411 37.037 0.00 0.00 0.00 2.66
44 45 6.034256 CGTCGTATCTATTTTTCCGAACACTT 59.966 38.462 0.00 0.00 0.00 3.16
45 46 5.514204 CGTCGTATCTATTTTTCCGAACACT 59.486 40.000 0.00 0.00 0.00 3.55
46 47 5.512788 TCGTCGTATCTATTTTTCCGAACAC 59.487 40.000 0.00 0.00 0.00 3.32
47 48 5.639757 TCGTCGTATCTATTTTTCCGAACA 58.360 37.500 0.00 0.00 0.00 3.18
48 49 6.470235 TCTTCGTCGTATCTATTTTTCCGAAC 59.530 38.462 0.00 0.00 0.00 3.95
49 50 6.470235 GTCTTCGTCGTATCTATTTTTCCGAA 59.530 38.462 0.00 0.00 0.00 4.30
50 51 5.967674 GTCTTCGTCGTATCTATTTTTCCGA 59.032 40.000 0.00 0.00 0.00 4.55
51 52 5.108854 CGTCTTCGTCGTATCTATTTTTCCG 60.109 44.000 0.00 0.00 0.00 4.30
52 53 6.182832 CGTCTTCGTCGTATCTATTTTTCC 57.817 41.667 0.00 0.00 0.00 3.13
68 69 1.395954 TCGTGGTCTGATACGTCTTCG 59.604 52.381 14.19 0.00 40.87 3.79
69 70 2.419324 AGTCGTGGTCTGATACGTCTTC 59.581 50.000 14.19 0.00 40.87 2.87
70 71 2.419324 GAGTCGTGGTCTGATACGTCTT 59.581 50.000 14.29 5.38 38.43 3.01
71 72 2.008329 GAGTCGTGGTCTGATACGTCT 58.992 52.381 13.48 13.48 40.34 4.18
72 73 1.267433 CGAGTCGTGGTCTGATACGTC 60.267 57.143 3.82 10.34 40.87 4.34
73 74 0.725686 CGAGTCGTGGTCTGATACGT 59.274 55.000 3.82 0.00 40.87 3.57
74 75 1.004595 TCGAGTCGTGGTCTGATACG 58.995 55.000 13.12 10.05 41.38 3.06
75 76 1.268133 GCTCGAGTCGTGGTCTGATAC 60.268 57.143 15.13 0.00 0.00 2.24
76 77 1.015109 GCTCGAGTCGTGGTCTGATA 58.985 55.000 15.13 0.00 0.00 2.15
77 78 0.960861 TGCTCGAGTCGTGGTCTGAT 60.961 55.000 15.13 0.00 0.00 2.90
78 79 0.960861 ATGCTCGAGTCGTGGTCTGA 60.961 55.000 15.13 0.00 0.00 3.27
79 80 0.799917 CATGCTCGAGTCGTGGTCTG 60.800 60.000 15.13 1.84 0.00 3.51
80 81 1.508545 CATGCTCGAGTCGTGGTCT 59.491 57.895 15.13 0.00 0.00 3.85
81 82 2.161486 GCATGCTCGAGTCGTGGTC 61.161 63.158 22.16 9.55 0.00 4.02
82 83 2.125912 GCATGCTCGAGTCGTGGT 60.126 61.111 22.16 0.00 0.00 4.16
83 84 2.125952 TGCATGCTCGAGTCGTGG 60.126 61.111 20.33 8.06 0.00 4.94
84 85 2.447887 GGTGCATGCTCGAGTCGTG 61.448 63.158 20.33 17.40 0.00 4.35
85 86 2.125912 GGTGCATGCTCGAGTCGT 60.126 61.111 20.33 5.03 0.00 4.34
86 87 2.125952 TGGTGCATGCTCGAGTCG 60.126 61.111 20.33 6.09 0.00 4.18
87 88 1.374631 TGTGGTGCATGCTCGAGTC 60.375 57.895 20.33 7.10 0.00 3.36
88 89 1.669115 GTGTGGTGCATGCTCGAGT 60.669 57.895 20.33 0.00 0.00 4.18
89 90 2.733671 CGTGTGGTGCATGCTCGAG 61.734 63.158 20.33 8.45 0.00 4.04
90 91 2.738139 CGTGTGGTGCATGCTCGA 60.738 61.111 20.33 10.06 0.00 4.04
91 92 2.738139 TCGTGTGGTGCATGCTCG 60.738 61.111 20.33 13.08 34.19 5.03
92 93 1.506309 TTGTCGTGTGGTGCATGCTC 61.506 55.000 20.33 15.68 34.19 4.26
93 94 0.890542 ATTGTCGTGTGGTGCATGCT 60.891 50.000 20.33 0.00 34.19 3.79
94 95 0.730155 CATTGTCGTGTGGTGCATGC 60.730 55.000 11.82 11.82 34.19 4.06
95 96 0.109643 CCATTGTCGTGTGGTGCATG 60.110 55.000 0.00 0.00 35.47 4.06
96 97 1.865788 GCCATTGTCGTGTGGTGCAT 61.866 55.000 0.00 0.00 37.81 3.96
97 98 2.551006 GCCATTGTCGTGTGGTGCA 61.551 57.895 0.00 0.00 37.81 4.57
98 99 2.069465 TTGCCATTGTCGTGTGGTGC 62.069 55.000 0.00 0.00 37.81 5.01
99 100 0.317770 GTTGCCATTGTCGTGTGGTG 60.318 55.000 0.00 0.00 37.81 4.17
100 101 1.452145 GGTTGCCATTGTCGTGTGGT 61.452 55.000 0.00 0.00 37.81 4.16
101 102 1.285641 GGTTGCCATTGTCGTGTGG 59.714 57.895 0.00 0.00 38.55 4.17
102 103 0.317770 GTGGTTGCCATTGTCGTGTG 60.318 55.000 0.00 0.00 35.28 3.82
