Multiple sequence alignment - TraesCS3A01G188400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G188400 chr3A 100.000 7329 0 0 1 7329 227910319 227917647 0.000000e+00 13535.0
1 TraesCS3A01G188400 chr3A 85.106 94 13 1 5905 5998 14856299 14856391 2.180000e-15 95.3
2 TraesCS3A01G188400 chr3D 96.828 4256 107 17 564 4813 181117269 181113036 0.000000e+00 7086.0
3 TraesCS3A01G188400 chr3D 95.928 884 24 7 5605 6485 181111373 181110499 0.000000e+00 1423.0
4 TraesCS3A01G188400 chr3D 97.582 579 14 0 4840 5418 181113043 181112465 0.000000e+00 992.0
5 TraesCS3A01G188400 chr3D 93.312 314 14 5 1 311 181117573 181117264 2.410000e-124 457.0
6 TraesCS3A01G188400 chr3D 87.761 335 15 11 6510 6831 181110506 181110185 1.160000e-97 368.0
7 TraesCS3A01G188400 chr3D 95.455 154 7 0 5469 5622 181112315 181112162 5.680000e-61 246.0
8 TraesCS3A01G188400 chr3D 82.407 324 12 6 7051 7329 181109741 181109418 2.640000e-59 241.0
9 TraesCS3A01G188400 chr3D 81.081 111 21 0 5905 6015 181107817 181107707 1.010000e-13 89.8
10 TraesCS3A01G188400 chr3B 94.774 3444 123 27 564 3978 259461926 259458511 0.000000e+00 5310.0
11 TraesCS3A01G188400 chr3B 95.922 1030 34 6 3982 5004 259458540 259457512 0.000000e+00 1663.0
12 TraesCS3A01G188400 chr3B 90.637 1271 76 26 5469 6719 259456779 259455532 0.000000e+00 1648.0
13 TraesCS3A01G188400 chr3B 92.363 419 21 2 5001 5418 259457355 259456947 2.950000e-163 586.0
14 TraesCS3A01G188400 chr7A 75.709 1375 224 64 2025 3370 663945688 663946981 8.190000e-164 588.0
15 TraesCS3A01G188400 chr7A 84.270 89 14 0 5912 6000 705139760 705139848 3.640000e-13 87.9
16 TraesCS3A01G188400 chr1D 83.198 494 51 14 4153 4616 480402334 480402825 2.440000e-114 424.0
17 TraesCS3A01G188400 chr1D 83.883 273 33 2 5149 5412 480402829 480403099 4.390000e-62 250.0
18 TraesCS3A01G188400 chr1D 88.128 219 11 4 781 985 64127680 64127897 5.680000e-61 246.0
19 TraesCS3A01G188400 chr1D 86.758 219 14 4 781 985 418543193 418543410 5.720000e-56 230.0
20 TraesCS3A01G188400 chr1D 89.256 121 12 1 4885 5004 490476987 490477107 4.580000e-32 150.0
21 TraesCS3A01G188400 chr1D 96.296 54 2 0 110 163 64127586 64127639 1.010000e-13 89.8
22 TraesCS3A01G188400 chr7B 79.965 569 74 19 2809 3370 633690067 633689532 4.150000e-102 383.0
23 TraesCS3A01G188400 chr7B 91.321 265 20 3 304 566 598955040 598954777 6.990000e-95 359.0
24 TraesCS3A01G188400 chr7B 83.929 112 17 1 5904 6015 639086518 639086408 1.010000e-18 106.0
25 TraesCS3A01G188400 chr7B 84.270 89 14 0 5912 6000 704091961 704092049 3.640000e-13 87.9
26 TraesCS3A01G188400 chr7B 84.270 89 14 0 5912 6000 704156799 704156887 3.640000e-13 87.9
27 TraesCS3A01G188400 chr6A 92.509 267 19 1 303 568 290614255 290613989 1.490000e-101 381.0
28 TraesCS3A01G188400 chr6A 92.105 266 19 2 305 568 290705044 290704779 2.500000e-99 374.0
29 TraesCS3A01G188400 chr6D 92.164 268 20 1 303 569 265185666 265185933 1.930000e-100 377.0
30 TraesCS3A01G188400 chr6D 92.045 264 19 2 306 568 26354240 26353978 3.230000e-98 370.0
31 TraesCS3A01G188400 chr6D 91.698 265 20 2 305 568 388990620 388990883 4.180000e-97 366.0
32 TraesCS3A01G188400 chr6D 91.111 270 20 4 304 571 106456914 106457181 5.400000e-96 363.0
33 TraesCS3A01G188400 chr4D 91.418 268 23 0 307 574 495898762 495898495 1.160000e-97 368.0
34 TraesCS3A01G188400 chr4D 91.450 269 19 4 305 571 349816058 349816324 4.180000e-97 366.0
35 TraesCS3A01G188400 chr1B 87.963 216 11 5 784 985 218343530 218343744 2.640000e-59 241.0
36 TraesCS3A01G188400 chr1B 92.381 105 4 1 885 985 603633921 603634025 5.930000e-31 147.0
37 TraesCS3A01G188400 chr7D 88.235 204 9 4 795 984 112539510 112539712 5.720000e-56 230.0
38 TraesCS3A01G188400 chr7D 96.296 54 2 0 110 163 435723699 435723752 1.010000e-13 89.8
39 TraesCS3A01G188400 chrUn 94.286 105 4 1 883 985 341283476 341283580 7.610000e-35 159.0
40 TraesCS3A01G188400 chrUn 96.296 54 2 0 110 163 105816250 105816303 1.010000e-13 89.8
41 TraesCS3A01G188400 chrUn 94.444 54 3 0 110 163 106337504 106337557 4.710000e-12 84.2
42 TraesCS3A01G188400 chr2D 86.395 147 10 5 845 985 160959235 160959377 1.270000e-32 152.0
43 TraesCS3A01G188400 chr5D 96.296 54 2 0 110 163 180245191 180245244 1.010000e-13 89.8
44 TraesCS3A01G188400 chr5D 96.296 54 2 0 110 163 425287235 425287182 1.010000e-13 89.8
45 TraesCS3A01G188400 chr4B 96.296 54 2 0 110 163 157826749 157826696 1.010000e-13 89.8
46 TraesCS3A01G188400 chr4A 96.296 54 2 0 110 163 516541899 516541952 1.010000e-13 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G188400 chr3A 227910319 227917647 7328 False 13535.00 13535 100.00000 1 7329 1 chr3A.!!$F2 7328
1 TraesCS3A01G188400 chr3D 181107707 181117573 9866 True 1362.85 7086 91.29425 1 7329 8 chr3D.!!$R1 7328
2 TraesCS3A01G188400 chr3B 259455532 259461926 6394 True 2301.75 5310 93.42400 564 6719 4 chr3B.!!$R1 6155
3 TraesCS3A01G188400 chr7A 663945688 663946981 1293 False 588.00 588 75.70900 2025 3370 1 chr7A.!!$F1 1345
4 TraesCS3A01G188400 chr1D 480402334 480403099 765 False 337.00 424 83.54050 4153 5412 2 chr1D.!!$F4 1259
5 TraesCS3A01G188400 chr7B 633689532 633690067 535 True 383.00 383 79.96500 2809 3370 1 chr7B.!!$R2 561

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
357 360 0.752658 AGGTTTGGGCAAAGTCAAGC 59.247 50.0 0.00 0.00 0.00 4.01 F
1824 1857 0.475906 AGGTGGAGTTGAGCTTTGCT 59.524 50.0 0.00 0.00 43.88 3.91 F
2337 2381 0.467290 TGAAACCTGGCCCTGTTGTC 60.467 55.0 0.00 5.23 0.00 3.18 F
3043 3121 0.840288 TCTGCCAGCTGGTCCCTTTA 60.840 55.0 32.81 9.94 37.57 1.85 F
4368 4457 0.673644 ACCGTCCATTGCAGCAGTAC 60.674 55.0 0.00 0.00 0.00 2.73 F
4838 4984 0.040646 TGGAGACATACCAGGGTCGT 59.959 55.0 0.00 0.00 39.01 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2337 2381 0.109132 GGTTGGCCAGCAGAAAATCG 60.109 55.000 22.07 0.0 34.09 3.34 R
3292 3373 0.908180 GTACCCTACCAGCCACCTGT 60.908 60.000 0.00 0.0 37.38 4.00 R
3295 3376 1.905512 CAGTACCCTACCAGCCACC 59.094 63.158 0.00 0.0 0.00 4.61 R
4819 4965 0.040646 ACGACCCTGGTATGTCTCCA 59.959 55.000 0.00 0.0 0.00 3.86 R
5383 5699 0.661020 ACAGCACTACGGCAAAACAC 59.339 50.000 0.00 0.0 35.83 3.32 R
6719 8008 0.308993 GAACAATCCCATAGCAGCGC 59.691 55.000 0.00 0.0 0.00 5.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 4.422073 TTTGCCCTACCTGATGTGATAG 57.578 45.455 0.00 0.00 0.00 2.08
45 46 1.694150 TGCCCTACCTGATGTGATAGC 59.306 52.381 0.00 0.00 0.00 2.97
116 119 5.995897 ACTTTTGTACGAGCATCTTTTACCT 59.004 36.000 0.00 0.00 0.00 3.08
182 185 4.261801 AGAATGTTGTTAATCCCGTCAGG 58.738 43.478 0.00 0.00 37.24 3.86
193 196 2.450476 TCCCGTCAGGAAAGTAGTACC 58.550 52.381 0.00 0.00 43.78 3.34
194 197 2.173519 CCCGTCAGGAAAGTAGTACCA 58.826 52.381 0.00 0.00 41.02 3.25
304 307 2.967887 AGATGCTTCCTTTTGTGCCTTT 59.032 40.909 0.00 0.00 0.00 3.11
305 308 2.600470 TGCTTCCTTTTGTGCCTTTG 57.400 45.000 0.00 0.00 0.00 2.77
306 309 1.830477 TGCTTCCTTTTGTGCCTTTGT 59.170 42.857 0.00 0.00 0.00 2.83
307 310 3.027412 TGCTTCCTTTTGTGCCTTTGTA 58.973 40.909 0.00 0.00 0.00 2.41
308 311 3.181480 TGCTTCCTTTTGTGCCTTTGTAC 60.181 43.478 0.00 0.00 0.00 2.90
309 312 3.068165 GCTTCCTTTTGTGCCTTTGTACT 59.932 43.478 0.00 0.00 0.00 2.73
310 313 4.441495 GCTTCCTTTTGTGCCTTTGTACTT 60.441 41.667 0.00 0.00 0.00 2.24
311 314 4.911514 TCCTTTTGTGCCTTTGTACTTC 57.088 40.909 0.00 0.00 0.00 3.01
312 315 3.634910 TCCTTTTGTGCCTTTGTACTTCC 59.365 43.478 0.00 0.00 0.00 3.46
313 316 3.636764 CCTTTTGTGCCTTTGTACTTCCT 59.363 43.478 0.00 0.00 0.00 3.36
314 317 4.261614 CCTTTTGTGCCTTTGTACTTCCTC 60.262 45.833 0.00 0.00 0.00 3.71
315 318 3.857157 TTGTGCCTTTGTACTTCCTCT 57.143 42.857 0.00 0.00 0.00 3.69
316 319 3.126001 TGTGCCTTTGTACTTCCTCTG 57.874 47.619 0.00 0.00 0.00 3.35
317 320 2.438021 TGTGCCTTTGTACTTCCTCTGT 59.562 45.455 0.00 0.00 0.00 3.41
318 321 3.118038 TGTGCCTTTGTACTTCCTCTGTT 60.118 43.478 0.00 0.00 0.00 3.16
319 322 3.883489 GTGCCTTTGTACTTCCTCTGTTT 59.117 43.478 0.00 0.00 0.00 2.83
320 323 4.023963 GTGCCTTTGTACTTCCTCTGTTTC 60.024 45.833 0.00 0.00 0.00 2.78
321 324 4.141482 TGCCTTTGTACTTCCTCTGTTTCT 60.141 41.667 0.00 0.00 0.00 2.52
322 325 4.822350 GCCTTTGTACTTCCTCTGTTTCTT 59.178 41.667 0.00 0.00 0.00 2.52
323 326 5.299531 GCCTTTGTACTTCCTCTGTTTCTTT 59.700 40.000 0.00 0.00 0.00 2.52
324 327 6.183360 GCCTTTGTACTTCCTCTGTTTCTTTT 60.183 38.462 0.00 0.00 0.00 2.27
325 328 7.630728 GCCTTTGTACTTCCTCTGTTTCTTTTT 60.631 37.037 0.00 0.00 0.00 1.94
326 329 8.899771 CCTTTGTACTTCCTCTGTTTCTTTTTA 58.100 33.333 0.00 0.00 0.00 1.52
327 330 9.937175 CTTTGTACTTCCTCTGTTTCTTTTTAG 57.063 33.333 0.00 0.00 0.00 1.85
328 331 9.457436 TTTGTACTTCCTCTGTTTCTTTTTAGT 57.543 29.630 0.00 0.00 0.00 2.24
329 332 8.658499 TGTACTTCCTCTGTTTCTTTTTAGTC 57.342 34.615 0.00 0.00 0.00 2.59
330 333 8.483758 TGTACTTCCTCTGTTTCTTTTTAGTCT 58.516 33.333 0.00 0.00 0.00 3.24
331 334 7.793927 ACTTCCTCTGTTTCTTTTTAGTCTG 57.206 36.000 0.00 0.00 0.00 3.51
332 335 6.261158 ACTTCCTCTGTTTCTTTTTAGTCTGC 59.739 38.462 0.00 0.00 0.00 4.26
