Multiple sequence alignment - TraesCS3A01G168100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G168100 chr3A 100.000 4929 0 0 1 4929 175236485 175241413 0.000000e+00 9103.0
1 TraesCS3A01G168100 chr3A 76.889 900 143 37 3205 4073 174544044 174544909 2.710000e-122 449.0
2 TraesCS3A01G168100 chr3A 83.333 510 49 16 47 535 224354517 224355011 5.860000e-119 438.0
3 TraesCS3A01G168100 chr3A 86.723 354 37 6 197 544 987347 986998 7.740000e-103 385.0
4 TraesCS3A01G168100 chr3A 88.571 140 9 4 779 918 639668760 639668628 3.950000e-36 163.0
5 TraesCS3A01G168100 chr3A 86.620 142 12 3 779 920 726231983 726232117 3.070000e-32 150.0
6 TraesCS3A01G168100 chr3A 85.517 145 14 5 779 923 63845379 63845242 1.430000e-30 145.0
7 TraesCS3A01G168100 chr3A 89.216 102 11 0 47 148 95938500 95938601 1.440000e-25 128.0
8 TraesCS3A01G168100 chr3D 94.018 1655 66 15 2490 4128 155952284 155953921 0.000000e+00 2477.0
9 TraesCS3A01G168100 chr3D 96.922 1137 29 5 1367 2498 155949954 155951089 0.000000e+00 1901.0
10 TraesCS3A01G168100 chr3D 88.488 721 63 7 53 767 155946746 155947452 0.000000e+00 854.0
11 TraesCS3A01G168100 chr3D 95.034 443 14 4 938 1378 155947456 155947892 0.000000e+00 689.0
12 TraesCS3A01G168100 chr3D 76.692 1064 150 57 3044 4073 155685013 155686012 7.370000e-138 501.0
13 TraesCS3A01G168100 chr3D 83.421 380 30 18 4144 4506 155953991 155954354 6.150000e-84 322.0
14 TraesCS3A01G168100 chr3D 80.723 249 29 12 2729 2970 155684745 155684981 5.070000e-40 176.0
15 TraesCS3A01G168100 chr3D 87.013 77 6 3 2598 2671 155684173 155684248 3.160000e-12 84.2
16 TraesCS3A01G168100 chr3B 92.904 1677 61 21 928 2572 225800351 225798701 0.000000e+00 2385.0
17 TraesCS3A01G168100 chr3B 88.737 1971 166 32 2537 4486 225798698 225796763 0.000000e+00 2359.0
18 TraesCS3A01G168100 chr3B 90.153 782 65 6 1 772 225802893 225802114 0.000000e+00 1007.0
19 TraesCS3A01G168100 chr3B 77.542 895 132 38 3044 3929 226003284 226002450 4.460000e-130 475.0
20 TraesCS3A01G168100 chr3B 84.314 255 28 10 4679 4927 606433142 606432894 6.380000e-59 239.0
21 TraesCS3A01G168100 chr3B 84.896 192 24 5 4698 4886 788206724 788206535 6.510000e-44 189.0
22 TraesCS3A01G168100 chr3B 87.770 139 10 3 779 917 393209824 393209955 6.610000e-34 156.0
23 TraesCS3A01G168100 chr3B 77.957 186 31 8 4698 4876 18396983 18397165 1.880000e-19 108.0
24 TraesCS3A01G168100 chr7A 83.988 687 83 14 44 717 217390890 217390218 6.960000e-178 634.0
25 TraesCS3A01G168100 chr7A 87.500 224 18 6 475 689 541900936 541900714 2.950000e-62 250.0
26 TraesCS3A01G168100 chr7A 84.409 186 26 3 4690 4872 13919303 13919488 3.920000e-41 180.0
27 TraesCS3A01G168100 chr7A 88.889 135 8 3 778 912 619043171 619043298 5.110000e-35 159.0
28 TraesCS3A01G168100 chr7A 87.770 139 10 3 781 919 689971535 689971666 6.610000e-34 156.0
29 TraesCS3A01G168100 chr7A 85.616 146 13 4 779 923 677618110 677617972 3.980000e-31 147.0
30 TraesCS3A01G168100 chr1D 84.211 608 77 14 115 710 454300493 454299893 1.540000e-159 573.0
31 TraesCS3A01G168100 chr1D 82.599 431 52 14 45 463 413230555 413230974 4.690000e-95 359.0
32 TraesCS3A01G168100 chr1D 88.686 274 23 4 349 615 473706255 473706527 1.320000e-85 327.0
33 TraesCS3A01G168100 chr7D 80.280 715 92 27 14 704 524301930 524302619 1.230000e-135 494.0