103 104 0.749818 TGTGGTTGCCATTGTCGTGT 60.750 50.000 0.00 0.00 35.28 4.49
104 105 0.040157 CTGTGGTTGCCATTGTCGTG 60.040 55.000 0.00 0.00 35.28 4.35
105 106 1.172180 CCTGTGGTTGCCATTGTCGT 61.172 55.000 0.00 0.00 35.28 4.34
106 107 1.580942 CCTGTGGTTGCCATTGTCG 59.419 57.895 0.00 0.00 35.28 4.35
107 108 1.290009 GCCTGTGGTTGCCATTGTC 59.710 57.895 0.00 0.00 35.28 3.18
108 109 1.457267 TGCCTGTGGTTGCCATTGT 60.457 52.632 0.00 0.00 35.28 2.71
109 110 1.005867 GTGCCTGTGGTTGCCATTG 60.006 57.895 0.00 0.00 35.28 2.82
110 111 1.457267 TGTGCCTGTGGTTGCCATT 60.457 52.632 0.00 0.00 35.28 3.16
111 112 2.198150 TGTGCCTGTGGTTGCCAT 59.802 55.556 0.00 0.00 35.28 4.40
112 113 2.832661 GTGTGCCTGTGGTTGCCA 60.833 61.111 0.00 0.00 0.00 4.92
113 114 3.605664 GGTGTGCCTGTGGTTGCC 61.606 66.667 0.00 0.00 0.00 4.52
114 115 3.605664 GGGTGTGCCTGTGGTTGC 61.606 66.667 0.00 0.00 34.45 4.17
115 116 1.455587 AAGGGTGTGCCTGTGGTTG 60.456 57.895 0.00 0.00 34.45 3.77
116 117 1.455587 CAAGGGTGTGCCTGTGGTT 60.456 57.895 0.00 0.00 34.45 3.67
117 118 2.195683 CAAGGGTGTGCCTGTGGT 59.804 61.111 0.00 0.00 34.45 4.16
118 119 3.297620 GCAAGGGTGTGCCTGTGG 61.298 66.667 0.00 0.00 38.66 4.17
127 128 4.323477 TTCCGGACGGCAAGGGTG 62.323 66.667 1.83 0.00 34.68 4.61
128 129 4.324991 GTTCCGGACGGCAAGGGT 62.325 66.667 1.83 0.00 34.68 4.34
129 130 4.323477 TGTTCCGGACGGCAAGGG 62.323 66.667 1.83 0.00 34.68 3.95
130 131 3.047877 GTGTTCCGGACGGCAAGG 61.048 66.667 1.83 0.00 34.68 3.61
131 132 2.280524 TGTGTTCCGGACGGCAAG 60.281 61.111 1.83 0.00 34.68 4.01
132 133 2.589442 GTGTGTTCCGGACGGCAA 60.589 61.111 1.83 0.00 34.68 4.52
133 134 4.953868 CGTGTGTTCCGGACGGCA 62.954 66.667 1.83 0.05 34.68 5.69
134 135 4.651008 TCGTGTGTTCCGGACGGC 62.651 66.667 1.83 0.00 33.88 5.68
135 136 2.027897 TTCGTGTGTTCCGGACGG 59.972 61.111 1.83 3.96 33.88 4.79
136 137 2.305127 GGTTCGTGTGTTCCGGACG 61.305 63.158 1.83 4.63 34.59 4.79
137 138 0.531311 AAGGTTCGTGTGTTCCGGAC 60.531 55.000 1.83 0.00 32.98 4.79
138 139 0.249573 GAAGGTTCGTGTGTTCCGGA 60.250 55.000 0.00 0.00 0.00 5.14
139 140 0.249741 AGAAGGTTCGTGTGTTCCGG 60.250 55.000 0.00 0.00 0.00 5.14
140 141 1.137513 GAGAAGGTTCGTGTGTTCCG 58.862 55.000 0.00 0.00 0.00 4.30
141 142 1.865340 GTGAGAAGGTTCGTGTGTTCC 59.135 52.381 0.00 0.00 0.00 3.62
142 143 1.865340 GGTGAGAAGGTTCGTGTGTTC 59.135 52.381 0.00 0.00 0.00 3.18
143 144 1.474498 GGGTGAGAAGGTTCGTGTGTT 60.474 52.381 0.00 0.00 0.00 3.32
144 145 0.106149 GGGTGAGAAGGTTCGTGTGT 59.894 55.000 0.00 0.00 0.00 3.72
145 146 0.393077 AGGGTGAGAAGGTTCGTGTG 59.607 55.000 0.00 0.00 0.00 3.82
146 147 0.680061 GAGGGTGAGAAGGTTCGTGT 59.320 55.000 0.00 0.00 0.00 4.49
147 148 0.037232 GGAGGGTGAGAAGGTTCGTG 60.037 60.000 0.00 0.00 0.00 4.35
148 149 0.178929 AGGAGGGTGAGAAGGTTCGT 60.179 55.000 0.00 0.00 0.00 3.85
149 150 0.977395 AAGGAGGGTGAGAAGGTTCG 59.023 55.000 0.00 0.00 0.00 3.95
150 151 1.978580 TCAAGGAGGGTGAGAAGGTTC 59.021 52.381 0.00 0.00 0.00 3.62
151 152 2.106684 GTTCAAGGAGGGTGAGAAGGTT 59.893 50.000 0.00 0.00 0.00 3.50
152 153 1.700186 GTTCAAGGAGGGTGAGAAGGT 59.300 52.381 0.00 0.00 0.00 3.50
153 154 1.981495 AGTTCAAGGAGGGTGAGAAGG 59.019 52.381 0.00 0.00 0.00 3.46
154 155 2.873649 GCAGTTCAAGGAGGGTGAGAAG 60.874 54.545 0.00 0.00 0.00 2.85
155 156 1.072331 GCAGTTCAAGGAGGGTGAGAA 59.928 52.381 0.00 0.00 0.00 2.87
