Multiple sequence alignment - TraesCS3A01G181900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G181900 chr3A 100.000 3443 0 0 1 3443 210262047 210258605 0.000000e+00 6359.0
1 TraesCS3A01G181900 chr3D 95.774 2721 79 17 755 3443 172383485 172380769 0.000000e+00 4355.0
2 TraesCS3A01G181900 chr3D 94.521 146 8 0 605 750 81841415 81841560 3.460000e-55 226.0
3 TraesCS3A01G181900 chr3D 82.843 204 29 5 283 484 526190291 526190490 9.820000e-41 178.0
4 TraesCS3A01G181900 chr3D 90.411 73 5 2 471 543 172383601 172383531 1.020000e-15 95.3
5 TraesCS3A01G181900 chr3B 95.387 2710 75 20 764 3443 250819643 250816954 0.000000e+00 4266.0
6 TraesCS3A01G181900 chr3B 94.595 37 1 1 488 524 250820299 250820264 4.800000e-04 56.5
7 TraesCS3A01G181900 chr7A 76.852 432 81 13 8 433 510900776 510901194 3.460000e-55 226.0
8 TraesCS3A01G181900 chr5A 91.195 159 12 2 605 762 351326817 351326974 7.480000e-52 215.0
9 TraesCS3A01G181900 chr4A 91.195 159 12 2 605 762 621398404 621398247 7.480000e-52 215.0
10 TraesCS3A01G181900 chr4A 82.949 217 33 3 287 502 733536320 733536107 3.510000e-45 193.0
11 TraesCS3A01G181900 chr4A 81.776 214 31 7 287 499 647419321 647419527 4.570000e-39 172.0
12 TraesCS3A01G181900 chr7D 91.613 155 12 1 605 758 554577773 554577619 2.690000e-51 213.0
13 TraesCS3A01G181900 chr6A 91.613 155 12 1 605 758 426635650 426635804 2.690000e-51 213.0
14 TraesCS3A01G181900 chr6A 91.026 156 13 1 605 759 104307115 104306960 3.480000e-50 209.0
15 TraesCS3A01G181900 chr6A 77.083 288 46 15 221 501 154048799 154048525 7.700000e-32 148.0
16 TraesCS3A01G181900 chr2D 91.139 158 13 1 605 761 194750386 194750543 2.690000e-51 213.0
17 TraesCS3A01G181900 chr2A 91.613 155 12 1 605 758 30311793 30311639 2.690000e-51 213.0
18 TraesCS3A01G181900 chr1A 91.558 154 12 1 605 757 2651456 2651303 9.680000e-51 211.0
19 TraesCS3A01G181900 chr1B 74.850 501 96 25 8 500 22398739 22399217 2.100000e-47 200.0
20 TraesCS3A01G181900 chr1B 74.651 501 97 25 8 500 22606845 22607323 9.750000e-46 195.0
21 TraesCS3A01G181900 chr1B 74.052 501 100 26 8 500 22458752 22459230 9.820000e-41 178.0
22 TraesCS3A01G181900 chr4D 81.735 219 34 5 287 504 84754582 84754795 9.820000e-41 178.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G181900 chr3A 210258605 210262047 3442 True 6359.00 6359 100.0000 1 3443 1 chr3A.!!$R1 3442
1 TraesCS3A01G181900 chr3D 172380769 172383601 2832 True 2225.15 4355 93.0925 471 3443 2 chr3D.!!$R1 2972
2 TraesCS3A01G181900 chr3B 250816954 250820299 3345 True 2161.25 4266 94.9910 488 3443 2 chr3B.!!$R1 2955

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
65 66 0.032117 TGTCTCCCATGTCCGATCCT 60.032 55.0 0.00 0.00 0.00 3.24 F
125 126 0.034767 AGGTGTGTCTCCGTCGGATA 60.035 55.0 15.81 4.53 0.00 2.59 F
161 162 0.037605 GTGTCGGTCTTCGGTGGATT 60.038 55.0 0.00 0.00 39.77 3.01 F
356 357 0.044702 ATGAGGGAGGGGTGATGACA 59.955 55.0 0.00 0.00 0.00 3.58 F
933 1364 0.104672 ACCATCCCATATCCGACCCA 60.105 55.0 0.00 0.00 0.00 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1031 1462 0.823356 GGAGTTTGCTGCCAAGGTGA 60.823 55.000 0.00 0.0 31.52 4.02 R
1674 2105 2.282462 ACAGGGCCCAAAGAAGCG 60.282 61.111 27.56 3.7 0.00 4.68 R
1911 2342 4.551702 AACAAACAGAGCAAAACCCTTT 57.448 36.364 0.00 0.0 0.00 3.11 R
2302 2733 3.094572 CAGAAGACCCTGAATTTGGCAT 58.905 45.455 0.00 0.0 36.29 4.40 R
2460 2891 5.746990 AGCTTCTACAGTTAGGACACATT 57.253 39.130 0.00 0.0 0.00 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.700037 GGCGACGATGTCTCTCAG 57.300 61.111 0.00 0.00 0.00 3.35
32 33 1.803943 GGCGACGATGTCTCTCAGT 59.196 57.895 0.00 0.00 0.00 3.41
33 34 1.015109 GGCGACGATGTCTCTCAGTA 58.985 55.000 0.00 0.00 0.00 2.74
34 35 1.003331 GGCGACGATGTCTCTCAGTAG 60.003 57.143 0.00 0.00 0.00 2.57
35 36 1.934525 GCGACGATGTCTCTCAGTAGA 59.065 52.381 0.00 0.00 0.00 2.59
52 53 9.290988 TCTCAGTAGAGTATGAATAATGTCTCC 57.709 37.037 0.00 0.00 42.66 3.71
53 54 8.410673 TCAGTAGAGTATGAATAATGTCTCCC 57.589 38.462 0.00 0.00 0.00 4.30
54 55 8.004801 TCAGTAGAGTATGAATAATGTCTCCCA 58.995 37.037 0.00 0.00 0.00 4.37
55 56 8.811017 CAGTAGAGTATGAATAATGTCTCCCAT 58.189 37.037 0.00 0.00 34.36 4.00
56 57 8.811017 AGTAGAGTATGAATAATGTCTCCCATG 58.189 37.037 0.00 0.00 32.82 3.66
57 58 7.623999 AGAGTATGAATAATGTCTCCCATGT 57.376 36.000 0.00 0.00 32.82 3.21
58 59 7.675062 AGAGTATGAATAATGTCTCCCATGTC 58.325 38.462 0.00 0.00 32.82 3.06
59 60 6.773638 AGTATGAATAATGTCTCCCATGTCC 58.226 40.000 0.00 0.00 32.82 4.02
60 61 4.071961 TGAATAATGTCTCCCATGTCCG 57.928 45.455 0.00 0.00 32.82 4.79
61 62 3.709141 TGAATAATGTCTCCCATGTCCGA 59.291 43.478 0.00 0.00 32.82 4.55
62 63 4.347876 TGAATAATGTCTCCCATGTCCGAT 59.652 41.667 0.00 0.00 32.82 4.18
63 64 2.918712 AATGTCTCCCATGTCCGATC 57.081 50.000 0.00 0.00 32.82 3.69
64 65 1.051812 ATGTCTCCCATGTCCGATCC 58.948 55.000 0.00 0.00 30.69 3.36
65 66 0.032117 TGTCTCCCATGTCCGATCCT 60.032 55.000 0.00 0.00 0.00 3.24
66 67 1.123928 GTCTCCCATGTCCGATCCTT 58.876 55.000 0.00 0.00 0.00 3.36
67 68 2.317040 GTCTCCCATGTCCGATCCTTA 58.683 52.381 0.00 0.00 0.00 2.69
68 69 2.900546 GTCTCCCATGTCCGATCCTTAT 59.099 50.000 0.00 0.00 0.00 1.73
69 70 3.325135 GTCTCCCATGTCCGATCCTTATT 59.675 47.826 0.00 0.00 0.00 1.40
70 71 3.973973 TCTCCCATGTCCGATCCTTATTT 59.026 43.478 0.00 0.00 0.00 1.40
71 72 4.040461 TCTCCCATGTCCGATCCTTATTTC 59.960 45.833 0.00 0.00 0.00 2.17
72 73 3.067106 CCCATGTCCGATCCTTATTTCG 58.933 50.000 0.00 0.00 35.19 3.46
73 74 3.244078 CCCATGTCCGATCCTTATTTCGA 60.244 47.826 0.00 0.00 37.55 3.71
74 75 4.563580 CCCATGTCCGATCCTTATTTCGAT 60.564 45.833 0.00 0.00 37.55 3.59
75 76 5.337250 CCCATGTCCGATCCTTATTTCGATA 60.337 44.000 0.00 0.00 37.55 2.92
76 77 5.807520 CCATGTCCGATCCTTATTTCGATAG 59.192 44.000 0.00 0.00 37.55 2.08
77 78 6.390721 CATGTCCGATCCTTATTTCGATAGT 58.609 40.000 0.00 0.00 37.55 2.12
78 79 5.769367 TGTCCGATCCTTATTTCGATAGTG 58.231 41.667 0.00 0.00 37.55 2.74
79 80 4.621886 GTCCGATCCTTATTTCGATAGTGC 59.378 45.833 0.00 0.00 37.55 4.40
80 81 3.608506 CCGATCCTTATTTCGATAGTGCG 59.391 47.826 0.00 0.00 37.55 5.34
81 82 4.227538 CGATCCTTATTTCGATAGTGCGT 58.772 43.478 0.00 0.00 37.55 5.24
82 83 4.321217 CGATCCTTATTTCGATAGTGCGTC 59.679 45.833 0.00 0.00 37.55 5.19
83 84 4.913335 TCCTTATTTCGATAGTGCGTCT 57.087 40.909 0.00 0.00 37.40 4.18
84 85 6.570672 ATCCTTATTTCGATAGTGCGTCTA 57.429 37.500 0.00 0.00 37.40 2.59
85 86 5.998553 TCCTTATTTCGATAGTGCGTCTAG 58.001 41.667 0.00 0.00 37.40 2.43
99 100 2.710760 CGTCTAGCATCGTCAGAAGAC 58.289 52.381 0.00 0.00 41.46 3.01
108 109 3.498676 GTCAGAAGACGTGTGGAGG 57.501 57.895 0.00 0.00 34.60 4.30
109 110 0.674534 GTCAGAAGACGTGTGGAGGT 59.325 55.000 0.00 0.00 34.60 3.85
110 111 0.673985 TCAGAAGACGTGTGGAGGTG 59.326 55.000 0.00 0.00 0.00 4.00
111 112 0.389391 CAGAAGACGTGTGGAGGTGT 59.611 55.000 0.00 0.00 0.00 4.16
112 113 0.389391 AGAAGACGTGTGGAGGTGTG 59.611 55.000 0.00 0.00 0.00 3.82
113 114 0.104304 GAAGACGTGTGGAGGTGTGT 59.896 55.000 0.00 0.00 0.00 3.72
114 115 0.104304 AAGACGTGTGGAGGTGTGTC 59.896 55.000 0.00 0.00 0.00 3.67
115 116 0.755698 AGACGTGTGGAGGTGTGTCT 60.756 55.000 0.00 0.00 32.19 3.41
116 117 0.318784 GACGTGTGGAGGTGTGTCTC 60.319 60.000 0.00 0.00 0.00 3.36
121 122 2.567049 GGAGGTGTGTCTCCGTCG 59.433 66.667 0.00 0.00 43.19 5.12
122 123 2.567049 GAGGTGTGTCTCCGTCGG 59.433 66.667 4.39 4.39 0.00 4.79
123 124 1.970114 GAGGTGTGTCTCCGTCGGA 60.970 63.158 14.54 14.54 0.00 4.55
124 125 1.304217 AGGTGTGTCTCCGTCGGAT 60.304 57.895 15.81 0.00 0.00 4.18
125 126 0.034767 AGGTGTGTCTCCGTCGGATA 60.035 55.000 15.81 4.53 0.00 2.59
126 127 0.381089 GGTGTGTCTCCGTCGGATAG 59.619 60.000 15.81 4.09 0.00 2.08
127 128 0.248539 GTGTGTCTCCGTCGGATAGC 60.249 60.000 15.81 8.55 0.00 2.97
128 129 0.678684 TGTGTCTCCGTCGGATAGCA 60.679 55.000 15.81 11.09 0.00 3.49
129 130 0.248539 GTGTCTCCGTCGGATAGCAC 60.249 60.000 15.81 18.41 0.00 4.40
130 131 0.678684 TGTCTCCGTCGGATAGCACA 60.679 55.000 15.81 12.23 0.00 4.57
131 132 0.454600 GTCTCCGTCGGATAGCACAA 59.545 55.000 15.81 0.00 0.00 3.33
132 133 0.738975 TCTCCGTCGGATAGCACAAG 59.261 55.000 15.81 0.00 0.00 3.16
133 134 0.738975 CTCCGTCGGATAGCACAAGA 59.261 55.000 15.81 0.00 0.00 3.02
134 135 1.338337 CTCCGTCGGATAGCACAAGAT 59.662 52.381 15.81 0.00 0.00 2.40
135 136 1.337071 TCCGTCGGATAGCACAAGATC 59.663 52.381 10.71 0.00 0.00 2.75
136 137 1.603172 CCGTCGGATAGCACAAGATCC 60.603 57.143 4.91 0.00 38.65 3.36
137 138 1.067060 CGTCGGATAGCACAAGATCCA 59.933 52.381 2.10 0.00 41.61 3.41
138 139 2.481276 CGTCGGATAGCACAAGATCCAA 60.481 50.000 2.10 0.00 41.61 3.53
139 140 3.733337 GTCGGATAGCACAAGATCCAAT 58.267 45.455 2.10 0.00 41.61 3.16