34 TraesCS3A01G168100 chr4D 87.533 377 41 6 347 717 486097348 486097724 9.800000e-117 431.0
35 TraesCS3A01G168100 chr7B 83.881 335 31 9 142 464 156758801 156759124 1.040000e-76 298.0
36 TraesCS3A01G168100 chr7B 76.923 221 41 10 4691 4905 692347953 692348169 3.120000e-22 117.0
37 TraesCS3A01G168100 chr7B 81.481 135 16 5 14 148 580956412 580956287 8.730000e-18 102.0
38 TraesCS3A01G168100 chr1A 79.271 439 54 20 35 464 351471578 351471988 6.290000e-69 272.0
39 TraesCS3A01G168100 chr4A 82.937 252 35 7 4679 4924 626214865 626214616 2.310000e-53 220.0
40 TraesCS3A01G168100 chr6B 84.729 203 27 3 516 715 255533040 255532839 3.010000e-47 200.0
41 TraesCS3A01G168100 chr6B 88.750 80 5 3 8 85 702281577 702281654 1.460000e-15 95.3
42 TraesCS3A01G168100 chr5B 90.000 140 12 2 10 148 158762537 158762399 3.920000e-41 180.0
43 TraesCS3A01G168100 chr1B 80.591 237 38 7 4698 4927 566713990 566713755 5.070000e-40 176.0
44 TraesCS3A01G168100 chrUn 83.246 191 27 5 4691 4876 47860198 47860008 2.360000e-38 171.0
45 TraesCS3A01G168100 chr5A 87.324 142 11 3 779 920 396391492 396391626 6.610000e-34 156.0
46 TraesCS3A01G168100 chr5A 82.482 137 15 1 12 148 510466356 510466229 1.450000e-20 111.0
47 TraesCS3A01G168100 chr4B 86.667 150 9 5 768 913 579397132 579397274 6.610000e-34 156.0
48 TraesCS3A01G168100 chr5D 86.325 117 7 1 14 130 259174604 259174711 8.670000e-23 119.0
49 TraesCS3A01G168100 chr5D 89.744 78 8 0 13 90 535922868 535922791 3.140000e-17 100.0
50 TraesCS3A01G168100 chr6A 91.358 81 6 1 1 81 74146978 74147057 5.220000e-20 110.0
51 TraesCS3A01G168100 chr6A 91.045 67 6 0 82 148 522458936 522459002 1.890000e-14 91.6
52 TraesCS3A01G168100 chr2D 80.795 151 17 7 10 148 403503701 403503551 1.880000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G168100 chr3A 175236485 175241413 4928 False 9103.000000 9103 100.0000 1 4929 1 chr3A.!!$F3 4928
1 TraesCS3A01G168100 chr3A 174544044 174544909 865 False 449.000000 449 76.8890 3205 4073 1 chr3A.!!$F2 868
2 TraesCS3A01G168100 chr3D 155946746 155954354 7608 False 1248.600000 2477 91.5766 53 4506 5 chr3D.!!$F2 4453
3 TraesCS3A01G168100 chr3D 155684173 155686012 1839 False 253.733333 501 81.4760 2598 4073 3 chr3D.!!$F1 1475
4 TraesCS3A01G168100 chr3B 225796763 225802893 6130 True 1917.000000 2385 90.5980 1 4486 3 chr3B.!!$R4 4485
5 TraesCS3A01G168100 chr3B 226002450 226003284 834 True 475.000000 475 77.5420 3044 3929 1 chr3B.!!$R1 885
6 TraesCS3A01G168100 chr7A 217390218 217390890 672 True 634.000000 634 83.9880 44 717 1 chr7A.!!$R1 673
7 TraesCS3A01G168100 chr1D 454299893 454300493 600 True 573.000000 573 84.2110 115 710 1 chr1D.!!$R1 595
8 TraesCS3A01G168100 chr7D 524301930 524302619 689 False 494.000000 494 80.2800 14 704 1 chr7D.!!$F1 690

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
774 917 0.040958 CCGCGCCTATTGAAATGCTC 60.041 55.0 0.0 0.0 0.0 4.26 F
2050 5890 0.550914 GTTGATATGGGCACAGGGGA 59.449 55.0 0.0 0.0 0.0 4.81 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2361 6208 0.458669 TAGCAGTACAAGCTACGGGC 59.541 55.0 13.95 0.0 43.25 6.13 R
3967 9607 0.178926 TCCCTGTTGTCCTCCGGTAA 60.179 55.0 0.00 0.0 0.00 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.032860 CTACGAGAGGCATGGGTGGG 62.033 65.000 0.00 0.00 0.00 4.61
