Multiple sequence alignment - TraesCS3A01G187900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G187900 chr3A 100.000 4217 0 0 1 4217 227363740 227367956 0.000000e+00 7788.0
1 TraesCS3A01G187900 chr3A 93.781 611 35 3 1 609 181139041 181138432 0.000000e+00 915.0
2 TraesCS3A01G187900 chr3A 92.308 611 45 1 1 609 742380088 742380698 0.000000e+00 867.0
3 TraesCS3A01G187900 chr3A 88.983 118 8 4 611 725 476320046 476319931 1.580000e-29 141.0
4 TraesCS3A01G187900 chr3A 90.588 85 8 0 2012 2096 227366068 227366152 3.450000e-21 113.0
5 TraesCS3A01G187900 chr3D 92.218 1632 60 31 1870 3464 181655478 181653877 0.000000e+00 2248.0
6 TraesCS3A01G187900 chr3D 91.129 496 27 11 940 1423 181656749 181656259 0.000000e+00 656.0
7 TraesCS3A01G187900 chr3D 91.915 470 32 5 1412 1878 181656049 181655583 0.000000e+00 652.0
8 TraesCS3A01G187900 chr3D 92.035 339 20 7 2872 3209 327310521 327310853 1.780000e-128 470.0
9 TraesCS3A01G187900 chr3D 84.293 382 44 12 3842 4217 181653163 181652792 4.010000e-95 359.0
10 TraesCS3A01G187900 chr3D 92.000 100 7 1 2008 2107 181654989 181654891 5.690000e-29 139.0
11 TraesCS3A01G187900 chr3D 98.000 50 0 1 795 844 181657326 181657278 7.510000e-13 86.1
12 TraesCS3A01G187900 chr3B 91.835 1335 48 37 2050 3351 259911328 259910022 0.000000e+00 1805.0
13 TraesCS3A01G187900 chr3B 92.000 1100 63 18 795 1878 259912645 259911555 0.000000e+00 1520.0
14 TraesCS3A01G187900 chr3B 90.613 1044 65 19 2299 3327 12172832 12173857 0.000000e+00 1354.0
15 TraesCS3A01G187900 chr3B 87.333 450 32 10 2178 2608 365739111 365738668 3.790000e-135 492.0
16 TraesCS3A01G187900 chr3B 80.153 393 40 17 3660 4028 259909472 259909094 4.180000e-65 259.0
17 TraesCS3A01G187900 chr3B 92.126 127 10 0 1884 2010 259911454 259911328 3.350000e-41 180.0
18 TraesCS3A01G187900 chr3B 94.624 93 5 0 2089 2181 365739232 365739140 1.220000e-30 145.0
19 TraesCS3A01G187900 chr3B 92.000 100 7 1 2008 2107 259911025 259910927 5.690000e-29 139.0
20 TraesCS3A01G187900 chr3B 100.000 61 0 0 1748 1808 365739292 365739232 3.450000e-21 113.0
21 TraesCS3A01G187900 chr4B 88.744 1226 92 24 2178 3372 333373004 333374214 0.000000e+00 1458.0
22 TraesCS3A01G187900 chr4B 90.553 434 29 2 1748 2181 333372554 333372975 7.920000e-157 564.0
23 TraesCS3A01G187900 chr2B 89.484 989 61 24 2491 3464 380575173 380574213 0.000000e+00 1210.0
24 TraesCS3A01G187900 chr2B 82.090 134 16 6 610 741 734915356 734915483 1.600000e-19 108.0
25 TraesCS3A01G187900 chr2B 88.312 77 7 2 647 722 387625328 387625253 1.610000e-14 91.6
26 TraesCS3A01G187900 chr5A 93.290 611 39 1 1 609 568331705 568332315 0.000000e+00 900.0
27 TraesCS3A01G187900 chr5A 90.725 345 25 4 2299 2642 116202828 116203166 1.790000e-123 453.0
28 TraesCS3A01G187900 chr4A 93.126 611 40 1 1 609 574836532 574837142 0.000000e+00 894.0
29 TraesCS3A01G187900 chr4A 92.951 610 40 2 1 608 518971808 518972416 0.000000e+00 885.0
30 TraesCS3A01G187900 chr4A 91.898 432 22 3 1751 2181 610428367 610427948 3.630000e-165 592.0
31 TraesCS3A01G187900 chr4A 89.976 419 34 6 2178 2594 610427919 610427507 6.210000e-148 534.0
32 TraesCS3A01G187900 chr4A 87.528 449 33 10 2178 2608 555159120 555159563 8.140000e-137 497.0
33 TraesCS3A01G187900 chr4A 90.332 331 26 6 2880 3209 306062229 306061904 3.010000e-116 429.0
34 TraesCS3A01G187900 chr4A 95.699 93 4 0 2089 2181 555158999 555159091 2.630000e-32 150.0
35 TraesCS3A01G187900 chr2A 92.635 611 43 1 1 609 234080655 234080045 0.000000e+00 878.0
36 TraesCS3A01G187900 chr2A 89.402 368 27 2 1748 2115 132706370 132706725 1.790000e-123 453.0
37 TraesCS3A01G187900 chr1A 92.122 622 44 4 1 617 14151137 14151758 0.000000e+00 872.0
38 TraesCS3A01G187900 chr1A 91.935 620 47 2 1 618 577832065 577831447 0.000000e+00 865.0
39 TraesCS3A01G187900 chr1A 91.922 619 47 2 1 617 317819446 317820063 0.000000e+00 863.0
40 TraesCS3A01G187900 chr1A 88.710 434 37 2 1748 2181 37396706 37397127 1.740000e-143 520.0
41 TraesCS3A01G187900 chr1A 86.444 450 35 7 2178 2608 37397156 37397598 1.780000e-128 470.0
42 TraesCS3A01G187900 chr1A 90.265 113 11 0 1194 1306 498809557 498809669 9.450000e-32 148.0
43 TraesCS3A01G187900 chr1A 89.381 113 10 2 1195 1306 579762853 579762964 1.580000e-29 141.0
44 TraesCS3A01G187900 chr1B 89.756 615 39 15 2852 3464 77723685 77724277 0.000000e+00 765.0
45 TraesCS3A01G187900 chr1B 96.739 92 2 1 1748 1839 122829976 122830066 7.300000e-33 152.0
46 TraesCS3A01G187900 chr1B 95.604 91 4 0 1749 1839 79979468 79979558 3.400000e-31 147.0
47 TraesCS3A01G187900 chrUn 89.087 449 26 8 2178 2608 114953637 114954080 1.730000e-148 536.0
48 TraesCS3A01G187900 chrUn 96.774 93 3 0 2089 2181 114953516 114953608 5.650000e-34 156.0
49 TraesCS3A01G187900 chr7B 90.560 339 26 6 2872 3209 699508171 699508504 1.080000e-120 444.0
50 TraesCS3A01G187900 chr7B 90.265 113 11 0 1194 1306 666503232 666503344 9.450000e-32 148.0
51 TraesCS3A01G187900 chr7B 82.906 117 13 5 610 724 195144082 195144193 9.650000e-17 99.0
52 TraesCS3A01G187900 chr6A 94.068 118 4 3 610 724 384451358 384451475 4.330000e-40 176.0
53 TraesCS3A01G187900 chr5D 92.241 116 5 3 611 724 110808844 110808957 1.210000e-35 161.0
54 TraesCS3A01G187900 chr5D 87.879 66 7 1 637 702 67921303 67921367 4.520000e-10 76.8
55 TraesCS3A01G187900 chr5D 86.364 66 8 1 637 702 67874474 67874538 2.100000e-08 71.3
56 TraesCS3A01G187900 chr1D 91.150 113 10 0 1194 1306 403563415 403563527 2.030000e-33 154.0
57 TraesCS3A01G187900 chr7D 90.265 113 11 0 1194 1306 591005360 591005472 9.450000e-32 148.0
58 TraesCS3A01G187900 chr5B 89.381 113 12 0 1194 1306 624163608 624163496 4.400000e-30 143.0
59 TraesCS3A01G187900 chr5B 89.381 113 12 0 1194 1306 627763539 627763427 4.400000e-30 143.0
60 TraesCS3A01G187900 chr5B 94.737 38 2 0 2022 2059 38047235 38047198 4.550000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G187900 chr3A 227363740 227367956 4216 False 3950.500000 7788 95.294000 1 4217 2 chr3A.!!$F2 4216
1 TraesCS3A01G187900 chr3A 181138432 181139041 609 True 915.000000 915 93.781000 1 609 1 chr3A.!!$R1 608
2 TraesCS3A01G187900 chr3A 742380088 742380698 610 False 867.000000 867 92.308000 1 609 1 chr3A.!!$F1 608
3 TraesCS3A01G187900 chr3D 181652792 181657326 4534 True 690.016667 2248 91.592500 795 4217 6 chr3D.!!$R1 3422
4 TraesCS3A01G187900 chr3B 12172832 12173857 1025 False 1354.000000 1354 90.613000 2299 3327 1 chr3B.!!$F1 1028
5 TraesCS3A01G187900 chr3B 259909094 259912645 3551 True 780.600000 1805 89.622800 795 4028 5 chr3B.!!$R1 3233
6 TraesCS3A01G187900 chr3B 365738668 365739292 624 True 250.000000 492 93.985667 1748 2608 3 chr3B.!!$R2 860
7 TraesCS3A01G187900 chr4B 333372554 333374214 1660 False 1011.000000 1458 89.648500 1748 3372 2 chr4B.!!$F1 1624
8 TraesCS3A01G187900 chr2B 380574213 380575173 960 True 1210.000000 1210 89.484000 2491 3464 1 chr2B.!!$R1 973
9 TraesCS3A01G187900 chr5A 568331705 568332315 610 False 900.000000 900 93.290000 1 609 1 chr5A.!!$F2 608
10 TraesCS3A01G187900 chr4A 574836532 574837142 610 False 894.000000 894 93.126000 1 609 1 chr4A.!!$F2 608
11 TraesCS3A01G187900 chr4A 518971808 518972416 608 False 885.000000 885 92.951000 1 608 1 chr4A.!!$F1 607
12 TraesCS3A01G187900 chr4A 610427507 610428367 860 True 563.000000 592 90.937000 1751 2594 2 chr4A.!!$R2 843
13 TraesCS3A01G187900 chr4A 555158999 555159563 564 False 323.500000 497 91.613500 2089 2608 2 chr4A.!!$F3 519
14 TraesCS3A01G187900 chr2A 234080045 234080655 610 True 878.000000 878 92.635000 1 609 1 chr2A.!!$R1 608
15 TraesCS3A01G187900 chr1A 14151137 14151758 621 False 872.000000 872 92.122000 1 617 1 chr1A.!!$F1 616
16 TraesCS3A01G187900 chr1A 577831447 577832065 618 True 865.000000 865 91.935000 1 618 1 chr1A.!!$R1 617
17 TraesCS3A01G187900 chr1A 317819446 317820063 617 False 863.000000 863 91.922000 1 617 1 chr1A.!!$F2 616
18 TraesCS3A01G187900 chr1A 37396706 37397598 892 False 495.000000 520 87.577000 1748 2608 2 chr1A.!!$F5 860
19 TraesCS3A01G187900 chr1B 77723685 77724277 592 False 765.000000 765 89.756000 2852 3464 1 chr1B.!!$F1 612
20 TraesCS3A01G187900 chrUn 114953516 114954080 564 False 346.000000 536 92.930500 2089 2608 2 chrUn.!!$F1 519

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
735 738 0.179097 GAGCTCCCGATCCACTCAAC 60.179 60.0 0.87 0.0 0.0 3.18 F
1123 1584 0.106719 TTTCCTGATCCCGCCATTCC 60.107 55.0 0.00 0.0 0.0 3.01 F
1567 2258 0.381089 GGATCTCATTGCTGCTGTGC 59.619 55.0 0.00 0.0 0.0 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2421 3428 0.253044 TGTGCAATGGCTAGGAGGAC 59.747 55.000 0.0 0.0 41.91 3.85 R
2530 3537 3.376540 GTGAAATTGCTGTTACGCCAAA 58.623 40.909 0.0 0.0 0.00 3.28 R
3490 4515 0.179062 CTACTCTGCACATCCAGGCC 60.179 60.000 0.0 0.0 33.64 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
116 117 1.540707 CAGTTGCCATGTACATGCACA 59.459 47.619 27.27 23.21 37.49 4.57
161 162 3.254411 TGCAAAAACATATGGCAACTCGA 59.746 39.130 7.80 0.00 37.61 4.04
281 282 7.047891 CACCTGATTATAAAAGCACACTAGGA 58.952 38.462 0.00 0.00 0.00 2.94
288 289 9.953565 ATTATAAAAGCACACTAGGAACAGTTA 57.046 29.630 0.00 0.00 0.00 2.24