333 336 5.680619 TCCTCTGTTTCTTTTTAGTCTGCA 58.319 37.500 0.00 0.00 0.00 4.41
334 337 6.299141 TCCTCTGTTTCTTTTTAGTCTGCAT 58.701 36.000 0.00 0.00 0.00 3.96
335 338 7.450074 TCCTCTGTTTCTTTTTAGTCTGCATA 58.550 34.615 0.00 0.00 0.00 3.14
336 339 8.103305 TCCTCTGTTTCTTTTTAGTCTGCATAT 58.897 33.333 0.00 0.00 0.00 1.78
337 340 9.383519 CCTCTGTTTCTTTTTAGTCTGCATATA 57.616 33.333 0.00 0.00 0.00 0.86
340 343 9.994432 CTGTTTCTTTTTAGTCTGCATATAAGG 57.006 33.333 0.00 0.00 0.00 2.69
341 344 9.515226 TGTTTCTTTTTAGTCTGCATATAAGGT 57.485 29.630 0.00 0.00 0.00 3.50
345 348 8.956426 TCTTTTTAGTCTGCATATAAGGTTTGG 58.044 33.333 0.00 0.00 0.00 3.28
346 349 7.639113 TTTTAGTCTGCATATAAGGTTTGGG 57.361 36.000 0.00 0.00 0.00 4.12
347 350 3.555966 AGTCTGCATATAAGGTTTGGGC 58.444 45.455 0.00 0.00 0.00 5.36
348 351 3.053693 AGTCTGCATATAAGGTTTGGGCA 60.054 43.478 0.00 0.00 0.00 5.36
349 352 3.699038 GTCTGCATATAAGGTTTGGGCAA 59.301 43.478 0.00 0.00 0.00 4.52
350 353 4.159506 GTCTGCATATAAGGTTTGGGCAAA 59.840 41.667 0.00 0.00 0.00 3.68
351 354 4.402155 TCTGCATATAAGGTTTGGGCAAAG 59.598 41.667 0.00 0.00 0.00 2.77
352 355 4.093011 TGCATATAAGGTTTGGGCAAAGT 58.907 39.130 0.00 0.00 0.00 2.66
353 356 4.159506 TGCATATAAGGTTTGGGCAAAGTC 59.840 41.667 0.00 0.00 0.00 3.01
354 357 4.159506 GCATATAAGGTTTGGGCAAAGTCA 59.840 41.667 0.00 0.00 0.00 3.41
355 358 5.337169 GCATATAAGGTTTGGGCAAAGTCAA 60.337 40.000 0.00 0.00 0.00 3.18
356 359 4.871933 ATAAGGTTTGGGCAAAGTCAAG 57.128 40.909 0.00 0.00 0.00 3.02
357 360 0.752658 AGGTTTGGGCAAAGTCAAGC 59.247 50.000 0.00 0.00 0.00 4.01
358 361 0.752658 GGTTTGGGCAAAGTCAAGCT 59.247 50.000 0.00 0.00 0.00 3.74
359 362 1.138859 GGTTTGGGCAAAGTCAAGCTT 59.861 47.619 0.00 0.00 39.52 3.74
376 379 9.516314 AGTCAAGCTTTGTAAAATTTGACTAAC 57.484 29.630 21.77 2.05 42.92 2.34
377 380 9.516314 GTCAAGCTTTGTAAAATTTGACTAACT 57.484 29.630 17.44 3.97 37.80 2.24
433 436 9.749340 ATGAAATCAATAATATCAGATGCCTCA 57.251 29.630 0.00 0.00 0.00 3.86
434 437 9.749340 TGAAATCAATAATATCAGATGCCTCAT 57.251 29.630 0.00 0.00 0.00 2.90
436 439 9.749340 AAATCAATAATATCAGATGCCTCATGA 57.251 29.630 0.00 0.00 0.00 3.07
437 440 9.749340 AATCAATAATATCAGATGCCTCATGAA 57.251 29.630 0.00 0.00 0.00 2.57
438 441 9.749340 ATCAATAATATCAGATGCCTCATGAAA 57.251 29.630 0.00 0.00 0.00 2.69
439 442 9.749340 TCAATAATATCAGATGCCTCATGAAAT 57.251 29.630 0.00 0.00 0.00 2.17
441 444 9.529823 AATAATATCAGATGCCTCATGAAATGT 57.470 29.630 0.00 0.00 46.80 2.71
444 447 9.529823 AATATCAGATGCCTCATGAAATGTATT 57.470 29.630 0.00 0.00 46.80 1.89
445 448 7.834881 ATCAGATGCCTCATGAAATGTATTT 57.165 32.000 0.00 0.00 46.80 1.40
446 449 7.649533 TCAGATGCCTCATGAAATGTATTTT 57.350 32.000 0.00 0.00 46.80 1.82
447 450 7.709947 TCAGATGCCTCATGAAATGTATTTTC 58.290 34.615 0.00 0.00 46.80 2.29
558 561 9.657728 TTTATACTTTGGGTAAAAAGAAAGGGA 57.342 29.630 3.82 0.00 39.12 4.20
559 562 7.776618 ATACTTTGGGTAAAAAGAAAGGGAG 57.223 36.000 3.82 0.00 39.12 4.30
560 563 4.899457 ACTTTGGGTAAAAAGAAAGGGAGG 59.101 41.667 3.82 0.00 39.12 4.30
561 564 3.536075 TGGGTAAAAAGAAAGGGAGGG 57.464 47.619 0.00 0.00 0.00 4.30
562 565 3.065175 TGGGTAAAAAGAAAGGGAGGGA 58.935 45.455 0.00 0.00 0.00 4.20
566 569 5.251764 GGTAAAAAGAAAGGGAGGGAGTAC 58.748 45.833 0.00 0.00 0.00 2.73
576 579 6.713731 AAGGGAGGGAGTACTTTGAATTTA 57.286 37.500 0.00 0.00 0.00 1.40
577 580 6.910259 AGGGAGGGAGTACTTTGAATTTAT 57.090 37.500 0.00 0.00 0.00 1.40
578 581 6.663734 AGGGAGGGAGTACTTTGAATTTATG 58.336 40.000 0.00 0.00 0.00 1.90
822 828 5.994668 TGAAAAATGGTTTCTTTATGTGCCC 59.005 36.000 0.99 0.00 0.00 5.36
847 856 8.915654 CCTTTCATACTTGATTTGTTAAGTTGC 58.084 33.333 0.00 0.00 38.11 4.17
909 931 9.048446 GTGTTGGTCTGTTAGATAACTTGTTTA 57.952 33.333 4.50 0.00 37.12 2.01
1014 1038 0.888619 GTCAGATGGAGTCACACGGA 59.111 55.000 0.00 0.00 0.00 4.69
1017 1041 1.133982 CAGATGGAGTCACACGGAGAG 59.866 57.143 0.00 0.00 0.00 3.20
1473 1497 3.031013 TGCTCAGACTTATCCATCGGAA 58.969 45.455 0.00 0.00 34.34 4.30
1572 1596 5.652014 TGAGTTTGTTGTGGTTCTTGAAGAT 59.348 36.000 0.00 0.00 0.00 2.40
1791 1824 5.441718 AGAGAGTGAAAAGGCCATATCAA 57.558 39.130 5.01 0.00 0.00 2.57
1824 1857 0.475906 AGGTGGAGTTGAGCTTTGCT 59.524 50.000 0.00 0.00 43.88 3.91
2022 2055 9.479549 AGTGTTGATATTCCATGGTAAATCTTT 57.520 29.630 12.58 0.00 0.00 2.52
2259 2303 7.090173 TCTTGTGACAGCATTTTAAATTAGGC 58.910 34.615 0.00 0.00 0.00 3.93
2337 2381 0.467290 TGAAACCTGGCCCTGTTGTC 60.467 55.000 0.00 5.23 0.00 3.18
2419 2463 7.391833 AGGTAAGATTTCTCCTTAACTTGCTTG 59.608 37.037 0.00 0.00 40.22 4.01
2610 2656 8.126871 TGAACAAATGTAAGTGAGTATATCGC 57.873 34.615 0.00 0.00 38.82 4.58
2622 2668 7.217200 AGTGAGTATATCGCCATTTGTTGTAT 58.783 34.615 0.00 0.00 39.39 2.29
2623 2669 7.171508 AGTGAGTATATCGCCATTTGTTGTATG 59.828 37.037 0.00 0.00 39.39 2.39
2627 2673 8.988934 AGTATATCGCCATTTGTTGTATGTAAG 58.011 33.333 0.00 0.00 0.00 2.34
2668 2715 1.135199 GGACTTGTTGCATGGCATCTG 60.135 52.381 0.00 0.00 38.76 2.90
3043 3121 0.840288 TCTGCCAGCTGGTCCCTTTA 60.840 55.000 32.81 9.94 37.57 1.85
3149 3227 1.511850 TTTGTCTGATGTGAGTGGCG 58.488 50.000 0.00 0.00 0.00 5.69
3254 3335 4.744867 GCAGCTATGATACAGAACCCATGT 60.745 45.833 0.00 0.00 34.62 3.21
3283 3364 4.319333 GCATGTGGAATTTCGATAGCTCAG 60.319 45.833 0.00 0.00 0.00 3.35
3394 3475 4.098349 TGCTTGTGAAATCCTTATGCATCC 59.902 41.667 0.19 0.00 0.00 3.51
3506 3587 4.675510 CTTGTTTTGACTGCATTCTGTGT 58.324 39.130 5.59 0.00 0.00 3.72
3519 3600 8.531982 ACTGCATTCTGTGTCTACTCTTTTATA 58.468 33.333 0.00 0.00 0.00 0.98
3550 3631 9.846248 ATGTTTTCAATCATAACTTTGCTAGTC 57.154 29.630 0.00 0.00 35.54 2.59
3598 3679 2.152729 TGTGGTGGACAGATGGGCA 61.153 57.895 0.00 0.00 0.00 5.36
3865 3946 2.317149 CTAAGCTTCCTGGGGCTCCG 62.317 65.000 0.00 0.00 37.87 4.63
3939 4020 8.303876 TGGTTGGTTCTAGAAATTCTTAATTGC 58.696 33.333 6.78 0.00 0.00 3.56
3975 4056 9.698309 ATAAGTTTAGGACAATCATCTGTATCG 57.302 33.333 0.00 0.00 0.00 2.92
4161 4242 2.976494 AAGTTTGTGCCTCCCCCACG 62.976 60.000 0.00 0.00 36.01 4.94
4165 4246 4.083862 GTGCCTCCCCCACGTCTC 62.084 72.222 0.00 0.00 0.00 3.36
4247 4334 3.327757 AGCTTGGTGGAATGAACTCACTA 59.672 43.478 0.00 0.00 0.00 2.74
4368 4457 0.673644 ACCGTCCATTGCAGCAGTAC 60.674 55.000 0.00 0.00 0.00 2.73
4392 4485 8.888579 ACGCTACTAAATTTACTCTGCATTAT 57.111 30.769 0.00 0.00 0.00 1.28
4547 4659 1.905922 GCTCGCAGTCACCAAAGCTC 61.906 60.000 0.00 0.00 0.00 4.09
4616 4728 5.712917 TGGCCTTGTTCGGTAAGATATTTTT 59.287 36.000 3.32 0.00 0.00 1.94
4648 4760 4.450757 TGTTCAGTCGTCCATACAAATGTG 59.549 41.667 0.00 0.00 0.00 3.21
4671 4783 4.333926 GCTATGGTGGTTCTCTTGATGTTC 59.666 45.833 0.00 0.00 0.00 3.18
4693 4805 3.343617 TCTTTTCCTGTTGCTATTCCGG 58.656 45.455 0.00 0.00 0.00 5.14
4779 4891 7.713942 CAGATCATCATCTTCAGGTTTGTCATA 59.286 37.037 0.00 0.00 37.25 2.15
4813 4959 3.815401 ACTACTTGCAAATGTCAGTGGTC 59.185 43.478 0.00 0.00 0.00 4.02
4814 4960 2.653726 ACTTGCAAATGTCAGTGGTCA 58.346 42.857 0.00 0.00 0.00 4.02
4815 4961 2.620115 ACTTGCAAATGTCAGTGGTCAG 59.380 45.455 0.00 0.00 0.00 3.51
4816 4962 2.346766 TGCAAATGTCAGTGGTCAGT 57.653 45.000 0.00 0.00 0.00 3.41
4817 4963 3.483808 TGCAAATGTCAGTGGTCAGTA 57.516 42.857 0.00 0.00 0.00 2.74
4818 4964 4.019792 TGCAAATGTCAGTGGTCAGTAT 57.980 40.909 0.00 0.00 0.00 2.12
4819 4965 4.397420 TGCAAATGTCAGTGGTCAGTATT 58.603 39.130 0.00 0.00 0.00 1.89
4820 4966 4.216042 TGCAAATGTCAGTGGTCAGTATTG 59.784 41.667 0.00 0.48 0.00 1.90
4821 4967 4.379813 GCAAATGTCAGTGGTCAGTATTGG 60.380 45.833 0.00 0.00 0.00 3.16
4822 4968 4.908601 AATGTCAGTGGTCAGTATTGGA 57.091 40.909 0.00 0.00 0.00 3.53
4823 4969 3.961480 TGTCAGTGGTCAGTATTGGAG 57.039 47.619 0.00 0.00 0.00 3.86
4824 4970 3.506398 TGTCAGTGGTCAGTATTGGAGA 58.494 45.455 0.00 0.00 0.00 3.71
4825 4971 3.258372 TGTCAGTGGTCAGTATTGGAGAC 59.742 47.826 0.00 0.00 0.00 3.36
4826 4972 3.258372 GTCAGTGGTCAGTATTGGAGACA 59.742 47.826 0.00 0.00 39.83 3.41
4827 4973 4.081420 GTCAGTGGTCAGTATTGGAGACAT 60.081 45.833 0.00 0.00 42.32 3.06
4828 4974 5.127194 GTCAGTGGTCAGTATTGGAGACATA 59.873 44.000 0.00 0.00 42.32 2.29
4829 4975 5.127194 TCAGTGGTCAGTATTGGAGACATAC 59.873 44.000 0.00 0.00 42.32 2.39
4830 4976 4.406003 AGTGGTCAGTATTGGAGACATACC 59.594 45.833 0.00 0.00 42.32 2.73
4831 4977 4.161565 GTGGTCAGTATTGGAGACATACCA 59.838 45.833 0.00 0.00 42.32 3.25
4832 4978 4.405680 TGGTCAGTATTGGAGACATACCAG 59.594 45.833 0.00 0.00 42.32 4.00
4833 4979 4.202264 GGTCAGTATTGGAGACATACCAGG 60.202 50.000 0.00 0.00 42.32 4.45
4834 4980 3.967326 TCAGTATTGGAGACATACCAGGG 59.033 47.826 0.00 0.00 42.32 4.45
4835 4981 3.711704 CAGTATTGGAGACATACCAGGGT 59.288 47.826 0.00 0.00 42.32 4.34
4836 4982 3.967987 AGTATTGGAGACATACCAGGGTC 59.032 47.826 0.00 0.00 42.32 4.46
4837 4983 1.191535 TTGGAGACATACCAGGGTCG 58.808 55.000 0.00 0.00 42.32 4.79
4838 4984 0.040646 TGGAGACATACCAGGGTCGT 59.959 55.000 0.00 0.00 39.01 4.34
4839 4985 1.192428 GGAGACATACCAGGGTCGTT 58.808 55.000 0.00 0.00 39.01 3.85
4840 4986 1.136500 GGAGACATACCAGGGTCGTTC 59.864 57.143 0.00 0.00 39.01 3.95
4841 4987 1.822990 GAGACATACCAGGGTCGTTCA 59.177 52.381 0.00 0.00 39.01 3.18