40 41 1.623542 GGTTCGGAGCTACCATGGGT 61.624 60.000 18.09 4.30 40.16 4.51
81 83 0.681733 TTCGGAGCTATCATGGGAGC 59.318 55.000 10.73 10.73 39.08 4.70
85 87 1.353694 GGAGCTATCATGGGAGCCATT 59.646 52.381 14.02 0.00 42.23 3.16
165 275 1.823295 GCTTCGGAGCTACCATGGA 59.177 57.895 21.47 0.67 45.65 3.41
168 278 1.757118 CTTCGGAGCTACCATGGAAGA 59.243 52.381 21.47 1.83 36.45 2.87
171 281 1.471676 CGGAGCTACCATGGAAGACAC 60.472 57.143 21.47 4.96 38.90 3.67
172 282 1.834263 GGAGCTACCATGGAAGACACT 59.166 52.381 21.47 6.46 38.79 3.55
173 283 2.237392 GGAGCTACCATGGAAGACACTT 59.763 50.000 21.47 0.00 38.79 3.16
194 304 5.126061 ACTTGAAGCATGAGTTTTGTGTCTT 59.874 36.000 0.00 0.00 0.00 3.01
219 330 2.285969 AGGCATGGGAGCACCTCT 60.286 61.111 0.00 0.00 41.11 3.69
236 347 1.556451 CTCTGGTGACATGGATGGACA 59.444 52.381 0.00 0.00 41.51 4.02
296 407 2.002586 CGTTGGAGATCTTGCGAACAT 58.997 47.619 0.00 0.00 0.00 2.71
308 419 1.065926 TGCGAACATCATCCAAGCTCT 60.066 47.619 0.00 0.00 0.00 4.09
328 439 3.215606 GATGACGATGCGGCGCTTC 62.216 63.158 33.26 31.85 37.93 3.86
376 499 2.695666 TCATCGGATGAGGAGGAAGAAC 59.304 50.000 16.44 0.00 33.59 3.01
464 593 7.877097 TCATAAATTTGGTTGGGTGATTTTGAG 59.123 33.333 0.00 0.00 0.00 3.02
482 611 4.841443 TGAGCTATGCCATGCAATTAAG 57.159 40.909 0.00 0.00 43.62 1.85
581 717 3.058773 TATTTGCAAGCGCCGGCA 61.059 55.556 28.98 18.36 43.41 5.69
679 822 3.007635 GCTCCCTACTGCGTGTAAAAAT 58.992 45.455 0.00 0.00 0.00 1.82
767 910 0.107410 ATTGAACCCGCGCCTATTGA 60.107 50.000 0.00 0.00 0.00 2.57
772 915 1.008538 CCCGCGCCTATTGAAATGC 60.009 57.895 0.00 0.00 0.00 3.56
773 916 1.447317 CCCGCGCCTATTGAAATGCT 61.447 55.000 0.00 0.00 0.00 3.79
774 917 0.040958 CCGCGCCTATTGAAATGCTC 60.041 55.000 0.00 0.00 0.00 4.26
775 918 0.940126 CGCGCCTATTGAAATGCTCT 59.060 50.000 0.00 0.00 0.00 4.09
776 919 1.331756 CGCGCCTATTGAAATGCTCTT 59.668 47.619 0.00 0.00 0.00 2.85
777 920 2.543848 CGCGCCTATTGAAATGCTCTTA 59.456 45.455 0.00 0.00 0.00 2.10
778 921 3.604772 CGCGCCTATTGAAATGCTCTTAC 60.605 47.826 0.00 0.00 0.00 2.34
779 922 3.304057 GCGCCTATTGAAATGCTCTTACC 60.304 47.826 0.00 0.00 0.00 2.85
780 923 3.876914 CGCCTATTGAAATGCTCTTACCA 59.123 43.478 0.00 0.00 0.00 3.25
783 926 5.358160 GCCTATTGAAATGCTCTTACCAGTT 59.642 40.000 0.00 0.00 0.00 3.16
784 927 6.458888 GCCTATTGAAATGCTCTTACCAGTTC 60.459 42.308 0.00 0.00 37.68 3.01
785 928 6.825721 CCTATTGAAATGCTCTTACCAGTTCT 59.174 38.462 0.00 0.00 37.93 3.01
786 929 7.337942 CCTATTGAAATGCTCTTACCAGTTCTT 59.662 37.037 0.00 0.00 37.93 2.52
787 930 6.959639 TTGAAATGCTCTTACCAGTTCTTT 57.040 33.333 0.00 0.00 37.93 2.52
788 931 6.959639 TGAAATGCTCTTACCAGTTCTTTT 57.040 33.333 0.00 0.00 37.93 2.27
789 932 8.458573 TTGAAATGCTCTTACCAGTTCTTTTA 57.541 30.769 0.00 0.00 37.93 1.52
790 933 8.099364 TGAAATGCTCTTACCAGTTCTTTTAG 57.901 34.615 0.00 0.00 37.93 1.85
791 934 7.174946 TGAAATGCTCTTACCAGTTCTTTTAGG 59.825 37.037 0.00 0.00 37.93 2.69
792 935 4.324267 TGCTCTTACCAGTTCTTTTAGGC 58.676 43.478 0.00 0.00 0.00 3.93
793 936 3.371285 GCTCTTACCAGTTCTTTTAGGCG 59.629 47.826 0.00 0.00 0.00 5.52
794 937 4.817517 CTCTTACCAGTTCTTTTAGGCGA 58.182 43.478 0.00 0.00 0.00 5.54
795 938 5.416271 TCTTACCAGTTCTTTTAGGCGAT 57.584 39.130 0.00 0.00 0.00 4.58