297 298 1.808411 AGGAACAGTTACCATGTGCG 58.192 50.000 0.00 0.00 0.00 5.34
300 301 2.613474 GGAACAGTTACCATGTGCGGTA 60.613 50.000 0.00 0.00 40.67 4.02
313 314 2.683362 TGTGCGGTACAAAAACACATGA 59.317 40.909 0.00 0.00 36.39 3.07
323 324 5.960113 ACAAAAACACATGACAACTAGCAA 58.040 33.333 0.00 0.00 0.00 3.91
342 343 1.518367 ACTTGGGTGTGGGAGAGAAA 58.482 50.000 0.00 0.00 0.00 2.52
359 360 1.617947 AAAAAGGGCGTGTGGGCAAA 61.618 50.000 0.00 0.00 44.56 3.68
381 382 2.226330 TGTCAAATGCCCACACACTAC 58.774 47.619 0.00 0.00 0.00 2.73
411 412 2.887889 GCGTGCAAAGTGGCGTGTA 61.888 57.895 0.00 0.00 36.28 2.90
436 437 1.968017 CTGCTGAACGCCCACACAT 60.968 57.895 0.00 0.00 38.05 3.21
442 443 3.196207 AACGCCCACACATCAGCCT 62.196 57.895 0.00 0.00 0.00 4.58
443 444 2.360350 CGCCCACACATCAGCCTT 60.360 61.111 0.00 0.00 0.00 4.35
501 504 1.198759 ACGCCCATACCAGACCAGTT 61.199 55.000 0.00 0.00 0.00 3.16
531 534 5.064441 GCACTAGAAACATGCCAAGATTT 57.936 39.130 0.00 0.00 33.06 2.17
580 583 1.167851 CGTGTGGGTGAGATGCAAAT 58.832 50.000 0.00 0.00 0.00 2.32
629 632 3.614698 TTTTTGCGCTGCCTGGGG 61.615 61.111 9.73 0.00 0.00 4.96
641 644 4.697756 CTGGGGCGAGCCAACGAA 62.698 66.667 16.65 0.00 37.98 3.85
642 645 4.697756 TGGGGCGAGCCAACGAAG 62.698 66.667 16.65 0.00 37.98 3.79
644 647 3.423154 GGGCGAGCCAACGAAGTG 61.423 66.667 16.65 0.00 45.00 3.16
645 648 2.665185 GGCGAGCCAACGAAGTGT 60.665 61.111 9.58 0.00 45.00 3.55
646 649 2.251642 GGCGAGCCAACGAAGTGTT 61.252 57.895 9.58 0.00 45.00 3.32
653 656 3.432186 AACGAAGTGTTGCTGGGC 58.568 55.556 0.00 0.00 45.00 5.36
654 657 2.193536 AACGAAGTGTTGCTGGGCC 61.194 57.895 0.00 0.00 45.00 5.80
655 658 3.726517 CGAAGTGTTGCTGGGCCG 61.727 66.667 0.00 0.00 0.00 6.13
656 659 3.365265 GAAGTGTTGCTGGGCCGG 61.365 66.667 8.39 8.39 0.00 6.13
661 664 4.733542 GTTGCTGGGCCGGCCTAA 62.734 66.667 42.70 29.92 34.37 2.69
662 665 4.424711 TTGCTGGGCCGGCCTAAG 62.425 66.667 42.70 36.72 34.37 2.18
664 667 3.476419 GCTGGGCCGGCCTAAGTA 61.476 66.667 42.70 22.91 36.10 2.24
665 668 2.504519 CTGGGCCGGCCTAAGTAC 59.495 66.667 42.70 26.34 36.10 2.73
666 669 3.085296 TGGGCCGGCCTAAGTACC 61.085 66.667 42.70 25.58 36.10 3.34
667 670 3.085296 GGGCCGGCCTAAGTACCA 61.085 66.667 42.70 0.00 36.10 3.25
668 671 2.188731 GGCCGGCCTAAGTACCAC 59.811 66.667 38.76 7.31 0.00 4.16
669 672 2.188731 GCCGGCCTAAGTACCACC 59.811 66.667 18.11 0.00 0.00 4.61
670 673 2.662070 GCCGGCCTAAGTACCACCA 61.662 63.158 18.11 0.00 0.00 4.17
671 674 1.219935 CCGGCCTAAGTACCACCAC 59.780 63.158 0.00 0.00 0.00 4.16
672 675 1.219935 CGGCCTAAGTACCACCACC 59.780 63.158 0.00 0.00 0.00 4.61
673 676 1.262640 CGGCCTAAGTACCACCACCT 61.263 60.000 0.00 0.00 0.00 4.00
674 677 0.989602 GGCCTAAGTACCACCACCTT 59.010 55.000 0.00 0.00 0.00 3.50
675 678 1.065636 GGCCTAAGTACCACCACCTTC 60.066 57.143 0.00 0.00 0.00 3.46
676 679 1.405121 GCCTAAGTACCACCACCTTCG 60.405 57.143 0.00 0.00 0.00 3.79
677 680 2.173519 CCTAAGTACCACCACCTTCGA 58.826 52.381 0.00 0.00 0.00 3.71
678 681 2.165845 CCTAAGTACCACCACCTTCGAG 59.834 54.545 0.00 0.00 0.00 4.04
679 682 0.320697 AAGTACCACCACCTTCGAGC 59.679 55.000 0.00 0.00 0.00 5.03
680 683 1.445582 GTACCACCACCTTCGAGCG 60.446 63.158 0.00 0.00 0.00 5.03
681 684 3.291101 TACCACCACCTTCGAGCGC 62.291 63.158 0.00 0.00 0.00 5.92
683 686 4.680237 CACCACCTTCGAGCGCCA 62.680 66.667 2.29 0.00 0.00 5.69
684 687 4.379243 ACCACCTTCGAGCGCCAG 62.379 66.667 2.29 0.00 0.00 4.85
685 688 4.379243 CCACCTTCGAGCGCCAGT 62.379 66.667 2.29 0.00 0.00 4.00
686 689 2.571757 CACCTTCGAGCGCCAGTA 59.428 61.111 2.29 0.00 0.00 2.74
687 690 1.080093 CACCTTCGAGCGCCAGTAA 60.080 57.895 2.29 0.00 0.00 2.24
688 691 0.460284 CACCTTCGAGCGCCAGTAAT 60.460 55.000 2.29 0.00 0.00 1.89
689 692 0.179108 ACCTTCGAGCGCCAGTAATC 60.179 55.000 2.29 0.00 0.00 1.75
690 693 0.179111 CCTTCGAGCGCCAGTAATCA 60.179 55.000 2.29 0.00 0.00 2.57
691 694 1.640428 CTTCGAGCGCCAGTAATCAA 58.360 50.000 2.29 0.00 0.00 2.57
692 695 1.999735 CTTCGAGCGCCAGTAATCAAA 59.000 47.619 2.29 0.00 0.00 2.69
693 696 2.087501 TCGAGCGCCAGTAATCAAAA 57.912 45.000 2.29 0.00 0.00 2.44
694 697 1.730064 TCGAGCGCCAGTAATCAAAAC 59.270 47.619 2.29 0.00 0.00 2.43
695 698 1.202031 CGAGCGCCAGTAATCAAAACC 60.202 52.381 2.29 0.00 0.00 3.27
696 699 0.802494 AGCGCCAGTAATCAAAACCG 59.198 50.000 2.29 0.00 0.00 4.44
697 700 0.179174 GCGCCAGTAATCAAAACCGG 60.179 55.000 0.00 0.00 0.00 5.28
698 701 0.179174 CGCCAGTAATCAAAACCGGC 60.179 55.000 0.00 0.00 34.68 6.13
699 702 0.179174 GCCAGTAATCAAAACCGGCG 60.179 55.000 0.00 0.00 0.00 6.46
700 703 0.179174 CCAGTAATCAAAACCGGCGC 60.179 55.000 0.00 0.00 0.00 6.53
701 704 0.802494 CAGTAATCAAAACCGGCGCT 59.198 50.000 7.64 0.00 0.00 5.92
702 705 0.802494 AGTAATCAAAACCGGCGCTG 59.198 50.000 9.96 9.96 0.00 5.18
703 706 0.800012 GTAATCAAAACCGGCGCTGA 59.200 50.000 20.25 7.63 0.00 4.26
704 707 1.083489 TAATCAAAACCGGCGCTGAG 58.917 50.000 20.25 10.62 0.00 3.35
705 708 0.889186 AATCAAAACCGGCGCTGAGT 60.889 50.000 20.25 11.35 0.00 3.41
706 709 1.577328 ATCAAAACCGGCGCTGAGTG 61.577 55.000 20.25 9.80 0.00 3.51
707 710 3.660111 AAAACCGGCGCTGAGTGC 61.660 61.111 20.25 9.96 38.45 4.40
716 719 3.188786 GCTGAGTGCGCGGTTAGG 61.189 66.667 8.83 0.00 0.00 2.69
717 720 2.571757 CTGAGTGCGCGGTTAGGA 59.428 61.111 8.83 0.00 0.00 2.94
718 721 1.517257 CTGAGTGCGCGGTTAGGAG 60.517 63.158 8.83 0.00 0.00 3.69
719 722 2.886124 GAGTGCGCGGTTAGGAGC 60.886 66.667 8.83 0.00 0.00 4.70
720 723 3.358076 GAGTGCGCGGTTAGGAGCT 62.358 63.158 8.83 0.00 33.59 4.09
721 724 2.886124 GTGCGCGGTTAGGAGCTC 60.886 66.667 8.83 4.71 33.59 4.09
722 725 4.143333 TGCGCGGTTAGGAGCTCC 62.143 66.667 26.22 26.22 33.59 4.70
723 726 4.893601 GCGCGGTTAGGAGCTCCC 62.894 72.222 29.54 14.04 36.42 4.30
724 727 4.570663 CGCGGTTAGGAGCTCCCG 62.571 72.222 29.54 24.57 43.22 5.14
725 728 3.145551 GCGGTTAGGAGCTCCCGA 61.146 66.667 29.54 15.21 43.01 5.14
726 729 2.499827 GCGGTTAGGAGCTCCCGAT 61.500 63.158 29.54 13.83 43.01 4.18
727 730 1.660917 CGGTTAGGAGCTCCCGATC 59.339 63.158 29.54 16.91 43.01 3.69
728 731 1.807495 CGGTTAGGAGCTCCCGATCC 61.807 65.000 29.54 22.19 46.14 3.36
732 735 3.133946 GGAGCTCCCGATCCACTC 58.866 66.667 23.19 0.00 45.12 3.51
733 736 1.758514 GGAGCTCCCGATCCACTCA 60.759 63.158 23.19 0.00 45.12 3.41
734 737 1.330655 GGAGCTCCCGATCCACTCAA 61.331 60.000 23.19 0.00 45.12 3.02
735 738 0.179097 GAGCTCCCGATCCACTCAAC 60.179 60.000 0.87 0.00 0.00 3.18
736 739 0.616111 AGCTCCCGATCCACTCAACT 60.616 55.000 0.00 0.00 0.00 3.16
737 740 0.250513 GCTCCCGATCCACTCAACTT 59.749 55.000 0.00 0.00 0.00 2.66
738 741 1.339151 GCTCCCGATCCACTCAACTTT 60.339 52.381 0.00 0.00 0.00 2.66
739 742 2.876079 GCTCCCGATCCACTCAACTTTT 60.876 50.000 0.00 0.00 0.00 2.27
740 743 3.412386 CTCCCGATCCACTCAACTTTTT 58.588 45.455 0.00 0.00 0.00 1.94
766 769 3.078891 AGGGATTCTCCTCAACTTTGC 57.921 47.619 0.00 0.00 36.57 3.68
767 770 2.646798 AGGGATTCTCCTCAACTTTGCT 59.353 45.455 0.00 0.00 36.57 3.91
768 771 2.751806 GGGATTCTCCTCAACTTTGCTG 59.248 50.000 0.00 0.00 36.57 4.41
769 772 3.560025 GGGATTCTCCTCAACTTTGCTGA 60.560 47.826 0.00 0.00 36.57 4.26
770 773 4.074970 GGATTCTCCTCAACTTTGCTGAA 58.925 43.478 0.00 0.00 32.53 3.02
771 774 4.520492 GGATTCTCCTCAACTTTGCTGAAA 59.480 41.667 0.00 0.00 32.53 2.69
772 775 5.335504 GGATTCTCCTCAACTTTGCTGAAAG 60.336 44.000 0.00 0.00 38.09 2.62
773 776 4.422073 TCTCCTCAACTTTGCTGAAAGA 57.578 40.909 3.70 0.00 41.12 2.52
774 777 4.780815 TCTCCTCAACTTTGCTGAAAGAA 58.219 39.130 3.70 0.00 41.12 2.52
775 778 4.818546 TCTCCTCAACTTTGCTGAAAGAAG 59.181 41.667 3.70 0.00 41.12 2.85
776 779 3.316308 TCCTCAACTTTGCTGAAAGAAGC 59.684 43.478 3.70 0.00 41.12 3.86
777 780 3.317430 CCTCAACTTTGCTGAAAGAAGCT 59.683 43.478 3.70 0.00 43.90 3.74
778 781 4.516698 CCTCAACTTTGCTGAAAGAAGCTA 59.483 41.667 3.70 0.00 43.90 3.32
779 782 5.009010 CCTCAACTTTGCTGAAAGAAGCTAA 59.991 40.000 3.70 0.00 43.90 3.09
780 783 6.449635 TCAACTTTGCTGAAAGAAGCTAAA 57.550 33.333 3.70 0.00 43.90 1.85
781 784 6.862209 TCAACTTTGCTGAAAGAAGCTAAAA 58.138 32.000 3.70 0.00 43.90 1.52
782 785 7.319646 TCAACTTTGCTGAAAGAAGCTAAAAA 58.680 30.769 3.70 0.00 43.90 1.94
783 786 7.489113 TCAACTTTGCTGAAAGAAGCTAAAAAG 59.511 33.333 3.70 2.61 43.90 2.27
784 787 7.100458 ACTTTGCTGAAAGAAGCTAAAAAGA 57.900 32.000 11.95 0.00 43.90 2.52
785 788 7.199078 ACTTTGCTGAAAGAAGCTAAAAAGAG 58.801 34.615 11.95 0.00 43.90 2.85
786 789 5.695851 TGCTGAAAGAAGCTAAAAAGAGG 57.304 39.130 0.00 0.00 43.90 3.69
787 790 5.376625 TGCTGAAAGAAGCTAAAAAGAGGA 58.623 37.500 0.00 0.00 43.90 3.71
788 791 6.006449 TGCTGAAAGAAGCTAAAAAGAGGAT 58.994 36.000 0.00 0.00 43.90 3.24
789 792 6.072286 TGCTGAAAGAAGCTAAAAAGAGGATG 60.072 38.462 0.00 0.00 43.90 3.51
790 793 6.259550 TGAAAGAAGCTAAAAAGAGGATGC 57.740 37.500 0.00 0.00 0.00 3.91
791 794 5.769662 TGAAAGAAGCTAAAAAGAGGATGCA 59.230 36.000 0.00 0.00 0.00 3.96
792 795 6.435277 TGAAAGAAGCTAAAAAGAGGATGCAT 59.565 34.615 0.00 0.00 0.00 3.96
793 796 6.448207 AAGAAGCTAAAAAGAGGATGCATC 57.552 37.500 18.81 18.81 0.00 3.91
794 797 5.753716 AGAAGCTAAAAAGAGGATGCATCT 58.246 37.500 25.28 12.03 0.00 2.90
795 798 6.186234 AGAAGCTAAAAAGAGGATGCATCTT 58.814 36.000 25.28 19.17 38.65 2.40