4842 4988 1.825474 AGACATACCAGGGTCGTTCAG 59.175 52.381 0.00 0.00 39.01 3.02
4843 4989 1.549170 GACATACCAGGGTCGTTCAGT 59.451 52.381 0.00 0.00 0.00 3.41
4844 4990 1.975680 ACATACCAGGGTCGTTCAGTT 59.024 47.619 0.00 0.00 0.00 3.16
4845 4991 2.289444 ACATACCAGGGTCGTTCAGTTG 60.289 50.000 0.00 0.00 0.00 3.16
4846 4992 1.416243 TACCAGGGTCGTTCAGTTGT 58.584 50.000 0.00 0.00 0.00 3.32
5053 5359 4.739716 GCACAACTGACTTGGTGTTTATTG 59.260 41.667 0.00 0.00 33.66 1.90
5119 5425 0.593128 AGTTCACGCTGATTGTTGCC 59.407 50.000 0.00 0.00 0.00 4.52
5140 5446 3.133721 CCCAGAAAAATCACCACACCAAA 59.866 43.478 0.00 0.00 0.00 3.28
5186 5492 4.726825 ACAATGTCCCTCCAGGTAACATAT 59.273 41.667 9.98 2.26 38.16 1.78
5359 5675 7.712639 GCTGGAATGATTGTAAGTATTCTCTCA 59.287 37.037 0.00 0.00 31.83 3.27
5383 5699 6.474427 CAGGTGCATCATATTTGCTTGTTAAG 59.526 38.462 0.00 0.00 40.77 1.85
5393 5709 2.803451 TGCTTGTTAAGTGTTTTGCCG 58.197 42.857 0.00 0.00 0.00 5.69
5412 5728 3.386486 CCGTAGTGCTGTTCTGTTTGTA 58.614 45.455 0.00 0.00 0.00 2.41
5418 5734 8.865978 CGTAGTGCTGTTCTGTTTGTAATATAA 58.134 33.333 0.00 0.00 0.00 0.98
5449 5810 4.265073 AGTTTTGATCCATCTGTAGCCAC 58.735 43.478 0.00 0.00 0.00 5.01
5486 5922 3.878778 CCCTAGTTCCCTTGATCAGTTG 58.121 50.000 0.00 0.00 0.00 3.16
5504 5940 2.832129 GTTGATACTGACCCTCCTGTCA 59.168 50.000 0.00 0.00 42.75 3.58
5577 6013 6.998074 GGAACCATCACTGATTTACCATGATA 59.002 38.462 0.00 0.00 0.00 2.15
5646 6886 6.343716 TCACTTTGTGGTTGATGCATTTAT 57.656 33.333 0.00 0.00 33.87 1.40
5647 6887 7.459795 TCACTTTGTGGTTGATGCATTTATA 57.540 32.000 0.00 0.00 33.87 0.98
5648 6888 8.065473 TCACTTTGTGGTTGATGCATTTATAT 57.935 30.769 0.00 0.00 33.87 0.86
5649 6889 9.183368 TCACTTTGTGGTTGATGCATTTATATA 57.817 29.630 0.00 0.00 33.87 0.86
5695 6935 7.063898 CAGTATGATGTAAAACTCTGGTCAGTG 59.936 40.741 0.00 0.00 39.69 3.66
5854 7099 7.651704 AGTTGTATTTTTGTTGCTTGTACCATC 59.348 33.333 0.00 0.00 0.00 3.51
5860 7105 1.463444 GTTGCTTGTACCATCGTGACC 59.537 52.381 0.00 0.00 0.00 4.02
5876 7121 3.181491 CGTGACCATTTCCAGTTTGTTGT 60.181 43.478 0.00 0.00 0.00 3.32
5881 7129 3.181491 CCATTTCCAGTTTGTTGTCGTGT 60.181 43.478 0.00 0.00 0.00 4.49
5882 7130 4.035792 CCATTTCCAGTTTGTTGTCGTGTA 59.964 41.667 0.00 0.00 0.00 2.90
5883 7131 4.868450 TTTCCAGTTTGTTGTCGTGTAG 57.132 40.909 0.00 0.00 0.00 2.74
5884 7132 3.804786 TCCAGTTTGTTGTCGTGTAGA 57.195 42.857 0.00 0.00 0.00 2.59
5970 7218 4.520179 TGCATGATGAGATACACTTTGCT 58.480 39.130 0.00 0.00 0.00 3.91
6142 7392 2.758736 TTGCAACCTTGTTGTGCTTT 57.241 40.000 8.58 0.00 0.00 3.51
6220 7470 8.944029 CAGTTCATAAAGTTTGATGAGATGTCT 58.056 33.333 0.00 0.00 33.73 3.41
6481 7768 2.633860 CACTTGGTGCCTCAGAACC 58.366 57.895 0.00 0.00 36.96 3.62
6482 7769 0.109342 CACTTGGTGCCTCAGAACCT 59.891 55.000 0.00 0.00 37.36 3.50
6483 7770 0.846693 ACTTGGTGCCTCAGAACCTT 59.153 50.000 0.00 0.00 37.36 3.50
6484 7771 1.215423 ACTTGGTGCCTCAGAACCTTT 59.785 47.619 0.00 0.00 37.36 3.11
6485 7772 1.610522 CTTGGTGCCTCAGAACCTTTG 59.389 52.381 0.00 0.00 37.36 2.77
6486 7773 0.843309 TGGTGCCTCAGAACCTTTGA 59.157 50.000 0.00 0.00 37.36 2.69
6487 7774 1.214175 TGGTGCCTCAGAACCTTTGAA 59.786 47.619 0.00 0.00 37.36 2.69
6488 7775 2.158475 TGGTGCCTCAGAACCTTTGAAT 60.158 45.455 0.00 0.00 37.36 2.57
6489 7776 2.489722 GGTGCCTCAGAACCTTTGAATC 59.510 50.000 0.00 0.00 33.40 2.52
6490 7777 2.489722 GTGCCTCAGAACCTTTGAATCC 59.510 50.000 0.00 0.00 0.00 3.01
6491 7778 2.376518 TGCCTCAGAACCTTTGAATCCT 59.623 45.455 0.00 0.00 0.00 3.24
6492 7779 2.751806 GCCTCAGAACCTTTGAATCCTG 59.248 50.000 0.00 0.00 0.00 3.86
6493 7780 3.812167 GCCTCAGAACCTTTGAATCCTGT 60.812 47.826 0.00 0.00 0.00 4.00
6494 7781 4.006319 CCTCAGAACCTTTGAATCCTGTC 58.994 47.826 0.00 0.00 0.00 3.51
6495 7782 4.505566 CCTCAGAACCTTTGAATCCTGTCA 60.506 45.833 0.00 0.00 0.00 3.58
6496 7783 4.645535 TCAGAACCTTTGAATCCTGTCAG 58.354 43.478 0.00 0.00 0.00 3.51
6497 7784 3.755378 CAGAACCTTTGAATCCTGTCAGG 59.245 47.826 13.21 13.21 36.46 3.86
6498 7785 2.887151 ACCTTTGAATCCTGTCAGGG 57.113 50.000 19.11 2.62 35.59 4.45
6499 7786 2.065799 ACCTTTGAATCCTGTCAGGGT 58.934 47.619 19.11 9.30 35.59 4.34
6500 7787 2.224867 ACCTTTGAATCCTGTCAGGGTG 60.225 50.000 19.11 1.14 35.52 4.61
6501 7788 1.815003 CTTTGAATCCTGTCAGGGTGC 59.185 52.381 19.11 11.45 35.59 5.01
6502 7789 1.067295 TTGAATCCTGTCAGGGTGCT 58.933 50.000 19.11 0.00 35.59 4.40
6503 7790 0.325933 TGAATCCTGTCAGGGTGCTG 59.674 55.000 19.11 0.00 35.59 4.41
6504 7791 1.001641 AATCCTGTCAGGGTGCTGC 60.002 57.895 19.11 0.00 35.59 5.25
6505 7792 1.782201 AATCCTGTCAGGGTGCTGCA 61.782 55.000 19.11 0.00 35.59 4.41
6506 7793 2.194388 ATCCTGTCAGGGTGCTGCAG 62.194 60.000 19.11 10.11 35.59 4.41
6507 7794 2.429058 CTGTCAGGGTGCTGCAGT 59.571 61.111 16.64 0.00 0.00 4.40
6508 7795 1.228063 CTGTCAGGGTGCTGCAGTT 60.228 57.895 16.64 0.00 0.00 3.16
6509 7796 1.512996 CTGTCAGGGTGCTGCAGTTG 61.513 60.000 16.64 6.76 0.00 3.16
6538 7825 9.326413 CCTTTACTATCGAACCATCTAATTTGT 57.674 33.333 0.00 0.00 0.00 2.83
6653 7941 7.066142 AGTGGGTAGGATGAGCTAGATATATG 58.934 42.308 0.00 0.00 0.00 1.78
6658 7946 6.482898 AGGATGAGCTAGATATATGCCTTG 57.517 41.667 0.00 0.00 0.00 3.61
6661 7949 7.621285 AGGATGAGCTAGATATATGCCTTGTTA 59.379 37.037 0.00 0.00 0.00 2.41
6662 7950 8.260818 GGATGAGCTAGATATATGCCTTGTTAA 58.739 37.037 0.00 0.00 0.00 2.01
6680 7969 5.189928 TGTTAAGCCTTCTGTTTTCTGACA 58.810 37.500 0.00 0.00 0.00 3.58
6720 8009 2.592308 CCTACTTGGGAGGCTGGC 59.408 66.667 0.00 0.00 0.00 4.85
6747 8036 0.623723 TGGGATTGTTCTAGGTGGCC 59.376 55.000 0.00 0.00 0.00 5.36
6748 8037 0.623723 GGGATTGTTCTAGGTGGCCA 59.376 55.000 0.00 0.00 0.00 5.36
6751 8040 2.504175 GGATTGTTCTAGGTGGCCAGTA 59.496 50.000 5.11 0.00 0.00 2.74
6755 8044 1.900486 GTTCTAGGTGGCCAGTACAGT 59.100 52.381 5.11 0.00 0.00 3.55
6756 8045 2.302157 GTTCTAGGTGGCCAGTACAGTT 59.698 50.000 5.11 0.00 0.00 3.16
6757 8046 3.461378 TCTAGGTGGCCAGTACAGTTA 57.539 47.619 5.11 0.00 0.00 2.24
6758 8047 3.362706 TCTAGGTGGCCAGTACAGTTAG 58.637 50.000 5.11 0.71 0.00 2.34
6759 8048 1.276622 AGGTGGCCAGTACAGTTAGG 58.723 55.000 5.11 0.00 0.00 2.69
6798 8099 0.322648 GGCCAGCCTTTTCTTGCATT 59.677 50.000 0.00 0.00 0.00 3.56
6808 8109 5.358922 CCTTTTCTTGCATTTCACTTGGAA 58.641 37.500 0.00 0.00 0.00 3.53
6831 8132 3.917985 AGTTCGTTTGCACTTTGTTTGTC 59.082 39.130 0.00 0.00 0.00 3.18
6833 8134 4.167554 TCGTTTGCACTTTGTTTGTCTT 57.832 36.364 0.00 0.00 0.00 3.01
6835 8136 3.303229 CGTTTGCACTTTGTTTGTCTTCC 59.697 43.478 0.00 0.00 0.00 3.46
6836 8137 4.241681 GTTTGCACTTTGTTTGTCTTCCA 58.758 39.130 0.00 0.00 0.00 3.53
6838 8139 4.527509 TGCACTTTGTTTGTCTTCCAAA 57.472 36.364 0.00 0.00 40.71 3.28
6839 8140 5.083533 TGCACTTTGTTTGTCTTCCAAAT 57.916 34.783 0.00 0.00 44.50 2.32
6840 8141 5.486526 TGCACTTTGTTTGTCTTCCAAATT 58.513 33.333 0.00 0.00 44.50 1.82
6841 8142 5.936956 TGCACTTTGTTTGTCTTCCAAATTT 59.063 32.000 0.00 0.00 44.50 1.82
6843 8144 7.604164 TGCACTTTGTTTGTCTTCCAAATTTAA 59.396 29.630 0.00 0.00 44.50 1.52
6845 8146 8.603181 CACTTTGTTTGTCTTCCAAATTTAAGG 58.397 33.333 0.00 0.00 44.50 2.69
6847 8148 9.377312 CTTTGTTTGTCTTCCAAATTTAAGGAA 57.623 29.630 9.09 9.09 44.50 3.36
6849 8150 8.710835 TGTTTGTCTTCCAAATTTAAGGAAAC 57.289 30.769 10.32 12.91 44.50 2.78
6850 8151 7.489757 TGTTTGTCTTCCAAATTTAAGGAAACG 59.510 33.333 10.32 2.27 44.50 3.60
6852 8153 5.595133 TGTCTTCCAAATTTAAGGAAACGGT 59.405 36.000 10.32 0.00 42.91 4.83
6854 8155 7.284944 TGTCTTCCAAATTTAAGGAAACGGTTA 59.715 33.333 10.32 0.00 42.91 2.85
6855 8156 7.592533 GTCTTCCAAATTTAAGGAAACGGTTAC 59.407 37.037 10.32 0.00 42.91 2.50
6856 8157 6.956202 TCCAAATTTAAGGAAACGGTTACA 57.044 33.333 0.00 0.00 0.00 2.41
6857 8158 6.972722 TCCAAATTTAAGGAAACGGTTACAG 58.027 36.000 0.00 0.00 0.00 2.74
6858 8159 6.771749 TCCAAATTTAAGGAAACGGTTACAGA 59.228 34.615 0.00 0.00 0.00 3.41
6859 8160 7.284944 TCCAAATTTAAGGAAACGGTTACAGAA 59.715 33.333 0.00 0.00 0.00 3.02
6860 8161 7.380333 CCAAATTTAAGGAAACGGTTACAGAAC 59.620 37.037 0.00 0.00 34.56 3.01
6861 8162 7.571080 AATTTAAGGAAACGGTTACAGAACA 57.429 32.000 0.00 0.00 37.29 3.18
6862 8163 6.998968 TTTAAGGAAACGGTTACAGAACAA 57.001 33.333 0.00 0.00 37.29 2.83
6863 8164 6.607735 TTAAGGAAACGGTTACAGAACAAG 57.392 37.500 0.00 0.00 37.29 3.16
6864 8165 3.473625 AGGAAACGGTTACAGAACAAGG 58.526 45.455 0.00 0.00 37.29 3.61
6865 8166 3.135167 AGGAAACGGTTACAGAACAAGGA 59.865 43.478 0.00 0.00 37.29 3.36
6866 8167 3.878699 GGAAACGGTTACAGAACAAGGAA 59.121 43.478 0.00 0.00 37.29 3.36
6867 8168 4.336153 GGAAACGGTTACAGAACAAGGAAA 59.664 41.667 0.00 0.00 37.29 3.13
6868 8169 5.009310 GGAAACGGTTACAGAACAAGGAAAT 59.991 40.000 0.00 0.00 37.29 2.17
6869 8170 5.684550 AACGGTTACAGAACAAGGAAATC 57.315 39.130 0.00 0.00 37.29 2.17
6870 8171 4.710324 ACGGTTACAGAACAAGGAAATCA 58.290 39.130 0.00 0.00 37.29 2.57
6871 8172 4.514066 ACGGTTACAGAACAAGGAAATCAC 59.486 41.667 0.00 0.00 37.29 3.06
6872 8173 4.513692 CGGTTACAGAACAAGGAAATCACA 59.486 41.667 0.00 0.00 37.29 3.58