796 939 5.801380 TCTTACCAGTTCTTTTAGGCGATT 58.199 37.500 0.00 0.00 0.00 3.34
797 940 5.873164 TCTTACCAGTTCTTTTAGGCGATTC 59.127 40.000 0.00 0.00 0.00 2.52
798 941 4.287766 ACCAGTTCTTTTAGGCGATTCT 57.712 40.909 0.00 0.00 0.00 2.40
799 942 5.416271 ACCAGTTCTTTTAGGCGATTCTA 57.584 39.130 0.00 0.00 0.00 2.10
800 943 5.990668 ACCAGTTCTTTTAGGCGATTCTAT 58.009 37.500 0.00 0.00 0.00 1.98
801 944 6.415573 ACCAGTTCTTTTAGGCGATTCTATT 58.584 36.000 0.00 0.00 0.00 1.73
802 945 6.539103 ACCAGTTCTTTTAGGCGATTCTATTC 59.461 38.462 0.00 0.00 0.00 1.75
803 946 6.763610 CCAGTTCTTTTAGGCGATTCTATTCT 59.236 38.462 0.00 0.00 0.00 2.40
804 947 7.926555 CCAGTTCTTTTAGGCGATTCTATTCTA 59.073 37.037 0.00 0.00 0.00 2.10
806 949 9.699703 AGTTCTTTTAGGCGATTCTATTCTATC 57.300 33.333 0.00 0.00 0.00 2.08
807 950 9.477484 GTTCTTTTAGGCGATTCTATTCTATCA 57.523 33.333 0.00 0.00 0.00 2.15
809 952 9.078990 TCTTTTAGGCGATTCTATTCTATCAGA 57.921 33.333 0.00 0.00 0.00 3.27
810 953 9.698309 CTTTTAGGCGATTCTATTCTATCAGAA 57.302 33.333 0.00 0.00 38.78 3.02
818 961 3.769844 TCTATTCTATCAGAATCGCCCCC 59.230 47.826 4.73 0.00 40.75 5.40
819 962 1.801242 TTCTATCAGAATCGCCCCCA 58.199 50.000 0.00 0.00 0.00 4.96
820 963 2.030027 TCTATCAGAATCGCCCCCAT 57.970 50.000 0.00 0.00 0.00 4.00
822 965 0.984230 TATCAGAATCGCCCCCATCC 59.016 55.000 0.00 0.00 0.00 3.51
823 966 0.769776 ATCAGAATCGCCCCCATCCT 60.770 55.000 0.00 0.00 0.00 3.24
824 967 1.072159 CAGAATCGCCCCCATCCTC 59.928 63.158 0.00 0.00 0.00 3.71
825 968 1.384502 AGAATCGCCCCCATCCTCA 60.385 57.895 0.00 0.00 0.00 3.86
826 969 0.988145 AGAATCGCCCCCATCCTCAA 60.988 55.000 0.00 0.00 0.00 3.02
827 970 0.819666 GAATCGCCCCCATCCTCAAC 60.820 60.000 0.00 0.00 0.00 3.18
828 971 1.281925 AATCGCCCCCATCCTCAACT 61.282 55.000 0.00 0.00 0.00 3.16
830 973 1.000896 CGCCCCCATCCTCAACTTT 60.001 57.895 0.00 0.00 0.00 2.66
831 974 0.611896 CGCCCCCATCCTCAACTTTT 60.612 55.000 0.00 0.00 0.00 2.27
832 975 1.186200 GCCCCCATCCTCAACTTTTC 58.814 55.000 0.00 0.00 0.00 2.29
835 978 2.310052 CCCCCATCCTCAACTTTTCTCT 59.690 50.000 0.00 0.00 0.00 3.10
837 980 3.009473 CCCCATCCTCAACTTTTCTCTCA 59.991 47.826 0.00 0.00 0.00 3.27
838 981 4.260170 CCCATCCTCAACTTTTCTCTCAG 58.740 47.826 0.00 0.00 0.00 3.35
840 983 5.513788 CCCATCCTCAACTTTTCTCTCAGAA 60.514 44.000 0.00 0.00 31.28 3.02
841 984 6.179040 CCATCCTCAACTTTTCTCTCAGAAT 58.821 40.000 0.00 0.00 33.67 2.40
843 986 6.425210 TCCTCAACTTTTCTCTCAGAATCA 57.575 37.500 0.00 0.00 33.67 2.57
845 988 7.102346 TCCTCAACTTTTCTCTCAGAATCATC 58.898 38.462 0.00 0.00 33.67 2.92
846 989 6.877855 CCTCAACTTTTCTCTCAGAATCATCA 59.122 38.462 0.00 0.00 33.67 3.07
847 990 7.148440 CCTCAACTTTTCTCTCAGAATCATCAC 60.148 40.741 0.00 0.00 33.67 3.06
848 991 7.448420 TCAACTTTTCTCTCAGAATCATCACT 58.552 34.615 0.00 0.00 33.67 3.41
849 992 7.601886 TCAACTTTTCTCTCAGAATCATCACTC 59.398 37.037 0.00 0.00 33.67 3.51
850 993 7.243604 ACTTTTCTCTCAGAATCATCACTCT 57.756 36.000 0.00 0.00 33.67 3.24
857 1000 9.585369 TCTCTCAGAATCATCACTCTATATGTT 57.415 33.333 0.00 0.00 0.00 2.71
1028 2779 2.690497 TCCCTTCGAGAACAGCATAGAG 59.310 50.000 0.00 0.00 0.00 2.43
1947 5787 2.161855 CAGGCAACAATGGTCTAGCAA 58.838 47.619 0.00 0.00 41.41 3.91
1977 5817 1.672356 CTTGGTGTGAGCGAAGGGG 60.672 63.158 0.00 0.00 0.00 4.79
