Multiple sequence alignment - TraesCS3A01G169900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G169900 chr3A 100.000 4412 0 0 1 4412 178122117 178117706 0.000000e+00 8148.0
1 TraesCS3A01G169900 chr3A 81.765 1020 147 31 2563 3558 8867320 8866316 0.000000e+00 817.0
2 TraesCS3A01G169900 chr3A 94.361 266 14 1 307 572 749476650 749476386 1.480000e-109 407.0
3 TraesCS3A01G169900 chr3A 93.704 270 15 2 304 572 58275082 58274814 1.910000e-108 403.0
4 TraesCS3A01G169900 chr3A 85.000 240 31 5 2311 2547 8867643 8867406 5.700000e-59 239.0
5 TraesCS3A01G169900 chr3A 87.654 81 9 1 111 191 595774375 595774296 4.700000e-15 93.5
6 TraesCS3A01G169900 chr3D 92.126 1651 101 17 1947 3584 152672721 152674355 0.000000e+00 2302.0
7 TraesCS3A01G169900 chr3D 85.952 1381 105 36 570 1919 152671268 152672590 0.000000e+00 1393.0
8 TraesCS3A01G169900 chr3D 90.823 741 33 18 3521 4230 152674333 152675069 0.000000e+00 959.0
9 TraesCS3A01G169900 chr3D 82.634 1048 147 26 2536 3558 772604 773641 0.000000e+00 894.0
10 TraesCS3A01G169900 chr3D 85.551 263 25 8 2262 2514 772256 772515 3.380000e-66 263.0
11 TraesCS3A01G169900 chr3D 89.313 131 14 0 4282 4412 152675090 152675220 9.820000e-37 165.0
12 TraesCS3A01G169900 chr3B 93.495 1399 77 8 2243 3639 223345298 223346684 0.000000e+00 2067.0
13 TraesCS3A01G169900 chr3B 88.953 1720 86 37 570 2243 223343581 223345242 0.000000e+00 2028.0
14 TraesCS3A01G169900 chr3B 82.206 843 116 23 2731 3558 5951531 5952354 0.000000e+00 695.0
15 TraesCS3A01G169900 chr3B 87.778 630 31 12 3645 4232 223349933 223350558 0.000000e+00 695.0
16 TraesCS3A01G169900 chr3B 88.532 218 22 3 2311 2526 5950985 5951201 1.220000e-65 261.0
17 TraesCS3A01G169900 chr5B 94.444 270 14 1 303 572 133590108 133590376 8.830000e-112 414.0
18 TraesCS3A01G169900 chr5B 93.116 276 15 4 306 579 455761956 455761683 6.870000e-108 401.0
19 TraesCS3A01G169900 chr7B 94.677 263 14 0 310 572 17344990 17345252 4.110000e-110 409.0
20 TraesCS3A01G169900 chr4B 93.190 279 17 2 311 588 400363429 400363152 4.110000e-110 409.0
21 TraesCS3A01G169900 chr4A 93.727 271 15 2 310 580 13331167 13331435 5.310000e-109 405.0
22 TraesCS3A01G169900 chr4A 100.000 29 0 0 163 191 466644368 466644396 2.000000e-03 54.7
23 TraesCS3A01G169900 chr7A 93.407 273 17 1 303 575 9210718 9210447 1.910000e-108 403.0
24 TraesCS3A01G169900 chr5A 93.704 270 15 2 304 572 166842950 166843218 1.910000e-108 403.0
25 TraesCS3A01G169900 chr1D 85.870 92 11 2 111 200 50209836 50209927 3.630000e-16 97.1
26 TraesCS3A01G169900 chr6B 87.356 87 6 2 111 192 637490514 637490600 1.310000e-15 95.3
27 TraesCS3A01G169900 chr7D 85.882 85 5 7 122 201 606806775 606806693 2.830000e-12 84.2
28 TraesCS3A01G169900 chr7D 87.879 66 8 0 113 178 75314287 75314352 1.320000e-10 78.7
29 TraesCS3A01G169900 chr6D 95.122 41 1 1 150 190 266954833 266954872 3.680000e-06 63.9
30 TraesCS3A01G169900 chr1B 95.000 40 1 1 154 192 11124060 11124099 1.330000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G169900 chr3A 178117706 178122117 4411 True 8148.000000 8148 100.000000 1 4412 1 chr3A.!!$R2 4411
1 TraesCS3A01G169900 chr3A 8866316 8867643 1327 True 528.000000 817 83.382500 2311 3558 2 chr3A.!!$R5 1247
2 TraesCS3A01G169900 chr3D 152671268 152675220 3952 False 1204.750000 2302 89.553500 570 4412 4 chr3D.!!$F2 3842
3 TraesCS3A01G169900 chr3D 772256 773641 1385 False 578.500000 894 84.092500 2262 3558 2 chr3D.!!$F1 1296
4 TraesCS3A01G169900 chr3B 223343581 223350558 6977 False 1596.666667 2067 90.075333 570 4232 3 chr3B.!!$F2 3662
5 TraesCS3A01G169900 chr3B 5950985 5952354 1369 False 478.000000 695 85.369000 2311 3558 2 chr3B.!!$F1 1247

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
351 352 0.031857 TCTGCACATTGGTTTTGCCG 59.968 50.000 0.00 0.00 41.21 5.69 F
352 353 0.031857 CTGCACATTGGTTTTGCCGA 59.968 50.000 0.00 0.00 41.21 5.54 F
1153 1155 0.318107 ATGCCGAAATATGCGCTTGC 60.318 50.000 9.73 1.15 39.78 4.01 F
1165 1167 0.877649 GCGCTTGCTGCTGCTAGATA 60.878 55.000 26.19 0.00 43.04 1.98 F
1166 1168 1.138337 CGCTTGCTGCTGCTAGATAG 58.862 55.000 26.19 14.44 43.04 2.08 F
1630 1665 1.143073 GAGTGGAATGACCCCATACCC 59.857 57.143 0.00 0.00 35.91 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2149 2294 0.895559 CAACTGGTCCAAAGCCCCTC 60.896 60.000 0.00 0.00 0.00 4.30 R
2174 2319 2.489329 GCAAAGTGCCATGTACTGATGT 59.511 45.455 0.00 0.00 37.42 3.06 R
2817 3205 0.665835 TTGCTGTACCCACTTTTGCG 59.334 50.000 0.00 0.00 0.00 4.85 R
3050 3448 1.374252 AACAGCGGGATGTCGACAC 60.374 57.895 22.71 14.46 31.50 3.67 R
3257 3655 4.163458 ACTGTTCTTTTGTGTCCTCCAGTA 59.837 41.667 0.00 0.00 0.00 2.74 R
3526 3938 2.340210 TCAGCACTTGTGGCAACTAA 57.660 45.000 2.81 0.00 37.61 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 9.790389 TGTCATTAAACTTACATTCAAAAACGT 57.210 25.926 0.00 0.00 0.00 3.99
62 63 3.923827 AAAACGTTTGAAGTTGCATGC 57.076 38.095 15.46 11.82 31.43 4.06
63 64 2.575694 AACGTTTGAAGTTGCATGCA 57.424 40.000 18.46 18.46 0.00 3.96
64 65 1.838913 ACGTTTGAAGTTGCATGCAC 58.161 45.000 22.58 15.59 0.00 4.57
65 66 1.405105 ACGTTTGAAGTTGCATGCACT 59.595 42.857 22.58 17.67 0.00 4.40
66 67 2.046313 CGTTTGAAGTTGCATGCACTC 58.954 47.619 22.58 17.29 0.00 3.51
67 68 2.046313 GTTTGAAGTTGCATGCACTCG 58.954 47.619 22.58 0.00 0.00 4.18
68 69 1.308047 TTGAAGTTGCATGCACTCGT 58.692 45.000 22.58 14.67 0.00 4.18
69 70 2.162319 TGAAGTTGCATGCACTCGTA 57.838 45.000 22.58 1.43 0.00 3.43
70 71 2.698803 TGAAGTTGCATGCACTCGTAT 58.301 42.857 22.58 5.94 0.00 3.06
71 72 3.855858 TGAAGTTGCATGCACTCGTATA 58.144 40.909 22.58 0.00 0.00 1.47
72 73 3.616821 TGAAGTTGCATGCACTCGTATAC 59.383 43.478 22.58 14.19 0.00 1.47
73 74 2.193447 AGTTGCATGCACTCGTATACG 58.807 47.619 22.58 19.23 41.45 3.06
74 75 0.927537 TTGCATGCACTCGTATACGC 59.072 50.000 22.58 6.95 39.60 4.42
75 76 1.206115 TGCATGCACTCGTATACGCG 61.206 55.000 18.46 16.85 39.60 6.01
76 77 1.206745 GCATGCACTCGTATACGCGT 61.207 55.000 19.17 19.17 37.85 6.01
82 83 2.838386 ACTCGTATACGCGTGACATT 57.162 45.000 24.59 3.84 35.84 2.71
83 84 3.141002 ACTCGTATACGCGTGACATTT 57.859 42.857 24.59 3.47 35.84 2.32
84 85 4.277257 ACTCGTATACGCGTGACATTTA 57.723 40.909 24.59 0.00 35.84 1.40
85 86 4.852138 ACTCGTATACGCGTGACATTTAT 58.148 39.130 24.59 7.93 35.84 1.40
86 87 5.276270 ACTCGTATACGCGTGACATTTATT 58.724 37.500 24.59 0.00 35.84 1.40
87 88 6.429624 ACTCGTATACGCGTGACATTTATTA 58.570 36.000 24.59 0.00 35.84 0.98
88 89 6.576313 ACTCGTATACGCGTGACATTTATTAG 59.424 38.462 24.59 9.24 35.84 1.73
89 90 5.852755 TCGTATACGCGTGACATTTATTAGG 59.147 40.000 24.59 4.04 39.60 2.69
90 91 5.852755 CGTATACGCGTGACATTTATTAGGA 59.147 40.000 24.59 0.00 0.00 2.94
91 92 6.525628 CGTATACGCGTGACATTTATTAGGAT 59.474 38.462 24.59 4.16 0.00 3.24
92 93 6.946229 ATACGCGTGACATTTATTAGGATC 57.054 37.500 24.59 0.00 0.00 3.36
93 94 4.056050 ACGCGTGACATTTATTAGGATCC 58.944 43.478 12.93 2.48 0.00 3.36
94 95 4.055360 CGCGTGACATTTATTAGGATCCA 58.945 43.478 15.82 0.00 0.00 3.41
95 96 4.690748 CGCGTGACATTTATTAGGATCCAT 59.309 41.667 15.82 1.70 0.00 3.41
96 97 5.179368 CGCGTGACATTTATTAGGATCCATT 59.821 40.000 15.82 0.01 0.00 3.16
97 98 6.293407 CGCGTGACATTTATTAGGATCCATTT 60.293 38.462 15.82 0.00 0.00 2.32
98 99 7.425606 GCGTGACATTTATTAGGATCCATTTT 58.574 34.615 15.82 0.00 0.00 1.82
99 100 7.920682 GCGTGACATTTATTAGGATCCATTTTT 59.079 33.333 15.82 0.00 0.00 1.94