140 141 3.743396 GTCGGATAGCACAAGATCCAATC 59.257 47.826 2.10 0.00 41.61 2.67
141 142 2.733552 CGGATAGCACAAGATCCAATCG 59.266 50.000 2.10 0.00 41.61 3.34
142 143 3.070018 GGATAGCACAAGATCCAATCGG 58.930 50.000 0.00 0.00 41.24 4.18
143 144 3.495100 GGATAGCACAAGATCCAATCGGT 60.495 47.826 0.00 0.00 41.24 4.69
144 145 1.742761 AGCACAAGATCCAATCGGTG 58.257 50.000 9.15 9.15 40.23 4.94
145 146 1.003580 AGCACAAGATCCAATCGGTGT 59.996 47.619 12.85 5.54 39.78 4.16
146 147 1.398390 GCACAAGATCCAATCGGTGTC 59.602 52.381 12.85 5.67 39.78 3.67
147 148 1.660607 CACAAGATCCAATCGGTGTCG 59.339 52.381 0.00 0.00 35.87 4.35
148 149 1.290203 CAAGATCCAATCGGTGTCGG 58.710 55.000 0.00 0.00 36.95 4.79
149 150 0.902531 AAGATCCAATCGGTGTCGGT 59.097 50.000 0.00 0.00 36.95 4.69
150 151 0.460311 AGATCCAATCGGTGTCGGTC 59.540 55.000 0.00 0.00 36.95 4.79
151 152 0.460311 GATCCAATCGGTGTCGGTCT 59.540 55.000 0.00 0.00 36.95 3.85
152 153 0.902531 ATCCAATCGGTGTCGGTCTT 59.097 50.000 0.00 0.00 36.95 3.01
153 154 0.245539 TCCAATCGGTGTCGGTCTTC 59.754 55.000 0.00 0.00 36.95 2.87
154 155 1.076533 CCAATCGGTGTCGGTCTTCG 61.077 60.000 0.00 0.00 40.90 3.79
155 156 1.076533 CAATCGGTGTCGGTCTTCGG 61.077 60.000 0.00 0.00 39.77 4.30
156 157 1.530013 AATCGGTGTCGGTCTTCGGT 61.530 55.000 0.00 0.00 39.77 4.69
157 158 2.209064 ATCGGTGTCGGTCTTCGGTG 62.209 60.000 0.00 0.00 39.77 4.94
158 159 2.048503 GGTGTCGGTCTTCGGTGG 60.049 66.667 0.00 0.00 39.77 4.61
159 160 2.567497 GGTGTCGGTCTTCGGTGGA 61.567 63.158 0.00 0.00 39.77 4.02
160 161 1.590147 GTGTCGGTCTTCGGTGGAT 59.410 57.895 0.00 0.00 39.77 3.41
161 162 0.037605 GTGTCGGTCTTCGGTGGATT 60.038 55.000 0.00 0.00 39.77 3.01
162 163 0.682852 TGTCGGTCTTCGGTGGATTT 59.317 50.000 0.00 0.00 39.77 2.17
163 164 1.076332 GTCGGTCTTCGGTGGATTTG 58.924 55.000 0.00 0.00 39.77 2.32
164 165 0.682852 TCGGTCTTCGGTGGATTTGT 59.317 50.000 0.00 0.00 39.77 2.83
165 166 1.076332 CGGTCTTCGGTGGATTTGTC 58.924 55.000 0.00 0.00 34.75 3.18
166 167 1.337823 CGGTCTTCGGTGGATTTGTCT 60.338 52.381 0.00 0.00 34.75 3.41
167 168 2.076863 GGTCTTCGGTGGATTTGTCTG 58.923 52.381 0.00 0.00 0.00 3.51
168 169 2.076863 GTCTTCGGTGGATTTGTCTGG 58.923 52.381 0.00 0.00 0.00 3.86
169 170 1.974957 TCTTCGGTGGATTTGTCTGGA 59.025 47.619 0.00 0.00 0.00 3.86
170 171 2.571653 TCTTCGGTGGATTTGTCTGGAT 59.428 45.455 0.00 0.00 0.00 3.41
171 172 2.691409 TCGGTGGATTTGTCTGGATC 57.309 50.000 0.00 0.00 0.00 3.36
172 173 2.187958 TCGGTGGATTTGTCTGGATCT 58.812 47.619 0.00 0.00 0.00 2.75
173 174 3.371034 TCGGTGGATTTGTCTGGATCTA 58.629 45.455 0.00 0.00 0.00 1.98
174 175 3.384789 TCGGTGGATTTGTCTGGATCTAG 59.615 47.826 0.00 0.00 0.00 2.43
175 176 3.133003 CGGTGGATTTGTCTGGATCTAGT 59.867 47.826 5.93 0.00 0.00 2.57
176 177 4.341235 CGGTGGATTTGTCTGGATCTAGTA 59.659 45.833 5.93 0.00 0.00 1.82
177 178 5.011125 CGGTGGATTTGTCTGGATCTAGTAT 59.989 44.000 5.93 0.00 0.00 2.12
178 179 6.463049 CGGTGGATTTGTCTGGATCTAGTATT 60.463 42.308 5.93 0.00 0.00 1.89
179 180 6.931840 GGTGGATTTGTCTGGATCTAGTATTC 59.068 42.308 5.93 0.00 0.00 1.75
180 181 6.642950 GTGGATTTGTCTGGATCTAGTATTCG 59.357 42.308 5.93 0.00 0.00 3.34
181 182 6.549736 TGGATTTGTCTGGATCTAGTATTCGA 59.450 38.462 5.93 0.00 0.00 3.71
182 183 7.233553 TGGATTTGTCTGGATCTAGTATTCGAT 59.766 37.037 5.93 0.00 0.00 3.59
183 184 7.757624 GGATTTGTCTGGATCTAGTATTCGATC 59.242 40.741 5.93 4.31 36.24 3.69
184 185 5.864628 TGTCTGGATCTAGTATTCGATCG 57.135 43.478 9.36 9.36 37.50 3.69
185 186 5.306394 TGTCTGGATCTAGTATTCGATCGT 58.694 41.667 15.94 0.00 37.50 3.73
186 187 5.179555 TGTCTGGATCTAGTATTCGATCGTG 59.820 44.000 15.94 0.00 37.50 4.35
187 188 5.179742 GTCTGGATCTAGTATTCGATCGTGT 59.820 44.000 15.94 7.59 37.50 4.49
188 189 5.179555 TCTGGATCTAGTATTCGATCGTGTG 59.820 44.000 15.94 0.41 37.50 3.82
189 190 4.215613 TGGATCTAGTATTCGATCGTGTGG 59.784 45.833 15.94 0.96 37.50 4.17
190 191 4.215827 GGATCTAGTATTCGATCGTGTGGT 59.784 45.833 15.94 1.26 37.50 4.16
191 192 5.278364 GGATCTAGTATTCGATCGTGTGGTT 60.278 44.000 15.94 0.84 37.50 3.67
192 193 6.072838 GGATCTAGTATTCGATCGTGTGGTTA 60.073 42.308 15.94 1.97 37.50 2.85
193 194 6.052840 TCTAGTATTCGATCGTGTGGTTAC 57.947 41.667 15.94 8.86 0.00 2.50
194 195 4.707030 AGTATTCGATCGTGTGGTTACA 57.293 40.909 15.94 0.00 0.00 2.41
195 196 5.063180 AGTATTCGATCGTGTGGTTACAA 57.937 39.130 15.94 0.00 38.82 2.41
196 197 5.100259 AGTATTCGATCGTGTGGTTACAAG 58.900 41.667 15.94 0.00 38.82 3.16
197 198 3.374220 TTCGATCGTGTGGTTACAAGT 57.626 42.857 15.94 0.00 38.82 3.16
198 199 3.374220 TCGATCGTGTGGTTACAAGTT 57.626 42.857 15.94 0.00 38.82 2.66
199 200 3.719924 TCGATCGTGTGGTTACAAGTTT 58.280 40.909 15.94 0.00 38.82 2.66
200 201 3.491639 TCGATCGTGTGGTTACAAGTTTG 59.508 43.478 15.94 0.00 38.82 2.93
201 202 3.491639 CGATCGTGTGGTTACAAGTTTGA 59.508 43.478 7.03 0.00 38.82 2.69
202 203 4.151689 CGATCGTGTGGTTACAAGTTTGAT 59.848 41.667 7.03 0.00 38.82 2.57
203 204 5.607119 ATCGTGTGGTTACAAGTTTGATC 57.393 39.130 0.00 0.00 38.82 2.92
204 205 3.810941 TCGTGTGGTTACAAGTTTGATCC 59.189 43.478 0.00 0.00 38.82 3.36
205 206 3.813166 CGTGTGGTTACAAGTTTGATCCT 59.187 43.478 0.00 0.00 38.82 3.24
206 207 4.274950 CGTGTGGTTACAAGTTTGATCCTT 59.725 41.667 0.00 0.00 38.82 3.36
207 208 5.220970 CGTGTGGTTACAAGTTTGATCCTTT 60.221 40.000 0.00 0.00 38.82 3.11
208 209 6.206498 GTGTGGTTACAAGTTTGATCCTTTC 58.794 40.000 0.00 0.00 38.82 2.62
209 210 5.008217 TGTGGTTACAAGTTTGATCCTTTCG 59.992 40.000 0.00 0.00 32.88 3.46
210 211 5.237779 GTGGTTACAAGTTTGATCCTTTCGA 59.762 40.000 0.00 0.00 0.00 3.71
211 212 6.001460 TGGTTACAAGTTTGATCCTTTCGAT 58.999 36.000 0.00 0.00 0.00 3.59
212 213 6.148811 TGGTTACAAGTTTGATCCTTTCGATC 59.851 38.462 0.00 0.00 46.70 3.69
213 214 6.371825 GGTTACAAGTTTGATCCTTTCGATCT 59.628 38.462 0.00 0.00 46.65 2.75
214 215 7.548075 GGTTACAAGTTTGATCCTTTCGATCTA 59.452 37.037 0.00 0.00 46.65 1.98
215 216 9.099454 GTTACAAGTTTGATCCTTTCGATCTAT 57.901 33.333 0.00 0.00 46.65 1.98
216 217 9.667107 TTACAAGTTTGATCCTTTCGATCTATT 57.333 29.630 0.00 0.00 46.65 1.73
217 218 8.202745 ACAAGTTTGATCCTTTCGATCTATTC 57.797 34.615 0.00 0.00 46.65 1.75
218 219 8.043710 ACAAGTTTGATCCTTTCGATCTATTCT 58.956 33.333 0.00 0.00 46.65 2.40
219 220 8.547069 CAAGTTTGATCCTTTCGATCTATTCTC 58.453 37.037 1.77 0.00 46.65 2.87
220 221 7.213678 AGTTTGATCCTTTCGATCTATTCTCC 58.786 38.462 1.77 0.00 46.65 3.71
221 222 5.730296 TGATCCTTTCGATCTATTCTCCC 57.270 43.478 1.77 0.00 46.65 4.30
222 223 5.398236 TGATCCTTTCGATCTATTCTCCCT 58.602 41.667 1.77 0.00 46.65 4.20
223 224 5.841237 TGATCCTTTCGATCTATTCTCCCTT 59.159 40.000 1.77 0.00 46.65 3.95
224 225 5.793030 TCCTTTCGATCTATTCTCCCTTC 57.207 43.478 0.00 0.00 0.00 3.46
225 226 4.589374 TCCTTTCGATCTATTCTCCCTTCC 59.411 45.833 0.00 0.00 0.00 3.46
226 227 4.551388 CTTTCGATCTATTCTCCCTTCCG 58.449 47.826 0.00 0.00 0.00 4.30
227 228 3.503800 TCGATCTATTCTCCCTTCCGA 57.496 47.619 0.00 0.00 0.00 4.55
228 229 4.035612 TCGATCTATTCTCCCTTCCGAT 57.964 45.455 0.00 0.00 0.00 4.18
229 230 4.011023 TCGATCTATTCTCCCTTCCGATC 58.989 47.826 0.00 0.00 0.00 3.69
230 231 4.013728 CGATCTATTCTCCCTTCCGATCT 58.986 47.826 0.00 0.00 0.00 2.75
231 232 5.045797 TCGATCTATTCTCCCTTCCGATCTA 60.046 44.000 0.00 0.00 0.00 1.98
232 233 5.825679 CGATCTATTCTCCCTTCCGATCTAT 59.174 44.000 0.00 0.00 0.00 1.98
233 234 6.320164 CGATCTATTCTCCCTTCCGATCTATT 59.680 42.308 0.00 0.00 0.00 1.73
234 235 7.468084 CGATCTATTCTCCCTTCCGATCTATTC 60.468 44.444 0.00 0.00 0.00 1.75
235 236 6.795590 TCTATTCTCCCTTCCGATCTATTCT 58.204 40.000 0.00 0.00 0.00 2.40
236 237 5.993748 ATTCTCCCTTCCGATCTATTCTC 57.006 43.478 0.00 0.00 0.00 2.87
237 238 4.733077 TCTCCCTTCCGATCTATTCTCT 57.267 45.455 0.00 0.00 0.00 3.10
238 239 5.068215 TCTCCCTTCCGATCTATTCTCTT 57.932 43.478 0.00 0.00 0.00 2.85
239 240 5.459505 TCTCCCTTCCGATCTATTCTCTTT 58.540 41.667 0.00 0.00 0.00 2.52
240 241 5.536916 TCTCCCTTCCGATCTATTCTCTTTC 59.463 44.000 0.00 0.00 0.00 2.62
241 242 5.208890 TCCCTTCCGATCTATTCTCTTTCA 58.791 41.667 0.00 0.00 0.00 2.69
242 243 5.841237 TCCCTTCCGATCTATTCTCTTTCAT 59.159 40.000 0.00 0.00 0.00 2.57
243 244 6.327626 TCCCTTCCGATCTATTCTCTTTCATT 59.672 38.462 0.00 0.00 0.00 2.57
244 245 6.426328 CCCTTCCGATCTATTCTCTTTCATTG 59.574 42.308 0.00 0.00 0.00 2.82
245 246 6.426328 CCTTCCGATCTATTCTCTTTCATTGG 59.574 42.308 0.00 0.00 0.00 3.16
246 247 6.485830 TCCGATCTATTCTCTTTCATTGGT 57.514 37.500 0.00 0.00 0.00 3.67
247 248 6.283694 TCCGATCTATTCTCTTTCATTGGTG 58.716 40.000 0.00 0.00 0.00 4.17
248 249 6.098266 TCCGATCTATTCTCTTTCATTGGTGA 59.902 38.462 0.00 0.00 0.00 4.02
249 250 6.933521 CCGATCTATTCTCTTTCATTGGTGAT 59.066 38.462 0.00 0.00 33.56 3.06