796 799 6.318396 AGAAGCTAAAAAGAGGATGCATCTTC 59.682 38.462 26.73 26.73 35.98 2.87
797 800 5.753716 AGCTAAAAAGAGGATGCATCTTCT 58.246 37.500 29.95 29.95 44.00 2.85
798 801 6.893583 AGCTAAAAAGAGGATGCATCTTCTA 58.106 36.000 33.82 20.90 41.68 2.10
799 802 7.341805 AGCTAAAAAGAGGATGCATCTTCTAA 58.658 34.615 33.82 20.97 41.68 2.10
844 847 1.727511 GCAATTCCATGCCGCAGCTA 61.728 55.000 0.00 0.00 40.49 3.32
872 875 1.071814 ACGCCGAGCAAAACCCTTA 59.928 52.632 0.00 0.00 0.00 2.69
876 879 1.303091 CCGAGCAAAACCCTTACCCG 61.303 60.000 0.00 0.00 0.00 5.28
877 880 0.604511 CGAGCAAAACCCTTACCCGT 60.605 55.000 0.00 0.00 0.00 5.28
909 1369 0.679960 ATCCAAACCCTAGCGCAACC 60.680 55.000 11.47 0.00 0.00 3.77
917 1377 1.215647 CTAGCGCAACCGACTCCTT 59.784 57.895 11.47 0.00 36.29 3.36
939 1399 3.781770 CTCGCAGACATCCCCGAGC 62.782 68.421 6.04 0.00 40.35 5.03
1056 1517 4.900259 CCCCGCCCTCCACCCTAT 62.900 72.222 0.00 0.00 0.00 2.57
1057 1518 3.242291 CCCGCCCTCCACCCTATC 61.242 72.222 0.00 0.00 0.00 2.08
1060 1521 2.210711 CGCCCTCCACCCTATCCTC 61.211 68.421 0.00 0.00 0.00 3.71
1097 1558 4.821589 CTGCCGCGGTCCTCTTCC 62.822 72.222 28.70 7.68 0.00 3.46
1106 1567 1.817447 CGGTCCTCTTCCGTAGTCTTT 59.183 52.381 0.00 0.00 42.62 2.52
1109 1570 3.090790 GTCCTCTTCCGTAGTCTTTCCT 58.909 50.000 0.00 0.00 0.00 3.36
1111 1572 3.090037 CCTCTTCCGTAGTCTTTCCTGA 58.910 50.000 0.00 0.00 0.00 3.86
1123 1584 0.106719 TTTCCTGATCCCGCCATTCC 60.107 55.000 0.00 0.00 0.00 3.01
1124 1585 0.988145 TTCCTGATCCCGCCATTCCT 60.988 55.000 0.00 0.00 0.00 3.36
1128 1598 1.678101 CTGATCCCGCCATTCCTTTTC 59.322 52.381 0.00 0.00 0.00 2.29
1140 1610 1.368374 TCCTTTTCCCCGTTCCTCAT 58.632 50.000 0.00 0.00 0.00 2.90
1145 1615 2.438434 CCCCGTTCCTCATGGTGC 60.438 66.667 0.00 0.00 34.23 5.01
1147 1617 1.002134 CCCGTTCCTCATGGTGCTT 60.002 57.895 0.00 0.00 34.23 3.91
1322 1792 3.056201 GGTAAGAACCCATCCTCCCTA 57.944 52.381 0.00 0.00 40.21 3.53
1328 1798 0.949582 ACCCATCCTCCCTAGCCTAA 59.050 55.000 0.00 0.00 0.00 2.69
1359 1829 3.825308 CGCTCAGTATTGCATGTGTTTT 58.175 40.909 0.00 0.00 0.00 2.43
1364 1834 6.625740 GCTCAGTATTGCATGTGTTTTATGGT 60.626 38.462 0.00 0.00 0.00 3.55
1365 1835 7.225784 TCAGTATTGCATGTGTTTTATGGTT 57.774 32.000 0.00 0.00 0.00 3.67
1385 1855 4.219033 GTTCCTAGTTTGTGCGAATTGTG 58.781 43.478 0.00 0.00 0.00 3.33
1387 1857 4.633175 TCCTAGTTTGTGCGAATTGTGTA 58.367 39.130 0.00 0.00 0.00 2.90
1391 1861 5.338614 AGTTTGTGCGAATTGTGTACTAC 57.661 39.130 0.00 0.00 0.00 2.73
1392 1862 5.054477 AGTTTGTGCGAATTGTGTACTACT 58.946 37.500 0.00 0.00 0.00 2.57
1397 1867 6.854778 TGTGCGAATTGTGTACTACTGTATA 58.145 36.000 0.00 0.00 0.00 1.47
1405 1875 9.967346 AATTGTGTACTACTGTATATGCTAGTG 57.033 33.333 0.00 0.33 0.00 2.74
1444 2135 6.472887 TGGTGTTTAGATCCTGAGTTTTAGG 58.527 40.000 0.00 0.00 36.63 2.69
1456 2147 2.552743 GAGTTTTAGGCAGGAAACGCTT 59.447 45.455 6.79 0.00 39.94 4.68
1462 2153 1.071699 AGGCAGGAAACGCTTGAGTTA 59.928 47.619 0.00 0.00 33.41 2.24
1477 2168 2.132762 GAGTTACTGTTGGTGTGACCG 58.867 52.381 0.00 0.00 42.58 4.79
1544 2235 4.023279 TGTGCATCGCAAAAACTGATTACT 60.023 37.500 0.00 0.00 41.47 2.24
1567 2258 0.381089 GGATCTCATTGCTGCTGTGC 59.619 55.000 0.00 0.00 0.00 4.57
1585 2276 0.795085 GCATGAGTCGATGCCATAGC 59.205 55.000 13.45 1.90 42.57 2.97
1616 2307 5.684550 TCACGCTCGCTCTTCTAATAATA 57.315 39.130 0.00 0.00 0.00 0.98
1617 2308 6.255596 TCACGCTCGCTCTTCTAATAATAT 57.744 37.500 0.00 0.00 0.00 1.28
1627 2318 7.436673 CGCTCTTCTAATAATATATGGGCTCAC 59.563 40.741 0.00 0.00 0.00 3.51
1648 2339 0.390472 GCTGTGGTCCAGTAGCTGAC 60.390 60.000 17.09 0.00 43.55 3.51
1658 2349 0.886563 AGTAGCTGACGGTGGTGTAC 59.113 55.000 0.00 0.00 0.00 2.90
1661 2352 0.685097 AGCTGACGGTGGTGTACATT 59.315 50.000 0.00 0.00 0.00 2.71
1666 2357 1.810151 GACGGTGGTGTACATTGCATT 59.190 47.619 0.00 0.00 0.00 3.56
1726 2418 5.951747 ACTGGTAATGCCTGTTATCAAACAT 59.048 36.000 0.00 0.00 45.59 2.71
1730 2422 8.807118 TGGTAATGCCTGTTATCAAACATTTTA 58.193 29.630 6.36 0.00 44.43 1.52
1952 2856 7.180051 AGGATGATCCTTCACCTAGATGATAAC 59.820 40.741 8.51 0.00 46.91 1.89
1988 2892 5.363101 TCAGCCTAAACTATGATCTGCAAG 58.637 41.667 0.00 0.00 0.00 4.01
1994 2899 7.466590 GCCTAAACTATGATCTGCAAGTTTCTC 60.467 40.741 13.68 3.60 38.09 2.87
2002 2907 3.242518 TCTGCAAGTTTCTCGATGTACG 58.757 45.455 0.00 0.00 38.22 3.67
2155 3061 5.261209 TCATTGCTTGCTACTGTTTTGTT 57.739 34.783 0.00 0.00 0.00 2.83
2157 3063 3.435105 TGCTTGCTACTGTTTTGTTGG 57.565 42.857 0.00 0.00 0.00 3.77
2189 3127 1.000394 GTTTGGCACCATTAGGCGTTT 60.000 47.619 0.00 0.00 39.06 3.60
2190 3128 0.600557 TTGGCACCATTAGGCGTTTG 59.399 50.000 0.00 0.00 39.06 2.93
2271 3210 7.894708 TCTCAAAATTCTGCAAATGGATGTAA 58.105 30.769 0.00 0.00 0.00 2.41
2273 3212 7.669427 TCAAAATTCTGCAAATGGATGTAAGT 58.331 30.769 0.00 0.00 0.00 2.24
2292 3231 8.087982 TGTAAGTTTTCTCTGTGCTAGATTTG 57.912 34.615 0.00 0.00 34.21 2.32
2296 3252 7.108847 AGTTTTCTCTGTGCTAGATTTGCTAT 58.891 34.615 0.00 0.00 34.21 2.97
2318 3325 9.304731 GCTATGCATTCTATTTGTTTTCAATGA 57.695 29.630 3.54 0.00 39.70 2.57
2338 3345 2.551459 GAGCCATTCGATTTGGAGGATG 59.449 50.000 16.81 1.30 36.26 3.51
2413 3420 3.480470 CTCTTCAGAGAAACCAAGCCAA 58.520 45.455 0.00 0.00 44.74 4.52
2415 3422 3.822735 TCTTCAGAGAAACCAAGCCAATG 59.177 43.478 0.00 0.00 0.00 2.82
2464 3471 3.367703 GCCTGTATTCATATGGCCATTGC 60.368 47.826 26.37 9.66 37.81 3.56
2734 3742 5.163131 ACCACTACCATGGAAGTAAGTTTGT 60.163 40.000 21.47 9.58 43.02 2.83
2741 3749 7.238710 ACCATGGAAGTAAGTTTGTATTCCTT 58.761 34.615 21.47 0.00 40.11 3.36
2854 3873 7.441157 CACAGTCCTGTCTATTACTTTTTGTCA 59.559 37.037 0.00 0.00 42.83 3.58
2869 3888 6.719370 ACTTTTTGTCATGGAAGTATTAGCCA 59.281 34.615 0.00 0.00 35.91 4.75
2873 3892 8.450578 TTTGTCATGGAAGTATTAGCCATAAG 57.549 34.615 0.00 0.00 40.29 1.73
3141 4165 6.493458 ACTTTGATATACAGCAACTGGGTTTT 59.507 34.615 0.00 0.00 35.51 2.43
3166 4190 3.554934 TCATGCTCTGTTCCTTGTGTTT 58.445 40.909 0.00 0.00 0.00 2.83
3170 4194 5.689383 TGCTCTGTTCCTTGTGTTTAATC 57.311 39.130 0.00 0.00 0.00 1.75
3339 4364 8.634335 TTTATCAGTCAATCAAGTTTGATGGA 57.366 30.769 8.04 7.84 46.60 3.41
3374 4399 5.791336 GATCAAAAGGTTTTGTTCCTCCT 57.209 39.130 13.50 0.00 45.77 3.69
3381 4406 2.031870 GTTTTGTTCCTCCTGGCTTGT 58.968 47.619 0.00 0.00 0.00 3.16
3402 4427 1.592064 TGATTGCTCTTCGTTGTGCA 58.408 45.000 0.00 0.00 35.11 4.57
3403 4428 1.946081 TGATTGCTCTTCGTTGTGCAA 59.054 42.857 16.81 16.81 45.93 4.08
3404 4429 2.031769 TGATTGCTCTTCGTTGTGCAAG 60.032 45.455 18.36 0.83 45.37 4.01
3405 4430 0.029300 TTGCTCTTCGTTGTGCAAGC 59.971 50.000 12.82 0.00 40.16 4.01
3406 4431 1.094650 TGCTCTTCGTTGTGCAAGCA 61.095 50.000 1.41 1.41 37.41 3.91
3407 4432 0.239347 GCTCTTCGTTGTGCAAGCAT 59.761 50.000 0.00 0.00 0.00 3.79
3408 4433 1.959747 CTCTTCGTTGTGCAAGCATG 58.040 50.000 0.00 0.00 0.00 4.06
3409 4434 0.592637 TCTTCGTTGTGCAAGCATGG 59.407 50.000 0.00 0.00 0.00 3.66
3410 4435 0.311790 CTTCGTTGTGCAAGCATGGT 59.688 50.000 0.00 0.00 0.00 3.55
3411 4436 0.743688 TTCGTTGTGCAAGCATGGTT 59.256 45.000 3.82 3.82 0.00 3.67
3412 4437 0.743688 TCGTTGTGCAAGCATGGTTT 59.256 45.000 7.57 0.00 0.00 3.27
3413 4438 1.135915 TCGTTGTGCAAGCATGGTTTT 59.864 42.857 7.57 0.00 0.00 2.43
3414 4439 1.258458 CGTTGTGCAAGCATGGTTTTG 59.742 47.619 7.57 0.00 0.00 2.44
3433 4458 1.761784 TGGTCAGCAAGCATGGTTTTT 59.238 42.857 7.57 0.00 34.35 1.94
3435 4460 2.407090 GTCAGCAAGCATGGTTTTTCC 58.593 47.619 7.57 0.00 34.35 3.13
3454 4479 3.585862 TCCGTGATCAGTAGTTTTCTGC 58.414 45.455 0.00 0.00 33.48 4.26
3459 4484 3.740832 TGATCAGTAGTTTTCTGCGTGTG 59.259 43.478 0.00 0.00 37.60 3.82
3460 4485 1.864711 TCAGTAGTTTTCTGCGTGTGC 59.135 47.619 0.00 0.00 43.20 4.57
3461 4486 1.867233 CAGTAGTTTTCTGCGTGTGCT 59.133 47.619 0.00 0.00 43.34 4.40
3462 4487 3.057019 CAGTAGTTTTCTGCGTGTGCTA 58.943 45.455 0.00 0.00 43.34 3.49
3463 4488 3.679980 CAGTAGTTTTCTGCGTGTGCTAT 59.320 43.478 0.00 0.00 43.34 2.97
3464 4489 3.927142 AGTAGTTTTCTGCGTGTGCTATC 59.073 43.478 0.00 0.00 43.34 2.08
3465 4490 2.766313 AGTTTTCTGCGTGTGCTATCA 58.234 42.857 0.00 0.00 43.34 2.15
3466 4491 3.338249 AGTTTTCTGCGTGTGCTATCAT 58.662 40.909 0.00 0.00 43.34 2.45
3467 4492 3.125829 AGTTTTCTGCGTGTGCTATCATG 59.874 43.478 0.00 0.00 43.34 3.07
3468 4493 1.009078 TTCTGCGTGTGCTATCATGC 58.991 50.000 12.04 12.04 46.65 4.06
3469 4494 0.176449 TCTGCGTGTGCTATCATGCT 59.824 50.000 17.06 0.00 46.62 3.79
3470 4495 0.580578 CTGCGTGTGCTATCATGCTC 59.419 55.000 17.06 0.00 46.62 4.26
3471 4496 0.176449 TGCGTGTGCTATCATGCTCT 59.824 50.000 17.06 0.00 46.62 4.09
3472 4497 1.408702 TGCGTGTGCTATCATGCTCTA 59.591 47.619 17.06 1.47 46.62 2.43
3473 4498 2.159114 TGCGTGTGCTATCATGCTCTAA 60.159 45.455 17.06 1.20 46.62 2.10
3474 4499 2.866156 GCGTGTGCTATCATGCTCTAAA 59.134 45.455 11.79 0.00 44.14 1.85
3475 4500 3.496130 GCGTGTGCTATCATGCTCTAAAT 59.504 43.478 11.79 0.00 44.14 1.40
3476 4501 4.024556 GCGTGTGCTATCATGCTCTAAATT 60.025 41.667 11.79 0.00 44.14 1.82
3477 4502 5.504665 GCGTGTGCTATCATGCTCTAAATTT 60.505 40.000 11.79 0.00 44.14 1.82
3478 4503 5.905733 CGTGTGCTATCATGCTCTAAATTTG 59.094 40.000 0.00 0.00 0.00 2.32
3479 4504 6.238184 CGTGTGCTATCATGCTCTAAATTTGA 60.238 38.462 0.00 0.00 0.00 2.69