120 121 6.945938 TTTTTCTCAAATACCTCCGTTTCA 57.054 33.333 0.00 0.00 0.00 2.69
121 122 7.519032 TTTTTCTCAAATACCTCCGTTTCAT 57.481 32.000 0.00 0.00 0.00 2.57
122 123 8.624367 TTTTTCTCAAATACCTCCGTTTCATA 57.376 30.769 0.00 0.00 0.00 2.15
123 124 8.624367 TTTTCTCAAATACCTCCGTTTCATAA 57.376 30.769 0.00 0.00 0.00 1.90
124 125 8.801882 TTTCTCAAATACCTCCGTTTCATAAT 57.198 30.769 0.00 0.00 0.00 1.28
125 126 7.786178 TCTCAAATACCTCCGTTTCATAATG 57.214 36.000 0.00 0.00 0.00 1.90
126 127 7.335627 TCTCAAATACCTCCGTTTCATAATGT 58.664 34.615 0.00 0.00 0.00 2.71
127 128 8.479689 TCTCAAATACCTCCGTTTCATAATGTA 58.520 33.333 0.00 0.00 0.00 2.29
128 129 9.104965 CTCAAATACCTCCGTTTCATAATGTAA 57.895 33.333 0.00 0.00 0.00 2.41
129 130 9.104965 TCAAATACCTCCGTTTCATAATGTAAG 57.895 33.333 0.00 0.00 0.00 2.34
130 131 8.342634 CAAATACCTCCGTTTCATAATGTAAGG 58.657 37.037 0.00 0.00 31.97 2.69
131 132 4.196971 ACCTCCGTTTCATAATGTAAGGC 58.803 43.478 0.00 0.00 30.17 4.35
132 133 3.247648 CCTCCGTTTCATAATGTAAGGCG 59.752 47.826 0.00 0.00 0.00 5.52
133 134 3.864243 TCCGTTTCATAATGTAAGGCGT 58.136 40.909 0.00 0.00 0.00 5.68
134 135 4.255301 TCCGTTTCATAATGTAAGGCGTT 58.745 39.130 0.00 0.00 0.00 4.84
135 136 4.696402 TCCGTTTCATAATGTAAGGCGTTT 59.304 37.500 0.00 0.00 0.00 3.60
136 137 5.181622 TCCGTTTCATAATGTAAGGCGTTTT 59.818 36.000 0.00 0.00 0.00 2.43
137 138 5.859648 CCGTTTCATAATGTAAGGCGTTTTT 59.140 36.000 0.00 0.00 0.00 1.94
176 177 9.778741 AGTGTCAGAAAAAGTCTTACATTATGA 57.221 29.630 0.00 0.00 41.41 2.15
181 182 9.329913 CAGAAAAAGTCTTACATTATGAAACGG 57.670 33.333 0.00 0.00 32.70 4.44
182 183 9.280174 AGAAAAAGTCTTACATTATGAAACGGA 57.720 29.630 0.00 0.00 29.66 4.69
183 184 9.543018 GAAAAAGTCTTACATTATGAAACGGAG 57.457 33.333 0.00 0.00 0.00 4.63
184 185 7.611213 AAAGTCTTACATTATGAAACGGAGG 57.389 36.000 0.00 0.00 0.00 4.30
185 186 5.671493 AGTCTTACATTATGAAACGGAGGG 58.329 41.667 0.00 0.00 0.00 4.30
186 187 5.424252 AGTCTTACATTATGAAACGGAGGGA 59.576 40.000 0.00 0.00 0.00 4.20
187 188 5.753921 GTCTTACATTATGAAACGGAGGGAG 59.246 44.000 0.00 0.00 0.00 4.30
188 189 5.424252 TCTTACATTATGAAACGGAGGGAGT 59.576 40.000 0.00 0.00 0.00 3.85
189 190 6.608405 TCTTACATTATGAAACGGAGGGAGTA 59.392 38.462 0.00 0.00 0.00 2.59
190 191 5.888982 ACATTATGAAACGGAGGGAGTAT 57.111 39.130 0.00 0.00 0.00 2.12
191 192 6.248569 ACATTATGAAACGGAGGGAGTATT 57.751 37.500 0.00 0.00 0.00 1.89
192 193 6.659824 ACATTATGAAACGGAGGGAGTATTT 58.340 36.000 0.00 0.00 0.00 1.40
193 194 7.116736 ACATTATGAAACGGAGGGAGTATTTT 58.883 34.615 0.00 0.00 0.00 1.82
194 195 7.614192 ACATTATGAAACGGAGGGAGTATTTTT 59.386 33.333 0.00 0.00 0.00 1.94
223 224 9.840427 AGGAATTTATTCTATGTGTTTTCAACG 57.160 29.630 2.77 0.00 37.00 4.10
224 225 9.620660 GGAATTTATTCTATGTGTTTTCAACGT 57.379 29.630 2.77 0.00 37.00 3.99
229 230 7.724305 ATTCTATGTGTTTTCAACGTACAGT 57.276 32.000 0.00 0.00 0.00 3.55
230 231 8.821147 ATTCTATGTGTTTTCAACGTACAGTA 57.179 30.769 0.00 0.00 0.00 2.74
231 232 7.627585 TCTATGTGTTTTCAACGTACAGTAC 57.372 36.000 0.00 0.00 0.00 2.73
232 233 7.201835 TCTATGTGTTTTCAACGTACAGTACA 58.798 34.615 11.37 0.00 0.00 2.90
233 234 6.665474 ATGTGTTTTCAACGTACAGTACAA 57.335 33.333 11.37 0.00 0.00 2.41
234 235 6.477669 TGTGTTTTCAACGTACAGTACAAA 57.522 33.333 11.37 1.20 0.00 2.83
235 236 7.074507 TGTGTTTTCAACGTACAGTACAAAT 57.925 32.000 11.37 0.00 0.00 2.32
236 237 7.528307 TGTGTTTTCAACGTACAGTACAAATT 58.472 30.769 11.37 0.00 0.00 1.82
237 238 8.021973 TGTGTTTTCAACGTACAGTACAAATTT 58.978 29.630 11.37 0.00 0.00 1.82
238 239 9.488124 GTGTTTTCAACGTACAGTACAAATTTA 57.512 29.630 11.37 0.00 0.00 1.40
242 243 9.719279 TTTCAACGTACAGTACAAATTTAAAGG 57.281 29.630 11.37 0.00 0.00 3.11
243 244 7.354257 TCAACGTACAGTACAAATTTAAAGGC 58.646 34.615 11.37 0.00 0.00 4.35
244 245 7.227116 TCAACGTACAGTACAAATTTAAAGGCT 59.773 33.333 11.37 0.00 0.00 4.58
245 246 7.500720 ACGTACAGTACAAATTTAAAGGCTT 57.499 32.000 11.37 0.00 0.00 4.35
246 247 8.606040 ACGTACAGTACAAATTTAAAGGCTTA 57.394 30.769 11.37 0.00 0.00 3.09
247 248 9.054922 ACGTACAGTACAAATTTAAAGGCTTAA 57.945 29.630 11.37 0.00 0.00 1.85
248 249 9.321590 CGTACAGTACAAATTTAAAGGCTTAAC 57.678 33.333 11.37 0.00 0.00 2.01
249 250 9.616634 GTACAGTACAAATTTAAAGGCTTAACC 57.383 33.333 0.00 0.00 39.61 2.85
250 251 8.240267 ACAGTACAAATTTAAAGGCTTAACCA 57.760 30.769 0.00 0.00 43.14 3.67
251 252 8.139350 ACAGTACAAATTTAAAGGCTTAACCAC 58.861 33.333 0.00 0.00 43.14 4.16
252 253 8.357402 CAGTACAAATTTAAAGGCTTAACCACT 58.643 33.333 0.00 0.00 43.14 4.00
253 254 8.920174 AGTACAAATTTAAAGGCTTAACCACTT 58.080 29.630 0.00 0.00 43.14 3.16
254 255 9.537192 GTACAAATTTAAAGGCTTAACCACTTT 57.463 29.630 0.00 0.00 43.14 2.66
255 256 8.432110 ACAAATTTAAAGGCTTAACCACTTTG 57.568 30.769 0.00 8.86 43.14 2.77
256 257 7.497579 ACAAATTTAAAGGCTTAACCACTTTGG 59.502 33.333 0.00 0.00 45.02 3.28
257 258 5.538849 TTTAAAGGCTTAACCACTTTGGG 57.461 39.130 0.00 0.00 43.37 4.12
258 259 2.767644 AAGGCTTAACCACTTTGGGT 57.232 45.000 0.00 0.00 43.37 4.51
259 260 1.995376 AGGCTTAACCACTTTGGGTG 58.005 50.000 0.00 0.00 38.40 4.61
268 269 1.938625 CACTTTGGGTGGTTGCTTTG 58.061 50.000 0.00 0.00 41.90 2.77
269 270 0.829990 ACTTTGGGTGGTTGCTTTGG 59.170 50.000 0.00 0.00 0.00 3.28
270 271 0.532640 CTTTGGGTGGTTGCTTTGGC 60.533 55.000 0.00 0.00 39.26 4.52
286 287 4.999939 GCAAACGCTGCCCAACCG 63.000 66.667 0.00 0.00 46.13 4.44
287 288 4.999939 CAAACGCTGCCCAACCGC 63.000 66.667 0.00 0.00 0.00 5.68
304 305 4.104183 CGCCGCCTTTTCCCCCTA 62.104 66.667 0.00 0.00 0.00 3.53
305 306 2.439701 GCCGCCTTTTCCCCCTAC 60.440 66.667 0.00 0.00 0.00 3.18
306 307 2.980177 GCCGCCTTTTCCCCCTACT 61.980 63.158 0.00 0.00 0.00 2.57
307 308 1.689412 CCGCCTTTTCCCCCTACTT 59.311 57.895 0.00 0.00 0.00 2.24
308 309 0.679960 CCGCCTTTTCCCCCTACTTG 60.680 60.000 0.00 0.00 0.00 3.16
309 310 0.679960 CGCCTTTTCCCCCTACTTGG 60.680 60.000 0.00 0.00 0.00 3.61
310 311 0.408309 GCCTTTTCCCCCTACTTGGT 59.592 55.000 0.00 0.00 0.00 3.67
311 312 1.637035 GCCTTTTCCCCCTACTTGGTA 59.363 52.381 0.00 0.00 0.00 3.25
312 313 2.619849 GCCTTTTCCCCCTACTTGGTAC 60.620 54.545 0.00 0.00 0.00 3.34
313 314 2.917600 CCTTTTCCCCCTACTTGGTACT 59.082 50.000 0.00 0.00 0.00 2.73
314 315 3.054582 CCTTTTCCCCCTACTTGGTACTC 60.055 52.174 0.00 0.00 0.00 2.59
315 316 2.259014 TTCCCCCTACTTGGTACTCC 57.741 55.000 0.00 0.00 0.00 3.85
316 317 0.340908 TCCCCCTACTTGGTACTCCC 59.659 60.000 0.00 0.00 0.00 4.30
317 318 0.342313 CCCCCTACTTGGTACTCCCT 59.658 60.000 0.00 0.00 0.00 4.20
318 319 1.691801 CCCCCTACTTGGTACTCCCTC 60.692 61.905 0.00 0.00 0.00 4.30
319 320 1.691801 CCCCTACTTGGTACTCCCTCC 60.692 61.905 0.00 0.00 0.00 4.30
320 321 1.400737 CCTACTTGGTACTCCCTCCG 58.599 60.000 0.00 0.00 0.00 4.63
321 322 1.400737 CTACTTGGTACTCCCTCCGG 58.599 60.000 0.00 0.00 0.00 5.14
322 323 0.706433 TACTTGGTACTCCCTCCGGT 59.294 55.000 0.00 0.00 0.00 5.28
323 324 0.614134 ACTTGGTACTCCCTCCGGTC 60.614 60.000 0.00 0.00 0.00 4.79
324 325 1.305549 TTGGTACTCCCTCCGGTCC 60.306 63.158 0.00 0.00 0.00 4.46
325 326 1.807771 TTGGTACTCCCTCCGGTCCT 61.808 60.000 0.00 0.00 0.00 3.85
326 327 1.001376 GGTACTCCCTCCGGTCCTT 59.999 63.158 0.00 0.00 0.00 3.36
327 328 0.616964 GGTACTCCCTCCGGTCCTTT 60.617 60.000 0.00 0.00 0.00 3.11
328 329 1.273759 GTACTCCCTCCGGTCCTTTT 58.726 55.000 0.00 0.00 0.00 2.27
329 330 1.627329 GTACTCCCTCCGGTCCTTTTT 59.373 52.381 0.00 0.00 0.00 1.94
