Multiple sequence alignment - TraesCS3A01G189300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G189300 chr3A 100.000 6451 0 0 1 6451 231677149 231670699 0.000000e+00 11913.0
1 TraesCS3A01G189300 chr3A 91.000 100 7 2 37 135 159998203 159998105 4.060000e-27 134.0
2 TraesCS3A01G189300 chr3A 89.474 57 6 0 2506 2562 41179389 41179445 8.970000e-09 73.1
3 TraesCS3A01G189300 chr3A 92.157 51 4 0 2506 2556 264939874 264939824 8.970000e-09 73.1
4 TraesCS3A01G189300 chr3A 86.667 60 8 0 2506 2565 697060297 697060238 4.170000e-07 67.6
5 TraesCS3A01G189300 chr3D 93.837 5890 185 76 655 6451 182600989 182595185 0.000000e+00 8702.0
6 TraesCS3A01G189300 chr3D 92.398 171 8 4 445 615 182601602 182601437 8.360000e-59 239.0
7 TraesCS3A01G189300 chr3D 92.308 52 4 0 2506 2557 572127474 572127423 2.490000e-09 75.0
8 TraesCS3A01G189300 chr3B 92.155 2575 104 39 3947 6451 261789764 261787218 0.000000e+00 3546.0
9 TraesCS3A01G189300 chr3B 84.440 919 94 18 2550 3440 261791298 261790401 0.000000e+00 859.0
10 TraesCS3A01G189300 chr3B 91.379 638 18 11 655 1279 261793248 261792635 0.000000e+00 839.0
11 TraesCS3A01G189300 chr3B 82.940 551 52 18 1652 2192 261792213 261791695 5.890000e-125 459.0
12 TraesCS3A01G189300 chr3B 82.617 512 30 19 3475 3942 261790330 261789834 1.300000e-106 398.0
13 TraesCS3A01G189300 chr3B 89.912 228 13 6 389 615 261793820 261793602 1.060000e-72 285.0
14 TraesCS3A01G189300 chr3B 85.000 220 27 4 2214 2430 261791515 261791299 1.090000e-52 219.0
15 TraesCS3A01G189300 chr3B 93.506 77 4 1 1318 1393 261792628 261792552 5.290000e-21 113.0
16 TraesCS3A01G189300 chr3B 92.857 56 3 1 3351 3405 261790403 261790348 5.360000e-11 80.5
17 TraesCS3A01G189300 chr3B 84.615 65 10 0 1545 1609 261792361 261792297 1.500000e-06 65.8
18 TraesCS3A01G189300 chr1A 97.884 378 7 1 13 389 84444912 84445289 0.000000e+00 652.0
19 TraesCS3A01G189300 chr1A 100.000 36 0 0 2449 2484 23967722 23967687 4.170000e-07 67.6
20 TraesCS3A01G189300 chr5B 88.630 387 26 12 13 385 594269484 594269102 7.620000e-124 455.0
21 TraesCS3A01G189300 chr2A 76.518 494 96 18 4087 4569 779820726 779820242 1.070000e-62 252.0
22 TraesCS3A01G189300 chr2A 86.000 200 24 3 1075 1272 779822228 779822031 1.820000e-50 211.0
23 TraesCS3A01G189300 chr2B 86.000 200 24 3 1075 1272 776811990 776812187 1.820000e-50 211.0
24 TraesCS3A01G189300 chr2D 85.500 200 25 3 1075 1272 633847768 633847965 8.480000e-49 206.0
25 TraesCS3A01G189300 chr1D 97.619 42 0 1 2449 2489 465887187 465887228 3.230000e-08 71.3
26 TraesCS3A01G189300 chr1D 100.000 36 0 0 2449 2484 120536312 120536277 4.170000e-07 67.6
27 TraesCS3A01G189300 chr1D 95.238 42 1 1 2449 2489 364767568 364767527 1.500000e-06 65.8
28 TraesCS3A01G189300 chr7D 97.500 40 1 0 2445 2484 397578599 397578560 1.160000e-07 69.4
29 TraesCS3A01G189300 chr4A 97.561 41 0 1 2449 2488 649174359 649174399 1.160000e-07 69.4
30 TraesCS3A01G189300 chr5A 87.931 58 6 1 2506 2562 694973877 694973934 4.170000e-07 67.6
31 TraesCS3A01G189300 chr4D 100.000 36 0 0 2449 2484 109275015 109275050 4.170000e-07 67.6
32 TraesCS3A01G189300 chr4B 100.000 36 0 0 2449 2484 167350039 167350004 4.170000e-07 67.6
33 TraesCS3A01G189300 chr7A 84.848 66 9 1 2506 2571 133053292 133053356 1.500000e-06 65.8
34 TraesCS3A01G189300 chr7A 77.419 124 19 6 2449 2564 704234593 704234471 1.500000e-06 65.8
35 TraesCS3A01G189300 chr7A 77.419 124 19 6 2449 2564 704255903 704255781 1.500000e-06 65.8
36 TraesCS3A01G189300 chr6B 97.059 34 1 0 356 389 132949658 132949625 2.510000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G189300 chr3A 231670699 231677149 6450 True 11913.00 11913 100.0000 1 6451 1 chr3A.!!$R2 6450
1 TraesCS3A01G189300 chr3D 182595185 182601602 6417 True 4470.50 8702 93.1175 445 6451 2 chr3D.!!$R2 6006
2 TraesCS3A01G189300 chr3B 261787218 261793820 6602 True 686.43 3546 87.9421 389 6451 10 chr3B.!!$R1 6062
3 TraesCS3A01G189300 chr2A 779820242 779822228 1986 True 231.50 252 81.2590 1075 4569 2 chr2A.!!$R1 3494

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
187 188 0.038166 ACGCCACCATCAACCAAGAT 59.962 50.000 0.00 0.0 0.00 2.40 F
454 455 0.103937 TCTTGCGTTTGGCTTTTGGG 59.896 50.000 0.00 0.0 44.05 4.12 F
722 1204 0.108585 CCGGAGAGAGAGGGAGAGAG 59.891 65.000 0.00 0.0 0.00 3.20 F
2021 2696 0.095417 GACGAACTGCCGAAATGCTC 59.905 55.000 0.00 0.0 0.00 4.26 F
2672 3724 4.431416 TCAGGTCCTTAGCAACTTTCAA 57.569 40.909 0.00 0.0 0.00 2.69 F
2986 4067 3.973425 AGCCTAGCTGGATTTTGATTGT 58.027 40.909 0.00 0.0 37.57 2.71 F
4579 5833 4.009675 GTCAAAGGTATGCCATTGTCTCA 58.990 43.478 15.95 0.0 42.35 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1518 2031 0.104356 TACAACCCCACCCAAGGAGA 60.104 55.000 0.00 0.00 0.00 3.71 R
1519 2032 0.774908 TTACAACCCCACCCAAGGAG 59.225 55.000 0.00 0.00 0.00 3.69 R
2276 3324 1.621317 TGTGCGGGTGACATAGAAGAA 59.379 47.619 0.00 0.00 0.00 2.52 R
2986 4067 1.613925 ACTCGACAACAGCAAGCTAGA 59.386 47.619 0.00 0.00 0.00 2.43 R
4098 5351 0.106167 TACGGATCTCTGGACCCTGG 60.106 60.000 0.00 0.00 0.00 4.45 R
4724 5988 7.507829 AGATCTTCTCTACAGGAATTTCCATG 58.492 38.462 17.57 13.86 33.27 3.66 R
6305 7619 0.529378 CCACCACCTACGTCACCTAC 59.471 60.000 0.00 0.00 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.238084 AGTACCATGACTGAGAGGCA 57.762 50.000 0.00 0.00 37.84 4.75
24 25 2.540383 AGTACCATGACTGAGAGGCAA 58.460 47.619 0.00 0.00 36.42 4.52
25 26 3.110705 AGTACCATGACTGAGAGGCAAT 58.889 45.455 0.00 0.00 36.42 3.56
26 27 4.290093 AGTACCATGACTGAGAGGCAATA 58.710 43.478 0.00 0.00 36.42 1.90
27 28 4.716784 AGTACCATGACTGAGAGGCAATAA 59.283 41.667 0.00 0.00 36.42 1.40
28 29 4.785346 ACCATGACTGAGAGGCAATAAT 57.215 40.909 0.00 0.00 36.42 1.28
29 30 4.458397 ACCATGACTGAGAGGCAATAATG 58.542 43.478 0.00 0.00 36.42 1.90
30 31 3.819337 CCATGACTGAGAGGCAATAATGG 59.181 47.826 0.00 0.00 36.42 3.16
31 32 4.458397 CATGACTGAGAGGCAATAATGGT 58.542 43.478 0.00 0.00 36.42 3.55
32 33 4.574674 TGACTGAGAGGCAATAATGGTT 57.425 40.909 0.00 0.00 23.92 3.67
33 34 4.922206 TGACTGAGAGGCAATAATGGTTT 58.078 39.130 0.00 0.00 23.92 3.27
34 35 4.943705 TGACTGAGAGGCAATAATGGTTTC 59.056 41.667 0.00 0.00 23.92 2.78
35 36 4.922206 ACTGAGAGGCAATAATGGTTTCA 58.078 39.130 0.00 0.00 0.00 2.69
36 37 5.324409 ACTGAGAGGCAATAATGGTTTCAA 58.676 37.500 0.00 0.00 0.00 2.69
37 38 5.954150 ACTGAGAGGCAATAATGGTTTCAAT 59.046 36.000 0.00 0.00 0.00 2.57
38 39 6.096001 ACTGAGAGGCAATAATGGTTTCAATC 59.904 38.462 0.00 0.00 0.00 2.67
39 40 5.360714 TGAGAGGCAATAATGGTTTCAATCC 59.639 40.000 0.00 0.00 0.00 3.01
40 41 5.271598 AGAGGCAATAATGGTTTCAATCCA 58.728 37.500 0.00 0.00 39.41 3.41
41 42 5.361857 AGAGGCAATAATGGTTTCAATCCAG 59.638 40.000 0.00 0.00 38.42 3.86
42 43 5.025453 AGGCAATAATGGTTTCAATCCAGT 58.975 37.500 0.00 0.00 38.42 4.00
43 44 6.194235 AGGCAATAATGGTTTCAATCCAGTA 58.806 36.000 0.00 0.00 39.30 2.74
44 45 6.096846 AGGCAATAATGGTTTCAATCCAGTAC 59.903 38.462 0.00 0.00 38.13 2.73
45 46 6.127479 GGCAATAATGGTTTCAATCCAGTACA 60.127 38.462 0.00 0.00 38.13 2.90
46 47 7.319646 GCAATAATGGTTTCAATCCAGTACAA 58.680 34.615 0.00 0.00 38.13 2.41
47 48 7.816995 GCAATAATGGTTTCAATCCAGTACAAA 59.183 33.333 0.00 0.00 38.13 2.83
48 49 9.357652 CAATAATGGTTTCAATCCAGTACAAAG 57.642 33.333 0.00 0.00 38.13 2.77
49 50 6.976934 AATGGTTTCAATCCAGTACAAAGT 57.023 33.333 0.00 0.00 38.42 2.66
50 51 9.747898 ATAATGGTTTCAATCCAGTACAAAGTA 57.252 29.630 0.00 0.00 38.13 2.24
51 52 7.687941 ATGGTTTCAATCCAGTACAAAGTAG 57.312 36.000 0.00 0.00 38.42 2.57