3480 4505 7.519488 CGTGTGCTATCATGCTCTAAATTTGAT 60.519 37.037 0.00 0.00 0.00 2.57
3481 4506 7.590322 GTGTGCTATCATGCTCTAAATTTGATG 59.410 37.037 0.00 0.00 0.00 3.07
3482 4507 7.082602 GTGCTATCATGCTCTAAATTTGATGG 58.917 38.462 0.00 0.00 0.00 3.51
3483 4508 6.999871 TGCTATCATGCTCTAAATTTGATGGA 59.000 34.615 0.00 0.00 29.70 3.41
3484 4509 7.503230 TGCTATCATGCTCTAAATTTGATGGAA 59.497 33.333 0.00 0.00 29.70 3.53
3485 4510 8.355169 GCTATCATGCTCTAAATTTGATGGAAA 58.645 33.333 0.00 0.00 29.70 3.13
3486 4511 9.894783 CTATCATGCTCTAAATTTGATGGAAAG 57.105 33.333 0.00 0.00 29.70 2.62
3487 4512 7.943079 TCATGCTCTAAATTTGATGGAAAGA 57.057 32.000 0.00 0.00 0.00 2.52
3488 4513 7.993101 TCATGCTCTAAATTTGATGGAAAGAG 58.007 34.615 0.00 4.37 0.00 2.85
3489 4514 7.613022 TCATGCTCTAAATTTGATGGAAAGAGT 59.387 33.333 11.59 0.00 0.00 3.24
3490 4515 7.149569 TGCTCTAAATTTGATGGAAAGAGTG 57.850 36.000 11.59 0.00 0.00 3.51
3491 4516 6.151648 TGCTCTAAATTTGATGGAAAGAGTGG 59.848 38.462 11.59 0.00 0.00 4.00
3492 4517 6.515272 TCTAAATTTGATGGAAAGAGTGGC 57.485 37.500 0.00 0.00 0.00 5.01
3493 4518 4.541973 AAATTTGATGGAAAGAGTGGCC 57.458 40.909 0.00 0.00 0.00 5.36
3494 4519 2.978156 TTTGATGGAAAGAGTGGCCT 57.022 45.000 3.32 0.00 0.00 5.19
3495 4520 2.205022 TTGATGGAAAGAGTGGCCTG 57.795 50.000 3.32 0.00 0.00 4.85
3496 4521 0.329261 TGATGGAAAGAGTGGCCTGG 59.671 55.000 3.32 0.00 0.00 4.45
3497 4522 0.620556 GATGGAAAGAGTGGCCTGGA 59.379 55.000 3.32 0.00 0.00 3.86
3498 4523 1.213926 GATGGAAAGAGTGGCCTGGAT 59.786 52.381 3.32 0.00 0.00 3.41
3499 4524 0.329261 TGGAAAGAGTGGCCTGGATG 59.671 55.000 3.32 0.00 0.00 3.51
3500 4525 0.329596 GGAAAGAGTGGCCTGGATGT 59.670 55.000 3.32 0.00 0.00 3.06
3501 4526 1.457346 GAAAGAGTGGCCTGGATGTG 58.543 55.000 3.32 0.00 0.00 3.21
3502 4527 0.610232 AAAGAGTGGCCTGGATGTGC 60.610 55.000 3.32 0.00 0.00 4.57
3503 4528 1.782201 AAGAGTGGCCTGGATGTGCA 61.782 55.000 3.32 0.00 0.00 4.57
3504 4529 1.748122 GAGTGGCCTGGATGTGCAG 60.748 63.158 3.32 0.00 0.00 4.41
3505 4530 2.189191 GAGTGGCCTGGATGTGCAGA 62.189 60.000 3.32 0.00 0.00 4.26
3506 4531 1.748122 GTGGCCTGGATGTGCAGAG 60.748 63.158 3.32 0.00 0.00 3.35
3507 4532 2.226315 TGGCCTGGATGTGCAGAGT 61.226 57.895 3.32 0.00 0.00 3.24
3508 4533 0.909133 TGGCCTGGATGTGCAGAGTA 60.909 55.000 3.32 0.00 0.00 2.59
3509 4534 0.179062 GGCCTGGATGTGCAGAGTAG 60.179 60.000 0.00 0.00 0.00 2.57
3510 4535 0.179062 GCCTGGATGTGCAGAGTAGG 60.179 60.000 0.00 6.49 0.00 3.18
3511 4536 0.467384 CCTGGATGTGCAGAGTAGGG 59.533 60.000 2.87 0.00 0.00 3.53
3512 4537 1.198713 CTGGATGTGCAGAGTAGGGT 58.801 55.000 0.00 0.00 0.00 4.34
3513 4538 0.904649 TGGATGTGCAGAGTAGGGTG 59.095 55.000 0.00 0.00 0.00 4.61
3514 4539 0.462759 GGATGTGCAGAGTAGGGTGC 60.463 60.000 0.00 0.00 40.29 5.01
3515 4540 0.539051 GATGTGCAGAGTAGGGTGCT 59.461 55.000 0.00 0.00 40.54 4.40
3516 4541 0.987294 ATGTGCAGAGTAGGGTGCTT 59.013 50.000 0.00 0.00 40.54 3.91
3517 4542 0.764890 TGTGCAGAGTAGGGTGCTTT 59.235 50.000 0.00 0.00 40.54 3.51
3518 4543 1.142870 TGTGCAGAGTAGGGTGCTTTT 59.857 47.619 0.00 0.00 40.54 2.27
3519 4544 2.370519 TGTGCAGAGTAGGGTGCTTTTA 59.629 45.455 0.00 0.00 40.54 1.52
3520 4545 3.003480 GTGCAGAGTAGGGTGCTTTTAG 58.997 50.000 0.00 0.00 40.54 1.85
3521 4546 2.010497 GCAGAGTAGGGTGCTTTTAGC 58.990 52.381 0.00 0.00 42.82 3.09
3522 4547 2.355209 GCAGAGTAGGGTGCTTTTAGCT 60.355 50.000 0.00 0.00 42.97 3.32
3523 4548 3.870299 GCAGAGTAGGGTGCTTTTAGCTT 60.870 47.826 0.00 0.00 42.97 3.74
3524 4549 4.623171 GCAGAGTAGGGTGCTTTTAGCTTA 60.623 45.833 0.00 0.00 42.97 3.09
3525 4550 5.112686 CAGAGTAGGGTGCTTTTAGCTTAG 58.887 45.833 0.00 0.00 42.97 2.18
3526 4551 4.162509 AGAGTAGGGTGCTTTTAGCTTAGG 59.837 45.833 0.00 0.00 42.97 2.69
3527 4552 2.808906 AGGGTGCTTTTAGCTTAGGG 57.191 50.000 0.00 0.00 42.97 3.53
3528 4553 2.275466 AGGGTGCTTTTAGCTTAGGGA 58.725 47.619 0.00 0.00 42.97 4.20
3531 4556 4.477213 AGGGTGCTTTTAGCTTAGGGATAA 59.523 41.667 0.00 0.00 42.97 1.75
3567 5030 6.945072 AGTTTAGTTTTTCACTGTCTTAGCG 58.055 36.000 0.00 0.00 35.97 4.26
3568 5031 6.537660 AGTTTAGTTTTTCACTGTCTTAGCGT 59.462 34.615 0.00 0.00 35.97 5.07
3574 5037 1.070134 TCACTGTCTTAGCGTGCCTTT 59.930 47.619 0.00 0.00 0.00 3.11
3575 5038 1.461127 CACTGTCTTAGCGTGCCTTTC 59.539 52.381 0.00 0.00 0.00 2.62
3576 5039 1.070134 ACTGTCTTAGCGTGCCTTTCA 59.930 47.619 0.00 0.00 0.00 2.69
3578 5041 2.346803 TGTCTTAGCGTGCCTTTCATC 58.653 47.619 0.00 0.00 0.00 2.92
3579 5042 2.289382 TGTCTTAGCGTGCCTTTCATCA 60.289 45.455 0.00 0.00 0.00 3.07
3580 5043 2.939103 GTCTTAGCGTGCCTTTCATCAT 59.061 45.455 0.00 0.00 0.00 2.45
3582 5045 2.988010 TAGCGTGCCTTTCATCATCT 57.012 45.000 0.00 0.00 0.00 2.90
3584 5047 3.266510 AGCGTGCCTTTCATCATCTAA 57.733 42.857 0.00 0.00 0.00 2.10
3585 5048 3.813443 AGCGTGCCTTTCATCATCTAAT 58.187 40.909 0.00 0.00 0.00 1.73
3586 5049 3.812053 AGCGTGCCTTTCATCATCTAATC 59.188 43.478 0.00 0.00 0.00 1.75
3587 5050 3.561310 GCGTGCCTTTCATCATCTAATCA 59.439 43.478 0.00 0.00 0.00 2.57
3588 5051 4.319333 GCGTGCCTTTCATCATCTAATCAG 60.319 45.833 0.00 0.00 0.00 2.90
3589 5052 5.052481 CGTGCCTTTCATCATCTAATCAGA 58.948 41.667 0.00 0.00 34.56 3.27
3590 5053 5.699915 CGTGCCTTTCATCATCTAATCAGAT 59.300 40.000 0.00 0.00 42.52 2.90
3605 5068 8.247666 TCTAATCAGATGAGACATGAGTTCAT 57.752 34.615 0.00 5.40 36.96 2.57
3637 5115 2.427453 GGAGACGAGCCTAGTGATTTCA 59.573 50.000 0.00 0.00 0.00 2.69
3659 5149 6.533730 TCATAATCTGATCGTAAATGGGCTT 58.466 36.000 0.00 0.00 0.00 4.35
3692 5599 3.356814 GGCTTAACCCTGGCAAGAA 57.643 52.632 0.00 0.00 0.00 2.52
3696 5603 2.872842 GCTTAACCCTGGCAAGAACGTA 60.873 50.000 0.00 0.00 0.00 3.57
3703 5610 2.615493 CCTGGCAAGAACGTAGATGGTT 60.615 50.000 0.00 0.00 0.00 3.67
3704 5611 3.074412 CTGGCAAGAACGTAGATGGTTT 58.926 45.455 0.00 0.00 0.00 3.27
3715 5622 4.097437 ACGTAGATGGTTTAAGATCTCGCA 59.903 41.667 0.00 0.00 31.29 5.10
3717 5631 5.174035 CGTAGATGGTTTAAGATCTCGCAAG 59.826 44.000 0.00 0.00 31.29 4.01
3731 5645 1.873591 TCGCAAGAGTCAAAGAAAGCC 59.126 47.619 0.00 0.00 45.01 4.35
3737 5651 1.889170 GAGTCAAAGAAAGCCAAGGGG 59.111 52.381 0.00 0.00 37.18 4.79
3738 5652 0.969149 GTCAAAGAAAGCCAAGGGGG 59.031 55.000 0.00 0.00 40.85 5.40
3742 5656 2.015456 AAGAAAGCCAAGGGGGAAAG 57.985 50.000 0.00 0.00 40.01 2.62
3743 5657 0.115152 AGAAAGCCAAGGGGGAAAGG 59.885 55.000 0.00 0.00 40.01 3.11
3744 5658 0.904865 GAAAGCCAAGGGGGAAAGGG 60.905 60.000 0.00 0.00 40.01 3.95
3745 5659 1.674931 AAAGCCAAGGGGGAAAGGGT 61.675 55.000 0.00 0.00 40.01 4.34
3746 5660 0.778479 AAGCCAAGGGGGAAAGGGTA 60.778 55.000 0.00 0.00 40.01 3.69
3747 5661 0.778479 AGCCAAGGGGGAAAGGGTAA 60.778 55.000 0.00 0.00 40.01 2.85
3748 5662 0.613853 GCCAAGGGGGAAAGGGTAAC 60.614 60.000 0.00 0.00 40.01 2.50
3749 5663 0.323087 CCAAGGGGGAAAGGGTAACG 60.323 60.000 0.00 0.00 40.01 3.18
3750 5664 0.963856 CAAGGGGGAAAGGGTAACGC 60.964 60.000 0.00 0.00 37.60 4.84
3751 5665 1.428718 AAGGGGGAAAGGGTAACGCA 61.429 55.000 0.00 0.00 37.60 5.24
3752 5666 1.212250 AGGGGGAAAGGGTAACGCAT 61.212 55.000 0.00 0.00 37.60 4.73
3753 5667 1.035385 GGGGGAAAGGGTAACGCATG 61.035 60.000 0.00 0.00 37.60 4.06
3769 5689 1.164411 CATGCCCTCGTTAACTTGCA 58.836 50.000 3.71 7.27 0.00 4.08
3775 5695 1.674817 CCTCGTTAACTTGCATCCCGT 60.675 52.381 3.71 0.00 0.00 5.28
3776 5696 1.659098 CTCGTTAACTTGCATCCCGTC 59.341 52.381 3.71 0.00 0.00 4.79
3780 5700 3.680937 CGTTAACTTGCATCCCGTCTTTA 59.319 43.478 3.71 0.00 0.00 1.85
3781 5701 4.201685 CGTTAACTTGCATCCCGTCTTTAG 60.202 45.833 3.71 0.00 0.00 1.85
3782 5702 3.695830 AACTTGCATCCCGTCTTTAGA 57.304 42.857 0.00 0.00 0.00 2.10
3783 5703 3.252974 ACTTGCATCCCGTCTTTAGAG 57.747 47.619 0.00 0.00 0.00 2.43
3784 5704 2.832129 ACTTGCATCCCGTCTTTAGAGA 59.168 45.455 0.00 0.00 0.00 3.10
3785 5705 3.260884 ACTTGCATCCCGTCTTTAGAGAA 59.739 43.478 0.00 0.00 32.66 2.87
3786 5706 3.973206 TGCATCCCGTCTTTAGAGAAA 57.027 42.857 0.00 0.00 32.66 2.52
3787 5707 3.861840 TGCATCCCGTCTTTAGAGAAAG 58.138 45.455 0.00 0.00 43.05 2.62
3788 5708 3.260884 TGCATCCCGTCTTTAGAGAAAGT 59.739 43.478 0.00 0.00 42.41 2.66
3789 5709 3.619038 GCATCCCGTCTTTAGAGAAAGTG 59.381 47.826 0.00 0.00 42.41 3.16
3790 5710 4.620803 GCATCCCGTCTTTAGAGAAAGTGA 60.621 45.833 0.00 0.00 42.41 3.41
3791 5711 4.516365 TCCCGTCTTTAGAGAAAGTGAC 57.484 45.455 0.00 0.00 42.41 3.67
3792 5712 3.057736 TCCCGTCTTTAGAGAAAGTGACG 60.058 47.826 0.00 0.00 42.41 4.35
3794 5714 3.898529 CGTCTTTAGAGAAAGTGACGGT 58.101 45.455 0.00 0.00 42.41 4.83
3795 5715 5.039480 CGTCTTTAGAGAAAGTGACGGTA 57.961 43.478 0.00 0.00 42.41 4.02
3796 5716 5.455392 CGTCTTTAGAGAAAGTGACGGTAA 58.545 41.667 0.00 0.00 42.41 2.85
3797 5717 5.341727 CGTCTTTAGAGAAAGTGACGGTAAC 59.658 44.000 0.00 0.00 42.41 2.50
3825 5745 3.928727 ACTACCGATTTTCTCGTGTCA 57.071 42.857 0.00 0.00 46.18 3.58
3826 5746 3.572584 ACTACCGATTTTCTCGTGTCAC 58.427 45.455 0.00 0.00 46.18 3.67
3836 5756 1.741706 TCTCGTGTCACCGTCTTATCC 59.258 52.381 0.00 0.00 0.00 2.59
3852 5772 6.206829 CGTCTTATCCCAAGGAAAAGAAAAGT 59.793 38.462 0.00 0.00 34.34 2.66
3858 5797 5.831525 TCCCAAGGAAAAGAAAAGTAGGTTC 59.168 40.000 0.00 0.00 0.00 3.62
3888 5830 1.129809 CGTTGATGCGTTCCACGTC 59.870 57.895 5.30 0.00 44.73 4.34