330 331 2.034436 ACTCCCTCCGGTCCTTTTTA 57.966 50.000 0.00 0.00 0.00 1.52
331 332 1.627329 ACTCCCTCCGGTCCTTTTTAC 59.373 52.381 0.00 0.00 0.00 2.01
332 333 1.907255 CTCCCTCCGGTCCTTTTTACT 59.093 52.381 0.00 0.00 0.00 2.24
333 334 1.904537 TCCCTCCGGTCCTTTTTACTC 59.095 52.381 0.00 0.00 0.00 2.59
334 335 1.907255 CCCTCCGGTCCTTTTTACTCT 59.093 52.381 0.00 0.00 0.00 3.24
335 336 2.354805 CCCTCCGGTCCTTTTTACTCTG 60.355 54.545 0.00 0.00 0.00 3.35
336 337 2.347731 CTCCGGTCCTTTTTACTCTGC 58.652 52.381 0.00 0.00 0.00 4.26
337 338 1.695242 TCCGGTCCTTTTTACTCTGCA 59.305 47.619 0.00 0.00 0.00 4.41
338 339 1.804748 CCGGTCCTTTTTACTCTGCAC 59.195 52.381 0.00 0.00 0.00 4.57
339 340 2.489971 CGGTCCTTTTTACTCTGCACA 58.510 47.619 0.00 0.00 0.00 4.57
340 341 3.074412 CGGTCCTTTTTACTCTGCACAT 58.926 45.455 0.00 0.00 0.00 3.21
341 342 3.502211 CGGTCCTTTTTACTCTGCACATT 59.498 43.478 0.00 0.00 0.00 2.71
342 343 4.613622 CGGTCCTTTTTACTCTGCACATTG 60.614 45.833 0.00 0.00 0.00 2.82
343 344 4.321230 GGTCCTTTTTACTCTGCACATTGG 60.321 45.833 0.00 0.00 0.00 3.16
344 345 4.278419 GTCCTTTTTACTCTGCACATTGGT 59.722 41.667 0.00 0.00 0.00 3.67
345 346 4.892934 TCCTTTTTACTCTGCACATTGGTT 59.107 37.500 0.00 0.00 0.00 3.67
346 347 5.362430 TCCTTTTTACTCTGCACATTGGTTT 59.638 36.000 0.00 0.00 0.00 3.27
347 348 6.048509 CCTTTTTACTCTGCACATTGGTTTT 58.951 36.000 0.00 0.00 0.00 2.43
348 349 6.018832 CCTTTTTACTCTGCACATTGGTTTTG 60.019 38.462 0.00 0.00 0.00 2.44
349 350 2.514205 ACTCTGCACATTGGTTTTGC 57.486 45.000 0.00 0.00 36.76 3.68
350 351 1.069049 ACTCTGCACATTGGTTTTGCC 59.931 47.619 0.00 0.00 35.26 4.52
351 352 0.031857 TCTGCACATTGGTTTTGCCG 59.968 50.000 0.00 0.00 41.21 5.69
352 353 0.031857 CTGCACATTGGTTTTGCCGA 59.968 50.000 0.00 0.00 41.21 5.54
353 354 0.461548 TGCACATTGGTTTTGCCGAA 59.538 45.000 0.00 0.00 41.21 4.30
354 355 1.134699 TGCACATTGGTTTTGCCGAAA 60.135 42.857 0.00 0.00 41.21 3.46
355 356 1.526464 GCACATTGGTTTTGCCGAAAG 59.474 47.619 0.00 0.00 41.21 2.62
356 357 2.820330 CACATTGGTTTTGCCGAAAGT 58.180 42.857 0.00 0.00 41.21 2.66
357 358 2.794350 CACATTGGTTTTGCCGAAAGTC 59.206 45.455 0.00 0.00 41.21 3.01
358 359 2.428890 ACATTGGTTTTGCCGAAAGTCA 59.571 40.909 0.00 0.00 41.21 3.41
359 360 3.118956 ACATTGGTTTTGCCGAAAGTCAA 60.119 39.130 0.00 0.00 41.21 3.18
360 361 3.594603 TTGGTTTTGCCGAAAGTCAAA 57.405 38.095 0.00 0.00 41.21 2.69
361 362 2.882324 TGGTTTTGCCGAAAGTCAAAC 58.118 42.857 0.00 0.00 41.21 2.93
362 363 2.494073 TGGTTTTGCCGAAAGTCAAACT 59.506 40.909 0.00 0.00 41.21 2.66
363 364 3.056465 TGGTTTTGCCGAAAGTCAAACTT 60.056 39.130 0.00 0.00 39.24 2.66
364 365 4.561734 TGGTTTTGCCGAAAGTCAAACTTT 60.562 37.500 4.82 4.82 42.15 2.66
365 366 5.336531 TGGTTTTGCCGAAAGTCAAACTTTA 60.337 36.000 5.13 0.00 42.54 1.85
366 367 7.334486 TGGTTTTGCCGAAAGTCAAACTTTAC 61.334 38.462 5.13 0.00 42.54 2.01
367 368 9.395898 TGGTTTTGCCGAAAGTCAAACTTTACT 62.396 37.037 5.13 0.00 42.54 2.24
530 531 9.443283 GATTAAAGTTGGATGAGATTGATTTCG 57.557 33.333 0.00 0.00 0.00 3.46
531 532 5.824904 AAGTTGGATGAGATTGATTTCGG 57.175 39.130 0.00 0.00 0.00 4.30
532 533 5.102953 AGTTGGATGAGATTGATTTCGGA 57.897 39.130 0.00 0.00 0.00 4.55
533 534 4.878397 AGTTGGATGAGATTGATTTCGGAC 59.122 41.667 0.00 0.00 0.00 4.79
534 535 4.486125 TGGATGAGATTGATTTCGGACA 57.514 40.909 0.00 0.00 0.00 4.02
535 536 4.842574 TGGATGAGATTGATTTCGGACAA 58.157 39.130 0.00 0.00 0.00 3.18
536 537 5.252547 TGGATGAGATTGATTTCGGACAAA 58.747 37.500 0.00 0.00 0.00 2.83
537 538 5.123820 TGGATGAGATTGATTTCGGACAAAC 59.876 40.000 0.00 0.00 0.00 2.93
538 539 5.449177 GGATGAGATTGATTTCGGACAAACC 60.449 44.000 0.00 0.00 0.00 3.27
539 540 4.651778 TGAGATTGATTTCGGACAAACCT 58.348 39.130 0.00 0.00 36.31 3.50
540 541 5.800296 TGAGATTGATTTCGGACAAACCTA 58.200 37.500 0.00 0.00 36.31 3.08
541 542 6.234920 TGAGATTGATTTCGGACAAACCTAA 58.765 36.000 0.00 0.00 36.31 2.69
542 543 6.884295 TGAGATTGATTTCGGACAAACCTAAT 59.116 34.615 0.00 0.00 36.31 1.73
543 544 8.044309 TGAGATTGATTTCGGACAAACCTAATA 58.956 33.333 0.00 0.00 36.31 0.98
544 545 8.980481 AGATTGATTTCGGACAAACCTAATAT 57.020 30.769 0.00 0.00 36.31 1.28
545 546 8.840321 AGATTGATTTCGGACAAACCTAATATG 58.160 33.333 0.00 0.00 36.31 1.78
546 547 7.931578 TTGATTTCGGACAAACCTAATATGT 57.068 32.000 0.00 0.00 36.31 2.29
547 548 9.621629 ATTGATTTCGGACAAACCTAATATGTA 57.378 29.630 0.00 0.00 36.31 2.29
548 549 8.657074 TGATTTCGGACAAACCTAATATGTAG 57.343 34.615 0.00 0.00 36.31 2.74
549 550 8.479689 TGATTTCGGACAAACCTAATATGTAGA 58.520 33.333 0.00 0.00 36.31 2.59
550 551 8.888579 ATTTCGGACAAACCTAATATGTAGAG 57.111 34.615 0.00 0.00 36.31 2.43
551 552 7.414222 TTCGGACAAACCTAATATGTAGAGT 57.586 36.000 0.00 0.00 36.31 3.24
552 553 8.523915 TTCGGACAAACCTAATATGTAGAGTA 57.476 34.615 0.00 0.00 36.31 2.59
553 554 8.523915 TCGGACAAACCTAATATGTAGAGTAA 57.476 34.615 0.00 0.00 36.31 2.24
554 555 8.970020 TCGGACAAACCTAATATGTAGAGTAAA 58.030 33.333 0.00 0.00 36.31 2.01
555 556 9.590451 CGGACAAACCTAATATGTAGAGTAAAA 57.410 33.333 0.00 0.00 36.31 1.52
562 563 8.419442 ACCTAATATGTAGAGTAAAAAGGACCG 58.581 37.037 0.00 0.00 0.00 4.79
563 564 7.871463 CCTAATATGTAGAGTAAAAAGGACCGG 59.129 40.741 0.00 0.00 0.00 5.28
564 565 7.427989 AATATGTAGAGTAAAAAGGACCGGA 57.572 36.000 9.46 0.00 0.00 5.14
565 566 5.952347 ATGTAGAGTAAAAAGGACCGGAT 57.048 39.130 9.46 0.00 0.00 4.18
566 567 5.080969 TGTAGAGTAAAAAGGACCGGATG 57.919 43.478 9.46 0.00 0.00 3.51
567 568 3.629142 AGAGTAAAAAGGACCGGATGG 57.371 47.619 9.46 0.00 42.84 3.51
568 569 3.178865 AGAGTAAAAAGGACCGGATGGA 58.821 45.455 9.46 0.00 39.21 3.41
743 744 1.883275 CCTCGAGATCGCAAGGTATCT 59.117 52.381 15.71 0.00 36.30 1.98
744 745 2.095466 CCTCGAGATCGCAAGGTATCTC 60.095 54.545 15.71 0.00 43.06 2.75
764 765 1.215382 CGCTCACTTGATCACCCGA 59.785 57.895 0.00 0.00 0.00 5.14
827 828 1.202770 CGATTCGGCCCCCTCTTTTAT 60.203 52.381 0.00 0.00 0.00 1.40
828 829 2.748465 CGATTCGGCCCCCTCTTTTATT 60.748 50.000 0.00 0.00 0.00 1.40
830 831 4.466827 GATTCGGCCCCCTCTTTTATTTA 58.533 43.478 0.00 0.00 0.00 1.40
831 832 3.286329 TCGGCCCCCTCTTTTATTTAC 57.714 47.619 0.00 0.00 0.00 2.01
832 833 2.092267 TCGGCCCCCTCTTTTATTTACC 60.092 50.000 0.00 0.00 0.00 2.85
833 834 2.092049 CGGCCCCCTCTTTTATTTACCT 60.092 50.000 0.00 0.00 0.00 3.08
834 835 3.136992 CGGCCCCCTCTTTTATTTACCTA 59.863 47.826 0.00 0.00 0.00 3.08
835 836 4.385532 CGGCCCCCTCTTTTATTTACCTAA 60.386 45.833 0.00 0.00 0.00 2.69
839 840 7.126726 GGCCCCCTCTTTTATTTACCTAAAAAT 59.873 37.037 0.00 0.00 31.94 1.82
875 877 2.578940 TGGTTTCGTATCCCCTCCATTT 59.421 45.455 0.00 0.00 0.00 2.32
887 889 4.017126 CCCCTCCATTTGTTAAACTCTCC 58.983 47.826 0.00 0.00 0.00 3.71
897 899 5.304686 TGTTAAACTCTCCACCTGTGATT 57.695 39.130 0.00 0.00 0.00 2.57
1005 1007 2.930040 GCGAACCGATTTTCAGATGAGA 59.070 45.455 0.00 0.00 0.00 3.27
1153 1155 0.318107 ATGCCGAAATATGCGCTTGC 60.318 50.000 9.73 1.15 39.78 4.01
1162 1164 1.156034 TATGCGCTTGCTGCTGCTAG 61.156 55.000 19.73 19.73 43.20 3.42
1163 1165 2.816958 GCGCTTGCTGCTGCTAGA 60.817 61.111 26.19 8.55 43.04 2.43
1164 1166 2.178890 GCGCTTGCTGCTGCTAGAT 61.179 57.895 26.19 0.00 43.04 1.98
1165 1167 0.877649 GCGCTTGCTGCTGCTAGATA 60.878 55.000 26.19 0.00 43.04 1.98
1166 1168 1.138337 CGCTTGCTGCTGCTAGATAG 58.862 55.000 26.19 14.44 43.04 2.08
1167 1169 1.537776 CGCTTGCTGCTGCTAGATAGT 60.538 52.381 26.19 0.00 43.04 2.12
1168 1170 2.287849 CGCTTGCTGCTGCTAGATAGTA 60.288 50.000 26.19 0.00 43.04 1.82
