Multiple sequence alignment - TraesCS3A01G179300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G179300 chr3A 100.000 6193 0 0 1 6193 207247036 207240844 0.000000e+00 11437.0
1 TraesCS3A01G179300 chr3A 87.469 798 71 19 1555 2342 233134719 233135497 0.000000e+00 893.0
2 TraesCS3A01G179300 chr3A 96.565 262 9 0 5932 6193 207224962 207224701 9.530000e-118 435.0
3 TraesCS3A01G179300 chr3A 90.175 285 12 9 1172 1441 207244760 207244477 2.120000e-94 357.0
4 TraesCS3A01G179300 chr3A 90.175 285 12 9 2277 2560 207245865 207245596 2.120000e-94 357.0
5 TraesCS3A01G179300 chr3A 95.522 67 3 0 1171 1237 233134179 233134245 2.360000e-19 108.0
6 TraesCS3A01G179300 chr3D 92.612 2680 106 30 3291 5931 169888172 169885546 0.000000e+00 3768.0
7 TraesCS3A01G179300 chr3D 91.426 1178 71 6 1 1173 169890074 169888922 0.000000e+00 1589.0
8 TraesCS3A01G179300 chr3D 96.336 737 19 5 2559 3294 169888930 169888201 0.000000e+00 1205.0
9 TraesCS3A01G179300 chr3D 87.917 720 66 11 1437 2154 499950048 499949348 0.000000e+00 828.0
10 TraesCS3A01G179300 chr3D 82.766 499 75 8 1 494 401901426 401900934 9.530000e-118 435.0
11 TraesCS3A01G179300 chr3D 93.130 262 17 1 5932 6193 236373842 236373582 3.500000e-102 383.0
12 TraesCS3A01G179300 chr3D 92.748 262 17 2 5932 6193 236380547 236380288 1.630000e-100 377.0
13 TraesCS3A01G179300 chr3D 78.107 507 93 11 1 494 313992792 313993293 7.800000e-79 305.0
14 TraesCS3A01G179300 chr3D 89.286 84 8 1 2480 2563 64077325 64077243 3.050000e-18 104.0
15 TraesCS3A01G179300 chr7D 83.633 1112 142 27 4123 5207 183321537 183320439 0.000000e+00 1009.0
16 TraesCS3A01G179300 chr7D 88.618 369 42 0 2564 2932 183322637 183322269 3.400000e-122 449.0
17 TraesCS3A01G179300 chr7D 90.000 200 14 5 968 1165 183322837 183322642 2.870000e-63 254.0
18 TraesCS3A01G179300 chr7D 85.714 98 14 0 3858 3955 112769190 112769093 3.050000e-18 104.0
19 TraesCS3A01G179300 chr7B 84.000 1075 134 26 4159 5207 152052730 152051668 0.000000e+00 998.0
20 TraesCS3A01G179300 chr7B 88.347 369 43 0 2564 2932 152053887 152053519 1.580000e-120 444.0
21 TraesCS3A01G179300 chr7B 92.366 262 19 1 5932 6193 236002292 236002032 7.580000e-99 372.0
22 TraesCS3A01G179300 chr7B 83.569 353 53 4 1803 2154 44603911 44603563 5.990000e-85 326.0
23 TraesCS3A01G179300 chr7B 78.484 488 90 10 6 480 562985077 562985562 7.800000e-79 305.0
24 TraesCS3A01G179300 chr7B 90.306 196 13 5 972 1165 152054083 152053892 1.030000e-62 252.0
25 TraesCS3A01G179300 chr7B 100.000 28 0 0 3297 3324 42787364 42787337 1.100000e-02 52.8
26 TraesCS3A01G179300 chr7B 94.118 34 2 0 3291 3324 747439958 747439991 1.100000e-02 52.8
27 TraesCS3A01G179300 chr7A 83.183 1112 148 26 4123 5207 188027321 188028420 0.000000e+00 981.0
28 TraesCS3A01G179300 chr7A 86.763 831 78 16 4303 5132 287638863 287638064 0.000000e+00 896.0
29 TraesCS3A01G179300 chr7A 88.962 453 39 4 1531 1982 729690883 729690441 3.260000e-152 549.0
30 TraesCS3A01G179300 chr7A 87.838 370 43 2 2564 2932 188026027 188026395 3.430000e-117 433.0
31 TraesCS3A01G179300 chr7A 80.080 497 89 6 6 494 246719313 246718819 1.640000e-95 361.0
32 TraesCS3A01G179300 chr7A 83.333 360 46 11 1803 2159 112773841 112773493 2.790000e-83 320.0
33 TraesCS3A01G179300 chr7A 91.327 196 11 5 972 1165 188025831 188026022 4.760000e-66 263.0
34 TraesCS3A01G179300 chr7A 87.417 151 12 7 2421 2566 578481630 578481778 3.840000e-37 167.0
35 TraesCS3A01G179300 chr7A 86.713 143 15 4 2421 2560 729688579 729688438 8.310000e-34 156.0
36 TraesCS3A01G179300 chr7A 96.970 33 1 0 3291 3323 66985255 66985287 8.670000e-04 56.5
37 TraesCS3A01G179300 chr1A 87.470 830 74 14 4303 5132 186718083 186717284 0.000000e+00 929.0
38 TraesCS3A01G179300 chr1A 78.468 483 88 6 1 478 41542236 41541765 1.010000e-77 302.0
39 TraesCS3A01G179300 chr1A 77.710 489 97 10 2 480 251946226 251946712 7.850000e-74 289.0
40 TraesCS3A01G179300 chr1A 74.459 462 100 10 29 476 461376847 461377304 3.810000e-42 183.0
41 TraesCS3A01G179300 chr1A 91.935 62 4 1 2424 2484 100524912 100524851 1.110000e-12 86.1
42 TraesCS3A01G179300 chr1A 88.235 68 7 1 2250 2316 37513293 37513226 5.150000e-11 80.5
43 TraesCS3A01G179300 chr5A 85.023 868 91 23 1316 2169 567048983 567048141 0.000000e+00 846.0
44 TraesCS3A01G179300 chr5A 90.650 631 47 3 1310 1931 428855292 428855919 0.000000e+00 828.0
45 TraesCS3A01G179300 chr5A 100.000 33 0 0 3291 3323 389050057 389050025 1.860000e-05 62.1
46 TraesCS3A01G179300 chr6A 85.766 822 89 10 4303 5124 338193386 338192593 0.000000e+00 845.0
47 TraesCS3A01G179300 chr6A 89.921 506 31 7 1316 1804 55975609 55976111 8.760000e-178 634.0
48 TraesCS3A01G179300 chr6A 86.350 337 41 4 1 337 520390894 520391225 4.560000e-96 363.0
49 TraesCS3A01G179300 chr6A 77.624 505 95 12 7 494 147212365 147211862 2.180000e-74 291.0
50 TraesCS3A01G179300 chr6A 80.052 381 64 10 122 494 70226497 70226121 7.910000e-69 272.0
51 TraesCS3A01G179300 chr6A 90.071 141 13 1 2421 2560 55975609 55975749 1.370000e-41 182.0
52 TraesCS3A01G179300 chr6A 88.652 141 13 3 2421 2558 55985574 55985714 1.070000e-37 169.0
53 TraesCS3A01G179300 chr6A 87.838 148 12 5 2421 2564 524762589 524762444 1.070000e-37 169.0
54 TraesCS3A01G179300 chr6D 88.543 707 51 7 1316 2012 458139445 458140131 0.000000e+00 830.0
55 TraesCS3A01G179300 chr6D 88.630 387 43 1 1803 2189 266069879 266070264 2.610000e-128 470.0
56 TraesCS3A01G179300 chr6D 84.330 485 67 7 1 480 378733859 378734339 3.380000e-127 466.0
57 TraesCS3A01G179300 chr6D 80.795 151 27 2 7 156 104540230 104540379 3.920000e-22 117.0
58 TraesCS3A01G179300 chr6D 89.247 93 9 1 2470 2561 458140559 458140651 1.410000e-21 115.0
59 TraesCS3A01G179300 chr6D 82.979 141 8 5 2421 2560 53130071 53130196 5.070000e-21 113.0
60 TraesCS3A01G179300 chr6D 80.851 141 11 4 2421 2560 458139445 458139570 5.110000e-16 97.1
61 TraesCS3A01G179300 chr6D 96.970 33 1 0 3291 3323 68361995 68361963 8.670000e-04 56.5
62 TraesCS3A01G179300 chr2D 87.917 720 66 11 1437 2154 7802418 7801718 0.000000e+00 828.0
63 TraesCS3A01G179300 chr2D 87.917 720 66 11 1437 2154 398694296 398693596 0.000000e+00 828.0
64 TraesCS3A01G179300 chr2B 83.855 830 81 27 4303 5132 491567761 491566985 0.000000e+00 741.0
65 TraesCS3A01G179300 chr2B 89.079 467 48 3 1883 2348 270225434 270225898 1.500000e-160 577.0
66 TraesCS3A01G179300 chr2B 92.248 258 17 3 5932 6188 622965319 622965574 4.560000e-96 363.0
67 TraesCS3A01G179300 chr2B 89.706 136 12 2 2426 2560 527265186 527265052 8.250000e-39 172.0
68 TraesCS3A01G179300 chr2B 96.341 82 3 0 1230 1311 270226170 270226251 1.080000e-27 135.0
69 TraesCS3A01G179300 chr2B 96.341 82 3 0 2335 2416 270226170 270226251 1.080000e-27 135.0
70 TraesCS3A01G179300 chr2B 98.462 65 1 0 1173 1237 270224652 270224716 1.410000e-21 115.0
71 TraesCS3A01G179300 chr2B 93.056 72 4 1 1172 1243 270225828 270225898 3.050000e-18 104.0
72 TraesCS3A01G179300 chr2B 81.452 124 14 7 761 883 482740521 482740406 6.610000e-15 93.5
73 TraesCS3A01G179300 chr2B 96.970 33 1 0 3859 3891 779244494 779244462 8.670000e-04 56.5
74 TraesCS3A01G179300 chr1D 83.943 847 56 33 1316 2151 62138224 62137447 0.000000e+00 737.0
75 TraesCS3A01G179300 chr1D 77.914 489 98 6 1 480 43119093 43119580 4.690000e-76 296.0
76 TraesCS3A01G179300 chr1D 79.088 373 71 5 1 368 99835791 99835421 3.710000e-62 250.0
77 TraesCS3A01G179300 chr1D 82.979 141 22 2 7 146 424734018 424734157 6.520000e-25 126.0
78 TraesCS3A01G179300 chr1D 82.069 145 5 13 2421 2560 32887758 32887886 3.050000e-18 104.0
79 TraesCS3A01G179300 chr1D 91.781 73 4 2 2489 2560 3526009 3525938 3.950000e-17 100.0
80 TraesCS3A01G179300 chr5B 83.595 829 77 29 4309 5132 360596091 360596865 0.000000e+00 723.0
81 TraesCS3A01G179300 chr5B 87.342 316 38 2 1875 2189 130931989 130932303 1.640000e-95 361.0
82 TraesCS3A01G179300 chr1B 86.015 665 71 10 4468 5132 282852854 282852212 0.000000e+00 693.0
83 TraesCS3A01G179300 chr1B 93.077 260 15 2 5931 6190 486986845 486987101 1.630000e-100 377.0
84 TraesCS3A01G179300 chr1B 78.916 498 95 7 7 494 486780744 486780247 4.630000e-86 329.0
85 TraesCS3A01G179300 chr1B 86.726 113 9 4 1316 1427 97678691 97678798 3.030000e-23 121.0
86 TraesCS3A01G179300 chr1B 95.161 62 3 0 4309 4370 282852965 282852904 1.420000e-16 99.0
87 TraesCS3A01G179300 chr1B 93.651 63 3 1 2421 2482 97678691 97678753 6.610000e-15 93.5
88 TraesCS3A01G179300 chr1B 90.625 64 6 0 1316 1379 253091719 253091656 1.110000e-12 86.1
89 TraesCS3A01G179300 chr2A 84.000 775 64 29 1316 2089 99163901 99163186 0.000000e+00 689.0
90 TraesCS3A01G179300 chr2A 90.308 227 6 5 2335 2560 9903742 9903531 3.650000e-72 283.0
91 TraesCS3A01G179300 chr2A 89.706 68 5 2 1172 1237 9904073 9904006 1.110000e-12 86.1
92 TraesCS3A01G179300 chr6B 89.655 406 38 4 1390 1793 68729158 68729561 1.190000e-141 514.0
93 TraesCS3A01G179300 chr6B 83.158 475 74 4 1 471 565196426 565196898 4.440000e-116 429.0