52 53 6.833041 TGGTTTCAATCCAGTACAAAGTAGA 58.167 36.000 0.00 0.00 0.00 2.59
53 54 7.284074 TGGTTTCAATCCAGTACAAAGTAGAA 58.716 34.615 0.00 0.00 0.00 2.10
54 55 7.776030 TGGTTTCAATCCAGTACAAAGTAGAAA 59.224 33.333 0.00 0.00 0.00 2.52
55 56 8.626526 GGTTTCAATCCAGTACAAAGTAGAAAA 58.373 33.333 0.00 0.00 0.00 2.29
59 60 9.793259 TCAATCCAGTACAAAGTAGAAAATTCT 57.207 29.630 0.77 0.77 41.24 2.40
89 90 9.416794 CTCATCTAATATACAAACTGTAGCTGG 57.583 37.037 0.00 0.00 36.14 4.85
90 91 9.143155 TCATCTAATATACAAACTGTAGCTGGA 57.857 33.333 0.00 0.00 36.14 3.86
91 92 9.416794 CATCTAATATACAAACTGTAGCTGGAG 57.583 37.037 0.00 0.00 36.14 3.86
92 93 7.434492 TCTAATATACAAACTGTAGCTGGAGC 58.566 38.462 0.00 0.00 36.14 4.70
106 107 4.972514 GCTGGAGCTTTAAGCAAGTATT 57.027 40.909 19.63 0.00 45.56 1.89
108 109 6.054035 GCTGGAGCTTTAAGCAAGTATTAG 57.946 41.667 19.63 8.04 45.56 1.73
109 110 5.586643 GCTGGAGCTTTAAGCAAGTATTAGT 59.413 40.000 19.63 0.00 45.56 2.24
110 111 6.094186 GCTGGAGCTTTAAGCAAGTATTAGTT 59.906 38.462 19.63 0.00 45.56 2.24
111 112 7.611213 TGGAGCTTTAAGCAAGTATTAGTTC 57.389 36.000 19.63 3.56 45.56 3.01
112 113 7.165485 TGGAGCTTTAAGCAAGTATTAGTTCA 58.835 34.615 19.63 0.00 45.56 3.18
113 114 7.334421 TGGAGCTTTAAGCAAGTATTAGTTCAG 59.666 37.037 19.63 0.00 45.56 3.02
114 115 7.334671 GGAGCTTTAAGCAAGTATTAGTTCAGT 59.665 37.037 19.63 0.00 45.56 3.41
115 116 8.622948 AGCTTTAAGCAAGTATTAGTTCAGTT 57.377 30.769 19.63 0.00 45.56 3.16
116 117 8.722394 AGCTTTAAGCAAGTATTAGTTCAGTTC 58.278 33.333 19.63 0.00 45.56 3.01
117 118 8.722394 GCTTTAAGCAAGTATTAGTTCAGTTCT 58.278 33.333 12.54 0.00 41.89 3.01
120 121 9.772973 TTAAGCAAGTATTAGTTCAGTTCTTCA 57.227 29.630 0.00 0.00 0.00 3.02
121 122 8.677148 AAGCAAGTATTAGTTCAGTTCTTCAA 57.323 30.769 0.00 0.00 0.00 2.69
122 123 8.089115 AGCAAGTATTAGTTCAGTTCTTCAAC 57.911 34.615 0.00 0.00 0.00 3.18
123 124 7.715249 AGCAAGTATTAGTTCAGTTCTTCAACA 59.285 33.333 0.00 0.00 34.60 3.33
124 125 8.342634 GCAAGTATTAGTTCAGTTCTTCAACAA 58.657 33.333 0.00 0.00 34.60 2.83
127 128 9.778741 AGTATTAGTTCAGTTCTTCAACAATGA 57.221 29.630 0.00 0.00 34.60 2.57
132 133 8.862550 AGTTCAGTTCTTCAACAATGAATTTC 57.137 30.769 0.00 0.00 44.29 2.17
133 134 7.922811 AGTTCAGTTCTTCAACAATGAATTTCC 59.077 33.333 0.00 0.00 44.29 3.13
134 135 6.748132 TCAGTTCTTCAACAATGAATTTCCC 58.252 36.000 0.00 0.00 44.29 3.97
135 136 6.550854 TCAGTTCTTCAACAATGAATTTCCCT 59.449 34.615 0.00 0.00 44.29 4.20
136 137 7.723616 TCAGTTCTTCAACAATGAATTTCCCTA 59.276 33.333 0.00 0.00 44.29 3.53
137 138 8.526147 CAGTTCTTCAACAATGAATTTCCCTAT 58.474 33.333 0.00 0.00 44.29 2.57
138 139 9.093458 AGTTCTTCAACAATGAATTTCCCTATT 57.907 29.630 0.00 0.00 44.29 1.73
139 140 9.710900 GTTCTTCAACAATGAATTTCCCTATTT 57.289 29.630 0.00 0.00 44.29 1.40
140 141 9.927668 TTCTTCAACAATGAATTTCCCTATTTC 57.072 29.630 0.00 0.00 44.29 2.17
141 142 9.312904 TCTTCAACAATGAATTTCCCTATTTCT 57.687 29.630 0.00 0.00 44.29 2.52
144 145 8.686334 TCAACAATGAATTTCCCTATTTCTAGC 58.314 33.333 0.00 0.00 30.99 3.42
145 146 7.588497 ACAATGAATTTCCCTATTTCTAGCC 57.412 36.000 0.00 0.00 0.00 3.93
146 147 7.125391 ACAATGAATTTCCCTATTTCTAGCCA 58.875 34.615 0.00 0.00 0.00 4.75
147 148 7.619302 ACAATGAATTTCCCTATTTCTAGCCAA 59.381 33.333 0.00 0.00 0.00 4.52
148 149 8.645110 CAATGAATTTCCCTATTTCTAGCCAAT 58.355 33.333 0.00 0.00 0.00 3.16
149 150 8.788238 ATGAATTTCCCTATTTCTAGCCAATT 57.212 30.769 0.00 0.00 0.00 2.32
150 151 8.237811 TGAATTTCCCTATTTCTAGCCAATTC 57.762 34.615 0.00 0.00 31.58 2.17
151 152 7.838696 TGAATTTCCCTATTTCTAGCCAATTCA 59.161 33.333 0.00 0.00 34.63 2.57
152 153 8.608185 AATTTCCCTATTTCTAGCCAATTCAA 57.392 30.769 0.00 0.00 0.00 2.69
153 154 8.788238 ATTTCCCTATTTCTAGCCAATTCAAT 57.212 30.769 0.00 0.00 0.00 2.57
154 155 9.881773 ATTTCCCTATTTCTAGCCAATTCAATA 57.118 29.630 0.00 0.00 0.00 1.90
155 156 8.924511 TTCCCTATTTCTAGCCAATTCAATAG 57.075 34.615 0.00 0.00 0.00 1.73
156 157 8.275187 TCCCTATTTCTAGCCAATTCAATAGA 57.725 34.615 0.00 0.00 0.00 1.98
157 158 8.723365 TCCCTATTTCTAGCCAATTCAATAGAA 58.277 33.333 0.00 0.00 38.31 2.10
158 159 9.354673 CCCTATTTCTAGCCAATTCAATAGAAA 57.645 33.333 13.69 13.69 44.16 2.52
168 169 9.612066 AGCCAATTCAATAGAAAACTTTTTCAA 57.388 25.926 15.14 2.85 46.81 2.69
169 170 9.650371 GCCAATTCAATAGAAAACTTTTTCAAC 57.350 29.630 15.14 0.00 46.81 3.18
170 171 9.848172 CCAATTCAATAGAAAACTTTTTCAACG 57.152 29.630 15.14 3.13 46.81 4.10
171 172 9.356929 CAATTCAATAGAAAACTTTTTCAACGC 57.643 29.630 15.14 0.00 46.81 4.84
172 173 7.458038 TTCAATAGAAAACTTTTTCAACGCC 57.542 32.000 15.14 0.00 46.81 5.68
173 174 6.565234 TCAATAGAAAACTTTTTCAACGCCA 58.435 32.000 15.14 0.00 46.81 5.69
174 175 6.474102 TCAATAGAAAACTTTTTCAACGCCAC 59.526 34.615 15.14 0.00 46.81 5.01
175 176 3.517602 AGAAAACTTTTTCAACGCCACC 58.482 40.909 15.14 0.00 46.81 4.61
176 177 3.056465 AGAAAACTTTTTCAACGCCACCA 60.056 39.130 15.14 0.00 46.81 4.17
177 178 3.535280 AAACTTTTTCAACGCCACCAT 57.465 38.095 0.00 0.00 0.00 3.55
178 179 2.793278 ACTTTTTCAACGCCACCATC 57.207 45.000 0.00 0.00 0.00 3.51
179 180 2.028130 ACTTTTTCAACGCCACCATCA 58.972 42.857 0.00 0.00 0.00 3.07
180 181 2.428890 ACTTTTTCAACGCCACCATCAA 59.571 40.909 0.00 0.00 0.00 2.57
181 182 2.500509 TTTTCAACGCCACCATCAAC 57.499 45.000 0.00 0.00 0.00 3.18
182 183 0.671251 TTTCAACGCCACCATCAACC 59.329 50.000 0.00 0.00 0.00 3.77
183 184 0.466372 TTCAACGCCACCATCAACCA 60.466 50.000 0.00 0.00 0.00 3.67
184 185 0.466372 TCAACGCCACCATCAACCAA 60.466 50.000 0.00 0.00 0.00 3.67
185 186 0.039256 CAACGCCACCATCAACCAAG 60.039 55.000 0.00 0.00 0.00 3.61
186 187 0.179004 AACGCCACCATCAACCAAGA 60.179 50.000 0.00 0.00 0.00 3.02
187 188 0.038166 ACGCCACCATCAACCAAGAT 59.962 50.000 0.00 0.00 0.00 2.40
188 189 0.734889 CGCCACCATCAACCAAGATC 59.265 55.000 0.00 0.00 0.00 2.75
189 190 1.679944 CGCCACCATCAACCAAGATCT 60.680 52.381 0.00 0.00 0.00 2.75
190 191 2.419990 CGCCACCATCAACCAAGATCTA 60.420 50.000 0.00 0.00 0.00 1.98
191 192 3.745480 CGCCACCATCAACCAAGATCTAT 60.745 47.826 0.00 0.00 0.00 1.98
192 193 3.567164 GCCACCATCAACCAAGATCTATG 59.433 47.826 0.00 0.00 0.00 2.23
193 194 4.785301 CCACCATCAACCAAGATCTATGT 58.215 43.478 0.00 0.00 0.00 2.29
194 195 4.577693 CCACCATCAACCAAGATCTATGTG 59.422 45.833 0.00 0.00 0.00 3.21
195 196 5.188434 CACCATCAACCAAGATCTATGTGT 58.812 41.667 0.00 0.00 0.00 3.72
196 197 5.649395 CACCATCAACCAAGATCTATGTGTT 59.351 40.000 0.00 1.76 0.00 3.32
197 198 5.649395 ACCATCAACCAAGATCTATGTGTTG 59.351 40.000 19.09 19.09 33.78 3.33
198 199 5.882000 CCATCAACCAAGATCTATGTGTTGA 59.118 40.000 23.67 23.67 39.72 3.18
199 200 6.183360 CCATCAACCAAGATCTATGTGTTGAC 60.183 42.308 23.78 0.00 39.01 3.18
200 201 5.863965 TCAACCAAGATCTATGTGTTGACA 58.136 37.500 21.14 11.73 35.25 3.58
201 202 6.475504 TCAACCAAGATCTATGTGTTGACAT 58.524 36.000 21.14 0.00 45.24 3.06
202 203 6.595326 TCAACCAAGATCTATGTGTTGACATC 59.405 38.462 21.14 0.00 42.14 3.06
203 204 6.053632 ACCAAGATCTATGTGTTGACATCA 57.946 37.500 0.00 0.00 42.14 3.07
204 205 5.877012 ACCAAGATCTATGTGTTGACATCAC 59.123 40.000 9.32 9.32 42.14 3.06
205 206 5.295292 CCAAGATCTATGTGTTGACATCACC 59.705 44.000 12.91 0.00 42.14 4.02
206 207 5.028549 AGATCTATGTGTTGACATCACCC 57.971 43.478 12.91 0.00 42.14 4.61
207 208 4.718774 AGATCTATGTGTTGACATCACCCT 59.281 41.667 12.91 4.67 42.14 4.34
208 209 4.908601 TCTATGTGTTGACATCACCCTT 57.091 40.909 12.91 2.75 42.14 3.95
209 210 4.578871 TCTATGTGTTGACATCACCCTTG 58.421 43.478 12.91 3.79 42.14 3.61