1169 1171 3.056304 GCTTGCTGCTGCTAGATAGTAC 58.944 50.000 26.19 7.55 43.04 2.73
1170 1172 3.491619 GCTTGCTGCTGCTAGATAGTACA 60.492 47.826 26.19 0.00 43.04 2.90
1222 1224 5.235616 TGTTTTACTCGATTCAGTCACAACC 59.764 40.000 0.00 0.00 0.00 3.77
1224 1226 3.032017 ACTCGATTCAGTCACAACCAG 57.968 47.619 0.00 0.00 0.00 4.00
1246 1251 6.463049 CCAGGGTAGTACAGAATAGAATGTGG 60.463 46.154 2.06 0.00 0.00 4.17
1280 1296 2.267174 ATAGCATGCAAGTAGGCTGG 57.733 50.000 21.98 0.00 38.29 4.85
1302 1318 3.259123 GTCACATCAGCTTTTTGGGGATT 59.741 43.478 0.00 0.00 0.00 3.01
1350 1366 4.747108 CCTCGTCCTAATCAATGTGATCAC 59.253 45.833 19.27 19.27 35.76 3.06
1351 1367 5.452496 CCTCGTCCTAATCAATGTGATCACT 60.452 44.000 25.55 9.43 35.76 3.41
1352 1368 5.351458 TCGTCCTAATCAATGTGATCACTG 58.649 41.667 25.55 16.72 35.76 3.66
1353 1369 5.127031 TCGTCCTAATCAATGTGATCACTGA 59.873 40.000 25.55 21.11 35.76 3.41
1354 1370 5.987953 CGTCCTAATCAATGTGATCACTGAT 59.012 40.000 25.55 22.25 35.76 2.90
1355 1371 6.145209 CGTCCTAATCAATGTGATCACTGATC 59.855 42.308 25.55 11.59 35.76 2.92
1356 1372 6.988580 GTCCTAATCAATGTGATCACTGATCA 59.011 38.462 25.55 16.44 45.35 2.92
1404 1434 2.818432 GTCGTTACTCCCTGAGAACTGA 59.182 50.000 0.00 0.00 33.32 3.41
1422 1452 2.147958 TGACGGCAACACTTGGTAATC 58.852 47.619 0.00 0.00 0.00 1.75
1426 1456 1.202348 GGCAACACTTGGTAATCTGGC 59.798 52.381 0.00 0.00 0.00 4.85
1427 1457 1.885887 GCAACACTTGGTAATCTGGCA 59.114 47.619 0.00 0.00 0.00 4.92
1428 1458 2.095059 GCAACACTTGGTAATCTGGCAG 60.095 50.000 8.58 8.58 0.00 4.85
1449 1479 7.333423 TGGCAGTATTGACTTTAACTATGTGAC 59.667 37.037 0.00 0.00 31.73 3.67
1500 1530 5.745769 GCTCAATTTAGCTTTATGTTGAGGC 59.254 40.000 19.43 12.58 41.55 4.70
1506 1536 3.766545 AGCTTTATGTTGAGGCCAAAGA 58.233 40.909 5.01 0.00 33.49 2.52
1508 1538 3.255642 GCTTTATGTTGAGGCCAAAGACA 59.744 43.478 5.01 4.46 33.49 3.41
1616 1651 3.071479 GCGGTTAAGAAATGTGAGTGGA 58.929 45.455 0.00 0.00 0.00 4.02
1623 1658 3.690460 AGAAATGTGAGTGGAATGACCC 58.310 45.455 0.00 0.00 38.00 4.46
1624 1659 2.514458 AATGTGAGTGGAATGACCCC 57.486 50.000 0.00 0.00 38.00 4.95
1625 1660 1.371467 ATGTGAGTGGAATGACCCCA 58.629 50.000 0.00 0.00 38.00 4.96
1626 1661 1.371467 TGTGAGTGGAATGACCCCAT 58.629 50.000 0.00 0.00 35.91 4.00
1628 1663 2.238646 TGTGAGTGGAATGACCCCATAC 59.761 50.000 0.00 0.00 35.91 2.39
1629 1664 1.843851 TGAGTGGAATGACCCCATACC 59.156 52.381 0.00 0.00 35.91 2.73
1630 1665 1.143073 GAGTGGAATGACCCCATACCC 59.857 57.143 0.00 0.00 35.91 3.69
1681 1722 5.210430 AGGATGGGAAATCATGTGCATTTA 58.790 37.500 0.00 0.00 0.00 1.40
1682 1723 5.842328 AGGATGGGAAATCATGTGCATTTAT 59.158 36.000 0.00 0.00 0.00 1.40
1790 1832 1.559368 CATGCTCAAACCCATGGGAA 58.441 50.000 38.07 17.44 36.16 3.97
1943 2068 8.662141 ACGACGCAAGATTAACTATGTTTTATT 58.338 29.630 0.00 0.00 43.62 1.40
2011 2156 9.237846 GTATTTATCTTAATTTGAAGCCACTGC 57.762 33.333 0.00 0.00 37.95 4.40
2062 2207 7.878477 ATTGTATGTATGCATTGCTTATTGC 57.122 32.000 3.54 4.84 38.12 3.56
2066 2211 8.795513 TGTATGTATGCATTGCTTATTGCTATT 58.204 29.630 3.54 0.00 39.60 1.73
2086 2231 9.890629 TGCTATTATAAATGTCTATGGGATGAC 57.109 33.333 0.00 0.00 0.00 3.06
2101 2246 6.279513 TGGGATGACAAAAATCAATGGTAC 57.720 37.500 0.00 0.00 30.82 3.34
2135 2280 3.893326 TCCCTGGTATGATGCGATATG 57.107 47.619 0.00 0.00 0.00 1.78
2149 2294 7.290118 TGATGCGATATGAATTATGTTTGACG 58.710 34.615 0.00 0.00 0.00 4.35
2236 2382 8.877740 TTGAGCTTCAAACTGCAAAGTATGCC 62.878 42.308 0.00 0.00 43.16 4.40
2250 2452 5.782893 AAGTATGCCTTTTGCTGTTGTAA 57.217 34.783 0.00 0.00 42.00 2.41
2295 2497 6.365970 AGTGAAATTCTACCAGACACTGAT 57.634 37.500 0.00 0.00 36.11 2.90
2305 2507 7.907389 TCTACCAGACACTGATAATTGACTTT 58.093 34.615 0.00 0.00 32.44 2.66
2548 2828 5.200368 TGCATCCTGTTTCCTTTCTTTTC 57.800 39.130 0.00 0.00 0.00 2.29
2559 2850 6.490566 TTCCTTTCTTTTCGCTATGGTTAC 57.509 37.500 0.00 0.00 0.00 2.50
2561 2852 5.642063 TCCTTTCTTTTCGCTATGGTTACTG 59.358 40.000 0.00 0.00 0.00 2.74
2580 2871 8.807118 GGTTACTGAATAGATATGTGATCCAGA 58.193 37.037 0.00 0.00 0.00 3.86
2839 3227 2.558359 GCAAAAGTGGGTACAGCAAGAT 59.442 45.455 0.00 0.00 0.00 2.40
2853 3241 8.202137 GGTACAGCAAGATACTTACATTTCCTA 58.798 37.037 0.00 0.00 0.00 2.94
2876 3266 6.615264 AGCATGCTTATACTTTGTCATCAG 57.385 37.500 16.30 0.00 0.00 2.90
2938 3336 1.358830 CCTTGATCCTGGGCCCTGAT 61.359 60.000 29.21 25.65 0.00 2.90
2996 3394 3.686227 TCTGGCCCCACATATTTCATT 57.314 42.857 0.00 0.00 0.00 2.57
3050 3448 2.213499 GAAGGGATGCACGGTTATCAG 58.787 52.381 0.00 0.00 0.00 2.90
3196 3594 1.570803 AGCTCAGAACAGGATCAGCT 58.429 50.000 0.00 0.00 32.28 4.24
3257 3655 7.172190 CGATATAGTGATCAACAATTCTGGCTT 59.828 37.037 0.00 0.00 0.00 4.35
3270 3668 0.976641 CTGGCTTACTGGAGGACACA 59.023 55.000 0.00 0.00 0.00 3.72
3291 3689 5.522460 CACAAAAGAACAGTTCCGAGAAGTA 59.478 40.000 9.85 0.00 0.00 2.24
3395 3793 1.918868 GCGGGGGTTTTACTTGCTCG 61.919 60.000 0.00 0.00 0.00 5.03
3406 3804 2.393271 ACTTGCTCGGAAGAATCTGG 57.607 50.000 5.15 0.00 41.32 3.86
3422 3820 6.598503 AGAATCTGGTATGATCTTTGCATCA 58.401 36.000 0.00 0.00 37.20 3.07
3514 3926 6.029607 CCATCAAGATTATGGTTTTGTGTCG 58.970 40.000 0.00 0.00 39.30 4.35
3526 3938 4.623595 GGTTTTGTGTCGTGTCATGTTTTT 59.376 37.500 0.00 0.00 0.00 1.94
3625 4084 3.867857 TGCTTGTGTTGTCTCTGTTGTA 58.132 40.909 0.00 0.00 0.00 2.41
3783 7513 9.594478 TTTTGCTTATACGACAAGATCTCAATA 57.406 29.630 0.00 0.00 0.00 1.90
3784 7514 8.803201 TTGCTTATACGACAAGATCTCAATAG 57.197 34.615 0.00 0.00 0.00 1.73
3875 7613 4.012374 ACACTTGAATGTAAGGATGCAGG 58.988 43.478 0.00 0.00 31.94 4.85
3909 7647 8.795786 TCCGCATTTATCATTTTTACATTAGC 57.204 30.769 0.00 0.00 0.00 3.09
3958 7696 1.586154 ATTTTTGGCCTCGCAGACGG 61.586 55.000 3.32 0.00 40.63 4.79
3977 7715 2.786495 CGTCCGCCTGCATCCTACT 61.786 63.158 0.00 0.00 0.00 2.57
4055 7793 8.706492 TGTTTATACATCTACGGGTTTAGTTG 57.294 34.615 0.00 0.00 0.00 3.16
4060 7798 0.393402 CTACGGGTTTAGTTGCCCCC 60.393 60.000 0.00 0.00 41.85 5.40
4061 7799 1.132554 TACGGGTTTAGTTGCCCCCA 61.133 55.000 0.00 0.00 41.85 4.96
4063 7801 1.035385 CGGGTTTAGTTGCCCCCATC 61.035 60.000 0.00 0.00 41.85 3.51
4164 7908 9.001049 CATTGACAATCAAAACAAAACAACATG 57.999 29.630 0.00 0.00 40.12 3.21
4170 7914 9.570488 CAATCAAAACAAAACAACATGGAAATT 57.430 25.926 0.00 0.00 0.00 1.82
4232 7976 2.964464 TGGTGACAGGCAAATGACATTT 59.036 40.909 7.62 7.62 35.01 2.32
4234 7978 5.714796 TGGTGACAGGCAAATGACATTTGT 61.715 41.667 31.46 19.04 42.84 2.83
4235 7979 7.138431 TGGTGACAGGCAAATGACATTTGTT 62.138 40.000 31.46 21.54 42.84 2.83
4236 7980 8.529598 TGGTGACAGGCAAATGACATTTGTTT 62.530 38.462 31.46 21.26 42.84 2.83
4237 7981 9.249280 TGGTGACAGGCAAATGACATTTGTTTA 62.249 37.037 31.46 15.87 42.84 2.01
4250 7994 8.603983 TGACATTTGTTTAAAGTTTACGTGAC 57.396 30.769 0.00 0.00 0.00 3.67
4251 7995 8.452534 TGACATTTGTTTAAAGTTTACGTGACT 58.547 29.630 0.00 0.00 0.00 3.41
4252 7996 8.609478 ACATTTGTTTAAAGTTTACGTGACTG 57.391 30.769 0.00 0.00 0.00 3.51
4253 7997 8.452534 ACATTTGTTTAAAGTTTACGTGACTGA 58.547 29.630 0.00 0.00 0.00 3.41
4254 7998 9.279904 CATTTGTTTAAAGTTTACGTGACTGAA 57.720 29.630 0.00 0.00 0.00 3.02
4256 8000 8.829514 TTGTTTAAAGTTTACGTGACTGAATG 57.170 30.769 0.00 0.00 0.00 2.67
4257 8001 8.199176 TGTTTAAAGTTTACGTGACTGAATGA 57.801 30.769 0.00 0.00 0.00 2.57
4258 8002 8.666573 TGTTTAAAGTTTACGTGACTGAATGAA 58.333 29.630 0.00 0.00 0.00 2.57