3891 5833 0.317160 TTGATGCGTTCCACGTCTCT 59.683 50.000 0.00 0.00 44.73 3.10
3929 5871 0.179100 CTCCACACGGCTCCATACTG 60.179 60.000 0.00 0.00 0.00 2.74
3930 5872 0.613572 TCCACACGGCTCCATACTGA 60.614 55.000 0.00 0.00 0.00 3.41
3931 5873 0.460284 CCACACGGCTCCATACTGAC 60.460 60.000 0.00 0.00 0.00 3.51
3932 5874 0.532573 CACACGGCTCCATACTGACT 59.467 55.000 0.00 0.00 0.00 3.41
3933 5875 0.818296 ACACGGCTCCATACTGACTC 59.182 55.000 0.00 0.00 0.00 3.36
3960 5903 5.984926 TGAAGAACAAACCAAAAGATGCATC 59.015 36.000 19.37 19.37 0.00 3.91
4033 5976 1.798813 CCACTTACCAACTCGACTTGC 59.201 52.381 0.00 0.00 0.00 4.01
4066 6010 1.202188 GCCCTGCAAATCTTTAGACGC 60.202 52.381 0.00 0.00 0.00 5.19
4068 6012 2.359900 CCTGCAAATCTTTAGACGCCT 58.640 47.619 0.00 0.00 0.00 5.52
4072 6016 5.406780 CCTGCAAATCTTTAGACGCCTATAG 59.593 44.000 0.00 0.00 0.00 1.31
4073 6017 6.156748 TGCAAATCTTTAGACGCCTATAGA 57.843 37.500 0.00 1.74 37.36 1.98
4076 6020 6.311690 GCAAATCTTTAGACGCCTATAGATCC 59.688 42.308 11.07 2.15 40.45 3.36
4080 6024 6.304624 TCTTTAGACGCCTATAGATCCTGAA 58.695 40.000 0.00 0.00 31.10 3.02
4082 6026 3.833732 AGACGCCTATAGATCCTGAACA 58.166 45.455 0.00 0.00 0.00 3.18
4087 6031 3.821600 GCCTATAGATCCTGAACACTCGA 59.178 47.826 0.00 0.00 0.00 4.04
4092 6036 6.723298 ATAGATCCTGAACACTCGAGATTT 57.277 37.500 21.68 11.25 0.00 2.17
4095 6039 4.600692 TCCTGAACACTCGAGATTTGAA 57.399 40.909 21.68 0.00 0.00 2.69
4100 6044 5.296748 TGAACACTCGAGATTTGAACATGA 58.703 37.500 21.68 0.00 0.00 3.07
4101 6045 5.177511 TGAACACTCGAGATTTGAACATGAC 59.822 40.000 21.68 4.55 0.00 3.06
4104 6048 5.527214 ACACTCGAGATTTGAACATGACAAA 59.473 36.000 21.68 18.75 40.62 2.83
4105 6049 6.205464 ACACTCGAGATTTGAACATGACAAAT 59.795 34.615 21.68 23.85 46.22 2.32
4106 6050 7.080099 CACTCGAGATTTGAACATGACAAATT 58.920 34.615 21.68 17.78 44.46 1.82
4107 6051 7.060289 CACTCGAGATTTGAACATGACAAATTG 59.940 37.037 21.68 19.30 44.46 2.32
4109 6053 7.647228 TCGAGATTTGAACATGACAAATTGAA 58.353 30.769 24.16 14.29 44.46 2.69
4110 6054 8.298854 TCGAGATTTGAACATGACAAATTGAAT 58.701 29.630 24.16 16.04 44.46 2.57
4111 6055 8.370321 CGAGATTTGAACATGACAAATTGAATG 58.630 33.333 24.16 5.98 44.46 2.67
4112 6056 9.199982 GAGATTTGAACATGACAAATTGAATGT 57.800 29.630 24.16 6.61 44.46 2.71
4113 6057 9.550406 AGATTTGAACATGACAAATTGAATGTT 57.450 25.926 24.16 21.98 44.46 2.71
4143 6087 9.431887 TGTGGTAATTTGTATTAGTCAACTCTC 57.568 33.333 0.00 0.00 0.00 3.20
4144 6088 8.592998 GTGGTAATTTGTATTAGTCAACTCTCG 58.407 37.037 0.00 0.00 0.00 4.04
4146 6090 7.491696 GGTAATTTGTATTAGTCAACTCTCGCT 59.508 37.037 0.00 0.00 0.00 4.93
4151 6095 7.154435 TGTATTAGTCAACTCTCGCTAGTTT 57.846 36.000 0.09 0.00 37.61 2.66
4164 6108 5.080969 TCGCTAGTTTAGTTGGTAAGCAT 57.919 39.130 0.00 0.00 0.00 3.79
4169 6113 6.315393 GCTAGTTTAGTTGGTAAGCATAGCAA 59.685 38.462 9.35 9.35 44.80 3.91
4176 6120 3.150767 TGGTAAGCATAGCAAAACCGTT 58.849 40.909 0.00 0.00 36.63 4.44
4179 6123 4.082949 GGTAAGCATAGCAAAACCGTTCTT 60.083 41.667 0.00 0.00 0.00 2.52
4181 6125 4.946784 AGCATAGCAAAACCGTTCTTAG 57.053 40.909 0.00 0.00 0.00 2.18
4184 6128 5.935789 AGCATAGCAAAACCGTTCTTAGTTA 59.064 36.000 0.00 0.00 0.00 2.24
4192 6136 8.476925 GCAAAACCGTTCTTAGTTAGATTTTTG 58.523 33.333 0.00 0.00 35.06 2.44
4194 6138 6.250344 ACCGTTCTTAGTTAGATTTTTGCC 57.750 37.500 0.00 0.00 31.54 4.52
4205 6149 8.742554 AGTTAGATTTTTGCCAGAAAATTACG 57.257 30.769 4.65 0.00 38.85 3.18
4206 6150 8.357402 AGTTAGATTTTTGCCAGAAAATTACGT 58.643 29.630 0.00 0.00 38.85 3.57
4207 6151 8.424731 GTTAGATTTTTGCCAGAAAATTACGTG 58.575 33.333 0.00 0.00 38.85 4.49
4208 6152 5.405269 AGATTTTTGCCAGAAAATTACGTGC 59.595 36.000 0.00 0.00 38.85 5.34
4209 6153 3.717400 TTTGCCAGAAAATTACGTGCA 57.283 38.095 0.00 0.00 0.00 4.57
4211 6155 3.214697 TGCCAGAAAATTACGTGCATG 57.785 42.857 3.82 3.82 0.00 4.06
4212 6156 1.919918 GCCAGAAAATTACGTGCATGC 59.080 47.619 11.82 11.82 0.00 4.06
4214 6158 2.164219 CCAGAAAATTACGTGCATGCCT 59.836 45.455 16.68 0.00 0.00 4.75
4216 6160 4.342772 CAGAAAATTACGTGCATGCCTAC 58.657 43.478 16.68 6.67 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
255 256 7.047891 CCTAGTGTGCTTTTATAATCAGGTGA 58.952 38.462 0.00 0.00 0.00 4.02
262 263 8.863872 AACTGTTCCTAGTGTGCTTTTATAAT 57.136 30.769 0.00 0.00 0.00 1.28
281 282 2.224329 TGTACCGCACATGGTAACTGTT 60.224 45.455 0.00 0.00 45.72 3.16
288 289 2.025155 TGTTTTTGTACCGCACATGGT 58.975 42.857 0.00 0.00 46.26 3.55
297 298 5.912955 GCTAGTTGTCATGTGTTTTTGTACC 59.087 40.000 0.00 0.00 0.00 3.34
300 301 5.574891 TGCTAGTTGTCATGTGTTTTTGT 57.425 34.783 0.00 0.00 0.00 2.83
313 314 2.297701 CACACCCAAGTTGCTAGTTGT 58.702 47.619 13.51 0.00 33.63 3.32
323 324 1.518367 TTTCTCTCCCACACCCAAGT 58.482 50.000 0.00 0.00 0.00 3.16
342 343 1.406860 ATTTTGCCCACACGCCCTTT 61.407 50.000 0.00 0.00 0.00 3.11
359 360 2.318908 AGTGTGTGGGCATTTGACATT 58.681 42.857 0.00 0.00 0.00 2.71
381 382 3.964875 GCACGCACACACAAGGGG 61.965 66.667 0.00 0.00 0.00 4.79
436 437 0.179020 CACCACACAGGAAAGGCTGA 60.179 55.000 0.00 0.00 41.22 4.26
442 443 1.384525 CCGTTTCACCACACAGGAAA 58.615 50.000 0.00 0.00 41.22 3.13
443 444 1.098712 GCCGTTTCACCACACAGGAA 61.099 55.000 0.00 0.00 41.22 3.36
489 490 2.165167 CCACGTAGAACTGGTCTGGTA 58.835 52.381 5.25 0.00 37.12 3.25
501 504 3.845178 CATGTTTCTAGTGCCACGTAGA 58.155 45.455 0.00 0.00 0.00 2.59
531 534 1.515519 GTCCGTTCGTGAGCGCATA 60.516 57.895 11.47 0.00 38.14 3.14
569 572 0.889994 GTGTGGGCATTTGCATCTCA 59.110 50.000 4.74 1.13 44.36 3.27
580 583 4.270392 CGTTCATACGTGTGGGCA 57.730 55.556 12.66 0.00 42.72 5.36
624 627 4.697756 TTCGTTGGCTCGCCCCAG 62.698 66.667 5.33 0.00 36.00 4.45
625 628 4.697756 CTTCGTTGGCTCGCCCCA 62.698 66.667 5.33 0.00 34.56 4.96
626 629 4.699522 ACTTCGTTGGCTCGCCCC 62.700 66.667 5.33 0.00 34.56 5.80
627 630 3.423154 CACTTCGTTGGCTCGCCC 61.423 66.667 5.33 0.00 34.56 6.13
628 631 2.251642 AACACTTCGTTGGCTCGCC 61.252 57.895 0.00 0.00 36.12 5.54
629 632 3.330275 AACACTTCGTTGGCTCGC 58.670 55.556 0.00 0.00 36.12 5.03
636 639 2.193536 GGCCCAGCAACACTTCGTT 61.194 57.895 0.00 0.00 38.83 3.85
637 640 2.594592 GGCCCAGCAACACTTCGT 60.595 61.111 0.00 0.00 0.00 3.85
638 641 3.726517 CGGCCCAGCAACACTTCG 61.727 66.667 0.00 0.00 0.00 3.79
639 642 3.365265 CCGGCCCAGCAACACTTC 61.365 66.667 0.00 0.00 0.00 3.01
644 647 4.733542 TTAGGCCGGCCCAGCAAC 62.734 66.667 41.72 15.73 36.58 4.17
645 648 4.424711 CTTAGGCCGGCCCAGCAA 62.425 66.667 41.72 27.02 36.58 3.91
647 650 3.476419 TACTTAGGCCGGCCCAGC 61.476 66.667 41.72 17.85 36.58 4.85
648 651 2.504519 GTACTTAGGCCGGCCCAG 59.495 66.667 41.72 36.12 36.58 4.45
649 652 3.085296 GGTACTTAGGCCGGCCCA 61.085 66.667 41.72 28.47 36.58 5.36
650 653 3.085296 TGGTACTTAGGCCGGCCC 61.085 66.667 41.72 24.74 36.58 5.80
651 654 2.188731 GTGGTACTTAGGCCGGCC 59.811 66.667 39.29 39.29 0.00 6.13
652 655 2.188731 GGTGGTACTTAGGCCGGC 59.811 66.667 21.18 21.18 0.00 6.13
653 656 1.219935 GTGGTGGTACTTAGGCCGG 59.780 63.158 0.00 0.00 0.00 6.13
654 657 1.219935 GGTGGTGGTACTTAGGCCG 59.780 63.158 0.00 0.00 0.00 6.13
655 658 0.989602 AAGGTGGTGGTACTTAGGCC 59.010 55.000 0.00 0.00 0.00 5.19
656 659 1.405121 CGAAGGTGGTGGTACTTAGGC 60.405 57.143 0.00 0.00 0.00 3.93
657 660 2.165845 CTCGAAGGTGGTGGTACTTAGG 59.834 54.545 0.00 0.00 0.00 2.69
658 661 2.416972 GCTCGAAGGTGGTGGTACTTAG 60.417 54.545 0.00 0.00 0.00 2.18
659 662 1.547372 GCTCGAAGGTGGTGGTACTTA 59.453 52.381 0.00 0.00 0.00 2.24
660 663 0.320697 GCTCGAAGGTGGTGGTACTT 59.679 55.000 0.00 0.00 0.00 2.24
661 664 1.874345 CGCTCGAAGGTGGTGGTACT 61.874 60.000 0.00 0.00 0.00 2.73
662 665 1.445582 CGCTCGAAGGTGGTGGTAC 60.446 63.158 0.00 0.00 0.00 3.34
663 666 2.967397 CGCTCGAAGGTGGTGGTA 59.033 61.111 0.00 0.00 0.00 3.25
664 667 4.681978 GCGCTCGAAGGTGGTGGT 62.682 66.667 0.00 0.00 0.00 4.16
666 669 4.680237 TGGCGCTCGAAGGTGGTG 62.680 66.667 7.64 0.00 0.00 4.17
667 670 4.379243 CTGGCGCTCGAAGGTGGT 62.379 66.667 7.64 0.00 0.00 4.16
668 671 2.501223 TTACTGGCGCTCGAAGGTGG 62.501 60.000 7.64 0.00 0.00 4.61
669 672 0.460284 ATTACTGGCGCTCGAAGGTG 60.460 55.000 7.64 0.00 0.00 4.00
670 673 0.179108 GATTACTGGCGCTCGAAGGT 60.179 55.000 7.64 0.11 0.00 3.50
671 674 0.179111 TGATTACTGGCGCTCGAAGG 60.179 55.000 7.64 0.00 0.00 3.46
672 675 1.640428 TTGATTACTGGCGCTCGAAG 58.360 50.000 7.64 2.70 0.00 3.79
673 676 2.087501 TTTGATTACTGGCGCTCGAA 57.912 45.000 7.64 0.00 0.00 3.71
674 677 1.730064 GTTTTGATTACTGGCGCTCGA 59.270 47.619 7.64 0.00 0.00 4.04
675 678 1.202031 GGTTTTGATTACTGGCGCTCG 60.202 52.381 7.64 0.30 0.00 5.03
676 679 1.202031 CGGTTTTGATTACTGGCGCTC 60.202 52.381 7.64 0.00 0.00 5.03
677 680 0.802494 CGGTTTTGATTACTGGCGCT 59.198 50.000 7.64 0.00 0.00 5.92
678 681 0.179174 CCGGTTTTGATTACTGGCGC 60.179 55.000 0.00 0.00 35.39 6.53
679 682 3.988459 CCGGTTTTGATTACTGGCG 57.012 52.632 0.00 0.00 35.39 5.69
681 684 0.179174 GCGCCGGTTTTGATTACTGG 60.179 55.000 1.90 0.00 43.57 4.00
682 685 0.802494 AGCGCCGGTTTTGATTACTG 59.198 50.000 2.29 0.00 0.00 2.74
683 686 0.802494 CAGCGCCGGTTTTGATTACT 59.198 50.000 2.29 0.00 0.00 2.24
684 687 0.800012 TCAGCGCCGGTTTTGATTAC 59.200 50.000 2.29 0.00 0.00 1.89
685 688 1.083489 CTCAGCGCCGGTTTTGATTA 58.917 50.000 2.29 0.00 0.00 1.75