156 157 0.687354 GCAGTTCAAGGAGGGTGAGA 59.313 55.000 0.00 0.00 0.00 3.27
157 158 0.689623 AGCAGTTCAAGGAGGGTGAG 59.310 55.000 0.00 0.00 0.00 3.51
158 159 1.140312 AAGCAGTTCAAGGAGGGTGA 58.860 50.000 0.00 0.00 0.00 4.02
159 160 1.202806 TCAAGCAGTTCAAGGAGGGTG 60.203 52.381 0.00 0.00 0.00 4.61
160 161 1.072965 CTCAAGCAGTTCAAGGAGGGT 59.927 52.381 0.00 0.00 0.00 4.34
161 162 1.818642 CTCAAGCAGTTCAAGGAGGG 58.181 55.000 0.00 0.00 0.00 4.30
162 163 1.163554 GCTCAAGCAGTTCAAGGAGG 58.836 55.000 0.00 0.00 41.59 4.30
174 175 2.747855 CGAGGGGGTTGCTCAAGC 60.748 66.667 3.41 3.41 42.50 4.01
175 176 2.747855 GCGAGGGGGTTGCTCAAG 60.748 66.667 0.00 0.00 31.94 3.02
176 177 4.697756 CGCGAGGGGGTTGCTCAA 62.698 66.667 0.00 0.00 32.58 3.02
180 181 4.778143 ATCACGCGAGGGGGTTGC 62.778 66.667 15.93 0.00 37.19 4.17
181 182 2.046314 AATCACGCGAGGGGGTTG 60.046 61.111 15.93 0.00 37.19 3.77
182 183 2.267961 GAATCACGCGAGGGGGTT 59.732 61.111 15.93 0.91 37.19 4.11
183 184 3.000819 TGAATCACGCGAGGGGGT 61.001 61.111 15.93 0.00 40.38 4.95
184 185 2.511600 GTGAATCACGCGAGGGGG 60.512 66.667 15.93 0.00 33.12 5.40
193 194 2.029244 CGTACCATTGCTCGTGAATCAC 59.971 50.000 2.75 2.75 0.00 3.06
194 195 2.267426 CGTACCATTGCTCGTGAATCA 58.733 47.619 0.00 0.00 0.00 2.57
195 196 1.004927 GCGTACCATTGCTCGTGAATC 60.005 52.381 0.00 0.00 0.00 2.52
196 197 1.006832 GCGTACCATTGCTCGTGAAT 58.993 50.000 0.00 0.00 0.00 2.57
197 198 0.037697 AGCGTACCATTGCTCGTGAA 60.038 50.000 0.00 0.00 36.53 3.18
198 199 0.457853 GAGCGTACCATTGCTCGTGA 60.458 55.000 4.97 0.00 47.00 4.35
199 200 1.999051 GAGCGTACCATTGCTCGTG 59.001 57.895 4.97 0.00 47.00 4.35
200 201 4.496670 GAGCGTACCATTGCTCGT 57.503 55.556 4.97 0.00 47.00 4.18
203 204 0.037697 TTCACGAGCGTACCATTGCT 60.038 50.000 0.00 0.00 45.90 3.91
204 205 0.094730 GTTCACGAGCGTACCATTGC 59.905 55.000 0.00 0.00 0.00 3.56
205 206 0.719465 GGTTCACGAGCGTACCATTG 59.281 55.000 9.44 0.00 29.60 2.82
206 207 3.132863 GGTTCACGAGCGTACCATT 57.867 52.632 9.44 0.00 29.60 3.16
207 208 4.904466 GGTTCACGAGCGTACCAT 57.096 55.556 9.44 0.00 29.60 3.55
217 218 2.202878 ATCATCGCCCGGTTCACG 60.203 61.111 0.00 0.00 43.80 4.35
218 219 0.876342 GAGATCATCGCCCGGTTCAC 60.876 60.000 0.00 0.00 0.00 3.18
219 220 1.441729 GAGATCATCGCCCGGTTCA 59.558 57.895 0.00 0.00 0.00 3.18
220 221 1.661821 CGAGATCATCGCCCGGTTC 60.662 63.158 0.00 0.00 45.98 3.62
221 222 2.417516 CGAGATCATCGCCCGGTT 59.582 61.111 0.00 0.00 45.98 4.44
240 241 4.467084 TCAAGGTCGCCATCGCCC 62.467 66.667 0.00 0.00 33.17 6.13
241 242 3.195698 GTCAAGGTCGCCATCGCC 61.196 66.667 0.00 0.00 35.26 5.54
242 243 3.195698 GGTCAAGGTCGCCATCGC 61.196 66.667 0.00 0.00 35.26 4.58
243 244 2.885644 CGGTCAAGGTCGCCATCG 60.886 66.667 0.00 0.00 0.00 3.84
244 245 2.311688 ATCCGGTCAAGGTCGCCATC 62.312 60.000 0.00 0.00 0.00 3.51
245 246 2.311688 GATCCGGTCAAGGTCGCCAT 62.312 60.000 0.00 0.00 0.00 4.40
246 247 3.000819 ATCCGGTCAAGGTCGCCA 61.001 61.111 0.00 0.00 0.00 5.69
247 248 2.202892 GATCCGGTCAAGGTCGCC 60.203 66.667 0.00 0.00 0.00 5.54
248 249 2.582498 CGATCCGGTCAAGGTCGC 60.582 66.667 0.00 0.00 31.84 5.19
249 250 2.104331 CCGATCCGGTCAAGGTCG 59.896 66.667 0.00 3.42 42.73 4.79
265 266 4.592426 GACAACTAGGTCGGCACC 57.408 61.111 0.00 0.00 44.19 5.01
