Multiple sequence alignment - TraesCS3A01G185100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G185100 chr3A 100.000 2220 0 0 1 2220 216687350 216689569 0.000000e+00 4100
1 TraesCS3A01G185100 chr3A 86.842 304 35 4 1517 1815 685012654 685012957 4.210000e-88 335
2 TraesCS3A01G185100 chr3A 100.000 154 0 0 2489 2642 216689838 216689991 4.300000e-73 285
3 TraesCS3A01G185100 chr7D 96.404 890 25 4 932 1817 600756436 600757322 0.000000e+00 1459
4 TraesCS3A01G185100 chr4A 98.259 402 3 1 1819 2220 25770056 25770453 0.000000e+00 701
5 TraesCS3A01G185100 chr4A 98.933 375 4 0 1817 2191 521896401 521896775 0.000000e+00 671
6 TraesCS3A01G185100 chr4A 99.351 154 1 0 2489 2642 25771001 25771154 2.000000e-71 279
7 TraesCS3A01G185100 chr4A 99.351 154 1 0 2489 2642 705448664 705448817 2.000000e-71 279
8 TraesCS3A01G185100 chr4A 98.701 154 2 0 2489 2642 521897241 521897394 9.320000e-70 274
9 TraesCS3A01G185100 chr3B 98.254 401 4 1 1817 2217 302556252 302556649 0.000000e+00 699
10 TraesCS3A01G185100 chr3B 97.022 403 8 2 1818 2220 801164587 801164985 0.000000e+00 675
11 TraesCS3A01G185100 chr3B 97.906 382 6 1 1839 2220 744042895 744043274 0.000000e+00 660
12 TraesCS3A01G185100 chr3B 96.725 397 6 3 1818 2214 558549924 558550313 0.000000e+00 654
13 TraesCS3A01G185100 chr3B 100.000 154 0 0 2489 2642 302561341 302561494 4.300000e-73 285
14 TraesCS3A01G185100 chr3B 99.351 154 1 0 2489 2642 558550726 558550879 2.000000e-71 279
15 TraesCS3A01G185100 chr3B 98.701 154 2 0 2489 2642 801168575 801168728 9.320000e-70 274
16 TraesCS3A01G185100 chr5A 96.829 410 11 1 1811 2220 118361736 118361329 0.000000e+00 684
17 TraesCS3A01G185100 chr5A 98.701 154 2 0 2489 2642 118360546 118360393 9.320000e-70 274
18 TraesCS3A01G185100 chr2B 96.163 417 11 4 1805 2220 133950040 133950452 0.000000e+00 676
19 TraesCS3A01G185100 chr2B 87.421 159 19 1 692 849 94097931 94097773 5.810000e-42 182
20 TraesCS3A01G185100 chr6A 97.037 405 5 2 1816 2220 2350499 2350896 0.000000e+00 675
21 TraesCS3A01G185100 chr6A 77.734 503 99 11 1319 1813 608442327 608442824 1.990000e-76 296
22 TraesCS3A01G185100 chr6A 77.734 503 99 11 1319 1813 608468613 608469110 1.990000e-76 296
23 TraesCS3A01G185100 chr6A 100.000 154 0 0 2489 2642 2351509 2351662 4.300000e-73 285
24 TraesCS3A01G185100 chr6A 86.755 151 17 2 702 849 534656052 534655902 5.850000e-37 165
25 TraesCS3A01G185100 chr7A 76.026 780 155 24 1052 1813 11671788 11671023 2.480000e-100 375
26 TraesCS3A01G185100 chr3D 87.658 316 34 2 1507 1817 548019039 548019354 1.930000e-96 363
27 TraesCS3A01G185100 chr3D 88.889 144 15 1 692 834 591373626 591373769 2.700000e-40 176
28 TraesCS3A01G185100 chrUn 77.734 503 99 11 1319 1813 317889138 317889635 1.990000e-76 296
29 TraesCS3A01G185100 chrUn 77.734 503 99 11 1319 1813 317892637 317893134 1.990000e-76 296
30 TraesCS3A01G185100 chrUn 72.748 866 201 28 971 1813 323495624 323494771 2.610000e-65 259
31 TraesCS3A01G185100 chr7B 98.701 154 2 0 2489 2642 49572233 49572080 9.320000e-70 274
32 TraesCS3A01G185100 chr7B 87.417 151 16 2 702 849 534547839 534547989 1.260000e-38 171
33 TraesCS3A01G185100 chr1D 87.117 163 19 2 692 852 271864756 271864594 1.620000e-42 183
34 TraesCS3A01G185100 chr1D 86.538 156 19 2 695 849 40498786 40498632 1.260000e-38 171
35 TraesCS3A01G185100 chr2D 88.732 142 15 1 694 834 104265135 104265276 3.500000e-39 172
36 TraesCS3A01G185100 chr6B 87.417 151 16 3 702 849 255980387 255980537 1.260000e-38 171
37 TraesCS3A01G185100 chr1A 86.755 151 17 2 702 849 566089366 566089516 5.850000e-37 165


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G185100 chr3A 216687350 216689991 2641 False 2192.5 4100 100.0000 1 2642 2 chr3A.!!$F2 2641
1 TraesCS3A01G185100 chr7D 600756436 600757322 886 False 1459.0 1459 96.4040 932 1817 1 chr7D.!!$F1 885
2 TraesCS3A01G185100 chr4A 25770056 25771154 1098 False 490.0 701 98.8050 1819 2642 2 chr4A.!!$F2 823
3 TraesCS3A01G185100 chr4A 521896401 521897394 993 False 472.5 671 98.8170 1817 2642 2 chr4A.!!$F3 825
4 TraesCS3A01G185100 chr3B 801164587 801168728 4141 False 474.5 675 97.8615 1818 2642 2 chr3B.!!$F5 824
5 TraesCS3A01G185100 chr3B 558549924 558550879 955 False 466.5 654 98.0380 1818 2642 2 chr3B.!!$F4 824
6 TraesCS3A01G185100 chr5A 118360393 118361736 1343 True 479.0 684 97.7650 1811 2642 2 chr5A.!!$R1 831
7 TraesCS3A01G185100 chr6A 2350499 2351662 1163 False 480.0 675 98.5185 1816 2642 2 chr6A.!!$F3 826
8 TraesCS3A01G185100 chr7A 11671023 11671788 765 True 375.0 375 76.0260 1052 1813 1 chr7A.!!$R1 761
9 TraesCS3A01G185100 chrUn 317889138 317893134 3996 False 296.0 296 77.7340 1319 1813 2 chrUn.!!$F1 494
10 TraesCS3A01G185100 chrUn 323494771 323495624 853 True 259.0 259 72.7480 971 1813 1 chrUn.!!$R1 842


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
538 539 0.032267 GAAACCCTATCTCGGCTCCG 59.968 60.0 1.14 1.14 41.35 4.63 F
744 745 0.108396 CCGGTGATGCCCATGTCATA 59.892 55.0 0.00 0.00 0.00 2.15 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1572 5080 1.258982 GACTCATCCGTTAATGCAGCG 59.741 52.381 0.00 0.0 0.00 5.18 R
1738 5250 2.642700 GAACACGGCGCAACCAAT 59.357 55.556 10.83 0.0 39.03 3.16 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.839310 CAGCTACTATATAAGAAAGCACCAAT 57.161 34.615 0.00 0.00 39.03 3.16
26 27 9.929180 CAGCTACTATATAAGAAAGCACCAATA 57.071 33.333 0.00 0.00 39.03 1.90
28 29 8.874816 GCTACTATATAAGAAAGCACCAATAGC 58.125 37.037 0.00 0.00 37.55 2.97
36 37 7.938140 AAGAAAGCACCAATAGCTATAACAA 57.062 32.000 6.68 0.00 42.53 2.83
37 38 7.559590 AGAAAGCACCAATAGCTATAACAAG 57.440 36.000 6.68 0.00 42.53 3.16
38 39 7.338710 AGAAAGCACCAATAGCTATAACAAGA 58.661 34.615 6.68 0.00 42.53 3.02
39 40 7.829211 AGAAAGCACCAATAGCTATAACAAGAA 59.171 33.333 6.68 0.00 42.53 2.52
40 41 6.927294 AGCACCAATAGCTATAACAAGAAC 57.073 37.500 6.68 0.00 41.32 3.01
41 42 5.823045 AGCACCAATAGCTATAACAAGAACC 59.177 40.000 6.68 0.00 41.32 3.62
42 43 5.588648 GCACCAATAGCTATAACAAGAACCA 59.411 40.000 6.68 0.00 0.00 3.67
43 44 6.094881 GCACCAATAGCTATAACAAGAACCAA 59.905 38.462 6.68 0.00 0.00 3.67
44 45 7.362574 GCACCAATAGCTATAACAAGAACCAAA 60.363 37.037 6.68 0.00 0.00 3.28
45 46 8.519526 CACCAATAGCTATAACAAGAACCAAAA 58.480 33.333 6.68 0.00 0.00 2.44
46 47 9.084533 ACCAATAGCTATAACAAGAACCAAAAA 57.915 29.630 6.68 0.00 0.00 1.94
51 52 8.293699 AGCTATAACAAGAACCAAAAATAGGG 57.706 34.615 0.00 0.00 0.00 3.53
52 53 8.113462 AGCTATAACAAGAACCAAAAATAGGGA 58.887 33.333 0.00 0.00 0.00 4.20
53 54 8.914011 GCTATAACAAGAACCAAAAATAGGGAT 58.086 33.333 0.00 0.00 0.00 3.85
56 57 7.610580 AACAAGAACCAAAAATAGGGATTGA 57.389 32.000 0.00 0.00 0.00 2.57
57 58 7.232118 ACAAGAACCAAAAATAGGGATTGAG 57.768 36.000 0.00 0.00 0.00 3.02
58 59 5.921962 AGAACCAAAAATAGGGATTGAGC 57.078 39.130 0.00 0.00 0.00 4.26
59 60 4.711846 AGAACCAAAAATAGGGATTGAGCC 59.288 41.667 0.00 0.00 0.00 4.70
60 61 4.059773 ACCAAAAATAGGGATTGAGCCA 57.940 40.909 0.00 0.00 0.00 4.75
61 62 4.424842 ACCAAAAATAGGGATTGAGCCAA 58.575 39.130 0.00 0.00 0.00 4.52
62 63 4.843516 ACCAAAAATAGGGATTGAGCCAAA 59.156 37.500 0.00 0.00 0.00 3.28
63 64 5.178061 CCAAAAATAGGGATTGAGCCAAAC 58.822 41.667 0.00 0.00 0.00 2.93
64 65 5.279910 CCAAAAATAGGGATTGAGCCAAACA 60.280 40.000 0.00 0.00 0.00 2.83
65 66 6.229733 CAAAAATAGGGATTGAGCCAAACAA 58.770 36.000 0.00 0.00 0.00 2.83
66 67 6.432403 AAAATAGGGATTGAGCCAAACAAA 57.568 33.333 0.00 0.00 0.00 2.83
67 68 5.665916 AATAGGGATTGAGCCAAACAAAG 57.334 39.130 0.00 0.00 0.00 2.77
68 69 1.620323 AGGGATTGAGCCAAACAAAGC 59.380 47.619 0.00 0.00 0.00 3.51
69 70 1.669795 GGGATTGAGCCAAACAAAGCG 60.670 52.381 0.00 0.00 0.00 4.68
70 71 1.269448 GGATTGAGCCAAACAAAGCGA 59.731 47.619 0.00 0.00 0.00 4.93
71 72 2.589014 GATTGAGCCAAACAAAGCGAG 58.411 47.619 0.00 0.00 0.00 5.03
72 73 0.667993 TTGAGCCAAACAAAGCGAGG 59.332 50.000 0.00 0.00 0.00 4.63
73 74 1.081175 GAGCCAAACAAAGCGAGGC 60.081 57.895 0.00 0.00 45.54 4.70
74 75 2.429069 GCCAAACAAAGCGAGGCG 60.429 61.111 0.00 0.00 35.42 5.52
75 76 3.030652 CCAAACAAAGCGAGGCGT 58.969 55.556 0.00 0.00 0.00 5.68
76 77 1.082104 CCAAACAAAGCGAGGCGTC 60.082 57.895 0.00 0.00 0.00 5.19
77 78 1.507141 CCAAACAAAGCGAGGCGTCT 61.507 55.000 4.69 0.00 0.00 4.18
78 79 0.110644 CAAACAAAGCGAGGCGTCTC 60.111 55.000 7.05 7.05 36.69 3.36
79 80 1.228657 AAACAAAGCGAGGCGTCTCC 61.229 55.000 12.25 4.34 36.70 3.71
80 81 3.181967 CAAAGCGAGGCGTCTCCG 61.182 66.667 12.25 7.97 40.77 4.63
81 82 3.681835 AAAGCGAGGCGTCTCCGT 61.682 61.111 12.25 0.00 40.77 4.69
82 83 3.222354 AAAGCGAGGCGTCTCCGTT 62.222 57.895 12.25 6.18 40.77 4.44
83 84 3.628280 AAGCGAGGCGTCTCCGTTC 62.628 63.158 12.25 0.00 40.77 3.95
85 86 3.441290 CGAGGCGTCTCCGTTCCT 61.441 66.667 12.25 0.00 40.77 3.36
86 87 2.490685 GAGGCGTCTCCGTTCCTC 59.509 66.667 5.50 0.00 40.77 3.71
87 88 2.282958 AGGCGTCTCCGTTCCTCA 60.283 61.111 0.00 0.00 40.77 3.86
88 89 1.668101 GAGGCGTCTCCGTTCCTCAT 61.668 60.000 5.50 0.00 40.80 2.90
89 90 1.227002 GGCGTCTCCGTTCCTCATC 60.227 63.158 0.00 0.00 36.15 2.92
90 91 1.227002 GCGTCTCCGTTCCTCATCC 60.227 63.158 0.00 0.00 36.15 3.51
91 92 1.668101 GCGTCTCCGTTCCTCATCCT 61.668 60.000 0.00 0.00 36.15 3.24
92 93 0.382515 CGTCTCCGTTCCTCATCCTC 59.617 60.000 0.00 0.00 0.00 3.71
93 94 0.747852 GTCTCCGTTCCTCATCCTCC 59.252 60.000 0.00 0.00 0.00 4.30
94 95 0.397254 TCTCCGTTCCTCATCCTCCC 60.397 60.000 0.00 0.00 0.00 4.30
95 96 0.397816 CTCCGTTCCTCATCCTCCCT 60.398 60.000 0.00 0.00 0.00 4.20
96 97 0.397254 TCCGTTCCTCATCCTCCCTC 60.397 60.000 0.00 0.00 0.00 4.30
97 98 1.403687 CCGTTCCTCATCCTCCCTCC 61.404 65.000 0.00 0.00 0.00 4.30
98 99 1.403687 CGTTCCTCATCCTCCCTCCC 61.404 65.000 0.00 0.00 0.00 4.30
99 100 1.057275 GTTCCTCATCCTCCCTCCCC 61.057 65.000 0.00 0.00 0.00 4.81
100 101 1.536559 TTCCTCATCCTCCCTCCCCA 61.537 60.000 0.00 0.00 0.00 4.96
101 102 1.768077 CCTCATCCTCCCTCCCCAC 60.768 68.421 0.00 0.00 0.00 4.61
102 103 2.041922 TCATCCTCCCTCCCCACG 60.042 66.667 0.00 0.00 0.00 4.94
103 104 3.866582 CATCCTCCCTCCCCACGC 61.867 72.222 0.00 0.00 0.00 5.34
126 127 3.744719 CCGGAAGACGTCGCCAGA 61.745 66.667 23.93 0.00 42.24 3.86
127 128 2.504244 CGGAAGACGTCGCCAGAC 60.504 66.667 23.93 8.05 43.72 3.51
138 139 2.659610 GCCAGACGAAGCCTGAGT 59.340 61.111 0.00 0.00 33.65 3.41
139 140 1.739562 GCCAGACGAAGCCTGAGTG 60.740 63.158 0.00 0.00 33.65 3.51
140 141 1.079543 CCAGACGAAGCCTGAGTGG 60.080 63.158 0.00 0.00 39.35 4.00
149 150 4.742201 CCTGAGTGGCCGACGGTG 62.742 72.222 16.73 0.00 0.00 4.94
150 151 4.742201 CTGAGTGGCCGACGGTGG 62.742 72.222 16.73 0.00 0.00 4.61
162 163 4.619227 CGGTGGTGGCGTGGTCTT 62.619 66.667 0.00 0.00 0.00 3.01
163 164 2.203294 GGTGGTGGCGTGGTCTTT 60.203 61.111 0.00 0.00 0.00 2.52
164 165 2.258726 GGTGGTGGCGTGGTCTTTC 61.259 63.158 0.00 0.00 0.00 2.62
165 166 2.112297 TGGTGGCGTGGTCTTTCC 59.888 61.111 0.00 0.00 0.00 3.13