94 TraesCS3A01G179300 chr6B 93.050 259 16 2 5932 6190 557932432 557932688 1.630000e-100 377.0
95 TraesCS3A01G179300 chr6B 82.946 129 15 5 2421 2548 703559302 703559424 6.560000e-20 110.0
96 TraesCS3A01G179300 chr6B 91.549 71 5 1 2488 2558 554645855 554645786 5.110000e-16 97.1
97 TraesCS3A01G179300 chr4A 96.947 262 8 0 5932 6193 476709311 476709572 2.050000e-119 440.0
98 TraesCS3A01G179300 chr4A 96.565 262 9 0 5932 6193 476699795 476700056 9.530000e-118 435.0
99 TraesCS3A01G179300 chr4A 88.750 80 9 0 3858 3937 158186580 158186659 1.420000e-16 99.0
100 TraesCS3A01G179300 chr4A 97.143 35 1 0 3291 3325 528053094 528053128 6.700000e-05 60.2
101 TraesCS3A01G179300 chr5D 77.445 634 121 16 4590 5207 472808650 472808023 5.900000e-95 359.0
102 TraesCS3A01G179300 chr5D 77.004 474 67 25 1 467 503201819 503201381 3.730000e-57 233.0
103 TraesCS3A01G179300 chr5D 89.655 145 9 6 2421 2560 41800049 41800192 4.930000e-41 180.0
104 TraesCS3A01G179300 chr5D 100.000 28 0 0 3297 3324 539968097 539968070 1.100000e-02 52.8
105 TraesCS3A01G179300 chr4D 85.759 316 43 2 1875 2189 202705512 202705826 3.580000e-87 333.0
106 TraesCS3A01G179300 chr4D 83.217 286 43 3 199 480 8829052 8829336 2.220000e-64 257.0
107 TraesCS3A01G179300 chr4B 78.458 506 97 7 1 497 83309550 83310052 2.790000e-83 320.0
108 TraesCS3A01G179300 chr4B 80.702 285 46 5 200 480 16805953 16806232 4.860000e-51 213.0
109 TraesCS3A01G179300 chr4B 83.673 98 16 0 3858 3955 394107231 394107134 6.610000e-15 93.5
110 TraesCS3A01G179300 chr4B 100.000 30 0 0 3298 3327 632709455 632709484 8.670000e-04 56.5
111 TraesCS3A01G179300 chr3B 89.535 86 7 2 2421 2505 4523692 4523776 2.360000e-19 108.0
112 TraesCS3A01G179300 chrUn 88.506 87 6 2 1316 1402 298359647 298359729 1.100000e-17 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G179300 chr3A 207240844 207247036 6192 True 4050.333333 11437 93.450000 1 6193 3 chr3A.!!$R2 6192
1 TraesCS3A01G179300 chr3A 233134179 233135497 1318 False 500.500000 893 91.495500 1171 2342 2 chr3A.!!$F1 1171
2 TraesCS3A01G179300 chr3D 169885546 169890074 4528 True 2187.333333 3768 93.458000 1 5931 3 chr3D.!!$R6 5930
3 TraesCS3A01G179300 chr3D 499949348 499950048 700 True 828.000000 828 87.917000 1437 2154 1 chr3D.!!$R5 717
4 TraesCS3A01G179300 chr3D 313992792 313993293 501 False 305.000000 305 78.107000 1 494 1 chr3D.!!$F1 493
5 TraesCS3A01G179300 chr7D 183320439 183322837 2398 True 570.666667 1009 87.417000 968 5207 3 chr7D.!!$R2 4239
6 TraesCS3A01G179300 chr7B 152051668 152054083 2415 True 564.666667 998 87.551000 972 5207 3 chr7B.!!$R4 4235
7 TraesCS3A01G179300 chr7A 287638064 287638863 799 True 896.000000 896 86.763000 4303 5132 1 chr7A.!!$R3 829
8 TraesCS3A01G179300 chr7A 188025831 188028420 2589 False 559.000000 981 87.449333 972 5207 3 chr7A.!!$F3 4235
9 TraesCS3A01G179300 chr7A 729688438 729690883 2445 True 352.500000 549 87.837500 1531 2560 2 chr7A.!!$R4 1029
10 TraesCS3A01G179300 chr1A 186717284 186718083 799 True 929.000000 929 87.470000 4303 5132 1 chr1A.!!$R4 829
11 TraesCS3A01G179300 chr5A 567048141 567048983 842 True 846.000000 846 85.023000 1316 2169 1 chr5A.!!$R2 853
12 TraesCS3A01G179300 chr5A 428855292 428855919 627 False 828.000000 828 90.650000 1310 1931 1 chr5A.!!$F1 621
13 TraesCS3A01G179300 chr6A 338192593 338193386 793 True 845.000000 845 85.766000 4303 5124 1 chr6A.!!$R3 821
14 TraesCS3A01G179300 chr6A 55975609 55976111 502 False 408.000000 634 89.996000 1316 2560 2 chr6A.!!$F3 1244
15 TraesCS3A01G179300 chr6A 147211862 147212365 503 True 291.000000 291 77.624000 7 494 1 chr6A.!!$R2 487
16 TraesCS3A01G179300 chr6D 458139445 458140651 1206 False 347.366667 830 86.213667 1316 2561 3 chr6D.!!$F5 1245
17 TraesCS3A01G179300 chr2D 7801718 7802418 700 True 828.000000 828 87.917000 1437 2154 1 chr2D.!!$R1 717
18 TraesCS3A01G179300 chr2D 398693596 398694296 700 True 828.000000 828 87.917000 1437 2154 1 chr2D.!!$R2 717
19 TraesCS3A01G179300 chr2B 491566985 491567761 776 True 741.000000 741 83.855000 4303 5132 1 chr2B.!!$R2 829
20 TraesCS3A01G179300 chr2B 270224652 270226251 1599 False 213.200000 577 94.655800 1172 2416 5 chr2B.!!$F2 1244
21 TraesCS3A01G179300 chr1D 62137447 62138224 777 True 737.000000 737 83.943000 1316 2151 1 chr1D.!!$R2 835
22 TraesCS3A01G179300 chr5B 360596091 360596865 774 False 723.000000 723 83.595000 4309 5132 1 chr5B.!!$F2 823
23 TraesCS3A01G179300 chr1B 282852212 282852965 753 True 396.000000 693 90.588000 4309 5132 2 chr1B.!!$R3 823
24 TraesCS3A01G179300 chr2A 99163186 99163901 715 True 689.000000 689 84.000000 1316 2089 1 chr2A.!!$R1 773
25 TraesCS3A01G179300 chr5D 472808023 472808650 627 True 359.000000 359 77.445000 4590 5207 1 chr5D.!!$R1 617
26 TraesCS3A01G179300 chr4B 83309550 83310052 502 False 320.000000 320 78.458000 1 497 1 chr4B.!!$F2 496

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
147 148 0.105593 GAAGCATGAGATGGAGGCGA 59.894 55.000 0.00 0.0 0.00 5.54 F
1335 1638 0.037326 CCGTGATGTAGCCTGTGTGT 60.037 55.000 0.00 0.0 0.00 3.72 F
2360 4628 0.602905 GTGCGTGGAGTTAGTGGCTT 60.603 55.000 0.00 0.0 0.00 4.35 F
2548 4833 0.038526 GTCCGGCGTGAGAAAGAGAA 60.039 55.000 6.01 0.0 0.00 2.87 F
2562 4847 0.107410 AGAGAACGGCAACAACACCA 60.107 50.000 0.00 0.0 0.00 4.17 F
3394 5926 1.202582 CTCTAGAGGTGGTGGTGTTCG 59.797 57.143 12.27 0.0 0.00 3.95 F
4794 7435 0.178992 AGCTGCTTTGTGGGCACTTA 60.179 50.000 0.00 0.0 35.71 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1683 2042 2.359107 CATGCAGTGCCTCCACGT 60.359 61.111 13.72 0.00 46.62 4.49 R
2484 4767 0.178533 TTTTCCCGACGACCAACACT 59.821 50.000 0.00 0.00 0.00 3.55 R
3470 6002 0.106769 TGGTGCATCCACACACAAGT 60.107 50.000 0.00 0.00 43.88 3.16 R
3665 6234 0.390472 CTGGACTTGGCTCCGAGAAC 60.390 60.000 10.07 3.20 32.22 3.01 R
4506 7134 0.969149 ACTCACGGATCAAGTGCAGA 59.031 50.000 13.69 0.00 39.31 4.26 R
4842 7483 0.042581 TGGGAGCTCTACATGTGGGA 59.957 55.000 14.64 5.91 0.00 4.37 R
5975 8639 0.032952 TAAGAGTGGTGACGTGGCAC 59.967 55.000 7.79 7.79 38.05 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 6.732154 CAAGACAAAGAAGAGCAAATGAAGA 58.268 36.000 0.00 0.00 0.00 2.87
90 91 6.222038 TGAAGACCTACATGGAGATACAAC 57.778 41.667 6.48 0.00 39.71 3.32
95 96 4.468510 ACCTACATGGAGATACAACGGAAA 59.531 41.667 6.48 0.00 39.71 3.13
101 102 5.934935 TGGAGATACAACGGAAAAAGTTC 57.065 39.130 0.00 0.00 0.00 3.01
133 134 2.735444 CGGAGATGTAAGCGAAGAAGCA 60.735 50.000 0.00 0.00 40.15 3.91
147 148 0.105593 GAAGCATGAGATGGAGGCGA 59.894 55.000 0.00 0.00 0.00 5.54
203 204 2.867975 CAAAGCCAAGACCAAAGCAAAG 59.132 45.455 0.00 0.00 0.00 2.77
286 291 2.967201 TGTCCCCGAGAAAGTGAACTTA 59.033 45.455 0.00 0.00 34.61 2.24
302 307 5.578727 GTGAACTTAGTTCGAGAAGATGCAT 59.421 40.000 18.64 0.00 44.55 3.96
346 351 8.651589 AATGATTGATTTATGATGGAGAGCAT 57.348 30.769 0.00 0.00 31.62 3.79
348 353 7.228590 TGATTGATTTATGATGGAGAGCATCA 58.771 34.615 0.00 0.00 42.41 3.07
371 376 2.437200 TTTTTGTATGCCAGCACTGC 57.563 45.000 0.00 0.00 0.00 4.40
372 377 1.619654 TTTTGTATGCCAGCACTGCT 58.380 45.000 0.00 0.00 40.77 4.24
443 451 1.599518 TTGGCATGTGTGTCGGTCC 60.600 57.895 0.00 0.00 30.74 4.46
463 471 1.069703 CCTGTCAAGTGCGTCAACATG 60.070 52.381 0.00 0.00 0.00 3.21
509 517 2.308570 TGGCATTGTCTCAACTATGGGT 59.691 45.455 3.00 0.00 38.55 4.51
542 550 2.408271 TTGGCATGATCTCTGACCAC 57.592 50.000 0.00 0.00 0.00 4.16
556 564 1.757118 TGACCACGGGCATTTTTCAAA 59.243 42.857 0.00 0.00 0.00 2.69
560 568 4.962155 ACCACGGGCATTTTTCAAATTTA 58.038 34.783 0.00 0.00 0.00 1.40
578 586 9.698309 TCAAATTTAAATTATTTTCTGCACGGA 57.302 25.926 13.68 0.00 0.00 4.69
582 590 8.873215 TTTAAATTATTTTCTGCACGGACAAA 57.127 26.923 0.00 0.00 0.00 2.83
588 596 4.377839 TTTCTGCACGGACAAAATTTGA 57.622 36.364 13.19 0.00 0.00 2.69
589 597 3.624326 TCTGCACGGACAAAATTTGAG 57.376 42.857 13.19 5.98 0.00 3.02
594 602 1.265905 ACGGACAAAATTTGAGTCGGC 59.734 47.619 21.30 9.30 36.45 5.54
604 612 3.384532 GAGTCGGCCGGTTGGGTA 61.385 66.667 27.83 0.00 38.44 3.69
607 615 4.006357 TCGGCCGGTTGGGTACAC 62.006 66.667 27.83 0.00 38.44 2.90
614 622 2.293877 GGTTGGGTACACCGATCCT 58.706 57.895 0.00 0.00 44.64 3.24
619 627 1.272592 TGGGTACACCGATCCTACACA 60.273 52.381 0.00 0.00 44.64 3.72
626 634 1.319541 CCGATCCTACACAGACGGAT 58.680 55.000 0.00 0.00 42.40 4.18
627 635 1.001268 CCGATCCTACACAGACGGATG 60.001 57.143 0.00 0.00 42.40 3.51
631 639 1.107114 CCTACACAGACGGATGAGCT 58.893 55.000 0.00 0.00 0.00 4.09
637 645 1.552337 ACAGACGGATGAGCTGACAAT 59.448 47.619 0.00 0.00 33.94 2.71
647 655 3.349927 TGAGCTGACAATGGATCAAAGG 58.650 45.455 0.00 0.00 0.00 3.11
649 657 3.618351 AGCTGACAATGGATCAAAGGAG 58.382 45.455 0.00 0.00 0.00 3.69
657 665 3.417069 TGGATCAAAGGAGCGAAAAGA 57.583 42.857 0.00 0.00 0.00 2.52
658 666 3.338249 TGGATCAAAGGAGCGAAAAGAG 58.662 45.455 0.00 0.00 0.00 2.85