271 272 3.381908 AGATGATGGTCGACAACTAGGTC 59.618 47.826 18.91 0.25 34.42 3.85
272 273 3.366396 AGATGATGGTCGACAACTAGGT 58.634 45.455 18.91 0.00 0.00 3.08
273 274 4.363999 GAAGATGATGGTCGACAACTAGG 58.636 47.826 18.91 0.00 0.00 3.02
274 275 4.142160 TGGAAGATGATGGTCGACAACTAG 60.142 45.833 18.91 0.00 0.00 2.57
275 276 3.767131 TGGAAGATGATGGTCGACAACTA 59.233 43.478 18.91 0.00 0.00 2.24
276 277 2.567169 TGGAAGATGATGGTCGACAACT 59.433 45.455 18.91 0.07 0.00 3.16
277 278 2.972625 TGGAAGATGATGGTCGACAAC 58.027 47.619 18.91 8.31 0.00 3.32
278 279 3.912496 ATGGAAGATGATGGTCGACAA 57.088 42.857 18.91 6.46 0.00 3.18
279 280 3.704061 TGTATGGAAGATGATGGTCGACA 59.296 43.478 18.91 3.91 0.00 4.35
280 281 4.322080 TGTATGGAAGATGATGGTCGAC 57.678 45.455 7.13 7.13 0.00 4.20
281 282 5.299949 CAATGTATGGAAGATGATGGTCGA 58.700 41.667 0.00 0.00 0.00 4.20
282 283 5.602458 CAATGTATGGAAGATGATGGTCG 57.398 43.478 0.00 0.00 0.00 4.79
296 297 3.243168 CCAATGGCGAAGACCAATGTATG 60.243 47.826 0.00 0.00 44.65 2.39
297 298 2.951642 CCAATGGCGAAGACCAATGTAT 59.048 45.455 0.00 0.00 44.65 2.29
298 299 2.364632 CCAATGGCGAAGACCAATGTA 58.635 47.619 0.00 0.00 44.65 2.29
299 300 1.176527 CCAATGGCGAAGACCAATGT 58.823 50.000 0.00 0.00 44.65 2.71
300 301 0.179129 GCCAATGGCGAAGACCAATG 60.179 55.000 9.14 0.00 44.65 2.82
301 302 2.192605 GCCAATGGCGAAGACCAAT 58.807 52.632 9.14 0.00 44.65 3.16
302 303 3.680156 GCCAATGGCGAAGACCAA 58.320 55.556 9.14 0.00 44.65 3.67
320 321 3.977244 CAACCAACTGCCCGTGCC 61.977 66.667 0.00 0.00 36.33 5.01
321 322 3.977244 CCAACCAACTGCCCGTGC 61.977 66.667 0.00 0.00 38.26 5.34
322 323 2.124693 AACCAACCAACTGCCCGTG 61.125 57.895 0.00 0.00 0.00 4.94
323 324 2.124693 CAACCAACCAACTGCCCGT 61.125 57.895 0.00 0.00 0.00 5.28
324 325 2.727544 CAACCAACCAACTGCCCG 59.272 61.111 0.00 0.00 0.00 6.13
325 326 1.334384 AACCAACCAACCAACTGCCC 61.334 55.000 0.00 0.00 0.00 5.36
326 327 1.339929 CTAACCAACCAACCAACTGCC 59.660 52.381 0.00 0.00 0.00 4.85
327 328 1.339929 CCTAACCAACCAACCAACTGC 59.660 52.381 0.00 0.00 0.00 4.40
328 329 1.960689 CCCTAACCAACCAACCAACTG 59.039 52.381 0.00 0.00 0.00 3.16
329 330 1.854280 TCCCTAACCAACCAACCAACT 59.146 47.619 0.00 0.00 0.00 3.16
330 331 2.368311 TCCCTAACCAACCAACCAAC 57.632 50.000 0.00 0.00 0.00 3.77
331 332 3.621682 AATCCCTAACCAACCAACCAA 57.378 42.857 0.00 0.00 0.00 3.67
332 333 3.117093 TCAAATCCCTAACCAACCAACCA 60.117 43.478 0.00 0.00 0.00 3.67
333 334 3.502356 TCAAATCCCTAACCAACCAACC 58.498 45.455 0.00 0.00 0.00 3.77
334 335 4.403734 TCTCAAATCCCTAACCAACCAAC 58.596 43.478 0.00 0.00 0.00 3.77
352 353 6.312141 TCATCTCTCTCTCTCTCTTTCTCA 57.688 41.667 0.00 0.00 0.00 3.27
357 358 3.788142 ACCCTCATCTCTCTCTCTCTCTT 59.212 47.826 0.00 0.00 0.00 2.85
367 368 3.751175 CGTCTCTATCACCCTCATCTCTC 59.249 52.174 0.00 0.00 0.00 3.20
368 369 3.392947 TCGTCTCTATCACCCTCATCTCT 59.607 47.826 0.00 0.00 0.00 3.10
369 370 3.745799 TCGTCTCTATCACCCTCATCTC 58.254 50.000 0.00 0.00 0.00 2.75
370 371 3.392947 TCTCGTCTCTATCACCCTCATCT 59.607 47.826 0.00 0.00 0.00 2.90
371 372 3.745799 TCTCGTCTCTATCACCCTCATC 58.254 50.000 0.00 0.00 0.00 2.92
372 373 3.866703 TCTCGTCTCTATCACCCTCAT 57.133 47.619 0.00 0.00 0.00 2.90
373 374 3.546724 CTTCTCGTCTCTATCACCCTCA 58.453 50.000 0.00 0.00 0.00 3.86
392 393 3.470888 CGTCCCATCGCCTCCCTT 61.471 66.667 0.00 0.00 0.00 3.95