166 167 2.430367 GGTGGCGTGGTCTTTCCT 59.570 61.111 0.00 0.00 37.07 3.36
167 168 1.671379 GGTGGCGTGGTCTTTCCTC 60.671 63.158 0.00 0.00 37.07 3.71
171 172 2.809601 CGTGGTCTTTCCTCGCGG 60.810 66.667 6.13 0.00 44.23 6.46
172 173 2.654877 GTGGTCTTTCCTCGCGGA 59.345 61.111 6.13 0.00 37.60 5.54
173 174 1.218316 GTGGTCTTTCCTCGCGGAT 59.782 57.895 6.13 0.00 39.58 4.18
174 175 0.391263 GTGGTCTTTCCTCGCGGATT 60.391 55.000 6.13 0.00 39.58 3.01
175 176 0.323629 TGGTCTTTCCTCGCGGATTT 59.676 50.000 6.13 0.00 39.58 2.17
176 177 1.007580 GGTCTTTCCTCGCGGATTTC 58.992 55.000 6.13 0.00 39.58 2.17
177 178 1.674817 GGTCTTTCCTCGCGGATTTCA 60.675 52.381 6.13 0.00 39.58 2.69
178 179 2.073816 GTCTTTCCTCGCGGATTTCAA 58.926 47.619 6.13 0.00 39.58 2.69
179 180 2.094417 GTCTTTCCTCGCGGATTTCAAG 59.906 50.000 6.13 0.00 39.58 3.02
180 181 1.398390 CTTTCCTCGCGGATTTCAAGG 59.602 52.381 6.13 3.41 39.58 3.61
181 182 0.611200 TTCCTCGCGGATTTCAAGGA 59.389 50.000 6.13 6.28 39.58 3.36
182 183 0.830648 TCCTCGCGGATTTCAAGGAT 59.169 50.000 6.13 0.00 33.30 3.24
183 184 2.036387 TCCTCGCGGATTTCAAGGATA 58.964 47.619 6.13 0.00 33.30 2.59
184 185 2.632996 TCCTCGCGGATTTCAAGGATAT 59.367 45.455 6.13 0.00 33.30 1.63
185 186 2.738846 CCTCGCGGATTTCAAGGATATG 59.261 50.000 6.13 0.00 0.00 1.78
186 187 3.393800 CTCGCGGATTTCAAGGATATGT 58.606 45.455 6.13 0.00 0.00 2.29
187 188 3.130633 TCGCGGATTTCAAGGATATGTG 58.869 45.455 6.13 0.00 0.00 3.21
188 189 2.224079 CGCGGATTTCAAGGATATGTGG 59.776 50.000 0.00 0.00 0.00 4.17
189 190 2.554032 GCGGATTTCAAGGATATGTGGG 59.446 50.000 0.00 0.00 0.00 4.61
190 191 2.554032 CGGATTTCAAGGATATGTGGGC 59.446 50.000 0.00 0.00 0.00 5.36
191 192 2.554032 GGATTTCAAGGATATGTGGGCG 59.446 50.000 0.00 0.00 0.00 6.13
192 193 2.051334 TTTCAAGGATATGTGGGCGG 57.949 50.000 0.00 0.00 0.00 6.13
193 194 0.916086 TTCAAGGATATGTGGGCGGT 59.084 50.000 0.00 0.00 0.00 5.68
194 195 1.796017 TCAAGGATATGTGGGCGGTA 58.204 50.000 0.00 0.00 0.00 4.02
195 196 1.691976 TCAAGGATATGTGGGCGGTAG 59.308 52.381 0.00 0.00 0.00 3.18
196 197 0.396811 AAGGATATGTGGGCGGTAGC 59.603 55.000 0.00 0.00 44.18 3.58
197 198 0.471971 AGGATATGTGGGCGGTAGCT 60.472 55.000 0.00 0.00 44.37 3.32
198 199 0.037232 GGATATGTGGGCGGTAGCTC 60.037 60.000 0.00 0.00 46.24 4.09
199 200 0.037232 GATATGTGGGCGGTAGCTCC 60.037 60.000 0.00 0.00 45.20 4.70
200 201 1.481056 ATATGTGGGCGGTAGCTCCC 61.481 60.000 13.25 13.25 45.20 4.30
212 213 2.420890 GCTCCCAGCGAGATCCAG 59.579 66.667 0.00 0.00 41.63 3.86
213 214 2.420890 CTCCCAGCGAGATCCAGC 59.579 66.667 2.10 2.10 41.63 4.85
214 215 3.496875 CTCCCAGCGAGATCCAGCG 62.497 68.421 4.63 0.74 41.63 5.18
215 216 4.598894 CCCAGCGAGATCCAGCGG 62.599 72.222 4.63 8.47 38.61 5.52
221 222 4.959596 GAGATCCAGCGGCGCTCC 62.960 72.222 34.22 20.36 36.40 4.70
234 235 3.896133 GCTCCGGGCATGCATGTG 61.896 66.667 26.79 16.70 41.35 3.21
235 236 3.896133 CTCCGGGCATGCATGTGC 61.896 66.667 26.79 15.96 44.31 4.57
241 242 2.587753 GCATGCATGTGCCATGGC 60.588 61.111 30.54 30.54 41.18 4.40
242 243 2.279186 CATGCATGTGCCATGGCG 60.279 61.111 30.87 17.94 45.51 5.69
243 244 2.756691 ATGCATGTGCCATGGCGT 60.757 55.556 30.87 17.10 45.51 5.68
244 245 2.777972 ATGCATGTGCCATGGCGTC 61.778 57.895 30.87 25.00 45.51 5.19
245 246 4.197498 GCATGTGCCATGGCGTCC 62.197 66.667 30.87 21.01 45.51 4.79
246 247 2.751036 CATGTGCCATGGCGTCCA 60.751 61.111 30.87 25.58 45.51 4.02
247 248 2.438975 ATGTGCCATGGCGTCCAG 60.439 61.111 30.87 0.00 45.51 3.86
272 273 4.341502 GCGGCAAAGCTCGGCAAA 62.342 61.111 11.18 0.00 0.00 3.68
273 274 2.126734 CGGCAAAGCTCGGCAAAG 60.127 61.111 11.18 0.00 0.00 2.77
274 275 2.259511 GGCAAAGCTCGGCAAAGG 59.740 61.111 11.18 0.00 0.00 3.11
275 276 2.259511 GCAAAGCTCGGCAAAGGG 59.740 61.111 4.80 0.00 0.00 3.95
276 277 2.564721 GCAAAGCTCGGCAAAGGGT 61.565 57.895 4.80 0.00 0.00 4.34
277 278 1.286880 CAAAGCTCGGCAAAGGGTG 59.713 57.895 0.00 0.00 0.00 4.61
278 279 1.903404 AAAGCTCGGCAAAGGGTGG 60.903 57.895 0.00 0.00 0.00 4.61
279 280 2.640581 AAAGCTCGGCAAAGGGTGGT 62.641 55.000 0.00 0.00 0.00 4.16
280 281 3.365265 GCTCGGCAAAGGGTGGTG 61.365 66.667 0.00 0.00 0.00 4.17
281 282 2.672996 CTCGGCAAAGGGTGGTGG 60.673 66.667 0.00 0.00 0.00 4.61
282 283 4.278513 TCGGCAAAGGGTGGTGGG 62.279 66.667 0.00 0.00 0.00 4.61
303 304 2.749044 CGGCTGCTGCTGGTCATT 60.749 61.111 16.16 0.00 41.67 2.57
304 305 2.882876 GGCTGCTGCTGGTCATTG 59.117 61.111 15.64 0.00 39.59 2.82
305 306 2.707849 GGCTGCTGCTGGTCATTGG 61.708 63.158 15.64 0.00 39.59 3.16
306 307 1.975407 GCTGCTGCTGGTCATTGGT 60.975 57.895 8.53 0.00 36.03 3.67
307 308 1.880894 CTGCTGCTGGTCATTGGTG 59.119 57.895 0.00 0.00 0.00 4.17
308 309 2.209064 CTGCTGCTGGTCATTGGTGC 62.209 60.000 0.00 0.00 0.00 5.01
309 310 2.270257 GCTGCTGGTCATTGGTGCA 61.270 57.895 0.00 0.00 0.00 4.57
310 311 1.601419 GCTGCTGGTCATTGGTGCAT 61.601 55.000 0.00 0.00 33.02 3.96
311 312 0.454600 CTGCTGGTCATTGGTGCATC 59.545 55.000 0.00 0.00 33.02 3.91
312 313 1.307355 TGCTGGTCATTGGTGCATCG 61.307 55.000 0.00 0.00 0.00 3.84
313 314 1.026182 GCTGGTCATTGGTGCATCGA 61.026 55.000 0.00 0.00 0.00 3.59
314 315 1.012086 CTGGTCATTGGTGCATCGAG 58.988 55.000 0.00 0.00 0.00 4.04
315 316 1.026182 TGGTCATTGGTGCATCGAGC 61.026 55.000 0.00 0.00 45.96 5.03
339 340 4.875713 GGCGGGATGGGCGTTGAT 62.876 66.667 0.00 0.00 0.00 2.57
340 341 3.585990 GCGGGATGGGCGTTGATG 61.586 66.667 0.00 0.00 0.00 3.07
341 342 2.901840 CGGGATGGGCGTTGATGG 60.902 66.667 0.00 0.00 0.00 3.51
342 343 2.519302 GGGATGGGCGTTGATGGG 60.519 66.667 0.00 0.00 0.00 4.00
343 344 2.519302 GGATGGGCGTTGATGGGG 60.519 66.667 0.00 0.00 0.00 4.96
344 345 2.519302 GATGGGCGTTGATGGGGG 60.519 66.667 0.00 0.00 0.00 5.40
345 346 3.346734 ATGGGCGTTGATGGGGGT 61.347 61.111 0.00 0.00 0.00 4.95
346 347 3.660422 ATGGGCGTTGATGGGGGTG 62.660 63.158 0.00 0.00 0.00 4.61
347 348 4.041762 GGGCGTTGATGGGGGTGA 62.042 66.667 0.00 0.00 0.00 4.02
348 349 2.275418 GGCGTTGATGGGGGTGAT 59.725 61.111 0.00 0.00 0.00 3.06
349 350 2.120909 GGCGTTGATGGGGGTGATG 61.121 63.158 0.00 0.00 0.00 3.07
350 351 2.120909 GCGTTGATGGGGGTGATGG 61.121 63.158 0.00 0.00 0.00 3.51
351 352 1.607071 CGTTGATGGGGGTGATGGA 59.393 57.895 0.00 0.00 0.00 3.41
352 353 0.464373 CGTTGATGGGGGTGATGGAG 60.464 60.000 0.00 0.00 0.00 3.86
353 354 0.625849 GTTGATGGGGGTGATGGAGT 59.374 55.000 0.00 0.00 0.00 3.85
354 355 0.625316 TTGATGGGGGTGATGGAGTG 59.375 55.000 0.00 0.00 0.00 3.51
355 356 1.152881 GATGGGGGTGATGGAGTGC 60.153 63.158 0.00 0.00 0.00 4.40
356 357 2.947938 GATGGGGGTGATGGAGTGCG 62.948 65.000 0.00 0.00 0.00 5.34
357 358 3.717294 GGGGGTGATGGAGTGCGT 61.717 66.667 0.00 0.00 0.00 5.24
358 359 2.436646 GGGGTGATGGAGTGCGTG 60.437 66.667 0.00 0.00 0.00 5.34
359 360 2.436646 GGGTGATGGAGTGCGTGG 60.437 66.667 0.00 0.00 0.00 4.94
360 361 3.127533 GGTGATGGAGTGCGTGGC 61.128 66.667 0.00 0.00 0.00 5.01
361 362 3.490759 GTGATGGAGTGCGTGGCG 61.491 66.667 0.00 0.00 0.00 5.69
362 363 4.758251 TGATGGAGTGCGTGGCGG 62.758 66.667 0.00 0.00 0.00 6.13
363 364 4.760047 GATGGAGTGCGTGGCGGT 62.760 66.667 0.00 0.00 0.00 5.68
364 365 4.329545 ATGGAGTGCGTGGCGGTT 62.330 61.111 0.00 0.00 0.00 4.44
366 367 4.980805 GGAGTGCGTGGCGGTTGA 62.981 66.667 0.00 0.00 0.00 3.18
367 368 2.742372 GAGTGCGTGGCGGTTGAT 60.742 61.111 0.00 0.00 0.00 2.57
368 369 2.740714 GAGTGCGTGGCGGTTGATC 61.741 63.158 0.00 0.00 0.00 2.92
369 370 3.799755 GTGCGTGGCGGTTGATCC 61.800 66.667 0.00 0.00 0.00 3.36
386 387 2.124983 CGGGAGGTGCATGGTCTG 60.125 66.667 0.00 0.00 0.00 3.51
387 388 2.959484 CGGGAGGTGCATGGTCTGT 61.959 63.158 0.00 0.00 0.00 3.41
388 389 1.078143 GGGAGGTGCATGGTCTGTC 60.078 63.158 0.00 0.00 0.00 3.51
389 390 1.078143 GGAGGTGCATGGTCTGTCC 60.078 63.158 0.00 0.00 0.00 4.02
390 391 1.557269 GGAGGTGCATGGTCTGTCCT 61.557 60.000 0.00 0.00 35.24 3.85
391 392 0.107945 GAGGTGCATGGTCTGTCCTC 60.108 60.000 0.00 0.00 39.23 3.71
392 393 0.546267 AGGTGCATGGTCTGTCCTCT 60.546 55.000 0.00 0.00 37.07 3.69
393 394 0.392193 GGTGCATGGTCTGTCCTCTG 60.392 60.000 0.00 0.00 37.07 3.35
394 395 0.392193 GTGCATGGTCTGTCCTCTGG 60.392 60.000 0.00 0.00 37.07 3.86
395 396 1.451028 GCATGGTCTGTCCTCTGGC 60.451 63.158 0.00 0.00 37.07 4.85
396 397 1.908340 GCATGGTCTGTCCTCTGGCT 61.908 60.000 0.00 0.00 37.07 4.75
397 398 1.489481 CATGGTCTGTCCTCTGGCTA 58.511 55.000 0.00 0.00 37.07 3.93
398 399 2.045524 CATGGTCTGTCCTCTGGCTAT 58.954 52.381 0.00 0.00 37.07 2.97
399 400 1.489481 TGGTCTGTCCTCTGGCTATG 58.511 55.000 0.00 0.00 37.07 2.23
400 401 0.105778 GGTCTGTCCTCTGGCTATGC 59.894 60.000 0.00 0.00 0.00 3.14
401 402 1.118838 GTCTGTCCTCTGGCTATGCT 58.881 55.000 0.00 0.00 0.00 3.79
402 403 1.484240 GTCTGTCCTCTGGCTATGCTT 59.516 52.381 0.00 0.00 0.00 3.91
403 404 1.483827 TCTGTCCTCTGGCTATGCTTG 59.516 52.381 0.00 0.00 0.00 4.01
404 405 0.543277 TGTCCTCTGGCTATGCTTGG 59.457 55.000 0.00 0.00 0.00 3.61
405 406 0.179034 GTCCTCTGGCTATGCTTGGG 60.179 60.000 0.00 0.00 0.00 4.12
406 407 1.150081 CCTCTGGCTATGCTTGGGG 59.850 63.158 0.00 0.00 0.00 4.96
407 408 1.348008 CCTCTGGCTATGCTTGGGGA 61.348 60.000 0.00 0.00 0.00 4.81
408 409 0.769873 CTCTGGCTATGCTTGGGGAT 59.230 55.000 0.00 0.00 0.00 3.85
409 410 0.475475 TCTGGCTATGCTTGGGGATG 59.525 55.000 0.00 0.00 0.00 3.51
410 411 0.538977 CTGGCTATGCTTGGGGATGG 60.539 60.000 0.00 0.00 0.00 3.51
411 412 0.992970 TGGCTATGCTTGGGGATGGA 60.993 55.000 0.00 0.00 0.00 3.41
412 413 0.407139 GGCTATGCTTGGGGATGGAT 59.593 55.000 0.00 0.00 0.00 3.41
413 414 1.615384 GGCTATGCTTGGGGATGGATC 60.615 57.143 0.00 0.00 0.00 3.36
414 415 1.947678 GCTATGCTTGGGGATGGATCG 60.948 57.143 0.00 0.00 0.00 3.69
415 416 1.349026 CTATGCTTGGGGATGGATCGT 59.651 52.381 0.00 0.00 0.00 3.73
416 417 0.109342 ATGCTTGGGGATGGATCGTC 59.891 55.000 0.00 0.00 0.00 4.20
417 418 1.227973 GCTTGGGGATGGATCGTCC 60.228 63.158 7.13 7.13 38.72 4.79
428 429 1.338020 TGGATCGTCCAGTCATGATCG 59.662 52.381 0.00 0.05 42.67 3.69
429 430 1.336332 GGATCGTCCAGTCATGATCGG 60.336 57.143 0.00 2.53 39.03 4.18
430 431 0.676184 ATCGTCCAGTCATGATCGGG 59.324 55.000 12.13 9.83 0.00 5.14
431 432 1.592669 CGTCCAGTCATGATCGGGC 60.593 63.158 12.13 9.97 0.00 6.13
432 433 1.592669 GTCCAGTCATGATCGGGCG 60.593 63.158 12.13 0.00 0.00 6.13
433 434 2.280389 CCAGTCATGATCGGGCGG 60.280 66.667 0.00 0.00 0.00 6.13
434 435 2.969238 CAGTCATGATCGGGCGGC 60.969 66.667 0.00 0.00 0.00 6.53
435 436 4.241555 AGTCATGATCGGGCGGCC 62.242 66.667 20.04 20.04 0.00 6.13
436 437 4.241555 GTCATGATCGGGCGGCCT 62.242 66.667 27.04 8.20 0.00 5.19
437 438 4.240103 TCATGATCGGGCGGCCTG 62.240 66.667 27.04 22.11 0.00 4.85
438 439 4.240103 CATGATCGGGCGGCCTGA 62.240 66.667 31.31 31.31 43.71 3.86
439 440 4.241555 ATGATCGGGCGGCCTGAC 62.242 66.667 31.77 23.65 42.23 3.51
446 447 4.021925 GGCGGCCTGACACCTTCT 62.022 66.667 12.87 0.00 0.00 2.85
447 448 2.435059 GCGGCCTGACACCTTCTC 60.435 66.667 0.00 0.00 0.00 2.87