250 251 7.095313 CCGATCTATTCTCTTTCATTGGTGATG 60.095 40.741 0.00 0.00 37.08 3.07
251 252 7.095313 CGATCTATTCTCTTTCATTGGTGATGG 60.095 40.741 0.00 0.00 36.37 3.51
252 253 6.962182 TCTATTCTCTTTCATTGGTGATGGT 58.038 36.000 0.00 0.00 36.37 3.55
253 254 7.405292 TCTATTCTCTTTCATTGGTGATGGTT 58.595 34.615 0.00 0.00 36.37 3.67
254 255 5.710513 TTCTCTTTCATTGGTGATGGTTG 57.289 39.130 0.00 0.00 36.37 3.77
255 256 4.728772 TCTCTTTCATTGGTGATGGTTGT 58.271 39.130 0.00 0.00 36.37 3.32
256 257 5.139727 TCTCTTTCATTGGTGATGGTTGTT 58.860 37.500 0.00 0.00 36.37 2.83
257 258 5.009911 TCTCTTTCATTGGTGATGGTTGTTG 59.990 40.000 0.00 0.00 36.37 3.33
258 259 3.383620 TTCATTGGTGATGGTTGTTGC 57.616 42.857 0.00 0.00 36.37 4.17
259 260 2.596346 TCATTGGTGATGGTTGTTGCT 58.404 42.857 0.00 0.00 36.37 3.91
260 261 2.557924 TCATTGGTGATGGTTGTTGCTC 59.442 45.455 0.00 0.00 36.37 4.26
261 262 1.327303 TTGGTGATGGTTGTTGCTCC 58.673 50.000 0.00 0.00 0.00 4.70
262 263 0.888736 TGGTGATGGTTGTTGCTCCG 60.889 55.000 0.00 0.00 0.00 4.63
263 264 1.586154 GGTGATGGTTGTTGCTCCGG 61.586 60.000 0.00 0.00 0.00 5.14
264 265 1.971167 TGATGGTTGTTGCTCCGGC 60.971 57.895 0.00 0.00 39.26 6.13
273 274 4.314440 TGCTCCGGCACACTGGTC 62.314 66.667 0.00 0.00 44.28 4.02
275 276 3.314331 CTCCGGCACACTGGTCCT 61.314 66.667 0.00 0.00 43.58 3.85
276 277 3.596066 CTCCGGCACACTGGTCCTG 62.596 68.421 0.00 0.00 43.58 3.86
277 278 3.941188 CCGGCACACTGGTCCTGT 61.941 66.667 0.00 0.00 37.57 4.00
278 279 2.666190 CGGCACACTGGTCCTGTG 60.666 66.667 23.37 23.37 41.76 3.66
279 280 2.828868 GGCACACTGGTCCTGTGA 59.171 61.111 29.66 0.00 41.43 3.58
280 281 1.302033 GGCACACTGGTCCTGTGAG 60.302 63.158 29.66 23.74 41.43 3.51
281 282 1.302033 GCACACTGGTCCTGTGAGG 60.302 63.158 29.66 21.90 41.43 3.86
282 283 2.044806 GCACACTGGTCCTGTGAGGT 62.045 60.000 29.66 9.76 41.43 3.85
283 284 0.469917 CACACTGGTCCTGTGAGGTT 59.530 55.000 29.66 9.43 41.43 3.50
284 285 0.469917 ACACTGGTCCTGTGAGGTTG 59.530 55.000 29.66 7.85 36.91 3.77
285 286 0.469917 CACTGGTCCTGTGAGGTTGT 59.530 55.000 21.22 0.00 36.53 3.32
286 287 0.759346 ACTGGTCCTGTGAGGTTGTC 59.241 55.000 0.00 0.00 36.53 3.18
287 288 0.758734 CTGGTCCTGTGAGGTTGTCA 59.241 55.000 0.00 0.00 36.53 3.58
294 295 3.491581 GTGAGGTTGTCACGACGAT 57.508 52.632 0.00 0.00 46.22 3.73
295 296 1.779569 GTGAGGTTGTCACGACGATT 58.220 50.000 0.00 0.00 46.22 3.34
296 297 1.719780 GTGAGGTTGTCACGACGATTC 59.280 52.381 0.00 0.00 46.22 2.52
297 298 1.611977 TGAGGTTGTCACGACGATTCT 59.388 47.619 0.00 0.00 0.00 2.40
298 299 2.035449 TGAGGTTGTCACGACGATTCTT 59.965 45.455 0.00 0.00 0.00 2.52
299 300 2.662156 GAGGTTGTCACGACGATTCTTC 59.338 50.000 0.00 0.00 0.00 2.87
300 301 1.725164 GGTTGTCACGACGATTCTTCC 59.275 52.381 0.00 0.00 0.00 3.46
301 302 1.725164 GTTGTCACGACGATTCTTCCC 59.275 52.381 0.00 0.00 0.00 3.97
302 303 1.254026 TGTCACGACGATTCTTCCCT 58.746 50.000 0.00 0.00 0.00 4.20
303 304 1.067846 TGTCACGACGATTCTTCCCTG 60.068 52.381 0.00 0.00 0.00 4.45
304 305 1.201647 GTCACGACGATTCTTCCCTGA 59.798 52.381 0.00 0.00 0.00 3.86
305 306 1.201647 TCACGACGATTCTTCCCTGAC 59.798 52.381 0.00 0.00 0.00 3.51
306 307 1.202582 CACGACGATTCTTCCCTGACT 59.797 52.381 0.00 0.00 0.00 3.41
307 308 2.422479 CACGACGATTCTTCCCTGACTA 59.578 50.000 0.00 0.00 0.00 2.59
308 309 3.066900 CACGACGATTCTTCCCTGACTAT 59.933 47.826 0.00 0.00 0.00 2.12
309 310 3.315749 ACGACGATTCTTCCCTGACTATC 59.684 47.826 0.00 0.00 0.00 2.08
310 311 3.566322 CGACGATTCTTCCCTGACTATCT 59.434 47.826 0.00 0.00 0.00 1.98
311 312 4.755629 CGACGATTCTTCCCTGACTATCTA 59.244 45.833 0.00 0.00 0.00 1.98
312 313 5.334260 CGACGATTCTTCCCTGACTATCTAC 60.334 48.000 0.00 0.00 0.00 2.59
313 314 5.697067 ACGATTCTTCCCTGACTATCTACT 58.303 41.667 0.00 0.00 0.00 2.57
314 315 6.839454 ACGATTCTTCCCTGACTATCTACTA 58.161 40.000 0.00 0.00 0.00 1.82
315 316 6.711645 ACGATTCTTCCCTGACTATCTACTAC 59.288 42.308 0.00 0.00 0.00 2.73
316 317 6.711194 CGATTCTTCCCTGACTATCTACTACA 59.289 42.308 0.00 0.00 0.00 2.74
317 318 7.228906 CGATTCTTCCCTGACTATCTACTACAA 59.771 40.741 0.00 0.00 0.00 2.41
318 319 8.840200 ATTCTTCCCTGACTATCTACTACAAA 57.160 34.615 0.00 0.00 0.00 2.83
319 320 8.660295 TTCTTCCCTGACTATCTACTACAAAA 57.340 34.615 0.00 0.00 0.00 2.44
320 321 8.660295 TCTTCCCTGACTATCTACTACAAAAA 57.340 34.615 0.00 0.00 0.00 1.94
321 322 8.750298 TCTTCCCTGACTATCTACTACAAAAAG 58.250 37.037 0.00 0.00 0.00 2.27
322 323 7.419711 TCCCTGACTATCTACTACAAAAAGG 57.580 40.000 0.00 0.00 0.00 3.11
323 324 6.958192 TCCCTGACTATCTACTACAAAAAGGT 59.042 38.462 0.00 0.00 0.00 3.50
324 325 7.456902 TCCCTGACTATCTACTACAAAAAGGTT 59.543 37.037 0.00 0.00 0.00 3.50
325 326 8.101419 CCCTGACTATCTACTACAAAAAGGTTT 58.899 37.037 0.00 0.00 0.00 3.27
327 328 8.319143 TGACTATCTACTACAAAAAGGTTTGC 57.681 34.615 0.00 0.00 46.84 3.68
328 329 7.389607 TGACTATCTACTACAAAAAGGTTTGCC 59.610 37.037 0.00 0.00 46.84 4.52
329 330 5.977489 ATCTACTACAAAAAGGTTTGCCC 57.023 39.130 0.00 0.00 46.84 5.36
330 331 3.816523 TCTACTACAAAAAGGTTTGCCCG 59.183 43.478 0.00 0.00 46.84 6.13
331 332 1.684450 ACTACAAAAAGGTTTGCCCGG 59.316 47.619 0.00 0.00 46.84 5.73
332 333 0.389757 TACAAAAAGGTTTGCCCGGC 59.610 50.000 1.04 1.04 46.84 6.13
333 334 1.334384 ACAAAAAGGTTTGCCCGGCT 61.334 50.000 11.61 0.00 46.84 5.52
334 335 0.599991 CAAAAAGGTTTGCCCGGCTC 60.600 55.000 11.61 1.22 37.89 4.70
335 336 1.754380 AAAAAGGTTTGCCCGGCTCC 61.754 55.000 11.61 10.47 38.74 4.70
336 337 2.937959 AAAAGGTTTGCCCGGCTCCA 62.938 55.000 11.61 0.00 38.74 3.86
337 338 2.937959 AAAGGTTTGCCCGGCTCCAA 62.938 55.000 11.61 0.00 38.74 3.53
338 339 2.679996 GGTTTGCCCGGCTCCAAT 60.680 61.111 11.61 0.00 0.00 3.16
339 340 2.573340 GTTTGCCCGGCTCCAATG 59.427 61.111 11.61 0.00 0.00 2.82
340 341 1.976474 GTTTGCCCGGCTCCAATGA 60.976 57.895 11.61 0.00 0.00 2.57
341 342 1.678635 TTTGCCCGGCTCCAATGAG 60.679 57.895 11.61 0.00 41.84 2.90
342 343 3.643595 TTGCCCGGCTCCAATGAGG 62.644 63.158 11.61 0.00 39.14 3.86
343 344 4.883354 GCCCGGCTCCAATGAGGG 62.883 72.222 0.71 0.00 44.72 4.30
344 345 3.089874 CCCGGCTCCAATGAGGGA 61.090 66.667 0.00 0.00 44.70 4.20
350 351 4.169452 TCCAATGAGGGAGGGGTG 57.831 61.111 0.00 0.00 38.24 4.61
351 352 1.478503 TCCAATGAGGGAGGGGTGA 59.521 57.895 0.00 0.00 38.24 4.02
352 353 0.046242 TCCAATGAGGGAGGGGTGAT 59.954 55.000 0.00 0.00 38.24 3.06
353 354 0.184451 CCAATGAGGGAGGGGTGATG 59.816 60.000 0.00 0.00 0.00 3.07
354 355 1.216064 CAATGAGGGAGGGGTGATGA 58.784 55.000 0.00 0.00 0.00 2.92
355 356 1.133976 CAATGAGGGAGGGGTGATGAC 60.134 57.143 0.00 0.00 0.00 3.06
356 357 0.044702 ATGAGGGAGGGGTGATGACA 59.955 55.000 0.00 0.00 0.00 3.58
357 358 0.618680 TGAGGGAGGGGTGATGACAG 60.619 60.000 0.00 0.00 0.00 3.51
358 359 1.977293 GAGGGAGGGGTGATGACAGC 61.977 65.000 0.00 0.00 42.88 4.40
359 360 2.300967 GGGAGGGGTGATGACAGCA 61.301 63.158 0.00 0.00 45.04 4.41
360 361 1.685224 GGAGGGGTGATGACAGCAA 59.315 57.895 0.00 0.00 45.04 3.91
361 362 0.678048 GGAGGGGTGATGACAGCAAC 60.678 60.000 0.00 0.00 45.04 4.17
362 363 1.003355 AGGGGTGATGACAGCAACG 60.003 57.895 2.07 0.00 45.04 4.10
363 364 2.690778 GGGGTGATGACAGCAACGC 61.691 63.158 10.19 10.19 45.04 4.84
364 365 2.476051 GGTGATGACAGCAACGCG 59.524 61.111 3.53 3.53 43.08 6.01
365 366 2.202222 GTGATGACAGCAACGCGC 60.202 61.111 5.73 0.00 42.91 6.86
366 367 3.422303 TGATGACAGCAACGCGCC 61.422 61.111 5.73 0.00 44.04 6.53
367 368 3.121030 GATGACAGCAACGCGCCT 61.121 61.111 5.73 0.00 44.04 5.52
368 369 2.669569 ATGACAGCAACGCGCCTT 60.670 55.556 5.73 0.00 44.04 4.35
369 370 2.568935 GATGACAGCAACGCGCCTTC 62.569 60.000 5.73 2.20 44.04 3.46
370 371 4.430423 GACAGCAACGCGCCTTCG 62.430 66.667 5.73 0.00 44.04 3.79
371 372 4.961511 ACAGCAACGCGCCTTCGA 62.962 61.111 5.73 0.00 44.04 3.71
372 373 4.430423 CAGCAACGCGCCTTCGAC 62.430 66.667 5.73 0.00 44.04 4.20
373 374 4.664677 AGCAACGCGCCTTCGACT 62.665 61.111 5.73 0.00 44.04 4.18
374 375 3.712881 GCAACGCGCCTTCGACTT 61.713 61.111 5.73 0.00 38.10 3.01
375 376 2.170985 CAACGCGCCTTCGACTTG 59.829 61.111 5.73 0.00 38.10 3.16
376 377 3.712881 AACGCGCCTTCGACTTGC 61.713 61.111 5.73 0.00 38.10 4.01
377 378 4.664677 ACGCGCCTTCGACTTGCT 62.665 61.111 5.73 0.00 38.10 3.91
378 379 3.414700 CGCGCCTTCGACTTGCTT 61.415 61.111 0.00 0.00 38.10 3.91
379 380 2.476499 GCGCCTTCGACTTGCTTC 59.524 61.111 0.00 0.00 38.10 3.86
380 381 2.317609 GCGCCTTCGACTTGCTTCA 61.318 57.895 0.00 0.00 38.10 3.02
381 382 1.784062 CGCCTTCGACTTGCTTCAG 59.216 57.895 0.00 0.00 38.10 3.02
382 383 0.946221 CGCCTTCGACTTGCTTCAGT 60.946 55.000 0.00 0.00 38.10 3.41
383 384 0.514691 GCCTTCGACTTGCTTCAGTG 59.485 55.000 0.00 0.00 0.00 3.66