4259 8003 9.493206 GTTTAAAGTTTACGTGACTGAATGAAA 57.507 29.630 0.00 0.00 0.00 2.69
4260 8004 9.710979 TTTAAAGTTTACGTGACTGAATGAAAG 57.289 29.630 0.00 0.00 0.00 2.62
4261 8005 7.548196 AAAGTTTACGTGACTGAATGAAAGA 57.452 32.000 0.00 0.00 0.00 2.52
4262 8006 7.548196 AAGTTTACGTGACTGAATGAAAGAA 57.452 32.000 0.00 0.00 0.00 2.52
4263 8007 7.548196 AGTTTACGTGACTGAATGAAAGAAA 57.452 32.000 0.00 0.00 0.00 2.52
4264 8008 7.407337 AGTTTACGTGACTGAATGAAAGAAAC 58.593 34.615 0.00 0.00 0.00 2.78
4265 8009 6.912203 TTACGTGACTGAATGAAAGAAACA 57.088 33.333 0.00 0.00 0.00 2.83
4266 8010 7.490962 TTACGTGACTGAATGAAAGAAACAT 57.509 32.000 0.00 0.00 0.00 2.71
4267 8011 8.596271 TTACGTGACTGAATGAAAGAAACATA 57.404 30.769 0.00 0.00 0.00 2.29
4268 8012 7.490962 ACGTGACTGAATGAAAGAAACATAA 57.509 32.000 0.00 0.00 0.00 1.90
4269 8013 7.576236 ACGTGACTGAATGAAAGAAACATAAG 58.424 34.615 0.00 0.00 0.00 1.73
4270 8014 7.017645 CGTGACTGAATGAAAGAAACATAAGG 58.982 38.462 0.00 0.00 0.00 2.69
4271 8015 6.803807 GTGACTGAATGAAAGAAACATAAGGC 59.196 38.462 0.00 0.00 0.00 4.35
4272 8016 5.942872 ACTGAATGAAAGAAACATAAGGCG 58.057 37.500 0.00 0.00 0.00 5.52
4273 8017 5.473504 ACTGAATGAAAGAAACATAAGGCGT 59.526 36.000 0.00 0.00 0.00 5.68
4274 8018 6.016276 ACTGAATGAAAGAAACATAAGGCGTT 60.016 34.615 0.00 0.00 0.00 4.84
4275 8019 7.174253 ACTGAATGAAAGAAACATAAGGCGTTA 59.826 33.333 0.64 0.64 0.00 3.18
4276 8020 7.877003 TGAATGAAAGAAACATAAGGCGTTAA 58.123 30.769 2.52 0.00 0.00 2.01
4277 8021 8.020819 TGAATGAAAGAAACATAAGGCGTTAAG 58.979 33.333 2.52 1.26 0.00 1.85
4278 8022 6.870971 TGAAAGAAACATAAGGCGTTAAGT 57.129 33.333 2.52 1.94 0.00 2.24
4279 8023 7.266922 TGAAAGAAACATAAGGCGTTAAGTT 57.733 32.000 12.55 12.55 32.67 2.66
4280 8024 7.708998 TGAAAGAAACATAAGGCGTTAAGTTT 58.291 30.769 24.34 24.34 40.84 2.66
4288 8032 3.746045 AGGCGTTAAGTTTGAGTGAGA 57.254 42.857 0.00 0.00 0.00 3.27
4332 8076 7.270579 GTCTAAATATTCAAAGTTTGCGTGACC 59.729 37.037 10.90 0.00 0.00 4.02
4338 8082 1.588674 AAGTTTGCGTGACCGAATGA 58.411 45.000 0.00 0.00 35.63 2.57
4345 8089 2.614520 TGCGTGACCGAATGAAAGAAAA 59.385 40.909 0.00 0.00 35.63 2.29
4373 8117 8.617761 AAAGCGTTACGTTTTTAGAAAATTCA 57.382 26.923 13.38 0.00 36.99 2.57
4397 8141 6.525121 TTTAAGACATGTCGACAAAGAGTG 57.475 37.500 24.13 17.87 34.09 3.51
4405 8149 3.570975 TGTCGACAAAGAGTGCTTACCTA 59.429 43.478 17.62 0.00 32.98 3.08
4407 8151 3.825014 TCGACAAAGAGTGCTTACCTACT 59.175 43.478 0.00 0.00 32.98 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 9.790389 ACGTTTTTGAATGTAAGTTTAATGACA 57.210 25.926 0.00 0.00 0.00 3.58
40 41 4.021169 GCATGCAACTTCAAACGTTTTTG 58.979 39.130 14.21 14.08 43.17 2.44
41 42 3.681897 TGCATGCAACTTCAAACGTTTTT 59.318 34.783 20.30 0.00 0.00 1.94
42 43 3.061965 GTGCATGCAACTTCAAACGTTTT 59.938 39.130 24.58 0.00 0.00 2.43
43 44 2.602660 GTGCATGCAACTTCAAACGTTT 59.397 40.909 24.58 7.96 0.00 3.60
44 45 2.159254 AGTGCATGCAACTTCAAACGTT 60.159 40.909 24.58 0.00 0.00 3.99
45 46 1.405105 AGTGCATGCAACTTCAAACGT 59.595 42.857 24.58 0.00 0.00 3.99
46 47 2.046313 GAGTGCATGCAACTTCAAACG 58.954 47.619 24.58 0.00 0.00 3.60
47 48 2.046313 CGAGTGCATGCAACTTCAAAC 58.954 47.619 24.58 7.30 0.00 2.93
48 49 1.675483 ACGAGTGCATGCAACTTCAAA 59.325 42.857 24.58 0.00 0.00 2.69
49 50 1.308047 ACGAGTGCATGCAACTTCAA 58.692 45.000 24.58 0.00 0.00 2.69
50 51 2.162319 TACGAGTGCATGCAACTTCA 57.838 45.000 24.58 5.13 0.00 3.02
51 52 3.301835 CGTATACGAGTGCATGCAACTTC 60.302 47.826 24.58 18.48 43.02 3.01
52 53 2.603110 CGTATACGAGTGCATGCAACTT 59.397 45.455 24.58 15.20 43.02 2.66
53 54 2.193447 CGTATACGAGTGCATGCAACT 58.807 47.619 24.58 20.99 43.02 3.16
54 55 1.332028 GCGTATACGAGTGCATGCAAC 60.332 52.381 28.66 18.10 43.02 4.17
55 56 0.927537 GCGTATACGAGTGCATGCAA 59.072 50.000 28.66 6.73 43.02 4.08
56 57 1.206115 CGCGTATACGAGTGCATGCA 61.206 55.000 28.66 18.46 43.02 3.96
57 58 1.482955 CGCGTATACGAGTGCATGC 59.517 57.895 28.66 11.82 43.02 4.06
64 65 5.801176 AATAAATGTCACGCGTATACGAG 57.199 39.130 28.66 26.56 44.60 4.18
65 66 5.852755 CCTAATAAATGTCACGCGTATACGA 59.147 40.000 28.66 1.03 43.02 3.43
66 67 5.852755 TCCTAATAAATGTCACGCGTATACG 59.147 40.000 20.87 20.87 43.27 3.06
67 68 7.008992 GGATCCTAATAAATGTCACGCGTATAC 59.991 40.741 13.44 14.44 0.00 1.47
68 69 7.031372 GGATCCTAATAAATGTCACGCGTATA 58.969 38.462 13.44 0.00 0.00 1.47
69 70 5.867716 GGATCCTAATAAATGTCACGCGTAT 59.132 40.000 13.44 0.00 0.00 3.06
70 71 5.221283 TGGATCCTAATAAATGTCACGCGTA 60.221 40.000 13.44 0.00 0.00 4.42
71 72 4.056050 GGATCCTAATAAATGTCACGCGT 58.944 43.478 5.58 5.58 0.00 6.01
72 73 4.055360 TGGATCCTAATAAATGTCACGCG 58.945 43.478 14.23 3.53 0.00 6.01
73 74 6.560253 AATGGATCCTAATAAATGTCACGC 57.440 37.500 14.23 0.00 0.00 5.34
97 98 6.945938 TGAAACGGAGGTATTTGAGAAAAA 57.054 33.333 0.00 0.00 0.00 1.94
98 99 8.624367 TTATGAAACGGAGGTATTTGAGAAAA 57.376 30.769 0.00 0.00 0.00 2.29
99 100 8.673711 CATTATGAAACGGAGGTATTTGAGAAA 58.326 33.333 0.00 0.00 0.00 2.52
100 101 7.827236 ACATTATGAAACGGAGGTATTTGAGAA 59.173 33.333 0.00 0.00 0.00 2.87
101 102 7.335627 ACATTATGAAACGGAGGTATTTGAGA 58.664 34.615 0.00 0.00 0.00 3.27
102 103 7.553881 ACATTATGAAACGGAGGTATTTGAG 57.446 36.000 0.00 0.00 0.00 3.02
103 104 9.104965 CTTACATTATGAAACGGAGGTATTTGA 57.895 33.333 0.00 0.00 0.00 2.69
104 105 8.342634 CCTTACATTATGAAACGGAGGTATTTG 58.657 37.037 0.00 0.00 0.00 2.32
105 106 7.012989 GCCTTACATTATGAAACGGAGGTATTT 59.987 37.037 0.00 0.00 0.00 1.40
106 107 6.485648 GCCTTACATTATGAAACGGAGGTATT 59.514 38.462 0.00 0.00 0.00 1.89
107 108 5.995897 GCCTTACATTATGAAACGGAGGTAT 59.004 40.000 0.00 0.00 0.00 2.73
108 109 5.362263 GCCTTACATTATGAAACGGAGGTA 58.638 41.667 0.00 0.00 0.00 3.08
109 110 4.196971 GCCTTACATTATGAAACGGAGGT 58.803 43.478 0.00 0.00 0.00 3.85
110 111 3.247648 CGCCTTACATTATGAAACGGAGG 59.752 47.826 0.00 0.00 0.00 4.30
111 112 3.869246 ACGCCTTACATTATGAAACGGAG 59.131 43.478 0.00 0.00 0.00 4.63
112 113 3.864243 ACGCCTTACATTATGAAACGGA 58.136 40.909 0.00 0.00 0.00 4.69
113 114 4.609691 AACGCCTTACATTATGAAACGG 57.390 40.909 0.00 0.00 0.00 4.44
114 115 6.921332 AAAAACGCCTTACATTATGAAACG 57.079 33.333 0.00 0.00 0.00 3.60
155 156 9.329913 CCGTTTCATAATGTAAGACTTTTTCTG 57.670 33.333 0.00 0.00 33.46 3.02
156 157 9.280174 TCCGTTTCATAATGTAAGACTTTTTCT 57.720 29.630 0.00 0.00 35.32 2.52
157 158 9.543018 CTCCGTTTCATAATGTAAGACTTTTTC 57.457 33.333 0.00 0.00 0.00 2.29
158 159 8.512138 CCTCCGTTTCATAATGTAAGACTTTTT 58.488 33.333 0.00 0.00 0.00 1.94
159 160 7.120726 CCCTCCGTTTCATAATGTAAGACTTTT 59.879 37.037 0.00 0.00 0.00 2.27
160 161 6.598064 CCCTCCGTTTCATAATGTAAGACTTT 59.402 38.462 0.00 0.00 0.00 2.66
161 162 6.070424 TCCCTCCGTTTCATAATGTAAGACTT 60.070 38.462 0.00 0.00 0.00 3.01
162 163 5.424252 TCCCTCCGTTTCATAATGTAAGACT 59.576 40.000 0.00 0.00 0.00 3.24
163 164 5.667466 TCCCTCCGTTTCATAATGTAAGAC 58.333 41.667 0.00 0.00 0.00 3.01
164 165 5.424252 ACTCCCTCCGTTTCATAATGTAAGA 59.576 40.000 0.00 0.00 0.00 2.10
165 166 5.671493 ACTCCCTCCGTTTCATAATGTAAG 58.329 41.667 0.00 0.00 0.00 2.34
166 167 5.687166 ACTCCCTCCGTTTCATAATGTAA 57.313 39.130 0.00 0.00 0.00 2.41
167 168 6.989155 ATACTCCCTCCGTTTCATAATGTA 57.011 37.500 0.00 0.00 0.00 2.29
168 169 5.888982 ATACTCCCTCCGTTTCATAATGT 57.111 39.130 0.00 0.00 0.00 2.71
169 170 7.568199 AAAATACTCCCTCCGTTTCATAATG 57.432 36.000 0.00 0.00 0.00 1.90
216 217 9.719279 CCTTTAAATTTGTACTGTACGTTGAAA 57.281 29.630 12.87 11.25 0.00 2.69