448 449 2.125912 CGGCCTGACACCTTCTCG 60.126 66.667 0.00 0.00 0.00 4.04
449 450 2.932234 CGGCCTGACACCTTCTCGT 61.932 63.158 0.00 0.00 0.00 4.18
450 451 1.371558 GGCCTGACACCTTCTCGTT 59.628 57.895 0.00 0.00 0.00 3.85
451 452 0.951040 GGCCTGACACCTTCTCGTTG 60.951 60.000 0.00 0.00 0.00 4.10
452 453 0.951040 GCCTGACACCTTCTCGTTGG 60.951 60.000 0.00 0.00 0.00 3.77
453 454 0.393077 CCTGACACCTTCTCGTTGGT 59.607 55.000 0.00 0.00 36.96 3.67
457 458 3.379650 CACCTTCTCGTTGGTGTGT 57.620 52.632 4.18 0.00 46.18 3.72
458 459 1.663695 CACCTTCTCGTTGGTGTGTT 58.336 50.000 4.18 0.00 46.18 3.32
459 460 1.330521 CACCTTCTCGTTGGTGTGTTG 59.669 52.381 4.18 0.00 46.18 3.33
460 461 0.944386 CCTTCTCGTTGGTGTGTTGG 59.056 55.000 0.00 0.00 0.00 3.77
461 462 0.944386 CTTCTCGTTGGTGTGTTGGG 59.056 55.000 0.00 0.00 0.00 4.12
462 463 1.098712 TTCTCGTTGGTGTGTTGGGC 61.099 55.000 0.00 0.00 0.00 5.36
463 464 1.821759 CTCGTTGGTGTGTTGGGCA 60.822 57.895 0.00 0.00 0.00 5.36
464 465 1.378646 TCGTTGGTGTGTTGGGCAA 60.379 52.632 0.00 0.00 0.00 4.52
465 466 1.065600 CGTTGGTGTGTTGGGCAAG 59.934 57.895 0.00 0.00 0.00 4.01
466 467 1.380403 CGTTGGTGTGTTGGGCAAGA 61.380 55.000 0.00 0.00 0.00 3.02
467 468 1.039856 GTTGGTGTGTTGGGCAAGAT 58.960 50.000 0.00 0.00 0.00 2.40
468 469 1.039068 TTGGTGTGTTGGGCAAGATG 58.961 50.000 0.00 0.00 0.00 2.90
469 470 0.184692 TGGTGTGTTGGGCAAGATGA 59.815 50.000 0.00 0.00 0.00 2.92
470 471 0.598065 GGTGTGTTGGGCAAGATGAC 59.402 55.000 0.00 0.00 0.00 3.06
471 472 1.317613 GTGTGTTGGGCAAGATGACA 58.682 50.000 0.00 0.00 0.00 3.58
472 473 1.001378 GTGTGTTGGGCAAGATGACAC 60.001 52.381 0.00 0.00 40.62 3.67
473 474 0.598065 GTGTTGGGCAAGATGACACC 59.402 55.000 0.00 0.00 35.71 4.16
474 475 0.888736 TGTTGGGCAAGATGACACCG 60.889 55.000 0.00 0.00 0.00 4.94
475 476 1.303236 TTGGGCAAGATGACACCGG 60.303 57.895 0.00 0.00 0.00 5.28
476 477 1.773856 TTGGGCAAGATGACACCGGA 61.774 55.000 9.46 0.00 0.00 5.14
477 478 1.224592 GGGCAAGATGACACCGGAT 59.775 57.895 9.46 0.00 0.00 4.18
478 479 0.468226 GGGCAAGATGACACCGGATA 59.532 55.000 9.46 0.00 0.00 2.59
479 480 1.072331 GGGCAAGATGACACCGGATAT 59.928 52.381 9.46 0.00 0.00 1.63
480 481 2.146342 GGCAAGATGACACCGGATATG 58.854 52.381 9.46 0.00 0.00 1.78
481 482 2.146342 GCAAGATGACACCGGATATGG 58.854 52.381 9.46 0.00 0.00 2.74
482 483 2.485479 GCAAGATGACACCGGATATGGT 60.485 50.000 9.46 0.00 45.21 3.55
490 491 2.638480 ACCGGATATGGTGGTTGATG 57.362 50.000 9.46 0.00 41.85 3.07
491 492 1.238439 CCGGATATGGTGGTTGATGC 58.762 55.000 0.00 0.00 0.00 3.91
492 493 1.476652 CCGGATATGGTGGTTGATGCA 60.477 52.381 0.00 0.00 0.00 3.96
493 494 2.507484 CGGATATGGTGGTTGATGCAT 58.493 47.619 0.00 0.00 0.00 3.96
494 495 3.558958 CCGGATATGGTGGTTGATGCATA 60.559 47.826 0.00 0.00 0.00 3.14
495 496 3.436704 CGGATATGGTGGTTGATGCATAC 59.563 47.826 0.00 0.00 0.00 2.39
496 497 4.397420 GGATATGGTGGTTGATGCATACA 58.603 43.478 0.00 0.00 0.00 2.29
497 498 4.456911 GGATATGGTGGTTGATGCATACAG 59.543 45.833 0.00 0.00 0.00 2.74
498 499 2.127271 TGGTGGTTGATGCATACAGG 57.873 50.000 0.00 0.00 0.00 4.00
499 500 1.632920 TGGTGGTTGATGCATACAGGA 59.367 47.619 0.00 0.00 0.00 3.86
500 501 2.292267 GGTGGTTGATGCATACAGGAG 58.708 52.381 0.00 0.00 0.00 3.69
501 502 2.092968 GGTGGTTGATGCATACAGGAGA 60.093 50.000 0.00 0.00 0.00 3.71
502 503 3.201290 GTGGTTGATGCATACAGGAGAG 58.799 50.000 0.00 0.00 0.00 3.20
503 504 2.216898 GGTTGATGCATACAGGAGAGC 58.783 52.381 0.00 0.00 0.00 4.09
504 505 2.420547 GGTTGATGCATACAGGAGAGCA 60.421 50.000 0.00 0.00 41.73 4.26
506 507 3.121738 TGATGCATACAGGAGAGCATG 57.878 47.619 0.00 0.00 46.71 4.06
507 508 2.701951 TGATGCATACAGGAGAGCATGA 59.298 45.455 0.00 0.00 46.71 3.07
508 509 2.609427 TGCATACAGGAGAGCATGAC 57.391 50.000 0.00 0.00 31.05 3.06
509 510 1.202452 TGCATACAGGAGAGCATGACG 60.202 52.381 0.00 0.00 31.05 4.35
510 511 1.871408 GCATACAGGAGAGCATGACGG 60.871 57.143 0.00 0.00 0.00 4.79
511 512 1.410517 CATACAGGAGAGCATGACGGT 59.589 52.381 0.00 0.00 0.00 4.83
512 513 2.430248 TACAGGAGAGCATGACGGTA 57.570 50.000 0.00 0.00 0.00 4.02
513 514 1.107114 ACAGGAGAGCATGACGGTAG 58.893 55.000 0.00 0.00 0.00 3.18
514 515 0.249238 CAGGAGAGCATGACGGTAGC 60.249 60.000 0.00 0.00 0.00 3.58
515 516 0.396417 AGGAGAGCATGACGGTAGCT 60.396 55.000 0.00 0.00 42.17 3.32
516 517 0.249238 GGAGAGCATGACGGTAGCTG 60.249 60.000 0.00 0.00 39.02 4.24
517 518 0.249238 GAGAGCATGACGGTAGCTGG 60.249 60.000 0.00 0.00 39.02 4.85
518 519 1.227380 GAGCATGACGGTAGCTGGG 60.227 63.158 0.00 0.00 39.02 4.45
519 520 2.203070 GCATGACGGTAGCTGGGG 60.203 66.667 0.00 0.00 0.00 4.96
520 521 2.731571 GCATGACGGTAGCTGGGGA 61.732 63.158 0.00 0.00 0.00 4.81
521 522 1.904771 CATGACGGTAGCTGGGGAA 59.095 57.895 0.00 0.00 0.00 3.97
522 523 0.251916 CATGACGGTAGCTGGGGAAA 59.748 55.000 0.00 0.00 0.00 3.13
523 524 0.252197 ATGACGGTAGCTGGGGAAAC 59.748 55.000 0.00 0.00 0.00 2.78
536 537 3.991242 GGAAACCCTATCTCGGCTC 57.009 57.895 0.00 0.00 0.00 4.70
537 538 0.393448 GGAAACCCTATCTCGGCTCC 59.607 60.000 0.00 0.00 0.00 4.70
538 539 0.032267 GAAACCCTATCTCGGCTCCG 59.968 60.000 1.14 1.14 41.35 4.63
539 540 0.686769 AAACCCTATCTCGGCTCCGT 60.687 55.000 8.28 0.00 40.74 4.69
540 541 1.392710 AACCCTATCTCGGCTCCGTG 61.393 60.000 8.28 6.13 40.74 4.94
541 542 1.828660 CCCTATCTCGGCTCCGTGT 60.829 63.158 8.28 0.49 40.74 4.49
542 543 1.655329 CCTATCTCGGCTCCGTGTC 59.345 63.158 8.28 0.00 40.74 3.67
543 544 0.820074 CCTATCTCGGCTCCGTGTCT 60.820 60.000 8.28 1.73 40.74 3.41
544 545 1.025812 CTATCTCGGCTCCGTGTCTT 58.974 55.000 8.28 0.00 40.74 3.01
545 546 0.738975 TATCTCGGCTCCGTGTCTTG 59.261 55.000 8.28 0.00 40.74 3.02
546 547 0.965866 ATCTCGGCTCCGTGTCTTGA 60.966 55.000 8.28 0.10 40.74 3.02
547 548 1.153939 CTCGGCTCCGTGTCTTGAG 60.154 63.158 8.28 0.00 40.74 3.02
548 549 1.867919 CTCGGCTCCGTGTCTTGAGT 61.868 60.000 8.28 0.00 40.74 3.41
549 550 0.607217 TCGGCTCCGTGTCTTGAGTA 60.607 55.000 8.28 0.00 40.74 2.59
550 551 0.179161 CGGCTCCGTGTCTTGAGTAG 60.179 60.000 0.00 0.00 34.35 2.57
551 552 0.889306 GGCTCCGTGTCTTGAGTAGT 59.111 55.000 0.00 0.00 0.00 2.73
552 553 1.402984 GGCTCCGTGTCTTGAGTAGTG 60.403 57.143 0.00 0.00 0.00 2.74
553 554 1.540267 GCTCCGTGTCTTGAGTAGTGA 59.460 52.381 0.00 0.00 0.00 3.41
554 555 2.164624 GCTCCGTGTCTTGAGTAGTGAT 59.835 50.000 0.00 0.00 0.00 3.06
555 556 3.763902 CTCCGTGTCTTGAGTAGTGATG 58.236 50.000 0.00 0.00 0.00 3.07
556 557 3.418047 TCCGTGTCTTGAGTAGTGATGA 58.582 45.455 0.00 0.00 0.00 2.92
557 558 4.017126 TCCGTGTCTTGAGTAGTGATGAT 58.983 43.478 0.00 0.00 0.00 2.45
558 559 4.108336 CCGTGTCTTGAGTAGTGATGATG 58.892 47.826 0.00 0.00 0.00 3.07
559 560 4.142381 CCGTGTCTTGAGTAGTGATGATGA 60.142 45.833 0.00 0.00 0.00 2.92
560 561 4.795795 CGTGTCTTGAGTAGTGATGATGAC 59.204 45.833 0.00 0.00 0.00 3.06
561 562 4.795795 GTGTCTTGAGTAGTGATGATGACG 59.204 45.833 0.00 0.00 0.00 4.35
562 563 3.794028 GTCTTGAGTAGTGATGATGACGC 59.206 47.826 0.00 0.00 0.00 5.19
563 564 2.871182 TGAGTAGTGATGATGACGCC 57.129 50.000 0.00 0.00 0.00 5.68
564 565 2.379005 TGAGTAGTGATGATGACGCCT 58.621 47.619 0.00 0.00 0.00 5.52
565 566 2.359214 TGAGTAGTGATGATGACGCCTC 59.641 50.000 0.00 0.00 0.00 4.70
566 567 2.621055 GAGTAGTGATGATGACGCCTCT 59.379 50.000 0.00 0.00 0.00 3.69
567 568 3.815962 GAGTAGTGATGATGACGCCTCTA 59.184 47.826 0.00 0.00 0.00 2.43
568 569 3.818210 AGTAGTGATGATGACGCCTCTAG 59.182 47.826 0.00 0.00 0.00 2.43
569 570 1.959985 AGTGATGATGACGCCTCTAGG 59.040 52.381 0.00 0.00 38.53 3.02
570 571 1.683917 GTGATGATGACGCCTCTAGGT 59.316 52.381 0.00 0.00 37.57 3.08
577 578 4.451150 CGCCTCTAGGTGCCGCAA 62.451 66.667 0.00 0.00 39.04 4.85
578 579 2.190578 GCCTCTAGGTGCCGCAAT 59.809 61.111 0.00 0.00 37.57 3.56
579 580 1.889573 GCCTCTAGGTGCCGCAATC 60.890 63.158 0.00 0.00 37.57 2.67
580 581 1.826024 CCTCTAGGTGCCGCAATCT 59.174 57.895 0.00 0.00 0.00 2.40
581 582 0.179000 CCTCTAGGTGCCGCAATCTT 59.821 55.000 0.00 0.00 0.00 2.40
582 583 1.293924 CTCTAGGTGCCGCAATCTTG 58.706 55.000 0.00 0.00 0.00 3.02
583 584 0.613260 TCTAGGTGCCGCAATCTTGT 59.387 50.000 0.00 0.00 0.00 3.16
584 585 0.729116 CTAGGTGCCGCAATCTTGTG 59.271 55.000 0.00 0.00 38.37 3.33
590 591 2.480555 CGCAATCTTGTGGACGGC 59.519 61.111 0.00 0.00 35.14 5.68
591 592 2.324330 CGCAATCTTGTGGACGGCA 61.324 57.895 0.00 0.00 35.14 5.69
592 593 1.210155 GCAATCTTGTGGACGGCAC 59.790 57.895 0.00 0.00 0.00 5.01
626 627 4.162690 GGCGGCTCAGATCCGGTT 62.163 66.667 14.47 0.00 46.51 4.44
627 628 2.892425 GCGGCTCAGATCCGGTTG 60.892 66.667 14.47 0.00 46.51 3.77
628 629 2.579201 CGGCTCAGATCCGGTTGT 59.421 61.111 4.66 0.00 42.99 3.32
629 630 1.811266 CGGCTCAGATCCGGTTGTG 60.811 63.158 4.66 1.45 42.99 3.33
630 631 2.109126 GGCTCAGATCCGGTTGTGC 61.109 63.158 16.41 16.41 34.13 4.57
631 632 2.456119 GCTCAGATCCGGTTGTGCG 61.456 63.158 0.00 0.00 0.00 5.34
632 633 2.434185 TCAGATCCGGTTGTGCGC 60.434 61.111 0.00 0.00 0.00 6.09
633 634 3.853330 CAGATCCGGTTGTGCGCG 61.853 66.667 0.00 0.00 0.00 6.86
634 635 4.373116 AGATCCGGTTGTGCGCGT 62.373 61.111 8.43 0.00 0.00 6.01
635 636 4.147322 GATCCGGTTGTGCGCGTG 62.147 66.667 8.43 0.00 0.00 5.34
645 646 3.860605 TGCGCGTGGGGCATAGAT 61.861 61.111 8.43 0.00 46.09 1.98
646 647 3.044305 GCGCGTGGGGCATAGATC 61.044 66.667 8.43 0.00 43.84 2.75
647 648 2.734723 CGCGTGGGGCATAGATCG 60.735 66.667 0.00 0.00 43.84 3.69
648 649 2.357517 GCGTGGGGCATAGATCGG 60.358 66.667 0.00 0.00 42.87 4.18
649 650 2.343758 CGTGGGGCATAGATCGGG 59.656 66.667 0.00 0.00 0.00 5.14
650 651 2.032681 GTGGGGCATAGATCGGGC 59.967 66.667 0.00 0.98 0.00 6.13
654 655 4.394712 GGCATAGATCGGGCCGGG 62.395 72.222 27.98 9.94 38.04 5.73
656 657 3.625897 CATAGATCGGGCCGGGCA 61.626 66.667 30.95 10.97 0.00 5.36
657 658 3.626924 ATAGATCGGGCCGGGCAC 61.627 66.667 30.95 17.82 0.00 5.01
681 682 3.358707 GGCTTGCGCGGTAACCAA 61.359 61.111 8.83 1.56 36.88 3.67
682 683 2.127003 GCTTGCGCGGTAACCAAC 60.127 61.111 8.83 0.00 0.00 3.77
683 684 2.613506 GCTTGCGCGGTAACCAACT 61.614 57.895 8.83 0.00 0.00 3.16
684 685 1.206578 CTTGCGCGGTAACCAACTG 59.793 57.895 8.83 0.00 37.55 3.16
685 686 2.182614 CTTGCGCGGTAACCAACTGG 62.183 60.000 8.83 0.00 42.17 4.00
687 688 3.428282 CGCGGTAACCAACTGGGC 61.428 66.667 0.00 0.00 40.17 5.36
688 689 3.428282 GCGGTAACCAACTGGGCG 61.428 66.667 0.00 0.00 42.05 6.13
689 690 2.031465 CGGTAACCAACTGGGCGT 59.969 61.111 0.00 0.00 42.05 5.68
690 691 2.322081 CGGTAACCAACTGGGCGTG 61.322 63.158 0.00 0.00 42.05 5.34
691 692 1.969589 GGTAACCAACTGGGCGTGG 60.970 63.158 0.00 0.00 42.05 4.94
692 693 2.281900 TAACCAACTGGGCGTGGC 60.282 61.111 0.00 0.00 42.05 5.01
693 694 3.121406 TAACCAACTGGGCGTGGCA 62.121 57.895 0.00 0.00 42.05 4.92
694 695 4.954970 ACCAACTGGGCGTGGCAG 62.955 66.667 0.00 0.00 42.05 4.85
695 696 4.954970 CCAACTGGGCGTGGCAGT 62.955 66.667 0.00 0.00 0.00 4.40
696 697 2.906897 CAACTGGGCGTGGCAGTT 60.907 61.111 0.00 0.00 39.45 3.16