384 385 0.514691 CCTTCGACTTGCTTCAGTGC 59.485 55.000 0.00 0.00 0.00 4.40
385 386 1.506493 CTTCGACTTGCTTCAGTGCT 58.494 50.000 0.00 0.00 0.00 4.40
386 387 1.869767 CTTCGACTTGCTTCAGTGCTT 59.130 47.619 0.00 0.00 0.00 3.91
387 388 1.220529 TCGACTTGCTTCAGTGCTTG 58.779 50.000 0.00 0.00 0.00 4.01
388 389 0.940126 CGACTTGCTTCAGTGCTTGT 59.060 50.000 0.00 0.00 0.00 3.16
389 390 2.135139 CGACTTGCTTCAGTGCTTGTA 58.865 47.619 0.00 0.00 0.00 2.41
390 391 2.156504 CGACTTGCTTCAGTGCTTGTAG 59.843 50.000 0.00 0.00 0.00 2.74
391 392 3.134458 GACTTGCTTCAGTGCTTGTAGT 58.866 45.455 0.00 0.00 0.00 2.73
392 393 3.134458 ACTTGCTTCAGTGCTTGTAGTC 58.866 45.455 0.00 0.00 0.00 2.59
393 394 1.783284 TGCTTCAGTGCTTGTAGTCG 58.217 50.000 0.00 0.00 0.00 4.18
394 395 1.068588 TGCTTCAGTGCTTGTAGTCGT 59.931 47.619 0.00 0.00 0.00 4.34
395 396 1.721926 GCTTCAGTGCTTGTAGTCGTC 59.278 52.381 0.00 0.00 0.00 4.20
396 397 1.979469 CTTCAGTGCTTGTAGTCGTCG 59.021 52.381 0.00 0.00 0.00 5.12
397 398 0.949397 TCAGTGCTTGTAGTCGTCGT 59.051 50.000 0.00 0.00 0.00 4.34
398 399 1.335810 TCAGTGCTTGTAGTCGTCGTT 59.664 47.619 0.00 0.00 0.00 3.85
399 400 2.549329 TCAGTGCTTGTAGTCGTCGTTA 59.451 45.455 0.00 0.00 0.00 3.18
400 401 2.909244 CAGTGCTTGTAGTCGTCGTTAG 59.091 50.000 0.00 0.00 0.00 2.34
401 402 2.095364 AGTGCTTGTAGTCGTCGTTAGG 60.095 50.000 0.00 0.00 0.00 2.69
402 403 1.881973 TGCTTGTAGTCGTCGTTAGGT 59.118 47.619 0.00 0.00 0.00 3.08
403 404 2.248487 GCTTGTAGTCGTCGTTAGGTG 58.752 52.381 0.00 0.00 0.00 4.00
404 405 2.860062 CTTGTAGTCGTCGTTAGGTGG 58.140 52.381 0.00 0.00 0.00 4.61
405 406 1.896220 TGTAGTCGTCGTTAGGTGGT 58.104 50.000 0.00 0.00 0.00 4.16
406 407 1.806542 TGTAGTCGTCGTTAGGTGGTC 59.193 52.381 0.00 0.00 0.00 4.02
407 408 1.131315 GTAGTCGTCGTTAGGTGGTCC 59.869 57.143 0.00 0.00 0.00 4.46
408 409 0.538057 AGTCGTCGTTAGGTGGTCCA 60.538 55.000 0.00 0.00 35.89 4.02
409 410 0.387750 GTCGTCGTTAGGTGGTCCAC 60.388 60.000 14.13 14.13 35.89 4.02
410 411 0.822944 TCGTCGTTAGGTGGTCCACA 60.823 55.000 23.48 0.66 35.86 4.17
411 412 0.388134 CGTCGTTAGGTGGTCCACAG 60.388 60.000 23.48 8.95 35.86 3.66
412 413 0.963962 GTCGTTAGGTGGTCCACAGA 59.036 55.000 23.48 7.65 35.86 3.41
413 414 0.963962 TCGTTAGGTGGTCCACAGAC 59.036 55.000 23.48 15.86 42.73 3.51
414 415 0.966920 CGTTAGGTGGTCCACAGACT 59.033 55.000 23.48 13.54 43.05 3.24
415 416 1.343465 CGTTAGGTGGTCCACAGACTT 59.657 52.381 23.48 5.99 43.05 3.01
416 417 2.767505 GTTAGGTGGTCCACAGACTTG 58.232 52.381 23.48 0.00 43.05 3.16
417 418 1.348064 TAGGTGGTCCACAGACTTGG 58.652 55.000 23.48 0.00 43.05 3.61
418 419 0.694444 AGGTGGTCCACAGACTTGGT 60.694 55.000 23.48 0.00 43.05 3.67
419 420 0.182775 GGTGGTCCACAGACTTGGTT 59.817 55.000 23.48 0.00 43.05 3.67
420 421 1.308998 GTGGTCCACAGACTTGGTTG 58.691 55.000 17.59 0.00 43.05 3.77
421 422 0.916086 TGGTCCACAGACTTGGTTGT 59.084 50.000 0.00 0.00 43.05 3.32
422 423 1.308998 GGTCCACAGACTTGGTTGTG 58.691 55.000 0.00 0.00 43.05 3.33
423 424 1.134220 GGTCCACAGACTTGGTTGTGA 60.134 52.381 6.21 0.00 45.79 3.58
424 425 2.487265 GGTCCACAGACTTGGTTGTGAT 60.487 50.000 6.21 0.00 45.79 3.06
425 426 3.214328 GTCCACAGACTTGGTTGTGATT 58.786 45.455 6.21 0.00 45.79 2.57
426 427 3.632145 GTCCACAGACTTGGTTGTGATTT 59.368 43.478 6.21 0.00 45.79 2.17
427 428 4.097892 GTCCACAGACTTGGTTGTGATTTT 59.902 41.667 6.21 0.00 45.79 1.82
428 429 4.709397 TCCACAGACTTGGTTGTGATTTTT 59.291 37.500 6.21 0.00 45.79 1.94
453 454 7.900782 TTACTTCTAGTGTTCCTTGTATTGC 57.099 36.000 0.00 0.00 0.00 3.56
454 455 6.115448 ACTTCTAGTGTTCCTTGTATTGCT 57.885 37.500 0.00 0.00 0.00 3.91
455 456 7.241042 ACTTCTAGTGTTCCTTGTATTGCTA 57.759 36.000 0.00 0.00 0.00 3.49
456 457 7.852263 ACTTCTAGTGTTCCTTGTATTGCTAT 58.148 34.615 0.00 0.00 0.00 2.97
457 458 7.766278 ACTTCTAGTGTTCCTTGTATTGCTATG 59.234 37.037 0.00 0.00 0.00 2.23
458 459 7.418337 TCTAGTGTTCCTTGTATTGCTATGA 57.582 36.000 0.00 0.00 0.00 2.15
459 460 7.265673 TCTAGTGTTCCTTGTATTGCTATGAC 58.734 38.462 0.00 0.00 0.00 3.06
460 461 6.054860 AGTGTTCCTTGTATTGCTATGACT 57.945 37.500 0.00 0.00 0.00 3.41
461 462 5.877012 AGTGTTCCTTGTATTGCTATGACTG 59.123 40.000 0.00 0.00 0.00 3.51
462 463 5.065218 GTGTTCCTTGTATTGCTATGACTGG 59.935 44.000 0.00 0.00 0.00 4.00
463 464 5.186198 GTTCCTTGTATTGCTATGACTGGT 58.814 41.667 0.00 0.00 0.00 4.00
464 465 5.435686 TCCTTGTATTGCTATGACTGGTT 57.564 39.130 0.00 0.00 0.00 3.67
465 466 6.553953 TCCTTGTATTGCTATGACTGGTTA 57.446 37.500 0.00 0.00 0.00 2.85
466 467 7.136822 TCCTTGTATTGCTATGACTGGTTAT 57.863 36.000 0.00 0.00 0.00 1.89
467 468 6.992123 TCCTTGTATTGCTATGACTGGTTATG 59.008 38.462 0.00 0.00 0.00 1.90
468 469 6.992123 CCTTGTATTGCTATGACTGGTTATGA 59.008 38.462 0.00 0.00 0.00 2.15
469 470 7.041780 CCTTGTATTGCTATGACTGGTTATGAC 60.042 40.741 0.00 0.00 0.00 3.06
470 471 7.124573 TGTATTGCTATGACTGGTTATGACT 57.875 36.000 0.00 0.00 0.00 3.41
471 472 8.245195 TGTATTGCTATGACTGGTTATGACTA 57.755 34.615 0.00 0.00 0.00 2.59
472 473 8.360390 TGTATTGCTATGACTGGTTATGACTAG 58.640 37.037 0.00 0.00 39.99 2.57
473 474 7.603180 ATTGCTATGACTGGTTATGACTAGA 57.397 36.000 8.04 0.00 37.75 2.43
474 475 7.603180 TTGCTATGACTGGTTATGACTAGAT 57.397 36.000 8.04 0.00 37.75 1.98
475 476 7.220741 TGCTATGACTGGTTATGACTAGATC 57.779 40.000 8.04 3.02 37.75 2.75
476 477 6.777580 TGCTATGACTGGTTATGACTAGATCA 59.222 38.462 8.04 8.03 43.13 2.92
477 478 7.287696 TGCTATGACTGGTTATGACTAGATCAA 59.712 37.037 8.04 0.62 41.93 2.57
515 516 7.627300 GCAAAAGAAAAACACCCTAATTGCAAA 60.627 33.333 1.71 0.00 39.25 3.68
518 519 8.518430 AAGAAAAACACCCTAATTGCAAAAAT 57.482 26.923 1.71 0.00 0.00 1.82
608 609 4.432741 GGTCCTTGCCCTGGAGCC 62.433 72.222 0.00 0.00 43.90 4.70
609 610 3.334054 GTCCTTGCCCTGGAGCCT 61.334 66.667 0.00 0.00 33.78 4.58
612 613 1.690633 CCTTGCCCTGGAGCCTAGA 60.691 63.158 0.00 0.00 0.00 2.43
613 614 1.524482 CTTGCCCTGGAGCCTAGAC 59.476 63.158 0.00 0.00 0.00 2.59
614 615 0.980231 CTTGCCCTGGAGCCTAGACT 60.980 60.000 0.00 0.00 0.00 3.24
615 616 0.978146 TTGCCCTGGAGCCTAGACTC 60.978 60.000 0.00 0.00 35.86 3.36
616 617 1.381872 GCCCTGGAGCCTAGACTCA 60.382 63.158 8.43 0.00 38.50 3.41
617 618 0.978146 GCCCTGGAGCCTAGACTCAA 60.978 60.000 8.43 0.00 38.50 3.02
618 619 1.799933 CCCTGGAGCCTAGACTCAAT 58.200 55.000 8.43 0.00 38.50 2.57
619 620 1.415659 CCCTGGAGCCTAGACTCAATG 59.584 57.143 8.43 0.00 38.50 2.82
621 622 2.768527 CCTGGAGCCTAGACTCAATGAA 59.231 50.000 8.43 0.00 38.50 2.57
623 624 4.323792 CCTGGAGCCTAGACTCAATGAAAA 60.324 45.833 8.43 0.00 38.50 2.29
624 625 5.241403 TGGAGCCTAGACTCAATGAAAAA 57.759 39.130 8.43 0.00 38.50 1.94
695 696 9.716531 TTCATAGGATTTGAGATACATGTCATC 57.283 33.333 0.00 4.47 29.66 2.92
696 697 9.097946 TCATAGGATTTGAGATACATGTCATCT 57.902 33.333 0.00 9.42 35.43 2.90
697 698 9.368674 CATAGGATTTGAGATACATGTCATCTC 57.631 37.037 24.04 24.04 45.76 2.75
707 708 8.703378 AGATACATGTCATCTCATCTTCTACA 57.297 34.615 0.00 0.00 0.00 2.74
708 709 9.140874 AGATACATGTCATCTCATCTTCTACAA 57.859 33.333 0.00 0.00 0.00 2.41
709 710 9.755804 GATACATGTCATCTCATCTTCTACAAA 57.244 33.333 0.00 0.00 0.00 2.83
712 713 9.458727 ACATGTCATCTCATCTTCTACAAAATT 57.541 29.630 0.00 0.00 0.00 1.82
713 714 9.932699 CATGTCATCTCATCTTCTACAAAATTC 57.067 33.333 0.00 0.00 0.00 2.17
714 715 8.498054 TGTCATCTCATCTTCTACAAAATTCC 57.502 34.615 0.00 0.00 0.00 3.01
715 716 8.324306 TGTCATCTCATCTTCTACAAAATTCCT 58.676 33.333 0.00 0.00 0.00 3.36
716 717 9.823647 GTCATCTCATCTTCTACAAAATTCCTA 57.176 33.333 0.00 0.00 0.00 2.94
721 722 9.844257 CTCATCTTCTACAAAATTCCTATTCCT 57.156 33.333 0.00 0.00 0.00 3.36
724 725 9.765795 ATCTTCTACAAAATTCCTATTCCTACG 57.234 33.333 0.00 0.00 0.00 3.51
725 726 8.974238 TCTTCTACAAAATTCCTATTCCTACGA 58.026 33.333 0.00 0.00 0.00 3.43
726 727 9.765795 CTTCTACAAAATTCCTATTCCTACGAT 57.234 33.333 0.00 0.00 0.00 3.73
736 737 9.892130 ATTCCTATTCCTACGATAATTTCATCC 57.108 33.333 0.00 0.00 0.00 3.51
738 739 9.763837 TCCTATTCCTACGATAATTTCATCCTA 57.236 33.333 0.00 0.00 0.00 2.94
760 1169 4.657814 TGAATCAAAAAGACCCTAGGCT 57.342 40.909 2.05 0.00 0.00 4.58
762 1171 2.762535 TCAAAAAGACCCTAGGCTCG 57.237 50.000 2.05 0.00 0.00 5.03
780 1189 1.153349 GGGAGACGACAGGGATTGC 60.153 63.158 0.00 0.00 0.00 3.56
795 1208 3.936772 TTGCTTGGCCCATCCGTCC 62.937 63.158 0.00 0.00 37.80 4.79
810 1223 2.635915 TCCGTCCTCGCCCATAATAAAT 59.364 45.455 0.00 0.00 35.54 1.40
821 1234 7.488322 TCGCCCATAATAAATGAAAGGAAAAG 58.512 34.615 0.00 0.00 0.00 2.27
827 1240 9.807649 CATAATAAATGAAAGGAAAAGACCCAG 57.192 33.333 0.00 0.00 0.00 4.45
828 1241 4.607293 AAATGAAAGGAAAAGACCCAGC 57.393 40.909 0.00 0.00 0.00 4.85