666 674 3.077359 AGGAGCGAAAAGAGGACAAATG 58.923 45.455 0.00 0.00 0.00 2.32
667 675 2.414691 GGAGCGAAAAGAGGACAAATGC 60.415 50.000 0.00 0.00 0.00 3.56
668 676 2.485814 GAGCGAAAAGAGGACAAATGCT 59.514 45.455 0.00 0.00 0.00 3.79
669 677 2.485814 AGCGAAAAGAGGACAAATGCTC 59.514 45.455 0.00 0.00 43.43 4.26
676 684 2.332654 GGACAAATGCTCGCCCGTT 61.333 57.895 0.00 0.00 0.00 4.44
677 685 1.579429 GACAAATGCTCGCCCGTTT 59.421 52.632 0.00 0.00 0.00 3.60
690 698 2.482333 CCGTTTGTTTGGGTCGGCA 61.482 57.895 0.00 0.00 35.01 5.69
725 733 2.670148 AATCCGACCCAGTCCAGCC 61.670 63.158 0.00 0.00 0.00 4.85
753 761 4.865761 CGCCGTAGCTTAGCGCCA 62.866 66.667 2.29 0.00 43.72 5.69
754 762 3.262686 GCCGTAGCTTAGCGCCAC 61.263 66.667 2.29 0.00 40.39 5.01
755 763 2.585247 CCGTAGCTTAGCGCCACC 60.585 66.667 2.29 0.00 40.39 4.61
756 764 2.954868 CGTAGCTTAGCGCCACCG 60.955 66.667 2.29 0.00 40.39 4.94
810 818 0.957395 TCGCCGTCTCCGTTCTACTT 60.957 55.000 0.00 0.00 0.00 2.24
961 969 2.041922 TGCCACTAGATCCGCCCT 60.042 61.111 0.00 0.00 0.00 5.19
1152 1160 2.750350 CTCCTCAACACGGGCCTT 59.250 61.111 0.84 0.00 0.00 4.35
1169 1177 2.462255 CTTGTCGCCATGTGCACCAC 62.462 60.000 15.69 0.00 41.33 4.16
1335 1638 0.037326 CCGTGATGTAGCCTGTGTGT 60.037 55.000 0.00 0.00 0.00 3.72
1468 1826 1.699083 TCATGAGCTTGGTGTCTTGGA 59.301 47.619 0.00 0.00 0.00 3.53
1947 2596 4.778143 ATTGGTGCGGTCGGGCTC 62.778 66.667 0.00 0.00 0.00 4.70
2100 4084 4.682334 TCGGGTACACGGGCTGGA 62.682 66.667 19.08 0.00 0.00 3.86
2217 4201 2.722487 GGCGGACGAGATGACGAT 59.278 61.111 0.00 0.00 37.03 3.73
2225 4209 1.738350 ACGAGATGACGATGACGAGTT 59.262 47.619 0.00 0.00 42.66 3.01
2238 4222 2.097825 GACGAGTTAGGGCTCCTGTTA 58.902 52.381 4.16 0.00 34.61 2.41
2269 4253 1.806247 CGGCGATGTCATGGCTTAGAA 60.806 52.381 17.91 0.00 34.17 2.10
2360 4628 0.602905 GTGCGTGGAGTTAGTGGCTT 60.603 55.000 0.00 0.00 0.00 4.35
2416 4691 5.496556 CACTGTAAACATCATGTTAGGGGA 58.503 41.667 2.67 0.00 40.14 4.81
2419 4694 6.134535 TGTAAACATCATGTTAGGGGAGTT 57.865 37.500 2.67 0.00 40.14 3.01
2439 4722 0.670546 GCCGTGATGTAGCTGTGTGT 60.671 55.000 0.00 0.00 0.00 3.72
2462 4745 3.630312 TGAATATAAAGGAGGCGTTTGGC 59.370 43.478 0.00 0.00 42.51 4.52
2495 4778 3.096633 TTGCCGGAGTGTTGGTCGT 62.097 57.895 5.05 0.00 0.00 4.34
2548 4833 0.038526 GTCCGGCGTGAGAAAGAGAA 60.039 55.000 6.01 0.00 0.00 2.87
2561 4846 1.021968 AAGAGAACGGCAACAACACC 58.978 50.000 0.00 0.00 0.00 4.16
2562 4847 0.107410 AGAGAACGGCAACAACACCA 60.107 50.000 0.00 0.00 0.00 4.17
2706 4991 1.595993 CTTCTCCGTCGCCTTCCTCA 61.596 60.000 0.00 0.00 0.00 3.86
2709 4994 4.796231 CCGTCGCCTTCCTCACCG 62.796 72.222 0.00 0.00 0.00 4.94
2814 5099 2.046988 TGCTGTCGCACATGAGGG 60.047 61.111 0.00 0.00 42.25 4.30
2935 5220 9.746457 AATCTTCTTTTCCTTTGAGTAAGCTAT 57.254 29.630 0.00 0.00 32.19 2.97
2962 5247 9.759473 ATCTCAAATCCTTCTTTCTATTCCAAA 57.241 29.630 0.00 0.00 0.00 3.28
3004 5295 4.219115 TCTTTTTATTGCCCCACTTCACA 58.781 39.130 0.00 0.00 0.00 3.58
3010 5301 1.619654 TGCCCCACTTCACATTTCAG 58.380 50.000 0.00 0.00 0.00 3.02
3024 5315 9.347240 CTTCACATTTCAGAAGGTATCCAATAT 57.653 33.333 0.00 0.00 38.03 1.28
3159 5458 2.164219 CCATGTTTCATGGAAAGGGACG 59.836 50.000 20.19 0.00 41.64 4.79
3294 5788 8.993424 AGAATGTTACATACTCCCTCTGTAAAT 58.007 33.333 0.00 0.00 37.17 1.40
3309 5835 8.997323 CCCTCTGTAAATGCTCTTATATTTCTG 58.003 37.037 0.00 0.00 0.00 3.02
3394 5926 1.202582 CTCTAGAGGTGGTGGTGTTCG 59.797 57.143 12.27 0.00 0.00 3.95
3416 5948 1.620323 GCTCCCTTTGCAAGTCCATTT 59.380 47.619 0.00 0.00 0.00 2.32
3443 5975 7.493367 AGAATCCTGGAAGAATAGTTTAGACG 58.507 38.462 0.00 0.00 34.07 4.18
3468 6000 4.882671 CAGTTTAAGCGCTGGATGTTAT 57.117 40.909 12.58 0.00 0.00 1.89
3469 6001 4.591202 CAGTTTAAGCGCTGGATGTTATG 58.409 43.478 12.58 0.00 0.00 1.90
3470 6002 4.332543 CAGTTTAAGCGCTGGATGTTATGA 59.667 41.667 12.58 0.00 0.00 2.15
3471 6003 4.332819 AGTTTAAGCGCTGGATGTTATGAC 59.667 41.667 12.58 0.76 0.00 3.06
3472 6004 2.698855 AAGCGCTGGATGTTATGACT 57.301 45.000 12.58 0.00 0.00 3.41
3474 6006 2.283298 AGCGCTGGATGTTATGACTTG 58.717 47.619 10.39 0.00 0.00 3.16
3483 6024 4.943705 GGATGTTATGACTTGTGTGTGGAT 59.056 41.667 0.00 0.00 0.00 3.41
3539 6080 5.597806 TCATAACTTATACTTGGCCTGACG 58.402 41.667 3.32 0.00 0.00 4.35
3544 6085 2.184020 ATACTTGGCCTGACGCTGCA 62.184 55.000 3.32 0.00 37.74 4.41
3557 6125 1.208052 ACGCTGCAGTATCCAAGTCAT 59.792 47.619 16.64 0.00 0.00 3.06
3560 6128 2.611292 GCTGCAGTATCCAAGTCATCAC 59.389 50.000 16.64 0.00 0.00 3.06
3608 6176 5.065218 CACTAAGCCATGTGTAGATTTGTCC 59.935 44.000 0.00 0.00 0.00 4.02
3618 6186 7.433708 TGTGTAGATTTGTCCAGTATGTTTG 57.566 36.000 0.00 0.00 0.00 2.93
3706 6275 4.113354 GGAACTTGTTAGCTACTCCATCG 58.887 47.826 0.00 0.00 0.00 3.84
3707 6276 4.381718 GGAACTTGTTAGCTACTCCATCGT 60.382 45.833 0.00 0.00 0.00 3.73
3761 6331 3.356290 AGTCAAGTGGTGCAAAGTTTCT 58.644 40.909 0.00 0.00 0.00 2.52
3762 6332 3.763897 AGTCAAGTGGTGCAAAGTTTCTT 59.236 39.130 0.00 0.00 0.00 2.52
3796 6366 7.462571 AGGGAAAACTATCAACAACAATACC 57.537 36.000 0.00 0.00 0.00 2.73
3959 6529 2.039216 TCTGAGTCGGAGAGAGTGTCTT 59.961 50.000 0.00 0.00 36.95 3.01
3977 6549 8.989653 AGTGTCTTCTTAACTCTAAGCAATAC 57.010 34.615 0.00 0.00 35.42 1.89
4041 6613 9.458374 TTTTAAATTGCAGTAAGACTTAACAGC 57.542 29.630 0.00 2.60 0.00 4.40
4411 7033 5.011533 TGCTCTTCTTCATAGCTATCTTCCC 59.988 44.000 2.34 0.00 37.16 3.97
4483 7111 8.540507 ACTTCAGTGTCTGATATGTTATACCT 57.459 34.615 0.24 0.00 40.39 3.08
4506 7134 1.584724 CCAGGAACTATGGTGTCCCT 58.415 55.000 6.76 0.95 36.02 4.20
4540 7168 2.031420 CGTGAGTTGTACGAGACCTTCA 60.031 50.000 0.00 0.00 43.82 3.02
4608 7236 8.585471 AGATAACTTCCAACATGAATGAATGT 57.415 30.769 0.00 0.00 42.62 2.71
4652 7281 8.453320 TGATGAGCTTAATGTGTGAGTTATTTG 58.547 33.333 0.00 0.00 0.00 2.32
4794 7435 0.178992 AGCTGCTTTGTGGGCACTTA 60.179 50.000 0.00 0.00 35.71 2.24
4842 7483 2.893637 CTAGAGCGCCAACATACTTGT 58.106 47.619 2.29 0.00 37.82 3.16
4893 7534 2.418746 GGACAATGGACGTACTGCATCT 60.419 50.000 0.00 0.00 28.88 2.90
4946 7587 2.428888 CTTGGTGAGCTTCCTTTTGC 57.571 50.000 9.68 0.00 0.00 3.68
4956 7598 3.067320 AGCTTCCTTTTGCTGTTCTGTTC 59.933 43.478 0.00 0.00 38.21 3.18
4965 7609 7.277539 CCTTTTGCTGTTCTGTTCATTGTTTTA 59.722 33.333 0.00 0.00 0.00 1.52
5001 7645 5.886960 AACAATTTCTATCAGTCAGTGCC 57.113 39.130 0.00 0.00 0.00 5.01
5087 7731 1.078848 CGCTCCAGGTTCAGAAGGG 60.079 63.158 0.00 0.00 0.00 3.95
5252 7897 4.693095 TGTAATAGTGCGAAATGTCAAGCA 59.307 37.500 0.00 0.00 37.26 3.91
5264 7910 4.637483 ATGTCAAGCATTTGGTATTCCG 57.363 40.909 0.00 0.00 33.14 4.30
5289 7935 7.819415 CGCTTGGGATACTTTAATATGATCAGA 59.181 37.037 0.09 0.00 0.00 3.27
5336 7982 4.736793 GCGGATCATCATTTTGCAACTTAG 59.263 41.667 0.00 0.00 0.00 2.18
5377 8023 3.808466 TTGCAAACTGCCACATTGTTA 57.192 38.095 0.00 0.00 44.23 2.41
5379 8025 3.452474 TGCAAACTGCCACATTGTTAAC 58.548 40.909 0.00 0.00 44.23 2.01
5380 8026 3.131933 TGCAAACTGCCACATTGTTAACT 59.868 39.130 7.22 0.00 44.23 2.24
5382 8028 4.025813 GCAAACTGCCACATTGTTAACTTG 60.026 41.667 7.22 7.30 37.42 3.16
5384 8030 3.561143 ACTGCCACATTGTTAACTTGGA 58.439 40.909 15.86 0.00 0.00 3.53
5386 8032 4.588528 ACTGCCACATTGTTAACTTGGAAT 59.411 37.500 15.86 2.65 0.00 3.01
5387 8033 4.880759 TGCCACATTGTTAACTTGGAATG 58.119 39.130 15.86 14.20 32.99 2.67
5391 8037 7.096551 GCCACATTGTTAACTTGGAATGTATT 58.903 34.615 17.01 0.00 37.01 1.89
5407 8053 7.491682 GGAATGTATTTATGAACATTGCCAGT 58.508 34.615 5.49 0.00 44.27 4.00
5413 8059 5.543507 TTATGAACATTGCCAGTTTGGTT 57.456 34.783 0.00 0.00 40.46 3.67
5460 8106 4.020543 TGGTGGCTGGATAAAAATGGTAC 58.979 43.478 0.00 0.00 0.00 3.34
5461 8107 3.383505 GGTGGCTGGATAAAAATGGTACC 59.616 47.826 4.43 4.43 0.00 3.34
5462 8108 4.020543 GTGGCTGGATAAAAATGGTACCA 58.979 43.478 18.99 18.99 0.00 3.25
5463 8109 4.020543 TGGCTGGATAAAAATGGTACCAC 58.979 43.478 19.09 1.80 0.00 4.16
5464 8110 4.264172 TGGCTGGATAAAAATGGTACCACT 60.264 41.667 19.09 2.12 0.00 4.00
5465 8111 4.709886 GGCTGGATAAAAATGGTACCACTT 59.290 41.667 19.09 10.48 0.00 3.16
5466 8112 5.394115 GGCTGGATAAAAATGGTACCACTTG 60.394 44.000 19.09 0.00 0.00 3.16
5467 8113 5.185056 GCTGGATAAAAATGGTACCACTTGT 59.815 40.000 19.09 10.89 0.00 3.16
5468 8114 6.295067 GCTGGATAAAAATGGTACCACTTGTT 60.295 38.462 19.09 15.47 0.00 2.83
5469 8115 7.094118 GCTGGATAAAAATGGTACCACTTGTTA 60.094 37.037 19.09 16.97 0.00 2.41
5470 8116 8.343168 TGGATAAAAATGGTACCACTTGTTAG 57.657 34.615 19.09 0.00 0.00 2.34
5471 8117 7.945664 TGGATAAAAATGGTACCACTTGTTAGT 59.054 33.333 19.09 8.51 34.00 2.24
5472 8118 8.799367 GGATAAAAATGGTACCACTTGTTAGTT 58.201 33.333 19.09 5.96 30.26 2.24
5473 8119 9.836076 GATAAAAATGGTACCACTTGTTAGTTC 57.164 33.333 19.09 9.79 30.26 3.01
5474 8120 7.891498 AAAAATGGTACCACTTGTTAGTTCT 57.109 32.000 19.09 0.00 30.26 3.01
5475 8121 7.506328 AAAATGGTACCACTTGTTAGTTCTC 57.494 36.000 19.09 0.00 30.26 2.87
5476 8122 4.612264 TGGTACCACTTGTTAGTTCTCC 57.388 45.455 11.60 0.00 30.26 3.71