6873 8174 5.334105 CGGTTACAGAACAAGGAAATCACAG 60.334 44.000 0.00 0.00 37.29 3.66
6874 8175 5.531287 GGTTACAGAACAAGGAAATCACAGT 59.469 40.000 0.00 0.00 37.29 3.55
6875 8176 6.430451 GTTACAGAACAAGGAAATCACAGTG 58.570 40.000 0.00 0.00 35.48 3.66
6876 8177 4.780815 ACAGAACAAGGAAATCACAGTGA 58.219 39.130 5.50 5.50 0.00 3.41
6877 8178 5.192927 ACAGAACAAGGAAATCACAGTGAA 58.807 37.500 7.50 0.00 0.00 3.18
6878 8179 5.297776 ACAGAACAAGGAAATCACAGTGAAG 59.702 40.000 7.50 0.00 0.00 3.02
6879 8180 5.297776 CAGAACAAGGAAATCACAGTGAAGT 59.702 40.000 7.50 0.00 0.00 3.01
6880 8181 5.297776 AGAACAAGGAAATCACAGTGAAGTG 59.702 40.000 7.50 2.62 40.85 3.16
6881 8182 3.885297 ACAAGGAAATCACAGTGAAGTGG 59.115 43.478 7.50 0.00 39.93 4.00
6882 8183 3.864789 AGGAAATCACAGTGAAGTGGT 57.135 42.857 7.50 0.00 39.93 4.16
6883 8184 4.974645 AGGAAATCACAGTGAAGTGGTA 57.025 40.909 7.50 0.00 39.93 3.25
6884 8185 5.505181 AGGAAATCACAGTGAAGTGGTAT 57.495 39.130 7.50 0.00 39.93 2.73
6885 8186 5.248640 AGGAAATCACAGTGAAGTGGTATG 58.751 41.667 7.50 0.00 39.93 2.39
6886 8187 4.142600 GGAAATCACAGTGAAGTGGTATGC 60.143 45.833 7.50 0.00 39.93 3.14
6887 8188 3.701205 ATCACAGTGAAGTGGTATGCA 57.299 42.857 7.50 0.00 39.93 3.96
6888 8189 3.044235 TCACAGTGAAGTGGTATGCAG 57.956 47.619 0.00 0.00 39.93 4.41
6889 8190 1.466167 CACAGTGAAGTGGTATGCAGC 59.534 52.381 0.00 0.00 35.88 5.25
6890 8191 1.089920 CAGTGAAGTGGTATGCAGCC 58.910 55.000 3.34 3.34 0.00 4.85
6891 8192 0.692476 AGTGAAGTGGTATGCAGCCA 59.308 50.000 8.53 8.53 0.00 4.75
6892 8193 1.283029 AGTGAAGTGGTATGCAGCCAT 59.717 47.619 14.74 1.56 38.40 4.40
6893 8194 1.672881 GTGAAGTGGTATGCAGCCATC 59.327 52.381 14.74 10.32 38.40 3.51
6894 8195 1.281577 TGAAGTGGTATGCAGCCATCA 59.718 47.619 14.74 12.42 38.40 3.07
6895 8196 2.290832 TGAAGTGGTATGCAGCCATCAA 60.291 45.455 14.74 1.23 38.40 2.57
6896 8197 1.755179 AGTGGTATGCAGCCATCAAC 58.245 50.000 14.74 3.79 38.40 3.18
6897 8198 0.378257 GTGGTATGCAGCCATCAACG 59.622 55.000 14.74 0.00 38.40 4.10
6898 8199 1.356624 GGTATGCAGCCATCAACGC 59.643 57.895 5.33 0.00 32.85 4.84
6899 8200 1.375853 GGTATGCAGCCATCAACGCA 61.376 55.000 5.33 0.00 39.01 5.24
6900 8201 0.451383 GTATGCAGCCATCAACGCAA 59.549 50.000 0.00 0.00 38.01 4.85
6901 8202 0.734309 TATGCAGCCATCAACGCAAG 59.266 50.000 0.00 0.00 38.01 4.01
6902 8203 1.940883 ATGCAGCCATCAACGCAAGG 61.941 55.000 0.00 0.00 46.39 3.61
6903 8204 2.334946 GCAGCCATCAACGCAAGGA 61.335 57.895 0.00 0.00 46.39 3.36
6904 8205 1.865788 GCAGCCATCAACGCAAGGAA 61.866 55.000 0.00 0.00 46.39 3.36
6905 8206 0.169672 CAGCCATCAACGCAAGGAAG 59.830 55.000 0.00 0.00 46.39 3.46
6906 8207 0.036732 AGCCATCAACGCAAGGAAGA 59.963 50.000 0.00 0.00 46.39 2.87
6907 8208 0.449388 GCCATCAACGCAAGGAAGAG 59.551 55.000 0.00 0.00 46.39 2.85
6908 8209 1.813513 CCATCAACGCAAGGAAGAGT 58.186 50.000 0.00 0.00 46.39 3.24
6909 8210 2.154462 CCATCAACGCAAGGAAGAGTT 58.846 47.619 0.00 0.00 46.39 3.01
6910 8211 2.554032 CCATCAACGCAAGGAAGAGTTT 59.446 45.455 0.00 0.00 46.39 2.66
6911 8212 3.558505 CATCAACGCAAGGAAGAGTTTG 58.441 45.455 0.00 0.00 46.39 2.93
6912 8213 2.912771 TCAACGCAAGGAAGAGTTTGA 58.087 42.857 0.00 0.00 46.39 2.69
6913 8214 2.612212 TCAACGCAAGGAAGAGTTTGAC 59.388 45.455 0.00 0.00 46.39 3.18
6914 8215 1.594331 ACGCAAGGAAGAGTTTGACC 58.406 50.000 0.00 0.00 46.39 4.02
6915 8216 0.875059 CGCAAGGAAGAGTTTGACCC 59.125 55.000 0.00 0.00 0.00 4.46
6916 8217 1.543429 CGCAAGGAAGAGTTTGACCCT 60.543 52.381 0.00 0.00 0.00 4.34
6917 8218 2.289444 CGCAAGGAAGAGTTTGACCCTA 60.289 50.000 0.00 0.00 0.00 3.53
6918 8219 3.619979 CGCAAGGAAGAGTTTGACCCTAT 60.620 47.826 0.00 0.00 0.00 2.57
6919 8220 3.691609 GCAAGGAAGAGTTTGACCCTATG 59.308 47.826 0.00 0.00 0.00 2.23
6920 8221 3.636153 AGGAAGAGTTTGACCCTATGC 57.364 47.619 0.00 0.00 0.00 3.14
6921 8222 3.185455 AGGAAGAGTTTGACCCTATGCT 58.815 45.455 0.00 0.00 0.00 3.79
6922 8223 3.589288 AGGAAGAGTTTGACCCTATGCTT 59.411 43.478 0.00 0.00 0.00 3.91
6923 8224 3.691609 GGAAGAGTTTGACCCTATGCTTG 59.308 47.826 0.00 0.00 0.00 4.01
6924 8225 4.565652 GGAAGAGTTTGACCCTATGCTTGA 60.566 45.833 0.00 0.00 0.00 3.02
6925 8226 4.640771 AGAGTTTGACCCTATGCTTGAA 57.359 40.909 0.00 0.00 0.00 2.69
6926 8227 5.184892 AGAGTTTGACCCTATGCTTGAAT 57.815 39.130 0.00 0.00 0.00 2.57
6927 8228 6.313519 AGAGTTTGACCCTATGCTTGAATA 57.686 37.500 0.00 0.00 0.00 1.75
6928 8229 6.116126 AGAGTTTGACCCTATGCTTGAATAC 58.884 40.000 0.00 0.00 0.00 1.89
6929 8230 5.193679 AGTTTGACCCTATGCTTGAATACC 58.806 41.667 0.00 0.00 0.00 2.73
6930 8231 4.853468 TTGACCCTATGCTTGAATACCA 57.147 40.909 0.00 0.00 0.00 3.25
6931 8232 4.853468 TGACCCTATGCTTGAATACCAA 57.147 40.909 0.00 0.00 0.00 3.67
6932 8233 5.387113 TGACCCTATGCTTGAATACCAAT 57.613 39.130 0.00 0.00 33.68 3.16
6933 8234 5.765510 TGACCCTATGCTTGAATACCAATT 58.234 37.500 0.00 0.00 33.68 2.32
6934 8235 6.194235 TGACCCTATGCTTGAATACCAATTT 58.806 36.000 0.00 0.00 33.68 1.82
6935 8236 6.096705 TGACCCTATGCTTGAATACCAATTTG 59.903 38.462 0.00 0.00 33.68 2.32
6936 8237 6.194235 ACCCTATGCTTGAATACCAATTTGA 58.806 36.000 0.00 0.00 33.68 2.69
6937 8238 6.840705 ACCCTATGCTTGAATACCAATTTGAT 59.159 34.615 0.00 0.00 33.68 2.57
6938 8239 7.345392 ACCCTATGCTTGAATACCAATTTGATT 59.655 33.333 0.00 0.00 33.68 2.57
6939 8240 7.869429 CCCTATGCTTGAATACCAATTTGATTC 59.131 37.037 0.00 1.38 33.68 2.52
6940 8241 8.636213 CCTATGCTTGAATACCAATTTGATTCT 58.364 33.333 10.45 0.00 33.68 2.40
6943 8244 8.761575 TGCTTGAATACCAATTTGATTCTTTC 57.238 30.769 10.45 3.18 33.68 2.62
6944 8245 8.587608 TGCTTGAATACCAATTTGATTCTTTCT 58.412 29.630 10.45 0.00 33.68 2.52
6945 8246 9.080915 GCTTGAATACCAATTTGATTCTTTCTC 57.919 33.333 10.45 0.00 33.68 2.87
6959 8260 9.521503 TTGATTCTTTCTCTATGTAGACGATTG 57.478 33.333 0.00 0.00 0.00 2.67
6960 8261 8.903820 TGATTCTTTCTCTATGTAGACGATTGA 58.096 33.333 0.00 0.00 0.00 2.57
6961 8262 9.393249 GATTCTTTCTCTATGTAGACGATTGAG 57.607 37.037 0.00 0.00 0.00 3.02
6962 8263 7.265647 TCTTTCTCTATGTAGACGATTGAGG 57.734 40.000 0.00 0.00 0.00 3.86
6963 8264 7.054751 TCTTTCTCTATGTAGACGATTGAGGA 58.945 38.462 0.00 0.00 0.00 3.71
6964 8265 7.721842 TCTTTCTCTATGTAGACGATTGAGGAT 59.278 37.037 0.00 0.00 0.00 3.24
6965 8266 7.825331 TTCTCTATGTAGACGATTGAGGATT 57.175 36.000 0.00 0.00 0.00 3.01
6966 8267 7.825331 TCTCTATGTAGACGATTGAGGATTT 57.175 36.000 0.00 0.00 0.00 2.17
6967 8268 7.652727 TCTCTATGTAGACGATTGAGGATTTG 58.347 38.462 0.00 0.00 0.00 2.32
6968 8269 6.749139 TCTATGTAGACGATTGAGGATTTGG 58.251 40.000 0.00 0.00 0.00 3.28
6969 8270 3.531538 TGTAGACGATTGAGGATTTGGC 58.468 45.455 0.00 0.00 0.00 4.52
6970 8271 2.787473 AGACGATTGAGGATTTGGCA 57.213 45.000 0.00 0.00 0.00 4.92
6971 8272 2.636830 AGACGATTGAGGATTTGGCAG 58.363 47.619 0.00 0.00 0.00 4.85
6972 8273 2.026822 AGACGATTGAGGATTTGGCAGT 60.027 45.455 0.00 0.00 0.00 4.40
6973 8274 2.086869 ACGATTGAGGATTTGGCAGTG 58.913 47.619 0.00 0.00 0.00 3.66
6974 8275 2.086869 CGATTGAGGATTTGGCAGTGT 58.913 47.619 0.00 0.00 0.00 3.55
6975 8276 2.489329 CGATTGAGGATTTGGCAGTGTT 59.511 45.455 0.00 0.00 0.00 3.32
6976 8277 3.426695 CGATTGAGGATTTGGCAGTGTTC 60.427 47.826 0.00 0.00 0.00 3.18
6977 8278 2.655090 TGAGGATTTGGCAGTGTTCA 57.345 45.000 0.00 0.00 0.00 3.18
6978 8279 2.942804 TGAGGATTTGGCAGTGTTCAA 58.057 42.857 0.00 0.00 0.00 2.69
6979 8280 2.886523 TGAGGATTTGGCAGTGTTCAAG 59.113 45.455 0.00 0.00 0.00 3.02
6980 8281 2.229784 GAGGATTTGGCAGTGTTCAAGG 59.770 50.000 0.00 0.00 0.00 3.61
6981 8282 2.158475 AGGATTTGGCAGTGTTCAAGGA 60.158 45.455 0.00 0.00 0.00 3.36
6982 8283 2.229784 GGATTTGGCAGTGTTCAAGGAG 59.770 50.000 0.00 0.00 0.00 3.69
6983 8284 1.691196 TTTGGCAGTGTTCAAGGAGG 58.309 50.000 0.00 0.00 0.00 4.30
6984 8285 0.823356 TTGGCAGTGTTCAAGGAGGC 60.823 55.000 0.00 0.00 0.00 4.70
6985 8286 1.228245 GGCAGTGTTCAAGGAGGCA 60.228 57.895 0.00 0.00 0.00 4.75
6986 8287 1.239968 GGCAGTGTTCAAGGAGGCAG 61.240 60.000 0.00 0.00 0.00 4.85
6987 8288 1.239968 GCAGTGTTCAAGGAGGCAGG 61.240 60.000 0.00 0.00 0.00 4.85
6988 8289 0.607489 CAGTGTTCAAGGAGGCAGGG 60.607 60.000 0.00 0.00 0.00 4.45
6989 8290 1.973812 GTGTTCAAGGAGGCAGGGC 60.974 63.158 0.00 0.00 0.00 5.19
6990 8291 2.436109 GTTCAAGGAGGCAGGGCA 59.564 61.111 0.00 0.00 0.00 5.36
6991 8292 1.228552 GTTCAAGGAGGCAGGGCAA 60.229 57.895 0.00 0.00 0.00 4.52
6992 8293 0.827507 GTTCAAGGAGGCAGGGCAAA 60.828 55.000 0.00 0.00 0.00 3.68
6993 8294 0.105760 TTCAAGGAGGCAGGGCAAAA 60.106 50.000 0.00 0.00 0.00 2.44
6994 8295 0.105760 TCAAGGAGGCAGGGCAAAAA 60.106 50.000 0.00 0.00 0.00 1.94
7015 8316 4.551702 AAATTAATCTTTGGGGTGTGGC 57.448 40.909 0.00 0.00 0.00 5.01
7016 8317 1.931635 TTAATCTTTGGGGTGTGGCC 58.068 50.000 0.00 0.00 0.00 5.36
7017 8318 0.322997 TAATCTTTGGGGTGTGGCCG 60.323 55.000 0.00 0.00 38.44 6.13
7018 8319 2.075355 AATCTTTGGGGTGTGGCCGA 62.075 55.000 0.00 0.00 38.44 5.54
7019 8320 2.075355 ATCTTTGGGGTGTGGCCGAA 62.075 55.000 0.00 0.00 38.44 4.30
7020 8321 1.830408 CTTTGGGGTGTGGCCGAAA 60.830 57.895 0.00 0.00 38.44 3.46
7021 8322 1.805428 CTTTGGGGTGTGGCCGAAAG 61.805 60.000 0.00 0.00 38.44 2.62
7022 8323 2.575455 TTTGGGGTGTGGCCGAAAGT 62.575 55.000 0.00 0.00 38.44 2.66