210 211 2.727123 TGTGTTGACATCACCCTTGT 57.273 45.000 12.91 0.00 35.25 3.16
211 212 3.011566 TGTGTTGACATCACCCTTGTT 57.988 42.857 12.91 0.00 35.25 2.83
212 213 3.360867 TGTGTTGACATCACCCTTGTTT 58.639 40.909 12.91 0.00 35.25 2.83
213 214 3.766591 TGTGTTGACATCACCCTTGTTTT 59.233 39.130 12.91 0.00 35.25 2.43
214 215 4.221703 TGTGTTGACATCACCCTTGTTTTT 59.778 37.500 12.91 0.00 35.25 1.94
215 216 4.566360 GTGTTGACATCACCCTTGTTTTTG 59.434 41.667 5.48 0.00 0.00 2.44
216 217 4.119136 GTTGACATCACCCTTGTTTTTGG 58.881 43.478 0.00 0.00 0.00 3.28
217 218 3.370104 TGACATCACCCTTGTTTTTGGT 58.630 40.909 0.00 0.00 0.00 3.67
218 219 4.537751 TGACATCACCCTTGTTTTTGGTA 58.462 39.130 0.00 0.00 0.00 3.25
219 220 4.339814 TGACATCACCCTTGTTTTTGGTAC 59.660 41.667 0.00 0.00 0.00 3.34
220 221 4.542697 ACATCACCCTTGTTTTTGGTACT 58.457 39.130 0.00 0.00 0.00 2.73
221 222 4.959839 ACATCACCCTTGTTTTTGGTACTT 59.040 37.500 0.00 0.00 0.00 2.24
222 223 5.423931 ACATCACCCTTGTTTTTGGTACTTT 59.576 36.000 0.00 0.00 0.00 2.66
223 224 5.585820 TCACCCTTGTTTTTGGTACTTTC 57.414 39.130 0.00 0.00 0.00 2.62
224 225 5.265989 TCACCCTTGTTTTTGGTACTTTCT 58.734 37.500 0.00 0.00 0.00 2.52
225 226 6.424883 TCACCCTTGTTTTTGGTACTTTCTA 58.575 36.000 0.00 0.00 0.00 2.10
226 227 7.064229 TCACCCTTGTTTTTGGTACTTTCTAT 58.936 34.615 0.00 0.00 0.00 1.98
227 228 7.229907 TCACCCTTGTTTTTGGTACTTTCTATC 59.770 37.037 0.00 0.00 0.00 2.08
228 229 7.230712 CACCCTTGTTTTTGGTACTTTCTATCT 59.769 37.037 0.00 0.00 0.00 1.98
229 230 7.783119 ACCCTTGTTTTTGGTACTTTCTATCTT 59.217 33.333 0.00 0.00 0.00 2.40
230 231 8.297426 CCCTTGTTTTTGGTACTTTCTATCTTC 58.703 37.037 0.00 0.00 0.00 2.87
231 232 9.067986 CCTTGTTTTTGGTACTTTCTATCTTCT 57.932 33.333 0.00 0.00 0.00 2.85
237 238 9.720769 TTTTGGTACTTTCTATCTTCTAAGGTG 57.279 33.333 0.00 0.00 0.00 4.00
238 239 8.660295 TTGGTACTTTCTATCTTCTAAGGTGA 57.340 34.615 0.00 0.00 0.00 4.02
239 240 8.660295 TGGTACTTTCTATCTTCTAAGGTGAA 57.340 34.615 0.00 0.00 0.00 3.18
240 241 9.268282 TGGTACTTTCTATCTTCTAAGGTGAAT 57.732 33.333 0.00 0.00 0.00 2.57
241 242 9.752961 GGTACTTTCTATCTTCTAAGGTGAATC 57.247 37.037 0.00 0.00 0.00 2.52
248 249 9.587772 TCTATCTTCTAAGGTGAATCTTTTTCG 57.412 33.333 0.00 0.00 0.00 3.46
249 250 9.587772 CTATCTTCTAAGGTGAATCTTTTTCGA 57.412 33.333 0.00 0.00 0.00 3.71
251 252 8.848474 TCTTCTAAGGTGAATCTTTTTCGATT 57.152 30.769 0.00 0.00 36.38 3.34
252 253 9.284968 TCTTCTAAGGTGAATCTTTTTCGATTT 57.715 29.630 0.00 0.00 33.96 2.17
255 256 9.720769 TCTAAGGTGAATCTTTTTCGATTTACT 57.279 29.630 7.90 0.00 38.91 2.24
258 259 8.622948 AGGTGAATCTTTTTCGATTTACTTCT 57.377 30.769 7.90 0.00 38.91 2.85
259 260 9.720769 AGGTGAATCTTTTTCGATTTACTTCTA 57.279 29.630 7.90 0.00 38.91 2.10
262 263 9.988350 TGAATCTTTTTCGATTTACTTCTATGC 57.012 29.630 0.00 0.00 33.96 3.14
263 264 9.988350 GAATCTTTTTCGATTTACTTCTATGCA 57.012 29.630 0.00 0.00 33.96 3.96
266 267 9.825972 TCTTTTTCGATTTACTTCTATGCAAAG 57.174 29.630 0.00 0.00 0.00 2.77
267 268 9.825972 CTTTTTCGATTTACTTCTATGCAAAGA 57.174 29.630 3.66 0.00 0.00 2.52
268 269 9.607285 TTTTTCGATTTACTTCTATGCAAAGAC 57.393 29.630 3.66 0.00 0.00 3.01
269 270 8.547967 TTTCGATTTACTTCTATGCAAAGACT 57.452 30.769 3.66 0.00 0.00 3.24
270 271 8.547967 TTCGATTTACTTCTATGCAAAGACTT 57.452 30.769 3.66 0.00 0.00 3.01
271 272 8.186178 TCGATTTACTTCTATGCAAAGACTTC 57.814 34.615 3.66 0.00 0.00 3.01
272 273 7.277981 TCGATTTACTTCTATGCAAAGACTTCC 59.722 37.037 3.66 0.00 0.00 3.46
273 274 7.466050 CGATTTACTTCTATGCAAAGACTTCCC 60.466 40.741 3.66 0.00 0.00 3.97
274 275 4.917906 ACTTCTATGCAAAGACTTCCCT 57.082 40.909 3.66 0.00 0.00 4.20
275 276 5.248380 ACTTCTATGCAAAGACTTCCCTT 57.752 39.130 3.66 0.00 0.00 3.95
276 277 5.635120 ACTTCTATGCAAAGACTTCCCTTT 58.365 37.500 3.66 0.00 36.87 3.11
277 278 5.707764 ACTTCTATGCAAAGACTTCCCTTTC 59.292 40.000 3.66 0.00 34.41 2.62
278 279 4.253685 TCTATGCAAAGACTTCCCTTTCG 58.746 43.478 0.00 0.00 34.41 3.46
279 280 2.341846 TGCAAAGACTTCCCTTTCGT 57.658 45.000 0.00 0.00 34.41 3.85
280 281 3.478857 TGCAAAGACTTCCCTTTCGTA 57.521 42.857 0.00 0.00 34.41 3.43
281 282 3.811083 TGCAAAGACTTCCCTTTCGTAA 58.189 40.909 0.00 0.00 34.41 3.18
282 283 4.394729 TGCAAAGACTTCCCTTTCGTAAT 58.605 39.130 0.00 0.00 34.41 1.89
283 284 4.825085 TGCAAAGACTTCCCTTTCGTAATT 59.175 37.500 0.00 0.00 34.41 1.40
284 285 5.998981 TGCAAAGACTTCCCTTTCGTAATTA 59.001 36.000 0.00 0.00 34.41 1.40
285 286 6.657541 TGCAAAGACTTCCCTTTCGTAATTAT 59.342 34.615 0.00 0.00 34.41 1.28
286 287 7.825270 TGCAAAGACTTCCCTTTCGTAATTATA 59.175 33.333 0.00 0.00 34.41 0.98
287 288 8.671028 GCAAAGACTTCCCTTTCGTAATTATAA 58.329 33.333 0.00 0.00 34.41 0.98
289 290 8.434733 AAGACTTCCCTTTCGTAATTATAAGC 57.565 34.615 0.00 0.00 0.00 3.09
290 291 7.793036 AGACTTCCCTTTCGTAATTATAAGCT 58.207 34.615 0.00 0.00 0.00 3.74
291 292 8.265764 AGACTTCCCTTTCGTAATTATAAGCTT 58.734 33.333 3.48 3.48 0.00 3.74
292 293 9.538508 GACTTCCCTTTCGTAATTATAAGCTTA 57.461 33.333 8.99 8.99 0.00 3.09
311 312 8.803397 AAGCTTATCTACGGTTTTCCTATTTT 57.197 30.769 0.00 0.00 37.95 1.82
312 313 8.434733 AGCTTATCTACGGTTTTCCTATTTTC 57.565 34.615 0.00 0.00 37.95 2.29
313 314 8.044908 AGCTTATCTACGGTTTTCCTATTTTCA 58.955 33.333 0.00 0.00 37.95 2.69
314 315 8.671028 GCTTATCTACGGTTTTCCTATTTTCAA 58.329 33.333 0.00 0.00 37.95 2.69
315 316 9.983804 CTTATCTACGGTTTTCCTATTTTCAAC 57.016 33.333 0.00 0.00 37.95 3.18
316 317 9.729281 TTATCTACGGTTTTCCTATTTTCAACT 57.271 29.630 0.00 0.00 37.95 3.16
318 319 9.729281 ATCTACGGTTTTCCTATTTTCAACTAA 57.271 29.630 0.00 0.00 37.95 2.24
319 320 9.558396 TCTACGGTTTTCCTATTTTCAACTAAA 57.442 29.630 0.00 0.00 37.95 1.85
362 363 4.189188 CGTACTGACGGGGAGCGG 62.189 72.222 0.00 0.00 45.63 5.52
363 364 4.509737 GTACTGACGGGGAGCGGC 62.510 72.222 0.00 0.00 0.00 6.53
405 406 2.874701 CCAGTTATGCATACCACAGAGC 59.125 50.000 5.74 0.00 0.00 4.09
408 409 2.509052 TATGCATACCACAGAGCGAC 57.491 50.000 1.16 0.00 0.00 5.19
438 439 7.836183 AGTGGCTTATTTAGTTGATTCCATCTT 59.164 33.333 0.00 0.00 0.00 2.40
454 455 0.103937 TCTTGCGTTTGGCTTTTGGG 59.896 50.000 0.00 0.00 44.05 4.12
458 459 0.878523 GCGTTTGGCTTTTGGGGAAC 60.879 55.000 0.00 0.00 39.11 3.62
499 500 3.721706 GTGGAGCCCCTGACCTGG 61.722 72.222 0.00 0.00 0.00 4.45
505 506 3.775654 CCCCTGACCTGGCGTCTC 61.776 72.222 0.00 0.00 42.49 3.36
506 507 2.681778 CCCTGACCTGGCGTCTCT 60.682 66.667 0.00 0.00 42.49 3.10
507 508 2.286523 CCCTGACCTGGCGTCTCTT 61.287 63.158 0.00 0.00 42.49 2.85
508 509 1.079543 CCTGACCTGGCGTCTCTTG 60.080 63.158 0.00 0.00 42.49 3.02
509 510 1.668294 CTGACCTGGCGTCTCTTGT 59.332 57.895 0.00 0.00 42.49 3.16
675 1157 0.175302 CAGCAGCACAAAACAACCCA 59.825 50.000 0.00 0.00 0.00 4.51
720 1202 0.179029 GACCGGAGAGAGAGGGAGAG 60.179 65.000 9.46 0.00 0.00 3.20
721 1203 0.622154 ACCGGAGAGAGAGGGAGAGA 60.622 60.000 9.46 0.00 0.00 3.10
722 1204 0.108585 CCGGAGAGAGAGGGAGAGAG 59.891 65.000 0.00 0.00 0.00 3.20
723 1205 1.128200 CGGAGAGAGAGGGAGAGAGA 58.872 60.000 0.00 0.00 0.00 3.10
724 1206 1.070758 CGGAGAGAGAGGGAGAGAGAG 59.929 61.905 0.00 0.00 0.00 3.20
725 1207 1.202818 GGAGAGAGAGGGAGAGAGAGC 60.203 61.905 0.00 0.00 0.00 4.09
726 1208 1.771255 GAGAGAGAGGGAGAGAGAGCT 59.229 57.143 0.00 0.00 0.00 4.09
727 1209 1.492176 AGAGAGAGGGAGAGAGAGCTG 59.508 57.143 0.00 0.00 0.00 4.24
728 1210 1.212935 GAGAGAGGGAGAGAGAGCTGT 59.787 57.143 0.00 0.00 0.00 4.40
729 1211 1.212935 AGAGAGGGAGAGAGAGCTGTC 59.787 57.143 1.81 1.81 33.86 3.51
730 1212 0.998928 AGAGGGAGAGAGAGCTGTCA 59.001 55.000 14.08 0.00 36.20 3.58
731 1213 1.357420 AGAGGGAGAGAGAGCTGTCAA 59.643 52.381 14.08 0.00 36.20 3.18