5477 8123 4.228824 TGGTACCACTTGTTAGTTCTCCT 58.771 43.478 11.60 0.00 30.26 3.69
5478 8124 4.657039 TGGTACCACTTGTTAGTTCTCCTT 59.343 41.667 11.60 0.00 30.26 3.36
5479 8125 5.840149 TGGTACCACTTGTTAGTTCTCCTTA 59.160 40.000 11.60 0.00 30.26 2.69
5480 8126 6.162079 GGTACCACTTGTTAGTTCTCCTTAC 58.838 44.000 7.15 0.00 30.26 2.34
5481 8127 6.014755 GGTACCACTTGTTAGTTCTCCTTACT 60.015 42.308 7.15 0.00 30.26 2.24
5558 8204 4.237724 GTCTTTTCTATTTTGCACCTGGC 58.762 43.478 0.00 0.00 45.13 4.85
5560 8206 2.300956 TTCTATTTTGCACCTGGCCA 57.699 45.000 4.71 4.71 43.89 5.36
5566 8212 0.040058 TTTGCACCTGGCCATCTCAT 59.960 50.000 5.51 0.00 43.89 2.90
5568 8214 0.681887 TGCACCTGGCCATCTCATTG 60.682 55.000 5.51 0.00 43.89 2.82
5650 8297 5.542779 AGAATCCTAAATAGTCGGTGATGC 58.457 41.667 0.00 0.00 0.00 3.91
5702 8349 5.109903 GTCGAGCTGTGGTTATTGTATTCT 58.890 41.667 0.00 0.00 0.00 2.40
5720 8367 8.856153 TGTATTCTGTTTTGGAGTATTAGCAA 57.144 30.769 0.00 0.00 0.00 3.91
5738 8385 4.677182 AGCAATTGGTCTGGTTTCCTTAT 58.323 39.130 3.82 0.00 0.00 1.73
5740 8387 4.747810 CAATTGGTCTGGTTTCCTTATGC 58.252 43.478 0.00 0.00 0.00 3.14
5787 8434 5.690865 TGTACACCCAAGTCTCTTGAAATT 58.309 37.500 10.54 0.00 0.00 1.82
5788 8435 5.763204 TGTACACCCAAGTCTCTTGAAATTC 59.237 40.000 10.54 0.00 0.00 2.17
5789 8436 3.815401 ACACCCAAGTCTCTTGAAATTCG 59.185 43.478 10.54 0.00 0.00 3.34
5790 8437 2.814336 ACCCAAGTCTCTTGAAATTCGC 59.186 45.455 10.54 0.00 0.00 4.70
5791 8438 2.162408 CCCAAGTCTCTTGAAATTCGCC 59.838 50.000 10.54 0.00 0.00 5.54
5793 8440 3.126000 CCAAGTCTCTTGAAATTCGCCTC 59.874 47.826 10.54 0.00 0.00 4.70
5822 8475 7.355778 GGTTATGCAATACAGATAAGTTGCTC 58.644 38.462 9.87 0.18 45.28 4.26
5823 8476 7.227512 GGTTATGCAATACAGATAAGTTGCTCT 59.772 37.037 9.87 1.53 45.28 4.09
5833 8486 7.615403 ACAGATAAGTTGCTCTTCTAACATGA 58.385 34.615 0.00 0.00 37.56 3.07
5849 8513 7.479579 TCTAACATGATATTAGAGCCCTAGGT 58.520 38.462 8.29 0.00 34.46 3.08
5859 8523 6.496144 TTAGAGCCCTAGGTTTCTTTATCC 57.504 41.667 15.24 0.00 0.00 2.59
5862 8526 3.202373 AGCCCTAGGTTTCTTTATCCCAC 59.798 47.826 8.29 0.00 0.00 4.61
5895 8559 2.096657 GCTCTTTCAGATCGCTTTTCCC 59.903 50.000 0.00 0.00 0.00 3.97
5908 8572 1.136305 CTTTTCCCGGCGACTGATCTA 59.864 52.381 9.30 0.00 0.00 1.98
5916 8580 2.760374 GGCGACTGATCTAATTCCCAG 58.240 52.381 0.00 0.00 0.00 4.45
5933 8597 1.468985 CAGTCGATCTGGTCTCCTGT 58.531 55.000 7.01 0.00 40.23 4.00
5934 8598 1.133982 CAGTCGATCTGGTCTCCTGTG 59.866 57.143 7.01 0.00 40.23 3.66
5935 8599 1.004862 AGTCGATCTGGTCTCCTGTGA 59.995 52.381 0.00 0.00 0.00 3.58
5936 8600 1.133407 GTCGATCTGGTCTCCTGTGAC 59.867 57.143 0.00 0.00 36.31 3.67
5937 8601 0.099613 CGATCTGGTCTCCTGTGACG 59.900 60.000 0.00 0.00 37.81 4.35
5938 8602 0.457851 GATCTGGTCTCCTGTGACGG 59.542 60.000 0.00 0.00 37.81 4.79
5939 8603 1.608717 ATCTGGTCTCCTGTGACGGC 61.609 60.000 0.00 0.00 37.81 5.68
5940 8604 3.302347 CTGGTCTCCTGTGACGGCC 62.302 68.421 0.00 0.00 37.81 6.13
5941 8605 4.436998 GGTCTCCTGTGACGGCCG 62.437 72.222 26.86 26.86 37.81 6.13
5942 8606 4.436998 GTCTCCTGTGACGGCCGG 62.437 72.222 31.76 11.11 0.00 6.13
5943 8607 4.671590 TCTCCTGTGACGGCCGGA 62.672 66.667 31.76 14.83 0.00 5.14
5944 8608 3.461773 CTCCTGTGACGGCCGGAT 61.462 66.667 31.76 9.62 0.00 4.18
5945 8609 2.043752 TCCTGTGACGGCCGGATA 60.044 61.111 31.76 12.48 0.00 2.59
5946 8610 1.672854 CTCCTGTGACGGCCGGATAA 61.673 60.000 31.76 11.48 0.00 1.75
5947 8611 1.046472 TCCTGTGACGGCCGGATAAT 61.046 55.000 31.76 7.71 0.00 1.28
5948 8612 0.179056 CCTGTGACGGCCGGATAATT 60.179 55.000 31.76 6.78 0.00 1.40
5949 8613 1.069513 CCTGTGACGGCCGGATAATTA 59.930 52.381 31.76 0.60 0.00 1.40
5950 8614 2.484065 CCTGTGACGGCCGGATAATTAA 60.484 50.000 31.76 5.28 0.00 1.40
5951 8615 2.800544 CTGTGACGGCCGGATAATTAAG 59.199 50.000 31.76 11.49 0.00 1.85
5952 8616 1.529865 GTGACGGCCGGATAATTAAGC 59.470 52.381 31.76 5.57 0.00 3.09
5953 8617 1.414919 TGACGGCCGGATAATTAAGCT 59.585 47.619 31.76 2.41 0.00 3.74
5954 8618 2.629137 TGACGGCCGGATAATTAAGCTA 59.371 45.455 31.76 0.00 0.00 3.32
5955 8619 3.259876 TGACGGCCGGATAATTAAGCTAT 59.740 43.478 31.76 1.61 0.00 2.97
5956 8620 4.463539 TGACGGCCGGATAATTAAGCTATA 59.536 41.667 31.76 0.00 0.00 1.31
5957 8621 5.007385 ACGGCCGGATAATTAAGCTATAG 57.993 43.478 31.76 0.00 0.00 1.31
5958 8622 4.465305 ACGGCCGGATAATTAAGCTATAGT 59.535 41.667 31.76 0.00 0.00 2.12
5959 8623 5.653769 ACGGCCGGATAATTAAGCTATAGTA 59.346 40.000 31.76 0.00 0.00 1.82
5960 8624 6.153340 ACGGCCGGATAATTAAGCTATAGTAA 59.847 38.462 31.76 0.00 0.00 2.24
5961 8625 7.147776 ACGGCCGGATAATTAAGCTATAGTAAT 60.148 37.037 31.76 0.00 0.00 1.89
5962 8626 7.381678 CGGCCGGATAATTAAGCTATAGTAATC 59.618 40.741 20.10 0.00 0.00 1.75
5963 8627 7.656542 GGCCGGATAATTAAGCTATAGTAATCC 59.343 40.741 5.05 0.00 0.00 3.01
5964 8628 7.656542 GCCGGATAATTAAGCTATAGTAATCCC 59.343 40.741 5.05 1.89 0.00 3.85
5965 8629 8.701895 CCGGATAATTAAGCTATAGTAATCCCA 58.298 37.037 0.00 0.00 0.00 4.37
5979 8643 8.919777 ATAGTAATCCCAAGTTAAATAGTGCC 57.080 34.615 0.00 0.00 0.00 5.01
5980 8644 6.727394 AGTAATCCCAAGTTAAATAGTGCCA 58.273 36.000 0.00 0.00 0.00 4.92
5981 8645 5.914898 AATCCCAAGTTAAATAGTGCCAC 57.085 39.130 0.00 0.00 0.00 5.01
5982 8646 3.340034 TCCCAAGTTAAATAGTGCCACG 58.660 45.455 0.00 0.00 0.00 4.94
5983 8647 3.078837 CCCAAGTTAAATAGTGCCACGT 58.921 45.455 0.00 0.00 0.00 4.49
5984 8648 3.126343 CCCAAGTTAAATAGTGCCACGTC 59.874 47.826 0.00 0.00 0.00 4.34
5985 8649 3.749088 CCAAGTTAAATAGTGCCACGTCA 59.251 43.478 0.00 0.00 0.00 4.35
5986 8650 4.378046 CCAAGTTAAATAGTGCCACGTCAC 60.378 45.833 0.00 0.00 37.24 3.67
5987 8651 3.332034 AGTTAAATAGTGCCACGTCACC 58.668 45.455 3.92 0.00 37.68 4.02
5988 8652 3.068560 GTTAAATAGTGCCACGTCACCA 58.931 45.455 3.92 0.00 37.68 4.17
5989 8653 1.519408 AAATAGTGCCACGTCACCAC 58.481 50.000 3.92 3.14 37.68 4.16
5990 8654 0.685097 AATAGTGCCACGTCACCACT 59.315 50.000 14.38 14.38 42.10 4.00
5991 8655 0.246635 ATAGTGCCACGTCACCACTC 59.753 55.000 13.61 0.00 40.12 3.51
5992 8656 0.826256 TAGTGCCACGTCACCACTCT 60.826 55.000 13.61 0.00 40.12 3.24
5993 8657 1.227556 GTGCCACGTCACCACTCTT 60.228 57.895 0.00 0.00 0.00 2.85
5994 8658 0.032952 GTGCCACGTCACCACTCTTA 59.967 55.000 0.00 0.00 0.00 2.10
5995 8659 0.032952 TGCCACGTCACCACTCTTAC 59.967 55.000 0.00 0.00 0.00 2.34
5996 8660 0.317479 GCCACGTCACCACTCTTACT 59.683 55.000 0.00 0.00 0.00 2.24
5997 8661 1.935300 GCCACGTCACCACTCTTACTG 60.935 57.143 0.00 0.00 0.00 2.74
5998 8662 1.340248 CCACGTCACCACTCTTACTGT 59.660 52.381 0.00 0.00 0.00 3.55
5999 8663 2.223971 CCACGTCACCACTCTTACTGTT 60.224 50.000 0.00 0.00 0.00 3.16
6000 8664 2.794910 CACGTCACCACTCTTACTGTTG 59.205 50.000 0.00 0.00 0.00 3.33
6001 8665 1.792949 CGTCACCACTCTTACTGTTGC 59.207 52.381 0.00 0.00 0.00 4.17
6002 8666 2.545952 CGTCACCACTCTTACTGTTGCT 60.546 50.000 0.00 0.00 0.00 3.91
6003 8667 3.305131 CGTCACCACTCTTACTGTTGCTA 60.305 47.826 0.00 0.00 0.00 3.49
6004 8668 4.628074 GTCACCACTCTTACTGTTGCTAA 58.372 43.478 0.00 0.00 0.00 3.09
6005 8669 5.238583 GTCACCACTCTTACTGTTGCTAAT 58.761 41.667 0.00 0.00 0.00 1.73
6006 8670 5.348997 GTCACCACTCTTACTGTTGCTAATC 59.651 44.000 0.00 0.00 0.00 1.75
6007 8671 4.631813 CACCACTCTTACTGTTGCTAATCC 59.368 45.833 0.00 0.00 0.00 3.01
6008 8672 4.532521 ACCACTCTTACTGTTGCTAATCCT 59.467 41.667 0.00 0.00 0.00 3.24
6009 8673 5.112686 CCACTCTTACTGTTGCTAATCCTC 58.887 45.833 0.00 0.00 0.00 3.71
6010 8674 4.800993 CACTCTTACTGTTGCTAATCCTCG 59.199 45.833 0.00 0.00 0.00 4.63
6011 8675 4.142138 ACTCTTACTGTTGCTAATCCTCGG 60.142 45.833 0.00 0.00 0.00 4.63
6012 8676 3.767673 TCTTACTGTTGCTAATCCTCGGT 59.232 43.478 0.00 0.00 0.00 4.69
6013 8677 4.222145 TCTTACTGTTGCTAATCCTCGGTT 59.778 41.667 0.00 0.00 0.00 4.44
6014 8678 2.699954 ACTGTTGCTAATCCTCGGTTG 58.300 47.619 0.00 0.00 0.00 3.77
6015 8679 2.301870 ACTGTTGCTAATCCTCGGTTGA 59.698 45.455 0.00 0.00 0.00 3.18
6016 8680 3.055094 ACTGTTGCTAATCCTCGGTTGAT 60.055 43.478 0.00 0.00 0.00 2.57
6017 8681 3.531538 TGTTGCTAATCCTCGGTTGATC 58.468 45.455 0.00 0.00 0.00 2.92
6018 8682 2.872858 GTTGCTAATCCTCGGTTGATCC 59.127 50.000 0.00 0.00 0.00 3.36
6019 8683 2.115427 TGCTAATCCTCGGTTGATCCA 58.885 47.619 0.00 0.00 35.57 3.41
6020 8684 2.503765 TGCTAATCCTCGGTTGATCCAA 59.496 45.455 0.00 0.00 35.57 3.53
6021 8685 3.054728 TGCTAATCCTCGGTTGATCCAAA 60.055 43.478 0.00 0.00 35.57 3.28
6022 8686 4.137543 GCTAATCCTCGGTTGATCCAAAT 58.862 43.478 0.00 0.00 35.57 2.32
6023 8687 4.214332 GCTAATCCTCGGTTGATCCAAATC 59.786 45.833 0.00 0.00 35.57 2.17
6024 8688 2.309528 TCCTCGGTTGATCCAAATCG 57.690 50.000 0.00 0.00 34.39 3.34
6025 8689 0.657840 CCTCGGTTGATCCAAATCGC 59.342 55.000 0.00 0.00 34.39 4.58
6026 8690 1.368641 CTCGGTTGATCCAAATCGCA 58.631 50.000 0.00 0.00 34.39 5.10
6027 8691 1.737236 CTCGGTTGATCCAAATCGCAA 59.263 47.619 0.00 0.00 34.39 4.85
6028 8692 2.355756 CTCGGTTGATCCAAATCGCAAT 59.644 45.455 0.00 0.00 34.39 3.56