686 689 0.889186 ACTCAGCGCCGGTTTTGATT 60.889 50.000 2.29 0.00 0.00 2.57
687 690 1.302511 ACTCAGCGCCGGTTTTGAT 60.303 52.632 2.29 0.00 0.00 2.57
688 691 2.110213 ACTCAGCGCCGGTTTTGA 59.890 55.556 2.29 0.00 0.00 2.69
689 692 2.252260 CACTCAGCGCCGGTTTTG 59.748 61.111 2.29 0.00 0.00 2.44
690 693 3.660111 GCACTCAGCGCCGGTTTT 61.660 61.111 2.29 0.00 0.00 2.43
699 702 3.188786 CCTAACCGCGCACTCAGC 61.189 66.667 8.75 0.00 40.87 4.26
700 703 1.517257 CTCCTAACCGCGCACTCAG 60.517 63.158 8.75 0.00 0.00 3.35
701 704 2.571757 CTCCTAACCGCGCACTCA 59.428 61.111 8.75 0.00 0.00 3.41
702 705 2.886124 GCTCCTAACCGCGCACTC 60.886 66.667 8.75 0.00 0.00 3.51
703 706 3.358076 GAGCTCCTAACCGCGCACT 62.358 63.158 8.75 0.00 0.00 4.40
704 707 2.886124 GAGCTCCTAACCGCGCAC 60.886 66.667 8.75 0.00 0.00 5.34
705 708 4.143333 GGAGCTCCTAACCGCGCA 62.143 66.667 26.25 0.00 0.00 6.09
706 709 4.893601 GGGAGCTCCTAACCGCGC 62.894 72.222 31.36 9.17 35.95 6.86
707 710 4.570663 CGGGAGCTCCTAACCGCG 62.571 72.222 31.36 20.95 39.85 6.46
708 711 2.423290 GATCGGGAGCTCCTAACCGC 62.423 65.000 31.36 13.24 45.58 5.68
710 713 0.759436 TGGATCGGGAGCTCCTAACC 60.759 60.000 31.36 25.11 45.22 2.85
711 714 0.389757 GTGGATCGGGAGCTCCTAAC 59.610 60.000 31.36 17.95 45.22 2.34
712 715 0.261991 AGTGGATCGGGAGCTCCTAA 59.738 55.000 31.36 19.95 45.22 2.69
713 716 0.178987 GAGTGGATCGGGAGCTCCTA 60.179 60.000 31.36 20.33 45.22 2.94
714 717 1.456705 GAGTGGATCGGGAGCTCCT 60.457 63.158 31.36 13.11 45.22 3.69
715 718 1.330655 TTGAGTGGATCGGGAGCTCC 61.331 60.000 25.59 25.59 45.20 4.70
716 719 0.179097 GTTGAGTGGATCGGGAGCTC 60.179 60.000 4.71 4.71 0.00 4.09
717 720 0.616111 AGTTGAGTGGATCGGGAGCT 60.616 55.000 0.00 0.00 0.00 4.09
718 721 0.250513 AAGTTGAGTGGATCGGGAGC 59.749 55.000 0.00 0.00 0.00 4.70
719 722 2.770164 AAAGTTGAGTGGATCGGGAG 57.230 50.000 0.00 0.00 0.00 4.30
720 723 3.502123 AAAAAGTTGAGTGGATCGGGA 57.498 42.857 0.00 0.00 0.00 5.14
747 750 8.230047 CTTTCAGCAAAGTTGAGGAGAATCCC 62.230 46.154 0.00 0.00 44.70 3.85
748 751 5.335504 CTTTCAGCAAAGTTGAGGAGAATCC 60.336 44.000 0.00 0.00 44.30 3.01
749 752 5.471456 TCTTTCAGCAAAGTTGAGGAGAATC 59.529 40.000 0.00 0.00 40.16 2.52
750 753 5.380043 TCTTTCAGCAAAGTTGAGGAGAAT 58.620 37.500 0.00 0.00 40.16 2.40
751 754 4.780815 TCTTTCAGCAAAGTTGAGGAGAA 58.219 39.130 0.00 0.00 40.16 2.87
752 755 4.422073 TCTTTCAGCAAAGTTGAGGAGA 57.578 40.909 0.00 0.00 40.16 3.71
753 756 4.556302 GCTTCTTTCAGCAAAGTTGAGGAG 60.556 45.833 0.00 0.00 40.16 3.69
754 757 3.316308 GCTTCTTTCAGCAAAGTTGAGGA 59.684 43.478 0.00 0.00 40.16 3.71
755 758 3.317430 AGCTTCTTTCAGCAAAGTTGAGG 59.683 43.478 0.00 0.00 42.84 3.86
756 759 4.564940 AGCTTCTTTCAGCAAAGTTGAG 57.435 40.909 0.00 0.00 42.84 3.02
757 760 6.449635 TTTAGCTTCTTTCAGCAAAGTTGA 57.550 33.333 0.00 0.00 42.84 3.18
758 761 7.489113 TCTTTTTAGCTTCTTTCAGCAAAGTTG 59.511 33.333 0.00 0.00 42.84 3.16
759 762 7.547227 TCTTTTTAGCTTCTTTCAGCAAAGTT 58.453 30.769 0.00 0.00 42.84 2.66
760 763 7.100458 TCTTTTTAGCTTCTTTCAGCAAAGT 57.900 32.000 0.00 0.00 42.84 2.66
761 764 6.640092 CCTCTTTTTAGCTTCTTTCAGCAAAG 59.360 38.462 0.00 0.00 42.84 2.77
762 765 6.321181 TCCTCTTTTTAGCTTCTTTCAGCAAA 59.679 34.615 0.00 0.00 42.84 3.68
763 766 5.827797 TCCTCTTTTTAGCTTCTTTCAGCAA 59.172 36.000 0.00 0.00 42.84 3.91
764 767 5.376625 TCCTCTTTTTAGCTTCTTTCAGCA 58.623 37.500 0.00 0.00 42.84 4.41
765 768 5.948992 TCCTCTTTTTAGCTTCTTTCAGC 57.051 39.130 0.00 0.00 40.44 4.26
766 769 6.072286 TGCATCCTCTTTTTAGCTTCTTTCAG 60.072 38.462 0.00 0.00 0.00 3.02
767 770 5.769662 TGCATCCTCTTTTTAGCTTCTTTCA 59.230 36.000 0.00 0.00 0.00 2.69
768 771 6.259550 TGCATCCTCTTTTTAGCTTCTTTC 57.740 37.500 0.00 0.00 0.00 2.62
769 772 6.662663 AGATGCATCCTCTTTTTAGCTTCTTT 59.337 34.615 23.06 0.00 34.23 2.52
770 773 6.186234 AGATGCATCCTCTTTTTAGCTTCTT 58.814 36.000 23.06 0.00 34.23 2.52
771 774 5.753716 AGATGCATCCTCTTTTTAGCTTCT 58.246 37.500 23.06 0.00 33.44 2.85
772 775 6.318396 AGAAGATGCATCCTCTTTTTAGCTTC 59.682 38.462 23.06 14.39 33.18 3.86
773 776 6.186234 AGAAGATGCATCCTCTTTTTAGCTT 58.814 36.000 23.06 6.11 33.18 3.74
774 777 5.753716 AGAAGATGCATCCTCTTTTTAGCT 58.246 37.500 23.06 2.38 33.18 3.32
775 778 7.559590 TTAGAAGATGCATCCTCTTTTTAGC 57.440 36.000 28.25 4.92 33.18 3.09
781 784 8.997323 CGAATTTATTAGAAGATGCATCCTCTT 58.003 33.333 28.25 15.98 35.69 2.85
782 785 7.605691 CCGAATTTATTAGAAGATGCATCCTCT 59.394 37.037 26.74 26.74 32.64 3.69
783 786 7.625185 GCCGAATTTATTAGAAGATGCATCCTC 60.625 40.741 23.06 19.46 0.00 3.71
784 787 6.150140 GCCGAATTTATTAGAAGATGCATCCT 59.850 38.462 23.06 15.81 0.00 3.24
785 788 6.317857 GCCGAATTTATTAGAAGATGCATCC 58.682 40.000 23.06 8.93 0.00 3.51
786 789 6.317857 GGCCGAATTTATTAGAAGATGCATC 58.682 40.000 19.37 19.37 0.00 3.91
787 790 5.183904 GGGCCGAATTTATTAGAAGATGCAT 59.816 40.000 0.00 0.00 0.00 3.96
788 791 4.518970 GGGCCGAATTTATTAGAAGATGCA 59.481 41.667 0.00 0.00 0.00 3.96
789 792 4.378459 CGGGCCGAATTTATTAGAAGATGC 60.378 45.833 24.41 0.00 0.00 3.91
790 793 4.994852 TCGGGCCGAATTTATTAGAAGATG 59.005 41.667 29.11 0.00 31.06 2.90
791 794 5.223449 TCGGGCCGAATTTATTAGAAGAT 57.777 39.130 29.11 0.00 31.06 2.40
792 795 4.675976 TCGGGCCGAATTTATTAGAAGA 57.324 40.909 29.11 0.00 31.06 2.87
793 796 5.744666 TTTCGGGCCGAATTTATTAGAAG 57.255 39.130 38.71 0.00 45.28 2.85
794 797 4.035909 GCTTTCGGGCCGAATTTATTAGAA 59.964 41.667 38.71 21.00 45.28 2.10
795 798 3.562557 GCTTTCGGGCCGAATTTATTAGA 59.437 43.478 38.71 21.71 45.28 2.10
796 799 3.304458 GGCTTTCGGGCCGAATTTATTAG 60.304 47.826 38.71 30.71 45.28 1.73
797 800 2.619646 GGCTTTCGGGCCGAATTTATTA 59.380 45.455 38.71 23.13 45.28 0.98
798 801 1.407618 GGCTTTCGGGCCGAATTTATT 59.592 47.619 38.71 0.00 45.28 1.40
799 802 1.029681 GGCTTTCGGGCCGAATTTAT 58.970 50.000 38.71 0.00 45.28 1.40
844 847 2.264794 CTCGGCGTGGGCTTAGTT 59.735 61.111 6.85 0.00 39.81 2.24
872 875 1.071228 GATTATAAAGGCCCGACGGGT 59.929 52.381 32.76 16.54 46.51 5.28
876 879 3.317149 GGTTTGGATTATAAAGGCCCGAC 59.683 47.826 0.00 0.00 0.00 4.79
877 880 3.558033 GGTTTGGATTATAAAGGCCCGA 58.442 45.455 0.00 0.00 0.00 5.14
909 1369 1.153939 CTGCGAGGTGAAGGAGTCG 60.154 63.158 0.00 0.00 35.51 4.18
917 1377 2.359169 GGGGATGTCTGCGAGGTGA 61.359 63.158 0.00 0.00 0.00 4.02
1047 1508 0.934302 TGGGGAGAGGATAGGGTGGA 60.934 60.000 0.00 0.00 0.00 4.02
1055 1516 2.441001 GACATGAACATGGGGAGAGGAT 59.559 50.000 17.25 0.00 42.91 3.24
1056 1517 1.839994 GACATGAACATGGGGAGAGGA 59.160 52.381 17.25 0.00 42.91 3.71
1057 1518 1.473965 CGACATGAACATGGGGAGAGG 60.474 57.143 17.25 0.00 42.91 3.69
1060 1521 1.656652 GTCGACATGAACATGGGGAG 58.343 55.000 11.55 7.07 42.91 4.30
1088 1549 3.090790 AGGAAAGACTACGGAAGAGGAC 58.909 50.000 0.00 0.00 0.00 3.85
1089 1550 3.090037 CAGGAAAGACTACGGAAGAGGA 58.910 50.000 0.00 0.00 0.00 3.71
1090 1551 3.090037 TCAGGAAAGACTACGGAAGAGG 58.910 50.000 0.00 0.00 0.00 3.69
1097 1558 1.536284 GCGGGATCAGGAAAGACTACG 60.536 57.143 0.00 0.00 0.00 3.51
1102 1563 0.918983 AATGGCGGGATCAGGAAAGA 59.081 50.000 0.00 0.00 0.00 2.52
1103 1564 1.312815 GAATGGCGGGATCAGGAAAG 58.687 55.000 0.00 0.00 0.00 2.62
1106 1567 0.988145 AAGGAATGGCGGGATCAGGA 60.988 55.000 0.00 0.00 0.00 3.86
1109 1570 1.684869 GGAAAAGGAATGGCGGGATCA 60.685 52.381 0.00 0.00 0.00 2.92
1111 1572 0.397114 GGGAAAAGGAATGGCGGGAT 60.397 55.000 0.00 0.00 0.00 3.85
1123 1584 1.271926 ACCATGAGGAACGGGGAAAAG 60.272 52.381 0.00 0.00 38.69 2.27
1124 1585 0.774908 ACCATGAGGAACGGGGAAAA 59.225 50.000 0.00 0.00 38.69 2.29
1128 1598 2.438434 GCACCATGAGGAACGGGG 60.438 66.667 0.00 0.00 38.69 5.73
1140 1610 3.620488 AGACAGAAAGAACAAAGCACCA 58.380 40.909 0.00 0.00 0.00 4.17
1145 1615 5.490139 TCAGCAAGACAGAAAGAACAAAG 57.510 39.130 0.00 0.00 0.00 2.77
1147 1617 6.455360 AAATCAGCAAGACAGAAAGAACAA 57.545 33.333 0.00 0.00 0.00 2.83
1322 1792 2.112815 GCGCGGTGGAAATTAGGCT 61.113 57.895 8.83 0.00 0.00 4.58
1328 1798 0.178068 ATACTGAGCGCGGTGGAAAT 59.822 50.000 18.92 0.66 34.79 2.17
1359 1829 3.965379 TCGCACAAACTAGGAACCATA 57.035 42.857 0.00 0.00 0.00 2.74
1364 1834 3.880490 ACACAATTCGCACAAACTAGGAA 59.120 39.130 0.00 0.00 0.00 3.36
1365 1835 3.472652 ACACAATTCGCACAAACTAGGA 58.527 40.909 0.00 0.00 0.00 2.94
1385 1855 8.618702 TCTTCCACTAGCATATACAGTAGTAC 57.381 38.462 0.00 0.00 31.96 2.73
1387 1857 9.233649 GTATCTTCCACTAGCATATACAGTAGT 57.766 37.037 0.00 0.00 0.00 2.73
1397 1867 9.051259 ACCATATTATGTATCTTCCACTAGCAT 57.949 33.333 3.10 0.00 0.00 3.79
1444 2135 2.096218 CAGTAACTCAAGCGTTTCCTGC 60.096 50.000 0.00 0.00 0.00 4.85
1456 2147 2.482316 CGGTCACACCAACAGTAACTCA 60.482 50.000 0.00 0.00 38.47 3.41
1462 2153 0.179084 CAGACGGTCACACCAACAGT 60.179 55.000 11.27 0.00 38.47 3.55
1477 2168 9.727627 CTATTTATCCAAAATCAAAGCTCAGAC 57.272 33.333 0.00 0.00 0.00 3.51
1505 2196 4.446994 TGCACAAGAACACATTTCAACA 57.553 36.364 0.00 0.00 0.00 3.33
1523 2214 4.475028 CAGTAATCAGTTTTTGCGATGCA 58.525 39.130 0.00 0.00 36.47 3.96
1544 2235 0.622136 AGCAGCAATGAGATCCACCA 59.378 50.000 0.00 0.00 0.00 4.17
1567 2258 1.066136 CGCTATGGCATCGACTCATG 58.934 55.000 1.65 0.00 38.60 3.07
1598 2289 6.422400 GCCCATATATTATTAGAAGAGCGAGC 59.578 42.308 0.00 0.00 0.00 5.03