7023 8324 2.203437 GGGGTGTGGCCGAAAGTT 60.203 61.111 0.00 0.00 38.44 2.66
7024 8325 2.561037 GGGGTGTGGCCGAAAGTTG 61.561 63.158 0.00 0.00 38.44 3.16
7025 8326 1.826487 GGGTGTGGCCGAAAGTTGT 60.826 57.895 0.00 0.00 38.44 3.32
7026 8327 1.358759 GGTGTGGCCGAAAGTTGTG 59.641 57.895 0.00 0.00 0.00 3.33
7027 8328 1.381165 GGTGTGGCCGAAAGTTGTGT 61.381 55.000 0.00 0.00 0.00 3.72
7028 8329 0.248458 GTGTGGCCGAAAGTTGTGTG 60.248 55.000 0.00 0.00 0.00 3.82
7029 8330 1.299089 GTGGCCGAAAGTTGTGTGC 60.299 57.895 0.00 0.00 0.00 4.57
7030 8331 1.750780 TGGCCGAAAGTTGTGTGCA 60.751 52.632 0.00 0.00 0.00 4.57
7031 8332 1.315981 TGGCCGAAAGTTGTGTGCAA 61.316 50.000 0.00 0.00 0.00 4.08
7032 8333 0.179124 GGCCGAAAGTTGTGTGCAAA 60.179 50.000 0.00 0.00 36.22 3.68
7033 8334 1.199624 GCCGAAAGTTGTGTGCAAAG 58.800 50.000 0.00 0.00 36.22 2.77
7034 8335 1.202245 GCCGAAAGTTGTGTGCAAAGA 60.202 47.619 0.00 0.00 36.22 2.52
7035 8336 2.719798 CCGAAAGTTGTGTGCAAAGAG 58.280 47.619 0.00 0.00 36.22 2.85
7036 8337 2.097466 CCGAAAGTTGTGTGCAAAGAGT 59.903 45.455 0.00 0.00 36.22 3.24
7037 8338 3.100817 CGAAAGTTGTGTGCAAAGAGTG 58.899 45.455 0.00 0.00 36.22 3.51
7038 8339 3.426159 CGAAAGTTGTGTGCAAAGAGTGT 60.426 43.478 0.00 0.00 36.22 3.55
7039 8340 4.485163 GAAAGTTGTGTGCAAAGAGTGTT 58.515 39.130 0.00 0.00 36.22 3.32
7040 8341 3.492421 AGTTGTGTGCAAAGAGTGTTG 57.508 42.857 0.00 0.00 36.22 3.33
7041 8342 2.164219 AGTTGTGTGCAAAGAGTGTTGG 59.836 45.455 0.00 0.00 36.22 3.77
7042 8343 0.455410 TGTGTGCAAAGAGTGTTGGC 59.545 50.000 0.00 0.00 0.00 4.52
7043 8344 0.592247 GTGTGCAAAGAGTGTTGGCG 60.592 55.000 0.00 0.00 0.00 5.69
7044 8345 0.746204 TGTGCAAAGAGTGTTGGCGA 60.746 50.000 0.00 0.00 0.00 5.54
7045 8346 0.317020 GTGCAAAGAGTGTTGGCGAC 60.317 55.000 0.00 0.00 0.00 5.19
7046 8347 0.746204 TGCAAAGAGTGTTGGCGACA 60.746 50.000 2.68 2.68 39.83 4.35
7083 8604 5.454755 GGGGCTGCATAAAAGTAGATAGTCA 60.455 44.000 0.50 0.00 0.00 3.41
7119 8640 6.899393 AAATCACATCTTTCACTTGCCTAA 57.101 33.333 0.00 0.00 0.00 2.69
7168 8705 3.005578 ACCAGAGTTTCTCCTGTACGTTC 59.994 47.826 0.00 0.00 0.00 3.95
7173 8710 3.896272 AGTTTCTCCTGTACGTTCTTCCT 59.104 43.478 0.00 0.00 0.00 3.36
7198 8735 6.071672 TGAGAAGAGGAAGAACTGTGACATAG 60.072 42.308 0.00 0.00 0.00 2.23
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 5.016831 AGGTAGGGCAAAACAATAAAGAGG 58.983 41.667 0.00 0.00 0.00 3.69
21 22 2.790433 TCACATCAGGTAGGGCAAAAC 58.210 47.619 0.00 0.00 0.00 2.43
44 45 0.245539 AGCATGCATTGGACAACTGC 59.754 50.000 21.98 0.00 36.45 4.40
45 46 2.333926 CAAGCATGCATTGGACAACTG 58.666 47.619 21.98 0.00 0.00 3.16
107 110 5.347124 TCCAGTGAGGGAATAGGTAAAAGA 58.653 41.667 0.00 0.00 38.24 2.52
164 167 3.773418 TTCCTGACGGGATTAACAACA 57.227 42.857 3.15 0.00 44.66 3.33
167 170 4.529377 ACTACTTTCCTGACGGGATTAACA 59.471 41.667 3.15 0.00 44.66 2.41
216 219 9.715121 AAGCTGGCCAATTATATTTTAATCATG 57.285 29.630 7.01 0.00 0.00 3.07
226 229 9.759473 AATTAGATGTAAGCTGGCCAATTATAT 57.241 29.630 7.01 12.62 30.71 0.86
304 307 8.483758 AGACTAAAAAGAAACAGAGGAAGTACA 58.516 33.333 0.00 0.00 0.00 2.90
305 308 8.766151 CAGACTAAAAAGAAACAGAGGAAGTAC 58.234 37.037 0.00 0.00 0.00 2.73
306 309 7.441458 GCAGACTAAAAAGAAACAGAGGAAGTA 59.559 37.037 0.00 0.00 0.00 2.24
307 310 6.261158 GCAGACTAAAAAGAAACAGAGGAAGT 59.739 38.462 0.00 0.00 0.00 3.01
308 311 6.260936 TGCAGACTAAAAAGAAACAGAGGAAG 59.739 38.462 0.00 0.00 0.00 3.46
309 312 6.119536 TGCAGACTAAAAAGAAACAGAGGAA 58.880 36.000 0.00 0.00 0.00 3.36
310 313 5.680619 TGCAGACTAAAAAGAAACAGAGGA 58.319 37.500 0.00 0.00 0.00 3.71
311 314 6.566197 ATGCAGACTAAAAAGAAACAGAGG 57.434 37.500 0.00 0.00 0.00 3.69
314 317 9.994432 CCTTATATGCAGACTAAAAAGAAACAG 57.006 33.333 0.00 0.00 0.00 3.16
315 318 9.515226 ACCTTATATGCAGACTAAAAAGAAACA 57.485 29.630 0.00 0.00 0.00 2.83
319 322 8.956426 CCAAACCTTATATGCAGACTAAAAAGA 58.044 33.333 0.00 0.00 0.00 2.52
320 323 8.190784 CCCAAACCTTATATGCAGACTAAAAAG 58.809 37.037 0.00 0.00 0.00 2.27
321 324 7.363443 GCCCAAACCTTATATGCAGACTAAAAA 60.363 37.037 0.00 0.00 0.00 1.94
322 325 6.096282 GCCCAAACCTTATATGCAGACTAAAA 59.904 38.462 0.00 0.00 0.00 1.52
323 326 5.592688 GCCCAAACCTTATATGCAGACTAAA 59.407 40.000 0.00 0.00 0.00 1.85
324 327 5.130350 GCCCAAACCTTATATGCAGACTAA 58.870 41.667 0.00 0.00 0.00 2.24
325 328 4.165180 TGCCCAAACCTTATATGCAGACTA 59.835 41.667 0.00 0.00 0.00 2.59
326 329 3.053693 TGCCCAAACCTTATATGCAGACT 60.054 43.478 0.00 0.00 0.00 3.24
327 330 3.287222 TGCCCAAACCTTATATGCAGAC 58.713 45.455 0.00 0.00 0.00 3.51
328 331 3.660970 TGCCCAAACCTTATATGCAGA 57.339 42.857 0.00 0.00 0.00 4.26
329 332 4.160252 ACTTTGCCCAAACCTTATATGCAG 59.840 41.667 0.00 0.00 0.00 4.41
330 333 4.093011 ACTTTGCCCAAACCTTATATGCA 58.907 39.130 0.00 0.00 0.00 3.96
331 334 4.159506 TGACTTTGCCCAAACCTTATATGC 59.840 41.667 0.00 0.00 0.00 3.14
332 335 5.913137 TGACTTTGCCCAAACCTTATATG 57.087 39.130 0.00 0.00 0.00 1.78
333 336 5.105351 GCTTGACTTTGCCCAAACCTTATAT 60.105 40.000 0.00 0.00 0.00 0.86
334 337 4.219725 GCTTGACTTTGCCCAAACCTTATA 59.780 41.667 0.00 0.00 0.00 0.98
335 338 3.006859 GCTTGACTTTGCCCAAACCTTAT 59.993 43.478 0.00 0.00 0.00 1.73
336 339 2.364002 GCTTGACTTTGCCCAAACCTTA 59.636 45.455 0.00 0.00 0.00 2.69
337 340 1.138859 GCTTGACTTTGCCCAAACCTT 59.861 47.619 0.00 0.00 0.00 3.50
338 341 0.752658 GCTTGACTTTGCCCAAACCT 59.247 50.000 0.00 0.00 0.00 3.50
339 342 0.752658 AGCTTGACTTTGCCCAAACC 59.247 50.000 0.00 0.00 0.00 3.27
340 343 2.602257 AAGCTTGACTTTGCCCAAAC 57.398 45.000 0.00 0.00 33.71 2.93
350 353 9.516314 GTTAGTCAAATTTTACAAAGCTTGACT 57.484 29.630 23.05 23.05 44.64 3.41
351 354 9.516314 AGTTAGTCAAATTTTACAAAGCTTGAC 57.484 29.630 0.00 15.93 39.30 3.18
407 410 9.749340 TGAGGCATCTGATATTATTGATTTCAT 57.251 29.630 0.00 0.00 0.00 2.57
408 411 9.749340 ATGAGGCATCTGATATTATTGATTTCA 57.251 29.630 0.00 0.00 0.00 2.69
410 413 9.749340 TCATGAGGCATCTGATATTATTGATTT 57.251 29.630 0.00 0.00 0.00 2.17
411 414 9.749340 TTCATGAGGCATCTGATATTATTGATT 57.251 29.630 0.00 0.00 0.00 2.57
412 415 9.749340 TTTCATGAGGCATCTGATATTATTGAT 57.251 29.630 0.00 0.00 0.00 2.57
413 416 9.749340 ATTTCATGAGGCATCTGATATTATTGA 57.251 29.630 0.00 0.00 0.00 2.57
414 417 9.788960 CATTTCATGAGGCATCTGATATTATTG 57.211 33.333 0.00 0.00 0.00 1.90
415 418 9.529823 ACATTTCATGAGGCATCTGATATTATT 57.470 29.630 0.00 0.00 0.00 1.40
418 421 9.529823 AATACATTTCATGAGGCATCTGATATT 57.470 29.630 0.00 0.60 0.00 1.28
419 422 9.529823 AAATACATTTCATGAGGCATCTGATAT 57.470 29.630 0.00 0.00 0.00 1.63
420 423 8.929260 AAATACATTTCATGAGGCATCTGATA 57.071 30.769 0.00 0.00 0.00 2.15
421 424 7.834881 AAATACATTTCATGAGGCATCTGAT 57.165 32.000 0.00 0.00 0.00 2.90
422 425 7.649533 AAAATACATTTCATGAGGCATCTGA 57.350 32.000 0.00 0.00 0.00 3.27
423 426 7.925703 GAAAATACATTTCATGAGGCATCTG 57.074 36.000 0.00 0.00 45.58 2.90
532 535 9.657728 TCCCTTTCTTTTTACCCAAAGTATAAA 57.342 29.630 0.00 0.00 35.56 1.40
533 536 9.304335 CTCCCTTTCTTTTTACCCAAAGTATAA 57.696 33.333 0.00 0.00 35.56 0.98
534 537 7.891712 CCTCCCTTTCTTTTTACCCAAAGTATA 59.108 37.037 0.00 0.00 35.56 1.47
535 538 6.724441 CCTCCCTTTCTTTTTACCCAAAGTAT 59.276 38.462 0.00 0.00 35.56 2.12
536 539 6.072649 CCTCCCTTTCTTTTTACCCAAAGTA 58.927 40.000 0.00 0.00 35.56 2.24
537 540 4.899457 CCTCCCTTTCTTTTTACCCAAAGT 59.101 41.667 0.00 0.00 35.56 2.66
538 541 4.283467 CCCTCCCTTTCTTTTTACCCAAAG 59.717 45.833 0.00 0.00 35.39 2.77
539 542 4.078513 TCCCTCCCTTTCTTTTTACCCAAA 60.079 41.667 0.00 0.00 0.00 3.28
540 543 3.467863 TCCCTCCCTTTCTTTTTACCCAA 59.532 43.478 0.00 0.00 0.00 4.12
541 544 3.065175 TCCCTCCCTTTCTTTTTACCCA 58.935 45.455 0.00 0.00 0.00 4.51
542 545 3.075582 ACTCCCTCCCTTTCTTTTTACCC 59.924 47.826 0.00 0.00 0.00 3.69
543 546 4.383931 ACTCCCTCCCTTTCTTTTTACC 57.616 45.455 0.00 0.00 0.00 2.85
544 547 6.124316 AGTACTCCCTCCCTTTCTTTTTAC 57.876 41.667 0.00 0.00 0.00 2.01
545 548 6.775234 AAGTACTCCCTCCCTTTCTTTTTA 57.225 37.500 0.00 0.00 0.00 1.52
546 549 5.664815 AAGTACTCCCTCCCTTTCTTTTT 57.335 39.130 0.00 0.00 0.00 1.94
547 550 5.133830 TCAAAGTACTCCCTCCCTTTCTTTT 59.866 40.000 0.00 0.00 0.00 2.27
548 551 4.663592 TCAAAGTACTCCCTCCCTTTCTTT 59.336 41.667 0.00 0.00 0.00 2.52
549 552 4.240323 TCAAAGTACTCCCTCCCTTTCTT 58.760 43.478 0.00 0.00 0.00 2.52
550 553 3.870559 TCAAAGTACTCCCTCCCTTTCT 58.129 45.455 0.00 0.00 0.00 2.52
551 554 4.635699 TTCAAAGTACTCCCTCCCTTTC 57.364 45.455 0.00 0.00 0.00 2.62
552 555 5.600669 AATTCAAAGTACTCCCTCCCTTT 57.399 39.130 0.00 0.00 0.00 3.11
553 556 5.600669 AAATTCAAAGTACTCCCTCCCTT 57.399 39.130 0.00 0.00 0.00 3.95
554 557 6.217693 ACATAAATTCAAAGTACTCCCTCCCT 59.782 38.462 0.00 0.00 0.00 4.20
555 558 6.424032 ACATAAATTCAAAGTACTCCCTCCC 58.576 40.000 0.00 0.00 0.00 4.30
556 559 7.939784 AACATAAATTCAAAGTACTCCCTCC 57.060 36.000 0.00 0.00 0.00 4.30
759 762 5.307196 ACAGGTGACAAGTAGACCTAACAAT 59.693 40.000 0.00 0.00 38.07 2.71
822 828 8.629986 CGCAACTTAACAAATCAAGTATGAAAG 58.370 33.333 0.00 0.00 39.49 2.62
847 856 6.207025 AGAGGTAGTATGTAAGTTCTATGGCG 59.793 42.308 0.00 0.00 0.00 5.69