6029 8693 2.752354 TCGGTTGATCCAAATCGCAATT 59.248 40.909 0.00 0.00 34.39 2.32
6030 8694 3.108144 CGGTTGATCCAAATCGCAATTC 58.892 45.455 0.00 0.00 34.39 2.17
6031 8695 3.427368 CGGTTGATCCAAATCGCAATTCA 60.427 43.478 0.00 0.00 34.39 2.57
6032 8696 4.493547 GGTTGATCCAAATCGCAATTCAA 58.506 39.130 0.00 0.00 34.39 2.69
6033 8697 4.928615 GGTTGATCCAAATCGCAATTCAAA 59.071 37.500 0.00 0.00 34.39 2.69
6034 8698 5.581874 GGTTGATCCAAATCGCAATTCAAAT 59.418 36.000 0.00 0.00 34.39 2.32
6035 8699 6.092533 GGTTGATCCAAATCGCAATTCAAATT 59.907 34.615 0.00 0.00 34.39 1.82
6036 8700 7.277539 GGTTGATCCAAATCGCAATTCAAATTA 59.722 33.333 0.00 0.00 34.39 1.40
6037 8701 8.655092 GTTGATCCAAATCGCAATTCAAATTAA 58.345 29.630 0.00 0.00 34.39 1.40
6038 8702 8.768957 TGATCCAAATCGCAATTCAAATTAAA 57.231 26.923 0.00 0.00 34.39 1.52
6039 8703 9.212641 TGATCCAAATCGCAATTCAAATTAAAA 57.787 25.926 0.00 0.00 34.39 1.52
6043 8707 9.823098 CCAAATCGCAATTCAAATTAAAATTCA 57.177 25.926 0.00 0.00 0.00 2.57
6066 8730 9.447157 TTCAAATCAAAATCCAAAACTCAAAGT 57.553 25.926 0.00 0.00 0.00 2.66
6067 8731 9.447157 TCAAATCAAAATCCAAAACTCAAAGTT 57.553 25.926 0.00 0.00 40.80 2.66
6082 8746 7.294676 ACTCAAAGTTTTCAAACATGAAAGC 57.705 32.000 0.00 9.29 41.30 3.51
6083 8747 7.099120 ACTCAAAGTTTTCAAACATGAAAGCT 58.901 30.769 12.85 12.85 46.32 3.74
6084 8748 8.250332 ACTCAAAGTTTTCAAACATGAAAGCTA 58.750 29.630 17.17 5.46 44.57 3.32
6085 8749 8.994429 TCAAAGTTTTCAAACATGAAAGCTAA 57.006 26.923 17.17 7.15 44.57 3.09
6086 8750 9.429359 TCAAAGTTTTCAAACATGAAAGCTAAA 57.571 25.926 17.17 6.89 44.57 1.85
6090 8754 9.382275 AGTTTTCAAACATGAAAGCTAAAATGT 57.618 25.926 15.87 0.00 43.90 2.71
6091 8755 9.986833 GTTTTCAAACATGAAAGCTAAAATGTT 57.013 25.926 12.59 12.59 43.28 2.71
6093 8757 8.939201 TTCAAACATGAAAGCTAAAATGTTCA 57.061 26.923 16.64 9.32 41.21 3.18
6094 8758 8.939201 TCAAACATGAAAGCTAAAATGTTCAA 57.061 26.923 16.64 8.73 41.21 2.69
6095 8759 9.376075 TCAAACATGAAAGCTAAAATGTTCAAA 57.624 25.926 16.64 6.99 41.21 2.69
6096 8760 9.424659 CAAACATGAAAGCTAAAATGTTCAAAC 57.575 29.630 16.64 0.00 41.21 2.93
6097 8761 8.947055 AACATGAAAGCTAAAATGTTCAAACT 57.053 26.923 12.59 0.00 38.53 2.66
6098 8762 8.356533 ACATGAAAGCTAAAATGTTCAAACTG 57.643 30.769 0.00 0.00 33.93 3.16
6099 8763 7.981225 ACATGAAAGCTAAAATGTTCAAACTGT 59.019 29.630 0.00 0.00 33.93 3.55
6100 8764 7.754069 TGAAAGCTAAAATGTTCAAACTGTG 57.246 32.000 0.00 0.00 0.00 3.66
6101 8765 6.756074 TGAAAGCTAAAATGTTCAAACTGTGG 59.244 34.615 0.00 0.00 0.00 4.17
6102 8766 6.463995 AAGCTAAAATGTTCAAACTGTGGA 57.536 33.333 0.00 0.00 0.00 4.02
6103 8767 6.463995 AGCTAAAATGTTCAAACTGTGGAA 57.536 33.333 0.00 0.00 0.00 3.53
6104 8768 6.872920 AGCTAAAATGTTCAAACTGTGGAAA 58.127 32.000 0.00 0.00 0.00 3.13
6105 8769 7.327214 AGCTAAAATGTTCAAACTGTGGAAAA 58.673 30.769 0.00 0.00 0.00 2.29
6106 8770 7.986889 AGCTAAAATGTTCAAACTGTGGAAAAT 59.013 29.630 0.00 0.00 0.00 1.82
6107 8771 9.255304 GCTAAAATGTTCAAACTGTGGAAAATA 57.745 29.630 0.24 0.00 0.00 1.40
6112 8776 9.696917 AATGTTCAAACTGTGGAAAATAATCTC 57.303 29.630 0.24 0.00 0.00 2.75
6113 8777 8.463930 TGTTCAAACTGTGGAAAATAATCTCT 57.536 30.769 0.00 0.00 0.00 3.10
6114 8778 8.352201 TGTTCAAACTGTGGAAAATAATCTCTG 58.648 33.333 0.00 0.00 0.00 3.35
6115 8779 7.452880 TCAAACTGTGGAAAATAATCTCTGG 57.547 36.000 0.00 0.00 0.00 3.86
6116 8780 7.004086 TCAAACTGTGGAAAATAATCTCTGGT 58.996 34.615 0.00 0.00 0.00 4.00
6117 8781 7.505585 TCAAACTGTGGAAAATAATCTCTGGTT 59.494 33.333 0.00 0.00 0.00 3.67
6118 8782 8.792633 CAAACTGTGGAAAATAATCTCTGGTTA 58.207 33.333 0.00 0.00 0.00 2.85
6119 8783 9.533831 AAACTGTGGAAAATAATCTCTGGTTAT 57.466 29.630 0.00 0.00 0.00 1.89
6120 8784 9.533831 AACTGTGGAAAATAATCTCTGGTTATT 57.466 29.630 0.00 0.00 34.20 1.40
6121 8785 9.533831 ACTGTGGAAAATAATCTCTGGTTATTT 57.466 29.630 3.53 3.53 41.20 1.40
6123 8787 9.753674 TGTGGAAAATAATCTCTGGTTATTTCT 57.246 29.630 8.44 1.85 39.53 2.52
6125 8789 9.408648 TGGAAAATAATCTCTGGTTATTTCTCC 57.591 33.333 17.87 17.87 39.53 3.71
6126 8790 9.634021 GGAAAATAATCTCTGGTTATTTCTCCT 57.366 33.333 17.67 4.96 39.53 3.69
6128 8792 9.981460 AAAATAATCTCTGGTTATTTCTCCTGT 57.019 29.630 8.44 0.00 39.53 4.00
6129 8793 9.981460 AAATAATCTCTGGTTATTTCTCCTGTT 57.019 29.630 3.53 0.00 37.22 3.16
6130 8794 8.970859 ATAATCTCTGGTTATTTCTCCTGTTG 57.029 34.615 0.00 0.00 0.00 3.33
6131 8795 6.627087 ATCTCTGGTTATTTCTCCTGTTGA 57.373 37.500 0.00 0.00 0.00 3.18
6132 8796 6.433847 TCTCTGGTTATTTCTCCTGTTGAA 57.566 37.500 0.00 0.00 0.00 2.69
6133 8797 6.837312 TCTCTGGTTATTTCTCCTGTTGAAA 58.163 36.000 0.00 0.00 37.74 2.69
6134 8798 6.710744 TCTCTGGTTATTTCTCCTGTTGAAAC 59.289 38.462 0.00 0.00 36.43 2.78
6135 8799 5.768164 TCTGGTTATTTCTCCTGTTGAAACC 59.232 40.000 0.00 0.00 36.43 3.27
6136 8800 5.450453 TGGTTATTTCTCCTGTTGAAACCA 58.550 37.500 0.00 0.00 36.43 3.67
6137 8801 5.894393 TGGTTATTTCTCCTGTTGAAACCAA 59.106 36.000 0.00 0.00 36.43 3.67
6138 8802 6.183360 TGGTTATTTCTCCTGTTGAAACCAAC 60.183 38.462 0.00 0.00 43.10 3.77
6139 8803 4.937201 ATTTCTCCTGTTGAAACCAACC 57.063 40.909 5.93 0.00 42.35 3.77
6140 8804 3.662759 TTCTCCTGTTGAAACCAACCT 57.337 42.857 5.93 0.00 42.35 3.50
6141 8805 3.208747 TCTCCTGTTGAAACCAACCTC 57.791 47.619 5.93 0.00 42.35 3.85
6142 8806 2.777692 TCTCCTGTTGAAACCAACCTCT 59.222 45.455 5.93 0.00 42.35 3.69
6143 8807 3.202151 TCTCCTGTTGAAACCAACCTCTT 59.798 43.478 5.93 0.00 42.35 2.85
6144 8808 3.551846 TCCTGTTGAAACCAACCTCTTC 58.448 45.455 5.93 0.00 42.35 2.87
6145 8809 3.202151 TCCTGTTGAAACCAACCTCTTCT 59.798 43.478 5.93 0.00 42.35 2.85
6146 8810 3.316308 CCTGTTGAAACCAACCTCTTCTG 59.684 47.826 5.93 0.00 42.35 3.02
6147 8811 4.199310 CTGTTGAAACCAACCTCTTCTGA 58.801 43.478 5.93 0.00 42.35 3.27
6148 8812 4.594970 TGTTGAAACCAACCTCTTCTGAA 58.405 39.130 5.93 0.00 42.35 3.02
6149 8813 5.200483 TGTTGAAACCAACCTCTTCTGAAT 58.800 37.500 5.93 0.00 42.35 2.57
6150 8814 5.656416 TGTTGAAACCAACCTCTTCTGAATT 59.344 36.000 5.93 0.00 42.35 2.17
6151 8815 6.183360 TGTTGAAACCAACCTCTTCTGAATTC 60.183 38.462 0.00 0.00 42.35 2.17
6152 8816 4.827284 TGAAACCAACCTCTTCTGAATTCC 59.173 41.667 2.27 0.00 0.00 3.01
6153 8817 3.441500 ACCAACCTCTTCTGAATTCCC 57.558 47.619 2.27 0.00 0.00 3.97
6154 8818 2.716424 ACCAACCTCTTCTGAATTCCCA 59.284 45.455 2.27 0.00 0.00 4.37
6155 8819 3.140144 ACCAACCTCTTCTGAATTCCCAA 59.860 43.478 2.27 0.00 0.00 4.12
6156 8820 4.151883 CCAACCTCTTCTGAATTCCCAAA 58.848 43.478 2.27 0.00 0.00 3.28
6157 8821 4.588528 CCAACCTCTTCTGAATTCCCAAAA 59.411 41.667 2.27 0.00 0.00 2.44
6158 8822 5.070313 CCAACCTCTTCTGAATTCCCAAAAA 59.930 40.000 2.27 0.00 0.00 1.94
6159 8823 6.218746 CAACCTCTTCTGAATTCCCAAAAAG 58.781 40.000 2.27 0.28 0.00 2.27
6160 8824 4.281941 ACCTCTTCTGAATTCCCAAAAAGC 59.718 41.667 2.27 0.00 0.00 3.51
6161 8825 4.322273 CCTCTTCTGAATTCCCAAAAAGCC 60.322 45.833 2.27 0.00 0.00 4.35
6162 8826 3.578282 TCTTCTGAATTCCCAAAAAGCCC 59.422 43.478 2.27 0.00 0.00 5.19
6163 8827 2.256306 TCTGAATTCCCAAAAAGCCCC 58.744 47.619 2.27 0.00 0.00 5.80
6164 8828 2.158173 TCTGAATTCCCAAAAAGCCCCT 60.158 45.455 2.27 0.00 0.00 4.79
6165 8829 1.977129 TGAATTCCCAAAAAGCCCCTG 59.023 47.619 2.27 0.00 0.00 4.45
6166 8830 1.278985 GAATTCCCAAAAAGCCCCTGG 59.721 52.381 0.00 0.00 0.00 4.45
6169 8833 4.637663 CCAAAAAGCCCCTGGGAA 57.362 55.556 16.20 0.00 37.50 3.97
6170 8834 3.087343 CCAAAAAGCCCCTGGGAAT 57.913 52.632 16.20 0.00 37.50 3.01
6171 8835 1.361204 CCAAAAAGCCCCTGGGAATT 58.639 50.000 16.20 5.36 37.50 2.17
6172 8836 2.545810 CCAAAAAGCCCCTGGGAATTA 58.454 47.619 16.20 0.00 37.50 1.40
6173 8837 2.909662 CCAAAAAGCCCCTGGGAATTAA 59.090 45.455 16.20 0.00 37.50 1.40
6174 8838 3.523157 CCAAAAAGCCCCTGGGAATTAAT 59.477 43.478 16.20 0.00 37.50 1.40
6175 8839 4.018506 CCAAAAAGCCCCTGGGAATTAATT 60.019 41.667 16.20 0.00 37.50 1.40
6176 8840 5.516415 CCAAAAAGCCCCTGGGAATTAATTT 60.516 40.000 16.20 4.95 37.50 1.82
6177 8841 5.858876 AAAAGCCCCTGGGAATTAATTTT 57.141 34.783 16.20 8.67 37.50 1.82
6178 8842 5.858876 AAAGCCCCTGGGAATTAATTTTT 57.141 34.783 16.20 0.16 37.50 1.94
6179 8843 4.842531 AGCCCCTGGGAATTAATTTTTG 57.157 40.909 16.20 0.00 37.50 2.44
6180 8844 4.434195 AGCCCCTGGGAATTAATTTTTGA 58.566 39.130 16.20 0.00 37.50 2.69
6181 8845 5.038962 AGCCCCTGGGAATTAATTTTTGAT 58.961 37.500 16.20 0.00 37.50 2.57
6182 8846 5.130975 AGCCCCTGGGAATTAATTTTTGATC 59.869 40.000 16.20 0.00 37.50 2.92
6183 8847 5.687441 GCCCCTGGGAATTAATTTTTGATCC 60.687 44.000 16.20 0.00 37.50 3.36
6184 8848 5.428131 CCCCTGGGAATTAATTTTTGATCCA 59.572 40.000 16.20 3.85 37.50 3.41
6185 8849 6.408434 CCCCTGGGAATTAATTTTTGATCCAG 60.408 42.308 16.20 11.55 39.01 3.86
6186 8850 6.051074 CCTGGGAATTAATTTTTGATCCAGC 58.949 40.000 1.43 0.00 38.24 4.85
6187 8851 6.352051 CCTGGGAATTAATTTTTGATCCAGCA 60.352 38.462 1.43 0.00 38.24 4.41
6188 8852 6.642430 TGGGAATTAATTTTTGATCCAGCAG 58.358 36.000 1.43 0.00 0.00 4.24
6189 8853 5.525012 GGGAATTAATTTTTGATCCAGCAGC 59.475 40.000 1.43 0.00 0.00 5.25