732 1214 1.476488 GAGGGAGAGAGAGCTGTCAAC 59.524 57.143 14.08 6.79 36.20 3.18
754 1239 1.296056 GACCGCCGCCGCATTATTAT 61.296 55.000 0.00 0.00 34.03 1.28
766 1256 1.199097 CATTATTATTCACCCCGCGCC 59.801 52.381 0.00 0.00 0.00 6.53
767 1257 0.535553 TTATTATTCACCCCGCGCCC 60.536 55.000 0.00 0.00 0.00 6.13
768 1258 1.412453 TATTATTCACCCCGCGCCCT 61.412 55.000 0.00 0.00 0.00 5.19
769 1259 2.279037 ATTATTCACCCCGCGCCCTT 62.279 55.000 0.00 0.00 0.00 3.95
943 1443 1.001631 CCAAAGAATCCCCACCCCC 59.998 63.158 0.00 0.00 0.00 5.40
944 1444 1.379843 CAAAGAATCCCCACCCCCG 60.380 63.158 0.00 0.00 0.00 5.73
945 1445 3.296842 AAAGAATCCCCACCCCCGC 62.297 63.158 0.00 0.00 0.00 6.13
1309 1821 2.731691 TTCTTTTGCTCCGCTCCGCT 62.732 55.000 0.00 0.00 0.00 5.52
1310 1822 2.742372 TTTTGCTCCGCTCCGCTC 60.742 61.111 0.00 0.00 0.00 5.03
1342 1854 3.536917 CCGATCTGTGCCCGCCTA 61.537 66.667 0.00 0.00 0.00 3.93
1402 1915 0.249398 TCTAGGTTTTCGGCTGCTCC 59.751 55.000 0.00 0.00 0.00 4.70
1427 1940 4.563976 GGGCATCTTTTCATCGTTGATTTG 59.436 41.667 0.00 0.00 0.00 2.32
1431 1944 7.307337 GGCATCTTTTCATCGTTGATTTGTTTT 60.307 33.333 0.00 0.00 0.00 2.43
1440 1953 8.076781 TCATCGTTGATTTGTTTTTCCGATTAA 58.923 29.630 0.00 0.00 32.08 1.40
1441 1954 8.695284 CATCGTTGATTTGTTTTTCCGATTAAA 58.305 29.630 0.00 0.00 32.08 1.52
1442 1955 8.630278 TCGTTGATTTGTTTTTCCGATTAAAA 57.370 26.923 0.00 0.00 0.00 1.52
1443 1956 9.250624 TCGTTGATTTGTTTTTCCGATTAAAAT 57.749 25.926 0.00 0.00 0.00 1.82
1497 2010 3.948719 GCCTTGTCGTGGTGGGGA 61.949 66.667 0.00 0.00 0.00 4.81
1507 2020 3.893399 GGTGGGGACGTGGGGTTT 61.893 66.667 0.00 0.00 0.00 3.27
1508 2021 2.196502 GTGGGGACGTGGGGTTTT 59.803 61.111 0.00 0.00 0.00 2.43
1509 2022 1.900016 GTGGGGACGTGGGGTTTTC 60.900 63.158 0.00 0.00 0.00 2.29
1510 2023 2.079911 TGGGGACGTGGGGTTTTCT 61.080 57.895 0.00 0.00 0.00 2.52
1511 2024 1.303074 GGGGACGTGGGGTTTTCTC 60.303 63.158 0.00 0.00 0.00 2.87
1512 2025 1.759236 GGGACGTGGGGTTTTCTCT 59.241 57.895 0.00 0.00 0.00 3.10
1513 2026 0.109913 GGGACGTGGGGTTTTCTCTT 59.890 55.000 0.00 0.00 0.00 2.85
1514 2027 1.478105 GGGACGTGGGGTTTTCTCTTT 60.478 52.381 0.00 0.00 0.00 2.52
1515 2028 1.878088 GGACGTGGGGTTTTCTCTTTC 59.122 52.381 0.00 0.00 0.00 2.62
1516 2029 2.486727 GGACGTGGGGTTTTCTCTTTCT 60.487 50.000 0.00 0.00 0.00 2.52
1517 2030 2.806818 GACGTGGGGTTTTCTCTTTCTC 59.193 50.000 0.00 0.00 0.00 2.87
1518 2031 2.438392 ACGTGGGGTTTTCTCTTTCTCT 59.562 45.455 0.00 0.00 0.00 3.10
1519 2032 3.067833 CGTGGGGTTTTCTCTTTCTCTC 58.932 50.000 0.00 0.00 0.00 3.20
1520 2033 3.244249 CGTGGGGTTTTCTCTTTCTCTCT 60.244 47.826 0.00 0.00 0.00 3.10
1521 2034 4.320023 GTGGGGTTTTCTCTTTCTCTCTC 58.680 47.826 0.00 0.00 0.00 3.20
1527 2040 4.899352 TTTCTCTTTCTCTCTCCTTGGG 57.101 45.455 0.00 0.00 0.00 4.12
1535 2048 1.133809 TCTCTCCTTGGGTGGGGTTG 61.134 60.000 0.00 0.00 0.00 3.77
1536 2049 1.386772 TCTCCTTGGGTGGGGTTGT 60.387 57.895 0.00 0.00 0.00 3.32
1537 2050 0.104356 TCTCCTTGGGTGGGGTTGTA 60.104 55.000 0.00 0.00 0.00 2.41
1538 2051 0.774908 CTCCTTGGGTGGGGTTGTAA 59.225 55.000 0.00 0.00 0.00 2.41
1625 2231 0.103026 TGTCGATGCGATCTCCCTTG 59.897 55.000 0.00 0.00 38.42 3.61
1688 2335 2.527487 GCAATTAAAGCGACAGATTGCG 59.473 45.455 10.45 0.00 41.87 4.85
1796 2454 0.179045 ATCGAATGGGCCAGTGTAGC 60.179 55.000 13.03 0.00 0.00 3.58
1857 2524 3.542875 CGATTCGCTAGATTGCAGTTGTG 60.543 47.826 0.00 0.00 0.00 3.33
1880 2547 0.881118 TTCATTTCCTTGTCGGCTGC 59.119 50.000 0.00 0.00 0.00 5.25
1900 2567 1.310933 GGTCCTCATGCTGCAACCAG 61.311 60.000 14.00 7.11 42.13 4.00
1951 2624 4.203226 TGTTGTGGAATGCTTTGTGACTA 58.797 39.130 0.00 0.00 0.00 2.59
1965 2638 4.908601 TGTGACTACCAATGGAGAATGT 57.091 40.909 6.16 0.00 0.00 2.71
1984 2659 4.150897 TGTGTATTATTCTCACCCCAGC 57.849 45.455 0.00 0.00 0.00 4.85
2021 2696 0.095417 GACGAACTGCCGAAATGCTC 59.905 55.000 0.00 0.00 0.00 4.26
2039 2714 9.798885 GAAATGCTCATACAGTATAATTTCGAC 57.201 33.333 0.00 0.00 0.00 4.20
2050 2725 9.591792 ACAGTATAATTTCGACTACTTTAACCC 57.408 33.333 0.00 0.00 0.00 4.11
2094 2769 9.892130 AGAAGCCAAAGTGTAATATATATAGCC 57.108 33.333 0.00 0.00 0.00 3.93
2292 3340 6.371548 TCATTTTCTTTCTTCTATGTCACCCG 59.628 38.462 0.00 0.00 0.00 5.28
2346 3394 5.662208 TCACATCCGAGGGGTAAGTAATTTA 59.338 40.000 0.00 0.00 33.83 1.40
2347 3395 6.156602 TCACATCCGAGGGGTAAGTAATTTAA 59.843 38.462 0.00 0.00 33.83 1.52
2352 3400 5.529800 CCGAGGGGTAAGTAATTTAACATGG 59.470 44.000 0.00 0.00 30.10 3.66
2441 3492 5.014858 CACAGTAAACTAGTACTCCCTCCA 58.985 45.833 0.00 0.00 31.78 3.86
2597 3649 7.959658 ATTTGGATGATGAATGACTAAACCA 57.040 32.000 0.00 0.00 0.00 3.67
2672 3724 4.431416 TCAGGTCCTTAGCAACTTTCAA 57.569 40.909 0.00 0.00 0.00 2.69
2986 4067 3.973425 AGCCTAGCTGGATTTTGATTGT 58.027 40.909 0.00 0.00 37.57 2.71
3254 4338 8.197439 CCTTCTAATCCTCTTTGTTTGTTTTGT 58.803 33.333 0.00 0.00 0.00 2.83
3265 4349 6.654793 TTGTTTGTTTTGTCCTTGTAATGC 57.345 33.333 0.00 0.00 0.00 3.56
3330 4414 8.616076 GGTTATATTGACCAAGTTTCTGATCTG 58.384 37.037 0.00 0.00 37.14 2.90
3363 4459 8.700722 TTATTATGCTGCAACAAAGTTTATGG 57.299 30.769 6.36 0.00 0.00 2.74
3789 4948 7.046891 ACCCTTTTTATCAAGGTGGGTAATA 57.953 36.000 0.00 0.00 43.80 0.98
3971 5224 6.430000 AGTTATCTTGTTTGTGGTGTATGGAC 59.570 38.462 0.00 0.00 0.00 4.02
4579 5833 4.009675 GTCAAAGGTATGCCATTGTCTCA 58.990 43.478 15.95 0.00 42.35 3.27
4724 5988 0.899717 TGGCAAGAGGTGATTTGGGC 60.900 55.000 0.00 0.00 0.00 5.36
5318 6582 1.447317 CTGCCAAGGCGTTTGACAGT 61.447 55.000 6.60 0.00 40.97 3.55
5454 6718 1.344763 AGCTCTTGACCGTGTAAGCTT 59.655 47.619 3.48 3.48 36.75 3.74
5500 6769 2.414250 TGCCTGGGGATTTTCCTTTT 57.586 45.000 0.00 0.00 36.57 2.27
5667 6940 5.803020 GCAGCTTGTTTTGCTACTACTAT 57.197 39.130 0.00 0.00 38.92 2.12
5668 6941 6.903883 GCAGCTTGTTTTGCTACTACTATA 57.096 37.500 0.00 0.00 38.92 1.31
5700 6980 5.528690 TGCAATGATTGAACTACCTGATAGC 59.471 40.000 9.76 0.00 33.73 2.97
5714 6994 4.406972 ACCTGATAGCTGCTTCACTTCATA 59.593 41.667 7.79 0.00 0.00 2.15
5749 7038 9.900710 TGTTGTTTGCGTTATATTTCTAACATT 57.099 25.926 0.00 0.00 32.27 2.71
5752 7041 9.347934 TGTTTGCGTTATATTTCTAACATTTGG 57.652 29.630 0.00 0.00 32.27 3.28
5753 7042 9.349145 GTTTGCGTTATATTTCTAACATTTGGT 57.651 29.630 0.00 0.00 32.27 3.67
5754 7043 9.562583 TTTGCGTTATATTTCTAACATTTGGTC 57.437 29.630 0.00 0.00 32.27 4.02
5755 7044 8.500753 TGCGTTATATTTCTAACATTTGGTCT 57.499 30.769 0.00 0.00 32.27 3.85
5756 7045 9.602568 TGCGTTATATTTCTAACATTTGGTCTA 57.397 29.630 0.00 0.00 32.27 2.59
5791 7080 6.927416 TCAAAATGGTGAAGAAGGATGATTG 58.073 36.000 0.00 0.00 0.00 2.67
5793 7082 6.521151 AAATGGTGAAGAAGGATGATTGAC 57.479 37.500 0.00 0.00 0.00 3.18
5796 7085 4.761739 TGGTGAAGAAGGATGATTGACAAC 59.238 41.667 0.00 0.00 0.00 3.32
5808 7097 7.120579 AGGATGATTGACAACATAAAAGCGTTA 59.879 33.333 0.00 0.00 0.00 3.18
5810 7099 7.428282 TGATTGACAACATAAAAGCGTTAGA 57.572 32.000 0.00 0.00 0.00 2.10
5817 7114 9.982291 GACAACATAAAAGCGTTAGATCAATTA 57.018 29.630 0.00 0.00 0.00 1.40
5824 7121 3.815401 AGCGTTAGATCAATTATGCCCAC 59.185 43.478 0.00 0.00 0.00 4.61
5827 7124 4.574421 CGTTAGATCAATTATGCCCACACA 59.426 41.667 0.00 0.00 0.00 3.72
5828 7125 5.504010 CGTTAGATCAATTATGCCCACACAC 60.504 44.000 0.00 0.00 0.00 3.82
5829 7126 4.240881 AGATCAATTATGCCCACACACT 57.759 40.909 0.00 0.00 0.00 3.55
5830 7127 4.202441 AGATCAATTATGCCCACACACTC 58.798 43.478 0.00 0.00 0.00 3.51
5831 7128 3.719268 TCAATTATGCCCACACACTCT 57.281 42.857 0.00 0.00 0.00 3.24