967 991 5.948162 ACATCAGTTAATCAGCTTCCAACAT 59.052 36.000 0.00 0.00 0.00 2.71
1014 1038 2.930562 GGTGGTGGCAGGTCCTCT 60.931 66.667 0.00 0.00 35.26 3.69
1017 1041 4.660938 GGTGGTGGTGGCAGGTCC 62.661 72.222 0.00 0.00 0.00 4.46
1106 1130 3.244875 TGCTTCTTCAGGTTTGATAGGCA 60.245 43.478 0.00 0.00 32.76 4.75
1242 1266 9.133627 CATACATAGTAATGATGGAAGAACTCG 57.866 37.037 0.00 0.00 36.54 4.18
1473 1497 3.267031 AGGCAAAGTCTTTATGGGCTAGT 59.733 43.478 8.05 0.00 0.00 2.57
1572 1596 7.996644 AGAGTTAATTACTTTCCACTGGAAACA 59.003 33.333 17.88 7.42 45.42 2.83
1824 1857 1.141657 GCACTCATGGGGATTCTAGCA 59.858 52.381 0.00 0.00 0.00 3.49
1987 2020 7.067859 CCATGGAATATCAACACTGAGAACAAT 59.932 37.037 5.56 0.00 34.23 2.71
2259 2303 6.291849 GCAGTAGCTGTAAATATGAACTGTCG 60.292 42.308 0.00 0.00 36.38 4.35
2337 2381 0.109132 GGTTGGCCAGCAGAAAATCG 60.109 55.000 22.07 0.00 34.09 3.34
2485 2531 0.533308 ACGCTTGGCCTACGAAAACA 60.533 50.000 17.48 0.00 0.00 2.83
2491 2537 3.788766 GTGCACGCTTGGCCTACG 61.789 66.667 3.32 7.77 0.00 3.51
2603 2649 8.769891 CACTTACATACAACAAATGGCGATATA 58.230 33.333 0.00 0.00 0.00 0.86
2608 2654 4.411327 CCACTTACATACAACAAATGGCG 58.589 43.478 0.00 0.00 0.00 5.69
2610 2656 4.411327 CGCCACTTACATACAACAAATGG 58.589 43.478 0.00 0.00 0.00 3.16
2622 2668 6.503589 ACAATTAATTAAGCGCCACTTACA 57.496 33.333 2.29 0.00 40.63 2.41
2623 2669 7.201401 CCAAACAATTAATTAAGCGCCACTTAC 60.201 37.037 2.29 0.00 40.63 2.34
2627 2673 5.061684 GTCCAAACAATTAATTAAGCGCCAC 59.938 40.000 2.29 0.00 0.00 5.01
2668 2715 6.630443 CGCTCTCAATAAAATCTACAATGCAC 59.370 38.462 0.00 0.00 0.00 4.57
3043 3121 9.227777 GTACTCAAAGATTTGGTATACCTTTGT 57.772 33.333 22.41 11.20 42.34 2.83
3254 3335 3.153130 TCGAAATTCCACATGCCTTCAA 58.847 40.909 0.00 0.00 0.00 2.69
3283 3364 1.074951 AGCCACCTGTGTAAAGCCC 59.925 57.895 0.00 0.00 0.00 5.19
3292 3373 0.908180 GTACCCTACCAGCCACCTGT 60.908 60.000 0.00 0.00 37.38 4.00
3295 3376 1.905512 CAGTACCCTACCAGCCACC 59.094 63.158 0.00 0.00 0.00 4.61
3394 3475 8.893219 TGAGCTACATTACAGGATTCAATAAG 57.107 34.615 0.00 0.00 0.00 1.73
3506 3587 9.719355 TGAAAACATGCAGTATAAAAGAGTAGA 57.281 29.630 0.00 0.00 0.00 2.59
3519 3600 7.095523 GCAAAGTTATGATTGAAAACATGCAGT 60.096 33.333 0.00 0.00 37.76 4.40
3598 3679 4.514066 CACCTAGCCGAAAAGTTTACAACT 59.486 41.667 0.00 0.00 45.46 3.16
3708 3789 8.506168 AAGAGTGAGTACAAAAACATTTCAGA 57.494 30.769 0.00 0.00 0.00 3.27
3738 3819 7.555965 AGGTTTTTCTACTGTCTGCAAATTTT 58.444 30.769 0.00 0.00 0.00 1.82
3865 3946 7.041780 TCAGCAAGAATACACAAGAGAAACTTC 60.042 37.037 0.00 0.00 36.61 3.01
4027 4108 2.396590 TTTCGCTTCCATGGACCTAC 57.603 50.000 15.91 3.07 0.00 3.18
4161 4242 7.138692 AGCACTGTTTCAATAAGAATGAGAC 57.861 36.000 0.00 0.00 35.83 3.36
4165 4246 9.630098 AATGTAAGCACTGTTTCAATAAGAATG 57.370 29.630 0.00 0.00 35.83 2.67
4247 4334 5.838521 ACTTGGGGACATTTCAATTTGTAGT 59.161 36.000 0.00 0.00 42.32 2.73
4381 4470 8.709308 AGATTTGGAAGTACTATAATGCAGAGT 58.291 33.333 0.00 0.00 32.23 3.24
4423 4522 9.117223 ACATAATAGGTATCTTAGATTTGGGCT 57.883 33.333 0.00 0.00 0.00 5.19
4648 4760 3.878778 ACATCAAGAGAACCACCATAGC 58.121 45.455 0.00 0.00 0.00 2.97
4671 4783 3.375299 CCGGAATAGCAACAGGAAAAGAG 59.625 47.826 0.00 0.00 0.00 2.85
4693 4805 2.365617 TGAGACACTCCCTGAAACAGTC 59.634 50.000 0.00 0.00 0.00 3.51
4779 4891 9.297037 ACATTTGCAAGTAGTTATTTAGGAAGT 57.703 29.630 0.00 0.00 0.00 3.01
4813 4959 3.711704 ACCCTGGTATGTCTCCAATACTG 59.288 47.826 0.00 0.00 34.35 2.74
4814 4960 3.967987 GACCCTGGTATGTCTCCAATACT 59.032 47.826 0.00 0.00 34.35 2.12
4815 4961 3.243771 CGACCCTGGTATGTCTCCAATAC 60.244 52.174 0.00 0.00 34.35 1.89
4816 4962 2.963101 CGACCCTGGTATGTCTCCAATA 59.037 50.000 0.00 0.00 34.35 1.90
4817 4963 1.762957 CGACCCTGGTATGTCTCCAAT 59.237 52.381 0.00 0.00 34.35 3.16
4818 4964 1.191535 CGACCCTGGTATGTCTCCAA 58.808 55.000 0.00 0.00 34.35 3.53
4819 4965 0.040646 ACGACCCTGGTATGTCTCCA 59.959 55.000 0.00 0.00 0.00 3.86
4820 4966 1.136500 GAACGACCCTGGTATGTCTCC 59.864 57.143 0.00 0.00 0.00 3.71
4821 4967 1.822990 TGAACGACCCTGGTATGTCTC 59.177 52.381 0.00 0.00 0.00 3.36
4822 4968 1.825474 CTGAACGACCCTGGTATGTCT 59.175 52.381 0.00 0.00 0.00 3.41
4823 4969 1.549170 ACTGAACGACCCTGGTATGTC 59.451 52.381 0.00 0.00 0.00 3.06
4824 4970 1.640917 ACTGAACGACCCTGGTATGT 58.359 50.000 0.00 0.00 0.00 2.29
4825 4971 2.289444 ACAACTGAACGACCCTGGTATG 60.289 50.000 0.00 0.00 0.00 2.39
4826 4972 1.975680 ACAACTGAACGACCCTGGTAT 59.024 47.619 0.00 0.00 0.00 2.73
4827 4973 1.416243 ACAACTGAACGACCCTGGTA 58.584 50.000 0.00 0.00 0.00 3.25
4828 4974 1.416243 TACAACTGAACGACCCTGGT 58.584 50.000 0.00 0.00 0.00 4.00
4829 4975 2.762535 ATACAACTGAACGACCCTGG 57.237 50.000 0.00 0.00 0.00 4.45
4830 4976 4.713824 TCTATACAACTGAACGACCCTG 57.286 45.455 0.00 0.00 0.00 4.45
4831 4977 5.395324 CCATTCTATACAACTGAACGACCCT 60.395 44.000 0.00 0.00 0.00 4.34
4832 4978 4.809426 CCATTCTATACAACTGAACGACCC 59.191 45.833 0.00 0.00 0.00 4.46
4833 4979 5.416947 ACCATTCTATACAACTGAACGACC 58.583 41.667 0.00 0.00 0.00 4.79
4834 4980 6.672357 GCAACCATTCTATACAACTGAACGAC 60.672 42.308 0.00 0.00 0.00 4.34
4835 4981 5.350365 GCAACCATTCTATACAACTGAACGA 59.650 40.000 0.00 0.00 0.00 3.85
4836 4982 5.447279 GGCAACCATTCTATACAACTGAACG 60.447 44.000 0.00 0.00 0.00 3.95
4837 4983 5.648092 AGGCAACCATTCTATACAACTGAAC 59.352 40.000 0.00 0.00 37.17 3.18
4838 4984 5.647658 CAGGCAACCATTCTATACAACTGAA 59.352 40.000 0.00 0.00 37.17 3.02
4839 4985 5.045942 TCAGGCAACCATTCTATACAACTGA 60.046 40.000 0.00 0.00 37.17 3.41
4840 4986 5.185454 TCAGGCAACCATTCTATACAACTG 58.815 41.667 0.00 0.00 37.17 3.16
4841 4987 5.435686 TCAGGCAACCATTCTATACAACT 57.564 39.130 0.00 0.00 37.17 3.16
4842 4988 6.699575 AATCAGGCAACCATTCTATACAAC 57.300 37.500 0.00 0.00 37.17 3.32
4843 4989 7.615365 AGAAAATCAGGCAACCATTCTATACAA 59.385 33.333 0.00 0.00 37.17 2.41
4844 4990 7.118723 AGAAAATCAGGCAACCATTCTATACA 58.881 34.615 0.00 0.00 37.17 2.29
4845 4991 7.573968 AGAAAATCAGGCAACCATTCTATAC 57.426 36.000 0.00 0.00 37.17 1.47
4846 4992 7.833682 TCAAGAAAATCAGGCAACCATTCTATA 59.166 33.333 0.00 0.00 37.17 1.31
5119 5425 4.399004 TTTGGTGTGGTGATTTTTCTGG 57.601 40.909 0.00 0.00 0.00 3.86
5140 5446 5.306678 GTCAGGAGATCCAGGTATGAAGAAT 59.693 44.000 0.92 0.00 38.89 2.40
5186 5492 6.183360 GGATAGAATACAGCAGACAAGTGGTA 60.183 42.308 0.00 0.00 0.00 3.25
5359 5675 6.153340 ACTTAACAAGCAAATATGATGCACCT 59.847 34.615 14.23 0.00 46.22 4.00
5383 5699 0.661020 ACAGCACTACGGCAAAACAC 59.339 50.000 0.00 0.00 35.83 3.32
5418 5734 7.899973 ACAGATGGATCAAAACTTTTAGCATT 58.100 30.769 0.00 0.00 0.00 3.56
5420 5736 6.899393 ACAGATGGATCAAAACTTTTAGCA 57.101 33.333 0.00 0.00 0.00 3.49
5435 5796 4.546674 TGAGAATAGTGGCTACAGATGGA 58.453 43.478 2.02 0.00 0.00 3.41
5449 5810 5.543507 ACTAGGGCAGACAATGAGAATAG 57.456 43.478 0.00 0.00 0.00 1.73
5497 5933 3.153919 GCCATTAACAAAGGTGACAGGA 58.846 45.455 0.00 0.00 0.00 3.86
5504 5940 3.304829 ACAAGGTGCCATTAACAAAGGT 58.695 40.909 0.00 0.00 0.00 3.50
5607 6043 7.115378 CCACAAAGTGATTACTCTTGCAAAATC 59.885 37.037 12.62 12.62 35.69 2.17
5614 6050 6.618287 TCAACCACAAAGTGATTACTCTTG 57.382 37.500 0.00 9.44 35.69 3.02
5679 6919 3.042682 TGTCCCACTGACCAGAGTTTTA 58.957 45.455 3.76 0.00 43.78 1.52
5854 7099 3.181491 ACAACAAACTGGAAATGGTCACG 60.181 43.478 0.00 0.00 0.00 4.35
5860 7105 4.027572 ACACGACAACAAACTGGAAATG 57.972 40.909 0.00 0.00 0.00 2.32
5876 7121 7.569639 AGATTAGCTTATCAAGTCTACACGA 57.430 36.000 14.72 0.00 0.00 4.35
5888 7136 9.226345 GCAACACACAAATAAGATTAGCTTATC 57.774 33.333 4.51 4.51 46.52 1.75
5890 7138 8.105097 TGCAACACACAAATAAGATTAGCTTA 57.895 30.769 0.00 0.00 42.92 3.09
5934 7182 4.594491 TCATCATGCAGGATATGGTAGTGT 59.406 41.667 14.40 0.00 0.00 3.55
5970 7218 2.315781 GATCCTGCAGGTCATCCGCA 62.316 60.000 31.58 10.93 39.47 5.69
6085 7333 7.254852 GTTCACAAGACTAACAACATTGGAAA 58.745 34.615 0.00 0.00 0.00 3.13
6220 7470 2.667199 TGGCTCGACGACGTCTCA 60.667 61.111 24.36 14.31 40.69 3.27
6478 7765 2.447047 ACCCTGACAGGATTCAAAGGTT 59.553 45.455 23.77 0.00 37.67 3.50
6479 7766 2.065799 ACCCTGACAGGATTCAAAGGT 58.934 47.619 23.77 6.51 37.67 3.50
6480 7767 2.440409 CACCCTGACAGGATTCAAAGG 58.560 52.381 23.77 5.83 37.67 3.11
6481 7768 1.815003 GCACCCTGACAGGATTCAAAG 59.185 52.381 23.77 6.59 37.67 2.77
6482 7769 1.425066 AGCACCCTGACAGGATTCAAA 59.575 47.619 23.77 0.00 37.67 2.69
6483 7770 1.067295 AGCACCCTGACAGGATTCAA 58.933 50.000 23.77 0.00 37.67 2.69
6484 7771 0.325933 CAGCACCCTGACAGGATTCA 59.674 55.000 23.77 0.00 41.77 2.57
6485 7772 1.028868 GCAGCACCCTGACAGGATTC 61.029 60.000 23.77 10.47 41.77 2.52
6486 7773 1.001641 GCAGCACCCTGACAGGATT 60.002 57.895 23.77 6.41 41.77 3.01
6487 7774 2.194388 CTGCAGCACCCTGACAGGAT 62.194 60.000 23.77 1.47 41.77 3.24
6488 7775 2.848679 TGCAGCACCCTGACAGGA 60.849 61.111 23.77 0.00 41.77 3.86
6489 7776 2.359602 CTGCAGCACCCTGACAGG 60.360 66.667 15.15 15.15 41.77 4.00
6490 7777 1.228063 AACTGCAGCACCCTGACAG 60.228 57.895 15.27 0.00 43.08 3.51