6190 8854 6.108015 GGAATTAATTTTTGATCCAGCAGCA 58.892 36.000 1.43 0.00 0.00 4.41
6191 8855 6.594937 GGAATTAATTTTTGATCCAGCAGCAA 59.405 34.615 1.43 0.00 0.00 3.91
6192 8856 7.119553 GGAATTAATTTTTGATCCAGCAGCAAA 59.880 33.333 1.43 0.00 0.00 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 4.849810 TCTCCTCCCTTGTATTCTTTTGGA 59.150 41.667 0.00 0.00 0.00 3.53
72 73 3.638860 TCCGTTGTATCTCCATGTAGGT 58.361 45.455 0.00 0.00 39.02 3.08
90 91 2.673368 CCTCCATCTCGAACTTTTTCCG 59.327 50.000 0.00 0.00 0.00 4.30
95 96 0.108138 CCGCCTCCATCTCGAACTTT 60.108 55.000 0.00 0.00 0.00 2.66
101 102 1.288439 CATCTCCGCCTCCATCTCG 59.712 63.158 0.00 0.00 0.00 4.04
133 134 1.270732 GCATCTTCGCCTCCATCTCAT 60.271 52.381 0.00 0.00 0.00 2.90
147 148 2.681848 CGAGCATCTTCCTTTGCATCTT 59.318 45.455 0.00 0.00 41.35 2.40
203 204 0.250467 TGCAAGAGAGTGCCACTTCC 60.250 55.000 0.00 0.00 44.26 3.46
275 276 6.146347 GCATCTTCTCGAACTAAGTTCACTTT 59.854 38.462 0.00 0.00 42.05 2.66
286 291 1.661341 GGCATGCATCTTCTCGAACT 58.339 50.000 21.36 0.00 0.00 3.01
302 307 0.036483 TAAGCTTGAGCATGTCGGCA 60.036 50.000 9.86 0.00 45.16 5.69
364 369 2.360852 GGTCATGCCAGCAGTGCT 60.361 61.111 13.14 13.14 40.77 4.40
365 370 2.674033 TGGTCATGCCAGCAGTGC 60.674 61.111 7.13 7.13 43.61 4.40
388 395 6.534634 AGTGTGAGTTTAACCAAGCTATCTT 58.465 36.000 0.00 0.00 0.00 2.40
420 427 0.316937 CGACACACATGCCAACACAC 60.317 55.000 0.00 0.00 0.00 3.82
421 428 1.443322 CCGACACACATGCCAACACA 61.443 55.000 0.00 0.00 0.00 3.72
422 429 1.282570 CCGACACACATGCCAACAC 59.717 57.895 0.00 0.00 0.00 3.32
424 431 1.574428 GACCGACACACATGCCAAC 59.426 57.895 0.00 0.00 0.00 3.77
443 451 1.069703 CATGTTGACGCACTTGACAGG 60.070 52.381 0.00 0.00 0.00 4.00
463 471 2.550606 TCCGCAAAACACCACATAGTTC 59.449 45.455 0.00 0.00 0.00 3.01
480 488 1.078848 AGACAATGCCAGTCTCCGC 60.079 57.895 0.00 0.00 42.40 5.54
499 507 2.620115 GCCATGACATCACCCATAGTTG 59.380 50.000 0.00 0.00 0.00 3.16
509 517 2.732844 TGCCAATAGCCATGACATCA 57.267 45.000 0.00 0.00 42.71 3.07
556 564 9.482627 TTTGTCCGTGCAGAAAATAATTTAAAT 57.517 25.926 0.00 0.00 0.00 1.40
560 568 7.961325 ATTTTGTCCGTGCAGAAAATAATTT 57.039 28.000 0.00 0.00 0.00 1.82
570 578 3.300009 GACTCAAATTTTGTCCGTGCAG 58.700 45.455 8.89 0.51 0.00 4.41
572 580 2.307049 CGACTCAAATTTTGTCCGTGC 58.693 47.619 8.89 0.00 0.00 5.34
574 582 1.265905 GCCGACTCAAATTTTGTCCGT 59.734 47.619 8.89 5.39 0.00 4.69
578 586 0.596082 CCGGCCGACTCAAATTTTGT 59.404 50.000 30.73 0.00 0.00 2.83
582 590 1.241315 CCAACCGGCCGACTCAAATT 61.241 55.000 30.73 5.91 0.00 1.82
588 596 3.698820 GTACCCAACCGGCCGACT 61.699 66.667 30.73 10.45 33.26 4.18
589 597 4.006357 TGTACCCAACCGGCCGAC 62.006 66.667 30.73 15.84 33.26 4.79
604 612 0.809385 CGTCTGTGTAGGATCGGTGT 59.191 55.000 0.00 0.00 0.00 4.16
607 615 1.001268 CATCCGTCTGTGTAGGATCGG 60.001 57.143 0.00 0.00 42.40 4.18
612 620 1.107114 AGCTCATCCGTCTGTGTAGG 58.893 55.000 0.00 0.00 0.00 3.18
614 622 1.472878 GTCAGCTCATCCGTCTGTGTA 59.527 52.381 0.00 0.00 0.00 2.90
619 627 1.134580 CCATTGTCAGCTCATCCGTCT 60.135 52.381 0.00 0.00 0.00 4.18
626 634 3.009363 TCCTTTGATCCATTGTCAGCTCA 59.991 43.478 0.00 0.00 0.00 4.26
627 635 3.614092 TCCTTTGATCCATTGTCAGCTC 58.386 45.455 0.00 0.00 0.00 4.09
631 639 2.027285 TCGCTCCTTTGATCCATTGTCA 60.027 45.455 0.00 0.00 0.00 3.58
637 645 3.338249 CTCTTTTCGCTCCTTTGATCCA 58.662 45.455 0.00 0.00 0.00 3.41
647 655 2.485814 AGCATTTGTCCTCTTTTCGCTC 59.514 45.455 0.00 0.00 0.00 5.03
649 657 2.726066 CGAGCATTTGTCCTCTTTTCGC 60.726 50.000 0.00 0.00 0.00 4.70
657 665 2.436646 CGGGCGAGCATTTGTCCT 60.437 61.111 0.00 0.00 29.47 3.85
658 666 1.862602 AAACGGGCGAGCATTTGTCC 61.863 55.000 0.00 0.00 0.00 4.02
666 674 2.050442 CCAAACAAACGGGCGAGC 60.050 61.111 0.00 0.00 0.00 5.03
667 675 2.642700 CCCAAACAAACGGGCGAG 59.357 61.111 0.00 0.00 35.09 5.03
676 684 1.228003 ATCGTGCCGACCCAAACAA 60.228 52.632 0.00 0.00 39.18 2.83
677 685 1.963855 CATCGTGCCGACCCAAACA 60.964 57.895 0.00 0.00 39.18 2.83
690 698 0.038166 ATTGGCCACAACTCCATCGT 59.962 50.000 3.88 0.00 39.87 3.73
759 767 3.462678 GTGAGAGGCGGGGGAGTC 61.463 72.222 0.00 0.00 0.00 3.36
961 969 0.538516 CGAATCACCCCCACCAACAA 60.539 55.000 0.00 0.00 0.00 2.83
1257 1553 3.935872 CACACACGCACACCACCG 61.936 66.667 0.00 0.00 0.00 4.94
1294 1590 3.763897 GCAACTCCCCTAACATGATGTTT 59.236 43.478 16.75 1.02 41.45 2.83
1335 1638 4.642885 CCCAAACGCCTCCTTTATATTCAA 59.357 41.667 0.00 0.00 0.00 2.69
1683 2042 2.359107 CATGCAGTGCCTCCACGT 60.359 61.111 13.72 0.00 46.62 4.49
2039 3994 2.955402 GTGCTCCGTCACGACTCT 59.045 61.111 0.00 0.00 0.00 3.24
2100 4084 4.412933 CGTCATTACGGCCGTGAT 57.587 55.556 40.02 33.95 45.50 3.06
2217 4201 0.251653 ACAGGAGCCCTAACTCGTCA 60.252 55.000 0.00 0.00 37.57 4.35
2269 4253 2.162681 GCTTATTGCCAACACTCACCT 58.837 47.619 0.00 0.00 35.15 4.00
2360 4628 2.203001 CACACGCACACCACCAGA 60.203 61.111 0.00 0.00 0.00 3.86
2416 4691 0.321671 ACAGCTACATCACGGCAACT 59.678 50.000 0.00 0.00 0.00 3.16
2419 4694 0.670239 CACACAGCTACATCACGGCA 60.670 55.000 0.00 0.00 0.00 5.69
2439 4722 4.097286 GCCAAACGCCTCCTTTATATTCAA 59.903 41.667 0.00 0.00 0.00 2.69
2478 4761 3.509137 GACGACCAACACTCCGGCA 62.509 63.158 0.00 0.00 0.00 5.69
2484 4767 0.178533 TTTTCCCGACGACCAACACT 59.821 50.000 0.00 0.00 0.00 3.55
2486 4769 3.473147 TTTTTCCCGACGACCAACA 57.527 47.368 0.00 0.00 0.00 3.33
2509 4792 1.279271 CGGAGGTGGAAGAAGGAACAT 59.721 52.381 0.00 0.00 0.00 2.71
2512 4795 0.974383 GACGGAGGTGGAAGAAGGAA 59.026 55.000 0.00 0.00 0.00 3.36
2548 4833 2.118404 CAGGTGGTGTTGTTGCCGT 61.118 57.895 0.00 0.00 0.00 5.68
2561 4846 2.031012 TTGACGAGCTGCCAGGTG 59.969 61.111 0.00 0.00 0.00 4.00
2562 4847 2.345244 CTTGACGAGCTGCCAGGT 59.655 61.111 0.00 0.00 0.00 4.00
2628 4913 1.614824 CCTCCCTCCAGGACTGCTT 60.615 63.158 0.00 0.00 40.93 3.91
2810 5095 1.073923 ACCATGAAGGACACAACCCTC 59.926 52.381 0.00 0.00 41.22 4.30
2814 5099 2.293399 GGAACACCATGAAGGACACAAC 59.707 50.000 0.00 0.00 41.22 3.32
2936 5221 9.759473 TTTGGAATAGAAAGAAGGATTTGAGAT 57.241 29.630 0.00 0.00 0.00 2.75
2954 5239 7.482156 TGCACTGCAAGCCAATTTTGGAATA 62.482 40.000 13.50 0.00 42.92 1.75
2962 5247 1.005394 GCTGCACTGCAAGCCAATT 60.005 52.632 4.99 0.00 38.41 2.32
3004 5295 8.672329 TCATGGATATTGGATACCTTCTGAAAT 58.328 33.333 0.00 0.00 0.00 2.17
3010 5301 7.009179 TGACTCATGGATATTGGATACCTTC 57.991 40.000 0.00 0.00 0.00 3.46
3024 5315 8.634335 TGTTTTAATTGAATCTGACTCATGGA 57.366 30.769 0.00 0.00 0.00 3.41
3193 5685 6.879188 ACTTTGTTGTCGGTTTGTTAAATG 57.121 33.333 0.00 0.00 0.00 2.32
3294 5788 6.839134 TCCCTCTGTACAGAAATATAAGAGCA 59.161 38.462 25.14 0.00 36.94 4.26
3309 5835 8.921353 TTGAATATCTAGTACTCCCTCTGTAC 57.079 38.462 0.00 0.00 40.19 2.90
3345 5871 7.310113 GGAGGATCTCGTAAAGATATGATGGTT 60.310 40.741 0.00 0.00 45.06 3.67
3359 5885 3.835978 CTCTAGAGGAGGAGGATCTCGTA 59.164 52.174 12.27 0.00 38.35 3.43
3467 5999 1.881973 GTGCATCCACACACAAGTCAT 59.118 47.619 0.00 0.00 41.67 3.06
3468 6000 1.308047 GTGCATCCACACACAAGTCA 58.692 50.000 0.00 0.00 41.67 3.41
3469 6001 0.593128 GGTGCATCCACACACAAGTC 59.407 55.000 0.00 0.00 43.88 3.01
3470 6002 0.106769 TGGTGCATCCACACACAAGT 60.107 50.000 0.00 0.00 43.88 3.16
3471 6003 2.718094 TGGTGCATCCACACACAAG 58.282 52.632 0.00 0.00 43.88 3.16
3472 6004 4.995594 TGGTGCATCCACACACAA 57.004 50.000 0.00 0.00 43.88 3.33
3483 6024 5.528043 AGTTTGAAACATACATTGGTGCA 57.472 34.783 11.02 0.00 0.00 4.57
3539 6080 2.611292 GTGATGACTTGGATACTGCAGC 59.389 50.000 15.27 0.00 37.61 5.25
3544 6085 9.911788 AAATGATTAAGTGATGACTTGGATACT 57.088 29.630 7.92 0.00 42.66 2.12
3557 6125 6.660521 AGGCATCAAGTGAAATGATTAAGTGA 59.339 34.615 0.00 0.00 35.38 3.41
3560 6128 6.095860 TGGAGGCATCAAGTGAAATGATTAAG 59.904 38.462 0.00 0.00 35.38 1.85
3608 6176 6.455360 AATATTGAGGTGGCAAACATACTG 57.545 37.500 0.00 0.00 0.00 2.74
3618 6186 8.169977 TGAATCAGATTTAATATTGAGGTGGC 57.830 34.615 0.00 0.00 0.00 5.01
3665 6234 0.390472 CTGGACTTGGCTCCGAGAAC 60.390 60.000 10.07 3.20 32.22 3.01
3668 6237 1.544825 TTCCTGGACTTGGCTCCGAG 61.545 60.000 0.00 1.60 32.22 4.63
3669 6238 1.535444 TTCCTGGACTTGGCTCCGA 60.535 57.895 0.00 0.00 32.22 4.55
3706 6275 8.911247 AATTTATACGCCATCTTTTCAAGAAC 57.089 30.769 0.00 0.00 41.63 3.01
3761 6331 8.626526 GTTGATAGTTTTCCCTACAAACTTGAA 58.373 33.333 3.53 0.00 40.83 2.69
3762 6332 7.776030 TGTTGATAGTTTTCCCTACAAACTTGA 59.224 33.333 3.53 0.00 40.83 3.02
3853 6423 9.927668 AGGAAAAACTATCAACAATTACATTGG 57.072 29.630 1.72 0.00 44.42 3.16
3862 6432 9.796120 CAAGTTTGTAGGAAAAACTATCAACAA 57.204 29.630 2.26 0.00 44.93 2.83
3939 6509 2.107950 AGACACTCTCTCCGACTCAG 57.892 55.000 0.00 0.00 0.00 3.35
4069 6649 1.386533 CTGAACAGGCATGTCCCATC 58.613 55.000 3.65 0.00 39.29 3.51
4152 6769 9.661187 CATCAAGAATTATCTGCAGATGTAAAC 57.339 33.333 34.48 21.59 36.51 2.01
4272 6894 7.810282 GTCGCTGACATAGAATACATACTTCAT 59.190 37.037 4.20 0.00 32.09 2.57