697 698 2.123897 AACTGGGCGTGGCAGTTT 60.124 55.556 0.00 0.00 35.89 2.66
698 699 1.756561 AACTGGGCGTGGCAGTTTT 60.757 52.632 0.00 0.00 35.89 2.43
699 700 2.015227 AACTGGGCGTGGCAGTTTTG 62.015 55.000 0.00 0.00 35.89 2.44
700 701 3.211564 CTGGGCGTGGCAGTTTTGG 62.212 63.158 0.00 0.00 0.00 3.28
701 702 3.989787 GGGCGTGGCAGTTTTGGG 61.990 66.667 0.00 0.00 0.00 4.12
702 703 3.223589 GGCGTGGCAGTTTTGGGT 61.224 61.111 0.00 0.00 0.00 4.51
703 704 2.791868 GGCGTGGCAGTTTTGGGTT 61.792 57.895 0.00 0.00 0.00 4.11
704 705 1.142965 GCGTGGCAGTTTTGGGTTT 59.857 52.632 0.00 0.00 0.00 3.27
705 706 0.874175 GCGTGGCAGTTTTGGGTTTC 60.874 55.000 0.00 0.00 0.00 2.78
706 707 0.457851 CGTGGCAGTTTTGGGTTTCA 59.542 50.000 0.00 0.00 0.00 2.69
707 708 1.068434 CGTGGCAGTTTTGGGTTTCAT 59.932 47.619 0.00 0.00 0.00 2.57
708 709 2.482864 GTGGCAGTTTTGGGTTTCATG 58.517 47.619 0.00 0.00 0.00 3.07
709 710 2.114616 TGGCAGTTTTGGGTTTCATGT 58.885 42.857 0.00 0.00 0.00 3.21
710 711 2.102252 TGGCAGTTTTGGGTTTCATGTC 59.898 45.455 0.00 0.00 0.00 3.06
711 712 2.102252 GGCAGTTTTGGGTTTCATGTCA 59.898 45.455 0.00 0.00 0.00 3.58
712 713 3.383761 GCAGTTTTGGGTTTCATGTCAG 58.616 45.455 0.00 0.00 0.00 3.51
713 714 3.181476 GCAGTTTTGGGTTTCATGTCAGT 60.181 43.478 0.00 0.00 0.00 3.41
714 715 4.362279 CAGTTTTGGGTTTCATGTCAGTG 58.638 43.478 0.00 0.00 0.00 3.66
715 716 4.097741 CAGTTTTGGGTTTCATGTCAGTGA 59.902 41.667 0.00 0.00 0.00 3.41
716 717 4.097892 AGTTTTGGGTTTCATGTCAGTGAC 59.902 41.667 16.68 16.68 0.00 3.67
717 718 2.270352 TGGGTTTCATGTCAGTGACC 57.730 50.000 20.43 3.58 0.00 4.02
718 719 1.492599 TGGGTTTCATGTCAGTGACCA 59.507 47.619 20.43 9.10 0.00 4.02
719 720 2.154462 GGGTTTCATGTCAGTGACCAG 58.846 52.381 20.43 12.58 0.00 4.00
720 721 2.154462 GGTTTCATGTCAGTGACCAGG 58.846 52.381 20.43 10.33 0.00 4.45
721 722 2.487265 GGTTTCATGTCAGTGACCAGGT 60.487 50.000 20.43 0.00 0.00 4.00
722 723 3.214328 GTTTCATGTCAGTGACCAGGTT 58.786 45.455 20.43 0.00 0.00 3.50
723 724 2.549064 TCATGTCAGTGACCAGGTTG 57.451 50.000 20.43 10.09 0.00 3.77
724 725 1.072173 TCATGTCAGTGACCAGGTTGG 59.928 52.381 20.43 2.75 45.02 3.77
725 726 0.250901 ATGTCAGTGACCAGGTTGGC 60.251 55.000 20.43 0.00 42.67 4.52
726 727 1.600916 GTCAGTGACCAGGTTGGCC 60.601 63.158 12.54 0.00 42.67 5.36
727 728 2.669569 CAGTGACCAGGTTGGCCG 60.670 66.667 0.00 0.00 42.67 6.13
728 729 3.953775 AGTGACCAGGTTGGCCGG 61.954 66.667 0.00 0.00 42.67 6.13
729 730 4.265056 GTGACCAGGTTGGCCGGT 62.265 66.667 1.90 0.00 42.67 5.28
730 731 4.263572 TGACCAGGTTGGCCGGTG 62.264 66.667 1.90 0.00 42.67 4.94
731 732 3.948719 GACCAGGTTGGCCGGTGA 61.949 66.667 1.90 0.00 42.67 4.02
732 733 3.256960 ACCAGGTTGGCCGGTGAT 61.257 61.111 1.90 0.00 42.67 3.06
733 734 2.751436 CCAGGTTGGCCGGTGATG 60.751 66.667 1.90 0.00 40.50 3.07
734 735 3.443045 CAGGTTGGCCGGTGATGC 61.443 66.667 1.90 0.00 40.50 3.91
740 741 4.820744 GGCCGGTGATGCCCATGT 62.821 66.667 1.90 0.00 43.33 3.21
741 742 3.211963 GCCGGTGATGCCCATGTC 61.212 66.667 1.90 0.00 0.00 3.06
742 743 2.271821 CCGGTGATGCCCATGTCA 59.728 61.111 0.00 0.00 0.00 3.58
743 744 1.152902 CCGGTGATGCCCATGTCAT 60.153 57.895 0.00 0.00 0.00 3.06
744 745 0.108396 CCGGTGATGCCCATGTCATA 59.892 55.000 0.00 0.00 0.00 2.15
745 746 1.271543 CCGGTGATGCCCATGTCATAT 60.272 52.381 0.00 0.00 0.00 1.78
746 747 1.808343 CGGTGATGCCCATGTCATATG 59.192 52.381 0.00 0.00 0.00 1.78
747 748 2.165167 GGTGATGCCCATGTCATATGG 58.835 52.381 2.13 0.00 38.88 2.74
754 755 2.369983 CCATGTCATATGGGTTGGCT 57.630 50.000 2.13 0.00 35.58 4.75
755 756 2.669781 CCATGTCATATGGGTTGGCTT 58.330 47.619 2.13 0.00 35.58 4.35
756 757 2.363038 CCATGTCATATGGGTTGGCTTG 59.637 50.000 2.13 0.00 35.58 4.01
757 758 2.897271 TGTCATATGGGTTGGCTTGT 57.103 45.000 2.13 0.00 0.00 3.16
758 759 2.722094 TGTCATATGGGTTGGCTTGTC 58.278 47.619 2.13 0.00 0.00 3.18
759 760 2.308570 TGTCATATGGGTTGGCTTGTCT 59.691 45.455 2.13 0.00 0.00 3.41
760 761 3.245229 TGTCATATGGGTTGGCTTGTCTT 60.245 43.478 2.13 0.00 0.00 3.01
761 762 3.763897 GTCATATGGGTTGGCTTGTCTTT 59.236 43.478 2.13 0.00 0.00 2.52
762 763 3.763360 TCATATGGGTTGGCTTGTCTTTG 59.237 43.478 2.13 0.00 0.00 2.77
763 764 2.086610 ATGGGTTGGCTTGTCTTTGT 57.913 45.000 0.00 0.00 0.00 2.83
764 765 1.859302 TGGGTTGGCTTGTCTTTGTT 58.141 45.000 0.00 0.00 0.00 2.83
765 766 2.183679 TGGGTTGGCTTGTCTTTGTTT 58.816 42.857 0.00 0.00 0.00 2.83
766 767 2.569404 TGGGTTGGCTTGTCTTTGTTTT 59.431 40.909 0.00 0.00 0.00 2.43
767 768 3.769844 TGGGTTGGCTTGTCTTTGTTTTA 59.230 39.130 0.00 0.00 0.00 1.52
768 769 4.142049 TGGGTTGGCTTGTCTTTGTTTTAG 60.142 41.667 0.00 0.00 0.00 1.85
769 770 3.802139 GGTTGGCTTGTCTTTGTTTTAGC 59.198 43.478 0.00 0.00 0.00 3.09
770 771 3.726291 TGGCTTGTCTTTGTTTTAGCC 57.274 42.857 0.00 0.00 46.43 3.93
771 772 3.295973 TGGCTTGTCTTTGTTTTAGCCT 58.704 40.909 11.70 0.00 46.40 4.58
772 773 3.068024 TGGCTTGTCTTTGTTTTAGCCTG 59.932 43.478 11.70 0.00 46.40 4.85
773 774 3.552890 GGCTTGTCTTTGTTTTAGCCTGG 60.553 47.826 0.00 0.00 43.67 4.45
774 775 3.068165 GCTTGTCTTTGTTTTAGCCTGGT 59.932 43.478 0.00 0.00 0.00 4.00
775 776 4.441495 GCTTGTCTTTGTTTTAGCCTGGTT 60.441 41.667 0.00 0.00 0.00 3.67
776 777 5.660460 CTTGTCTTTGTTTTAGCCTGGTTT 58.340 37.500 0.00 0.00 0.00 3.27
777 778 5.669164 TGTCTTTGTTTTAGCCTGGTTTT 57.331 34.783 0.00 0.00 0.00 2.43
778 779 6.043854 TGTCTTTGTTTTAGCCTGGTTTTT 57.956 33.333 0.00 0.00 0.00 1.94
779 780 6.103330 TGTCTTTGTTTTAGCCTGGTTTTTC 58.897 36.000 0.00 0.00 0.00 2.29
780 781 5.231357 GTCTTTGTTTTAGCCTGGTTTTTCG 59.769 40.000 0.00 0.00 0.00 3.46
781 782 4.722361 TTGTTTTAGCCTGGTTTTTCGT 57.278 36.364 0.00 0.00 0.00 3.85
782 783 4.295857 TGTTTTAGCCTGGTTTTTCGTC 57.704 40.909 0.00 0.00 0.00 4.20
783 784 3.695060 TGTTTTAGCCTGGTTTTTCGTCA 59.305 39.130 0.00 0.00 0.00 4.35
784 785 4.158025 TGTTTTAGCCTGGTTTTTCGTCAA 59.842 37.500 0.00 0.00 0.00 3.18
785 786 5.163499 TGTTTTAGCCTGGTTTTTCGTCAAT 60.163 36.000 0.00 0.00 0.00 2.57
786 787 5.523438 TTTAGCCTGGTTTTTCGTCAATT 57.477 34.783 0.00 0.00 0.00 2.32
787 788 6.636562 TTTAGCCTGGTTTTTCGTCAATTA 57.363 33.333 0.00 0.00 0.00 1.40
788 789 6.636562 TTAGCCTGGTTTTTCGTCAATTAA 57.363 33.333 0.00 0.00 0.00 1.40
789 790 5.722021 AGCCTGGTTTTTCGTCAATTAAT 57.278 34.783 0.00 0.00 0.00 1.40
790 791 5.709966 AGCCTGGTTTTTCGTCAATTAATC 58.290 37.500 0.00 0.00 0.00 1.75
791 792 4.557301 GCCTGGTTTTTCGTCAATTAATCG 59.443 41.667 0.00 0.00 0.00 3.34
792 793 5.092781 CCTGGTTTTTCGTCAATTAATCGG 58.907 41.667 0.00 0.00 0.00 4.18
793 794 5.106475 CCTGGTTTTTCGTCAATTAATCGGA 60.106 40.000 0.00 0.00 0.00 4.55
794 795 5.691815 TGGTTTTTCGTCAATTAATCGGAC 58.308 37.500 9.18 9.18 0.00 4.79
795 796 5.238868 TGGTTTTTCGTCAATTAATCGGACA 59.761 36.000 16.13 5.31 0.00 4.02
796 797 6.144175 GGTTTTTCGTCAATTAATCGGACAA 58.856 36.000 16.13 9.33 0.00 3.18
797 798 6.804783 GGTTTTTCGTCAATTAATCGGACAAT 59.195 34.615 16.13 0.00 0.00 2.71
798 799 7.327518 GGTTTTTCGTCAATTAATCGGACAATT 59.672 33.333 16.13 0.00 0.00 2.32
799 800 8.696175 GTTTTTCGTCAATTAATCGGACAATTT 58.304 29.630 16.13 0.00 0.00 1.82
800 801 8.804688 TTTTCGTCAATTAATCGGACAATTTT 57.195 26.923 16.13 0.00 0.00 1.82
801 802 8.804688 TTTCGTCAATTAATCGGACAATTTTT 57.195 26.923 16.13 0.00 0.00 1.94
828 829 9.558396 TTTTCTTAATCAATGAAAATGGCAAGT 57.442 25.926 0.00 0.00 35.57 3.16
829 830 8.761575 TTCTTAATCAATGAAAATGGCAAGTC 57.238 30.769 0.00 0.00 0.00 3.01
830 831 8.125978 TCTTAATCAATGAAAATGGCAAGTCT 57.874 30.769 0.00 0.00 0.00 3.24
831 832 8.587608 TCTTAATCAATGAAAATGGCAAGTCTT 58.412 29.630 0.00 0.00 0.00 3.01
832 833 9.211485 CTTAATCAATGAAAATGGCAAGTCTTT 57.789 29.630 0.00 0.00 0.00 2.52
833 834 9.558396 TTAATCAATGAAAATGGCAAGTCTTTT 57.442 25.926 0.00 0.00 0.00 2.27
835 836 7.945033 TCAATGAAAATGGCAAGTCTTTTAC 57.055 32.000 0.00 0.00 0.00 2.01
836 837 7.725251 TCAATGAAAATGGCAAGTCTTTTACT 58.275 30.769 0.00 0.00 41.49 2.24
838 839 8.490355 CAATGAAAATGGCAAGTCTTTTACTTC 58.510 33.333 0.00 0.00 45.64 3.01
839 840 7.106439 TGAAAATGGCAAGTCTTTTACTTCA 57.894 32.000 0.00 0.00 45.64 3.02
840 841 7.725251 TGAAAATGGCAAGTCTTTTACTTCAT 58.275 30.769 0.00 0.00 45.64 2.57
841 842 8.203485 TGAAAATGGCAAGTCTTTTACTTCATT 58.797 29.630 0.00 0.00 45.64 2.57
842 843 8.962884 AAAATGGCAAGTCTTTTACTTCATTT 57.037 26.923 0.00 9.80 45.64 2.32
843 844 8.962884 AAATGGCAAGTCTTTTACTTCATTTT 57.037 26.923 0.00 0.00 45.64 1.82
847 848 9.877178 TGGCAAGTCTTTTACTTCATTTTAAAA 57.123 25.926 2.51 2.51 45.64 1.52
887 888 9.498307 GAAACAAAATTTATACCGTCTACATGG 57.502 33.333 0.00 0.00 34.34 3.66
888 889 7.562454 ACAAAATTTATACCGTCTACATGGG 57.438 36.000 0.00 0.00 32.01 4.00
889 890 7.114095 ACAAAATTTATACCGTCTACATGGGT 58.886 34.615 0.00 0.00 37.84 4.51
890 891 7.066525 ACAAAATTTATACCGTCTACATGGGTG 59.933 37.037 0.00 0.00 35.28 4.61
891 892 5.881923 ATTTATACCGTCTACATGGGTGT 57.118 39.130 0.00 0.00 42.39 4.16
892 893 4.659111 TTATACCGTCTACATGGGTGTG 57.341 45.455 0.00 0.00 39.39 3.82
893 894 2.219080 TACCGTCTACATGGGTGTGA 57.781 50.000 0.00 0.00 39.39 3.58
894 895 0.895530 ACCGTCTACATGGGTGTGAG 59.104 55.000 0.00 0.00 39.39 3.51
895 896 0.460284 CCGTCTACATGGGTGTGAGC 60.460 60.000 0.00 0.00 39.39 4.26
896 897 0.802222 CGTCTACATGGGTGTGAGCG 60.802 60.000 0.00 0.00 39.39 5.03
897 898 1.084370 GTCTACATGGGTGTGAGCGC 61.084 60.000 0.00 0.00 39.39 5.92
898 899 1.815421 CTACATGGGTGTGAGCGCC 60.815 63.158 2.29 0.00 44.31 6.53
899 900 3.657448 TACATGGGTGTGAGCGCCG 62.657 63.158 2.29 0.00 45.93 6.46
904 905 3.276846 GGTGTGAGCGCCGTGTTT 61.277 61.111 2.29 0.00 35.34 2.83
905 906 2.248431 GTGTGAGCGCCGTGTTTC 59.752 61.111 2.29 0.00 0.00 2.78
906 907 2.108157 TGTGAGCGCCGTGTTTCT 59.892 55.556 2.29 0.00 0.00 2.52
907 908 2.243957 TGTGAGCGCCGTGTTTCTG 61.244 57.895 2.29 0.00 0.00 3.02
908 909 3.345808 TGAGCGCCGTGTTTCTGC 61.346 61.111 2.29 0.00 0.00 4.26
909 910 3.044305 GAGCGCCGTGTTTCTGCT 61.044 61.111 2.29 0.00 38.89 4.24
910 911 1.736645 GAGCGCCGTGTTTCTGCTA 60.737 57.895 2.29 0.00 35.73 3.49
911 912 1.956620 GAGCGCCGTGTTTCTGCTAC 61.957 60.000 2.29 0.00 35.73 3.58
912 913 2.314647 GCGCCGTGTTTCTGCTACA 61.315 57.895 0.00 0.00 0.00 2.74
913 914 1.635663 GCGCCGTGTTTCTGCTACAT 61.636 55.000 0.00 0.00 0.00 2.29
914 915 1.635844 CGCCGTGTTTCTGCTACATA 58.364 50.000 0.00 0.00 0.00 2.29
915 916 2.201732 CGCCGTGTTTCTGCTACATAT 58.798 47.619 0.00 0.00 0.00 1.78
916 917 2.607635 CGCCGTGTTTCTGCTACATATT 59.392 45.455 0.00 0.00 0.00 1.28
917 918 3.302480 CGCCGTGTTTCTGCTACATATTC 60.302 47.826 0.00 0.00 0.00 1.75
918 919 3.002348 GCCGTGTTTCTGCTACATATTCC 59.998 47.826 0.00 0.00 0.00 3.01
919 920 4.188462 CCGTGTTTCTGCTACATATTCCA 58.812 43.478 0.00 0.00 0.00 3.53
920 921 4.034048 CCGTGTTTCTGCTACATATTCCAC 59.966 45.833 0.00 0.00 0.00 4.02
921 922 4.034048 CGTGTTTCTGCTACATATTCCACC 59.966 45.833 0.00 0.00 0.00 4.61
922 923 4.941263 GTGTTTCTGCTACATATTCCACCA 59.059 41.667 0.00 0.00 0.00 4.17