6491 7778 1.526686 CAACTGCAGCACCCTGACA 60.527 57.895 15.27 0.00 41.77 3.58
6492 7779 0.819259 TTCAACTGCAGCACCCTGAC 60.819 55.000 15.27 0.00 41.77 3.51
6493 7780 0.819259 GTTCAACTGCAGCACCCTGA 60.819 55.000 15.27 6.30 41.77 3.86
6494 7781 1.656441 GTTCAACTGCAGCACCCTG 59.344 57.895 15.27 3.85 42.13 4.45
6495 7782 1.529244 GGTTCAACTGCAGCACCCT 60.529 57.895 15.27 0.00 0.00 4.34
6496 7783 1.109323 AAGGTTCAACTGCAGCACCC 61.109 55.000 15.27 7.00 0.00 4.61
6497 7784 0.746659 AAAGGTTCAACTGCAGCACC 59.253 50.000 15.27 14.68 0.00 5.01
6498 7785 2.618709 AGTAAAGGTTCAACTGCAGCAC 59.381 45.455 15.27 5.49 0.00 4.40
6499 7786 2.930950 AGTAAAGGTTCAACTGCAGCA 58.069 42.857 15.27 0.00 0.00 4.41
6500 7787 4.201724 CGATAGTAAAGGTTCAACTGCAGC 60.202 45.833 15.27 0.00 0.00 5.25
6501 7788 5.168569 TCGATAGTAAAGGTTCAACTGCAG 58.831 41.667 13.48 13.48 37.40 4.41
6502 7789 5.142061 TCGATAGTAAAGGTTCAACTGCA 57.858 39.130 0.00 0.00 37.40 4.41
6503 7790 5.163884 GGTTCGATAGTAAAGGTTCAACTGC 60.164 44.000 0.00 0.00 37.40 4.40
6504 7791 5.929992 TGGTTCGATAGTAAAGGTTCAACTG 59.070 40.000 0.00 0.00 37.40 3.16
6505 7792 6.105397 TGGTTCGATAGTAAAGGTTCAACT 57.895 37.500 0.00 0.00 37.40 3.16
6506 7793 6.817140 AGATGGTTCGATAGTAAAGGTTCAAC 59.183 38.462 0.00 0.00 37.40 3.18
6507 7794 6.942976 AGATGGTTCGATAGTAAAGGTTCAA 58.057 36.000 0.00 0.00 37.40 2.69
6508 7795 6.540438 AGATGGTTCGATAGTAAAGGTTCA 57.460 37.500 0.00 0.00 37.40 3.18
6509 7796 9.543783 AATTAGATGGTTCGATAGTAAAGGTTC 57.456 33.333 0.00 0.00 37.40 3.62
6538 7825 3.079578 CAAGCAGAGAGATGGAAAGCAA 58.920 45.455 0.00 0.00 0.00 3.91
6658 7946 5.751243 TGTCAGAAAACAGAAGGCTTAAC 57.249 39.130 0.00 0.00 0.00 2.01
6661 7949 4.526970 TCTTGTCAGAAAACAGAAGGCTT 58.473 39.130 0.00 0.00 0.00 4.35
6662 7950 4.156455 TCTTGTCAGAAAACAGAAGGCT 57.844 40.909 0.00 0.00 0.00 4.58
6680 7969 6.784473 AGGGATGGATTTTTGAAGAACTTCTT 59.216 34.615 14.31 3.55 39.87 2.52
6715 8004 3.839353 ATCCCATAGCAGCGCCAGC 62.839 63.158 13.98 13.98 45.58 4.85
6716 8005 1.228063 AATCCCATAGCAGCGCCAG 60.228 57.895 2.29 0.00 0.00 4.85
6717 8006 1.526686 CAATCCCATAGCAGCGCCA 60.527 57.895 2.29 0.00 0.00 5.69
6719 8008 0.308993 GAACAATCCCATAGCAGCGC 59.691 55.000 0.00 0.00 0.00 5.92
6720 8009 1.959042 AGAACAATCCCATAGCAGCG 58.041 50.000 0.00 0.00 0.00 5.18
6747 8036 4.181578 CCAACCGAATCCTAACTGTACTG 58.818 47.826 0.00 0.00 0.00 2.74
6748 8037 3.836562 ACCAACCGAATCCTAACTGTACT 59.163 43.478 0.00 0.00 0.00 2.73
6751 8040 3.181448 ACAACCAACCGAATCCTAACTGT 60.181 43.478 0.00 0.00 0.00 3.55
6755 8044 2.372504 TGGACAACCAACCGAATCCTAA 59.627 45.455 0.00 0.00 43.91 2.69
6756 8045 1.979308 TGGACAACCAACCGAATCCTA 59.021 47.619 0.00 0.00 43.91 2.94
6757 8046 0.768622 TGGACAACCAACCGAATCCT 59.231 50.000 0.00 0.00 43.91 3.24
6758 8047 3.332706 TGGACAACCAACCGAATCC 57.667 52.632 0.00 0.00 43.91 3.01
6798 8099 3.191581 TGCAAACGAACTTTCCAAGTGAA 59.808 39.130 0.00 0.00 41.91 3.18
6808 8109 4.303282 ACAAACAAAGTGCAAACGAACTT 58.697 34.783 0.00 0.00 38.25 2.66
6809 8110 3.908213 ACAAACAAAGTGCAAACGAACT 58.092 36.364 0.00 0.00 0.00 3.01
6810 8111 3.917985 AGACAAACAAAGTGCAAACGAAC 59.082 39.130 0.00 0.00 0.00 3.95
6811 8112 4.167554 AGACAAACAAAGTGCAAACGAA 57.832 36.364 0.00 0.00 0.00 3.85
6813 8114 3.303229 GGAAGACAAACAAAGTGCAAACG 59.697 43.478 0.00 0.00 0.00 3.60
6814 8115 4.241681 TGGAAGACAAACAAAGTGCAAAC 58.758 39.130 0.00 0.00 0.00 2.93
6817 8118 4.527509 TTTGGAAGACAAACAAAGTGCA 57.472 36.364 0.00 0.00 43.81 4.57
6831 8132 7.427214 TGTAACCGTTTCCTTAAATTTGGAAG 58.573 34.615 9.29 2.70 42.46 3.46
6833 8134 6.771749 TCTGTAACCGTTTCCTTAAATTTGGA 59.228 34.615 0.00 0.00 0.00 3.53
6835 8136 7.916450 TGTTCTGTAACCGTTTCCTTAAATTTG 59.084 33.333 0.00 0.00 34.49 2.32
6836 8137 7.998580 TGTTCTGTAACCGTTTCCTTAAATTT 58.001 30.769 0.00 0.00 34.49 1.82
6838 8139 7.255346 CCTTGTTCTGTAACCGTTTCCTTAAAT 60.255 37.037 0.00 0.00 34.49 1.40
6839 8140 6.038492 CCTTGTTCTGTAACCGTTTCCTTAAA 59.962 38.462 0.00 0.00 34.49 1.52
6840 8141 5.528320 CCTTGTTCTGTAACCGTTTCCTTAA 59.472 40.000 0.00 0.00 34.49 1.85
6841 8142 5.058490 CCTTGTTCTGTAACCGTTTCCTTA 58.942 41.667 0.00 0.00 34.49 2.69
6843 8144 3.135167 TCCTTGTTCTGTAACCGTTTCCT 59.865 43.478 0.00 0.00 34.49 3.36
6845 8146 5.488645 TTTCCTTGTTCTGTAACCGTTTC 57.511 39.130 0.00 0.00 34.49 2.78
6847 8148 5.008316 GTGATTTCCTTGTTCTGTAACCGTT 59.992 40.000 0.00 0.00 34.49 4.44
6849 8150 4.513692 TGTGATTTCCTTGTTCTGTAACCG 59.486 41.667 0.00 0.00 34.49 4.44
6850 8151 5.531287 ACTGTGATTTCCTTGTTCTGTAACC 59.469 40.000 0.00 0.00 34.49 2.85
6852 8153 6.353323 TCACTGTGATTTCCTTGTTCTGTAA 58.647 36.000 6.36 0.00 0.00 2.41
6854 8155 4.780815 TCACTGTGATTTCCTTGTTCTGT 58.219 39.130 6.36 0.00 0.00 3.41
6855 8156 5.297776 ACTTCACTGTGATTTCCTTGTTCTG 59.702 40.000 11.86 0.00 0.00 3.02
6856 8157 5.297776 CACTTCACTGTGATTTCCTTGTTCT 59.702 40.000 11.86 0.00 40.12 3.01
6857 8158 5.506317 CCACTTCACTGTGATTTCCTTGTTC 60.506 44.000 11.86 0.00 40.12 3.18
6858 8159 4.339247 CCACTTCACTGTGATTTCCTTGTT 59.661 41.667 11.86 0.00 40.12 2.83
6859 8160 3.885297 CCACTTCACTGTGATTTCCTTGT 59.115 43.478 11.86 0.38 40.12 3.16
6860 8161 3.885297 ACCACTTCACTGTGATTTCCTTG 59.115 43.478 11.86 3.17 40.12 3.61
6861 8162 4.170468 ACCACTTCACTGTGATTTCCTT 57.830 40.909 11.86 0.00 40.12 3.36
6862 8163 3.864789 ACCACTTCACTGTGATTTCCT 57.135 42.857 11.86 0.00 40.12 3.36
6863 8164 4.142600 GCATACCACTTCACTGTGATTTCC 60.143 45.833 11.86 0.00 40.12 3.13
6864 8165 4.455533 TGCATACCACTTCACTGTGATTTC 59.544 41.667 11.86 0.00 40.12 2.17
6865 8166 4.397420 TGCATACCACTTCACTGTGATTT 58.603 39.130 11.86 0.00 40.12 2.17
6866 8167 4.005650 CTGCATACCACTTCACTGTGATT 58.994 43.478 11.86 0.00 40.12 2.57
6867 8168 3.603532 CTGCATACCACTTCACTGTGAT 58.396 45.455 11.86 0.00 40.12 3.06
6868 8169 2.871637 GCTGCATACCACTTCACTGTGA 60.872 50.000 6.36 6.36 40.12 3.58
6869 8170 1.466167 GCTGCATACCACTTCACTGTG 59.534 52.381 0.17 0.17 37.66 3.66
6870 8171 1.611673 GGCTGCATACCACTTCACTGT 60.612 52.381 0.50 0.00 0.00 3.55
6871 8172 1.089920 GGCTGCATACCACTTCACTG 58.910 55.000 0.50 0.00 0.00 3.66
6872 8173 0.692476 TGGCTGCATACCACTTCACT 59.308 50.000 4.53 0.00 30.29 3.41
6873 8174 1.672881 GATGGCTGCATACCACTTCAC 59.327 52.381 10.58 0.00 40.82 3.18
6874 8175 1.281577 TGATGGCTGCATACCACTTCA 59.718 47.619 10.58 8.95 40.82 3.02
6875 8176 2.042686 TGATGGCTGCATACCACTTC 57.957 50.000 10.58 6.65 40.82 3.01
6876 8177 2.094675 GTTGATGGCTGCATACCACTT 58.905 47.619 10.58 0.00 40.82 3.16
6877 8178 1.755179 GTTGATGGCTGCATACCACT 58.245 50.000 10.58 1.54 40.82 4.00
6878 8179 0.378257 CGTTGATGGCTGCATACCAC 59.622 55.000 10.58 6.24 40.82 4.16
6879 8180 1.375853 GCGTTGATGGCTGCATACCA 61.376 55.000 10.75 10.75 42.61 3.25
6880 8181 1.356624 GCGTTGATGGCTGCATACC 59.643 57.895 0.50 0.00 0.00 2.73
6881 8182 0.451383 TTGCGTTGATGGCTGCATAC 59.549 50.000 0.50 0.00 37.17 2.39
6882 8183 0.734309 CTTGCGTTGATGGCTGCATA 59.266 50.000 0.50 0.00 37.17 3.14
6883 8184 1.509463 CTTGCGTTGATGGCTGCAT 59.491 52.632 0.50 0.00 37.17 3.96
6884 8185 2.628696 CCTTGCGTTGATGGCTGCA 61.629 57.895 0.50 0.00 35.15 4.41
6885 8186 1.865788 TTCCTTGCGTTGATGGCTGC 61.866 55.000 0.00 0.00 0.00 5.25
6886 8187 0.169672 CTTCCTTGCGTTGATGGCTG 59.830 55.000 0.00 0.00 0.00 4.85
6887 8188 0.036732 TCTTCCTTGCGTTGATGGCT 59.963 50.000 0.00 0.00 0.00 4.75
6888 8189 0.449388 CTCTTCCTTGCGTTGATGGC 59.551 55.000 0.00 0.00 0.00 4.40
6889 8190 1.813513 ACTCTTCCTTGCGTTGATGG 58.186 50.000 0.00 0.00 0.00 3.51
6890 8191 3.250762 TCAAACTCTTCCTTGCGTTGATG 59.749 43.478 0.00 0.00 0.00 3.07
6891 8192 3.251004 GTCAAACTCTTCCTTGCGTTGAT 59.749 43.478 0.00 0.00 0.00 2.57
6892 8193 2.612212 GTCAAACTCTTCCTTGCGTTGA 59.388 45.455 0.00 0.00 0.00 3.18
6893 8194 2.287009 GGTCAAACTCTTCCTTGCGTTG 60.287 50.000 0.00 0.00 0.00 4.10
6894 8195 1.947456 GGTCAAACTCTTCCTTGCGTT 59.053 47.619 0.00 0.00 0.00 4.84
6895 8196 1.594331 GGTCAAACTCTTCCTTGCGT 58.406 50.000 0.00 0.00 0.00 5.24
6896 8197 0.875059 GGGTCAAACTCTTCCTTGCG 59.125 55.000 0.00 0.00 0.00 4.85
6897 8198 2.278332 AGGGTCAAACTCTTCCTTGC 57.722 50.000 0.00 0.00 0.00 4.01
6898 8199 3.691609 GCATAGGGTCAAACTCTTCCTTG 59.308 47.826 0.00 0.00 27.79 3.61
6899 8200 3.589288 AGCATAGGGTCAAACTCTTCCTT 59.411 43.478 0.00 0.00 27.79 3.36
6900 8201 3.185455 AGCATAGGGTCAAACTCTTCCT 58.815 45.455 0.00 0.00 27.79 3.36
6901 8202 3.636153 AGCATAGGGTCAAACTCTTCC 57.364 47.619 0.00 0.00 27.79 3.46
6902 8203 4.579869 TCAAGCATAGGGTCAAACTCTTC 58.420 43.478 0.00 0.00 27.79 2.87
6903 8204 4.640771 TCAAGCATAGGGTCAAACTCTT 57.359 40.909 0.00 0.00 27.79 2.85
6904 8205 4.640771 TTCAAGCATAGGGTCAAACTCT 57.359 40.909 0.00 0.00 31.14 3.24
6905 8206 5.297029 GGTATTCAAGCATAGGGTCAAACTC 59.703 44.000 0.00 0.00 0.00 3.01
6906 8207 5.193679 GGTATTCAAGCATAGGGTCAAACT 58.806 41.667 0.00 0.00 0.00 2.66
6907 8208 4.947388 TGGTATTCAAGCATAGGGTCAAAC 59.053 41.667 0.00 0.00 0.00 2.93
6908 8209 5.186256 TGGTATTCAAGCATAGGGTCAAA 57.814 39.130 0.00 0.00 0.00 2.69
6909 8210 4.853468 TGGTATTCAAGCATAGGGTCAA 57.147 40.909 0.00 0.00 0.00 3.18