5832 7129 4.032960 TCAATTATGCCCACACACTCTT 57.967 40.909 0.00 0.00 0.00 2.85
5833 7130 3.758023 TCAATTATGCCCACACACTCTTG 59.242 43.478 0.00 0.00 0.00 3.02
5834 7131 3.719268 ATTATGCCCACACACTCTTGA 57.281 42.857 0.00 0.00 0.00 3.02
5835 7132 3.500448 TTATGCCCACACACTCTTGAA 57.500 42.857 0.00 0.00 0.00 2.69
5838 7135 2.229792 TGCCCACACACTCTTGAATTC 58.770 47.619 0.00 0.00 0.00 2.17
5839 7136 2.158623 TGCCCACACACTCTTGAATTCT 60.159 45.455 7.05 0.00 0.00 2.40
5840 7137 2.227388 GCCCACACACTCTTGAATTCTG 59.773 50.000 7.05 0.00 0.00 3.02
5841 7138 2.816087 CCCACACACTCTTGAATTCTGG 59.184 50.000 7.05 2.49 0.00 3.86
5844 7141 2.880890 ACACACTCTTGAATTCTGGCAC 59.119 45.455 7.05 0.00 0.00 5.01
5845 7142 2.880268 CACACTCTTGAATTCTGGCACA 59.120 45.455 7.05 0.00 0.00 4.57
5860 7159 2.290641 TGGCACAGGGTTGATTATCGTT 60.291 45.455 0.00 0.00 0.00 3.85
6011 7321 1.199558 GAGAAAAGCTCCAAGCAGCAG 59.800 52.381 1.29 0.00 45.56 4.24
6053 7367 1.153588 GGCAATGGCATCCAAACGG 60.154 57.895 0.00 0.00 43.71 4.44
6054 7368 1.603236 GGCAATGGCATCCAAACGGA 61.603 55.000 0.00 0.00 43.71 4.69
6055 7369 0.179129 GCAATGGCATCCAAACGGAG 60.179 55.000 0.00 0.00 36.95 4.63
6056 7370 0.179129 CAATGGCATCCAAACGGAGC 60.179 55.000 0.00 0.00 36.95 4.70
6057 7371 0.611618 AATGGCATCCAAACGGAGCA 60.612 50.000 0.00 0.00 36.95 4.26
6114 7428 2.742372 CGCCGGAAGTGGAAGTGG 60.742 66.667 5.05 0.00 0.00 4.00
6115 7429 2.747686 GCCGGAAGTGGAAGTGGA 59.252 61.111 5.05 0.00 0.00 4.02
6182 7496 3.071837 TGTATGGACGCCGGCAGA 61.072 61.111 28.98 6.70 0.00 4.26
6305 7619 1.278172 CGTTCACCTCAGCACTGACG 61.278 60.000 0.00 0.00 35.46 4.35
6419 7736 3.138798 GGGCAGGAGCTGTGCATG 61.139 66.667 17.30 0.90 43.12 4.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.137872 CTCTCAGTCATGGTACTGGCC 59.862 57.143 13.06 0.00 45.69 5.36
1 2 1.137872 CCTCTCAGTCATGGTACTGGC 59.862 57.143 13.06 0.00 45.69 4.85
2 3 1.137872 GCCTCTCAGTCATGGTACTGG 59.862 57.143 13.06 5.94 45.69 4.00
3 4 1.827344 TGCCTCTCAGTCATGGTACTG 59.173 52.381 7.99 7.99 46.78 2.74
4 5 2.238084 TGCCTCTCAGTCATGGTACT 57.762 50.000 0.00 0.00 0.00 2.73
5 6 3.550437 ATTGCCTCTCAGTCATGGTAC 57.450 47.619 0.00 0.00 0.00 3.34
6 7 5.455183 CCATTATTGCCTCTCAGTCATGGTA 60.455 44.000 0.00 0.00 0.00 3.25
7 8 4.458397 CATTATTGCCTCTCAGTCATGGT 58.542 43.478 0.00 0.00 0.00 3.55
8 9 3.819337 CCATTATTGCCTCTCAGTCATGG 59.181 47.826 0.00 0.00 0.00 3.66
9 10 4.458397 ACCATTATTGCCTCTCAGTCATG 58.542 43.478 0.00 0.00 0.00 3.07
10 11 4.785346 ACCATTATTGCCTCTCAGTCAT 57.215 40.909 0.00 0.00 0.00 3.06
11 12 4.574674 AACCATTATTGCCTCTCAGTCA 57.425 40.909 0.00 0.00 0.00 3.41
12 13 4.943705 TGAAACCATTATTGCCTCTCAGTC 59.056 41.667 0.00 0.00 0.00 3.51
13 14 4.922206 TGAAACCATTATTGCCTCTCAGT 58.078 39.130 0.00 0.00 0.00 3.41
14 15 5.902613 TTGAAACCATTATTGCCTCTCAG 57.097 39.130 0.00 0.00 0.00 3.35
15 16 5.360714 GGATTGAAACCATTATTGCCTCTCA 59.639 40.000 0.00 0.00 0.00 3.27
16 17 5.360714 TGGATTGAAACCATTATTGCCTCTC 59.639 40.000 0.00 0.00 32.03 3.20
17 18 5.271598 TGGATTGAAACCATTATTGCCTCT 58.728 37.500 0.00 0.00 32.03 3.69
18 19 5.127682 ACTGGATTGAAACCATTATTGCCTC 59.872 40.000 0.00 0.00 36.79 4.70
19 20 5.025453 ACTGGATTGAAACCATTATTGCCT 58.975 37.500 0.00 0.00 36.79 4.75
20 21 5.343307 ACTGGATTGAAACCATTATTGCC 57.657 39.130 0.00 0.00 36.79 4.52
21 22 6.862209 TGTACTGGATTGAAACCATTATTGC 58.138 36.000 0.00 0.00 36.79 3.56
22 23 9.357652 CTTTGTACTGGATTGAAACCATTATTG 57.642 33.333 0.00 0.00 36.79 1.90
23 24 9.088987 ACTTTGTACTGGATTGAAACCATTATT 57.911 29.630 0.00 0.00 36.79 1.40
24 25 8.650143 ACTTTGTACTGGATTGAAACCATTAT 57.350 30.769 0.00 0.00 36.79 1.28
25 26 9.226606 CTACTTTGTACTGGATTGAAACCATTA 57.773 33.333 0.00 0.00 36.79 1.90
26 27 6.976934 ACTTTGTACTGGATTGAAACCATT 57.023 33.333 0.00 0.00 36.79 3.16
27 28 7.458397 TCTACTTTGTACTGGATTGAAACCAT 58.542 34.615 0.00 0.00 36.79 3.55
28 29 6.833041 TCTACTTTGTACTGGATTGAAACCA 58.167 36.000 0.00 0.00 35.96 3.67
29 30 7.739498 TTCTACTTTGTACTGGATTGAAACC 57.261 36.000 0.00 0.00 0.00 3.27
33 34 9.793259 AGAATTTTCTACTTTGTACTGGATTGA 57.207 29.630 0.00 0.00 35.34 2.57
63 64 9.416794 CCAGCTACAGTTTGTATATTAGATGAG 57.583 37.037 0.00 0.00 31.66 2.90
64 65 9.143155 TCCAGCTACAGTTTGTATATTAGATGA 57.857 33.333 0.00 0.00 31.66 2.92
65 66 9.416794 CTCCAGCTACAGTTTGTATATTAGATG 57.583 37.037 0.00 0.00 31.66 2.90
66 67 8.091449 GCTCCAGCTACAGTTTGTATATTAGAT 58.909 37.037 0.00 0.00 38.21 1.98
67 68 7.434492 GCTCCAGCTACAGTTTGTATATTAGA 58.566 38.462 0.00 0.00 38.21 2.10
68 69 7.644986 GCTCCAGCTACAGTTTGTATATTAG 57.355 40.000 0.00 0.00 38.21 1.73
85 86 4.972514 AATACTTGCTTAAAGCTCCAGC 57.027 40.909 5.06 5.06 42.97 4.85
86 87 7.334421 TGAACTAATACTTGCTTAAAGCTCCAG 59.666 37.037 0.00 0.00 42.97 3.86
87 88 7.165485 TGAACTAATACTTGCTTAAAGCTCCA 58.835 34.615 0.00 0.00 42.97 3.86
88 89 7.334671 ACTGAACTAATACTTGCTTAAAGCTCC 59.665 37.037 0.00 0.00 42.97 4.70
89 90 8.257830 ACTGAACTAATACTTGCTTAAAGCTC 57.742 34.615 0.00 0.00 42.97 4.09
90 91 8.622948 AACTGAACTAATACTTGCTTAAAGCT 57.377 30.769 0.00 0.00 42.97 3.74
91 92 8.722394 AGAACTGAACTAATACTTGCTTAAAGC 58.278 33.333 0.00 0.00 42.82 3.51
94 95 9.772973 TGAAGAACTGAACTAATACTTGCTTAA 57.227 29.630 0.00 0.00 0.00 1.85
95 96 9.772973 TTGAAGAACTGAACTAATACTTGCTTA 57.227 29.630 0.00 0.00 0.00 3.09
96 97 8.560374 GTTGAAGAACTGAACTAATACTTGCTT 58.440 33.333 0.00 0.00 0.00 3.91
97 98 7.715249 TGTTGAAGAACTGAACTAATACTTGCT 59.285 33.333 0.00 0.00 32.79 3.91
98 99 7.861630 TGTTGAAGAACTGAACTAATACTTGC 58.138 34.615 0.00 0.00 32.79 4.01
101 102 9.778741 TCATTGTTGAAGAACTGAACTAATACT 57.221 29.630 0.00 0.00 32.79 2.12
106 107 9.950680 GAAATTCATTGTTGAAGAACTGAACTA 57.049 29.630 0.00 0.00 44.75 2.24
107 108 7.922811 GGAAATTCATTGTTGAAGAACTGAACT 59.077 33.333 0.00 0.00 44.75 3.01
108 109 7.169813 GGGAAATTCATTGTTGAAGAACTGAAC 59.830 37.037 0.00 0.00 44.75 3.18
109 110 7.069826 AGGGAAATTCATTGTTGAAGAACTGAA 59.930 33.333 0.00 0.00 44.75 3.02
110 111 6.550854 AGGGAAATTCATTGTTGAAGAACTGA 59.449 34.615 0.00 0.00 44.75 3.41
111 112 6.752168 AGGGAAATTCATTGTTGAAGAACTG 58.248 36.000 0.00 0.00 44.75 3.16
112 113 6.983906 AGGGAAATTCATTGTTGAAGAACT 57.016 33.333 0.00 0.00 44.75 3.01
113 114 9.710900 AAATAGGGAAATTCATTGTTGAAGAAC 57.289 29.630 0.00 0.00 44.75 3.01
114 115 9.927668 GAAATAGGGAAATTCATTGTTGAAGAA 57.072 29.630 0.00 0.00 44.75 2.52
115 116 9.312904 AGAAATAGGGAAATTCATTGTTGAAGA 57.687 29.630 0.00 0.00 44.75 2.87
118 119 8.686334 GCTAGAAATAGGGAAATTCATTGTTGA 58.314 33.333 0.00 0.00 0.00 3.18
119 120 7.922811 GGCTAGAAATAGGGAAATTCATTGTTG 59.077 37.037 0.00 0.00 0.00 3.33
120 121 7.619302 TGGCTAGAAATAGGGAAATTCATTGTT 59.381 33.333 0.00 0.00 0.00 2.83
121 122 7.125391 TGGCTAGAAATAGGGAAATTCATTGT 58.875 34.615 0.00 0.00 0.00 2.71
122 123 7.587037 TGGCTAGAAATAGGGAAATTCATTG 57.413 36.000 0.00 0.00 0.00 2.82
123 124 8.788238 ATTGGCTAGAAATAGGGAAATTCATT 57.212 30.769 0.00 0.00 0.00 2.57
124 125 8.788238 AATTGGCTAGAAATAGGGAAATTCAT 57.212 30.769 0.00 0.00 0.00 2.57
125 126 7.838696 TGAATTGGCTAGAAATAGGGAAATTCA 59.161 33.333 0.00 0.00 38.49 2.57
126 127 8.237811 TGAATTGGCTAGAAATAGGGAAATTC 57.762 34.615 0.00 0.00 33.95 2.17
127 128 8.608185 TTGAATTGGCTAGAAATAGGGAAATT 57.392 30.769 0.00 0.00 0.00 1.82
128 129 8.788238 ATTGAATTGGCTAGAAATAGGGAAAT 57.212 30.769 0.00 0.00 0.00 2.17
129 130 9.354673 CTATTGAATTGGCTAGAAATAGGGAAA 57.645 33.333 0.00 0.00 0.00 3.13
130 131 8.723365 TCTATTGAATTGGCTAGAAATAGGGAA 58.277 33.333 0.00 0.00 31.52 3.97