923 924 5.414454 GTGTTTCTGCTACATATTCCACCAA 59.586 40.000 0.00 0.00 0.00 3.67
924 925 5.647658 TGTTTCTGCTACATATTCCACCAAG 59.352 40.000 0.00 0.00 0.00 3.61
925 926 4.422073 TCTGCTACATATTCCACCAAGG 57.578 45.455 0.00 0.00 39.47 3.61
926 927 3.136443 TCTGCTACATATTCCACCAAGGG 59.864 47.826 0.00 0.00 38.24 3.95
927 928 2.849943 TGCTACATATTCCACCAAGGGT 59.150 45.455 0.00 0.00 38.24 4.34
967 968 3.443329 TGACACATTCCATGCATTGGTAC 59.557 43.478 0.00 0.00 46.52 3.34
1172 1173 3.272574 ACATGACAAATCGATGCCTCT 57.727 42.857 0.00 0.00 0.00 3.69
1197 1198 8.608844 TTGTAGAGATTTCAAAGACCTTTCTC 57.391 34.615 0.00 0.00 0.00 2.87
1209 1210 5.986501 AGACCTTTCTCTGTAGTTACCTG 57.013 43.478 0.00 0.00 0.00 4.00
1212 1213 4.527427 ACCTTTCTCTGTAGTTACCTGTCC 59.473 45.833 0.00 0.00 0.00 4.02
1288 1289 0.250597 GGTTGTGGACACCCCTGTAC 60.251 60.000 0.00 0.00 35.38 2.90
1297 1298 3.606687 GACACCCCTGTACCAACTAATG 58.393 50.000 0.00 0.00 0.00 1.90
1303 1304 3.371487 CCCTGTACCAACTAATGCCATCA 60.371 47.826 0.00 0.00 0.00 3.07
1313 1314 7.560991 ACCAACTAATGCCATCATTATGAAGAA 59.439 33.333 0.00 0.00 42.43 2.52
1314 1315 8.080417 CCAACTAATGCCATCATTATGAAGAAG 58.920 37.037 0.00 0.00 42.43 2.85
1315 1316 8.843262 CAACTAATGCCATCATTATGAAGAAGA 58.157 33.333 0.00 0.00 42.43 2.87
1463 4971 7.594714 TCGGCTTACAGATATCTATTCAACTC 58.405 38.462 4.54 0.00 0.00 3.01
1517 5025 3.701040 GCTTTGGAGGGCATTTCATTCTA 59.299 43.478 0.00 0.00 0.00 2.10
1572 5080 4.799564 ATCTGACTCTTCTGTCTTGGTC 57.200 45.455 0.00 0.00 37.79 4.02
1641 5153 5.485353 TCTCTGGAAATTAAGAAGCTCCTGA 59.515 40.000 0.00 0.00 34.26 3.86
1645 5157 7.671398 TCTGGAAATTAAGAAGCTCCTGAAATT 59.329 33.333 0.00 0.00 32.96 1.82
1674 5186 6.605594 TGGGTTTATTCCGCAGAAATTAGATT 59.394 34.615 0.00 0.00 35.09 2.40
1795 5307 8.848474 AGTTTTGTATTAGCAGACTGTAACAT 57.152 30.769 3.99 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.839310 ATTGGTGCTTTCTTATATAGTAGCTG 57.161 34.615 0.00 0.00 35.27 4.24
2 3 8.874816 GCTATTGGTGCTTTCTTATATAGTAGC 58.125 37.037 0.00 0.00 35.00 3.58
10 11 9.627123 TTGTTATAGCTATTGGTGCTTTCTTAT 57.373 29.630 12.39 0.00 41.46 1.73
11 12 9.109393 CTTGTTATAGCTATTGGTGCTTTCTTA 57.891 33.333 12.39 0.00 41.46 2.10
12 13 7.829211 TCTTGTTATAGCTATTGGTGCTTTCTT 59.171 33.333 12.39 0.00 41.46 2.52
13 14 7.338710 TCTTGTTATAGCTATTGGTGCTTTCT 58.661 34.615 12.39 0.00 41.46 2.52
14 15 7.553881 TCTTGTTATAGCTATTGGTGCTTTC 57.446 36.000 12.39 0.00 41.46 2.62
15 16 7.148069 GGTTCTTGTTATAGCTATTGGTGCTTT 60.148 37.037 12.39 0.00 41.46 3.51
16 17 6.318900 GGTTCTTGTTATAGCTATTGGTGCTT 59.681 38.462 12.39 0.00 41.46 3.91
17 18 5.823045 GGTTCTTGTTATAGCTATTGGTGCT 59.177 40.000 12.39 0.00 43.79 4.40
18 19 5.588648 TGGTTCTTGTTATAGCTATTGGTGC 59.411 40.000 12.39 0.00 0.00 5.01
19 20 7.624360 TTGGTTCTTGTTATAGCTATTGGTG 57.376 36.000 12.39 0.00 0.00 4.17
20 21 8.644374 TTTTGGTTCTTGTTATAGCTATTGGT 57.356 30.769 12.39 0.00 0.00 3.67
25 26 9.403583 CCCTATTTTTGGTTCTTGTTATAGCTA 57.596 33.333 0.00 0.00 0.00 3.32
26 27 8.113462 TCCCTATTTTTGGTTCTTGTTATAGCT 58.887 33.333 0.00 0.00 0.00 3.32
27 28 8.288689 TCCCTATTTTTGGTTCTTGTTATAGC 57.711 34.615 0.00 0.00 0.00 2.97
30 31 9.320295 TCAATCCCTATTTTTGGTTCTTGTTAT 57.680 29.630 0.00 0.00 0.00 1.89
31 32 8.713708 TCAATCCCTATTTTTGGTTCTTGTTA 57.286 30.769 0.00 0.00 0.00 2.41
32 33 7.610580 TCAATCCCTATTTTTGGTTCTTGTT 57.389 32.000 0.00 0.00 0.00 2.83
33 34 6.295292 GCTCAATCCCTATTTTTGGTTCTTGT 60.295 38.462 0.00 0.00 0.00 3.16
34 35 6.101997 GCTCAATCCCTATTTTTGGTTCTTG 58.898 40.000 0.00 0.00 0.00 3.02
35 36 5.187772 GGCTCAATCCCTATTTTTGGTTCTT 59.812 40.000 0.00 0.00 0.00 2.52
36 37 4.711846 GGCTCAATCCCTATTTTTGGTTCT 59.288 41.667 0.00 0.00 0.00 3.01
37 38 4.466015 TGGCTCAATCCCTATTTTTGGTTC 59.534 41.667 0.00 0.00 0.00 3.62
38 39 4.424842 TGGCTCAATCCCTATTTTTGGTT 58.575 39.130 0.00 0.00 0.00 3.67
39 40 4.059773 TGGCTCAATCCCTATTTTTGGT 57.940 40.909 0.00 0.00 0.00 3.67
40 41 5.178061 GTTTGGCTCAATCCCTATTTTTGG 58.822 41.667 0.00 0.00 0.00 3.28
41 42 5.792741 TGTTTGGCTCAATCCCTATTTTTG 58.207 37.500 0.00 0.00 0.00 2.44
42 43 6.432403 TTGTTTGGCTCAATCCCTATTTTT 57.568 33.333 0.00 0.00 0.00 1.94
43 44 6.432403 TTTGTTTGGCTCAATCCCTATTTT 57.568 33.333 0.00 0.00 0.00 1.82
44 45 5.569428 GCTTTGTTTGGCTCAATCCCTATTT 60.569 40.000 0.00 0.00 0.00 1.40
45 46 4.081476 GCTTTGTTTGGCTCAATCCCTATT 60.081 41.667 0.00 0.00 0.00 1.73
46 47 3.448660 GCTTTGTTTGGCTCAATCCCTAT 59.551 43.478 0.00 0.00 0.00 2.57
47 48 2.825532 GCTTTGTTTGGCTCAATCCCTA 59.174 45.455 0.00 0.00 0.00 3.53
48 49 1.620323 GCTTTGTTTGGCTCAATCCCT 59.380 47.619 0.00 0.00 0.00 4.20
49 50 1.669795 CGCTTTGTTTGGCTCAATCCC 60.670 52.381 0.00 0.00 0.00 3.85
50 51 1.269448 TCGCTTTGTTTGGCTCAATCC 59.731 47.619 0.00 0.00 0.00 3.01
51 52 2.589014 CTCGCTTTGTTTGGCTCAATC 58.411 47.619 0.00 0.00 0.00 2.67
52 53 1.270550 CCTCGCTTTGTTTGGCTCAAT 59.729 47.619 0.00 0.00 0.00 2.57
53 54 0.667993 CCTCGCTTTGTTTGGCTCAA 59.332 50.000 0.00 0.00 0.00 3.02
54 55 1.795170 GCCTCGCTTTGTTTGGCTCA 61.795 55.000 0.00 0.00 40.36 4.26
55 56 1.081175 GCCTCGCTTTGTTTGGCTC 60.081 57.895 0.00 0.00 40.36 4.70
56 57 2.908073 CGCCTCGCTTTGTTTGGCT 61.908 57.895 0.00 0.00 41.25 4.75
57 58 2.429069 CGCCTCGCTTTGTTTGGC 60.429 61.111 0.00 0.00 40.14 4.52
58 59 1.082104 GACGCCTCGCTTTGTTTGG 60.082 57.895 0.00 0.00 0.00 3.28
59 60 0.110644 GAGACGCCTCGCTTTGTTTG 60.111 55.000 0.00 0.00 0.00 2.93
60 61 1.228657 GGAGACGCCTCGCTTTGTTT 61.229 55.000 0.00 0.00 40.33 2.83
61 62 1.668151 GGAGACGCCTCGCTTTGTT 60.668 57.895 0.00 0.00 40.33 2.83
62 63 2.048127 GGAGACGCCTCGCTTTGT 60.048 61.111 0.00 0.00 40.33 2.83
74 75 0.747852 GGAGGATGAGGAACGGAGAC 59.252 60.000 0.00 0.00 0.00 3.36
75 76 0.397254 GGGAGGATGAGGAACGGAGA 60.397 60.000 0.00 0.00 0.00 3.71
76 77 0.397816 AGGGAGGATGAGGAACGGAG 60.398 60.000 0.00 0.00 0.00 4.63
77 78 0.397254 GAGGGAGGATGAGGAACGGA 60.397 60.000 0.00 0.00 0.00 4.69
78 79 1.403687 GGAGGGAGGATGAGGAACGG 61.404 65.000 0.00 0.00 0.00 4.44
79 80 1.403687 GGGAGGGAGGATGAGGAACG 61.404 65.000 0.00 0.00 0.00 3.95
80 81 1.057275 GGGGAGGGAGGATGAGGAAC 61.057 65.000 0.00 0.00 0.00 3.62
81 82 1.318380 GGGGAGGGAGGATGAGGAA 59.682 63.158 0.00 0.00 0.00 3.36
82 83 1.946707 TGGGGAGGGAGGATGAGGA 60.947 63.158 0.00 0.00 0.00 3.71
83 84 1.768077 GTGGGGAGGGAGGATGAGG 60.768 68.421 0.00 0.00 0.00 3.86
84 85 2.136878 CGTGGGGAGGGAGGATGAG 61.137 68.421 0.00 0.00 0.00 2.90
85 86 2.041922 CGTGGGGAGGGAGGATGA 60.042 66.667 0.00 0.00 0.00 2.92
86 87 3.866582 GCGTGGGGAGGGAGGATG 61.867 72.222 0.00 0.00 0.00 3.51
109 110 3.744719 TCTGGCGACGTCTTCCGG 61.745 66.667 20.32 20.32 42.24 5.14
110 111 2.504244 GTCTGGCGACGTCTTCCG 60.504 66.667 14.70 10.59 44.03 4.30
120 121 2.507992 CTCAGGCTTCGTCTGGCG 60.508 66.667 0.00 0.00 35.77 5.69
121 122 1.739562 CACTCAGGCTTCGTCTGGC 60.740 63.158 0.00 0.00 35.77 4.85
122 123 1.079543 CCACTCAGGCTTCGTCTGG 60.080 63.158 0.00 0.00 35.77 3.86
123 124 4.586618 CCACTCAGGCTTCGTCTG 57.413 61.111 0.00 0.00 36.50 3.51
132 133 4.742201 CACCGTCGGCCACTCAGG 62.742 72.222 12.28 0.26 41.84 3.86
133 134 4.742201 CCACCGTCGGCCACTCAG 62.742 72.222 12.28 0.00 0.00 3.35
145 146 4.619227 AAGACCACGCCACCACCG 62.619 66.667 0.00 0.00 0.00 4.94
146 147 2.203294 AAAGACCACGCCACCACC 60.203 61.111 0.00 0.00 0.00 4.61
147 148 2.258726 GGAAAGACCACGCCACCAC 61.259 63.158 0.00 0.00 38.79 4.16
148 149 2.112297 GGAAAGACCACGCCACCA 59.888 61.111 0.00 0.00 38.79 4.17
149 150 1.671379 GAGGAAAGACCACGCCACC 60.671 63.158 0.00 0.00 42.04 4.61
150 151 2.027625 CGAGGAAAGACCACGCCAC 61.028 63.158 0.00 0.00 44.49 5.01
151 152 2.342279 CGAGGAAAGACCACGCCA 59.658 61.111 0.00 0.00 44.49 5.69
165 166 3.185188 CACATATCCTTGAAATCCGCGAG 59.815 47.826 8.23 0.00 0.00 5.03
166 167 3.130633 CACATATCCTTGAAATCCGCGA 58.869 45.455 8.23 0.00 0.00 5.87
167 168 2.224079 CCACATATCCTTGAAATCCGCG 59.776 50.000 0.00 0.00 0.00 6.46
168 169 2.554032 CCCACATATCCTTGAAATCCGC 59.446 50.000 0.00 0.00 0.00 5.54
169 170 2.554032 GCCCACATATCCTTGAAATCCG 59.446 50.000 0.00 0.00 0.00 4.18
170 171 2.554032 CGCCCACATATCCTTGAAATCC 59.446 50.000 0.00 0.00 0.00 3.01
171 172 2.554032 CCGCCCACATATCCTTGAAATC 59.446 50.000 0.00 0.00 0.00 2.17
172 173 2.091885 ACCGCCCACATATCCTTGAAAT 60.092 45.455 0.00 0.00 0.00 2.17
173 174 1.283613 ACCGCCCACATATCCTTGAAA 59.716 47.619 0.00 0.00 0.00 2.69
174 175 0.916086 ACCGCCCACATATCCTTGAA 59.084 50.000 0.00 0.00 0.00 2.69
175 176 1.691976 CTACCGCCCACATATCCTTGA 59.308 52.381 0.00 0.00 0.00 3.02
176 177 1.878102 GCTACCGCCCACATATCCTTG 60.878 57.143 0.00 0.00 0.00 3.61
177 178 0.396811 GCTACCGCCCACATATCCTT 59.603 55.000 0.00 0.00 0.00 3.36
178 179 0.471971 AGCTACCGCCCACATATCCT 60.472 55.000 0.00 0.00 36.60 3.24
179 180 0.037232 GAGCTACCGCCCACATATCC 60.037 60.000 0.00 0.00 36.60 2.59
180 181 0.037232 GGAGCTACCGCCCACATATC 60.037 60.000 0.00 0.00 36.60 1.63
181 182 2.058675 GGAGCTACCGCCCACATAT 58.941 57.895 0.00 0.00 36.60 1.78
182 183 3.546009 GGAGCTACCGCCCACATA 58.454 61.111 0.00 0.00 36.60 2.29
189 190 4.577246 CTCGCTGGGAGCTACCGC 62.577 72.222 18.50 18.50 39.60 5.68
190 191 2.136196 GATCTCGCTGGGAGCTACCG 62.136 65.000 11.35 6.47 42.82 4.02
191 192 1.663173 GATCTCGCTGGGAGCTACC 59.337 63.158 8.55 8.55 42.82 3.18
192 193 1.109920 TGGATCTCGCTGGGAGCTAC 61.110 60.000 16.14 8.71 42.82 3.58
193 194 0.825425 CTGGATCTCGCTGGGAGCTA 60.825 60.000 16.14 1.40 42.82 3.32
194 195 2.042537 TGGATCTCGCTGGGAGCT 60.043 61.111 16.14 7.32 42.82 4.09
195 196 2.420890 CTGGATCTCGCTGGGAGC 59.579 66.667 16.14 4.10 42.82 4.70
196 197 2.420890 GCTGGATCTCGCTGGGAG 59.579 66.667 14.95 14.95 44.58 4.30
197 198 3.531207 CGCTGGATCTCGCTGGGA 61.531 66.667 0.00 0.00 0.00 4.37
198 199 4.598894 CCGCTGGATCTCGCTGGG 62.599 72.222 0.00 0.00 0.00 4.45
204 205 4.959596 GGAGCGCCGCTGGATCTC 62.960 72.222 20.07 0.00 39.88 2.75
217 218 3.896133 CACATGCATGCCCGGAGC 61.896 66.667 26.53 5.29 44.14 4.70
218 219 3.896133 GCACATGCATGCCCGGAG 61.896 66.667 26.53 10.46 39.86 4.63
233 234 4.657408 TTGCTGGACGCCATGGCA 62.657 61.111 34.93 15.79 42.06 4.92
234 235 4.120331 GTTGCTGGACGCCATGGC 62.120 66.667 27.67 27.67 38.05 4.40
235 236 3.803082 CGTTGCTGGACGCCATGG 61.803 66.667 7.63 7.63 38.05 3.66
255 256 4.341502 TTTGCCGAGCTTTGCCGC 62.342 61.111 6.02 0.00 0.00 6.53
256 257 2.126734 CTTTGCCGAGCTTTGCCG 60.127 61.111 6.02 0.00 0.00 5.69
257 258 2.259511 CCTTTGCCGAGCTTTGCC 59.740 61.111 6.02 0.00 0.00 4.52
258 259 2.259511 CCCTTTGCCGAGCTTTGC 59.740 61.111 1.72 1.72 0.00 3.68
259 260 1.286880 CACCCTTTGCCGAGCTTTG 59.713 57.895 0.00 0.00 0.00 2.77
260 261 1.903404 CCACCCTTTGCCGAGCTTT 60.903 57.895 0.00 0.00 0.00 3.51
261 262 2.282462 CCACCCTTTGCCGAGCTT 60.282 61.111 0.00 0.00 0.00 3.74
262 263 3.570212 ACCACCCTTTGCCGAGCT 61.570 61.111 0.00 0.00 0.00 4.09