2036 5876 3.297134 AGGTTGTGGACACTTGTTGAT 57.703 42.857 3.91 0.00 0.00 2.57
2039 5879 4.761739 AGGTTGTGGACACTTGTTGATATG 59.238 41.667 3.91 0.00 0.00 1.78
2050 5890 0.550914 GTTGATATGGGCACAGGGGA 59.449 55.000 0.00 0.00 0.00 4.81
2361 6208 0.604578 TTCCTCGGGTTAGGTGTTCG 59.395 55.000 0.00 0.00 37.91 3.95
2377 6224 0.108992 TTCGCCCGTAGCTTGTACTG 60.109 55.000 0.00 0.00 40.39 2.74
2378 6225 2.165301 CGCCCGTAGCTTGTACTGC 61.165 63.158 0.00 0.00 40.39 4.40
2386 6233 4.235360 CGTAGCTTGTACTGCTAGTGTTT 58.765 43.478 17.22 0.00 42.74 2.83
2388 6235 5.285607 CGTAGCTTGTACTGCTAGTGTTTAC 59.714 44.000 17.22 8.78 42.74 2.01
2479 6333 4.883585 GCATCTGGAGATCATTTTGTGGTA 59.116 41.667 0.00 0.00 31.21 3.25
2483 6337 3.591527 TGGAGATCATTTTGTGGTACCCT 59.408 43.478 10.07 0.00 0.00 4.34
2498 6352 6.157820 TGTGGTACCCTCATCTCATTTTATCA 59.842 38.462 10.07 0.00 0.00 2.15
2499 6353 6.708054 GTGGTACCCTCATCTCATTTTATCAG 59.292 42.308 10.07 0.00 0.00 2.90
2506 7568 6.095860 CCTCATCTCATTTTATCAGGCAAACA 59.904 38.462 0.00 0.00 0.00 2.83
2507 7569 7.363181 CCTCATCTCATTTTATCAGGCAAACAA 60.363 37.037 0.00 0.00 0.00 2.83
2553 7616 7.992608 TGAGCCTTAGCAATGTGATCTTATTTA 59.007 33.333 0.00 0.00 43.56 1.40
2650 7779 6.124088 AGCATGTTAAGTAGCTAAATGCAC 57.876 37.500 10.49 0.00 45.94 4.57
2766 8342 8.531982 AGTTGATAGTTCATGCACTAGTAAGAA 58.468 33.333 10.93 0.00 32.66 2.52
2864 8444 1.847328 TATCTTGGCTCGAGGTCACA 58.153 50.000 15.58 0.00 0.00 3.58
3042 8638 5.184096 TGCTTAATTGTATTTTTCGCTGGGA 59.816 36.000 0.00 0.00 0.00 4.37
3169 8765 1.279271 ACTTCCCGTTGCTAGCAAGAT 59.721 47.619 29.99 7.81 36.52 2.40
3170 8766 2.500098 ACTTCCCGTTGCTAGCAAGATA 59.500 45.455 29.99 13.25 36.52 1.98
3171 8767 2.596904 TCCCGTTGCTAGCAAGATAC 57.403 50.000 29.99 17.93 36.52 2.24
3351 8949 2.859165 TCCGGAGAGCAAAAGACAAT 57.141 45.000 0.00 0.00 0.00 2.71
3531 9131 3.428870 CCTCACGCAACTTTAGTGTACTG 59.571 47.826 0.00 0.00 37.20 2.74
3614 9216 2.866762 GAGTGGTTTCAGCGGATGATAC 59.133 50.000 8.09 8.09 37.89 2.24
3692 9296 5.270083 TCAAACTATGTTGCTGTCGTTTTG 58.730 37.500 0.00 0.00 0.00 2.44
3736 9344 6.593770 TGATAGCATGTTGAAACAGTATCGTT 59.406 34.615 1.94 0.00 43.04 3.85
3765 9373 5.128827 TGTCGCATAGTTTCTATTCCTCCTT 59.871 40.000 0.00 0.00 0.00 3.36
3917 9528 4.154015 CCTGCATTGTAGTTTGATCGTTGA 59.846 41.667 0.98 0.00 0.00 3.18
3932 9543 2.156098 TTGAGTTGAGCCCTGGCCT 61.156 57.895 3.32 0.00 43.17 5.19
4098 9739 9.865484 GTTCTTTCACTGTTACTTTAATGACTC 57.135 33.333 0.00 0.00 0.00 3.36
4140 9781 2.997869 CACGTCGTGGATGCATCG 59.002 61.111 20.15 10.18 0.00 3.84
4141 9782 1.805539 CACGTCGTGGATGCATCGT 60.806 57.895 20.15 11.55 0.00 3.73
4142 9783 0.524604 CACGTCGTGGATGCATCGTA 60.525 55.000 20.15 9.26 0.00 3.43
4149 9844 1.594862 GTGGATGCATCGTAGCTGTTC 59.405 52.381 20.15 3.90 34.99 3.18
4160 9855 1.807142 GTAGCTGTTCTGTTGGGAAGC 59.193 52.381 0.00 0.00 0.00 3.86
4161 9856 0.183492 AGCTGTTCTGTTGGGAAGCA 59.817 50.000 0.00 0.00 0.00 3.91
4162 9857 0.595095 GCTGTTCTGTTGGGAAGCAG 59.405 55.000 0.00 0.00 32.72 4.24
4196 9891 3.208747 AGACTTTCCACCATCAAACGT 57.791 42.857 0.00 0.00 0.00 3.99
4224 9919 2.224137 TGGTCGATTGGCTGATCTGATC 60.224 50.000 10.72 10.72 0.00 2.92
4273 9968 4.527038 ACGAACTGTCTATTTTCCTGGAGA 59.473 41.667 0.00 0.00 0.00 3.71