131 132 8.275187 TCTATTGAATTGGCTAGAAATAGGGA 57.725 34.615 0.00 0.00 31.52 4.20
132 133 8.924511 TTCTATTGAATTGGCTAGAAATAGGG 57.075 34.615 0.00 0.00 31.52 3.53
142 143 9.612066 TTGAAAAAGTTTTCTATTGAATTGGCT 57.388 25.926 15.53 0.00 45.14 4.75
143 144 9.650371 GTTGAAAAAGTTTTCTATTGAATTGGC 57.350 29.630 15.53 0.00 45.14 4.52
144 145 9.848172 CGTTGAAAAAGTTTTCTATTGAATTGG 57.152 29.630 15.53 0.00 45.14 3.16
145 146 9.356929 GCGTTGAAAAAGTTTTCTATTGAATTG 57.643 29.630 15.53 2.94 45.14 2.32
146 147 8.547894 GGCGTTGAAAAAGTTTTCTATTGAATT 58.452 29.630 15.53 0.00 45.14 2.17
147 148 7.708752 TGGCGTTGAAAAAGTTTTCTATTGAAT 59.291 29.630 15.53 0.00 45.14 2.57
148 149 7.009723 GTGGCGTTGAAAAAGTTTTCTATTGAA 59.990 33.333 15.53 1.40 45.14 2.69
149 150 6.474102 GTGGCGTTGAAAAAGTTTTCTATTGA 59.526 34.615 15.53 0.00 45.14 2.57
150 151 6.292114 GGTGGCGTTGAAAAAGTTTTCTATTG 60.292 38.462 15.53 7.89 45.14 1.90
151 152 5.751509 GGTGGCGTTGAAAAAGTTTTCTATT 59.248 36.000 15.53 0.00 45.14 1.73
152 153 5.163499 TGGTGGCGTTGAAAAAGTTTTCTAT 60.163 36.000 15.53 0.00 45.14 1.98
153 154 4.158025 TGGTGGCGTTGAAAAAGTTTTCTA 59.842 37.500 15.53 7.20 45.14 2.10
154 155 3.056465 TGGTGGCGTTGAAAAAGTTTTCT 60.056 39.130 15.53 0.00 45.14 2.52
155 156 3.254892 TGGTGGCGTTGAAAAAGTTTTC 58.745 40.909 9.17 9.17 45.13 2.29
156 157 3.320673 TGGTGGCGTTGAAAAAGTTTT 57.679 38.095 0.00 0.00 0.00 2.43
157 158 3.118956 TGATGGTGGCGTTGAAAAAGTTT 60.119 39.130 0.00 0.00 0.00 2.66
158 159 2.428890 TGATGGTGGCGTTGAAAAAGTT 59.571 40.909 0.00 0.00 0.00 2.66
159 160 2.028130 TGATGGTGGCGTTGAAAAAGT 58.972 42.857 0.00 0.00 0.00 2.66
160 161 2.791383 TGATGGTGGCGTTGAAAAAG 57.209 45.000 0.00 0.00 0.00 2.27
161 162 2.482142 GGTTGATGGTGGCGTTGAAAAA 60.482 45.455 0.00 0.00 0.00 1.94
162 163 1.067821 GGTTGATGGTGGCGTTGAAAA 59.932 47.619 0.00 0.00 0.00 2.29
163 164 0.671251 GGTTGATGGTGGCGTTGAAA 59.329 50.000 0.00 0.00 0.00 2.69
164 165 0.466372 TGGTTGATGGTGGCGTTGAA 60.466 50.000 0.00 0.00 0.00 2.69
165 166 0.466372 TTGGTTGATGGTGGCGTTGA 60.466 50.000 0.00 0.00 0.00 3.18
166 167 0.039256 CTTGGTTGATGGTGGCGTTG 60.039 55.000 0.00 0.00 0.00 4.10
167 168 0.179004 TCTTGGTTGATGGTGGCGTT 60.179 50.000 0.00 0.00 0.00 4.84
168 169 0.038166 ATCTTGGTTGATGGTGGCGT 59.962 50.000 0.00 0.00 0.00 5.68
169 170 0.734889 GATCTTGGTTGATGGTGGCG 59.265 55.000 0.00 0.00 0.00 5.69
170 171 2.134789 AGATCTTGGTTGATGGTGGC 57.865 50.000 0.00 0.00 0.00 5.01
171 172 4.577693 CACATAGATCTTGGTTGATGGTGG 59.422 45.833 0.00 0.00 0.00 4.61
172 173 5.188434 ACACATAGATCTTGGTTGATGGTG 58.812 41.667 0.00 1.98 0.00 4.17
173 174 5.441718 ACACATAGATCTTGGTTGATGGT 57.558 39.130 0.00 0.00 0.00 3.55
174 175 5.882000 TCAACACATAGATCTTGGTTGATGG 59.118 40.000 18.91 7.16 39.51 3.51
175 176 6.372381 TGTCAACACATAGATCTTGGTTGATG 59.628 38.462 22.57 13.73 44.17 3.07
176 177 6.475504 TGTCAACACATAGATCTTGGTTGAT 58.524 36.000 22.57 2.13 44.17 2.57
177 178 5.863965 TGTCAACACATAGATCTTGGTTGA 58.136 37.500 18.91 18.91 41.40 3.18
178 179 6.372381 TGATGTCAACACATAGATCTTGGTTG 59.628 38.462 0.00 10.75 43.79 3.77
179 180 6.372659 GTGATGTCAACACATAGATCTTGGTT 59.627 38.462 0.00 0.00 43.79 3.67
180 181 5.877012 GTGATGTCAACACATAGATCTTGGT 59.123 40.000 0.00 0.00 43.79 3.67
181 182 5.295292 GGTGATGTCAACACATAGATCTTGG 59.705 44.000 14.40 0.00 43.79 3.61
182 183 5.295292 GGGTGATGTCAACACATAGATCTTG 59.705 44.000 14.40 1.85 43.79 3.02
183 184 5.190528 AGGGTGATGTCAACACATAGATCTT 59.809 40.000 14.40 0.00 43.79 2.40
184 185 4.718774 AGGGTGATGTCAACACATAGATCT 59.281 41.667 14.40 0.00 43.79 2.75
185 186 5.028549 AGGGTGATGTCAACACATAGATC 57.971 43.478 14.40 0.00 43.79 2.75
186 187 5.188434 CAAGGGTGATGTCAACACATAGAT 58.812 41.667 14.40 0.00 43.79 1.98
187 188 4.041567 ACAAGGGTGATGTCAACACATAGA 59.958 41.667 14.40 0.00 43.79 1.98
188 189 4.326826 ACAAGGGTGATGTCAACACATAG 58.673 43.478 14.40 4.63 43.79 2.23
189 190 4.365514 ACAAGGGTGATGTCAACACATA 57.634 40.909 14.40 0.00 43.79 2.29
190 191 3.228188 ACAAGGGTGATGTCAACACAT 57.772 42.857 14.40 0.00 46.64 3.21
191 192 2.727123 ACAAGGGTGATGTCAACACA 57.273 45.000 14.40 0.00 39.65 3.72
192 193 4.385358 AAAACAAGGGTGATGTCAACAC 57.615 40.909 4.71 4.71 34.61 3.32
193 194 4.382470 CCAAAAACAAGGGTGATGTCAACA 60.382 41.667 0.00 0.00 34.61 3.33
194 195 4.119136 CCAAAAACAAGGGTGATGTCAAC 58.881 43.478 0.00 0.00 0.00 3.18
195 196 3.772025 ACCAAAAACAAGGGTGATGTCAA 59.228 39.130 0.00 0.00 32.60 3.18
196 197 3.370104 ACCAAAAACAAGGGTGATGTCA 58.630 40.909 0.00 0.00 32.60 3.58
197 198 4.583073 AGTACCAAAAACAAGGGTGATGTC 59.417 41.667 0.00 0.00 36.14 3.06
198 199 4.542697 AGTACCAAAAACAAGGGTGATGT 58.457 39.130 0.00 0.00 36.14 3.06
199 200 5.529581 AAGTACCAAAAACAAGGGTGATG 57.470 39.130 0.00 0.00 36.14 3.07
200 201 5.897250 AGAAAGTACCAAAAACAAGGGTGAT 59.103 36.000 0.00 0.00 36.14 3.06
201 202 5.265989 AGAAAGTACCAAAAACAAGGGTGA 58.734 37.500 0.00 0.00 36.14 4.02
202 203 5.592104 AGAAAGTACCAAAAACAAGGGTG 57.408 39.130 0.00 0.00 36.14 4.61
203 204 7.295340 AGATAGAAAGTACCAAAAACAAGGGT 58.705 34.615 0.00 0.00 38.70 4.34
204 205 7.761038 AGATAGAAAGTACCAAAAACAAGGG 57.239 36.000 0.00 0.00 0.00 3.95
205 206 9.067986 AGAAGATAGAAAGTACCAAAAACAAGG 57.932 33.333 0.00 0.00 0.00 3.61
211 212 9.720769 CACCTTAGAAGATAGAAAGTACCAAAA 57.279 33.333 0.00 0.00 0.00 2.44
212 213 9.096823 TCACCTTAGAAGATAGAAAGTACCAAA 57.903 33.333 0.00 0.00 0.00 3.28
213 214 8.660295 TCACCTTAGAAGATAGAAAGTACCAA 57.340 34.615 0.00 0.00 0.00 3.67
214 215 8.660295 TTCACCTTAGAAGATAGAAAGTACCA 57.340 34.615 0.00 0.00 0.00 3.25
215 216 9.752961 GATTCACCTTAGAAGATAGAAAGTACC 57.247 37.037 0.00 0.00 0.00 3.34
222 223 9.587772 CGAAAAAGATTCACCTTAGAAGATAGA 57.412 33.333 0.00 0.00 0.00 1.98
223 224 9.587772 TCGAAAAAGATTCACCTTAGAAGATAG 57.412 33.333 0.00 0.00 0.00 2.08
225 226 9.454859 AATCGAAAAAGATTCACCTTAGAAGAT 57.545 29.630 0.00 0.00 36.17 2.40
226 227 8.848474 AATCGAAAAAGATTCACCTTAGAAGA 57.152 30.769 0.00 0.00 36.17 2.87
229 230 9.720769 AGTAAATCGAAAAAGATTCACCTTAGA 57.279 29.630 0.00 0.00 39.69 2.10
232 233 9.067986 AGAAGTAAATCGAAAAAGATTCACCTT 57.932 29.630 0.00 0.00 39.69 3.50
233 234 8.622948 AGAAGTAAATCGAAAAAGATTCACCT 57.377 30.769 0.00 0.00 39.69 4.00
236 237 9.988350 GCATAGAAGTAAATCGAAAAAGATTCA 57.012 29.630 0.00 0.00 39.69 2.57
237 238 9.988350 TGCATAGAAGTAAATCGAAAAAGATTC 57.012 29.630 0.00 0.00 39.69 2.52
240 241 9.825972 CTTTGCATAGAAGTAAATCGAAAAAGA 57.174 29.630 0.00 0.00 0.00 2.52
241 242 9.825972 TCTTTGCATAGAAGTAAATCGAAAAAG 57.174 29.630 4.20 0.00 0.00 2.27
242 243 9.607285 GTCTTTGCATAGAAGTAAATCGAAAAA 57.393 29.630 8.54 0.00 0.00 1.94
243 244 8.999431 AGTCTTTGCATAGAAGTAAATCGAAAA 58.001 29.630 8.54 0.00 0.00 2.29
244 245 8.547967 AGTCTTTGCATAGAAGTAAATCGAAA 57.452 30.769 8.54 0.00 0.00 3.46
245 246 8.547967 AAGTCTTTGCATAGAAGTAAATCGAA 57.452 30.769 8.54 0.00 0.00 3.71
246 247 7.277981 GGAAGTCTTTGCATAGAAGTAAATCGA 59.722 37.037 8.54 0.00 0.00 3.59
247 248 7.402640 GGAAGTCTTTGCATAGAAGTAAATCG 58.597 38.462 8.54 0.00 0.00 3.34
248 249 7.554476 AGGGAAGTCTTTGCATAGAAGTAAATC 59.446 37.037 8.54 2.08 0.00 2.17
249 250 7.406104 AGGGAAGTCTTTGCATAGAAGTAAAT 58.594 34.615 8.54 0.00 0.00 1.40
250 251 6.779860 AGGGAAGTCTTTGCATAGAAGTAAA 58.220 36.000 8.54 0.00 0.00 2.01
251 252 6.374417 AGGGAAGTCTTTGCATAGAAGTAA 57.626 37.500 8.54 0.00 0.00 2.24
252 253 6.374417 AAGGGAAGTCTTTGCATAGAAGTA 57.626 37.500 8.54 0.00 0.00 2.24
253 254 4.917906 AGGGAAGTCTTTGCATAGAAGT 57.082 40.909 8.54 0.00 0.00 3.01
254 255 5.163814 CGAAAGGGAAGTCTTTGCATAGAAG 60.164 44.000 8.54 0.00 37.13 2.85