1601 2292 7.436673 GTGAGCCCATATATTATTAGAAGAGCG 59.563 40.741 0.00 0.00 0.00 5.03
1648 2339 1.539388 ACAATGCAATGTACACCACCG 59.461 47.619 5.37 0.00 0.00 4.94
1658 2349 2.388310 TGCCCAATCACAATGCAATG 57.612 45.000 0.00 0.00 0.00 2.82
1661 2352 2.568062 AGAAATGCCCAATCACAATGCA 59.432 40.909 0.00 0.00 36.23 3.96
1666 2357 5.999205 AACATAAGAAATGCCCAATCACA 57.001 34.783 0.00 0.00 0.00 3.58
1730 2422 9.726438 AGAATGCTAACAAGTAATCAAGTACTT 57.274 29.630 1.12 1.12 43.56 2.24
1833 2525 8.560355 ACACAATCTACATAATAGTTGCACAA 57.440 30.769 0.00 0.00 0.00 3.33
1902 2806 7.012421 CCTTATCTAGTTCAAACCAACATAGGC 59.988 40.741 0.00 0.00 0.00 3.93
1938 2842 9.209175 GCTAGTTAATTGGTTATCATCTAGGTG 57.791 37.037 0.00 0.00 0.00 4.00
1952 2856 6.116126 AGTTTAGGCTGAGCTAGTTAATTGG 58.884 40.000 3.72 0.00 0.00 3.16
1988 2892 2.778659 AGTACGCGTACATCGAGAAAC 58.221 47.619 41.10 20.52 41.61 2.78
1994 2899 2.780014 CCAAAGTAGTACGCGTACATCG 59.220 50.000 41.10 25.43 38.48 3.84
2002 2907 2.443887 TGTCCACCAAAGTAGTACGC 57.556 50.000 0.00 0.00 0.00 4.42
2155 3061 4.442192 GGTGCCAAACAAAGATAACAACCA 60.442 41.667 0.00 0.00 0.00 3.67
2157 3063 4.688021 TGGTGCCAAACAAAGATAACAAC 58.312 39.130 0.00 0.00 0.00 3.32
2253 3192 7.899973 AGAAAACTTACATCCATTTGCAGAAT 58.100 30.769 0.00 0.00 0.00 2.40
2264 3203 6.398918 TCTAGCACAGAGAAAACTTACATCC 58.601 40.000 0.00 0.00 0.00 3.51
2271 3210 5.312079 AGCAAATCTAGCACAGAGAAAACT 58.688 37.500 0.00 0.00 36.48 2.66
2273 3212 6.183360 GCATAGCAAATCTAGCACAGAGAAAA 60.183 38.462 0.00 0.00 36.48 2.29
2292 3231 9.304731 TCATTGAAAACAAATAGAATGCATAGC 57.695 29.630 0.00 0.00 0.00 2.97
2296 3252 6.591062 GGCTCATTGAAAACAAATAGAATGCA 59.409 34.615 0.00 0.00 0.00 3.96
2318 3325 2.092212 ACATCCTCCAAATCGAATGGCT 60.092 45.455 14.16 0.00 37.88 4.75
2338 3345 3.137176 TCATCTGGGGAAAGGATCATCAC 59.863 47.826 0.00 0.00 0.00 3.06
2413 3420 0.762461 GGCTAGGAGGACCAGAGCAT 60.762 60.000 12.67 0.00 44.20 3.79
2415 3422 0.762461 ATGGCTAGGAGGACCAGAGC 60.762 60.000 0.00 0.00 42.74 4.09
2421 3428 0.253044 TGTGCAATGGCTAGGAGGAC 59.747 55.000 0.00 0.00 41.91 3.85
2530 3537 3.376540 GTGAAATTGCTGTTACGCCAAA 58.623 40.909 0.00 0.00 0.00 3.28
2741 3749 8.410141 CACCACTAGACAAAAGTTGGATTAAAA 58.590 33.333 0.00 0.00 34.12 1.52
2854 3873 5.940617 TGCACTTATGGCTAATACTTCCAT 58.059 37.500 0.00 0.00 42.70 3.41
2873 3892 8.649973 AACTATTGATTAGCTTACTACTGCAC 57.350 34.615 0.00 0.00 0.00 4.57
2999 4022 4.990426 CCCAAATCAACATTGTCTGGAAAC 59.010 41.667 9.50 0.00 0.00 2.78
3129 4153 2.738314 GCATGATCAAAAACCCAGTTGC 59.262 45.455 0.00 0.00 0.00 4.17
3141 4165 3.754850 CACAAGGAACAGAGCATGATCAA 59.245 43.478 14.38 0.00 32.51 2.57
3166 4190 2.429250 TGTCGGAATCGCCTGAAGATTA 59.571 45.455 0.00 0.00 38.32 1.75
3170 4194 1.212616 GATGTCGGAATCGCCTGAAG 58.787 55.000 0.00 0.00 36.13 3.02
3339 4364 6.994421 ACCTTTTGATCCAAAACCATAGTT 57.006 33.333 1.19 0.00 38.24 2.24
3372 4397 1.891150 AGAGCAATCAAACAAGCCAGG 59.109 47.619 0.00 0.00 0.00 4.45
3373 4398 3.572584 GAAGAGCAATCAAACAAGCCAG 58.427 45.455 0.00 0.00 0.00 4.85
3374 4399 2.030893 CGAAGAGCAATCAAACAAGCCA 60.031 45.455 0.00 0.00 0.00 4.75
3381 4406 2.357323 TGCACAACGAAGAGCAATCAAA 59.643 40.909 0.00 0.00 33.48 2.69
3402 4427 1.412079 TGCTGACCAAAACCATGCTT 58.588 45.000 0.00 0.00 0.00 3.91
3403 4428 1.342174 CTTGCTGACCAAAACCATGCT 59.658 47.619 0.00 0.00 31.94 3.79
3404 4429 1.787012 CTTGCTGACCAAAACCATGC 58.213 50.000 0.00 0.00 31.94 4.06
3405 4430 1.068895 TGCTTGCTGACCAAAACCATG 59.931 47.619 0.00 0.00 31.94 3.66
3406 4431 1.412079 TGCTTGCTGACCAAAACCAT 58.588 45.000 0.00 0.00 31.94 3.55
3407 4432 1.068895 CATGCTTGCTGACCAAAACCA 59.931 47.619 0.00 0.00 31.94 3.67
3408 4433 1.606224 CCATGCTTGCTGACCAAAACC 60.606 52.381 0.00 0.00 31.94 3.27
3409 4434 1.069049 ACCATGCTTGCTGACCAAAAC 59.931 47.619 0.00 0.00 31.94 2.43
3410 4435 1.412079 ACCATGCTTGCTGACCAAAA 58.588 45.000 0.00 0.00 31.94 2.44
3411 4436 1.412079 AACCATGCTTGCTGACCAAA 58.588 45.000 0.00 0.00 31.94 3.28
3412 4437 1.412079 AAACCATGCTTGCTGACCAA 58.588 45.000 0.00 0.00 0.00 3.67
3413 4438 1.412079 AAAACCATGCTTGCTGACCA 58.588 45.000 0.00 0.00 0.00 4.02
3414 4439 2.407090 GAAAAACCATGCTTGCTGACC 58.593 47.619 0.00 0.00 0.00 4.02
3433 4458 3.585862 GCAGAAAACTACTGATCACGGA 58.414 45.455 0.00 0.00 37.54 4.69
3435 4460 2.987149 ACGCAGAAAACTACTGATCACG 59.013 45.455 0.00 0.00 37.54 4.35
3444 4469 3.920446 TGATAGCACACGCAGAAAACTA 58.080 40.909 0.00 0.00 42.27 2.24
3454 4479 5.663795 AATTTAGAGCATGATAGCACACG 57.336 39.130 0.00 0.00 36.85 4.49
3459 4484 7.444629 TCCATCAAATTTAGAGCATGATAGC 57.555 36.000 0.00 0.00 0.00 2.97
3460 4485 9.894783 CTTTCCATCAAATTTAGAGCATGATAG 57.105 33.333 0.00 0.00 0.00 2.08
3461 4486 9.631257 TCTTTCCATCAAATTTAGAGCATGATA 57.369 29.630 0.00 0.00 0.00 2.15
3462 4487 8.529424 TCTTTCCATCAAATTTAGAGCATGAT 57.471 30.769 0.00 0.00 0.00 2.45
3463 4488 7.613022 ACTCTTTCCATCAAATTTAGAGCATGA 59.387 33.333 10.45 0.00 0.00 3.07
3464 4489 7.701078 CACTCTTTCCATCAAATTTAGAGCATG 59.299 37.037 10.45 0.00 0.00 4.06
3465 4490 7.147949 CCACTCTTTCCATCAAATTTAGAGCAT 60.148 37.037 10.45 0.00 0.00 3.79
3466 4491 6.151648 CCACTCTTTCCATCAAATTTAGAGCA 59.848 38.462 10.45 0.00 0.00 4.26
3467 4492 6.558909 CCACTCTTTCCATCAAATTTAGAGC 58.441 40.000 10.45 0.00 0.00 4.09
3468 4493 6.405176 GGCCACTCTTTCCATCAAATTTAGAG 60.405 42.308 0.00 9.38 0.00 2.43
3469 4494 5.418840 GGCCACTCTTTCCATCAAATTTAGA 59.581 40.000 0.00 0.00 0.00 2.10
3470 4495 5.420104 AGGCCACTCTTTCCATCAAATTTAG 59.580 40.000 5.01 0.00 0.00 1.85
3471 4496 5.185635 CAGGCCACTCTTTCCATCAAATTTA 59.814 40.000 5.01 0.00 0.00 1.40
3472 4497 4.020839 CAGGCCACTCTTTCCATCAAATTT 60.021 41.667 5.01 0.00 0.00 1.82
3473 4498 3.512724 CAGGCCACTCTTTCCATCAAATT 59.487 43.478 5.01 0.00 0.00 1.82
3474 4499 3.094572 CAGGCCACTCTTTCCATCAAAT 58.905 45.455 5.01 0.00 0.00 2.32
3475 4500 2.517959 CAGGCCACTCTTTCCATCAAA 58.482 47.619 5.01 0.00 0.00 2.69
3476 4501 1.272092 CCAGGCCACTCTTTCCATCAA 60.272 52.381 5.01 0.00 0.00 2.57
3477 4502 0.329261 CCAGGCCACTCTTTCCATCA 59.671 55.000 5.01 0.00 0.00 3.07
3478 4503 0.620556 TCCAGGCCACTCTTTCCATC 59.379 55.000 5.01 0.00 0.00 3.51
3479 4504 1.064166 CATCCAGGCCACTCTTTCCAT 60.064 52.381 5.01 0.00 0.00 3.41
3480 4505 0.329261 CATCCAGGCCACTCTTTCCA 59.671 55.000 5.01 0.00 0.00 3.53
3481 4506 0.329596 ACATCCAGGCCACTCTTTCC 59.670 55.000 5.01 0.00 0.00 3.13
3482 4507 1.457346 CACATCCAGGCCACTCTTTC 58.543 55.000 5.01 0.00 0.00 2.62
3483 4508 0.610232 GCACATCCAGGCCACTCTTT 60.610 55.000 5.01 0.00 0.00 2.52
3484 4509 1.001641 GCACATCCAGGCCACTCTT 60.002 57.895 5.01 0.00 0.00 2.85
3485 4510 2.194388 CTGCACATCCAGGCCACTCT 62.194 60.000 5.01 0.00 0.00 3.24
3486 4511 1.748122 CTGCACATCCAGGCCACTC 60.748 63.158 5.01 0.00 0.00 3.51
3487 4512 2.194388 CTCTGCACATCCAGGCCACT 62.194 60.000 5.01 0.00 33.64 4.00
3488 4513 1.748122 CTCTGCACATCCAGGCCAC 60.748 63.158 5.01 0.00 33.64 5.01
3489 4514 0.909133 TACTCTGCACATCCAGGCCA 60.909 55.000 5.01 0.00 33.64 5.36
3490 4515 0.179062 CTACTCTGCACATCCAGGCC 60.179 60.000 0.00 0.00 33.64 5.19
3491 4516 0.179062 CCTACTCTGCACATCCAGGC 60.179 60.000 0.00 0.00 33.64 4.85
3492 4517 0.467384 CCCTACTCTGCACATCCAGG 59.533 60.000 0.00 0.00 33.64 4.45
3493 4518 1.134580 CACCCTACTCTGCACATCCAG 60.135 57.143 0.00 0.00 0.00 3.86
3494 4519 0.904649 CACCCTACTCTGCACATCCA 59.095 55.000 0.00 0.00 0.00 3.41
3495 4520 0.462759 GCACCCTACTCTGCACATCC 60.463 60.000 0.00 0.00 33.31 3.51
3496 4521 0.539051 AGCACCCTACTCTGCACATC 59.461 55.000 0.00 0.00 35.73 3.06
3497 4522 0.987294 AAGCACCCTACTCTGCACAT 59.013 50.000 0.00 0.00 35.73 3.21
3498 4523 0.764890 AAAGCACCCTACTCTGCACA 59.235 50.000 0.00 0.00 35.73 4.57
3499 4524 1.897560 AAAAGCACCCTACTCTGCAC 58.102 50.000 0.00 0.00 35.73 4.57
3500 4525 2.615493 GCTAAAAGCACCCTACTCTGCA 60.615 50.000 0.00 0.00 41.89 4.41
3501 4526 2.010497 GCTAAAAGCACCCTACTCTGC 58.990 52.381 0.00 0.00 41.89 4.26
3502 4527 3.618690 AGCTAAAAGCACCCTACTCTG 57.381 47.619 1.22 0.00 45.56 3.35
3503 4528 4.162509 CCTAAGCTAAAAGCACCCTACTCT 59.837 45.833 1.22 0.00 45.56 3.24
3504 4529 4.443621 CCTAAGCTAAAAGCACCCTACTC 58.556 47.826 1.22 0.00 45.56 2.59
3505 4530 3.200165 CCCTAAGCTAAAAGCACCCTACT 59.800 47.826 1.22 0.00 45.56 2.57
3506 4531 3.199289 TCCCTAAGCTAAAAGCACCCTAC 59.801 47.826 1.22 0.00 45.56 3.18
3507 4532 3.456842 TCCCTAAGCTAAAAGCACCCTA 58.543 45.455 1.22 0.00 45.56 3.53
3508 4533 2.275466 TCCCTAAGCTAAAAGCACCCT 58.725 47.619 1.22 0.00 45.56 4.34
3509 4534 2.801077 TCCCTAAGCTAAAAGCACCC 57.199 50.000 1.22 0.00 45.56 4.61
3510 4535 5.297029 CACTTATCCCTAAGCTAAAAGCACC 59.703 44.000 1.22 0.00 45.56 5.01
3511 4536 5.880887 ACACTTATCCCTAAGCTAAAAGCAC 59.119 40.000 1.22 0.00 45.56 4.40
3512 4537 5.880332 CACACTTATCCCTAAGCTAAAAGCA 59.120 40.000 1.22 0.00 45.56 3.91
3513 4538 6.113411 TCACACTTATCCCTAAGCTAAAAGC 58.887 40.000 0.00 0.00 42.84 3.51
3514 4539 8.207545 AGATCACACTTATCCCTAAGCTAAAAG 58.792 37.037 0.00 0.00 38.33 2.27
3515 4540 7.987458 CAGATCACACTTATCCCTAAGCTAAAA 59.013 37.037 0.00 0.00 38.33 1.52
3516 4541 7.125811 ACAGATCACACTTATCCCTAAGCTAAA 59.874 37.037 0.00 0.00 38.33 1.85