403 404 3.125573 CTCGTCGCTCTCGTCCCA 61.126 66.667 0.00 0.00 36.96 4.37
446 448 1.878953 CCGCGGCCTTATTCAATAGT 58.121 50.000 14.67 0.00 0.00 2.12
460 462 0.232303 GAGTAATCAAATCGCCGCGG 59.768 55.000 24.05 24.05 0.00 6.46
461 463 0.111704 CGAGTAATCAAATCGCCGCG 60.112 55.000 6.39 6.39 0.00 6.46
481 483 0.595567 TACTTGTCGGTCACACACGC 60.596 55.000 0.00 0.00 33.41 5.34
484 486 0.032952 GCCTACTTGTCGGTCACACA 59.967 55.000 0.00 0.00 33.41 3.72
490 492 0.322277 TCTCGAGCCTACTTGTCGGT 60.322 55.000 7.81 0.00 34.43 4.69
500 502 2.122167 GGGTCATCGTCTCGAGCCT 61.122 63.158 7.81 0.00 44.64 4.58
503 505 1.003759 CGTTAGGGTCATCGTCTCGAG 60.004 57.143 5.93 5.93 39.91 4.04
504 506 1.012086 CGTTAGGGTCATCGTCTCGA 58.988 55.000 0.00 0.00 41.13 4.04
511 513 1.722011 CACCACACGTTAGGGTCATC 58.278 55.000 7.85 0.00 31.03 2.92
513 515 1.070105 GCACCACACGTTAGGGTCA 59.930 57.895 7.85 0.00 31.03 4.02
538 540 3.712881 GAAACCAACGCGCGCTCT 61.713 61.111 32.58 12.37 0.00 4.09
564 566 0.457851 TTTTGTGCAAACCCACCTCG 59.542 50.000 0.00 0.00 34.85 4.63
569 571 1.293924 CGCATTTTTGTGCAAACCCA 58.706 45.000 0.00 0.00 45.30 4.51
576 578 1.659954 TGTCGCCGCATTTTTGTGC 60.660 52.632 0.00 0.00 41.65 4.57
578 580 1.231221 TAGTGTCGCCGCATTTTTGT 58.769 45.000 0.00 0.00 0.00 2.83
585 587 1.300003 TCGTTTTAGTGTCGCCGCA 60.300 52.632 0.00 0.00 0.00 5.69
598 610 2.536761 TCTCAATTGGTCCGTCGTTT 57.463 45.000 5.42 0.00 0.00 3.60
600 612 1.548719 TCATCTCAATTGGTCCGTCGT 59.451 47.619 5.42 0.00 0.00 4.34
605 617 3.274288 GTCACCTCATCTCAATTGGTCC 58.726 50.000 5.42 0.00 0.00 4.46
610 622 3.007940 TGAACGGTCACCTCATCTCAATT 59.992 43.478 0.00 0.00 0.00 2.32
613 625 1.627864 TGAACGGTCACCTCATCTCA 58.372 50.000 0.00 0.00 0.00 3.27
614 626 2.969628 ATGAACGGTCACCTCATCTC 57.030 50.000 4.62 0.00 36.31 2.75
615 627 2.695666 CCTATGAACGGTCACCTCATCT 59.304 50.000 4.62 0.00 36.31 2.90
616 628 2.693591 TCCTATGAACGGTCACCTCATC 59.306 50.000 4.62 0.00 36.31 2.92
617 629 2.431057 GTCCTATGAACGGTCACCTCAT 59.569 50.000 4.62 4.11 36.31 2.90
618 630 1.822990 GTCCTATGAACGGTCACCTCA 59.177 52.381 4.62 0.00 36.31 3.86
682 2404 6.952773 TTGGTACTGCAACTTTAGAAACAT 57.047 33.333 0.00 0.00 0.00 2.71
723 2445 5.070685 AGGCGGAGAAATTACACTTTTCTT 58.929 37.500 0.70 0.00 42.08 2.52
744 2702 0.894835 ATTTTTGTTGGGGCGCTAGG 59.105 50.000 7.64 0.00 0.00 3.02
756 2714 6.539103 GGCGAGGAGAGTTTAGATATTTTTGT 59.461 38.462 0.00 0.00 0.00 2.83
973 2931 4.473520 ACGGGAGATTGCTGGGCG 62.474 66.667 0.00 0.00 0.00 6.13
1294 3255 2.032681 GGTGCGAGCTTTCCACCT 59.967 61.111 18.63 0.00 44.32 4.00
1341 3302 2.159366 ACTGCGATTTCCGACTACAGAG 60.159 50.000 0.00 0.00 41.76 3.35
1468 3431 7.981102 AGTAAAAGAAAGGACAAGTATGGTC 57.019 36.000 0.00 0.00 0.00 4.02
1518 3481 7.283127 GGTATAACTGGCTCATTTCATGAAAGA 59.717 37.037 24.17 18.98 39.11 2.52
1647 3611 1.406614 GGCACTGACCCTGAATCAGAG 60.407 57.143 12.53 0.00 45.46 3.35
1673 3637 0.818040 AACTCCGGACACTTGCAACC 60.818 55.000 0.00 0.00 0.00 3.77
1689 3653 2.896801 CGTCAAGGCTTGCGCAACT 61.897 57.895 21.02 13.46 38.10 3.16
1725 3689 3.990469 CAGTGTCGTTCTGCATTCTTAGT 59.010 43.478 0.00 0.00 0.00 2.24
1741 3705 1.510480 GCAACCCTGCTCACAGTGTC 61.510 60.000 0.00 0.00 45.74 3.67
1808 3772 1.817099 CCAGCCAGATGAGAACGGC 60.817 63.158 0.00 0.00 45.23 5.68