4411 7033 6.760770 GGGAAAGATCATAAGAGAACTCACAG 59.239 42.308 4.64 0.00 0.00 3.66
4483 7111 4.078219 AGGGACACCATAGTTCCTGGTATA 60.078 45.833 0.00 0.00 46.00 1.47
4506 7134 0.969149 ACTCACGGATCAAGTGCAGA 59.031 50.000 13.69 0.00 39.31 4.26
4540 7168 4.335315 TGAAACACGAATTCTGAAGTTGCT 59.665 37.500 3.52 0.00 0.00 3.91
4608 7236 3.701205 TCAGCTGTAGCATCTGGAAAA 57.299 42.857 14.67 0.00 45.16 2.29
4652 7281 3.316308 ACTGAAACAGTGCCAGTGAAATC 59.684 43.478 6.52 2.22 43.63 2.17
4794 7435 3.579586 ACCTCAAACAATGCACATGGAAT 59.420 39.130 0.00 0.00 0.00 3.01
4842 7483 0.042581 TGGGAGCTCTACATGTGGGA 59.957 55.000 14.64 5.91 0.00 4.37
4893 7534 3.740397 GCTCCATGCTGTTGCGCA 61.740 61.111 5.66 5.66 45.10 6.09
5087 7731 1.295792 TCACGTTCTCACTTGTTGCC 58.704 50.000 0.00 0.00 0.00 4.52
5252 7897 2.818751 TCCCAAGCGGAATACCAAAT 57.181 45.000 0.00 0.00 37.88 2.32
5264 7910 9.507329 TTCTGATCATATTAAAGTATCCCAAGC 57.493 33.333 0.00 0.00 0.00 4.01
5289 7935 6.238484 GCGATAAAATACCAGAGTCAGCATTT 60.238 38.462 0.00 0.00 0.00 2.32
5298 7944 4.556233 TGATCCGCGATAAAATACCAGAG 58.444 43.478 8.23 0.00 0.00 3.35
5363 8009 3.561143 TCCAAGTTAACAATGTGGCAGT 58.439 40.909 8.61 0.00 0.00 4.40
5377 8023 9.369904 GCAATGTTCATAAATACATTCCAAGTT 57.630 29.630 0.00 0.00 41.65 2.66
5379 8025 7.980662 TGGCAATGTTCATAAATACATTCCAAG 59.019 33.333 0.00 0.00 41.65 3.61
5380 8026 7.845037 TGGCAATGTTCATAAATACATTCCAA 58.155 30.769 0.00 0.00 41.65 3.53
5382 8028 7.491682 ACTGGCAATGTTCATAAATACATTCC 58.508 34.615 0.00 0.00 41.65 3.01
5384 8030 9.153721 CAAACTGGCAATGTTCATAAATACATT 57.846 29.630 0.00 0.00 43.70 2.71
5386 8032 7.095910 CCAAACTGGCAATGTTCATAAATACA 58.904 34.615 0.00 0.00 0.00 2.29
5387 8033 7.096551 ACCAAACTGGCAATGTTCATAAATAC 58.903 34.615 0.00 0.00 42.67 1.89
5391 8037 5.543507 AACCAAACTGGCAATGTTCATAA 57.456 34.783 0.00 0.00 42.67 1.90
5393 8039 5.743636 ATAACCAAACTGGCAATGTTCAT 57.256 34.783 0.00 0.00 42.67 2.57
5399 8045 6.153851 GGTAAAGGTATAACCAAACTGGCAAT 59.846 38.462 0.00 0.00 42.67 3.56
5407 8053 5.523883 AGGCAGGTAAAGGTATAACCAAA 57.476 39.130 0.00 0.00 41.95 3.28
5413 8059 7.440505 TCAACATAAGGCAGGTAAAGGTATA 57.559 36.000 0.00 0.00 0.00 1.47
5467 8113 6.351881 CCTGCATGGTTAGTAAGGAGAACTAA 60.352 42.308 0.00 0.00 37.15 2.24
5468 8114 5.128827 CCTGCATGGTTAGTAAGGAGAACTA 59.871 44.000 0.00 0.00 0.00 2.24
5469 8115 4.080863 CCTGCATGGTTAGTAAGGAGAACT 60.081 45.833 0.00 0.00 0.00 3.01
5470 8116 4.081087 TCCTGCATGGTTAGTAAGGAGAAC 60.081 45.833 0.00 0.00 37.07 3.01
5471 8117 4.101114 TCCTGCATGGTTAGTAAGGAGAA 58.899 43.478 0.00 0.00 37.07 2.87
5472 8118 3.719871 TCCTGCATGGTTAGTAAGGAGA 58.280 45.455 0.00 0.00 37.07 3.71
5473 8119 4.696479 ATCCTGCATGGTTAGTAAGGAG 57.304 45.455 0.00 0.00 37.25 3.69
5474 8120 5.216622 ACTATCCTGCATGGTTAGTAAGGA 58.783 41.667 17.37 5.59 44.97 3.36
5475 8121 5.552870 ACTATCCTGCATGGTTAGTAAGG 57.447 43.478 17.37 0.84 44.97 2.69
5476 8122 6.823689 ACAAACTATCCTGCATGGTTAGTAAG 59.176 38.462 18.39 16.38 45.66 2.34
5477 8123 6.717289 ACAAACTATCCTGCATGGTTAGTAA 58.283 36.000 18.39 0.00 45.66 2.24
5478 8124 6.308015 ACAAACTATCCTGCATGGTTAGTA 57.692 37.500 18.39 0.00 45.66 1.82
5480 8126 6.515272 AAACAAACTATCCTGCATGGTTAG 57.485 37.500 14.05 14.05 41.60 2.34
5481 8127 6.909550 AAAACAAACTATCCTGCATGGTTA 57.090 33.333 0.00 0.00 35.20 2.85
5558 8204 1.100510 CCTGCACACCAATGAGATGG 58.899 55.000 0.00 0.00 46.38 3.51
5560 8206 1.340405 GGACCTGCACACCAATGAGAT 60.340 52.381 0.00 0.00 0.00 2.75
5566 8212 0.323816 TGTTTGGACCTGCACACCAA 60.324 50.000 9.51 9.51 41.12 3.67
5568 8214 0.751643 ACTGTTTGGACCTGCACACC 60.752 55.000 0.00 0.00 0.00 4.16
5638 8285 2.354704 CCAAAAGGAGCATCACCGACTA 60.355 50.000 0.00 0.00 36.25 2.59
5639 8286 1.611673 CCAAAAGGAGCATCACCGACT 60.612 52.381 0.00 0.00 36.25 4.18
5641 8288 0.960364 GCCAAAAGGAGCATCACCGA 60.960 55.000 0.00 0.00 36.25 4.69
5642 8289 1.508088 GCCAAAAGGAGCATCACCG 59.492 57.895 0.00 0.00 36.25 4.94
5644 8291 1.067354 CAAGGCCAAAAGGAGCATCAC 60.067 52.381 5.01 0.00 36.25 3.06
5650 8297 1.703411 TGTTCCAAGGCCAAAAGGAG 58.297 50.000 5.01 0.00 0.00 3.69
5702 8349 6.719370 AGACCAATTGCTAATACTCCAAAACA 59.281 34.615 0.00 0.00 0.00 2.83
5720 8367 4.046286 TGCATAAGGAAACCAGACCAAT 57.954 40.909 0.00 0.00 0.00 3.16
5764 8411 4.764050 TTTCAAGAGACTTGGGTGTACA 57.236 40.909 10.84 0.00 0.00 2.90
5769 8416 2.814336 GCGAATTTCAAGAGACTTGGGT 59.186 45.455 10.84 0.00 0.00 4.51
5787 8434 2.173758 TTGCATAACCCACGAGGCGA 62.174 55.000 0.00 0.00 40.58 5.54
5788 8435 1.095228 ATTGCATAACCCACGAGGCG 61.095 55.000 0.00 0.00 40.58 5.52
5789 8436 1.602377 GTATTGCATAACCCACGAGGC 59.398 52.381 0.00 0.00 40.58 4.70
5790 8437 2.872245 CTGTATTGCATAACCCACGAGG 59.128 50.000 0.00 0.00 43.78 4.63
5791 8438 3.792401 TCTGTATTGCATAACCCACGAG 58.208 45.455 0.00 0.00 0.00 4.18
5793 8440 5.758296 ACTTATCTGTATTGCATAACCCACG 59.242 40.000 0.00 0.00 0.00 4.94
5822 8475 8.474025 CCTAGGGCTCTAATATCATGTTAGAAG 58.526 40.741 0.00 0.50 37.63 2.85
5823 8476 7.956315 ACCTAGGGCTCTAATATCATGTTAGAA 59.044 37.037 14.81 0.00 37.63 2.10
5833 8486 8.827758 GGATAAAGAAACCTAGGGCTCTAATAT 58.172 37.037 14.81 14.47 0.00 1.28
5849 8513 1.198178 GTTGCGCGTGGGATAAAGAAA 59.802 47.619 8.43 0.00 0.00 2.52
5881 8545 3.102097 GCCGGGAAAAGCGATCTG 58.898 61.111 2.18 0.00 0.00 2.90
5895 8559 1.068588 TGGGAATTAGATCAGTCGCCG 59.931 52.381 0.00 0.00 0.00 6.46
5916 8580 1.133407 GTCACAGGAGACCAGATCGAC 59.867 57.143 0.00 0.00 32.36 4.20
5925 8589 4.436998 CCGGCCGTCACAGGAGAC 62.437 72.222 26.12 0.00 35.19 3.36
5931 8595 2.828877 CTTAATTATCCGGCCGTCACA 58.171 47.619 26.12 5.50 0.00 3.58
5932 8596 1.529865 GCTTAATTATCCGGCCGTCAC 59.470 52.381 26.12 0.00 0.00 3.67
5933 8597 1.414919 AGCTTAATTATCCGGCCGTCA 59.585 47.619 26.12 10.90 0.00 4.35
5934 8598 2.165319 AGCTTAATTATCCGGCCGTC 57.835 50.000 26.12 0.00 0.00 4.79
5935 8599 3.975168 ATAGCTTAATTATCCGGCCGT 57.025 42.857 26.12 9.29 0.00 5.68
5936 8600 5.007385 ACTATAGCTTAATTATCCGGCCG 57.993 43.478 21.04 21.04 0.00 6.13
5937 8601 7.656542 GGATTACTATAGCTTAATTATCCGGCC 59.343 40.741 0.00 0.00 0.00 6.13
5938 8602 7.656542 GGGATTACTATAGCTTAATTATCCGGC 59.343 40.741 0.00 0.00 31.87 6.13
5939 8603 8.701895 TGGGATTACTATAGCTTAATTATCCGG 58.298 37.037 0.00 0.00 31.87 5.14
5954 8618 8.499406 TGGCACTATTTAACTTGGGATTACTAT 58.501 33.333 0.00 0.00 0.00 2.12
5955 8619 7.771826 GTGGCACTATTTAACTTGGGATTACTA 59.228 37.037 11.13 0.00 0.00 1.82
5956 8620 6.602009 GTGGCACTATTTAACTTGGGATTACT 59.398 38.462 11.13 0.00 0.00 2.24
5957 8621 6.457799 CGTGGCACTATTTAACTTGGGATTAC 60.458 42.308 16.72 0.00 0.00 1.89
5958 8622 5.587043 CGTGGCACTATTTAACTTGGGATTA 59.413 40.000 16.72 0.00 0.00 1.75
5959 8623 4.398044 CGTGGCACTATTTAACTTGGGATT 59.602 41.667 16.72 0.00 0.00 3.01
5960 8624 3.945285 CGTGGCACTATTTAACTTGGGAT 59.055 43.478 16.72 0.00 0.00 3.85
5961 8625 3.244630 ACGTGGCACTATTTAACTTGGGA 60.245 43.478 16.72 0.00 0.00 4.37
5962 8626 3.078837 ACGTGGCACTATTTAACTTGGG 58.921 45.455 16.72 0.00 0.00 4.12
5963 8627 3.749088 TGACGTGGCACTATTTAACTTGG 59.251 43.478 16.72 0.00 0.00 3.61
5964 8628 4.378046 GGTGACGTGGCACTATTTAACTTG 60.378 45.833 16.72 0.00 38.78 3.16
5965 8629 3.749609 GGTGACGTGGCACTATTTAACTT 59.250 43.478 16.72 0.00 38.78 2.66
5966 8630 3.244284 TGGTGACGTGGCACTATTTAACT 60.244 43.478 16.72 0.00 38.78 2.24
5967 8631 3.068560 TGGTGACGTGGCACTATTTAAC 58.931 45.455 16.72 5.29 38.78 2.01
5968 8632 3.068560 GTGGTGACGTGGCACTATTTAA 58.931 45.455 16.72 0.00 38.78 1.52
5969 8633 2.300723 AGTGGTGACGTGGCACTATTTA 59.699 45.455 16.72 0.00 38.78 1.40
5970 8634 1.071699 AGTGGTGACGTGGCACTATTT 59.928 47.619 16.72 0.00 38.78 1.40
5971 8635 0.685097 AGTGGTGACGTGGCACTATT 59.315 50.000 16.72 0.00 38.78 1.73
5972 8636 0.246635 GAGTGGTGACGTGGCACTAT 59.753 55.000 16.72 3.21 38.78 2.12
5973 8637 0.826256 AGAGTGGTGACGTGGCACTA 60.826 55.000 16.72 0.00 38.78 2.74
5974 8638 1.686325 AAGAGTGGTGACGTGGCACT 61.686 55.000 16.72 2.45 38.78 4.40
5975 8639 0.032952 TAAGAGTGGTGACGTGGCAC 59.967 55.000 7.79 7.79 38.05 5.01
5976 8640 0.032952 GTAAGAGTGGTGACGTGGCA 59.967 55.000 0.00 0.00 0.00 4.92
5977 8641 0.317479 AGTAAGAGTGGTGACGTGGC 59.683 55.000 0.00 0.00 0.00 5.01
5978 8642 1.340248 ACAGTAAGAGTGGTGACGTGG 59.660 52.381 0.00 0.00 0.00 4.94
5979 8643 2.794910 CAACAGTAAGAGTGGTGACGTG 59.205 50.000 0.00 0.00 38.50 4.49
5980 8644 2.802057 GCAACAGTAAGAGTGGTGACGT 60.802 50.000 3.50 0.00 38.50 4.34
5981 8645 1.792949 GCAACAGTAAGAGTGGTGACG 59.207 52.381 3.50 0.00 38.50 4.35
5982 8646 3.113260 AGCAACAGTAAGAGTGGTGAC 57.887 47.619 3.50 0.00 38.50 3.67
5983 8647 4.948341 TTAGCAACAGTAAGAGTGGTGA 57.052 40.909 3.50 0.00 38.50 4.02
5984 8648 4.631813 GGATTAGCAACAGTAAGAGTGGTG 59.368 45.833 0.00 0.00 39.21 4.17
5985 8649 4.532521 AGGATTAGCAACAGTAAGAGTGGT 59.467 41.667 0.00 0.00 0.00 4.16
5986 8650 5.091261 AGGATTAGCAACAGTAAGAGTGG 57.909 43.478 0.00 0.00 0.00 4.00