4307 10004 1.116308 TTCGTGTGTTGTCCTGGAGA 58.884 50.000 0.00 0.00 0.00 3.71
4341 10038 4.584325 CAGAATTTGTTTTGGAGGGAGACA 59.416 41.667 0.00 0.00 0.00 3.41
4346 10043 4.243793 TGTTTTGGAGGGAGACAAAAGA 57.756 40.909 0.00 0.00 44.40 2.52
4347 10044 3.951680 TGTTTTGGAGGGAGACAAAAGAC 59.048 43.478 0.00 0.00 44.40 3.01
4348 10045 2.543777 TTGGAGGGAGACAAAAGACG 57.456 50.000 0.00 0.00 0.00 4.18
4349 10046 1.712056 TGGAGGGAGACAAAAGACGA 58.288 50.000 0.00 0.00 0.00 4.20
4350 10047 2.043992 TGGAGGGAGACAAAAGACGAA 58.956 47.619 0.00 0.00 0.00 3.85
4351 10048 2.436542 TGGAGGGAGACAAAAGACGAAA 59.563 45.455 0.00 0.00 0.00 3.46
4352 10049 3.067833 GGAGGGAGACAAAAGACGAAAG 58.932 50.000 0.00 0.00 0.00 2.62
4441 10162 3.637714 GAGCAAACGCTCGTTGGA 58.362 55.556 13.18 0.00 46.06 3.53
4456 10177 0.840617 TTGGACTGCGGCCCATTATA 59.159 50.000 0.00 0.00 31.66 0.98
4482 10203 1.142778 TGCGTTTTGCCAGCGTTTTC 61.143 50.000 0.00 0.00 45.60 2.29
4485 10206 1.923864 CGTTTTGCCAGCGTTTTCTTT 59.076 42.857 0.00 0.00 0.00 2.52
4486 10207 2.034926 CGTTTTGCCAGCGTTTTCTTTC 60.035 45.455 0.00 0.00 0.00 2.62
4487 10208 2.926838 GTTTTGCCAGCGTTTTCTTTCA 59.073 40.909 0.00 0.00 0.00 2.69
4488 10209 2.490328 TTGCCAGCGTTTTCTTTCAG 57.510 45.000 0.00 0.00 0.00 3.02
4490 10211 1.748493 TGCCAGCGTTTTCTTTCAGTT 59.252 42.857 0.00 0.00 0.00 3.16
4491 10212 2.946329 TGCCAGCGTTTTCTTTCAGTTA 59.054 40.909 0.00 0.00 0.00 2.24
4511 10232 9.654663 TCAGTTAAGGTATTTTAGCTCTTTCTC 57.345 33.333 0.00 0.00 35.05 2.87
4512 10233 9.436957 CAGTTAAGGTATTTTAGCTCTTTCTCA 57.563 33.333 0.00 0.00 35.05 3.27
4540 10261 6.496338 AAAAGGTATTTTAGCTGGACTTCG 57.504 37.500 0.00 0.00 36.85 3.79
4541 10262 3.532542 AGGTATTTTAGCTGGACTTCGC 58.467 45.455 0.00 0.00 34.78 4.70
4542 10263 3.197983 AGGTATTTTAGCTGGACTTCGCT 59.802 43.478 0.00 0.00 40.15 4.93
4543 10264 4.404715 AGGTATTTTAGCTGGACTTCGCTA 59.595 41.667 0.00 0.00 37.68 4.26
4544 10265 5.070580 AGGTATTTTAGCTGGACTTCGCTAT 59.929 40.000 0.00 0.00 38.42 2.97
4545 10266 5.758784 GGTATTTTAGCTGGACTTCGCTATT 59.241 40.000 0.00 0.00 38.42 1.73
4546 10267 6.260271 GGTATTTTAGCTGGACTTCGCTATTT 59.740 38.462 0.00 0.00 38.42 1.40
4547 10268 5.796350 TTTTAGCTGGACTTCGCTATTTC 57.204 39.130 0.00 0.00 38.42 2.17
4548 10269 4.465632 TTAGCTGGACTTCGCTATTTCA 57.534 40.909 0.00 0.00 38.42 2.69
4549 10270 2.898705 AGCTGGACTTCGCTATTTCAG 58.101 47.619 0.00 0.00 34.11 3.02
4550 10271 2.497675 AGCTGGACTTCGCTATTTCAGA 59.502 45.455 0.00 0.00 34.11 3.27
4551 10272 2.605366 GCTGGACTTCGCTATTTCAGAC 59.395 50.000 0.00 0.00 0.00 3.51
4552 10273 3.677424 GCTGGACTTCGCTATTTCAGACT 60.677 47.826 0.00 0.00 0.00 3.24
4553 10274 3.849911 TGGACTTCGCTATTTCAGACTG 58.150 45.455 0.00 0.00 0.00 3.51
4554 10275 3.258372 TGGACTTCGCTATTTCAGACTGT 59.742 43.478 1.59 0.00 0.00 3.55
4555 10276 4.246458 GGACTTCGCTATTTCAGACTGTT 58.754 43.478 1.59 0.00 0.00 3.16
4556 10277 4.691216 GGACTTCGCTATTTCAGACTGTTT 59.309 41.667 1.59 0.00 0.00 2.83
4557 10278 5.179555 GGACTTCGCTATTTCAGACTGTTTT 59.820 40.000 1.59 0.00 0.00 2.43
4558 10279 6.293462 GGACTTCGCTATTTCAGACTGTTTTT 60.293 38.462 1.59 0.00 0.00 1.94
4592 10313 8.458843 ACTAAATAATACCTCACACATTGTTGC 58.541 33.333 0.00 0.00 0.00 4.17
4593 10314 3.829886 AATACCTCACACATTGTTGCG 57.170 42.857 0.00 0.00 0.00 4.85