1831 3795 4.742012 AGAAGAGAAACTCCTACTCCACA 58.258 43.478 0.00 0.00 0.00 4.17
1860 3824 2.624838 CCTTGTCACCAGAATTTGCACT 59.375 45.455 0.00 0.00 0.00 4.40
1913 3877 2.815647 GCTTCTGGCGGAACCTCG 60.816 66.667 4.22 0.00 40.22 4.63
1922 3886 4.400567 ACATCCTTTTTATCAGCTTCTGGC 59.599 41.667 0.00 0.00 42.19 4.85
2245 4209 6.966534 ATTCACAATCATGGGGAAATAGAC 57.033 37.500 0.00 0.00 30.90 2.59
2575 4541 6.554982 ACATGCTGGGATAAGAGACTACAATA 59.445 38.462 0.00 0.00 0.00 1.90
2585 4551 4.574674 AGACAAACATGCTGGGATAAGA 57.425 40.909 0.00 0.00 0.00 2.10
2717 4688 5.699097 TGTAAACACCATGAACTTTAGCC 57.301 39.130 0.00 0.00 0.00 3.93
2925 4896 3.084786 CAATCTTCTTCTTGTCCACCCC 58.915 50.000 0.00 0.00 0.00 4.95
3060 5031 2.391616 TCTGCTTGCATCGACTCAAT 57.608 45.000 0.00 0.00 0.00 2.57
3122 5093 4.261801 GGTGACCAGCAAATATGTAGTGT 58.738 43.478 0.00 0.00 0.00 3.55
3230 5201 6.575162 TCCTTCTTTCCAAGAAAAGCATAC 57.425 37.500 0.83 0.00 46.13 2.39
3302 5273 3.699779 TCTATAGCAGACAAGCACTCG 57.300 47.619 0.00 0.00 36.85 4.18
3356 5327 6.406400 CGAACATATCCTCAAAGACTTCCTCT 60.406 42.308 0.00 0.00 0.00 3.69
3360 5331 4.026475 CGCGAACATATCCTCAAAGACTTC 60.026 45.833 0.00 0.00 0.00 3.01
3380 5351 1.126846 GAGAGTGTTTTCCATGTCGCG 59.873 52.381 0.00 0.00 0.00 5.87
3560 5531 6.258727 GCTTGTGCAGTATAGATTCAGCTTTA 59.741 38.462 0.00 0.00 39.41 1.85
3818 5789 5.411361 AGCAAGTAAAGACGCAATGACATTA 59.589 36.000 0.00 0.00 0.00 1.90
3820 5791 3.753272 AGCAAGTAAAGACGCAATGACAT 59.247 39.130 0.00 0.00 0.00 3.06
3827 5798 2.066262 GTAGCAGCAAGTAAAGACGCA 58.934 47.619 0.00 0.00 0.00 5.24
4114 6088 8.990163 ATTTACAGGGAAACAAGTAGAAAGAA 57.010 30.769 0.00 0.00 0.00 2.52
4178 6152 2.725221 AAGCAATCTAAGGCCCTCAG 57.275 50.000 0.00 0.00 0.00 3.35
4182 6156 3.588955 CACAAAAAGCAATCTAAGGCCC 58.411 45.455 0.00 0.00 0.00 5.80
4300 6277 1.601166 AGGTTGTACCAAAGGAACGC 58.399 50.000 0.00 0.00 41.95 4.84
4312 6289 7.392393 GGCCTAAAGTTTTCTTCATAGGTTGTA 59.608 37.037 0.00 0.00 40.16 2.41
4341 6318 5.362430 AGAATTGCTGTGAACCCAAGTAAAA 59.638 36.000 0.00 0.00 0.00 1.52
4397 6375 6.357980 GCTTAGTGCTGCAAAGAAAATTTTC 58.642 36.000 21.00 21.00 38.95 2.29
4487 6482 4.330944 ACGTTGGTTCAGACTAATGTCA 57.669 40.909 0.00 0.00 41.02 3.58
4489 6484 7.556733 TTTTTACGTTGGTTCAGACTAATGT 57.443 32.000 0.00 5.93 45.10 2.71
4490 6485 9.113876 GAATTTTTACGTTGGTTCAGACTAATG 57.886 33.333 0.00 0.00 38.70 1.90
4491 6486 8.013378 CGAATTTTTACGTTGGTTCAGACTAAT 58.987 33.333 0.00 0.00 0.00 1.73
4492 6487 7.011295 ACGAATTTTTACGTTGGTTCAGACTAA 59.989 33.333 0.00 0.00 39.75 2.24
4493 6488 6.479660 ACGAATTTTTACGTTGGTTCAGACTA 59.520 34.615 0.00 0.00 39.75 2.59
4494 6489 5.295045 ACGAATTTTTACGTTGGTTCAGACT 59.705 36.000 0.00 0.00 39.75 3.24
4495 6490 5.504392 ACGAATTTTTACGTTGGTTCAGAC 58.496 37.500 0.00 0.00 39.75 3.51
4496 6491 5.738118 ACGAATTTTTACGTTGGTTCAGA 57.262 34.783 0.00 0.00 39.75 3.27
4497 6492 7.515643 AGATACGAATTTTTACGTTGGTTCAG 58.484 34.615 0.00 0.00 42.61 3.02
4498 6493 7.424227 AGATACGAATTTTTACGTTGGTTCA 57.576 32.000 0.00 0.00 42.61 3.18
4499 6494 9.977762 ATAAGATACGAATTTTTACGTTGGTTC 57.022 29.630 0.00 0.00 42.61 3.62
4501 6496 9.153721 TCATAAGATACGAATTTTTACGTTGGT 57.846 29.630 0.00 0.00 42.61 3.67
4502 6497 9.976255 TTCATAAGATACGAATTTTTACGTTGG 57.024 29.630 0.00 0.00 42.61 3.77