829 1242 1.995376 TGAAAGGAAAAGACCCAGCC 58.005 50.000 0.00 0.00 0.00 4.85
933 1364 0.104672 ACCATCCCATATCCGACCCA 60.105 55.000 0.00 0.00 0.00 4.51
934 1365 1.289160 CCATCCCATATCCGACCCAT 58.711 55.000 0.00 0.00 0.00 4.00
935 1366 1.210478 CCATCCCATATCCGACCCATC 59.790 57.143 0.00 0.00 0.00 3.51
938 1369 0.547712 CCCATATCCGACCCATCCCT 60.548 60.000 0.00 0.00 0.00 4.20
940 1371 1.003580 CCATATCCGACCCATCCCTTG 59.996 57.143 0.00 0.00 0.00 3.61
1031 1462 2.768834 GGAAGCTCGAGCCGAAATT 58.231 52.632 32.94 20.45 43.38 1.82
1290 1721 1.893801 GAGGTCGAGGAGGAAGAACAA 59.106 52.381 0.00 0.00 0.00 2.83
1674 2105 1.519719 CACTACCTCCTGCCAGCTC 59.480 63.158 0.00 0.00 0.00 4.09
2302 2733 4.695606 AGTTGGTCCTAATAGTTCAGGGA 58.304 43.478 0.00 0.00 32.40 4.20
2460 2891 6.657541 GTCATTAGGTAAGATTTGGTTGGTCA 59.342 38.462 0.00 0.00 0.00 4.02
2585 3016 5.983118 AGCTTTGCATTTACAGTTTTACACC 59.017 36.000 0.00 0.00 0.00 4.16
2723 3156 4.652881 TGTGCATTCTGATGAGATCTAGGT 59.347 41.667 0.00 0.00 35.16 3.08
2815 3248 7.751768 ATGAAGTTAATGCCTTCTATTAGCC 57.248 36.000 6.04 0.00 39.24 3.93
2896 3329 7.175119 GCTTCTTAGTTTTAGTGATGGTCCTTT 59.825 37.037 0.00 0.00 0.00 3.11
2919 3352 8.518151 TTTCACATGTATTACATTTGTTGCAG 57.482 30.769 17.97 4.57 36.53 4.41
3019 3454 2.413837 GCTAGAGCGAAGGTGTTGAAA 58.586 47.619 0.00 0.00 39.88 2.69
3020 3455 2.806244 GCTAGAGCGAAGGTGTTGAAAA 59.194 45.455 0.00 0.00 39.88 2.29
3082 3517 6.744112 TGTTTTGTTTGCCTTATTCGATCTT 58.256 32.000 0.00 0.00 0.00 2.40
3093 3529 5.979517 CCTTATTCGATCTTTGAAATTGGCC 59.020 40.000 0.00 0.00 0.00 5.36
3102 3538 7.412237 CGATCTTTGAAATTGGCCAAAAGATTC 60.412 37.037 29.82 25.29 32.63 2.52
3145 3582 3.089284 CCTTGGTAGGTTTGAATGGGTC 58.911 50.000 0.00 0.00 36.74 4.46
3162 3599 2.036346 GGGTCTCAGTTTGCAAGCAAAT 59.964 45.455 21.43 9.39 45.90 2.32
3266 3703 5.048782 TGCAGGTTTCAGTGCTTACATAAAG 60.049 40.000 0.00 0.00 40.54 1.85
3295 3739 7.902087 TGCTTATTTTAATTACTGCAAACCCT 58.098 30.769 0.00 0.00 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 4.796231 AGACATCGTCGCCGCCAC 62.796 66.667 0.00 0.00 37.67 5.01
10 11 4.492160 GAGACATCGTCGCCGCCA 62.492 66.667 0.00 0.00 37.67 5.69
11 12 4.194720 AGAGACATCGTCGCCGCC 62.195 66.667 0.00 0.00 37.67 6.13
12 13 2.652496 GAGAGACATCGTCGCCGC 60.652 66.667 0.00 0.00 37.67 6.53
13 14 1.297967 CTGAGAGACATCGTCGCCG 60.298 63.158 0.00 0.00 37.67 6.46
14 15 1.003331 CTACTGAGAGACATCGTCGCC 60.003 57.143 0.00 0.00 37.67 5.54
15 16 1.934525 TCTACTGAGAGACATCGTCGC 59.065 52.381 0.00 0.00 37.67 5.19
26 27 9.290988 GGAGACATTATTCATACTCTACTGAGA 57.709 37.037 0.00 0.00 42.73 3.27
27 28 8.519526 GGGAGACATTATTCATACTCTACTGAG 58.480 40.741 0.00 0.00 45.43 3.35
28 29 8.004801 TGGGAGACATTATTCATACTCTACTGA 58.995 37.037 0.00 0.00 0.00 3.41
29 30 8.183104 TGGGAGACATTATTCATACTCTACTG 57.817 38.462 0.00 0.00 0.00 2.74
30 31 8.811017 CATGGGAGACATTATTCATACTCTACT 58.189 37.037 0.00 0.00 37.84 2.57
31 32 8.589338 ACATGGGAGACATTATTCATACTCTAC 58.411 37.037 0.00 0.00 37.84 2.59
32 33 8.727100 ACATGGGAGACATTATTCATACTCTA 57.273 34.615 0.00 0.00 37.84 2.43
33 34 7.256475 GGACATGGGAGACATTATTCATACTCT 60.256 40.741 0.00 0.00 37.84 3.24
34 35 6.876257 GGACATGGGAGACATTATTCATACTC 59.124 42.308 0.00 0.00 37.84 2.59
35 36 6.519043 CGGACATGGGAGACATTATTCATACT 60.519 42.308 0.00 0.00 37.84 2.12
36 37 5.639506 CGGACATGGGAGACATTATTCATAC 59.360 44.000 0.00 0.00 37.84 2.39
37 38 5.542251 TCGGACATGGGAGACATTATTCATA 59.458 40.000 0.00 0.00 37.84 2.15
38 39 4.347876 TCGGACATGGGAGACATTATTCAT 59.652 41.667 0.00 0.00 37.84 2.57
39 40 3.709141 TCGGACATGGGAGACATTATTCA 59.291 43.478 0.00 0.00 37.84 2.57
40 41 4.336889 TCGGACATGGGAGACATTATTC 57.663 45.455 0.00 0.00 37.84 1.75
41 42 4.263068 GGATCGGACATGGGAGACATTATT 60.263 45.833 0.00 0.00 37.84 1.40
42 43 3.261897 GGATCGGACATGGGAGACATTAT 59.738 47.826 0.00 0.00 37.84 1.28
43 44 2.632996 GGATCGGACATGGGAGACATTA 59.367 50.000 0.00 0.00 37.84 1.90
44 45 1.417890 GGATCGGACATGGGAGACATT 59.582 52.381 0.00 0.00 37.84 2.71
45 46 1.051812 GGATCGGACATGGGAGACAT 58.948 55.000 0.00 0.00 41.57 3.06
46 47 0.032117 AGGATCGGACATGGGAGACA 60.032 55.000 0.00 0.00 0.00 3.41
47 48 1.123928 AAGGATCGGACATGGGAGAC 58.876 55.000 0.00 0.00 0.00 3.36
48 49 2.767644 TAAGGATCGGACATGGGAGA 57.232 50.000 0.00 0.00 0.00 3.71
49 50 4.319177 GAAATAAGGATCGGACATGGGAG 58.681 47.826 0.00 0.00 0.00 4.30
50 51 3.244078 CGAAATAAGGATCGGACATGGGA 60.244 47.826 0.00 0.00 35.49 4.37
51 52 3.067106 CGAAATAAGGATCGGACATGGG 58.933 50.000 0.00 0.00 35.49 4.00
52 53 3.990092 TCGAAATAAGGATCGGACATGG 58.010 45.455 0.00 0.00 39.45 3.66
53 54 6.309009 CACTATCGAAATAAGGATCGGACATG 59.691 42.308 0.00 0.00 39.45 3.21
54 55 6.390721 CACTATCGAAATAAGGATCGGACAT 58.609 40.000 0.00 0.00 39.45 3.06
55 56 5.769367 CACTATCGAAATAAGGATCGGACA 58.231 41.667 0.00 0.00 39.45 4.02
56 57 4.621886 GCACTATCGAAATAAGGATCGGAC 59.378 45.833 0.00 0.00 39.45 4.79
57 58 4.615223 CGCACTATCGAAATAAGGATCGGA 60.615 45.833 0.00 0.00 39.45 4.55
58 59 3.608506 CGCACTATCGAAATAAGGATCGG 59.391 47.826 0.00 0.00 39.45 4.18
59 60 4.227538 ACGCACTATCGAAATAAGGATCG 58.772 43.478 0.00 0.00 40.31 3.69
60 61 5.462405 AGACGCACTATCGAAATAAGGATC 58.538 41.667 0.00 0.00 0.00 3.36
61 62 5.455056 AGACGCACTATCGAAATAAGGAT 57.545 39.130 0.00 0.00 0.00 3.24
62 63 4.913335 AGACGCACTATCGAAATAAGGA 57.087 40.909 0.00 0.00 0.00 3.36
63 64 4.617645 GCTAGACGCACTATCGAAATAAGG 59.382 45.833 0.00 0.00 38.92 2.69
64 65 5.212934 TGCTAGACGCACTATCGAAATAAG 58.787 41.667 0.00 0.00 45.47 1.73
65 66 5.177725 TGCTAGACGCACTATCGAAATAA 57.822 39.130 0.00 0.00 45.47 1.40
66 67 4.823790 TGCTAGACGCACTATCGAAATA 57.176 40.909 0.00 0.00 45.47 1.40
67 68 3.710326 TGCTAGACGCACTATCGAAAT 57.290 42.857 0.00 0.00 45.47 2.17
77 78 5.558539 GTCTTCTGACGATGCTAGACGCA 62.559 52.174 0.00 0.00 42.46 5.24
78 79 1.064208 TCTTCTGACGATGCTAGACGC 59.936 52.381 0.00 0.00 39.77 5.19
79 80 2.710760 GTCTTCTGACGATGCTAGACG 58.289 52.381 0.00 0.00 33.15 4.18
90 91 0.674534 ACCTCCACACGTCTTCTGAC 59.325 55.000 0.00 0.00 39.70 3.51
91 92 0.673985 CACCTCCACACGTCTTCTGA 59.326 55.000 0.00 0.00 0.00 3.27
92 93 0.389391 ACACCTCCACACGTCTTCTG 59.611 55.000 0.00 0.00 0.00 3.02
93 94 0.389391 CACACCTCCACACGTCTTCT 59.611 55.000 0.00 0.00 0.00 2.85
94 95 0.104304 ACACACCTCCACACGTCTTC 59.896 55.000 0.00 0.00 0.00 2.87
95 96 0.104304 GACACACCTCCACACGTCTT 59.896 55.000 0.00 0.00 0.00 3.01
96 97 0.755698 AGACACACCTCCACACGTCT 60.756 55.000 0.00 0.00 0.00 4.18
97 98 0.318784 GAGACACACCTCCACACGTC 60.319 60.000 0.00 0.00 0.00 4.34
98 99 1.740285 GAGACACACCTCCACACGT 59.260 57.895 0.00 0.00 0.00 4.49
99 100 4.655527 GAGACACACCTCCACACG 57.344 61.111 0.00 0.00 0.00 4.49
105 106 1.313812 ATCCGACGGAGACACACCTC 61.314 60.000 22.99 0.00 34.05 3.85
106 107 0.034767 TATCCGACGGAGACACACCT 60.035 55.000 22.99 5.14 34.05 4.00
107 108 0.381089 CTATCCGACGGAGACACACC 59.619 60.000 22.99 0.00 34.05 4.16
108 109 0.248539 GCTATCCGACGGAGACACAC 60.249 60.000 22.99 4.67 34.05 3.82
109 110 0.678684 TGCTATCCGACGGAGACACA 60.679 55.000 22.99 13.46 34.05 3.72
110 111 0.248539 GTGCTATCCGACGGAGACAC 60.249 60.000 22.99 22.94 34.05 3.67
111 112 0.678684 TGTGCTATCCGACGGAGACA 60.679 55.000 22.99 17.55 34.05 3.41
112 113 0.454600 TTGTGCTATCCGACGGAGAC 59.545 55.000 22.99 15.32 34.05 3.36
113 114 0.738975 CTTGTGCTATCCGACGGAGA 59.261 55.000 22.99 17.30 34.05 3.71
114 115 0.738975 TCTTGTGCTATCCGACGGAG 59.261 55.000 22.99 10.76 34.05 4.63
115 116 1.337071 GATCTTGTGCTATCCGACGGA 59.663 52.381 20.85 20.85 35.55 4.69
116 117 1.603172 GGATCTTGTGCTATCCGACGG 60.603 57.143 7.84 7.84 32.79 4.79
117 118 1.067060 TGGATCTTGTGCTATCCGACG 59.933 52.381 0.00 0.00 43.96 5.12
118 119 2.890808 TGGATCTTGTGCTATCCGAC 57.109 50.000 0.00 0.00 43.96 4.79
119 120 3.552890 CGATTGGATCTTGTGCTATCCGA 60.553 47.826 0.00 0.00 43.96 4.55
120 121 2.733552 CGATTGGATCTTGTGCTATCCG 59.266 50.000 0.00 0.00 43.96 4.18
121 122 3.070018 CCGATTGGATCTTGTGCTATCC 58.930 50.000 0.00 0.00 41.81 2.59
122 123 3.496130 CACCGATTGGATCTTGTGCTATC 59.504 47.826 5.81 0.00 39.21 2.08
123 124 3.118261 ACACCGATTGGATCTTGTGCTAT 60.118 43.478 5.81 0.00 39.21 2.97
124 125 2.236146 ACACCGATTGGATCTTGTGCTA 59.764 45.455 5.81 0.00 39.21 3.49
125 126 1.003580 ACACCGATTGGATCTTGTGCT 59.996 47.619 5.81 0.00 39.21 4.40
126 127 1.398390 GACACCGATTGGATCTTGTGC 59.602 52.381 5.81 0.00 39.21 4.57
127 128 1.660607 CGACACCGATTGGATCTTGTG 59.339 52.381 5.81 0.00 39.21 3.33
128 129 1.405526 CCGACACCGATTGGATCTTGT 60.406 52.381 5.81 0.00 39.21 3.16
129 130 1.290203 CCGACACCGATTGGATCTTG 58.710 55.000 5.81 0.00 39.21 3.02