217 218 7.856894 GCCTTTAAATTTGTACTGTACGTTGAA 59.143 33.333 12.87 5.22 0.00 2.69
218 219 7.227116 AGCCTTTAAATTTGTACTGTACGTTGA 59.773 33.333 12.87 0.00 0.00 3.18
219 220 7.357303 AGCCTTTAAATTTGTACTGTACGTTG 58.643 34.615 12.87 0.00 0.00 4.10
220 221 7.500720 AGCCTTTAAATTTGTACTGTACGTT 57.499 32.000 12.87 5.56 0.00 3.99
221 222 7.500720 AAGCCTTTAAATTTGTACTGTACGT 57.499 32.000 12.87 0.00 0.00 3.57
222 223 9.321590 GTTAAGCCTTTAAATTTGTACTGTACG 57.678 33.333 12.87 0.00 30.92 3.67
223 224 9.616634 GGTTAAGCCTTTAAATTTGTACTGTAC 57.383 33.333 10.98 10.98 30.92 2.90
224 225 9.352191 TGGTTAAGCCTTTAAATTTGTACTGTA 57.648 29.630 0.00 0.00 38.35 2.74
225 226 8.139350 GTGGTTAAGCCTTTAAATTTGTACTGT 58.861 33.333 0.00 0.00 38.35 3.55
226 227 8.357402 AGTGGTTAAGCCTTTAAATTTGTACTG 58.643 33.333 0.00 0.00 38.35 2.74
227 228 8.473358 AGTGGTTAAGCCTTTAAATTTGTACT 57.527 30.769 0.00 0.00 38.35 2.73
228 229 9.537192 AAAGTGGTTAAGCCTTTAAATTTGTAC 57.463 29.630 15.17 0.00 38.35 2.90
229 230 9.535878 CAAAGTGGTTAAGCCTTTAAATTTGTA 57.464 29.630 15.89 0.00 38.35 2.41
230 231 7.497579 CCAAAGTGGTTAAGCCTTTAAATTTGT 59.502 33.333 15.89 0.00 38.35 2.83
231 232 7.041440 CCCAAAGTGGTTAAGCCTTTAAATTTG 60.041 37.037 15.89 11.79 35.17 2.32
232 233 6.995686 CCCAAAGTGGTTAAGCCTTTAAATTT 59.004 34.615 15.89 0.00 35.17 1.82
233 234 6.100569 ACCCAAAGTGGTTAAGCCTTTAAATT 59.899 34.615 15.89 0.00 33.91 1.82
234 235 5.605069 ACCCAAAGTGGTTAAGCCTTTAAAT 59.395 36.000 15.89 6.44 33.91 1.40
235 236 4.963628 ACCCAAAGTGGTTAAGCCTTTAAA 59.036 37.500 15.89 0.00 33.91 1.52
236 237 4.342665 CACCCAAAGTGGTTAAGCCTTTAA 59.657 41.667 15.89 0.00 43.26 1.52
237 238 3.892588 CACCCAAAGTGGTTAAGCCTTTA 59.107 43.478 15.89 0.00 43.26 1.85
238 239 2.698274 CACCCAAAGTGGTTAAGCCTTT 59.302 45.455 12.49 12.49 43.26 3.11
239 240 2.316108 CACCCAAAGTGGTTAAGCCTT 58.684 47.619 1.51 2.68 43.26 4.35
240 241 1.995376 CACCCAAAGTGGTTAAGCCT 58.005 50.000 1.51 0.00 43.26 4.58
249 250 1.473080 CCAAAGCAACCACCCAAAGTG 60.473 52.381 0.00 0.00 46.83 3.16
250 251 0.829990 CCAAAGCAACCACCCAAAGT 59.170 50.000 0.00 0.00 0.00 2.66
251 252 0.532640 GCCAAAGCAACCACCCAAAG 60.533 55.000 0.00 0.00 39.53 2.77
252 253 1.524482 GCCAAAGCAACCACCCAAA 59.476 52.632 0.00 0.00 39.53 3.28
253 254 3.225235 GCCAAAGCAACCACCCAA 58.775 55.556 0.00 0.00 39.53 4.12
287 288 4.104183 TAGGGGGAAAAGGCGGCG 62.104 66.667 0.51 0.51 0.00 6.46
288 289 2.439701 GTAGGGGGAAAAGGCGGC 60.440 66.667 0.00 0.00 0.00 6.53
289 290 0.679960 CAAGTAGGGGGAAAAGGCGG 60.680 60.000 0.00 0.00 0.00 6.13
290 291 0.679960 CCAAGTAGGGGGAAAAGGCG 60.680 60.000 0.00 0.00 0.00 5.52
291 292 0.408309 ACCAAGTAGGGGGAAAAGGC 59.592 55.000 0.00 0.00 43.89 4.35
292 293 2.917600 AGTACCAAGTAGGGGGAAAAGG 59.082 50.000 0.00 0.00 43.89 3.11
293 294 3.054582 GGAGTACCAAGTAGGGGGAAAAG 60.055 52.174 0.00 0.00 43.89 2.27
294 295 2.914941 GGAGTACCAAGTAGGGGGAAAA 59.085 50.000 0.00 0.00 43.89 2.29
295 296 2.554563 GGAGTACCAAGTAGGGGGAAA 58.445 52.381 0.00 0.00 43.89 3.13
296 297 1.274011 GGGAGTACCAAGTAGGGGGAA 60.274 57.143 0.00 0.00 43.89 3.97
297 298 0.340908 GGGAGTACCAAGTAGGGGGA 59.659 60.000 0.00 0.00 43.89 4.81
298 299 0.342313 AGGGAGTACCAAGTAGGGGG 59.658 60.000 0.00 0.00 43.89 5.40
299 300 1.691801 GGAGGGAGTACCAAGTAGGGG 60.692 61.905 0.00 0.00 43.89 4.79
300 301 1.790818 GGAGGGAGTACCAAGTAGGG 58.209 60.000 0.00 0.00 43.89 3.53
301 302 1.400737 CGGAGGGAGTACCAAGTAGG 58.599 60.000 0.00 0.00 43.89 3.18
316 317 2.289444 TGCAGAGTAAAAAGGACCGGAG 60.289 50.000 9.46 0.00 0.00 4.63
317 318 1.695242 TGCAGAGTAAAAAGGACCGGA 59.305 47.619 9.46 0.00 0.00 5.14
318 319 1.804748 GTGCAGAGTAAAAAGGACCGG 59.195 52.381 0.00 0.00 0.00 5.28
319 320 2.489971 TGTGCAGAGTAAAAAGGACCG 58.510 47.619 0.00 0.00 0.00 4.79
320 321 4.321230 CCAATGTGCAGAGTAAAAAGGACC 60.321 45.833 0.00 0.00 0.00 4.46
321 322 4.278419 ACCAATGTGCAGAGTAAAAAGGAC 59.722 41.667 0.00 0.00 0.00 3.85
322 323 4.469657 ACCAATGTGCAGAGTAAAAAGGA 58.530 39.130 0.00 0.00 0.00 3.36
323 324 4.853924 ACCAATGTGCAGAGTAAAAAGG 57.146 40.909 0.00 0.00 0.00 3.11
324 325 6.509997 GCAAAACCAATGTGCAGAGTAAAAAG 60.510 38.462 0.00 0.00 38.19 2.27
325 326 5.293079 GCAAAACCAATGTGCAGAGTAAAAA 59.707 36.000 0.00 0.00 38.19 1.94
326 327 4.808364 GCAAAACCAATGTGCAGAGTAAAA 59.192 37.500 0.00 0.00 38.19 1.52
327 328 4.367450 GCAAAACCAATGTGCAGAGTAAA 58.633 39.130 0.00 0.00 38.19 2.01
328 329 3.243704 GGCAAAACCAATGTGCAGAGTAA 60.244 43.478 0.00 0.00 40.12 2.24
329 330 2.295909 GGCAAAACCAATGTGCAGAGTA 59.704 45.455 0.00 0.00 40.12 2.59
330 331 1.069049 GGCAAAACCAATGTGCAGAGT 59.931 47.619 0.00 0.00 40.12 3.24
331 332 1.787012 GGCAAAACCAATGTGCAGAG 58.213 50.000 0.00 0.00 40.12 3.35
332 333 0.031857 CGGCAAAACCAATGTGCAGA 59.968 50.000 0.00 0.00 40.12 4.26
333 334 0.031857 TCGGCAAAACCAATGTGCAG 59.968 50.000 0.00 0.00 40.12 4.41
334 335 0.461548 TTCGGCAAAACCAATGTGCA 59.538 45.000 0.00 0.00 40.12 4.57
335 336 1.526464 CTTTCGGCAAAACCAATGTGC 59.474 47.619 0.00 0.00 39.03 4.57
336 337 2.794350 GACTTTCGGCAAAACCAATGTG 59.206 45.455 0.00 0.00 39.03 3.21
337 338 2.428890 TGACTTTCGGCAAAACCAATGT 59.571 40.909 0.00 0.00 39.03 2.71
338 339 3.090952 TGACTTTCGGCAAAACCAATG 57.909 42.857 0.00 0.00 39.03 2.82
339 340 3.810310 TTGACTTTCGGCAAAACCAAT 57.190 38.095 0.00 0.00 39.03 3.16
340 341 3.056465 AGTTTGACTTTCGGCAAAACCAA 60.056 39.130 0.00 0.00 39.03 3.67
341 342 2.494073 AGTTTGACTTTCGGCAAAACCA 59.506 40.909 0.00 0.00 39.03 3.67
342 343 3.159353 AGTTTGACTTTCGGCAAAACC 57.841 42.857 0.00 0.00 35.95 3.27
343 344 5.803461 AGTAAAGTTTGACTTTCGGCAAAAC 59.197 36.000 9.15 1.84 44.47 2.43
344 345 5.956642 AGTAAAGTTTGACTTTCGGCAAAA 58.043 33.333 9.15 0.00 44.47 2.44
345 346 5.570234 AGTAAAGTTTGACTTTCGGCAAA 57.430 34.783 9.15 0.00 44.47 3.68
346 347 6.261381 ACATAGTAAAGTTTGACTTTCGGCAA 59.739 34.615 9.15 0.00 44.47 4.52
347 348 5.761234 ACATAGTAAAGTTTGACTTTCGGCA 59.239 36.000 9.15 0.00 44.47 5.69
348 349 6.237313 ACATAGTAAAGTTTGACTTTCGGC 57.763 37.500 9.15 2.98 44.47 5.54
504 505 9.443283 CGAAATCAATCTCATCCAACTTTAATC 57.557 33.333 0.00 0.00 0.00 1.75
505 506 8.408601 CCGAAATCAATCTCATCCAACTTTAAT 58.591 33.333 0.00 0.00 0.00 1.40
506 507 7.609918 TCCGAAATCAATCTCATCCAACTTTAA 59.390 33.333 0.00 0.00 0.00 1.52
507 508 7.065803 GTCCGAAATCAATCTCATCCAACTTTA 59.934 37.037 0.00 0.00 0.00 1.85
508 509 5.945784 TCCGAAATCAATCTCATCCAACTTT 59.054 36.000 0.00 0.00 0.00 2.66
509 510 5.355350 GTCCGAAATCAATCTCATCCAACTT 59.645 40.000 0.00 0.00 0.00 2.66
510 511 4.878397 GTCCGAAATCAATCTCATCCAACT 59.122 41.667 0.00 0.00 0.00 3.16
511 512 4.635765 TGTCCGAAATCAATCTCATCCAAC 59.364 41.667 0.00 0.00 0.00 3.77
512 513 4.842574 TGTCCGAAATCAATCTCATCCAA 58.157 39.130 0.00 0.00 0.00 3.53
513 514 4.486125 TGTCCGAAATCAATCTCATCCA 57.514 40.909 0.00 0.00 0.00 3.41
514 515 5.449177 GGTTTGTCCGAAATCAATCTCATCC 60.449 44.000 0.00 0.00 0.00 3.51
515 516 5.355350 AGGTTTGTCCGAAATCAATCTCATC 59.645 40.000 0.00 0.00 41.99 2.92
516 517 5.256474 AGGTTTGTCCGAAATCAATCTCAT 58.744 37.500 0.00 0.00 41.99 2.90
517 518 4.651778 AGGTTTGTCCGAAATCAATCTCA 58.348 39.130 0.00 0.00 41.99 3.27
518 519 6.737254 TTAGGTTTGTCCGAAATCAATCTC 57.263 37.500 0.00 0.00 41.99 2.75
519 520 8.840321 CATATTAGGTTTGTCCGAAATCAATCT 58.160 33.333 0.00 0.00 41.99 2.40
520 521 8.621286 ACATATTAGGTTTGTCCGAAATCAATC 58.379 33.333 0.00 0.00 41.99 2.67