4656 6664 7.278203 CACAAATGACAATGCAATAGCCAAATA 59.722 33.333 0.00 0.00 41.13 1.40
4728 6737 3.149981 AGACTTTCAAGTAGCAAAGGCC 58.850 45.455 0.00 0.00 38.26 5.19
4774 6783 7.878547 TCTGTGTTTGCCATGAATATTATGA 57.121 32.000 0.00 0.00 0.00 2.15
4775 6784 9.616634 GTATCTGTGTTTGCCATGAATATTATG 57.383 33.333 0.00 0.00 0.00 1.90
4776 6785 9.353431 TGTATCTGTGTTTGCCATGAATATTAT 57.647 29.630 0.00 0.00 0.00 1.28
4777 6786 8.744568 TGTATCTGTGTTTGCCATGAATATTA 57.255 30.769 0.00 0.00 0.00 0.98
4778 6787 7.643569 TGTATCTGTGTTTGCCATGAATATT 57.356 32.000 0.00 0.00 0.00 1.28
4779 6788 6.238842 GCTGTATCTGTGTTTGCCATGAATAT 60.239 38.462 0.00 0.00 0.00 1.28
4780 6789 5.066375 GCTGTATCTGTGTTTGCCATGAATA 59.934 40.000 0.00 0.00 0.00 1.75
4781 6790 4.142315 GCTGTATCTGTGTTTGCCATGAAT 60.142 41.667 0.00 0.00 0.00 2.57
4782 6791 3.191162 GCTGTATCTGTGTTTGCCATGAA 59.809 43.478 0.00 0.00 0.00 2.57
4783 6792 2.749076 GCTGTATCTGTGTTTGCCATGA 59.251 45.455 0.00 0.00 0.00 3.07
4784 6793 2.488937 TGCTGTATCTGTGTTTGCCATG 59.511 45.455 0.00 0.00 0.00 3.66
4785 6794 2.794103 TGCTGTATCTGTGTTTGCCAT 58.206 42.857 0.00 0.00 0.00 4.40
4786 6795 2.268762 TGCTGTATCTGTGTTTGCCA 57.731 45.000 0.00 0.00 0.00 4.92
4787 6796 2.095059 CCTTGCTGTATCTGTGTTTGCC 60.095 50.000 0.00 0.00 0.00 4.52
4788 6797 2.095059 CCCTTGCTGTATCTGTGTTTGC 60.095 50.000 0.00 0.00 0.00 3.68
4789 6798 3.411446 TCCCTTGCTGTATCTGTGTTTG 58.589 45.455 0.00 0.00 0.00 2.93
4790 6799 3.327757 TCTCCCTTGCTGTATCTGTGTTT 59.672 43.478 0.00 0.00 0.00 2.83
4791 6800 2.906389 TCTCCCTTGCTGTATCTGTGTT 59.094 45.455 0.00 0.00 0.00 3.32
4792 6801 2.540383 TCTCCCTTGCTGTATCTGTGT 58.460 47.619 0.00 0.00 0.00 3.72
4793 6802 3.616956 TTCTCCCTTGCTGTATCTGTG 57.383 47.619 0.00 0.00 0.00 3.66
4794 6803 4.640771 TTTTCTCCCTTGCTGTATCTGT 57.359 40.909 0.00 0.00 0.00 3.41
4795 6804 4.578105 GGATTTTCTCCCTTGCTGTATCTG 59.422 45.833 0.00 0.00 38.19 2.90
4796 6805 4.786425 GGATTTTCTCCCTTGCTGTATCT 58.214 43.478 0.00 0.00 38.19 1.98
4808 6817 2.514458 TGCCTTGAGGGATTTTCTCC 57.486 50.000 0.00 0.00 44.11 3.71
4809 6818 4.871933 TTTTGCCTTGAGGGATTTTCTC 57.128 40.909 0.00 0.00 34.74 2.87
4810 6819 5.280164 GGAATTTTGCCTTGAGGGATTTTCT 60.280 40.000 0.00 0.00 34.74 2.52
4811 6820 4.937620 GGAATTTTGCCTTGAGGGATTTTC 59.062 41.667 0.00 0.73 34.74 2.29
4812 6821 4.263462 GGGAATTTTGCCTTGAGGGATTTT 60.263 41.667 0.00 0.00 34.74 1.82
4813 6822 3.264193 GGGAATTTTGCCTTGAGGGATTT 59.736 43.478 0.00 0.00 34.74 2.17
4814 6823 2.840038 GGGAATTTTGCCTTGAGGGATT 59.160 45.455 0.00 0.00 34.74 3.01
4815 6824 2.470990 GGGAATTTTGCCTTGAGGGAT 58.529 47.619 0.00 0.00 34.74 3.85
4816 6825 1.552254 GGGGAATTTTGCCTTGAGGGA 60.552 52.381 0.69 0.00 38.90 4.20
4817 6826 0.904649 GGGGAATTTTGCCTTGAGGG 59.095 55.000 0.69 0.00 38.90 4.30
4818 6827 1.942776 AGGGGAATTTTGCCTTGAGG 58.057 50.000 0.69 0.00 38.90 3.86
4819 6828 4.772100 TCTTTAGGGGAATTTTGCCTTGAG 59.228 41.667 0.69 0.00 38.90 3.02
4820 6829 4.746466 TCTTTAGGGGAATTTTGCCTTGA 58.254 39.130 0.69 0.00 38.90 3.02
4821 6830 5.482163 TTCTTTAGGGGAATTTTGCCTTG 57.518 39.130 0.69 0.00 38.90 3.61
4822 6831 5.513094 GCTTTCTTTAGGGGAATTTTGCCTT 60.513 40.000 0.69 0.00 38.90 4.35
4823 6832 4.020218 GCTTTCTTTAGGGGAATTTTGCCT 60.020 41.667 0.69 0.00 38.90 4.75