255 256 4.695455 CGAAAGGGAAGTCTTTGCATAGAA 59.305 41.667 8.54 0.00 37.13 2.10
256 257 4.253685 CGAAAGGGAAGTCTTTGCATAGA 58.746 43.478 2.39 2.39 37.13 1.98
257 258 4.003648 ACGAAAGGGAAGTCTTTGCATAG 58.996 43.478 0.00 0.00 37.13 2.23
258 259 4.015872 ACGAAAGGGAAGTCTTTGCATA 57.984 40.909 0.00 0.00 37.13 3.14
259 260 2.863809 ACGAAAGGGAAGTCTTTGCAT 58.136 42.857 0.00 0.00 37.13 3.96
260 261 2.341846 ACGAAAGGGAAGTCTTTGCA 57.658 45.000 0.00 0.00 37.13 4.08
261 262 5.372547 AATTACGAAAGGGAAGTCTTTGC 57.627 39.130 0.00 0.00 37.13 3.68
263 264 8.890718 GCTTATAATTACGAAAGGGAAGTCTTT 58.109 33.333 0.00 0.00 39.41 2.52
264 265 8.265764 AGCTTATAATTACGAAAGGGAAGTCTT 58.734 33.333 0.00 0.00 0.00 3.01
265 266 7.793036 AGCTTATAATTACGAAAGGGAAGTCT 58.207 34.615 0.00 0.00 0.00 3.24
266 267 8.434733 AAGCTTATAATTACGAAAGGGAAGTC 57.565 34.615 0.00 0.00 0.00 3.01
285 286 9.895138 AAAATAGGAAAACCGTAGATAAGCTTA 57.105 29.630 8.99 8.99 0.00 3.09
286 287 8.803397 AAAATAGGAAAACCGTAGATAAGCTT 57.197 30.769 3.48 3.48 0.00 3.74
287 288 8.044908 TGAAAATAGGAAAACCGTAGATAAGCT 58.955 33.333 0.00 0.00 0.00 3.74
288 289 8.205131 TGAAAATAGGAAAACCGTAGATAAGC 57.795 34.615 0.00 0.00 0.00 3.09
289 290 9.983804 GTTGAAAATAGGAAAACCGTAGATAAG 57.016 33.333 0.00 0.00 0.00 1.73
290 291 9.729281 AGTTGAAAATAGGAAAACCGTAGATAA 57.271 29.630 0.00 0.00 0.00 1.75
292 293 9.729281 TTAGTTGAAAATAGGAAAACCGTAGAT 57.271 29.630 0.00 0.00 0.00 1.98
293 294 9.558396 TTTAGTTGAAAATAGGAAAACCGTAGA 57.442 29.630 0.00 0.00 0.00 2.59
328 329 9.405083 CGTCAGTACGTCATGTTTTATTTTATC 57.595 33.333 0.00 0.00 44.21 1.75
346 347 4.509737 GCCGCTCCCCGTCAGTAC 62.510 72.222 0.00 0.00 34.38 2.73
372 373 3.743534 TAACTGGCCATACCCGCGC 62.744 63.158 5.51 0.00 37.83 6.86
373 374 1.070786 ATAACTGGCCATACCCGCG 59.929 57.895 5.51 0.00 37.83 6.46
374 375 1.515521 GCATAACTGGCCATACCCGC 61.516 60.000 5.51 2.93 37.83 6.13
375 376 0.179032 TGCATAACTGGCCATACCCG 60.179 55.000 5.51 0.00 37.83 5.28
376 377 2.292828 ATGCATAACTGGCCATACCC 57.707 50.000 5.51 0.00 37.83 3.69
377 378 3.081804 GGTATGCATAACTGGCCATACC 58.918 50.000 14.74 9.21 37.78 2.73
378 379 3.502211 GTGGTATGCATAACTGGCCATAC 59.498 47.826 21.96 6.83 0.00 2.39
379 380 3.137360 TGTGGTATGCATAACTGGCCATA 59.863 43.478 21.96 13.24 0.00 2.74
380 381 2.091939 TGTGGTATGCATAACTGGCCAT 60.092 45.455 21.96 0.00 0.00 4.40
381 382 1.283321 TGTGGTATGCATAACTGGCCA 59.717 47.619 21.96 14.92 0.00 5.36
382 383 1.949525 CTGTGGTATGCATAACTGGCC 59.050 52.381 21.96 12.55 0.00 5.36
383 384 2.874701 CTCTGTGGTATGCATAACTGGC 59.125 50.000 21.96 12.61 0.00 4.85
384 385 2.874701 GCTCTGTGGTATGCATAACTGG 59.125 50.000 21.96 11.90 0.00 4.00
385 386 2.541346 CGCTCTGTGGTATGCATAACTG 59.459 50.000 21.96 14.40 0.00 3.16
386 387 2.430694 TCGCTCTGTGGTATGCATAACT 59.569 45.455 21.96 0.00 0.00 2.24
387 388 2.540101 GTCGCTCTGTGGTATGCATAAC 59.460 50.000 15.14 15.14 0.00 1.89
405 406 4.124851 ACTAAATAAGCCACTCCAGTCG 57.875 45.455 0.00 0.00 0.00 4.18
408 409 6.038714 GGAATCAACTAAATAAGCCACTCCAG 59.961 42.308 0.00 0.00 0.00 3.86
438 439 1.330655 TTCCCCAAAAGCCAAACGCA 61.331 50.000 0.00 0.00 41.38 5.24
454 455 2.556287 CTTGCCTTGCGACGTTCC 59.444 61.111 0.00 0.00 0.00 3.62
499 500 1.136085 TGCGCATAAAACAAGAGACGC 60.136 47.619 5.66 0.00 44.91 5.19
503 504 4.681025 ACAAACATGCGCATAAAACAAGAG 59.319 37.500 24.84 9.86 0.00 2.85
504 505 4.615949 ACAAACATGCGCATAAAACAAGA 58.384 34.783 24.84 0.00 0.00 3.02
505 506 4.970472 ACAAACATGCGCATAAAACAAG 57.030 36.364 24.84 11.44 0.00 3.16
506 507 4.384247 GCTACAAACATGCGCATAAAACAA 59.616 37.500 24.84 6.99 0.00 2.83
507 508 3.917380 GCTACAAACATGCGCATAAAACA 59.083 39.130 24.84 6.09 0.00 2.83
508 509 4.165779 AGCTACAAACATGCGCATAAAAC 58.834 39.130 24.84 7.39 0.00 2.43
509 510 4.433186 AGCTACAAACATGCGCATAAAA 57.567 36.364 24.84 4.79 0.00 1.52
553 555 0.661483 GCAAAGCGAAACAGCACCTC 60.661 55.000 0.00 0.00 40.15 3.85
623 982 9.180678 TCGAGCATATTTTTCTTTTTGAAGTTC 57.819 29.630 0.00 0.00 35.89 3.01
626 985 9.947897 CATTCGAGCATATTTTTCTTTTTGAAG 57.052 29.630 0.00 0.00 35.89 3.02
627 986 8.924691 CCATTCGAGCATATTTTTCTTTTTGAA 58.075 29.630 0.00 0.00 0.00 2.69
629 988 8.243289 ACCATTCGAGCATATTTTTCTTTTTG 57.757 30.769 0.00 0.00 0.00 2.44
630 989 8.831715 AACCATTCGAGCATATTTTTCTTTTT 57.168 26.923 0.00 0.00 0.00 1.94
631 990 8.087750 TGAACCATTCGAGCATATTTTTCTTTT 58.912 29.630 0.00 0.00 0.00 2.27
632 991 7.601856 TGAACCATTCGAGCATATTTTTCTTT 58.398 30.769 0.00 0.00 0.00 2.52
633 992 7.156876 TGAACCATTCGAGCATATTTTTCTT 57.843 32.000 0.00 0.00 0.00 2.52
634 993 6.678900 GCTGAACCATTCGAGCATATTTTTCT 60.679 38.462 0.00 0.00 35.40 2.52
635 994 5.456822 GCTGAACCATTCGAGCATATTTTTC 59.543 40.000 0.00 0.00 35.40 2.29
636 995 5.105797 TGCTGAACCATTCGAGCATATTTTT 60.106 36.000 9.93 0.00 38.20 1.94
641 1029 2.554142 CTGCTGAACCATTCGAGCATA 58.446 47.619 12.74 0.00 40.42 3.14
647 1035 0.592637 TTGTGCTGCTGAACCATTCG 59.407 50.000 0.00 0.00 0.00 3.34
739 1221 1.401018 GGTGAATAATAATGCGGCGGC 60.401 52.381 9.78 9.68 40.52 6.53
766 1256 0.321653 CCAAGACCAAGGACGGAAGG 60.322 60.000 0.00 0.00 0.00 3.46
767 1257 0.685097 TCCAAGACCAAGGACGGAAG 59.315 55.000 0.00 0.00 0.00 3.46
768 1258 0.685097 CTCCAAGACCAAGGACGGAA 59.315 55.000 0.00 0.00 0.00 4.30
769 1259 0.178944 TCTCCAAGACCAAGGACGGA 60.179 55.000 0.00 0.00 0.00 4.69
974 1474 2.893398 GGTCGCCGGATCTGTCTT 59.107 61.111 5.05 0.00 0.00 3.01
1350 1862 3.364920 GCAGGCAAGAAAATTAAACGAGC 59.635 43.478 0.00 0.00 0.00 5.03
1352 1864 4.277174 TGAGCAGGCAAGAAAATTAAACGA 59.723 37.500 0.00 0.00 0.00 3.85
1353 1865 4.545610 TGAGCAGGCAAGAAAATTAAACG 58.454 39.130 0.00 0.00 0.00 3.60
1355 1867 4.931002 GCATGAGCAGGCAAGAAAATTAAA 59.069 37.500 0.00 0.00 41.58 1.52
1358 1870 2.565834 AGCATGAGCAGGCAAGAAAATT 59.434 40.909 9.88 0.00 45.49 1.82
1402 1915 2.749076 TCAACGATGAAAAGATGCCCAG 59.251 45.455 0.00 0.00 30.99 4.45
1497 2010 2.438392 AGAGAAAGAGAAAACCCCACGT 59.562 45.455 0.00 0.00 0.00 4.49
1505 2018 4.660771 ACCCAAGGAGAGAGAAAGAGAAAA 59.339 41.667 0.00 0.00 0.00 2.29
1507 2020 3.580458 CACCCAAGGAGAGAGAAAGAGAA 59.420 47.826 0.00 0.00 0.00 2.87
1508 2021 3.169099 CACCCAAGGAGAGAGAAAGAGA 58.831 50.000 0.00 0.00 0.00 3.10
1509 2022 2.235898 CCACCCAAGGAGAGAGAAAGAG 59.764 54.545 0.00 0.00 0.00 2.85
1510 2023 2.260822 CCACCCAAGGAGAGAGAAAGA 58.739 52.381 0.00 0.00 0.00 2.52
1511 2024 1.280421 CCCACCCAAGGAGAGAGAAAG 59.720 57.143 0.00 0.00 0.00 2.62
1512 2025 1.362224 CCCACCCAAGGAGAGAGAAA 58.638 55.000 0.00 0.00 0.00 2.52
1513 2026 0.547712 CCCCACCCAAGGAGAGAGAA 60.548 60.000 0.00 0.00 0.00 2.87
1514 2027 1.081092 CCCCACCCAAGGAGAGAGA 59.919 63.158 0.00 0.00 0.00 3.10
1515 2028 0.842467 AACCCCACCCAAGGAGAGAG 60.842 60.000 0.00 0.00 0.00 3.20
1516 2029 1.133809 CAACCCCACCCAAGGAGAGA 61.134 60.000 0.00 0.00 0.00 3.10
1517 2030 1.380302 CAACCCCACCCAAGGAGAG 59.620 63.158 0.00 0.00 0.00 3.20
1518 2031 0.104356 TACAACCCCACCCAAGGAGA 60.104 55.000 0.00 0.00 0.00 3.71
1519 2032 0.774908 TTACAACCCCACCCAAGGAG 59.225 55.000 0.00 0.00 0.00 3.69
1520 2033 0.774908 CTTACAACCCCACCCAAGGA 59.225 55.000 0.00 0.00 0.00 3.36
1521 2034 0.898326 GCTTACAACCCCACCCAAGG 60.898 60.000 0.00 0.00 0.00 3.61
1527 2040 2.332654 CGCTGGCTTACAACCCCAC 61.333 63.158 0.00 0.00 0.00 4.61
1687 2334 3.064682 TGGGATATCAAAAACATCGTGCG 59.935 43.478 4.83 0.00 0.00 5.34
1688 2335 4.630894 TGGGATATCAAAAACATCGTGC 57.369 40.909 4.83 0.00 0.00 5.34