521 522 8.519799 ACATATTAGGTTTGTCCGAAATCAAT 57.480 30.769 0.00 0.00 41.99 2.57
522 523 7.931578 ACATATTAGGTTTGTCCGAAATCAA 57.068 32.000 0.00 0.00 41.99 2.57
523 524 8.479689 TCTACATATTAGGTTTGTCCGAAATCA 58.520 33.333 0.00 0.00 41.99 2.57
524 525 8.882415 TCTACATATTAGGTTTGTCCGAAATC 57.118 34.615 0.00 0.00 41.99 2.17
525 526 8.483758 ACTCTACATATTAGGTTTGTCCGAAAT 58.516 33.333 0.00 0.00 41.99 2.17
526 527 7.844009 ACTCTACATATTAGGTTTGTCCGAAA 58.156 34.615 0.00 0.00 41.99 3.46
527 528 7.414222 ACTCTACATATTAGGTTTGTCCGAA 57.586 36.000 0.00 0.00 41.99 4.30
528 529 8.523915 TTACTCTACATATTAGGTTTGTCCGA 57.476 34.615 0.00 0.00 41.99 4.55
529 530 9.590451 TTTTACTCTACATATTAGGTTTGTCCG 57.410 33.333 0.00 0.00 41.99 4.79
536 537 8.419442 CGGTCCTTTTTACTCTACATATTAGGT 58.581 37.037 0.00 0.00 0.00 3.08
537 538 7.871463 CCGGTCCTTTTTACTCTACATATTAGG 59.129 40.741 0.00 0.00 0.00 2.69
538 539 8.636213 TCCGGTCCTTTTTACTCTACATATTAG 58.364 37.037 0.00 0.00 0.00 1.73
539 540 8.537728 TCCGGTCCTTTTTACTCTACATATTA 57.462 34.615 0.00 0.00 0.00 0.98
540 541 7.427989 TCCGGTCCTTTTTACTCTACATATT 57.572 36.000 0.00 0.00 0.00 1.28
541 542 7.442656 CATCCGGTCCTTTTTACTCTACATAT 58.557 38.462 0.00 0.00 0.00 1.78
542 543 6.183360 CCATCCGGTCCTTTTTACTCTACATA 60.183 42.308 0.00 0.00 0.00 2.29
543 544 5.396436 CCATCCGGTCCTTTTTACTCTACAT 60.396 44.000 0.00 0.00 0.00 2.29
544 545 4.081309 CCATCCGGTCCTTTTTACTCTACA 60.081 45.833 0.00 0.00 0.00 2.74
545 546 4.161001 TCCATCCGGTCCTTTTTACTCTAC 59.839 45.833 0.00 0.00 0.00 2.59
546 547 4.355549 TCCATCCGGTCCTTTTTACTCTA 58.644 43.478 0.00 0.00 0.00 2.43
547 548 3.178865 TCCATCCGGTCCTTTTTACTCT 58.821 45.455 0.00 0.00 0.00 3.24
548 549 3.055312 ACTCCATCCGGTCCTTTTTACTC 60.055 47.826 0.00 0.00 0.00 2.59
549 550 2.910977 ACTCCATCCGGTCCTTTTTACT 59.089 45.455 0.00 0.00 0.00 2.24
550 551 3.345508 ACTCCATCCGGTCCTTTTTAC 57.654 47.619 0.00 0.00 0.00 2.01
551 552 5.703730 ATTACTCCATCCGGTCCTTTTTA 57.296 39.130 0.00 0.00 0.00 1.52
552 553 4.586306 ATTACTCCATCCGGTCCTTTTT 57.414 40.909 0.00 0.00 0.00 1.94
553 554 4.263771 ACAATTACTCCATCCGGTCCTTTT 60.264 41.667 0.00 0.00 0.00 2.27
554 555 3.265995 ACAATTACTCCATCCGGTCCTTT 59.734 43.478 0.00 0.00 0.00 3.11
555 556 2.844348 ACAATTACTCCATCCGGTCCTT 59.156 45.455 0.00 0.00 0.00 3.36
556 557 2.478292 ACAATTACTCCATCCGGTCCT 58.522 47.619 0.00 0.00 0.00 3.85
557 558 3.387050 AGTACAATTACTCCATCCGGTCC 59.613 47.826 0.00 0.00 32.67 4.46
558 559 4.618965 GAGTACAATTACTCCATCCGGTC 58.381 47.826 0.00 0.00 46.11 4.79
559 560 4.667519 GAGTACAATTACTCCATCCGGT 57.332 45.455 0.00 0.00 46.11 5.28
568 569 9.197694 GCGAATAATCATGAGAGTACAATTACT 57.802 33.333 0.09 0.00 41.59 2.24
692 693 3.121030 GTAGGCCACACGCAGCAG 61.121 66.667 5.01 0.00 40.31 4.24
743 744 0.532573 GGGTGATCAAGTGAGCGAGA 59.467 55.000 0.00 0.00 32.18 4.04
744 745 0.803768 CGGGTGATCAAGTGAGCGAG 60.804 60.000 0.00 0.00 32.18 5.03
764 765 1.957177 TGTGTTCTTCTCGAGTGCTCT 59.043 47.619 13.13 0.00 0.00 4.09
827 828 9.921637 CACCTAATTCAGCAATTTTTAGGTAAA 57.078 29.630 11.24 0.00 46.44 2.01
828 829 9.084533 ACACCTAATTCAGCAATTTTTAGGTAA 57.915 29.630 11.24 0.00 46.44 2.85
831 832 6.813152 CCACACCTAATTCAGCAATTTTTAGG 59.187 38.462 5.67 5.67 42.92 2.69
832 833 7.378181 ACCACACCTAATTCAGCAATTTTTAG 58.622 34.615 0.00 0.00 33.95 1.85
833 834 7.296628 ACCACACCTAATTCAGCAATTTTTA 57.703 32.000 0.00 0.00 33.95 1.52
834 835 6.173427 ACCACACCTAATTCAGCAATTTTT 57.827 33.333 0.00 0.00 33.95 1.94
835 836 5.806654 ACCACACCTAATTCAGCAATTTT 57.193 34.783 0.00 0.00 33.95 1.82
839 840 3.252215 CGAAACCACACCTAATTCAGCAA 59.748 43.478 0.00 0.00 0.00 3.91
849 850 0.616891 GGGGATACGAAACCACACCT 59.383 55.000 0.00 0.00 37.60 4.00
875 877 4.974645 ATCACAGGTGGAGAGTTTAACA 57.025 40.909 0.00 0.00 0.00 2.41
887 889 8.804688 TTTAAAACCGAATTTAATCACAGGTG 57.195 30.769 6.28 0.00 35.37 4.00
1005 1007 4.003788 CCCGTCAAGCCGACCAGT 62.004 66.667 0.00 0.00 42.07 4.00
1134 1136 0.318107 GCAAGCGCATATTTCGGCAT 60.318 50.000 11.47 0.00 38.36 4.40
1153 1155 4.685165 CAGCATTGTACTATCTAGCAGCAG 59.315 45.833 0.00 0.00 0.00 4.24
1162 1164 4.731773 GCAAAGGCACAGCATTGTACTATC 60.732 45.833 0.00 0.00 40.72 2.08
1163 1165 3.129287 GCAAAGGCACAGCATTGTACTAT 59.871 43.478 0.00 0.00 40.72 2.12
1164 1166 2.487762 GCAAAGGCACAGCATTGTACTA 59.512 45.455 0.00 0.00 40.72 1.82
1165 1167 1.270550 GCAAAGGCACAGCATTGTACT 59.729 47.619 0.00 0.00 40.72 2.73
1166 1168 1.701704 GCAAAGGCACAGCATTGTAC 58.298 50.000 8.04 0.00 40.72 2.90
1222 1224 6.516718 CCACATTCTATTCTGTACTACCCTG 58.483 44.000 0.00 0.00 0.00 4.45
1224 1226 5.070580 AGCCACATTCTATTCTGTACTACCC 59.929 44.000 0.00 0.00 0.00 3.69
1246 1251 9.173939 CTTGCATGCTATACAAAAGTAATTAGC 57.826 33.333 20.33 0.00 34.17 3.09
1280 1296 2.238521 TCCCCAAAAAGCTGATGTGAC 58.761 47.619 0.00 0.00 0.00 3.67
1321 1337 4.039730 ACATTGATTAGGACGAGGATGGAG 59.960 45.833 0.00 0.00 0.00 3.86
1372 1388 7.613585 TCAGGGAGTAACGACACAATAAAATA 58.386 34.615 0.00 0.00 0.00 1.40
1382 1398 2.557056 CAGTTCTCAGGGAGTAACGACA 59.443 50.000 0.00 0.00 30.77 4.35
1383 1399 2.818432 TCAGTTCTCAGGGAGTAACGAC 59.182 50.000 0.00 0.00 30.77 4.34
1385 1401 2.414293 CGTCAGTTCTCAGGGAGTAACG 60.414 54.545 0.00 0.00 30.77 3.18
1404 1434 2.151202 CAGATTACCAAGTGTTGCCGT 58.849 47.619 0.00 0.00 0.00 5.68
1422 1452 7.549134 TCACATAGTTAAAGTCAATACTGCCAG 59.451 37.037 0.00 0.00 35.62 4.85
1459 1489 6.839124 ATTGAGCAGTTTGATTCCATGTTA 57.161 33.333 0.00 0.00 0.00 2.41
1500 1530 7.174946 ACTGTGAAAACCAGTATATGTCTTTGG 59.825 37.037 0.00 0.00 41.24 3.28
1506 1536 5.705441 CACCACTGTGAAAACCAGTATATGT 59.295 40.000 9.86 0.00 45.76 2.29
1508 1538 5.876357 ACACCACTGTGAAAACCAGTATAT 58.124 37.500 9.86 0.00 45.76 0.86
1616 1651 1.231963 GAAGGGGGTATGGGGTCATT 58.768 55.000 0.00 0.00 34.96 2.57
1623 1658 5.515106 TGAATAACAAAGAAGGGGGTATGG 58.485 41.667 0.00 0.00 0.00 2.74
1624 1659 6.095440 CACTGAATAACAAAGAAGGGGGTATG 59.905 42.308 0.00 0.00 0.00 2.39
1625 1660 6.187682 CACTGAATAACAAAGAAGGGGGTAT 58.812 40.000 0.00 0.00 0.00 2.73
1626 1661 5.073965 ACACTGAATAACAAAGAAGGGGGTA 59.926 40.000 0.00 0.00 0.00 3.69
1628 1663 4.218417 CACACTGAATAACAAAGAAGGGGG 59.782 45.833 0.00 0.00 0.00 5.40
1629 1664 4.218417 CCACACTGAATAACAAAGAAGGGG 59.782 45.833 0.00 0.00 0.00 4.79
1630 1665 5.070001 TCCACACTGAATAACAAAGAAGGG 58.930 41.667 0.00 0.00 0.00 3.95
1752 1794 4.039609 GCATGGCATTAGGAATTTAAGGCT 59.960 41.667 0.00 0.00 39.53 4.58
1790 1832 2.501723 ACCTCAACTCACGCCAATCTAT 59.498 45.455 0.00 0.00 0.00 1.98
1862 1904 7.901322 AGATATCCCAGCTATGGTAAGATGTTA 59.099 37.037 0.00 0.00 46.10 2.41
1866 1908 6.751050 AGAGATATCCCAGCTATGGTAAGAT 58.249 40.000 0.00 0.00 46.10 2.40
1943 2068 5.690865 ACCTGTCAGTTCTTATGGTCAAAA 58.309 37.500 0.00 0.00 0.00 2.44
1992 2137 3.255642 GTGGCAGTGGCTTCAAATTAAGA 59.744 43.478 18.53 0.00 40.87 2.10
1995 2140 2.875296 AGTGGCAGTGGCTTCAAATTA 58.125 42.857 18.53 0.00 40.87 1.40
1996 2141 1.708341 AGTGGCAGTGGCTTCAAATT 58.292 45.000 18.53 0.00 40.87 1.82
2004 2149 1.737355 TTTGCTCAAGTGGCAGTGGC 61.737 55.000 10.30 10.30 40.90 5.01
2011 2156 3.354089 AAATCACGTTTGCTCAAGTGG 57.646 42.857 0.00 0.00 35.50 4.00
2101 2246 6.942005 TCATACCAGGGATTGTAATAATGCTG 59.058 38.462 0.00 0.00 0.00 4.41
2103 2248 7.629222 GCATCATACCAGGGATTGTAATAATGC 60.629 40.741 0.00 0.00 0.00 3.56