6910 8211 4.853468 TTGGTATTCAAGCATAGGGTCA 57.147 40.909 0.00 0.00 35.03 4.02
6911 8212 6.321181 TCAAATTGGTATTCAAGCATAGGGTC 59.679 38.462 0.00 0.00 38.95 4.46
6912 8213 6.194235 TCAAATTGGTATTCAAGCATAGGGT 58.806 36.000 0.00 0.00 38.95 4.34
6913 8214 6.713762 TCAAATTGGTATTCAAGCATAGGG 57.286 37.500 0.00 0.00 38.95 3.53
6914 8215 8.636213 AGAATCAAATTGGTATTCAAGCATAGG 58.364 33.333 9.20 0.00 38.95 2.57
6917 8218 9.374838 GAAAGAATCAAATTGGTATTCAAGCAT 57.625 29.630 9.20 0.00 38.95 3.79
6918 8219 8.587608 AGAAAGAATCAAATTGGTATTCAAGCA 58.412 29.630 9.20 0.00 38.95 3.91
6919 8220 8.992835 AGAAAGAATCAAATTGGTATTCAAGC 57.007 30.769 9.20 0.53 38.95 4.01
6933 8234 9.521503 CAATCGTCTACATAGAGAAAGAATCAA 57.478 33.333 0.00 0.00 32.01 2.57
6934 8235 8.903820 TCAATCGTCTACATAGAGAAAGAATCA 58.096 33.333 0.00 0.00 32.01 2.57
6935 8236 9.393249 CTCAATCGTCTACATAGAGAAAGAATC 57.607 37.037 0.00 0.00 32.01 2.52
6936 8237 8.356657 CCTCAATCGTCTACATAGAGAAAGAAT 58.643 37.037 0.00 0.00 32.01 2.40
6937 8238 7.556635 TCCTCAATCGTCTACATAGAGAAAGAA 59.443 37.037 0.00 0.00 32.01 2.52
6938 8239 7.054751 TCCTCAATCGTCTACATAGAGAAAGA 58.945 38.462 0.00 0.00 32.01 2.52
6939 8240 7.265647 TCCTCAATCGTCTACATAGAGAAAG 57.734 40.000 0.00 0.00 32.01 2.62
6940 8241 7.825331 ATCCTCAATCGTCTACATAGAGAAA 57.175 36.000 0.00 0.00 32.01 2.52
6941 8242 7.825331 AATCCTCAATCGTCTACATAGAGAA 57.175 36.000 0.00 0.00 32.01 2.87
6942 8243 7.255625 CCAAATCCTCAATCGTCTACATAGAGA 60.256 40.741 0.00 0.00 32.01 3.10
6943 8244 6.865726 CCAAATCCTCAATCGTCTACATAGAG 59.134 42.308 0.00 0.00 32.01 2.43
6944 8245 6.738731 GCCAAATCCTCAATCGTCTACATAGA 60.739 42.308 0.00 0.00 0.00 1.98
6945 8246 5.406780 GCCAAATCCTCAATCGTCTACATAG 59.593 44.000 0.00 0.00 0.00 2.23
6946 8247 5.163353 TGCCAAATCCTCAATCGTCTACATA 60.163 40.000 0.00 0.00 0.00 2.29
6947 8248 4.130118 GCCAAATCCTCAATCGTCTACAT 58.870 43.478 0.00 0.00 0.00 2.29
6948 8249 3.055458 TGCCAAATCCTCAATCGTCTACA 60.055 43.478 0.00 0.00 0.00 2.74
6949 8250 3.531538 TGCCAAATCCTCAATCGTCTAC 58.468 45.455 0.00 0.00 0.00 2.59
6950 8251 3.197766 ACTGCCAAATCCTCAATCGTCTA 59.802 43.478 0.00 0.00 0.00 2.59
6951 8252 2.026822 ACTGCCAAATCCTCAATCGTCT 60.027 45.455 0.00 0.00 0.00 4.18
6952 8253 2.096496 CACTGCCAAATCCTCAATCGTC 59.904 50.000 0.00 0.00 0.00 4.20
6953 8254 2.086869 CACTGCCAAATCCTCAATCGT 58.913 47.619 0.00 0.00 0.00 3.73
6954 8255 2.086869 ACACTGCCAAATCCTCAATCG 58.913 47.619 0.00 0.00 0.00 3.34
6955 8256 3.507233 TGAACACTGCCAAATCCTCAATC 59.493 43.478 0.00 0.00 0.00 2.67
6956 8257 3.499338 TGAACACTGCCAAATCCTCAAT 58.501 40.909 0.00 0.00 0.00 2.57
6957 8258 2.942804 TGAACACTGCCAAATCCTCAA 58.057 42.857 0.00 0.00 0.00 3.02
6958 8259 2.655090 TGAACACTGCCAAATCCTCA 57.345 45.000 0.00 0.00 0.00 3.86
6959 8260 2.229784 CCTTGAACACTGCCAAATCCTC 59.770 50.000 0.00 0.00 0.00 3.71
6960 8261 2.158475 TCCTTGAACACTGCCAAATCCT 60.158 45.455 0.00 0.00 0.00 3.24
6961 8262 2.229784 CTCCTTGAACACTGCCAAATCC 59.770 50.000 0.00 0.00 0.00 3.01
6962 8263 2.229784 CCTCCTTGAACACTGCCAAATC 59.770 50.000 0.00 0.00 0.00 2.17
6963 8264 2.242043 CCTCCTTGAACACTGCCAAAT 58.758 47.619 0.00 0.00 0.00 2.32
6964 8265 1.691196 CCTCCTTGAACACTGCCAAA 58.309 50.000 0.00 0.00 0.00 3.28
6965 8266 0.823356 GCCTCCTTGAACACTGCCAA 60.823 55.000 0.00 0.00 0.00 4.52
6966 8267 1.228245 GCCTCCTTGAACACTGCCA 60.228 57.895 0.00 0.00 0.00 4.92
6967 8268 1.228245 TGCCTCCTTGAACACTGCC 60.228 57.895 0.00 0.00 0.00 4.85
6968 8269 1.239968 CCTGCCTCCTTGAACACTGC 61.240 60.000 0.00 0.00 0.00 4.40
6969 8270 0.607489 CCCTGCCTCCTTGAACACTG 60.607 60.000 0.00 0.00 0.00 3.66
6970 8271 1.763770 CCCTGCCTCCTTGAACACT 59.236 57.895 0.00 0.00 0.00 3.55
6971 8272 1.973812 GCCCTGCCTCCTTGAACAC 60.974 63.158 0.00 0.00 0.00 3.32
6972 8273 2.005606 TTGCCCTGCCTCCTTGAACA 62.006 55.000 0.00 0.00 0.00 3.18
6973 8274 0.827507 TTTGCCCTGCCTCCTTGAAC 60.828 55.000 0.00 0.00 0.00 3.18
6974 8275 0.105760 TTTTGCCCTGCCTCCTTGAA 60.106 50.000 0.00 0.00 0.00 2.69
6975 8276 0.105760 TTTTTGCCCTGCCTCCTTGA 60.106 50.000 0.00 0.00 0.00 3.02
6976 8277 2.439837 TTTTTGCCCTGCCTCCTTG 58.560 52.632 0.00 0.00 0.00 3.61
6992 8293 5.312895 GCCACACCCCAAAGATTAATTTTT 58.687 37.500 0.00 0.00 0.00 1.94
6993 8294 4.263287 GGCCACACCCCAAAGATTAATTTT 60.263 41.667 0.00 0.00 0.00 1.82
6994 8295 3.263170 GGCCACACCCCAAAGATTAATTT 59.737 43.478 0.00 0.00 0.00 1.82
6995 8296 2.837591 GGCCACACCCCAAAGATTAATT 59.162 45.455 0.00 0.00 0.00 1.40
6996 8297 2.466846 GGCCACACCCCAAAGATTAAT 58.533 47.619 0.00 0.00 0.00 1.40
6997 8298 1.888826 CGGCCACACCCCAAAGATTAA 60.889 52.381 2.24 0.00 33.26 1.40
6998 8299 0.322997 CGGCCACACCCCAAAGATTA 60.323 55.000 2.24 0.00 33.26 1.75
6999 8300 1.606313 CGGCCACACCCCAAAGATT 60.606 57.895 2.24 0.00 33.26 2.40
7000 8301 2.035626 CGGCCACACCCCAAAGAT 59.964 61.111 2.24 0.00 33.26 2.40
7001 8302 2.285889 TTTCGGCCACACCCCAAAGA 62.286 55.000 2.24 0.00 33.26 2.52
7002 8303 1.805428 CTTTCGGCCACACCCCAAAG 61.805 60.000 2.24 0.00 33.26 2.77
7003 8304 1.830408 CTTTCGGCCACACCCCAAA 60.830 57.895 2.24 0.00 33.26 3.28
7004 8305 2.203422 CTTTCGGCCACACCCCAA 60.203 61.111 2.24 0.00 33.26 4.12
7005 8306 3.063197 AACTTTCGGCCACACCCCA 62.063 57.895 2.24 0.00 33.26 4.96
7006 8307 2.203437 AACTTTCGGCCACACCCC 60.203 61.111 2.24 0.00 33.26 4.95
7007 8308 1.826487 ACAACTTTCGGCCACACCC 60.826 57.895 2.24 0.00 33.26 4.61
7008 8309 1.358759 CACAACTTTCGGCCACACC 59.641 57.895 2.24 0.00 0.00 4.16
7009 8310 0.248458 CACACAACTTTCGGCCACAC 60.248 55.000 2.24 0.00 0.00 3.82
7010 8311 1.999071 GCACACAACTTTCGGCCACA 61.999 55.000 2.24 0.00 0.00 4.17
7011 8312 1.299089 GCACACAACTTTCGGCCAC 60.299 57.895 2.24 0.00 0.00 5.01
7012 8313 1.315981 TTGCACACAACTTTCGGCCA 61.316 50.000 2.24 0.00 0.00 5.36
7013 8314 0.179124 TTTGCACACAACTTTCGGCC 60.179 50.000 0.00 0.00 34.87 6.13
7014 8315 1.199624 CTTTGCACACAACTTTCGGC 58.800 50.000 0.00 0.00 34.87 5.54
7015 8316 2.097466 ACTCTTTGCACACAACTTTCGG 59.903 45.455 0.00 0.00 34.87 4.30
7016 8317 3.100817 CACTCTTTGCACACAACTTTCG 58.899 45.455 0.00 0.00 34.87 3.46
7017 8318 4.096732 ACACTCTTTGCACACAACTTTC 57.903 40.909 0.00 0.00 34.87 2.62
7018 8319 4.236935 CAACACTCTTTGCACACAACTTT 58.763 39.130 0.00 0.00 34.87 2.66
7019 8320 3.367292 CCAACACTCTTTGCACACAACTT 60.367 43.478 0.00 0.00 34.87 2.66
7020 8321 2.164219 CCAACACTCTTTGCACACAACT 59.836 45.455 0.00 0.00 34.87 3.16
7021 8322 2.529151 CCAACACTCTTTGCACACAAC 58.471 47.619 0.00 0.00 34.87 3.32
7022 8323 1.135141 GCCAACACTCTTTGCACACAA 60.135 47.619 0.00 0.00 0.00 3.33
7023 8324 0.455410 GCCAACACTCTTTGCACACA 59.545 50.000 0.00 0.00 0.00 3.72
7024 8325 0.592247 CGCCAACACTCTTTGCACAC 60.592 55.000 0.00 0.00 0.00 3.82
7025 8326 0.746204 TCGCCAACACTCTTTGCACA 60.746 50.000 0.00 0.00 0.00 4.57
7026 8327 0.317020 GTCGCCAACACTCTTTGCAC 60.317 55.000 0.00 0.00 0.00 4.57
7027 8328 0.746204 TGTCGCCAACACTCTTTGCA 60.746 50.000 0.00 0.00 31.20 4.08
7028 8329 0.380378 TTGTCGCCAACACTCTTTGC 59.620 50.000 0.00 0.00 37.70 3.68
7029 8330 2.290367 TCATTGTCGCCAACACTCTTTG 59.710 45.455 0.00 0.00 37.70 2.77
7030 8331 2.571212 TCATTGTCGCCAACACTCTTT 58.429 42.857 0.00 0.00 37.70 2.52
7031 8332 2.254546 TCATTGTCGCCAACACTCTT 57.745 45.000 0.00 0.00 37.70 2.85
7032 8333 2.254546 TTCATTGTCGCCAACACTCT 57.745 45.000 0.00 0.00 37.70 3.24
7033 8334 2.548057 TCTTTCATTGTCGCCAACACTC 59.452 45.455 0.00 0.00 37.70 3.51
7034 8335 2.571212 TCTTTCATTGTCGCCAACACT 58.429 42.857 0.00 0.00 37.70 3.55
7035 8336 3.236816 CATCTTTCATTGTCGCCAACAC 58.763 45.455 0.00 0.00 37.70 3.32
7036 8337 2.884012 ACATCTTTCATTGTCGCCAACA 59.116 40.909 0.00 0.00 35.59 3.33
7037 8338 3.559238 ACATCTTTCATTGTCGCCAAC 57.441 42.857 0.00 0.00 32.26 3.77
7038 8339 3.305267 CCAACATCTTTCATTGTCGCCAA 60.305 43.478 0.00 0.00 34.45 4.52
7039 8340 2.228582 CCAACATCTTTCATTGTCGCCA 59.771 45.455 0.00 0.00 0.00 5.69
7040 8341 2.415893 CCCAACATCTTTCATTGTCGCC 60.416 50.000 0.00 0.00 0.00 5.54
7041 8342 2.415893 CCCCAACATCTTTCATTGTCGC 60.416 50.000 0.00 0.00 0.00 5.19
7042 8343 2.415893 GCCCCAACATCTTTCATTGTCG 60.416 50.000 0.00 0.00 0.00 4.35
7043 8344 2.827921 AGCCCCAACATCTTTCATTGTC 59.172 45.455 0.00 0.00 0.00 3.18
7044 8345 2.564062 CAGCCCCAACATCTTTCATTGT 59.436 45.455 0.00 0.00 0.00 2.71
7045 8346 2.675889 GCAGCCCCAACATCTTTCATTG 60.676 50.000 0.00 0.00 0.00 2.82
7046 8347 1.551883 GCAGCCCCAACATCTTTCATT 59.448 47.619 0.00 0.00 0.00 2.57
7047 8348 1.188863 GCAGCCCCAACATCTTTCAT 58.811 50.000 0.00 0.00 0.00 2.57
7048 8349 0.178967 TGCAGCCCCAACATCTTTCA 60.179 50.000 0.00 0.00 0.00 2.69
7049 8350 1.188863 ATGCAGCCCCAACATCTTTC 58.811 50.000 0.00 0.00 0.00 2.62
7139 8660 2.434702 AGGAGAAACTCTGGTTCGTTGT 59.565 45.455 0.00 0.00 34.14 3.32
7173 8710 3.960755 TGTCACAGTTCTTCCTCTTCTCA 59.039 43.478 0.00 0.00 0.00 3.27
7198 8735 3.961480 AGGCATTAAAAGAGCAAACCC 57.039 42.857 0.00 0.00 0.00 4.11
7275 8841 1.928503 CGCGTCAAAATACCATACCGT 59.071 47.619 0.00 0.00 0.00 4.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.