5987 8651 4.800993 CGAGGATTAGCAACAGTAAGAGTG 59.199 45.833 0.00 0.00 0.00 3.51
5988 8652 4.142138 CCGAGGATTAGCAACAGTAAGAGT 60.142 45.833 0.00 0.00 0.00 3.24
5989 8653 4.142138 ACCGAGGATTAGCAACAGTAAGAG 60.142 45.833 0.00 0.00 0.00 2.85
5990 8654 3.767673 ACCGAGGATTAGCAACAGTAAGA 59.232 43.478 0.00 0.00 0.00 2.10
5991 8655 4.124851 ACCGAGGATTAGCAACAGTAAG 57.875 45.455 0.00 0.00 0.00 2.34
5992 8656 4.020928 TCAACCGAGGATTAGCAACAGTAA 60.021 41.667 0.00 0.00 0.00 2.24
5993 8657 3.512329 TCAACCGAGGATTAGCAACAGTA 59.488 43.478 0.00 0.00 0.00 2.74
5994 8658 2.301870 TCAACCGAGGATTAGCAACAGT 59.698 45.455 0.00 0.00 0.00 3.55
5995 8659 2.972625 TCAACCGAGGATTAGCAACAG 58.027 47.619 0.00 0.00 0.00 3.16
5996 8660 3.531538 GATCAACCGAGGATTAGCAACA 58.468 45.455 0.00 0.00 0.00 3.33
5997 8661 2.872858 GGATCAACCGAGGATTAGCAAC 59.127 50.000 0.00 0.00 0.00 4.17
5998 8662 2.503765 TGGATCAACCGAGGATTAGCAA 59.496 45.455 0.00 0.00 42.61 3.91
5999 8663 2.115427 TGGATCAACCGAGGATTAGCA 58.885 47.619 0.00 0.00 42.61 3.49
6000 8664 2.910688 TGGATCAACCGAGGATTAGC 57.089 50.000 0.00 0.00 42.61 3.09
6001 8665 4.449068 CGATTTGGATCAACCGAGGATTAG 59.551 45.833 0.00 0.00 42.61 1.73
6002 8666 4.377021 CGATTTGGATCAACCGAGGATTA 58.623 43.478 0.00 0.00 42.61 1.75
6003 8667 3.206150 CGATTTGGATCAACCGAGGATT 58.794 45.455 0.00 0.00 42.61 3.01
6004 8668 2.838736 CGATTTGGATCAACCGAGGAT 58.161 47.619 0.00 0.00 42.61 3.24
6005 8669 1.742411 GCGATTTGGATCAACCGAGGA 60.742 52.381 0.00 0.00 42.61 3.71
6006 8670 0.657840 GCGATTTGGATCAACCGAGG 59.342 55.000 0.00 0.00 42.61 4.63
6007 8671 1.368641 TGCGATTTGGATCAACCGAG 58.631 50.000 0.00 0.00 42.61 4.63
6008 8672 1.814793 TTGCGATTTGGATCAACCGA 58.185 45.000 0.00 0.00 42.61 4.69
6009 8673 2.849880 ATTGCGATTTGGATCAACCG 57.150 45.000 0.00 0.00 42.61 4.44
6010 8674 4.108699 TGAATTGCGATTTGGATCAACC 57.891 40.909 0.00 0.00 39.54 3.77
6011 8675 6.651755 ATTTGAATTGCGATTTGGATCAAC 57.348 33.333 0.00 0.00 32.33 3.18
6012 8676 8.768957 TTAATTTGAATTGCGATTTGGATCAA 57.231 26.923 0.00 0.00 32.33 2.57
6013 8677 8.768957 TTTAATTTGAATTGCGATTTGGATCA 57.231 26.923 0.00 0.00 32.33 2.92
6017 8681 9.823098 TGAATTTTAATTTGAATTGCGATTTGG 57.177 25.926 0.00 0.00 0.00 3.28
6040 8704 9.447157 ACTTTGAGTTTTGGATTTTGATTTGAA 57.553 25.926 0.00 0.00 0.00 2.69
6041 8705 9.447157 AACTTTGAGTTTTGGATTTTGATTTGA 57.553 25.926 0.00 0.00 34.11 2.69
6067 8731 9.376075 TGAACATTTTAGCTTTCATGTTTGAAA 57.624 25.926 14.73 1.63 46.88 2.69
6068 8732 8.939201 TGAACATTTTAGCTTTCATGTTTGAA 57.061 26.923 14.73 5.57 39.43 2.69
6069 8733 8.939201 TTGAACATTTTAGCTTTCATGTTTGA 57.061 26.923 14.73 7.26 39.43 2.69
6070 8734 9.424659 GTTTGAACATTTTAGCTTTCATGTTTG 57.575 29.630 14.73 0.00 39.43 2.93
6071 8735 9.382275 AGTTTGAACATTTTAGCTTTCATGTTT 57.618 25.926 14.73 3.77 39.43 2.83
6072 8736 8.819974 CAGTTTGAACATTTTAGCTTTCATGTT 58.180 29.630 13.88 13.88 41.51 2.71
6073 8737 7.981225 ACAGTTTGAACATTTTAGCTTTCATGT 59.019 29.630 0.00 0.00 0.00 3.21
6074 8738 8.270799 CACAGTTTGAACATTTTAGCTTTCATG 58.729 33.333 0.00 0.00 0.00 3.07
6075 8739 7.439056 CCACAGTTTGAACATTTTAGCTTTCAT 59.561 33.333 0.00 0.00 0.00 2.57
6076 8740 6.756074 CCACAGTTTGAACATTTTAGCTTTCA 59.244 34.615 0.00 0.00 0.00 2.69
6077 8741 6.978080 TCCACAGTTTGAACATTTTAGCTTTC 59.022 34.615 0.00 0.00 0.00 2.62
6078 8742 6.872920 TCCACAGTTTGAACATTTTAGCTTT 58.127 32.000 0.00 0.00 0.00 3.51
6079 8743 6.463995 TCCACAGTTTGAACATTTTAGCTT 57.536 33.333 0.00 0.00 0.00 3.74
6080 8744 6.463995 TTCCACAGTTTGAACATTTTAGCT 57.536 33.333 0.00 0.00 0.00 3.32
6081 8745 7.532682 TTTTCCACAGTTTGAACATTTTAGC 57.467 32.000 0.00 0.00 0.00 3.09
6086 8750 9.696917 GAGATTATTTTCCACAGTTTGAACATT 57.303 29.630 0.00 0.00 0.00 2.71
6087 8751 9.082313 AGAGATTATTTTCCACAGTTTGAACAT 57.918 29.630 0.00 0.00 0.00 2.71
6088 8752 8.352201 CAGAGATTATTTTCCACAGTTTGAACA 58.648 33.333 0.00 0.00 0.00 3.18
6089 8753 7.809806 CCAGAGATTATTTTCCACAGTTTGAAC 59.190 37.037 0.00 0.00 0.00 3.18
6090 8754 7.505585 ACCAGAGATTATTTTCCACAGTTTGAA 59.494 33.333 0.00 0.00 0.00 2.69
6091 8755 7.004086 ACCAGAGATTATTTTCCACAGTTTGA 58.996 34.615 0.00 0.00 0.00 2.69
6092 8756 7.219484 ACCAGAGATTATTTTCCACAGTTTG 57.781 36.000 0.00 0.00 0.00 2.93
6093 8757 7.839680 AACCAGAGATTATTTTCCACAGTTT 57.160 32.000 0.00 0.00 0.00 2.66
6094 8758 9.533831 AATAACCAGAGATTATTTTCCACAGTT 57.466 29.630 0.00 0.00 29.77 3.16
6095 8759 9.533831 AAATAACCAGAGATTATTTTCCACAGT 57.466 29.630 0.00 0.00 38.49 3.55
6097 8761 9.753674 AGAAATAACCAGAGATTATTTTCCACA 57.246 29.630 4.67 0.00 40.59 4.17
6099 8763 9.408648 GGAGAAATAACCAGAGATTATTTTCCA 57.591 33.333 16.38 0.00 40.59 3.53
6100 8764 9.634021 AGGAGAAATAACCAGAGATTATTTTCC 57.366 33.333 15.02 15.02 40.59 3.13
6102 8766 9.981460 ACAGGAGAAATAACCAGAGATTATTTT 57.019 29.630 4.67 0.00 40.59 1.82
6103 8767 9.981460 AACAGGAGAAATAACCAGAGATTATTT 57.019 29.630 3.09 3.09 42.29 1.40
6104 8768 9.401058 CAACAGGAGAAATAACCAGAGATTATT 57.599 33.333 0.00 0.00 34.42 1.40
6105 8769 8.772250 TCAACAGGAGAAATAACCAGAGATTAT 58.228 33.333 0.00 0.00 0.00 1.28
6106 8770 8.146053 TCAACAGGAGAAATAACCAGAGATTA 57.854 34.615 0.00 0.00 0.00 1.75
6107 8771 7.020827 TCAACAGGAGAAATAACCAGAGATT 57.979 36.000 0.00 0.00 0.00 2.40
6108 8772 6.627087 TCAACAGGAGAAATAACCAGAGAT 57.373 37.500 0.00 0.00 0.00 2.75
6109 8773 6.433847 TTCAACAGGAGAAATAACCAGAGA 57.566 37.500 0.00 0.00 0.00 3.10
6110 8774 6.072452 GGTTTCAACAGGAGAAATAACCAGAG 60.072 42.308 0.00 0.00 37.33 3.35
6111 8775 5.768164 GGTTTCAACAGGAGAAATAACCAGA 59.232 40.000 0.00 0.00 37.33 3.86
6112 8776 5.534654 TGGTTTCAACAGGAGAAATAACCAG 59.465 40.000 0.00 0.00 37.33 4.00
6113 8777 5.450453 TGGTTTCAACAGGAGAAATAACCA 58.550 37.500 0.00 0.00 37.33 3.67
6114 8778 6.399639 TTGGTTTCAACAGGAGAAATAACC 57.600 37.500 0.00 0.00 37.33 2.85
6128 8792 5.301805 GGAATTCAGAAGAGGTTGGTTTCAA 59.698 40.000 7.93 0.00 0.00 2.69
6129 8793 4.827284 GGAATTCAGAAGAGGTTGGTTTCA 59.173 41.667 7.93 0.00 0.00 2.69
6130 8794 4.218635 GGGAATTCAGAAGAGGTTGGTTTC 59.781 45.833 7.93 0.00 0.00 2.78
6131 8795 4.152647 GGGAATTCAGAAGAGGTTGGTTT 58.847 43.478 7.93 0.00 0.00 3.27
6132 8796 3.140144 TGGGAATTCAGAAGAGGTTGGTT 59.860 43.478 7.93 0.00 0.00 3.67
6133 8797 2.716424 TGGGAATTCAGAAGAGGTTGGT 59.284 45.455 7.93 0.00 0.00 3.67
6134 8798 3.439857 TGGGAATTCAGAAGAGGTTGG 57.560 47.619 7.93 0.00 0.00 3.77
6135 8799 5.789643 TTTTGGGAATTCAGAAGAGGTTG 57.210 39.130 7.93 0.00 0.00 3.77
6136 8800 5.221521 GCTTTTTGGGAATTCAGAAGAGGTT 60.222 40.000 7.93 0.00 0.00 3.50
6137 8801 4.281941 GCTTTTTGGGAATTCAGAAGAGGT 59.718 41.667 7.93 0.00 0.00 3.85
6138 8802 4.322273 GGCTTTTTGGGAATTCAGAAGAGG 60.322 45.833 7.93 0.00 0.00 3.69
6139 8803 4.322273 GGGCTTTTTGGGAATTCAGAAGAG 60.322 45.833 7.93 4.68 0.00 2.85
6140 8804 3.578282 GGGCTTTTTGGGAATTCAGAAGA 59.422 43.478 7.93 0.00 0.00 2.87
6141 8805 3.306989 GGGGCTTTTTGGGAATTCAGAAG 60.307 47.826 7.93 4.79 0.00 2.85
6142 8806 2.637382 GGGGCTTTTTGGGAATTCAGAA 59.363 45.455 7.93 0.00 0.00 3.02
6143 8807 2.158173 AGGGGCTTTTTGGGAATTCAGA 60.158 45.455 7.93 0.00 0.00 3.27
6144 8808 2.027837 CAGGGGCTTTTTGGGAATTCAG 60.028 50.000 7.93 0.00 0.00 3.02
6145 8809 1.977129 CAGGGGCTTTTTGGGAATTCA 59.023 47.619 7.93 0.00 0.00 2.57
6146 8810 1.278985 CCAGGGGCTTTTTGGGAATTC 59.721 52.381 0.00 0.00 0.00 2.17
6147 8811 1.361204 CCAGGGGCTTTTTGGGAATT 58.639 50.000 0.00 0.00 0.00 2.17
6148 8812 3.087343 CCAGGGGCTTTTTGGGAAT 57.913 52.632 0.00 0.00 0.00 3.01
6149 8813 4.637663 CCAGGGGCTTTTTGGGAA 57.362 55.556 0.00 0.00 0.00 3.97
6152 8816 1.361204 AATTCCCAGGGGCTTTTTGG 58.639 50.000 5.33 0.00 34.68 3.28
6153 8817 4.842531 ATTAATTCCCAGGGGCTTTTTG 57.157 40.909 5.33 0.00 34.68 2.44
6154 8818 5.858876 AAATTAATTCCCAGGGGCTTTTT 57.141 34.783 5.33 0.00 34.68 1.94
6155 8819 5.858876 AAAATTAATTCCCAGGGGCTTTT 57.141 34.783 5.33 0.78 34.68 2.27
6156 8820 5.311913 TCAAAAATTAATTCCCAGGGGCTTT 59.688 36.000 5.33 0.00 34.68 3.51
6157 8821 4.849235 TCAAAAATTAATTCCCAGGGGCTT 59.151 37.500 5.33 1.97 34.68 4.35
6158 8822 4.434195 TCAAAAATTAATTCCCAGGGGCT 58.566 39.130 5.33 0.00 34.68 5.19
6159 8823 4.835284 TCAAAAATTAATTCCCAGGGGC 57.165 40.909 5.33 0.00 34.68 5.80
6160 8824 5.428131 TGGATCAAAAATTAATTCCCAGGGG 59.572 40.000 5.33 0.92 0.00 4.79
6161 8825 6.558488 TGGATCAAAAATTAATTCCCAGGG 57.442 37.500 0.00 0.00 0.00 4.45
6162 8826 6.051074 GCTGGATCAAAAATTAATTCCCAGG 58.949 40.000 19.51 5.84 39.10 4.45
6163 8827 6.642430 TGCTGGATCAAAAATTAATTCCCAG 58.358 36.000 16.68 16.68 41.00 4.45
6164 8828 6.617782 TGCTGGATCAAAAATTAATTCCCA 57.382 33.333 0.10 2.58 0.00 4.37
6165 8829 5.525012 GCTGCTGGATCAAAAATTAATTCCC 59.475 40.000 0.10 0.00 0.00 3.97
6166 8830 6.108015 TGCTGCTGGATCAAAAATTAATTCC 58.892 36.000 0.10 0.00 0.00 3.01
6167 8831 7.599630 TTGCTGCTGGATCAAAAATTAATTC 57.400 32.000 0.10 0.00 0.00 2.17
6168 8832 7.982761 TTTGCTGCTGGATCAAAAATTAATT 57.017 28.000 0.00 0.00 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.