4594 10315 1.518325 TACCTCACACATTGTTGCGG 58.482 50.000 6.50 6.50 0.00 5.69
4595 10316 1.172180 ACCTCACACATTGTTGCGGG 61.172 55.000 10.59 9.22 0.00 6.13
4596 10317 0.888736 CCTCACACATTGTTGCGGGA 60.889 55.000 0.00 0.00 0.00 5.14
4597 10318 0.950836 CTCACACATTGTTGCGGGAA 59.049 50.000 0.00 0.00 0.00 3.97
4598 10319 1.541147 CTCACACATTGTTGCGGGAAT 59.459 47.619 0.00 0.00 0.00 3.01
4599 10320 1.959985 TCACACATTGTTGCGGGAATT 59.040 42.857 0.00 0.00 0.00 2.17
4600 10321 2.060284 CACACATTGTTGCGGGAATTG 58.940 47.619 0.00 0.00 0.00 2.32
4601 10322 1.000731 ACACATTGTTGCGGGAATTGG 59.999 47.619 0.00 0.00 0.00 3.16
4602 10323 1.000731 CACATTGTTGCGGGAATTGGT 59.999 47.619 0.00 0.00 0.00 3.67
4603 10324 1.272212 ACATTGTTGCGGGAATTGGTC 59.728 47.619 0.00 0.00 0.00 4.02
4604 10325 0.525761 ATTGTTGCGGGAATTGGTCG 59.474 50.000 0.00 0.00 0.00 4.79
4605 10326 0.535328 TTGTTGCGGGAATTGGTCGA 60.535 50.000 0.00 0.00 0.00 4.20
4606 10327 1.231958 TGTTGCGGGAATTGGTCGAC 61.232 55.000 7.13 7.13 0.00 4.20
4607 10328 2.030401 TTGCGGGAATTGGTCGACG 61.030 57.895 9.92 0.00 0.00 5.12
4608 10329 3.861263 GCGGGAATTGGTCGACGC 61.861 66.667 9.92 2.99 43.07 5.19
4609 10330 2.433491 CGGGAATTGGTCGACGCA 60.433 61.111 9.92 6.05 0.00 5.24
4610 10331 2.030401 CGGGAATTGGTCGACGCAA 61.030 57.895 17.83 17.83 0.00 4.85
4611 10332 1.570347 CGGGAATTGGTCGACGCAAA 61.570 55.000 18.93 10.50 0.00 3.68
4612 10333 0.808755 GGGAATTGGTCGACGCAAAT 59.191 50.000 18.93 13.13 0.00 2.32
4613 10334 1.201414 GGGAATTGGTCGACGCAAATT 59.799 47.619 18.93 18.10 0.00 1.82
4614 10335 2.352323 GGGAATTGGTCGACGCAAATTT 60.352 45.455 18.93 12.10 0.00 1.82
4615 10336 2.661195 GGAATTGGTCGACGCAAATTTG 59.339 45.455 18.93 14.03 0.00 2.32
4616 10337 2.346099 ATTGGTCGACGCAAATTTGG 57.654 45.000 19.47 11.81 0.00 3.28
4617 10338 1.309950 TTGGTCGACGCAAATTTGGA 58.690 45.000 19.47 5.61 0.00 3.53
4618 10339 1.529226 TGGTCGACGCAAATTTGGAT 58.471 45.000 19.47 1.96 0.00 3.41
4619 10340 1.883275 TGGTCGACGCAAATTTGGATT 59.117 42.857 19.47 0.00 0.00 3.01
4620 10341 2.250188 GGTCGACGCAAATTTGGATTG 58.750 47.619 19.47 0.00 0.00 2.67
4621 10342 2.095466 GGTCGACGCAAATTTGGATTGA 60.095 45.455 19.47 7.80 0.00 2.57
4622 10343 3.427503 GGTCGACGCAAATTTGGATTGAT 60.428 43.478 19.47 0.00 0.00 2.57
4623 10344 4.201871 GGTCGACGCAAATTTGGATTGATA 60.202 41.667 19.47 0.00 0.00 2.15
4624 10345 5.328691 GTCGACGCAAATTTGGATTGATAA 58.671 37.500 19.47 0.00 0.00 1.75
4625 10346 5.797934 GTCGACGCAAATTTGGATTGATAAA 59.202 36.000 19.47 0.00 0.00 1.40
4626 10347 6.306837 GTCGACGCAAATTTGGATTGATAAAA 59.693 34.615 19.47 0.00 0.00 1.52
4627 10348 7.009174 GTCGACGCAAATTTGGATTGATAAAAT 59.991 33.333 19.47 0.00 0.00 1.82
4628 10349 7.009083 TCGACGCAAATTTGGATTGATAAAATG 59.991 33.333 19.47 0.00 0.00 2.32
4629 10350 7.009083 CGACGCAAATTTGGATTGATAAAATGA 59.991 33.333 19.47 0.00 0.00 2.57
4630 10351 8.188531 ACGCAAATTTGGATTGATAAAATGAG 57.811 30.769 19.47 0.00 0.00 2.90
4631 10352 8.034215 ACGCAAATTTGGATTGATAAAATGAGA 58.966 29.630 19.47 0.00 0.00 3.27
4632 10353 8.871862 CGCAAATTTGGATTGATAAAATGAGAA 58.128 29.630 19.47 0.00 0.00 2.87
4633 10354 9.977762 GCAAATTTGGATTGATAAAATGAGAAC 57.022 29.630 19.47 0.00 0.00 3.01
4729 10450 8.997621 AATATCGCGAATATACCAATTACACT 57.002 30.769 15.24 0.00 30.04 3.55