3517 4542 6.611642 ACAGATCACACTTATCCCTAAGCTAA 59.388 38.462 0.00 0.00 38.33 3.09
3518 4543 6.136857 ACAGATCACACTTATCCCTAAGCTA 58.863 40.000 0.00 0.00 38.33 3.32
3519 4544 4.965532 ACAGATCACACTTATCCCTAAGCT 59.034 41.667 0.00 0.00 38.33 3.74
3520 4545 5.283457 ACAGATCACACTTATCCCTAAGC 57.717 43.478 0.00 0.00 38.33 3.09
3521 4546 7.589958 ACTACAGATCACACTTATCCCTAAG 57.410 40.000 0.00 0.00 40.25 2.18
3522 4547 7.973048 AACTACAGATCACACTTATCCCTAA 57.027 36.000 0.00 0.00 0.00 2.69
3523 4548 7.973048 AAACTACAGATCACACTTATCCCTA 57.027 36.000 0.00 0.00 0.00 3.53
3524 4549 6.875972 AAACTACAGATCACACTTATCCCT 57.124 37.500 0.00 0.00 0.00 4.20
3525 4550 7.783042 ACTAAACTACAGATCACACTTATCCC 58.217 38.462 0.00 0.00 0.00 3.85
3526 4551 9.654663 AAACTAAACTACAGATCACACTTATCC 57.345 33.333 0.00 0.00 0.00 2.59
3531 4556 8.827677 GTGAAAAACTAAACTACAGATCACACT 58.172 33.333 0.00 0.00 34.95 3.55
3579 5042 8.247666 TGAACTCATGTCTCATCTGATTAGAT 57.752 34.615 4.95 0.00 44.45 1.98
3580 5043 7.651027 TGAACTCATGTCTCATCTGATTAGA 57.349 36.000 0.00 0.00 37.35 2.10
3596 5059 5.359860 TCTCCGTGTATACACATGAACTCAT 59.640 40.000 30.17 0.00 46.75 2.90
3597 5060 4.703093 TCTCCGTGTATACACATGAACTCA 59.297 41.667 30.17 11.03 46.75 3.41
3598 5061 5.035443 GTCTCCGTGTATACACATGAACTC 58.965 45.833 30.17 16.08 46.75 3.01
3599 5062 4.438336 CGTCTCCGTGTATACACATGAACT 60.438 45.833 30.17 0.00 46.75 3.01
3600 5063 3.789756 CGTCTCCGTGTATACACATGAAC 59.210 47.826 30.17 21.30 46.75 3.18
3602 5065 3.272581 TCGTCTCCGTGTATACACATGA 58.727 45.455 30.17 24.06 46.75 3.07
3603 5066 3.618698 CTCGTCTCCGTGTATACACATG 58.381 50.000 30.17 21.71 46.75 3.21
3605 5068 1.399440 GCTCGTCTCCGTGTATACACA 59.601 52.381 30.17 14.71 46.75 3.72
3606 5069 1.268437 GGCTCGTCTCCGTGTATACAC 60.268 57.143 23.53 23.53 43.15 2.90
3608 5071 1.307097 AGGCTCGTCTCCGTGTATAC 58.693 55.000 0.00 0.00 35.01 1.47
3629 5107 9.817365 CCATTTACGATCAGATTATGAAATCAC 57.183 33.333 0.00 0.00 43.44 3.06
3635 5113 6.114187 AGCCCATTTACGATCAGATTATGA 57.886 37.500 0.00 0.00 43.70 2.15
3637 5115 6.772716 ACAAAGCCCATTTACGATCAGATTAT 59.227 34.615 0.00 0.00 0.00 1.28
3659 5149 0.390124 AAGCCCGTTCTCGTACACAA 59.610 50.000 0.00 0.00 35.01 3.33
3684 5591 2.851263 AACCATCTACGTTCTTGCCA 57.149 45.000 0.00 0.00 0.00 4.92
3685 5592 4.933400 TCTTAAACCATCTACGTTCTTGCC 59.067 41.667 0.00 0.00 0.00 4.52
3686 5593 6.535508 AGATCTTAAACCATCTACGTTCTTGC 59.464 38.462 0.00 0.00 0.00 4.01
3692 5599 4.097437 TGCGAGATCTTAAACCATCTACGT 59.903 41.667 0.00 0.00 29.01 3.57
3696 5603 5.105146 ACTCTTGCGAGATCTTAAACCATCT 60.105 40.000 3.51 0.00 39.74 2.90
3703 5610 6.025749 TCTTTGACTCTTGCGAGATCTTAA 57.974 37.500 3.51 0.00 39.74 1.85
3704 5611 5.644977 TCTTTGACTCTTGCGAGATCTTA 57.355 39.130 3.51 0.00 39.74 2.10
3715 5622 3.225940 CCCTTGGCTTTCTTTGACTCTT 58.774 45.455 0.00 0.00 0.00 2.85
3717 5631 1.889170 CCCCTTGGCTTTCTTTGACTC 59.111 52.381 0.00 0.00 0.00 3.36
3720 5634 0.856982 TCCCCCTTGGCTTTCTTTGA 59.143 50.000 0.00 0.00 0.00 2.69
3721 5635 1.715785 TTCCCCCTTGGCTTTCTTTG 58.284 50.000 0.00 0.00 0.00 2.77
3723 5637 1.483118 CCTTTCCCCCTTGGCTTTCTT 60.483 52.381 0.00 0.00 0.00 2.52
3731 5645 0.963856 GCGTTACCCTTTCCCCCTTG 60.964 60.000 0.00 0.00 0.00 3.61
3737 5651 1.663379 GGGCATGCGTTACCCTTTCC 61.663 60.000 12.44 0.00 40.75 3.13
3738 5652 1.807226 GGGCATGCGTTACCCTTTC 59.193 57.895 12.44 0.00 40.75 2.62
3742 5656 2.895372 CGAGGGCATGCGTTACCC 60.895 66.667 12.44 6.72 44.62 3.69
3743 5657 2.125269 ACGAGGGCATGCGTTACC 60.125 61.111 12.44 7.13 37.48 2.85
3747 5661 0.321298 AAGTTAACGAGGGCATGCGT 60.321 50.000 12.44 0.26 43.39 5.24
3748 5662 0.096976 CAAGTTAACGAGGGCATGCG 59.903 55.000 12.44 0.00 0.00 4.73
3749 5663 0.179163 GCAAGTTAACGAGGGCATGC 60.179 55.000 9.90 9.90 0.00 4.06
3750 5664 1.164411 TGCAAGTTAACGAGGGCATG 58.836 50.000 10.87 0.00 0.00 4.06
3751 5665 2.017049 GATGCAAGTTAACGAGGGCAT 58.983 47.619 21.00 21.00 43.93 4.40
3752 5666 1.448985 GATGCAAGTTAACGAGGGCA 58.551 50.000 15.26 15.26 35.54 5.36
3753 5667 0.733150 GGATGCAAGTTAACGAGGGC 59.267 55.000 0.00 3.68 0.00 5.19
3769 5689 4.380655 CGTCACTTTCTCTAAAGACGGGAT 60.381 45.833 0.00 0.00 44.14 3.85
3775 5695 5.455392 CGTTACCGTCACTTTCTCTAAAGA 58.545 41.667 4.95 0.00 44.14 2.52
3776 5696 4.089636 GCGTTACCGTCACTTTCTCTAAAG 59.910 45.833 0.00 0.00 41.16 1.85
3780 5700 1.338973 TGCGTTACCGTCACTTTCTCT 59.661 47.619 0.00 0.00 36.15 3.10
3781 5701 1.774639 TGCGTTACCGTCACTTTCTC 58.225 50.000 0.00 0.00 36.15 2.87
3782 5702 2.066262 CATGCGTTACCGTCACTTTCT 58.934 47.619 0.00 0.00 36.15 2.52
3783 5703 1.463528 GCATGCGTTACCGTCACTTTC 60.464 52.381 0.00 0.00 36.15 2.62
3784 5704 0.515564 GCATGCGTTACCGTCACTTT 59.484 50.000 0.00 0.00 36.15 2.66
3785 5705 0.320421 AGCATGCGTTACCGTCACTT 60.320 50.000 13.01 0.00 36.15 3.16
3786 5706 0.528924 TAGCATGCGTTACCGTCACT 59.471 50.000 13.01 0.00 36.15 3.41
3787 5707 0.643820 GTAGCATGCGTTACCGTCAC 59.356 55.000 13.01 0.00 36.15 3.67
3788 5708 0.528924 AGTAGCATGCGTTACCGTCA 59.471 50.000 13.01 0.00 36.15 4.35
3789 5709 2.114825 GTAGTAGCATGCGTTACCGTC 58.885 52.381 13.01 0.86 36.15 4.79
3790 5710 1.202336 GGTAGTAGCATGCGTTACCGT 60.202 52.381 23.24 5.75 36.15 4.83
3791 5711 1.484356 GGTAGTAGCATGCGTTACCG 58.516 55.000 23.24 0.00 29.55 4.02
3792 5712 1.066002 TCGGTAGTAGCATGCGTTACC 59.934 52.381 25.65 25.65 29.55 2.85
3793 5713 2.480224 TCGGTAGTAGCATGCGTTAC 57.520 50.000 13.01 15.01 0.00 2.50
3794 5714 3.720949 AATCGGTAGTAGCATGCGTTA 57.279 42.857 13.01 3.37 0.00 3.18
3795 5715 2.596904 AATCGGTAGTAGCATGCGTT 57.403 45.000 13.01 4.42 0.00 4.84
3796 5716 2.596904 AAATCGGTAGTAGCATGCGT 57.403 45.000 13.01 3.63 0.00 5.24
3797 5717 3.123804 AGAAAATCGGTAGTAGCATGCG 58.876 45.455 13.01 0.00 0.00 4.73
3825 5745 3.585732 TCTTTTCCTTGGGATAAGACGGT 59.414 43.478 12.92 0.00 42.05 4.83
3826 5746 4.216411 TCTTTTCCTTGGGATAAGACGG 57.784 45.455 12.92 0.00 42.05 4.79
3836 5756 5.298527 ACGAACCTACTTTTCTTTTCCTTGG 59.701 40.000 0.00 0.00 0.00 3.61
3852 5772 4.050553 CAACGTACTCCAAAACGAACCTA 58.949 43.478 1.45 0.00 41.55 3.08
3858 5797 2.720590 CGCATCAACGTACTCCAAAACG 60.721 50.000 0.00 0.00 44.47 3.60
3888 5830 1.134670 AGGCGGAAATTCGGAAGAGAG 60.135 52.381 4.67 0.00 43.69 3.20
3891 5833 1.024579 GCAGGCGGAAATTCGGAAGA 61.025 55.000 4.67 0.00 39.20 2.87
3929 5871 4.609691 TTGGTTTGTTCTTCAACGAGTC 57.390 40.909 0.00 0.00 35.61 3.36
3930 5872 5.182380 TCTTTTGGTTTGTTCTTCAACGAGT 59.818 36.000 0.00 0.00 35.61 4.18
3931 5873 5.636837 TCTTTTGGTTTGTTCTTCAACGAG 58.363 37.500 0.00 0.00 35.61 4.18
3932 5874 5.630661 TCTTTTGGTTTGTTCTTCAACGA 57.369 34.783 0.00 0.00 35.61 3.85
3933 5875 5.276348 GCATCTTTTGGTTTGTTCTTCAACG 60.276 40.000 0.00 0.00 35.61 4.10
3978 5921 2.644992 CCAGCCAAAGTTGTCGCC 59.355 61.111 0.00 0.00 0.00 5.54
4048 5991 2.359900 AGGCGTCTAAAGATTTGCAGG 58.640 47.619 0.00 0.00 0.00 4.85
4056 5999 5.877491 TCAGGATCTATAGGCGTCTAAAGA 58.123 41.667 0.00 0.00 0.00 2.52
4066 6010 5.309638 TCTCGAGTGTTCAGGATCTATAGG 58.690 45.833 13.13 0.00 0.00 2.57
4068 6012 7.502561 TCAAATCTCGAGTGTTCAGGATCTATA 59.497 37.037 13.13 0.00 0.00 1.31
4072 6016 4.748892 TCAAATCTCGAGTGTTCAGGATC 58.251 43.478 13.13 0.00 0.00 3.36
4073 6017 4.808414 TCAAATCTCGAGTGTTCAGGAT 57.192 40.909 13.13 0.00 0.00 3.24
4076 6020 5.406477 TCATGTTCAAATCTCGAGTGTTCAG 59.594 40.000 13.13 5.99 0.00 3.02
4080 6024 4.631131 TGTCATGTTCAAATCTCGAGTGT 58.369 39.130 13.13 0.00 0.00 3.55
4082 6026 6.808008 ATTTGTCATGTTCAAATCTCGAGT 57.192 33.333 13.13 0.00 40.13 4.18
4087 6031 9.550406 AACATTCAATTTGTCATGTTCAAATCT 57.450 25.926 21.68 14.02 42.31 2.40
4118 6062 8.592998 CGAGAGTTGACTAATACAAATTACCAC 58.407 37.037 0.00 0.00 0.00 4.16
4124 6068 7.773149 ACTAGCGAGAGTTGACTAATACAAAT 58.227 34.615 0.00 0.00 0.00 2.32
4128 6072 8.397148 ACTAAACTAGCGAGAGTTGACTAATAC 58.603 37.037 0.00 0.00 39.62 1.89
4133 6077 5.462405 CAACTAAACTAGCGAGAGTTGACT 58.538 41.667 16.82 0.92 46.39 3.41
4136 6080 4.557205 ACCAACTAAACTAGCGAGAGTTG 58.443 43.478 15.55 15.55 44.21 3.16
4141 6085 4.491676 TGCTTACCAACTAAACTAGCGAG 58.508 43.478 0.00 0.00 0.00 5.03
4143 6087 5.050972 GCTATGCTTACCAACTAAACTAGCG 60.051 44.000 0.00 0.00 0.00 4.26
4144 6088 5.815740 TGCTATGCTTACCAACTAAACTAGC 59.184 40.000 0.00 0.00 0.00 3.42
4146 6090 8.508875 GTTTTGCTATGCTTACCAACTAAACTA 58.491 33.333 0.00 0.00 0.00 2.24
4151 6095 4.393680 CGGTTTTGCTATGCTTACCAACTA 59.606 41.667 0.00 0.00 0.00 2.24
4164 6108 8.611654 AAATCTAACTAAGAACGGTTTTGCTA 57.388 30.769 0.00 0.00 37.89 3.49
4169 6113 7.143340 GGCAAAAATCTAACTAAGAACGGTTT 58.857 34.615 0.00 0.00 37.89 3.27
4171 6115 5.766174 TGGCAAAAATCTAACTAAGAACGGT 59.234 36.000 0.00 0.00 37.89 4.83
4173 6117 7.129109 TCTGGCAAAAATCTAACTAAGAACG 57.871 36.000 0.00 0.00 37.89 3.95
4179 6123 9.834628 CGTAATTTTCTGGCAAAAATCTAACTA 57.165 29.630 15.64 6.53 37.75 2.24
4181 6125 8.424731 CACGTAATTTTCTGGCAAAAATCTAAC 58.575 33.333 15.64 13.54 37.75 2.34
4184 6128 5.405269 GCACGTAATTTTCTGGCAAAAATCT 59.595 36.000 15.64 10.93 37.75 2.40
4192 6136 1.919918 GCATGCACGTAATTTTCTGGC 59.080 47.619 14.21 0.00 0.00 4.85
4194 6138 3.492421 AGGCATGCACGTAATTTTCTG 57.508 42.857 21.36 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.