1772 2419 2.102588 ACACTGGCCCATTCGATACTAC 59.897 50.000 0.00 0.00 0.00 2.73
1857 2524 2.755103 AGCCGACAAGGAAATGAAATCC 59.245 45.455 0.00 0.00 45.00 3.01
1880 2547 2.401766 GGTTGCAGCATGAGGACCG 61.402 63.158 2.05 0.00 39.69 4.79
1900 2567 3.252458 ACAAATTAACGCACCAGGAACTC 59.748 43.478 0.00 0.00 34.60 3.01
1909 2576 6.792726 ACAACAAACAAAACAAATTAACGCAC 59.207 30.769 0.00 0.00 0.00 5.34
1951 2624 8.682936 GAGAATAATACACATTCTCCATTGGT 57.317 34.615 12.11 0.00 46.75 3.67
1965 2638 3.119319 TGGCTGGGGTGAGAATAATACA 58.881 45.455 0.00 0.00 0.00 2.29
1980 2655 3.119029 CCATATTTCAGTTGGTTGGCTGG 60.119 47.826 0.00 0.00 33.81 4.85
1984 2659 4.006989 TCGTCCATATTTCAGTTGGTTGG 58.993 43.478 0.00 0.00 0.00 3.77
2276 3324 1.621317 TGTGCGGGTGACATAGAAGAA 59.379 47.619 0.00 0.00 0.00 2.52
2292 3340 7.559590 AGATACTATTTGGACATCTTTGTGC 57.440 36.000 0.00 0.00 43.88 4.57
2346 3394 3.436704 CACATCAGTTAAGCGACCATGTT 59.563 43.478 0.00 0.00 0.00 2.71
2347 3395 3.002791 CACATCAGTTAAGCGACCATGT 58.997 45.455 0.00 0.00 0.00 3.21
2352 3400 3.747099 AATGCACATCAGTTAAGCGAC 57.253 42.857 0.00 0.00 0.00 5.19
2597 3649 7.904558 TTCAGATCATAGGTTCTGACAGTAT 57.095 36.000 15.75 0.00 45.12 2.12
2986 4067 1.613925 ACTCGACAACAGCAAGCTAGA 59.386 47.619 0.00 0.00 0.00 2.43
3241 4325 6.876257 AGCATTACAAGGACAAAACAAACAAA 59.124 30.769 0.00 0.00 0.00 2.83
3254 4338 5.592688 GGCCATTACTAAAGCATTACAAGGA 59.407 40.000 0.00 0.00 0.00 3.36
3265 4349 5.343307 AAAAGCATGGGCCATTACTAAAG 57.657 39.130 18.46 4.69 42.56 1.85
3310 4394 4.458295 CAGCAGATCAGAAACTTGGTCAAT 59.542 41.667 0.00 0.00 30.40 2.57
3311 4395 3.817084 CAGCAGATCAGAAACTTGGTCAA 59.183 43.478 0.00 0.00 30.40 3.18
3312 4396 3.071457 TCAGCAGATCAGAAACTTGGTCA 59.929 43.478 0.00 0.00 30.40 4.02
3330 4414 5.342433 TGTTGCAGCATAATAATTGTCAGC 58.658 37.500 0.00 0.00 0.00 4.26
3363 4459 7.602517 AAATCTAGACTGTAATCACACAAGC 57.397 36.000 0.00 0.00 0.00 4.01
3580 4713 6.000840 TCAGATTATGTGTGTGCCAGTTAAA 58.999 36.000 0.00 0.00 0.00 1.52
3810 4969 7.384115 GGATTCAAAATGTTGCTATGATGATGG 59.616 37.037 0.00 0.00 34.50 3.51
3971 5224 9.773328 AAATAATCATTTCATAACTGACACACG 57.227 29.630 0.00 0.00 27.60 4.49
4000 5253 4.935808 GGTTCTCCATTTGACACGTAAGAT 59.064 41.667 0.00 0.00 43.62 2.40
4027 5280 6.524101 AACAAGTGTACACAAAATGAGGTT 57.476 33.333 27.06 14.71 0.00 3.50
4081 5334 6.014584 GGACCCTGGAAATGTAGAAAACAAAT 60.015 38.462 0.00 0.00 42.70 2.32
4082 5335 5.303333 GGACCCTGGAAATGTAGAAAACAAA 59.697 40.000 0.00 0.00 42.70 2.83
4086 5339 4.352595 TCTGGACCCTGGAAATGTAGAAAA 59.647 41.667 0.00 0.00 0.00 2.29
4090 5343 3.107601 TCTCTGGACCCTGGAAATGTAG 58.892 50.000 0.00 0.00 0.00 2.74
4091 5344 3.199442 TCTCTGGACCCTGGAAATGTA 57.801 47.619 0.00 0.00 0.00 2.29
4092 5345 2.044793 TCTCTGGACCCTGGAAATGT 57.955 50.000 0.00 0.00 0.00 2.71
4093 5346 2.158696 GGATCTCTGGACCCTGGAAATG 60.159 54.545 0.00 0.00 0.00 2.32
4094 5347 2.131023 GGATCTCTGGACCCTGGAAAT 58.869 52.381 0.00 0.00 0.00 2.17
4095 5348 1.584724 GGATCTCTGGACCCTGGAAA 58.415 55.000 0.00 0.00 0.00 3.13
4098 5351 0.106167 TACGGATCTCTGGACCCTGG 60.106 60.000 0.00 0.00 0.00 4.45
4724 5988 7.507829 AGATCTTCTCTACAGGAATTTCCATG 58.492 38.462 17.57 13.86 33.27 3.66
5099 6363 1.479323 ACCAAGATAAGCGTCGCCTTA 59.521 47.619 14.86 11.99 0.00 2.69
5261 6525 1.300233 GATCACGCCCCTCACGATC 60.300 63.158 0.00 0.00 0.00 3.69
5318 6582 2.347490 GCCTCTTCCGTGGCTTCA 59.653 61.111 0.00 0.00 44.42 3.02
5454 6718 2.192187 TTGCATTGTCGCTGCCACA 61.192 52.632 0.00 0.00 38.89 4.17
5668 6941 9.632638 AGGTAGTTCAATCATTGCATATAAGTT 57.367 29.630 0.00 0.00 0.00 2.66
5681 6961 4.406972 AGCAGCTATCAGGTAGTTCAATCA 59.593 41.667 0.00 0.00 32.72 2.57
5700 6980 4.157289 AGGCAAACATATGAAGTGAAGCAG 59.843 41.667 10.38 0.00 0.00 4.24
5714 6994 1.134848 ACGCAAACAACAGGCAAACAT 60.135 42.857 0.00 0.00 0.00 2.71
5749 7038 9.667107 CCATTTTGAGATAAACTAGTAGACCAA 57.333 33.333 3.59 0.00 0.00 3.67
5750 7039 8.822805 ACCATTTTGAGATAAACTAGTAGACCA 58.177 33.333 3.59 0.00 0.00 4.02
5751 7040 9.099454 CACCATTTTGAGATAAACTAGTAGACC 57.901 37.037 3.59 0.00 0.00 3.85
5752 7041 9.871238 TCACCATTTTGAGATAAACTAGTAGAC 57.129 33.333 3.59 0.00 0.00 2.59
5756 7045 9.793259 TTCTTCACCATTTTGAGATAAACTAGT 57.207 29.630 0.00 0.00 0.00 2.57
5781 7070 6.071952 ACGCTTTTATGTTGTCAATCATCCTT 60.072 34.615 4.55 0.00 0.00 3.36
5783 7072 5.640732 ACGCTTTTATGTTGTCAATCATCC 58.359 37.500 4.55 0.00 0.00 3.51
5791 7080 8.895932 AATTGATCTAACGCTTTTATGTTGTC 57.104 30.769 0.00 0.00 0.00 3.18
5796 7085 7.538678 GGGCATAATTGATCTAACGCTTTTATG 59.461 37.037 0.00 0.00 0.00 1.90
5808 7097 4.080129 AGAGTGTGTGGGCATAATTGATCT 60.080 41.667 0.00 0.00 0.00 2.75
5810 7099 4.240881 AGAGTGTGTGGGCATAATTGAT 57.759 40.909 0.00 0.00 0.00 2.57
5817 7114 2.592102 ATTCAAGAGTGTGTGGGCAT 57.408 45.000 0.00 0.00 0.00 4.40
5824 7121 2.880268 TGTGCCAGAATTCAAGAGTGTG 59.120 45.455 8.44 0.00 0.00 3.82
5827 7124 2.553904 CCCTGTGCCAGAATTCAAGAGT 60.554 50.000 8.44 0.00 32.44 3.24
5828 7125 2.089980 CCCTGTGCCAGAATTCAAGAG 58.910 52.381 8.44 0.00 32.44 2.85
5829 7126 1.425066 ACCCTGTGCCAGAATTCAAGA 59.575 47.619 8.44 0.00 32.44 3.02
5830 7127 1.915141 ACCCTGTGCCAGAATTCAAG 58.085 50.000 8.44 0.00 32.44 3.02
5831 7128 1.962807 CAACCCTGTGCCAGAATTCAA 59.037 47.619 8.44 0.00 32.44 2.69
5832 7129 1.144708 TCAACCCTGTGCCAGAATTCA 59.855 47.619 8.44 0.00 32.44 2.57
5833 7130 1.909700 TCAACCCTGTGCCAGAATTC 58.090 50.000 0.00 0.00 32.44 2.17
5834 7131 2.610438 ATCAACCCTGTGCCAGAATT 57.390 45.000 4.00 0.00 32.44 2.17
5835 7132 2.610438 AATCAACCCTGTGCCAGAAT 57.390 45.000 4.00 0.00 32.44 2.40
5838 7135 1.942657 CGATAATCAACCCTGTGCCAG 59.057 52.381 0.00 0.00 0.00 4.85
5839 7136 1.280710 ACGATAATCAACCCTGTGCCA 59.719 47.619 0.00 0.00 0.00 4.92
5840 7137 2.038387 ACGATAATCAACCCTGTGCC 57.962 50.000 0.00 0.00 0.00 5.01
5841 7138 2.747446 ACAACGATAATCAACCCTGTGC 59.253 45.455 0.00 0.00 0.00 4.57
5844 7141 5.416083 TCTACACAACGATAATCAACCCTG 58.584 41.667 0.00 0.00 0.00 4.45
5845 7142 5.187186 ACTCTACACAACGATAATCAACCCT 59.813 40.000 0.00 0.00 0.00 4.34
5846 7143 5.416947 ACTCTACACAACGATAATCAACCC 58.583 41.667 0.00 0.00 0.00 4.11
5847 7144 6.963049 AACTCTACACAACGATAATCAACC 57.037 37.500 0.00 0.00 0.00 3.77
5855 7154 6.537301 TCAGTTTTCAAACTCTACACAACGAT 59.463 34.615 1.76 0.00 45.65 3.73
5856 7155 5.870433 TCAGTTTTCAAACTCTACACAACGA 59.130 36.000 1.76 0.00 45.65 3.85
5860 7159 7.335673 TGTTCATCAGTTTTCAAACTCTACACA 59.664 33.333 1.76 0.79 45.65 3.72
6053 7367 2.027003 AAATCTGCTCTGCTCTGCTC 57.973 50.000 0.00 0.00 0.00 4.26
6054 7368 2.500910 ACTAAATCTGCTCTGCTCTGCT 59.499 45.455 0.00 0.00 0.00 4.24
6055 7369 2.865551 GACTAAATCTGCTCTGCTCTGC 59.134 50.000 0.00 0.00 0.00 4.26
6056 7370 3.132646 AGGACTAAATCTGCTCTGCTCTG 59.867 47.826 0.00 0.00 0.00 3.35
6057 7371 3.373830 AGGACTAAATCTGCTCTGCTCT 58.626 45.455 0.00 0.00 0.00 4.09
6110 7424 0.987294 CACCATCCTCCACTTCCACT 59.013 55.000 0.00 0.00 0.00 4.00
6111 7425 0.984230 TCACCATCCTCCACTTCCAC 59.016 55.000 0.00 0.00 0.00 4.02
6112 7426 1.561076 CATCACCATCCTCCACTTCCA 59.439 52.381 0.00 0.00 0.00 3.53
6113 7427 1.561542 ACATCACCATCCTCCACTTCC 59.438 52.381 0.00 0.00 0.00 3.46
6114 7428 2.739932 CGACATCACCATCCTCCACTTC 60.740 54.545 0.00 0.00 0.00 3.01
6115 7429 1.208052 CGACATCACCATCCTCCACTT 59.792 52.381 0.00 0.00 0.00 3.16
6305 7619 0.529378 CCACCACCTACGTCACCTAC 59.471 60.000 0.00 0.00 0.00 3.18
6419 7736 2.672996 ATTGTGCCGTGGCTGGAC 60.673 61.111 12.84 2.61 42.51 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.