130 131 0.902531 ACCGACACCGATTGGATCTT 59.097 50.000 5.81 0.00 39.21 2.40
131 132 0.460311 GACCGACACCGATTGGATCT 59.540 55.000 5.81 0.00 39.21 2.75
132 133 0.460311 AGACCGACACCGATTGGATC 59.540 55.000 5.81 1.92 39.21 3.36
133 134 0.902531 AAGACCGACACCGATTGGAT 59.097 50.000 5.81 0.00 39.21 3.41
134 135 0.245539 GAAGACCGACACCGATTGGA 59.754 55.000 5.81 0.00 39.21 3.53
135 136 1.076533 CGAAGACCGACACCGATTGG 61.077 60.000 0.00 0.00 41.76 3.16
136 137 1.076533 CCGAAGACCGACACCGATTG 61.077 60.000 0.00 0.00 41.76 2.67
137 138 1.214589 CCGAAGACCGACACCGATT 59.785 57.895 0.00 0.00 41.76 3.34
138 139 1.975407 ACCGAAGACCGACACCGAT 60.975 57.895 0.00 0.00 41.76 4.18
139 140 2.595463 ACCGAAGACCGACACCGA 60.595 61.111 0.00 0.00 41.76 4.69
140 141 2.430244 CACCGAAGACCGACACCG 60.430 66.667 0.00 0.00 41.76 4.94
141 142 1.885163 ATCCACCGAAGACCGACACC 61.885 60.000 0.00 0.00 41.76 4.16
142 143 0.037605 AATCCACCGAAGACCGACAC 60.038 55.000 0.00 0.00 41.76 3.67
143 144 0.682852 AAATCCACCGAAGACCGACA 59.317 50.000 0.00 0.00 41.76 4.35
144 145 1.076332 CAAATCCACCGAAGACCGAC 58.924 55.000 0.00 0.00 41.76 4.79
145 146 0.682852 ACAAATCCACCGAAGACCGA 59.317 50.000 0.00 0.00 41.76 4.69
146 147 1.076332 GACAAATCCACCGAAGACCG 58.924 55.000 0.00 0.00 38.18 4.79
147 148 2.076863 CAGACAAATCCACCGAAGACC 58.923 52.381 0.00 0.00 0.00 3.85
148 149 2.076863 CCAGACAAATCCACCGAAGAC 58.923 52.381 0.00 0.00 0.00 3.01
149 150 1.974957 TCCAGACAAATCCACCGAAGA 59.025 47.619 0.00 0.00 0.00 2.87
150 151 2.472695 TCCAGACAAATCCACCGAAG 57.527 50.000 0.00 0.00 0.00 3.79
151 152 2.571653 AGATCCAGACAAATCCACCGAA 59.428 45.455 0.00 0.00 0.00 4.30
152 153 2.187958 AGATCCAGACAAATCCACCGA 58.812 47.619 0.00 0.00 0.00 4.69
153 154 2.698855 AGATCCAGACAAATCCACCG 57.301 50.000 0.00 0.00 0.00 4.94
154 155 4.762289 ACTAGATCCAGACAAATCCACC 57.238 45.455 0.00 0.00 0.00 4.61
155 156 6.642950 CGAATACTAGATCCAGACAAATCCAC 59.357 42.308 0.00 0.00 0.00 4.02
156 157 6.549736 TCGAATACTAGATCCAGACAAATCCA 59.450 38.462 0.00 0.00 0.00 3.41
157 158 6.982852 TCGAATACTAGATCCAGACAAATCC 58.017 40.000 0.00 0.00 0.00 3.01
158 159 7.483375 CGATCGAATACTAGATCCAGACAAATC 59.517 40.741 10.26 0.00 39.91 2.17
159 160 7.040340 ACGATCGAATACTAGATCCAGACAAAT 60.040 37.037 24.34 0.00 39.91 2.32
160 161 6.262496 ACGATCGAATACTAGATCCAGACAAA 59.738 38.462 24.34 0.00 39.91 2.83
161 162 5.763698 ACGATCGAATACTAGATCCAGACAA 59.236 40.000 24.34 0.00 39.91 3.18
162 163 5.179555 CACGATCGAATACTAGATCCAGACA 59.820 44.000 24.34 0.00 39.91 3.41
163 164 5.179742 ACACGATCGAATACTAGATCCAGAC 59.820 44.000 24.34 0.00 39.91 3.51
164 165 5.179555 CACACGATCGAATACTAGATCCAGA 59.820 44.000 24.34 0.00 39.91 3.86
165 166 5.386447 CACACGATCGAATACTAGATCCAG 58.614 45.833 24.34 0.00 39.91 3.86
166 167 4.215613 CCACACGATCGAATACTAGATCCA 59.784 45.833 24.34 0.00 39.91 3.41
167 168 4.215827 ACCACACGATCGAATACTAGATCC 59.784 45.833 24.34 0.00 39.91 3.36
168 169 5.359716 ACCACACGATCGAATACTAGATC 57.640 43.478 24.34 0.00 39.72 2.75
169 170 5.769484 AACCACACGATCGAATACTAGAT 57.231 39.130 24.34 0.00 0.00 1.98
170 171 5.585844 TGTAACCACACGATCGAATACTAGA 59.414 40.000 24.34 1.69 0.00 2.43
171 172 5.813717 TGTAACCACACGATCGAATACTAG 58.186 41.667 24.34 5.94 0.00 2.57
172 173 5.816449 TGTAACCACACGATCGAATACTA 57.184 39.130 24.34 2.94 0.00 1.82
173 174 4.707030 TGTAACCACACGATCGAATACT 57.293 40.909 24.34 3.94 0.00 2.12
174 175 4.860907 ACTTGTAACCACACGATCGAATAC 59.139 41.667 24.34 14.09 33.30 1.89
175 176 5.063180 ACTTGTAACCACACGATCGAATA 57.937 39.130 24.34 2.41 33.30 1.75
176 177 3.921677 ACTTGTAACCACACGATCGAAT 58.078 40.909 24.34 6.04 33.30 3.34
177 178 3.374220 ACTTGTAACCACACGATCGAA 57.626 42.857 24.34 0.65 33.30 3.71
178 179 3.374220 AACTTGTAACCACACGATCGA 57.626 42.857 24.34 0.00 33.30 3.59
179 180 3.491639 TCAAACTTGTAACCACACGATCG 59.508 43.478 14.88 14.88 33.30 3.69
180 181 5.390567 GGATCAAACTTGTAACCACACGATC 60.391 44.000 0.00 0.00 33.30 3.69
181 182 4.454504 GGATCAAACTTGTAACCACACGAT 59.545 41.667 0.00 0.00 33.30 3.73
182 183 3.810941 GGATCAAACTTGTAACCACACGA 59.189 43.478 0.00 0.00 33.30 4.35
183 184 3.813166 AGGATCAAACTTGTAACCACACG 59.187 43.478 0.00 0.00 33.30 4.49
184 185 5.767816 AAGGATCAAACTTGTAACCACAC 57.232 39.130 0.00 0.00 33.30 3.82
185 186 5.008217 CGAAAGGATCAAACTTGTAACCACA 59.992 40.000 0.00 0.00 0.00 4.17
186 187 5.237779 TCGAAAGGATCAAACTTGTAACCAC 59.762 40.000 0.00 0.00 0.00 4.16
187 188 5.369833 TCGAAAGGATCAAACTTGTAACCA 58.630 37.500 0.00 0.00 0.00 3.67
188 189 5.934935 TCGAAAGGATCAAACTTGTAACC 57.065 39.130 0.00 0.00 0.00 2.85
201 202 5.247337 GGAAGGGAGAATAGATCGAAAGGAT 59.753 44.000 0.00 0.00 38.35 3.24
202 203 4.589374 GGAAGGGAGAATAGATCGAAAGGA 59.411 45.833 0.00 0.00 0.00 3.36
203 204 4.559704 CGGAAGGGAGAATAGATCGAAAGG 60.560 50.000 0.00 0.00 0.00 3.11
204 205 4.278669 TCGGAAGGGAGAATAGATCGAAAG 59.721 45.833 0.00 0.00 0.00 2.62
205 206 4.212716 TCGGAAGGGAGAATAGATCGAAA 58.787 43.478 0.00 0.00 0.00 3.46
206 207 3.828921 TCGGAAGGGAGAATAGATCGAA 58.171 45.455 0.00 0.00 0.00 3.71
207 208 3.503800 TCGGAAGGGAGAATAGATCGA 57.496 47.619 0.00 0.00 0.00 3.59
208 209 4.013728 AGATCGGAAGGGAGAATAGATCG 58.986 47.826 0.00 0.00 38.32 3.69
209 210 7.559897 AGAATAGATCGGAAGGGAGAATAGATC 59.440 40.741 0.00 0.00 34.81 2.75
210 211 7.418378 AGAATAGATCGGAAGGGAGAATAGAT 58.582 38.462 0.00 0.00 0.00 1.98
211 212 6.795590 AGAATAGATCGGAAGGGAGAATAGA 58.204 40.000 0.00 0.00 0.00 1.98
212 213 6.889722 AGAGAATAGATCGGAAGGGAGAATAG 59.110 42.308 0.00 0.00 0.00 1.73
213 214 6.795590 AGAGAATAGATCGGAAGGGAGAATA 58.204 40.000 0.00 0.00 0.00 1.75
214 215 5.650283 AGAGAATAGATCGGAAGGGAGAAT 58.350 41.667 0.00 0.00 0.00 2.40
215 216 5.068215 AGAGAATAGATCGGAAGGGAGAA 57.932 43.478 0.00 0.00 0.00 2.87
216 217 4.733077 AGAGAATAGATCGGAAGGGAGA 57.267 45.455 0.00 0.00 0.00 3.71
217 218 5.303078 TGAAAGAGAATAGATCGGAAGGGAG 59.697 44.000 0.00 0.00 0.00 4.30
218 219 5.208890 TGAAAGAGAATAGATCGGAAGGGA 58.791 41.667 0.00 0.00 0.00 4.20
219 220 5.537300 TGAAAGAGAATAGATCGGAAGGG 57.463 43.478 0.00 0.00 0.00 3.95
220 221 6.426328 CCAATGAAAGAGAATAGATCGGAAGG 59.574 42.308 0.00 0.00 0.00 3.46
221 222 6.989169 ACCAATGAAAGAGAATAGATCGGAAG 59.011 38.462 0.00 0.00 0.00 3.46
222 223 6.763135 CACCAATGAAAGAGAATAGATCGGAA 59.237 38.462 0.00 0.00 0.00 4.30
223 224 6.098266 TCACCAATGAAAGAGAATAGATCGGA 59.902 38.462 0.00 0.00 0.00 4.55
224 225 6.283694 TCACCAATGAAAGAGAATAGATCGG 58.716 40.000 0.00 0.00 0.00 4.18
225 226 7.095313 CCATCACCAATGAAAGAGAATAGATCG 60.095 40.741 0.00 0.00 38.69 3.69
226 227 7.718753 ACCATCACCAATGAAAGAGAATAGATC 59.281 37.037 0.00 0.00 38.69 2.75
227 228 7.580910 ACCATCACCAATGAAAGAGAATAGAT 58.419 34.615 0.00 0.00 38.69 1.98
228 229 6.962182 ACCATCACCAATGAAAGAGAATAGA 58.038 36.000 0.00 0.00 38.69 1.98
229 230 7.121759 ACAACCATCACCAATGAAAGAGAATAG 59.878 37.037 0.00 0.00 38.69 1.73
230 231 6.947733 ACAACCATCACCAATGAAAGAGAATA 59.052 34.615 0.00 0.00 38.69 1.75
231 232 5.776716 ACAACCATCACCAATGAAAGAGAAT 59.223 36.000 0.00 0.00 38.69 2.40
232 233 5.139727 ACAACCATCACCAATGAAAGAGAA 58.860 37.500 0.00 0.00 38.69 2.87
233 234 4.728772 ACAACCATCACCAATGAAAGAGA 58.271 39.130 0.00 0.00 38.69 3.10
234 235 5.224888 CAACAACCATCACCAATGAAAGAG 58.775 41.667 0.00 0.00 38.69 2.85
235 236 4.501229 GCAACAACCATCACCAATGAAAGA 60.501 41.667 0.00 0.00 38.69 2.52
236 237 3.742369 GCAACAACCATCACCAATGAAAG 59.258 43.478 0.00 0.00 38.69 2.62
237 238 3.387374 AGCAACAACCATCACCAATGAAA 59.613 39.130 0.00 0.00 38.69 2.69
238 239 2.964464 AGCAACAACCATCACCAATGAA 59.036 40.909 0.00 0.00 38.69 2.57
239 240 2.557924 GAGCAACAACCATCACCAATGA 59.442 45.455 0.00 0.00 37.59 2.57
240 241 2.353011 GGAGCAACAACCATCACCAATG 60.353 50.000 0.00 0.00 34.93 2.82
241 242 1.895131 GGAGCAACAACCATCACCAAT 59.105 47.619 0.00 0.00 0.00 3.16
242 243 1.327303 GGAGCAACAACCATCACCAA 58.673 50.000 0.00 0.00 0.00 3.67
243 244 0.888736 CGGAGCAACAACCATCACCA 60.889 55.000 0.00 0.00 0.00 4.17
244 245 1.586154 CCGGAGCAACAACCATCACC 61.586 60.000 0.00 0.00 0.00 4.02
245 246 1.875963 CCGGAGCAACAACCATCAC 59.124 57.895 0.00 0.00 0.00 3.06
246 247 1.971167 GCCGGAGCAACAACCATCA 60.971 57.895 5.05 0.00 39.53 3.07
247 248 2.877691 GCCGGAGCAACAACCATC 59.122 61.111 5.05 0.00 39.53 3.51
258 259 3.314331 AGGACCAGTGTGCCGGAG 61.314 66.667 5.05 0.00 32.35 4.63
259 260 3.625897 CAGGACCAGTGTGCCGGA 61.626 66.667 5.05 0.00 32.35 5.14
260 261 3.941188 ACAGGACCAGTGTGCCGG 61.941 66.667 0.00 0.00 32.35 6.13
261 262 2.666190 CACAGGACCAGTGTGCCG 60.666 66.667 8.82 0.00 39.00 5.69
262 263 1.302033 CTCACAGGACCAGTGTGCC 60.302 63.158 15.88 0.00 44.22 5.01