4824 6833 4.253685 GCTTTCTTTAGGGGAATTTTGCC 58.746 43.478 0.00 0.00 38.05 4.52
4825 6834 4.893608 TGCTTTCTTTAGGGGAATTTTGC 58.106 39.130 0.00 0.00 0.00 3.68
4826 6835 4.931601 GCTGCTTTCTTTAGGGGAATTTTG 59.068 41.667 0.00 0.00 0.00 2.44
4827 6836 4.840680 AGCTGCTTTCTTTAGGGGAATTTT 59.159 37.500 0.00 0.00 0.00 1.82
4828 6837 4.420206 AGCTGCTTTCTTTAGGGGAATTT 58.580 39.130 0.00 0.00 0.00 1.82
4829 6838 4.053009 AGCTGCTTTCTTTAGGGGAATT 57.947 40.909 0.00 0.00 0.00 2.17
4830 6839 3.746792 AGCTGCTTTCTTTAGGGGAAT 57.253 42.857 0.00 0.00 0.00 3.01
4831 6840 3.525800 AAGCTGCTTTCTTTAGGGGAA 57.474 42.857 9.53 0.00 0.00 3.97
4832 6841 3.181434 TGAAAGCTGCTTTCTTTAGGGGA 60.181 43.478 39.23 23.23 46.84 4.81
4833 6842 3.157087 TGAAAGCTGCTTTCTTTAGGGG 58.843 45.455 39.23 0.00 46.84 4.79
4834 6843 4.550422 GTTGAAAGCTGCTTTCTTTAGGG 58.450 43.478 39.23 0.00 46.84 3.53
4835 6844 4.037923 TGGTTGAAAGCTGCTTTCTTTAGG 59.962 41.667 39.23 0.00 46.84 2.69
4836 6845 5.186996 TGGTTGAAAGCTGCTTTCTTTAG 57.813 39.130 39.23 0.00 46.84 1.85
4837 6846 5.451798 CCTTGGTTGAAAGCTGCTTTCTTTA 60.452 40.000 39.23 27.38 46.84 1.85
4838 6847 4.436332 CTTGGTTGAAAGCTGCTTTCTTT 58.564 39.130 39.23 18.20 46.84 2.52
4839 6848 3.181472 CCTTGGTTGAAAGCTGCTTTCTT 60.181 43.478 39.23 18.54 46.84 2.52
4840 6849 2.363359 CCTTGGTTGAAAGCTGCTTTCT 59.637 45.455 39.23 19.21 46.84 2.52
4841 6850 2.362077 TCCTTGGTTGAAAGCTGCTTTC 59.638 45.455 36.13 36.13 46.88 2.62
4842 6851 2.387757 TCCTTGGTTGAAAGCTGCTTT 58.612 42.857 26.30 26.30 36.29 3.51
4843 6852 2.071778 TCCTTGGTTGAAAGCTGCTT 57.928 45.000 9.53 9.53 0.00 3.91
4844 6853 2.299326 ATCCTTGGTTGAAAGCTGCT 57.701 45.000 0.00 0.00 0.00 4.24
4845 6854 3.391506 AAATCCTTGGTTGAAAGCTGC 57.608 42.857 0.00 0.00 0.00 5.25
4846 6855 4.986659 CAGAAAATCCTTGGTTGAAAGCTG 59.013 41.667 0.00 0.00 0.00 4.24
4847 6856 4.895297 TCAGAAAATCCTTGGTTGAAAGCT 59.105 37.500 0.00 0.00 0.00 3.74
4848 6857 4.984785 GTCAGAAAATCCTTGGTTGAAAGC 59.015 41.667 0.00 0.00 0.00 3.51
4849 6858 5.215160 CGTCAGAAAATCCTTGGTTGAAAG 58.785 41.667 0.00 0.00 0.00 2.62
4850 6859 4.642885 ACGTCAGAAAATCCTTGGTTGAAA 59.357 37.500 0.00 0.00 0.00 2.69
4851 6860 4.204012 ACGTCAGAAAATCCTTGGTTGAA 58.796 39.130 0.00 0.00 0.00 2.69
4852 6861 3.813166 GACGTCAGAAAATCCTTGGTTGA 59.187 43.478 11.55 0.00 0.00 3.18
4853 6862 3.815401 AGACGTCAGAAAATCCTTGGTTG 59.185 43.478 19.50 0.00 0.00 3.77
4854 6863 3.815401 CAGACGTCAGAAAATCCTTGGTT 59.185 43.478 19.50 0.00 0.00 3.67
4855 6864 3.403038 CAGACGTCAGAAAATCCTTGGT 58.597 45.455 19.50 0.00 0.00 3.67
4856 6865 2.160417 GCAGACGTCAGAAAATCCTTGG 59.840 50.000 19.50 0.00 0.00 3.61
4857 6866 2.159787 CGCAGACGTCAGAAAATCCTTG 60.160 50.000 19.50 4.01 33.53 3.61
4858 6867 2.069273 CGCAGACGTCAGAAAATCCTT 58.931 47.619 19.50 0.00 33.53 3.36
4859 6868 1.714794 CGCAGACGTCAGAAAATCCT 58.285 50.000 19.50 0.00 33.53 3.24
4860 6869 0.095417 GCGCAGACGTCAGAAAATCC 59.905 55.000 19.50 0.00 42.83 3.01
4861 6870 0.095417 GGCGCAGACGTCAGAAAATC 59.905 55.000 19.50 0.00 45.32 2.17
4862 6871 2.162716 GGCGCAGACGTCAGAAAAT 58.837 52.632 19.50 0.00 45.32 1.82
4863 6872 3.637714 GGCGCAGACGTCAGAAAA 58.362 55.556 19.50 0.00 45.32 2.29
4869 6878 4.166011 GCATTGGGCGCAGACGTC 62.166 66.667 10.83 7.70 45.25 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.