263 264 3.365265 CACCACCCTTTGCCGAGC 61.365 66.667 0.00 0.00 0.00 5.03
264 265 2.672996 CCACCACCCTTTGCCGAG 60.673 66.667 0.00 0.00 0.00 4.63
265 266 4.278513 CCCACCACCCTTTGCCGA 62.279 66.667 0.00 0.00 0.00 5.54
286 287 2.749044 AATGACCAGCAGCAGCCG 60.749 61.111 0.00 0.00 43.56 5.52
287 288 2.707849 CCAATGACCAGCAGCAGCC 61.708 63.158 0.00 0.00 43.56 4.85
288 289 1.975407 ACCAATGACCAGCAGCAGC 60.975 57.895 0.00 0.00 42.56 5.25
289 290 1.880894 CACCAATGACCAGCAGCAG 59.119 57.895 0.00 0.00 0.00 4.24
290 291 2.270257 GCACCAATGACCAGCAGCA 61.270 57.895 0.00 0.00 0.00 4.41
291 292 1.601419 ATGCACCAATGACCAGCAGC 61.601 55.000 0.00 0.00 38.75 5.25
292 293 0.454600 GATGCACCAATGACCAGCAG 59.545 55.000 0.00 0.00 38.75 4.24
293 294 1.307355 CGATGCACCAATGACCAGCA 61.307 55.000 0.00 0.00 39.79 4.41
294 295 1.026182 TCGATGCACCAATGACCAGC 61.026 55.000 0.00 0.00 0.00 4.85
295 296 1.012086 CTCGATGCACCAATGACCAG 58.988 55.000 0.00 0.00 0.00 4.00
296 297 1.026182 GCTCGATGCACCAATGACCA 61.026 55.000 0.00 0.00 42.31 4.02
297 298 1.723870 GCTCGATGCACCAATGACC 59.276 57.895 0.00 0.00 42.31 4.02
298 299 1.349627 CGCTCGATGCACCAATGAC 59.650 57.895 0.00 0.00 43.06 3.06
299 300 1.079197 ACGCTCGATGCACCAATGA 60.079 52.632 0.00 0.00 43.06 2.57
300 301 1.061411 CACGCTCGATGCACCAATG 59.939 57.895 0.00 0.00 43.06 2.82
301 302 2.108514 CCACGCTCGATGCACCAAT 61.109 57.895 0.00 0.00 43.06 3.16
302 303 2.741985 CCACGCTCGATGCACCAA 60.742 61.111 0.00 0.00 43.06 3.67
305 306 3.857854 CAGCCACGCTCGATGCAC 61.858 66.667 0.00 0.00 43.06 4.57
322 323 4.875713 ATCAACGCCCATCCCGCC 62.876 66.667 0.00 0.00 0.00 6.13
323 324 3.585990 CATCAACGCCCATCCCGC 61.586 66.667 0.00 0.00 0.00 6.13
324 325 2.901840 CCATCAACGCCCATCCCG 60.902 66.667 0.00 0.00 0.00 5.14
325 326 2.519302 CCCATCAACGCCCATCCC 60.519 66.667 0.00 0.00 0.00 3.85
326 327 2.519302 CCCCATCAACGCCCATCC 60.519 66.667 0.00 0.00 0.00 3.51
327 328 2.519302 CCCCCATCAACGCCCATC 60.519 66.667 0.00 0.00 0.00 3.51
328 329 3.346734 ACCCCCATCAACGCCCAT 61.347 61.111 0.00 0.00 0.00 4.00
329 330 4.358841 CACCCCCATCAACGCCCA 62.359 66.667 0.00 0.00 0.00 5.36
330 331 3.358932 ATCACCCCCATCAACGCCC 62.359 63.158 0.00 0.00 0.00 6.13
331 332 2.120909 CATCACCCCCATCAACGCC 61.121 63.158 0.00 0.00 0.00 5.68
332 333 2.120909 CCATCACCCCCATCAACGC 61.121 63.158 0.00 0.00 0.00 4.84
333 334 0.464373 CTCCATCACCCCCATCAACG 60.464 60.000 0.00 0.00 0.00 4.10
334 335 0.625849 ACTCCATCACCCCCATCAAC 59.374 55.000 0.00 0.00 0.00 3.18
335 336 0.625316 CACTCCATCACCCCCATCAA 59.375 55.000 0.00 0.00 0.00 2.57
336 337 1.925285 GCACTCCATCACCCCCATCA 61.925 60.000 0.00 0.00 0.00 3.07
337 338 1.152881 GCACTCCATCACCCCCATC 60.153 63.158 0.00 0.00 0.00 3.51
338 339 3.010144 GCACTCCATCACCCCCAT 58.990 61.111 0.00 0.00 0.00 4.00
339 340 3.716195 CGCACTCCATCACCCCCA 61.716 66.667 0.00 0.00 0.00 4.96
340 341 3.717294 ACGCACTCCATCACCCCC 61.717 66.667 0.00 0.00 0.00 5.40
341 342 2.436646 CACGCACTCCATCACCCC 60.437 66.667 0.00 0.00 0.00 4.95
342 343 2.436646 CCACGCACTCCATCACCC 60.437 66.667 0.00 0.00 0.00 4.61
343 344 3.127533 GCCACGCACTCCATCACC 61.128 66.667 0.00 0.00 0.00 4.02
344 345 3.490759 CGCCACGCACTCCATCAC 61.491 66.667 0.00 0.00 0.00 3.06
345 346 4.758251 CCGCCACGCACTCCATCA 62.758 66.667 0.00 0.00 0.00 3.07
346 347 4.760047 ACCGCCACGCACTCCATC 62.760 66.667 0.00 0.00 0.00 3.51
347 348 4.329545 AACCGCCACGCACTCCAT 62.330 61.111 0.00 0.00 0.00 3.41
349 350 4.980805 TCAACCGCCACGCACTCC 62.981 66.667 0.00 0.00 0.00 3.85
350 351 2.740714 GATCAACCGCCACGCACTC 61.741 63.158 0.00 0.00 0.00 3.51
351 352 2.742372 GATCAACCGCCACGCACT 60.742 61.111 0.00 0.00 0.00 4.40
352 353 3.799755 GGATCAACCGCCACGCAC 61.800 66.667 0.00 0.00 0.00 5.34
361 362 2.124695 GCACCTCCCGGATCAACC 60.125 66.667 0.73 0.00 0.00 3.77
362 363 1.097547 CATGCACCTCCCGGATCAAC 61.098 60.000 0.73 0.00 0.00 3.18
363 364 1.224315 CATGCACCTCCCGGATCAA 59.776 57.895 0.73 0.00 0.00 2.57
364 365 2.745308 CCATGCACCTCCCGGATCA 61.745 63.158 0.73 0.00 0.00 2.92
365 366 2.111878 CCATGCACCTCCCGGATC 59.888 66.667 0.73 0.00 0.00 3.36
366 367 2.692368 ACCATGCACCTCCCGGAT 60.692 61.111 0.73 0.00 0.00 4.18
367 368 3.399181 GACCATGCACCTCCCGGA 61.399 66.667 0.73 0.00 0.00 5.14
368 369 3.402681 AGACCATGCACCTCCCGG 61.403 66.667 0.00 0.00 0.00 5.73
369 370 2.124983 CAGACCATGCACCTCCCG 60.125 66.667 0.00 0.00 0.00 5.14
370 371 1.078143 GACAGACCATGCACCTCCC 60.078 63.158 0.00 0.00 0.00 4.30
371 372 1.078143 GGACAGACCATGCACCTCC 60.078 63.158 0.00 0.00 38.79 4.30
372 373 0.107945 GAGGACAGACCATGCACCTC 60.108 60.000 0.00 0.00 43.55 3.85
373 374 0.546267 AGAGGACAGACCATGCACCT 60.546 55.000 0.00 0.00 40.32 4.00
374 375 0.392193 CAGAGGACAGACCATGCACC 60.392 60.000 0.00 0.00 42.04 5.01
375 376 0.392193 CCAGAGGACAGACCATGCAC 60.392 60.000 0.00 0.00 42.04 4.57
376 377 1.985614 CCAGAGGACAGACCATGCA 59.014 57.895 0.00 0.00 42.04 3.96
377 378 1.451028 GCCAGAGGACAGACCATGC 60.451 63.158 0.00 0.00 42.04 4.06
378 379 1.489481 TAGCCAGAGGACAGACCATG 58.511 55.000 0.00 0.00 42.04 3.66
379 380 2.045524 CATAGCCAGAGGACAGACCAT 58.954 52.381 0.00 0.00 42.04 3.55
380 381 1.489481 CATAGCCAGAGGACAGACCA 58.511 55.000 0.00 0.00 42.04 4.02
381 382 0.105778 GCATAGCCAGAGGACAGACC 59.894 60.000 0.00 0.00 39.35 3.85
382 383 1.118838 AGCATAGCCAGAGGACAGAC 58.881 55.000 0.00 0.00 0.00 3.51
383 384 1.483827 CAAGCATAGCCAGAGGACAGA 59.516 52.381 0.00 0.00 0.00 3.41
384 385 1.474677 CCAAGCATAGCCAGAGGACAG 60.475 57.143 0.00 0.00 0.00 3.51
385 386 0.543277 CCAAGCATAGCCAGAGGACA 59.457 55.000 0.00 0.00 0.00 4.02
386 387 0.179034 CCCAAGCATAGCCAGAGGAC 60.179 60.000 0.00 0.00 0.00 3.85
387 388 1.348008 CCCCAAGCATAGCCAGAGGA 61.348 60.000 0.00 0.00 0.00 3.71
388 389 1.150081 CCCCAAGCATAGCCAGAGG 59.850 63.158 0.00 0.00 0.00 3.69
389 390 0.769873 ATCCCCAAGCATAGCCAGAG 59.230 55.000 0.00 0.00 0.00 3.35
390 391 0.475475 CATCCCCAAGCATAGCCAGA 59.525 55.000 0.00 0.00 0.00 3.86
391 392 0.538977 CCATCCCCAAGCATAGCCAG 60.539 60.000 0.00 0.00 0.00 4.85
392 393 0.992970 TCCATCCCCAAGCATAGCCA 60.993 55.000 0.00 0.00 0.00 4.75
393 394 0.407139 ATCCATCCCCAAGCATAGCC 59.593 55.000 0.00 0.00 0.00 3.93
394 395 1.831580 GATCCATCCCCAAGCATAGC 58.168 55.000 0.00 0.00 0.00 2.97
395 396 1.349026 ACGATCCATCCCCAAGCATAG 59.651 52.381 0.00 0.00 0.00 2.23
396 397 1.347707 GACGATCCATCCCCAAGCATA 59.652 52.381 0.00 0.00 0.00 3.14
397 398 0.109342 GACGATCCATCCCCAAGCAT 59.891 55.000 0.00 0.00 0.00 3.79
398 399 1.526887 GACGATCCATCCCCAAGCA 59.473 57.895 0.00 0.00 0.00 3.91
399 400 1.227973 GGACGATCCATCCCCAAGC 60.228 63.158 0.00 0.00 36.28 4.01
400 401 2.220953 TGGACGATCCATCCCCAAG 58.779 57.895 7.96 0.00 42.67 3.61
401 402 4.490266 TGGACGATCCATCCCCAA 57.510 55.556 7.96 0.00 42.67 4.12
408 409 1.338020 CGATCATGACTGGACGATCCA 59.662 52.381 0.00 6.57 45.98 3.41
409 410 1.336332 CCGATCATGACTGGACGATCC 60.336 57.143 9.02 0.00 36.96 3.36
410 411 1.336332 CCCGATCATGACTGGACGATC 60.336 57.143 15.06 0.00 0.00 3.69
411 412 0.676184 CCCGATCATGACTGGACGAT 59.324 55.000 15.06 0.00 0.00 3.73
412 413 2.016393 GCCCGATCATGACTGGACGA 62.016 60.000 15.06 0.00 0.00 4.20
413 414 1.592669 GCCCGATCATGACTGGACG 60.593 63.158 15.06 8.37 0.00 4.79
414 415 1.592669 CGCCCGATCATGACTGGAC 60.593 63.158 15.06 4.25 0.00 4.02
415 416 2.796193 CCGCCCGATCATGACTGGA 61.796 63.158 15.06 0.00 0.00 3.86
416 417 2.280389 CCGCCCGATCATGACTGG 60.280 66.667 0.00 2.36 0.00 4.00
417 418 2.969238 GCCGCCCGATCATGACTG 60.969 66.667 0.00 0.00 0.00 3.51
418 419 4.241555 GGCCGCCCGATCATGACT 62.242 66.667 0.00 0.00 0.00 3.41
419 420 4.241555 AGGCCGCCCGATCATGAC 62.242 66.667 5.55 0.00 35.76 3.06
420 421 4.240103 CAGGCCGCCCGATCATGA 62.240 66.667 5.55 0.00 35.76 3.07
421 422 4.240103 TCAGGCCGCCCGATCATG 62.240 66.667 5.55 0.00 35.76 3.07
422 423 4.241555 GTCAGGCCGCCCGATCAT 62.242 66.667 5.55 0.00 35.76 2.45
429 430 3.959991 GAGAAGGTGTCAGGCCGCC 62.960 68.421 0.00 0.00 35.13 6.13
430 431 2.435059 GAGAAGGTGTCAGGCCGC 60.435 66.667 0.00 0.00 0.00 6.53
431 432 2.125912 CGAGAAGGTGTCAGGCCG 60.126 66.667 0.00 0.00 0.00 6.13
432 433 0.951040 CAACGAGAAGGTGTCAGGCC 60.951 60.000 0.00 0.00 31.48 5.19
433 434 0.951040 CCAACGAGAAGGTGTCAGGC 60.951 60.000 0.00 0.00 35.24 4.85
434 435 0.393077 ACCAACGAGAAGGTGTCAGG 59.607 55.000 0.00 0.00 36.60 3.86
435 436 3.989104 ACCAACGAGAAGGTGTCAG 57.011 52.632 0.00 0.00 36.60 3.51
440 441 1.663695 CAACACACCAACGAGAAGGT 58.336 50.000 0.00 0.00 39.10 3.50
441 442 0.944386 CCAACACACCAACGAGAAGG 59.056 55.000 0.00 0.00 0.00 3.46
442 443 0.944386 CCCAACACACCAACGAGAAG 59.056 55.000 0.00 0.00 0.00 2.85
443 444 1.098712 GCCCAACACACCAACGAGAA 61.099 55.000 0.00 0.00 0.00 2.87
444 445 1.525077 GCCCAACACACCAACGAGA 60.525 57.895 0.00 0.00 0.00 4.04
445 446 1.380403 TTGCCCAACACACCAACGAG 61.380 55.000 0.00 0.00 0.00 4.18
446 447 1.378646 TTGCCCAACACACCAACGA 60.379 52.632 0.00 0.00 0.00 3.85
447 448 1.065600 CTTGCCCAACACACCAACG 59.934 57.895 0.00 0.00 0.00 4.10
448 449 1.039856 ATCTTGCCCAACACACCAAC 58.960 50.000 0.00 0.00 0.00 3.77
449 450 1.039068 CATCTTGCCCAACACACCAA 58.961 50.000 0.00 0.00 0.00 3.67
450 451 0.184692 TCATCTTGCCCAACACACCA 59.815 50.000 0.00 0.00 0.00 4.17
451 452 0.598065 GTCATCTTGCCCAACACACC 59.402 55.000 0.00 0.00 0.00 4.16
452 453 1.001378 GTGTCATCTTGCCCAACACAC 60.001 52.381 0.00 0.00 39.91 3.82
453 454 1.317613 GTGTCATCTTGCCCAACACA 58.682 50.000 0.00 0.00 39.91 3.72
454 455 0.598065 GGTGTCATCTTGCCCAACAC 59.402 55.000 0.00 0.00 39.53 3.32
455 456 0.888736 CGGTGTCATCTTGCCCAACA 60.889 55.000 0.00 0.00 0.00 3.33
456 457 1.586154 CCGGTGTCATCTTGCCCAAC 61.586 60.000 0.00 0.00 0.00 3.77
457 458 1.303236 CCGGTGTCATCTTGCCCAA 60.303 57.895 0.00 0.00 0.00 4.12
458 459 1.561769 ATCCGGTGTCATCTTGCCCA 61.562 55.000 0.00 0.00 0.00 5.36
459 460 0.468226 TATCCGGTGTCATCTTGCCC 59.532 55.000 0.00 0.00 0.00 5.36
460 461 2.146342 CATATCCGGTGTCATCTTGCC 58.854 52.381 0.00 0.00 0.00 4.52
461 462 2.146342 CCATATCCGGTGTCATCTTGC 58.854 52.381 0.00 0.00 0.00 4.01
462 463 3.475566 ACCATATCCGGTGTCATCTTG 57.524 47.619 0.00 0.00 38.07 3.02
471 472 1.476833 GCATCAACCACCATATCCGGT 60.477 52.381 0.00 0.00 41.07 5.28
472 473 1.238439 GCATCAACCACCATATCCGG 58.762 55.000 0.00 0.00 0.00 5.14
473 474 1.965935 TGCATCAACCACCATATCCG 58.034 50.000 0.00 0.00 0.00 4.18
474 475 4.397420 TGTATGCATCAACCACCATATCC 58.603 43.478 0.19 0.00 0.00 2.59
475 476 4.456911 CCTGTATGCATCAACCACCATATC 59.543 45.833 0.19 0.00 0.00 1.63
476 477 4.104579 TCCTGTATGCATCAACCACCATAT 59.895 41.667 0.19 0.00 0.00 1.78
477 478 3.457749 TCCTGTATGCATCAACCACCATA 59.542 43.478 0.19 0.00 0.00 2.74
478 479 2.241941 TCCTGTATGCATCAACCACCAT 59.758 45.455 0.19 0.00 0.00 3.55
479 480 1.632920 TCCTGTATGCATCAACCACCA 59.367 47.619 0.19 0.00 0.00 4.17
480 481 2.092968 TCTCCTGTATGCATCAACCACC 60.093 50.000 0.19 0.00 0.00 4.61