2135 2280 3.279434 AGCCCCTCGTCAAACATAATTC 58.721 45.455 0.00 0.00 0.00 2.17
2149 2294 0.895559 CAACTGGTCCAAAGCCCCTC 60.896 60.000 0.00 0.00 0.00 4.30
2172 2317 4.437390 GCAAAGTGCCATGTACTGATGTAC 60.437 45.833 0.00 0.00 42.20 2.90
2173 2318 3.689161 GCAAAGTGCCATGTACTGATGTA 59.311 43.478 0.00 0.00 37.42 2.29
2174 2319 2.489329 GCAAAGTGCCATGTACTGATGT 59.511 45.455 0.00 0.00 37.42 3.06
2175 2320 2.751259 AGCAAAGTGCCATGTACTGATG 59.249 45.455 0.00 5.31 46.52 3.07
2176 2321 3.077484 AGCAAAGTGCCATGTACTGAT 57.923 42.857 0.00 0.00 46.52 2.90
2177 2322 2.566833 AGCAAAGTGCCATGTACTGA 57.433 45.000 0.00 0.00 46.52 3.41
2178 2323 3.004629 TGAAAGCAAAGTGCCATGTACTG 59.995 43.478 0.00 0.00 46.52 2.74
2179 2324 3.221771 TGAAAGCAAAGTGCCATGTACT 58.778 40.909 0.00 0.00 46.52 2.73
2283 2485 6.773638 AGAAAGTCAATTATCAGTGTCTGGT 58.226 36.000 0.00 0.00 31.51 4.00
2305 2507 8.655092 CAGCATAAAGTTCAAACAAAAACAAGA 58.345 29.630 0.00 0.00 0.00 3.02
2438 2648 2.354510 CTGACCTAAGAGAGCTCTGTCG 59.645 54.545 23.91 11.83 40.36 4.35
2548 2828 8.244113 TCACATATCTATTCAGTAACCATAGCG 58.756 37.037 0.00 0.00 0.00 4.26
2817 3205 0.665835 TTGCTGTACCCACTTTTGCG 59.334 50.000 0.00 0.00 0.00 4.85
2823 3211 4.775780 TGTAAGTATCTTGCTGTACCCACT 59.224 41.667 0.00 0.00 0.00 4.00
2839 3227 9.706691 GTATAAGCATGCTAGGAAATGTAAGTA 57.293 33.333 23.00 4.93 0.00 2.24
2853 3241 6.118170 ACTGATGACAAAGTATAAGCATGCT 58.882 36.000 16.30 16.30 0.00 3.79
2876 3266 5.662674 ATCCTTAATATCGCAGGGACTAC 57.337 43.478 0.00 0.00 36.02 2.73
2922 3320 1.905839 TTAATCAGGGCCCAGGATCA 58.094 50.000 27.56 10.16 0.00 2.92
2938 3336 7.337942 AGCCACAATGAACAAACCAAAATTTAA 59.662 29.630 0.00 0.00 0.00 1.52
3050 3448 1.374252 AACAGCGGGATGTCGACAC 60.374 57.895 22.71 14.46 31.50 3.67
3257 3655 4.163458 ACTGTTCTTTTGTGTCCTCCAGTA 59.837 41.667 0.00 0.00 0.00 2.74
3270 3668 6.990349 TCAATACTTCTCGGAACTGTTCTTTT 59.010 34.615 19.05 0.00 0.00 2.27
3395 3793 5.824624 TGCAAAGATCATACCAGATTCTTCC 59.175 40.000 0.00 0.00 0.00 3.46
3406 3804 8.388484 ACTTCCTAATGATGCAAAGATCATAC 57.612 34.615 1.08 0.00 41.35 2.39
3422 3820 7.190501 ACCTAGTTCAGTCCTAACTTCCTAAT 58.809 38.462 0.00 0.00 38.18 1.73
3526 3938 2.340210 TCAGCACTTGTGGCAACTAA 57.660 45.000 2.81 0.00 37.61 2.24
3527 3939 2.340210 TTCAGCACTTGTGGCAACTA 57.660 45.000 2.81 0.00 37.61 2.24
3532 3944 3.054878 CTCAAAATTCAGCACTTGTGGC 58.945 45.455 2.81 0.00 0.00 5.01
3625 4084 8.917088 CCATTATTCCATAGTGAATCAAGGTTT 58.083 33.333 0.00 0.00 36.41 3.27
3641 4100 5.598005 CCTCAAAAGCCATACCATTATTCCA 59.402 40.000 0.00 0.00 0.00 3.53
3783 7513 3.631250 TGCTCAAAAGAAAGGGTTGTCT 58.369 40.909 0.00 0.00 0.00 3.41
3784 7514 4.590850 ATGCTCAAAAGAAAGGGTTGTC 57.409 40.909 0.00 0.00 0.00 3.18
3958 7696 4.221422 TAGGATGCAGGCGGACGC 62.221 66.667 8.39 8.39 41.06 5.19
3959 7697 2.279517 GTAGGATGCAGGCGGACG 60.280 66.667 0.00 0.00 0.00 4.79
3977 7715 3.438216 TCTCATTGAAGCCACATCCAA 57.562 42.857 0.00 0.00 0.00 3.53
4037 7775 2.355412 GGGCAACTAAACCCGTAGATGT 60.355 50.000 0.00 0.00 36.07 3.06
4055 7793 2.519302 CAACCGGATGATGGGGGC 60.519 66.667 9.46 0.00 0.00 5.80
4060 7798 5.371115 AACTAAAACACAACCGGATGATG 57.629 39.130 19.77 14.51 0.00 3.07
4061 7799 7.610305 AGATAAACTAAAACACAACCGGATGAT 59.390 33.333 19.77 2.94 0.00 2.45
4063 7801 7.141100 AGATAAACTAAAACACAACCGGATG 57.859 36.000 9.46 10.13 0.00 3.51
4164 7908 3.506067 ACTTTGGTCGGTCATCAATTTCC 59.494 43.478 0.00 0.00 0.00 3.13
4170 7914 2.158885 TGTCAACTTTGGTCGGTCATCA 60.159 45.455 0.00 0.00 0.00 3.07
4232 7976 8.199176 TCATTCAGTCACGTAAACTTTAAACA 57.801 30.769 0.24 0.00 0.00 2.83
4234 7978 9.710979 CTTTCATTCAGTCACGTAAACTTTAAA 57.289 29.630 0.24 0.00 0.00 1.52
4235 7979 9.100554 TCTTTCATTCAGTCACGTAAACTTTAA 57.899 29.630 0.24 0.18 0.00 1.52
4236 7980 8.651391 TCTTTCATTCAGTCACGTAAACTTTA 57.349 30.769 0.24 0.00 0.00 1.85
4237 7981 7.548196 TCTTTCATTCAGTCACGTAAACTTT 57.452 32.000 0.24 0.00 0.00 2.66
4240 7984 7.184106 TGTTTCTTTCATTCAGTCACGTAAAC 58.816 34.615 0.00 0.00 0.00 2.01
4244 7988 7.307989 CCTTATGTTTCTTTCATTCAGTCACGT 60.308 37.037 0.00 0.00 0.00 4.49
4245 7989 7.017645 CCTTATGTTTCTTTCATTCAGTCACG 58.982 38.462 0.00 0.00 0.00 4.35
4247 7991 6.348458 CGCCTTATGTTTCTTTCATTCAGTCA 60.348 38.462 0.00 0.00 0.00 3.41
4248 7992 6.024049 CGCCTTATGTTTCTTTCATTCAGTC 58.976 40.000 0.00 0.00 0.00 3.51
4250 7994 5.942872 ACGCCTTATGTTTCTTTCATTCAG 58.057 37.500 0.00 0.00 0.00 3.02
4251 7995 5.957842 ACGCCTTATGTTTCTTTCATTCA 57.042 34.783 0.00 0.00 0.00 2.57
4252 7996 8.021396 ACTTAACGCCTTATGTTTCTTTCATTC 58.979 33.333 0.00 0.00 0.00 2.67
4253 7997 7.882179 ACTTAACGCCTTATGTTTCTTTCATT 58.118 30.769 0.00 0.00 0.00 2.57
4254 7998 7.448748 ACTTAACGCCTTATGTTTCTTTCAT 57.551 32.000 0.00 0.00 0.00 2.57
4255 7999 6.870971 ACTTAACGCCTTATGTTTCTTTCA 57.129 33.333 0.00 0.00 0.00 2.69
4256 8000 7.858879 TCAAACTTAACGCCTTATGTTTCTTTC 59.141 33.333 13.06 0.00 37.78 2.62
4257 8001 7.708998 TCAAACTTAACGCCTTATGTTTCTTT 58.291 30.769 13.06 0.00 37.78 2.52
4258 8002 7.012989 ACTCAAACTTAACGCCTTATGTTTCTT 59.987 33.333 13.06 3.16 37.78 2.52
4259 8003 6.485648 ACTCAAACTTAACGCCTTATGTTTCT 59.514 34.615 13.06 2.15 37.78 2.52
4260 8004 6.577427 CACTCAAACTTAACGCCTTATGTTTC 59.423 38.462 13.06 0.00 37.78 2.78
4261 8005 6.261381 TCACTCAAACTTAACGCCTTATGTTT 59.739 34.615 11.23 11.23 39.24 2.83
4262 8006 5.761234 TCACTCAAACTTAACGCCTTATGTT 59.239 36.000 2.32 2.32 33.66 2.71
4263 8007 5.302360 TCACTCAAACTTAACGCCTTATGT 58.698 37.500 0.00 0.00 0.00 2.29
4264 8008 5.637810 TCTCACTCAAACTTAACGCCTTATG 59.362 40.000 0.00 0.00 0.00 1.90
4265 8009 5.790593 TCTCACTCAAACTTAACGCCTTAT 58.209 37.500 0.00 0.00 0.00 1.73
4266 8010 5.010314 TCTCTCACTCAAACTTAACGCCTTA 59.990 40.000 0.00 0.00 0.00 2.69
4267 8011 4.058817 CTCTCACTCAAACTTAACGCCTT 58.941 43.478 0.00 0.00 0.00 4.35
4268 8012 3.321111 TCTCTCACTCAAACTTAACGCCT 59.679 43.478 0.00 0.00 0.00 5.52
4269 8013 3.650139 TCTCTCACTCAAACTTAACGCC 58.350 45.455 0.00 0.00 0.00 5.68
4270 8014 4.149046 CACTCTCTCACTCAAACTTAACGC 59.851 45.833 0.00 0.00 0.00 4.84
4271 8015 4.681942 CCACTCTCTCACTCAAACTTAACG 59.318 45.833 0.00 0.00 0.00 3.18
4272 8016 5.602628 ACCACTCTCTCACTCAAACTTAAC 58.397 41.667 0.00 0.00 0.00 2.01
4273 8017 5.871396 ACCACTCTCTCACTCAAACTTAA 57.129 39.130 0.00 0.00 0.00 1.85
4274 8018 6.719829 TCATACCACTCTCTCACTCAAACTTA 59.280 38.462 0.00 0.00 0.00 2.24
4275 8019 5.540337 TCATACCACTCTCTCACTCAAACTT 59.460 40.000 0.00 0.00 0.00 2.66
4276 8020 5.080337 TCATACCACTCTCTCACTCAAACT 58.920 41.667 0.00 0.00 0.00 2.66
4277 8021 5.392767 TCATACCACTCTCTCACTCAAAC 57.607 43.478 0.00 0.00 0.00 2.93
4278 8022 6.401394 CATTCATACCACTCTCTCACTCAAA 58.599 40.000 0.00 0.00 0.00 2.69
4279 8023 5.105187 CCATTCATACCACTCTCTCACTCAA 60.105 44.000 0.00 0.00 0.00 3.02
4280 8024 4.403752 CCATTCATACCACTCTCTCACTCA 59.596 45.833 0.00 0.00 0.00 3.41
4288 8032 6.620877 TTAGACAACCATTCATACCACTCT 57.379 37.500 0.00 0.00 0.00 3.24
4347 8091 9.074443 TGAATTTTCTAAAAACGTAACGCTTTT 57.926 25.926 0.00 0.00 38.41 2.27
4350 8094 8.791355 AATGAATTTTCTAAAAACGTAACGCT 57.209 26.923 0.00 0.00 0.00 5.07
4365 8109 8.948853 TGTCGACATGTCTTAAATGAATTTTC 57.051 30.769 22.95 1.51 0.00 2.29
4370 8114 7.441157 ACTCTTTGTCGACATGTCTTAAATGAA 59.559 33.333 20.80 4.92 0.00 2.57
4373 8117 6.347725 GCACTCTTTGTCGACATGTCTTAAAT 60.348 38.462 20.80 5.10 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.