263 264 1.302033 CCTCACAGGACCAGTGTGC 60.302 63.158 15.88 0.00 44.22 4.57
264 265 0.469917 AACCTCACAGGACCAGTGTG 59.530 55.000 15.88 13.37 45.65 3.82
265 266 0.469917 CAACCTCACAGGACCAGTGT 59.530 55.000 15.88 0.00 37.67 3.55
266 267 0.469917 ACAACCTCACAGGACCAGTG 59.530 55.000 10.68 10.68 37.67 3.66
267 268 0.759346 GACAACCTCACAGGACCAGT 59.241 55.000 0.00 0.00 37.67 4.00
268 269 0.758734 TGACAACCTCACAGGACCAG 59.241 55.000 0.00 0.00 37.67 4.00
269 270 2.923619 TGACAACCTCACAGGACCA 58.076 52.632 0.00 0.00 37.67 4.02
276 277 1.719780 GAATCGTCGTGACAACCTCAC 59.280 52.381 0.41 0.00 45.38 3.51
277 278 1.611977 AGAATCGTCGTGACAACCTCA 59.388 47.619 0.41 0.00 0.00 3.86
278 279 2.349297 AGAATCGTCGTGACAACCTC 57.651 50.000 0.41 0.00 0.00 3.85
279 280 2.609737 GGAAGAATCGTCGTGACAACCT 60.610 50.000 0.41 0.00 0.00 3.50
280 281 1.725164 GGAAGAATCGTCGTGACAACC 59.275 52.381 0.41 0.00 0.00 3.77
281 282 1.725164 GGGAAGAATCGTCGTGACAAC 59.275 52.381 0.41 0.00 0.00 3.32
282 283 1.616865 AGGGAAGAATCGTCGTGACAA 59.383 47.619 0.41 0.00 0.00 3.18
283 284 1.067846 CAGGGAAGAATCGTCGTGACA 60.068 52.381 0.41 0.00 0.00 3.58
284 285 1.201647 TCAGGGAAGAATCGTCGTGAC 59.798 52.381 0.00 0.00 0.00 3.67
285 286 1.201647 GTCAGGGAAGAATCGTCGTGA 59.798 52.381 0.00 0.00 0.00 4.35
286 287 1.202582 AGTCAGGGAAGAATCGTCGTG 59.797 52.381 0.00 0.00 0.00 4.35
287 288 1.546961 AGTCAGGGAAGAATCGTCGT 58.453 50.000 0.00 0.00 0.00 4.34
288 289 3.566322 AGATAGTCAGGGAAGAATCGTCG 59.434 47.826 0.00 0.00 0.00 5.12
289 290 5.766174 AGTAGATAGTCAGGGAAGAATCGTC 59.234 44.000 0.00 0.00 0.00 4.20
290 291 5.697067 AGTAGATAGTCAGGGAAGAATCGT 58.303 41.667 0.00 0.00 0.00 3.73
291 292 6.711194 TGTAGTAGATAGTCAGGGAAGAATCG 59.289 42.308 0.00 0.00 0.00 3.34
292 293 8.466617 TTGTAGTAGATAGTCAGGGAAGAATC 57.533 38.462 0.00 0.00 0.00 2.52
293 294 8.840200 TTTGTAGTAGATAGTCAGGGAAGAAT 57.160 34.615 0.00 0.00 0.00 2.40
294 295 8.660295 TTTTGTAGTAGATAGTCAGGGAAGAA 57.340 34.615 0.00 0.00 0.00 2.52
295 296 8.660295 TTTTTGTAGTAGATAGTCAGGGAAGA 57.340 34.615 0.00 0.00 0.00 2.87
296 297 7.982354 CCTTTTTGTAGTAGATAGTCAGGGAAG 59.018 40.741 0.00 0.00 0.00 3.46
297 298 7.456902 ACCTTTTTGTAGTAGATAGTCAGGGAA 59.543 37.037 0.00 0.00 0.00 3.97
298 299 6.958192 ACCTTTTTGTAGTAGATAGTCAGGGA 59.042 38.462 0.00 0.00 0.00 4.20
299 300 7.184067 ACCTTTTTGTAGTAGATAGTCAGGG 57.816 40.000 0.00 0.00 0.00 4.45
300 301 8.936864 CAAACCTTTTTGTAGTAGATAGTCAGG 58.063 37.037 0.00 0.00 37.85 3.86
301 302 8.443937 GCAAACCTTTTTGTAGTAGATAGTCAG 58.556 37.037 0.00 0.00 43.62 3.51
302 303 7.389607 GGCAAACCTTTTTGTAGTAGATAGTCA 59.610 37.037 0.00 0.00 43.62 3.41
303 304 7.148289 GGGCAAACCTTTTTGTAGTAGATAGTC 60.148 40.741 0.00 0.00 43.62 2.59
304 305 6.657966 GGGCAAACCTTTTTGTAGTAGATAGT 59.342 38.462 0.00 0.00 43.62 2.12
305 306 6.183360 CGGGCAAACCTTTTTGTAGTAGATAG 60.183 42.308 0.00 0.00 43.62 2.08
306 307 5.644636 CGGGCAAACCTTTTTGTAGTAGATA 59.355 40.000 0.00 0.00 43.62 1.98
307 308 4.457949 CGGGCAAACCTTTTTGTAGTAGAT 59.542 41.667 0.00 0.00 43.62 1.98
308 309 3.816523 CGGGCAAACCTTTTTGTAGTAGA 59.183 43.478 0.00 0.00 43.62 2.59
309 310 3.057806 CCGGGCAAACCTTTTTGTAGTAG 60.058 47.826 0.00 0.00 43.62 2.57
310 311 2.885894 CCGGGCAAACCTTTTTGTAGTA 59.114 45.455 0.00 0.00 43.62 1.82
311 312 1.684450 CCGGGCAAACCTTTTTGTAGT 59.316 47.619 0.00 0.00 43.62 2.73
312 313 1.604438 GCCGGGCAAACCTTTTTGTAG 60.604 52.381 15.62 0.00 43.62 2.74
313 314 0.389757 GCCGGGCAAACCTTTTTGTA 59.610 50.000 15.62 0.00 43.62 2.41
314 315 1.145156 GCCGGGCAAACCTTTTTGT 59.855 52.632 15.62 0.00 43.62 2.83
315 316 0.599991 GAGCCGGGCAAACCTTTTTG 60.600 55.000 23.09 0.00 44.42 2.44
316 317 1.745890 GAGCCGGGCAAACCTTTTT 59.254 52.632 23.09 0.00 36.97 1.94
317 318 2.207229 GGAGCCGGGCAAACCTTTT 61.207 57.895 23.09 0.00 36.97 2.27
318 319 2.600470 GGAGCCGGGCAAACCTTT 60.600 61.111 23.09 0.00 36.97 3.11
319 320 2.730129 ATTGGAGCCGGGCAAACCTT 62.730 55.000 23.09 10.18 36.97 3.50
320 321 3.224007 ATTGGAGCCGGGCAAACCT 62.224 57.895 23.09 0.00 36.97 3.50
321 322 2.679996 ATTGGAGCCGGGCAAACC 60.680 61.111 23.09 20.26 0.00 3.27
322 323 1.937546 CTCATTGGAGCCGGGCAAAC 61.938 60.000 23.09 11.13 33.67 2.93
323 324 1.678635 CTCATTGGAGCCGGGCAAA 60.679 57.895 23.09 12.79 33.67 3.68
324 325 2.045045 CTCATTGGAGCCGGGCAA 60.045 61.111 23.09 7.31 33.67 4.52
325 326 4.113815 CCTCATTGGAGCCGGGCA 62.114 66.667 23.09 0.00 39.96 5.36
326 327 4.883354 CCCTCATTGGAGCCGGGC 62.883 72.222 12.11 12.11 39.96 6.13
327 328 3.089874 TCCCTCATTGGAGCCGGG 61.090 66.667 2.18 0.00 39.96 5.73
328 329 2.507944 CTCCCTCATTGGAGCCGG 59.492 66.667 0.00 0.00 45.13 6.13
333 334 0.046242 ATCACCCCTCCCTCATTGGA 59.954 55.000 0.00 0.00 38.35 3.53
334 335 0.184451 CATCACCCCTCCCTCATTGG 59.816 60.000 0.00 0.00 0.00 3.16
335 336 1.133976 GTCATCACCCCTCCCTCATTG 60.134 57.143 0.00 0.00 0.00 2.82
336 337 1.216990 GTCATCACCCCTCCCTCATT 58.783 55.000 0.00 0.00 0.00 2.57
337 338 0.044702 TGTCATCACCCCTCCCTCAT 59.955 55.000 0.00 0.00 0.00 2.90
338 339 0.618680 CTGTCATCACCCCTCCCTCA 60.619 60.000 0.00 0.00 0.00 3.86
339 340 1.977293 GCTGTCATCACCCCTCCCTC 61.977 65.000 0.00 0.00 0.00 4.30
340 341 1.997874 GCTGTCATCACCCCTCCCT 60.998 63.158 0.00 0.00 0.00 4.20
341 342 1.852157 TTGCTGTCATCACCCCTCCC 61.852 60.000 0.00 0.00 0.00 4.30
342 343 0.678048 GTTGCTGTCATCACCCCTCC 60.678 60.000 0.00 0.00 0.00 4.30
343 344 1.021390 CGTTGCTGTCATCACCCCTC 61.021 60.000 0.00 0.00 0.00 4.30
344 345 1.003355 CGTTGCTGTCATCACCCCT 60.003 57.895 0.00 0.00 0.00 4.79
345 346 2.690778 GCGTTGCTGTCATCACCCC 61.691 63.158 0.00 0.00 0.00 4.95
346 347 2.870372 GCGTTGCTGTCATCACCC 59.130 61.111 0.00 0.00 0.00 4.61
347 348 2.476051 CGCGTTGCTGTCATCACC 59.524 61.111 0.00 0.00 0.00 4.02
348 349 2.202222 GCGCGTTGCTGTCATCAC 60.202 61.111 8.43 0.00 41.73 3.06
349 350 3.422303 GGCGCGTTGCTGTCATCA 61.422 61.111 8.43 0.00 45.43 3.07
350 351 2.568935 GAAGGCGCGTTGCTGTCATC 62.569 60.000 21.52 0.00 45.43 2.92
351 352 2.669569 AAGGCGCGTTGCTGTCAT 60.670 55.556 15.53 0.00 45.43 3.06
352 353 3.345808 GAAGGCGCGTTGCTGTCA 61.346 61.111 21.52 0.00 45.43 3.58
353 354 4.430423 CGAAGGCGCGTTGCTGTC 62.430 66.667 21.52 4.25 45.43 3.51
354 355 4.961511 TCGAAGGCGCGTTGCTGT 62.962 61.111 21.52 0.00 45.43 4.40
355 356 4.430423 GTCGAAGGCGCGTTGCTG 62.430 66.667 21.52 9.81 45.43 4.41
356 357 4.664677 AGTCGAAGGCGCGTTGCT 62.665 61.111 21.52 12.09 45.43 3.91
357 358 3.712881 AAGTCGAAGGCGCGTTGC 61.713 61.111 21.52 10.68 45.38 4.17
358 359 2.170985 CAAGTCGAAGGCGCGTTG 59.829 61.111 21.52 12.37 36.95 4.10
359 360 3.712881 GCAAGTCGAAGGCGCGTT 61.713 61.111 16.28 16.28 36.95 4.84
360 361 4.664677 AGCAAGTCGAAGGCGCGT 62.665 61.111 8.43 0.00 36.95 6.01
361 362 3.354499 GAAGCAAGTCGAAGGCGCG 62.354 63.158 0.00 0.00 36.95 6.86
362 363 2.233007 CTGAAGCAAGTCGAAGGCGC 62.233 60.000 0.00 0.00 36.95 6.53
363 364 0.946221 ACTGAAGCAAGTCGAAGGCG 60.946 55.000 0.00 0.00 36.95 5.52
364 365 0.514691 CACTGAAGCAAGTCGAAGGC 59.485 55.000 0.00 0.00 0.00 4.35
365 366 0.514691 GCACTGAAGCAAGTCGAAGG 59.485 55.000 0.00 0.00 0.00 3.46
366 367 1.506493 AGCACTGAAGCAAGTCGAAG 58.494 50.000 0.00 0.00 36.85 3.79
367 368 1.599071 CAAGCACTGAAGCAAGTCGAA 59.401 47.619 0.00 0.00 36.85 3.71
368 369 1.220529 CAAGCACTGAAGCAAGTCGA 58.779 50.000 0.00 0.00 36.85 4.20
369 370 0.940126 ACAAGCACTGAAGCAAGTCG 59.060 50.000 0.00 0.00 36.85 4.18
370 371 3.134458 ACTACAAGCACTGAAGCAAGTC 58.866 45.455 0.00 0.00 36.85 3.01
371 372 3.134458 GACTACAAGCACTGAAGCAAGT 58.866 45.455 0.00 0.00 36.85 3.16
372 373 2.156504 CGACTACAAGCACTGAAGCAAG 59.843 50.000 0.00 0.00 36.85 4.01
373 374 2.135139 CGACTACAAGCACTGAAGCAA 58.865 47.619 0.00 0.00 36.85 3.91
374 375 1.068588 ACGACTACAAGCACTGAAGCA 59.931 47.619 0.00 0.00 36.85 3.91
375 376 1.721926 GACGACTACAAGCACTGAAGC 59.278 52.381 0.00 0.00 0.00 3.86
376 377 1.979469 CGACGACTACAAGCACTGAAG 59.021 52.381 0.00 0.00 0.00 3.02
377 378 1.335810 ACGACGACTACAAGCACTGAA 59.664 47.619 0.00 0.00 0.00 3.02
378 379 0.949397 ACGACGACTACAAGCACTGA 59.051 50.000 0.00 0.00 0.00 3.41
379 380 1.767289 AACGACGACTACAAGCACTG 58.233 50.000 0.00 0.00 0.00 3.66
380 381 2.095364 CCTAACGACGACTACAAGCACT 60.095 50.000 0.00 0.00 0.00 4.40
381 382 2.248487 CCTAACGACGACTACAAGCAC 58.752 52.381 0.00 0.00 0.00 4.40
382 383 1.881973 ACCTAACGACGACTACAAGCA 59.118 47.619 0.00 0.00 0.00 3.91
383 384 2.248487 CACCTAACGACGACTACAAGC 58.752 52.381 0.00 0.00 0.00 4.01
384 385 2.227388 ACCACCTAACGACGACTACAAG 59.773 50.000 0.00 0.00 0.00 3.16
385 386 2.226437 GACCACCTAACGACGACTACAA 59.774 50.000 0.00 0.00 0.00 2.41