481 482 3.201290 CTCTCCTGTATGCATCAACCAC 58.799 50.000 0.19 0.00 0.00 4.16
482 483 2.420547 GCTCTCCTGTATGCATCAACCA 60.421 50.000 0.19 0.00 0.00 3.67
483 484 2.216898 GCTCTCCTGTATGCATCAACC 58.783 52.381 0.19 0.00 0.00 3.77
484 485 2.910199 TGCTCTCCTGTATGCATCAAC 58.090 47.619 0.19 0.00 0.00 3.18
485 486 3.135167 TCATGCTCTCCTGTATGCATCAA 59.865 43.478 0.19 0.00 43.24 2.57
486 487 2.701951 TCATGCTCTCCTGTATGCATCA 59.298 45.455 0.19 0.10 43.24 3.07
487 488 3.065655 GTCATGCTCTCCTGTATGCATC 58.934 50.000 0.19 0.00 43.24 3.91
488 489 2.547430 CGTCATGCTCTCCTGTATGCAT 60.547 50.000 3.79 3.79 45.57 3.96
489 490 1.202452 CGTCATGCTCTCCTGTATGCA 60.202 52.381 0.00 0.00 39.83 3.96
490 491 1.495878 CGTCATGCTCTCCTGTATGC 58.504 55.000 0.00 0.00 31.58 3.14
491 492 1.410517 ACCGTCATGCTCTCCTGTATG 59.589 52.381 0.00 0.00 0.00 2.39
492 493 1.781786 ACCGTCATGCTCTCCTGTAT 58.218 50.000 0.00 0.00 0.00 2.29
493 494 2.298610 CTACCGTCATGCTCTCCTGTA 58.701 52.381 0.00 0.00 0.00 2.74
494 495 1.107114 CTACCGTCATGCTCTCCTGT 58.893 55.000 0.00 0.00 0.00 4.00
495 496 0.249238 GCTACCGTCATGCTCTCCTG 60.249 60.000 0.00 0.00 0.00 3.86
496 497 0.396417 AGCTACCGTCATGCTCTCCT 60.396 55.000 0.00 0.00 30.41 3.69
497 498 0.249238 CAGCTACCGTCATGCTCTCC 60.249 60.000 0.00 0.00 34.51 3.71
498 499 0.249238 CCAGCTACCGTCATGCTCTC 60.249 60.000 0.00 0.00 34.51 3.20
499 500 1.680522 CCCAGCTACCGTCATGCTCT 61.681 60.000 0.00 0.00 34.51 4.09
500 501 1.227380 CCCAGCTACCGTCATGCTC 60.227 63.158 0.00 0.00 34.51 4.26
501 502 2.735772 CCCCAGCTACCGTCATGCT 61.736 63.158 0.00 0.00 37.56 3.79
502 503 2.203070 CCCCAGCTACCGTCATGC 60.203 66.667 0.00 0.00 0.00 4.06
503 504 0.251916 TTTCCCCAGCTACCGTCATG 59.748 55.000 0.00 0.00 0.00 3.07
504 505 0.252197 GTTTCCCCAGCTACCGTCAT 59.748 55.000 0.00 0.00 0.00 3.06
505 506 1.675219 GTTTCCCCAGCTACCGTCA 59.325 57.895 0.00 0.00 0.00 4.35
506 507 1.078637 GGTTTCCCCAGCTACCGTC 60.079 63.158 0.00 0.00 0.00 4.79
507 508 3.075186 GGTTTCCCCAGCTACCGT 58.925 61.111 0.00 0.00 0.00 4.83
517 518 0.393448 GAGCCGAGATAGGGTTTCCC 59.607 60.000 0.00 0.00 45.90 3.97
518 519 0.393448 GGAGCCGAGATAGGGTTTCC 59.607 60.000 0.00 0.00 42.85 3.13
519 520 0.032267 CGGAGCCGAGATAGGGTTTC 59.968 60.000 2.00 0.00 42.85 2.78
520 521 0.686769 ACGGAGCCGAGATAGGGTTT 60.687 55.000 16.83 0.00 42.85 3.27
521 522 1.076192 ACGGAGCCGAGATAGGGTT 60.076 57.895 16.83 0.00 42.85 4.11
522 523 1.828660 CACGGAGCCGAGATAGGGT 60.829 63.158 16.83 0.00 45.90 4.34
523 524 1.797211 GACACGGAGCCGAGATAGGG 61.797 65.000 16.83 0.00 42.83 3.53
524 525 0.820074 AGACACGGAGCCGAGATAGG 60.820 60.000 16.83 0.62 42.83 2.57
525 526 1.025812 AAGACACGGAGCCGAGATAG 58.974 55.000 16.83 2.68 42.83 2.08
526 527 0.738975 CAAGACACGGAGCCGAGATA 59.261 55.000 16.83 0.00 42.83 1.98
527 528 0.965866 TCAAGACACGGAGCCGAGAT 60.966 55.000 16.83 0.00 42.83 2.75
528 529 1.587043 CTCAAGACACGGAGCCGAGA 61.587 60.000 16.83 2.97 42.83 4.04
529 530 1.153939 CTCAAGACACGGAGCCGAG 60.154 63.158 16.83 10.53 42.83 4.63
530 531 0.607217 TACTCAAGACACGGAGCCGA 60.607 55.000 16.83 0.00 42.83 5.54
531 532 0.179161 CTACTCAAGACACGGAGCCG 60.179 60.000 7.48 7.48 46.03 5.52
532 533 0.889306 ACTACTCAAGACACGGAGCC 59.111 55.000 0.00 0.00 34.48 4.70
533 534 1.540267 TCACTACTCAAGACACGGAGC 59.460 52.381 0.00 0.00 34.48 4.70
534 535 3.440522 TCATCACTACTCAAGACACGGAG 59.559 47.826 0.00 0.00 37.18 4.63
535 536 3.418047 TCATCACTACTCAAGACACGGA 58.582 45.455 0.00 0.00 0.00 4.69
536 537 3.850122 TCATCACTACTCAAGACACGG 57.150 47.619 0.00 0.00 0.00 4.94
537 538 4.795795 GTCATCATCACTACTCAAGACACG 59.204 45.833 0.00 0.00 0.00 4.49
538 539 4.795795 CGTCATCATCACTACTCAAGACAC 59.204 45.833 0.00 0.00 0.00 3.67
539 540 4.675408 GCGTCATCATCACTACTCAAGACA 60.675 45.833 0.00 0.00 0.00 3.41
540 541 3.794028 GCGTCATCATCACTACTCAAGAC 59.206 47.826 0.00 0.00 0.00 3.01
541 542 3.181486 GGCGTCATCATCACTACTCAAGA 60.181 47.826 0.00 0.00 0.00 3.02
542 543 3.119291 GGCGTCATCATCACTACTCAAG 58.881 50.000 0.00 0.00 0.00 3.02
543 544 2.760650 AGGCGTCATCATCACTACTCAA 59.239 45.455 0.00 0.00 0.00 3.02
544 545 2.359214 GAGGCGTCATCATCACTACTCA 59.641 50.000 0.52 0.00 0.00 3.41
545 546 2.621055 AGAGGCGTCATCATCACTACTC 59.379 50.000 9.41 0.00 0.00 2.59
546 547 2.660572 AGAGGCGTCATCATCACTACT 58.339 47.619 9.41 0.00 0.00 2.57
547 548 3.057876 CCTAGAGGCGTCATCATCACTAC 60.058 52.174 9.41 0.00 0.00 2.73
548 549 3.149981 CCTAGAGGCGTCATCATCACTA 58.850 50.000 9.41 0.00 0.00 2.74
549 550 1.959985 CCTAGAGGCGTCATCATCACT 59.040 52.381 9.41 0.00 0.00 3.41
550 551 1.683917 ACCTAGAGGCGTCATCATCAC 59.316 52.381 9.41 0.00 39.32 3.06
551 552 1.683385 CACCTAGAGGCGTCATCATCA 59.317 52.381 9.41 0.00 39.32 3.07
552 553 1.604185 GCACCTAGAGGCGTCATCATC 60.604 57.143 9.41 0.00 39.32 2.92
553 554 0.390860 GCACCTAGAGGCGTCATCAT 59.609 55.000 9.41 0.00 39.32 2.45
554 555 1.676678 GGCACCTAGAGGCGTCATCA 61.677 60.000 9.41 0.00 39.32 3.07
555 556 1.068250 GGCACCTAGAGGCGTCATC 59.932 63.158 9.41 0.00 39.32 2.92
556 557 3.221222 GGCACCTAGAGGCGTCAT 58.779 61.111 9.41 0.00 39.32 3.06
561 562 1.889573 GATTGCGGCACCTAGAGGC 60.890 63.158 0.05 0.00 39.32 4.70
562 563 0.179000 AAGATTGCGGCACCTAGAGG 59.821 55.000 0.05 0.00 42.17 3.69
563 564 1.293924 CAAGATTGCGGCACCTAGAG 58.706 55.000 0.05 0.00 0.00 2.43
564 565 0.613260 ACAAGATTGCGGCACCTAGA 59.387 50.000 0.05 0.00 0.00 2.43
565 566 0.729116 CACAAGATTGCGGCACCTAG 59.271 55.000 0.05 0.00 0.00 3.02
566 567 0.676466 CCACAAGATTGCGGCACCTA 60.676 55.000 0.05 0.00 0.00 3.08
567 568 1.973281 CCACAAGATTGCGGCACCT 60.973 57.895 0.05 0.00 0.00 4.00
568 569 1.971167 TCCACAAGATTGCGGCACC 60.971 57.895 0.05 0.00 30.55 5.01
569 570 1.210155 GTCCACAAGATTGCGGCAC 59.790 57.895 0.05 0.00 30.55 5.01
570 571 2.324330 CGTCCACAAGATTGCGGCA 61.324 57.895 0.00 0.00 30.55 5.69
571 572 2.480555 CGTCCACAAGATTGCGGC 59.519 61.111 0.00 0.00 30.55 6.53
572 573 3.039202 GCCGTCCACAAGATTGCGG 62.039 63.158 0.00 0.00 41.79 5.69
573 574 2.324330 TGCCGTCCACAAGATTGCG 61.324 57.895 0.00 0.00 0.00 4.85
574 575 1.210155 GTGCCGTCCACAAGATTGC 59.790 57.895 0.00 0.00 44.06 3.56
575 576 1.497278 CGTGCCGTCCACAAGATTG 59.503 57.895 4.63 0.00 44.91 2.67
576 577 2.325082 GCGTGCCGTCCACAAGATT 61.325 57.895 4.63 0.00 44.91 2.40
577 578 2.742372 GCGTGCCGTCCACAAGAT 60.742 61.111 4.63 0.00 44.91 2.40
578 579 3.741830 TTGCGTGCCGTCCACAAGA 62.742 57.895 4.63 0.00 44.91 3.02
579 580 2.829206 TTTGCGTGCCGTCCACAAG 61.829 57.895 4.63 0.00 44.91 3.16
580 581 2.824489 TTTGCGTGCCGTCCACAA 60.824 55.556 4.63 0.00 44.91 3.33
581 582 3.578272 GTTTGCGTGCCGTCCACA 61.578 61.111 4.63 0.00 44.91 4.17
582 583 4.659874 CGTTTGCGTGCCGTCCAC 62.660 66.667 0.00 0.00 41.15 4.02
612 613 2.109126 GCACAACCGGATCTGAGCC 61.109 63.158 9.46 0.82 0.00 4.70
613 614 2.456119 CGCACAACCGGATCTGAGC 61.456 63.158 9.46 11.63 0.00 4.26
614 615 2.456119 GCGCACAACCGGATCTGAG 61.456 63.158 9.46 0.00 0.00 3.35
615 616 2.434185 GCGCACAACCGGATCTGA 60.434 61.111 9.46 0.00 0.00 3.27
616 617 3.853330 CGCGCACAACCGGATCTG 61.853 66.667 9.46 4.75 0.00 2.90
617 618 4.373116 ACGCGCACAACCGGATCT 62.373 61.111 9.46 0.00 0.00 2.75
618 619 4.147322 CACGCGCACAACCGGATC 62.147 66.667 9.46 0.00 0.00 3.36
625 626 4.706608 TATGCCCCACGCGCACAA 62.707 61.111 5.73 0.00 42.08 3.33
627 628 4.830765 TCTATGCCCCACGCGCAC 62.831 66.667 5.73 0.00 42.08 5.34
628 629 3.807631 GATCTATGCCCCACGCGCA 62.808 63.158 5.73 0.00 42.08 6.09
629 630 3.044305 GATCTATGCCCCACGCGC 61.044 66.667 5.73 0.00 42.08 6.86
630 631 2.734723 CGATCTATGCCCCACGCG 60.735 66.667 3.53 3.53 42.08 6.01
631 632 2.357517 CCGATCTATGCCCCACGC 60.358 66.667 0.00 0.00 38.31 5.34
632 633 2.343758 CCCGATCTATGCCCCACG 59.656 66.667 0.00 0.00 0.00 4.94
633 634 2.032681 GCCCGATCTATGCCCCAC 59.967 66.667 0.00 0.00 0.00 4.61
634 635 3.249189 GGCCCGATCTATGCCCCA 61.249 66.667 0.00 0.00 39.30 4.96
635 636 4.394712 CGGCCCGATCTATGCCCC 62.395 72.222 0.00 0.00 42.29 5.80
636 637 4.394712 CCGGCCCGATCTATGCCC 62.395 72.222 3.71 0.00 42.29 5.36
637 638 4.394712 CCCGGCCCGATCTATGCC 62.395 72.222 3.71 6.88 41.85 4.40
639 640 3.625897 TGCCCGGCCCGATCTATG 61.626 66.667 3.71 0.00 0.00 2.23
640 641 3.626924 GTGCCCGGCCCGATCTAT 61.627 66.667 3.71 0.00 0.00 1.98
666 667 1.206578 CAGTTGGTTACCGCGCAAG 59.793 57.895 8.75 0.00 43.44 4.01
667 668 2.255172 CCAGTTGGTTACCGCGCAA 61.255 57.895 8.75 0.00 0.00 4.85
668 669 2.666862 CCAGTTGGTTACCGCGCA 60.667 61.111 8.75 0.00 0.00 6.09
669 670 3.428282 CCCAGTTGGTTACCGCGC 61.428 66.667 0.00 0.00 0.00 6.86
670 671 3.428282 GCCCAGTTGGTTACCGCG 61.428 66.667 0.00 0.00 36.04 6.46
671 672 3.428282 CGCCCAGTTGGTTACCGC 61.428 66.667 0.00 0.00 36.04 5.68
672 673 2.031465 ACGCCCAGTTGGTTACCG 59.969 61.111 0.00 0.00 36.04 4.02
673 674 1.969589 CCACGCCCAGTTGGTTACC 60.970 63.158 0.00 0.00 36.04 2.85
674 675 2.622962 GCCACGCCCAGTTGGTTAC 61.623 63.158 0.00 0.00 36.04 2.50
675 676 2.281900 GCCACGCCCAGTTGGTTA 60.282 61.111 0.00 0.00 36.04 2.85
676 677 4.514585 TGCCACGCCCAGTTGGTT 62.515 61.111 0.00 0.00 36.04 3.67
677 678 4.954970 CTGCCACGCCCAGTTGGT 62.955 66.667 0.00 0.00 36.04 3.67
678 679 4.954970 ACTGCCACGCCCAGTTGG 62.955 66.667 0.00 0.00 40.45 3.77
681 682 2.123897 AAAACTGCCACGCCCAGT 60.124 55.556 0.00 0.00 44.92 4.00
682 683 2.336088 CAAAACTGCCACGCCCAG 59.664 61.111 0.00 0.00 36.41 4.45
683 684 3.222855 CCAAAACTGCCACGCCCA 61.223 61.111 0.00 0.00 0.00 5.36
684 685 3.989787 CCCAAAACTGCCACGCCC 61.990 66.667 0.00 0.00 0.00 6.13
685 686 2.304901 AAACCCAAAACTGCCACGCC 62.305 55.000 0.00 0.00 0.00 5.68
686 687 0.874175 GAAACCCAAAACTGCCACGC 60.874 55.000 0.00 0.00 0.00 5.34
687 688 0.457851 TGAAACCCAAAACTGCCACG 59.542 50.000 0.00 0.00 0.00 4.94
688 689 2.158971 ACATGAAACCCAAAACTGCCAC 60.159 45.455 0.00 0.00 0.00 5.01
689 690 2.102252 GACATGAAACCCAAAACTGCCA 59.898 45.455 0.00 0.00 0.00 4.92
690 691 2.102252 TGACATGAAACCCAAAACTGCC 59.898 45.455 0.00 0.00 0.00 4.85
691 692 3.181476 ACTGACATGAAACCCAAAACTGC 60.181 43.478 0.00 0.00 0.00 4.40
692 693 4.097741 TCACTGACATGAAACCCAAAACTG 59.902 41.667 0.00 0.00 0.00 3.16
693 694 4.097892 GTCACTGACATGAAACCCAAAACT 59.902 41.667 0.00 0.00 32.09 2.66
694 695 4.359706 GTCACTGACATGAAACCCAAAAC 58.640 43.478 0.00 0.00 32.09 2.43
695 696 3.383185 GGTCACTGACATGAAACCCAAAA 59.617 43.478 11.34 0.00 33.68 2.44
696 697 2.955660 GGTCACTGACATGAAACCCAAA 59.044 45.455 11.34 0.00 33.68 3.28
697 698 2.092158 TGGTCACTGACATGAAACCCAA 60.092 45.455 11.34 0.00 33.68 4.12
698 699 1.492599 TGGTCACTGACATGAAACCCA 59.507 47.619 11.34 0.00 33.68 4.51
699 700 2.154462 CTGGTCACTGACATGAAACCC 58.846 52.381 11.34 0.00 33.68 4.11
700 701 2.154462 CCTGGTCACTGACATGAAACC 58.846 52.381 11.34 0.00 33.68 3.27
701 702 2.851195 ACCTGGTCACTGACATGAAAC 58.149 47.619 11.34 0.00 33.68 2.78
702 703 3.213506 CAACCTGGTCACTGACATGAAA 58.786 45.455 11.34 0.00 33.68 2.69
703 704 2.487086 CCAACCTGGTCACTGACATGAA 60.487 50.000 11.34 0.00 33.68 2.57
704 705 1.072173 CCAACCTGGTCACTGACATGA 59.928 52.381 11.34 0.00 33.68 3.07
705 706 1.527034 CCAACCTGGTCACTGACATG 58.473 55.000 11.34 0.00 33.68 3.21
706 707 0.250901 GCCAACCTGGTCACTGACAT 60.251 55.000 11.34 0.00 40.46 3.06
707 708 1.148273 GCCAACCTGGTCACTGACA 59.852 57.895 11.34 0.00 40.46 3.58
708 709 1.600916 GGCCAACCTGGTCACTGAC 60.601 63.158 0.00 0.00 42.98 3.51
709 710 2.836154 GGCCAACCTGGTCACTGA 59.164 61.111 0.00 0.00 42.98 3.41
710 711 2.669569 CGGCCAACCTGGTCACTG 60.670 66.667 2.24 0.00 43.88 3.66
711 712 3.953775 CCGGCCAACCTGGTCACT 61.954 66.667 2.24 0.00 43.88 3.41
712 713 4.265056 ACCGGCCAACCTGGTCAC 62.265 66.667 0.00 0.00 43.88 3.67
713 714 4.263572 CACCGGCCAACCTGGTCA 62.264 66.667 0.00 0.00 43.88 4.02
714 715 3.268103 ATCACCGGCCAACCTGGTC 62.268 63.158 0.00 0.00 39.76 4.02
715 716 3.256960 ATCACCGGCCAACCTGGT 61.257 61.111 0.00 0.00 41.61 4.00
716 717 2.751436 CATCACCGGCCAACCTGG 60.751 66.667 0.00 0.00 41.55 4.45
717 718 3.443045 GCATCACCGGCCAACCTG 61.443 66.667 0.00 0.00 0.00 4.00
724 725 3.211963 GACATGGGCATCACCGGC 61.212 66.667 0.00 0.00 40.62 6.13
725 726 0.108396 TATGACATGGGCATCACCGG 59.892 55.000 0.00 0.00 40.62 5.28
726 727 1.808343 CATATGACATGGGCATCACCG 59.192 52.381 0.00 0.00 40.62 4.94
727 728 2.165167 CCATATGACATGGGCATCACC 58.835 52.381 3.65 0.00 35.58 4.02
735 736 2.363038 CAAGCCAACCCATATGACATGG 59.637 50.000 3.65 9.89 38.88 3.66
736 737 3.025978 ACAAGCCAACCCATATGACATG 58.974 45.455 3.65 0.00 0.00 3.21
737 738 3.053395 AGACAAGCCAACCCATATGACAT 60.053 43.478 3.65 0.00 0.00 3.06
738 739 2.308570 AGACAAGCCAACCCATATGACA 59.691 45.455 3.65 0.00 0.00 3.58
739 740 3.004752 AGACAAGCCAACCCATATGAC 57.995 47.619 3.65 0.00 0.00 3.06
740 741 3.737559 AAGACAAGCCAACCCATATGA 57.262 42.857 3.65 0.00 0.00 2.15
741 742 3.511146 ACAAAGACAAGCCAACCCATATG 59.489 43.478 0.00 0.00 0.00 1.78
742 743 3.778265 ACAAAGACAAGCCAACCCATAT 58.222 40.909 0.00 0.00 0.00 1.78
743 744 3.237268 ACAAAGACAAGCCAACCCATA 57.763 42.857 0.00 0.00 0.00 2.74
744 745 2.086610 ACAAAGACAAGCCAACCCAT 57.913 45.000 0.00 0.00 0.00 4.00
745 746 1.859302 AACAAAGACAAGCCAACCCA 58.141 45.000 0.00 0.00 0.00 4.51
746 747 2.979814 AAACAAAGACAAGCCAACCC 57.020 45.000 0.00 0.00 0.00 4.11
747 748 3.802139 GCTAAAACAAAGACAAGCCAACC 59.198 43.478 0.00 0.00 0.00 3.77
748 749 3.802139 GGCTAAAACAAAGACAAGCCAAC 59.198 43.478 6.30 0.00 46.95 3.77
749 750 4.053469 GGCTAAAACAAAGACAAGCCAA 57.947 40.909 6.30 0.00 46.95 4.52
750 751 3.726291 GGCTAAAACAAAGACAAGCCA 57.274 42.857 6.30 0.00 46.95 4.75
752 753 3.068165 ACCAGGCTAAAACAAAGACAAGC 59.932 43.478 0.00 0.00 0.00 4.01
753 754 4.918810 ACCAGGCTAAAACAAAGACAAG 57.081 40.909 0.00 0.00 0.00 3.16
754 755 5.669164 AAACCAGGCTAAAACAAAGACAA 57.331 34.783 0.00 0.00 0.00 3.18
755 756 5.669164 AAAACCAGGCTAAAACAAAGACA 57.331 34.783 0.00 0.00 0.00 3.41
756 757 5.231357 CGAAAAACCAGGCTAAAACAAAGAC 59.769 40.000 0.00 0.00 0.00 3.01
757 758 5.105675 ACGAAAAACCAGGCTAAAACAAAGA 60.106 36.000 0.00 0.00 0.00 2.52
758 759 5.106442 ACGAAAAACCAGGCTAAAACAAAG 58.894 37.500 0.00 0.00 0.00 2.77
759 760 5.074584 ACGAAAAACCAGGCTAAAACAAA 57.925 34.783 0.00 0.00 0.00 2.83
760 761 4.158025 TGACGAAAAACCAGGCTAAAACAA 59.842 37.500 0.00 0.00 0.00 2.83
761 762 3.695060 TGACGAAAAACCAGGCTAAAACA 59.305 39.130 0.00 0.00 0.00 2.83
762 763 4.295857 TGACGAAAAACCAGGCTAAAAC 57.704 40.909 0.00 0.00 0.00 2.43
763 764 4.985538 TTGACGAAAAACCAGGCTAAAA 57.014 36.364 0.00 0.00 0.00 1.52
764 765 5.523438 AATTGACGAAAAACCAGGCTAAA 57.477 34.783 0.00 0.00 0.00 1.85
765 766 6.636562 TTAATTGACGAAAAACCAGGCTAA 57.363 33.333 0.00 0.00 0.00 3.09
766 767 6.402766 CGATTAATTGACGAAAAACCAGGCTA 60.403 38.462 0.00 0.00 0.00 3.93
767 768 5.619086 CGATTAATTGACGAAAAACCAGGCT 60.619 40.000 0.00 0.00 0.00 4.58
768 769 4.557301 CGATTAATTGACGAAAAACCAGGC 59.443 41.667 0.00 0.00 0.00 4.85
769 770 5.092781 CCGATTAATTGACGAAAAACCAGG 58.907 41.667 4.10 0.00 0.00 4.45
770 771 5.793457 GTCCGATTAATTGACGAAAAACCAG 59.207 40.000 4.10 0.00 0.00 4.00
771 772 5.238868 TGTCCGATTAATTGACGAAAAACCA 59.761 36.000 4.10 0.00 0.00 3.67
772 773 5.691815 TGTCCGATTAATTGACGAAAAACC 58.308 37.500 4.10 0.00 0.00 3.27
773 774 7.790861 ATTGTCCGATTAATTGACGAAAAAC 57.209 32.000 4.10 0.00 0.00 2.43
774 775 8.804688 AAATTGTCCGATTAATTGACGAAAAA 57.195 26.923 4.10 0.00 0.00 1.94
775 776 8.804688 AAAATTGTCCGATTAATTGACGAAAA 57.195 26.923 4.10 0.00 0.00 2.29
776 777 8.804688 AAAAATTGTCCGATTAATTGACGAAA 57.195 26.923 4.10 0.61 0.00 3.46
802 803 9.558396 ACTTGCCATTTTCATTGATTAAGAAAA 57.442 25.926 0.00 0.00 43.05 2.29
803 804 9.206870 GACTTGCCATTTTCATTGATTAAGAAA 57.793 29.630 0.00 0.00 0.00 2.52
804 805 8.587608 AGACTTGCCATTTTCATTGATTAAGAA 58.412 29.630 0.00 0.00 0.00 2.52
805 806 8.125978 AGACTTGCCATTTTCATTGATTAAGA 57.874 30.769 0.00 0.00 0.00 2.10
806 807 8.767478 AAGACTTGCCATTTTCATTGATTAAG 57.233 30.769 0.00 0.00 0.00 1.85
807 808 9.558396 AAAAGACTTGCCATTTTCATTGATTAA 57.442 25.926 0.00 0.00 0.00 1.40
809 810 8.992073 GTAAAAGACTTGCCATTTTCATTGATT 58.008 29.630 0.00 0.00 0.00 2.57
810 811 8.370182 AGTAAAAGACTTGCCATTTTCATTGAT 58.630 29.630 0.00 0.00 33.13 2.57
811 812 7.725251 AGTAAAAGACTTGCCATTTTCATTGA 58.275 30.769 0.00 0.00 33.13 2.57
812 813 7.951530 AGTAAAAGACTTGCCATTTTCATTG 57.048 32.000 0.00 0.00 33.13 2.82
861 862 9.498307 CCATGTAGACGGTATAAATTTTGTTTC 57.502 33.333 0.00 0.00 0.00 2.78
862 863 8.463607 CCCATGTAGACGGTATAAATTTTGTTT 58.536 33.333 0.00 0.00 0.00 2.83
863 864 7.612633 ACCCATGTAGACGGTATAAATTTTGTT 59.387 33.333 0.00 0.00 0.00 2.83
864 865 7.066525 CACCCATGTAGACGGTATAAATTTTGT 59.933 37.037 0.00 0.00 0.00 2.83
865 866 7.066525 ACACCCATGTAGACGGTATAAATTTTG 59.933 37.037 0.00 0.00 37.26 2.44
866 867 7.066525 CACACCCATGTAGACGGTATAAATTTT 59.933 37.037 0.00 0.00 36.72 1.82
867 868 6.540914 CACACCCATGTAGACGGTATAAATTT 59.459 38.462 0.00 0.00 36.72 1.82
868 869 6.053005 CACACCCATGTAGACGGTATAAATT 58.947 40.000 0.00 0.00 36.72 1.82
869 870 5.364446 TCACACCCATGTAGACGGTATAAAT 59.636 40.000 0.00 0.00 36.72 1.40
870 871 4.710865 TCACACCCATGTAGACGGTATAAA 59.289 41.667 0.00 0.00 36.72 1.40
871 872 4.279982 TCACACCCATGTAGACGGTATAA 58.720 43.478 0.00 0.00 36.72 0.98
872 873 3.887110 CTCACACCCATGTAGACGGTATA 59.113 47.826 0.00 0.00 36.72 1.47
873 874 2.693591 CTCACACCCATGTAGACGGTAT 59.306 50.000 0.00 0.00 36.72 2.73
874 875 2.097036 CTCACACCCATGTAGACGGTA 58.903 52.381 0.00 0.00 36.72 4.02
875 876 0.895530 CTCACACCCATGTAGACGGT 59.104 55.000 0.00 0.00 36.72 4.83
876 877 0.460284 GCTCACACCCATGTAGACGG 60.460 60.000 0.00 0.00 36.72 4.79
877 878 0.802222 CGCTCACACCCATGTAGACG 60.802 60.000 0.00 0.00 36.72 4.18
878 879 1.084370 GCGCTCACACCCATGTAGAC 61.084 60.000 0.00 0.00 36.72 2.59
879 880 1.218047 GCGCTCACACCCATGTAGA 59.782 57.895 0.00 0.00 36.72 2.59
880 881 1.815421 GGCGCTCACACCCATGTAG 60.815 63.158 7.64 0.00 36.72 2.74
881 882 2.267642 GGCGCTCACACCCATGTA 59.732 61.111 7.64 0.00 36.72 2.29
887 888 3.236618 GAAACACGGCGCTCACACC 62.237 63.158 6.90 0.00 0.00 4.16
888 889 2.244651 AGAAACACGGCGCTCACAC 61.245 57.895 6.90 0.00 0.00 3.82
889 890 2.108157 AGAAACACGGCGCTCACA 59.892 55.556 6.90 0.00 0.00 3.58
890 891 2.551270 CAGAAACACGGCGCTCAC 59.449 61.111 6.90 0.00 0.00 3.51
891 892 2.428960 TAGCAGAAACACGGCGCTCA 62.429 55.000 6.90 0.00 43.97 4.26
892 893 1.736645 TAGCAGAAACACGGCGCTC 60.737 57.895 6.90 0.00 43.97 5.03
893 894 2.027625 GTAGCAGAAACACGGCGCT 61.028 57.895 6.90 0.00 43.97 5.92
894 895 1.635663 ATGTAGCAGAAACACGGCGC 61.636 55.000 6.90 0.00 43.97 6.53
895 896 1.635844 TATGTAGCAGAAACACGGCG 58.364 50.000 4.80 4.80 43.97 6.46
896 897 3.002348 GGAATATGTAGCAGAAACACGGC 59.998 47.826 0.00 0.00 39.85 5.68
897 898 4.034048 GTGGAATATGTAGCAGAAACACGG 59.966 45.833 0.00 0.00 0.00 4.94
898 899 4.034048 GGTGGAATATGTAGCAGAAACACG 59.966 45.833 0.00 0.00 0.00 4.49
899 900 4.941263 TGGTGGAATATGTAGCAGAAACAC 59.059 41.667 0.00 0.00 0.00 3.32
900 901 5.172687 TGGTGGAATATGTAGCAGAAACA 57.827 39.130 0.00 0.00 0.00 2.83
901 902 5.066505 CCTTGGTGGAATATGTAGCAGAAAC 59.933 44.000 0.00 0.00 38.35 2.78
902 903 5.192927 CCTTGGTGGAATATGTAGCAGAAA 58.807 41.667 0.00 0.00 38.35 2.52
903 904 4.385199 CCCTTGGTGGAATATGTAGCAGAA 60.385 45.833 0.00 0.00 38.35 3.02
904 905 3.136443 CCCTTGGTGGAATATGTAGCAGA 59.864 47.826 0.00 0.00 38.35 4.26
905 906 3.117888 ACCCTTGGTGGAATATGTAGCAG 60.118 47.826 0.00 0.00 38.35 4.24
906 907 2.849943 ACCCTTGGTGGAATATGTAGCA 59.150 45.455 0.00 0.00 38.35 3.49
907 908 3.577805 ACCCTTGGTGGAATATGTAGC 57.422 47.619 0.00 0.00 38.35 3.58
919 920 4.938756 TGCCCCTCCACCCTTGGT 62.939 66.667 0.00 0.00 44.35 3.67
920 921 3.350163 ATGCCCCTCCACCCTTGG 61.350 66.667 0.00 0.00 45.56 3.61
921 922 2.153898 TTGATGCCCCTCCACCCTTG 62.154 60.000 0.00 0.00 0.00 3.61
922 923 1.856873 TTGATGCCCCTCCACCCTT 60.857 57.895 0.00 0.00 0.00 3.95
923 924 2.204291 TTGATGCCCCTCCACCCT 60.204 61.111 0.00 0.00 0.00 4.34
924 925 2.276740 CTTGATGCCCCTCCACCC 59.723 66.667 0.00 0.00 0.00 4.61
925 926 2.276740 CCTTGATGCCCCTCCACC 59.723 66.667 0.00 0.00 0.00 4.61
926 927 1.649271 ATCCCTTGATGCCCCTCCAC 61.649 60.000 0.00 0.00 0.00 4.02
927 928 1.309013 ATCCCTTGATGCCCCTCCA 60.309 57.895 0.00 0.00 0.00 3.86
928 929 1.152368 CATCCCTTGATGCCCCTCC 59.848 63.158 0.00 0.00 41.81 4.30
929 930 0.179006 GTCATCCCTTGATGCCCCTC 60.179 60.000 0.00 0.00 46.60 4.30
930 931 0.920763 TGTCATCCCTTGATGCCCCT 60.921 55.000 0.00 0.00 46.60 4.79
967 968 4.368808 CAACGAACGCGGGCACAG 62.369 66.667 12.47 0.00 43.17 3.66
1172 1173 8.432805 AGAGAAAGGTCTTTGAAATCTCTACAA 58.567 33.333 5.04 0.00 31.32 2.41
1209 1210 1.483415 TGGACCTGGTTATAAGCGGAC 59.517 52.381 22.26 17.68 34.80 4.79
1212 1213 4.007659 ACTTTTGGACCTGGTTATAAGCG 58.992 43.478 9.94 5.14 0.00 4.68
1288 1289 7.514784 TCTTCATAATGATGGCATTAGTTGG 57.485 36.000 0.00 0.00 46.80 3.77
1303 1304 3.893813 GGCCAAGGCATCTTCTTCATAAT 59.106 43.478 13.87 0.00 44.11 1.28
1313 1314 0.471591 TGGTTTTGGCCAAGGCATCT 60.472 50.000 19.48 0.00 44.11 2.90
1314 1315 0.320683 GTGGTTTTGGCCAAGGCATC 60.321 55.000 19.48 7.95 44.11 3.91
1315 1316 1.754107 GTGGTTTTGGCCAAGGCAT 59.246 52.632 19.48 0.00 44.11 4.40
1463 4971 4.920640 TCGGACTCTAAGGCATCTTTAG 57.079 45.455 0.00 0.00 34.59 1.85
1517 5025 2.290577 GGGAGATCTGACCTTTGCAAGT 60.291 50.000 0.00 0.00 0.00 3.16
1572 5080 1.258982 GACTCATCCGTTAATGCAGCG 59.741 52.381 0.00 0.00 0.00 5.18
1641 5153 3.224884 CGGAATAAACCCACGCAATTT 57.775 42.857 0.00 0.00 0.00 1.82
1674 5186 6.822667 ATGAGCAACACTATTTTGATGACA 57.177 33.333 0.00 0.00 0.00 3.58
1738 5250 2.642700 GAACACGGCGCAACCAAT 59.357 55.556 10.83 0.00 39.03 3.16



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.