386 387 1.806542 GACCACCTAACGACGACTACA 59.193 52.381 0.00 0.00 0.00 2.74
387 388 1.131315 GGACCACCTAACGACGACTAC 59.869 57.143 0.00 0.00 0.00 2.73
388 389 1.271325 TGGACCACCTAACGACGACTA 60.271 52.381 0.00 0.00 37.04 2.59
389 390 0.538057 TGGACCACCTAACGACGACT 60.538 55.000 0.00 0.00 37.04 4.18
390 391 0.387750 GTGGACCACCTAACGACGAC 60.388 60.000 14.16 0.00 37.04 4.34
391 392 0.822944 TGTGGACCACCTAACGACGA 60.823 55.000 22.00 0.00 37.04 4.20
392 393 0.388134 CTGTGGACCACCTAACGACG 60.388 60.000 22.00 0.00 37.04 5.12
393 394 0.963962 TCTGTGGACCACCTAACGAC 59.036 55.000 22.00 0.00 37.04 4.34
394 395 0.963962 GTCTGTGGACCACCTAACGA 59.036 55.000 22.00 7.71 36.53 3.85
395 396 0.966920 AGTCTGTGGACCACCTAACG 59.033 55.000 22.00 5.53 43.05 3.18
396 397 2.550208 CCAAGTCTGTGGACCACCTAAC 60.550 54.545 22.00 15.87 43.05 2.34
397 398 1.697432 CCAAGTCTGTGGACCACCTAA 59.303 52.381 22.00 4.41 43.05 2.69
398 399 1.348064 CCAAGTCTGTGGACCACCTA 58.652 55.000 22.00 7.03 43.05 3.08
399 400 0.694444 ACCAAGTCTGTGGACCACCT 60.694 55.000 22.00 9.04 43.05 4.00
400 401 0.182775 AACCAAGTCTGTGGACCACC 59.817 55.000 22.00 6.71 43.05 4.61
401 402 1.308998 CAACCAAGTCTGTGGACCAC 58.691 55.000 18.28 18.28 43.05 4.16
402 403 0.916086 ACAACCAAGTCTGTGGACCA 59.084 50.000 0.00 0.00 43.05 4.02
403 404 1.134220 TCACAACCAAGTCTGTGGACC 60.134 52.381 0.00 0.00 42.62 4.46
404 405 2.325583 TCACAACCAAGTCTGTGGAC 57.674 50.000 0.00 0.00 42.62 4.02
405 406 3.576078 AATCACAACCAAGTCTGTGGA 57.424 42.857 0.00 0.00 42.62 4.02
406 407 4.654091 AAAATCACAACCAAGTCTGTGG 57.346 40.909 2.63 0.00 42.62 4.17
427 428 8.780249 GCAATACAAGGAACACTAGAAGTAAAA 58.220 33.333 0.00 0.00 0.00 1.52
428 429 8.154856 AGCAATACAAGGAACACTAGAAGTAAA 58.845 33.333 0.00 0.00 0.00 2.01
429 430 7.676947 AGCAATACAAGGAACACTAGAAGTAA 58.323 34.615 0.00 0.00 0.00 2.24
430 431 7.241042 AGCAATACAAGGAACACTAGAAGTA 57.759 36.000 0.00 0.00 0.00 2.24
431 432 6.115448 AGCAATACAAGGAACACTAGAAGT 57.885 37.500 0.00 0.00 0.00 3.01
432 433 7.981789 TCATAGCAATACAAGGAACACTAGAAG 59.018 37.037 0.00 0.00 0.00 2.85
433 434 7.764443 GTCATAGCAATACAAGGAACACTAGAA 59.236 37.037 0.00 0.00 0.00 2.10
434 435 7.124298 AGTCATAGCAATACAAGGAACACTAGA 59.876 37.037 0.00 0.00 0.00 2.43
435 436 7.223582 CAGTCATAGCAATACAAGGAACACTAG 59.776 40.741 0.00 0.00 0.00 2.57
436 437 7.041721 CAGTCATAGCAATACAAGGAACACTA 58.958 38.462 0.00 0.00 0.00 2.74
437 438 5.877012 CAGTCATAGCAATACAAGGAACACT 59.123 40.000 0.00 0.00 0.00 3.55
438 439 5.065218 CCAGTCATAGCAATACAAGGAACAC 59.935 44.000 0.00 0.00 0.00 3.32
439 440 5.185454 CCAGTCATAGCAATACAAGGAACA 58.815 41.667 0.00 0.00 0.00 3.18
440 441 5.186198 ACCAGTCATAGCAATACAAGGAAC 58.814 41.667 0.00 0.00 0.00 3.62
441 442 5.435686 ACCAGTCATAGCAATACAAGGAA 57.564 39.130 0.00 0.00 0.00 3.36
442 443 5.435686 AACCAGTCATAGCAATACAAGGA 57.564 39.130 0.00 0.00 0.00 3.36
443 444 6.992123 TCATAACCAGTCATAGCAATACAAGG 59.008 38.462 0.00 0.00 0.00 3.61
444 445 7.712639 AGTCATAACCAGTCATAGCAATACAAG 59.287 37.037 0.00 0.00 0.00 3.16
445 446 7.564793 AGTCATAACCAGTCATAGCAATACAA 58.435 34.615 0.00 0.00 0.00 2.41
446 447 7.124573 AGTCATAACCAGTCATAGCAATACA 57.875 36.000 0.00 0.00 0.00 2.29
447 448 8.577296 TCTAGTCATAACCAGTCATAGCAATAC 58.423 37.037 0.00 0.00 0.00 1.89
448 449 8.706322 TCTAGTCATAACCAGTCATAGCAATA 57.294 34.615 0.00 0.00 0.00 1.90
449 450 7.603180 TCTAGTCATAACCAGTCATAGCAAT 57.397 36.000 0.00 0.00 0.00 3.56
450 451 7.287696 TGATCTAGTCATAACCAGTCATAGCAA 59.712 37.037 0.00 0.00 0.00 3.91
451 452 6.777580 TGATCTAGTCATAACCAGTCATAGCA 59.222 38.462 0.00 0.00 0.00 3.49
452 453 7.220741 TGATCTAGTCATAACCAGTCATAGC 57.779 40.000 0.00 0.00 0.00 2.97
455 456 8.543774 ACTTTTGATCTAGTCATAACCAGTCAT 58.456 33.333 0.00 0.00 36.54 3.06
456 457 7.907389 ACTTTTGATCTAGTCATAACCAGTCA 58.093 34.615 0.00 0.00 36.54 3.41
457 458 8.779354 AACTTTTGATCTAGTCATAACCAGTC 57.221 34.615 0.00 0.00 36.54 3.51
458 459 9.220767 GAAACTTTTGATCTAGTCATAACCAGT 57.779 33.333 0.00 0.00 36.54 4.00
459 460 9.442047 AGAAACTTTTGATCTAGTCATAACCAG 57.558 33.333 0.00 0.00 36.54 4.00
460 461 9.793259 AAGAAACTTTTGATCTAGTCATAACCA 57.207 29.630 0.00 0.00 36.54 3.67
465 466 8.632679 TGCAAAAGAAACTTTTGATCTAGTCAT 58.367 29.630 28.96 0.00 40.73 3.06
466 467 7.995289 TGCAAAAGAAACTTTTGATCTAGTCA 58.005 30.769 28.96 17.61 40.73 3.41
467 468 8.856490 TTGCAAAAGAAACTTTTGATCTAGTC 57.144 30.769 28.96 15.93 40.73 2.59
468 469 9.651913 TTTTGCAAAAGAAACTTTTGATCTAGT 57.348 25.926 28.96 0.00 40.73 2.57
669 670 9.716531 GATGACATGTATCTCAAATCCTATGAA 57.283 33.333 0.00 0.00 0.00 2.57
670 671 9.097946 AGATGACATGTATCTCAAATCCTATGA 57.902 33.333 0.00 0.00 29.05 2.15
681 682 8.791675 TGTAGAAGATGAGATGACATGTATCTC 58.208 37.037 24.04 24.04 46.82 2.75
683 684 9.755804 TTTGTAGAAGATGAGATGACATGTATC 57.244 33.333 0.00 2.87 0.00 2.24
686 687 9.458727 AATTTTGTAGAAGATGAGATGACATGT 57.541 29.630 0.00 0.00 0.00 3.21
687 688 9.932699 GAATTTTGTAGAAGATGAGATGACATG 57.067 33.333 0.00 0.00 0.00 3.21
688 689 9.118300 GGAATTTTGTAGAAGATGAGATGACAT 57.882 33.333 0.00 0.00 0.00 3.06
689 690 8.324306 AGGAATTTTGTAGAAGATGAGATGACA 58.676 33.333 0.00 0.00 0.00 3.58
690 691 8.729805 AGGAATTTTGTAGAAGATGAGATGAC 57.270 34.615 0.00 0.00 0.00 3.06
694 695 9.838339 GGAATAGGAATTTTGTAGAAGATGAGA 57.162 33.333 0.00 0.00 0.00 3.27
695 696 9.844257 AGGAATAGGAATTTTGTAGAAGATGAG 57.156 33.333 0.00 0.00 0.00 2.90
698 699 9.765795 CGTAGGAATAGGAATTTTGTAGAAGAT 57.234 33.333 0.00 0.00 0.00 2.40
699 700 8.974238 TCGTAGGAATAGGAATTTTGTAGAAGA 58.026 33.333 0.00 0.00 0.00 2.87
700 701 9.765795 ATCGTAGGAATAGGAATTTTGTAGAAG 57.234 33.333 0.00 0.00 0.00 2.85
710 711 9.892130 GGATGAAATTATCGTAGGAATAGGAAT 57.108 33.333 0.00 0.00 0.00 3.01
712 713 8.666129 AGGATGAAATTATCGTAGGAATAGGA 57.334 34.615 0.00 0.00 0.00 2.94
731 732 6.973642 AGGGTCTTTTTGATTCATAGGATGA 58.026 36.000 0.00 0.00 37.55 2.92
734 735 6.634955 GCCTAGGGTCTTTTTGATTCATAGGA 60.635 42.308 11.72 0.00 37.39 2.94
736 737 6.360618 AGCCTAGGGTCTTTTTGATTCATAG 58.639 40.000 7.93 0.00 0.00 2.23
738 739 5.196695 GAGCCTAGGGTCTTTTTGATTCAT 58.803 41.667 29.80 0.00 39.31 2.57
739 740 4.589908 GAGCCTAGGGTCTTTTTGATTCA 58.410 43.478 29.80 0.00 39.31 2.57
740 741 3.623510 CGAGCCTAGGGTCTTTTTGATTC 59.376 47.826 32.43 8.84 40.14 2.52
741 742 3.610911 CGAGCCTAGGGTCTTTTTGATT 58.389 45.455 32.43 0.00 40.14 2.57
742 743 2.092914 CCGAGCCTAGGGTCTTTTTGAT 60.093 50.000 32.43 0.00 40.14 2.57
744 745 1.679032 CCCGAGCCTAGGGTCTTTTTG 60.679 57.143 32.43 19.34 43.89 2.44
745 746 0.618981 CCCGAGCCTAGGGTCTTTTT 59.381 55.000 32.43 0.00 43.89 1.94
747 748 4.051932 CCCGAGCCTAGGGTCTTT 57.948 61.111 32.43 0.00 43.89 2.52
753 754 2.192443 TCGTCTCCCGAGCCTAGG 59.808 66.667 3.67 3.67 41.60 3.02
760 1169 1.000019 AATCCCTGTCGTCTCCCGA 60.000 57.895 0.00 0.00 45.00 5.14
762 1171 1.153349 GCAATCCCTGTCGTCTCCC 60.153 63.158 0.00 0.00 0.00 4.30
780 1189 2.190578 GAGGACGGATGGGCCAAG 59.809 66.667 11.89 8.00 35.94 3.61
795 1208 6.633500 TTCCTTTCATTTATTATGGGCGAG 57.367 37.500 0.00 0.00 0.00 5.03
810 1223 1.480498 GGGCTGGGTCTTTTCCTTTCA 60.480 52.381 0.00 0.00 0.00 2.69
821 1234 4.943373 TTTTTGAGGGGCTGGGTC 57.057 55.556 0.00 0.00 0.00 4.46
892 1323 1.359459 GGTGACAAGGCGACGATTCC 61.359 60.000 0.00 0.00 0.00 3.01
940 1371 1.962822 GGGTTCGACGGTTTGGGAC 60.963 63.158 0.00 0.00 0.00 4.46
1031 1462 0.823356 GGAGTTTGCTGCCAAGGTGA 60.823 55.000 0.00 0.00 31.52 4.02
1674 2105 2.282462 ACAGGGCCCAAAGAAGCG 60.282 61.111 27.56 3.70 0.00 4.68
1911 2342 4.551702 AACAAACAGAGCAAAACCCTTT 57.448 36.364 0.00 0.00 0.00 3.11
2302 2733 3.094572 CAGAAGACCCTGAATTTGGCAT 58.905 45.455 0.00 0.00 36.29 4.40
2460 2891 5.746990 AGCTTCTACAGTTAGGACACATT 57.253 39.130 0.00 0.00 0.00 2.71
2549 2980 7.801315 TGTAAATGCAAAGCTAACTTCTTAACG 59.199 33.333 0.00 0.00 34.05 3.18
2552 2983 8.391075 ACTGTAAATGCAAAGCTAACTTCTTA 57.609 30.769 0.00 0.00 34.05 2.10
2896 3329 7.446001 TCTGCAACAAATGTAATACATGTGA 57.554 32.000 25.59 6.55 44.67 3.58
2986 3419 2.028930 CGCTCTAGCCCCAACCTATTAG 60.029 54.545 0.00 0.00 37.91 1.73
2997 3431 0.741221 CAACACCTTCGCTCTAGCCC 60.741 60.000 0.00 0.00 37.91 5.19
3020 3455 9.474313 TCATTAAACTAAAACAGAGCCCATATT 57.526 29.630 0.00 0.00 0.00 1.28
3082 3517 5.764192 CCTTGAATCTTTTGGCCAATTTCAA 59.236 36.000 27.14 27.14 0.00 2.69
3145 3582 7.588488 CCAAAAATTATTTGCTTGCAAACTGAG 59.412 33.333 20.87 7.68 0.00 3.35
3162 3599 6.558488 AATGATAAGGCCTGCCAAAAATTA 57.442 33.333 5.69 0.16 38.92 1.40
3239 3676 4.588899 TGTAAGCACTGAAACCTGCATAT 58.411 39.130 0.00 0.00 35.73 1.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.