4730 10451 6.946229 ATCGCGAATATACCAATTACACTC 57.054 37.500 15.24 0.00 0.00 3.51
4731 10452 5.834169 TCGCGAATATACCAATTACACTCA 58.166 37.500 6.20 0.00 0.00 3.41
4732 10453 5.918576 TCGCGAATATACCAATTACACTCAG 59.081 40.000 6.20 0.00 0.00 3.35
4733 10454 5.690409 CGCGAATATACCAATTACACTCAGT 59.310 40.000 0.00 0.00 0.00 3.41
4734 10455 6.129168 CGCGAATATACCAATTACACTCAGTC 60.129 42.308 0.00 0.00 0.00 3.51
4735 10456 6.924060 GCGAATATACCAATTACACTCAGTCT 59.076 38.462 0.00 0.00 0.00 3.24
4736 10457 7.115095 GCGAATATACCAATTACACTCAGTCTC 59.885 40.741 0.00 0.00 0.00 3.36
4737 10458 8.353684 CGAATATACCAATTACACTCAGTCTCT 58.646 37.037 0.00 0.00 0.00 3.10
4738 10459 9.469807 GAATATACCAATTACACTCAGTCTCTG 57.530 37.037 0.00 0.00 0.00 3.35
4739 10460 3.931578 ACCAATTACACTCAGTCTCTGC 58.068 45.455 0.00 0.00 0.00 4.26
4740 10461 3.324846 ACCAATTACACTCAGTCTCTGCA 59.675 43.478 0.00 0.00 0.00 4.41
4741 10462 3.681897 CCAATTACACTCAGTCTCTGCAC 59.318 47.826 0.00 0.00 0.00 4.57
4742 10463 3.601443 ATTACACTCAGTCTCTGCACC 57.399 47.619 0.00 0.00 0.00 5.01
4743 10464 1.995376 TACACTCAGTCTCTGCACCA 58.005 50.000 0.00 0.00 0.00 4.17
4744 10465 1.123077 ACACTCAGTCTCTGCACCAA 58.877 50.000 0.00 0.00 0.00 3.67
4745 10466 1.202580 ACACTCAGTCTCTGCACCAAC 60.203 52.381 0.00 0.00 0.00 3.77
4746 10467 1.123077 ACTCAGTCTCTGCACCAACA 58.877 50.000 0.00 0.00 0.00 3.33
4747 10468 1.486310 ACTCAGTCTCTGCACCAACAA 59.514 47.619 0.00 0.00 0.00 2.83
4748 10469 2.141517 CTCAGTCTCTGCACCAACAAG 58.858 52.381 0.00 0.00 0.00 3.16
4749 10470 1.762370 TCAGTCTCTGCACCAACAAGA 59.238 47.619 0.00 0.00 0.00 3.02
4750 10471 2.369860 TCAGTCTCTGCACCAACAAGAT 59.630 45.455 0.00 0.00 0.00 2.40
4751 10472 2.483106 CAGTCTCTGCACCAACAAGATG 59.517 50.000 0.00 0.00 0.00 2.90
4752 10473 2.105477 AGTCTCTGCACCAACAAGATGT 59.895 45.455 0.00 0.00 0.00 3.06
4753 10474 2.481952 GTCTCTGCACCAACAAGATGTC 59.518 50.000 0.00 0.00 0.00 3.06
4754 10475 1.808945 CTCTGCACCAACAAGATGTCC 59.191 52.381 0.00 0.00 0.00 4.02
4755 10476 1.142667 TCTGCACCAACAAGATGTCCA 59.857 47.619 0.00 0.00 0.00 4.02
4756 10477 1.955778 CTGCACCAACAAGATGTCCAA 59.044 47.619 0.00 0.00 0.00 3.53
4757 10478 2.361757 CTGCACCAACAAGATGTCCAAA 59.638 45.455 0.00 0.00 0.00 3.28
4758 10479 2.361757 TGCACCAACAAGATGTCCAAAG 59.638 45.455 0.00 0.00 0.00 2.77
4759 10480 2.622942 GCACCAACAAGATGTCCAAAGA 59.377 45.455 0.00 0.00 0.00 2.52
4760 10481 3.550842 GCACCAACAAGATGTCCAAAGAC 60.551 47.826 0.00 0.00 43.83 3.01
4773 10494 5.476752 GTCCAAAGACATTAGAGATGCAC 57.523 43.478 0.00 0.00 42.99 4.57
4774 10495 4.937620 GTCCAAAGACATTAGAGATGCACA 59.062 41.667 0.00 0.00 42.99 4.57
4775 10496 4.937620 TCCAAAGACATTAGAGATGCACAC 59.062 41.667 0.00 0.00 0.00 3.82
4776 10497 4.696877 CCAAAGACATTAGAGATGCACACA 59.303 41.667 0.00 0.00 0.00 3.72
4777 10498 5.181811 CCAAAGACATTAGAGATGCACACAA 59.818 40.000 0.00 0.00 0.00 3.33
4778 10499 5.869753 AAGACATTAGAGATGCACACAAC 57.130 39.130 0.00 0.00 0.00 3.32
4779 10500 4.256920 AGACATTAGAGATGCACACAACC 58.743 43.478 0.00 0.00 0.00 3.77
4780 10501 4.002982 GACATTAGAGATGCACACAACCA 58.997 43.478 0.00 0.00 0.00 3.67
4781 10502 4.397420 ACATTAGAGATGCACACAACCAA 58.603 39.130 0.00 0.00 0.00 3.67
4782 10503 4.456911 ACATTAGAGATGCACACAACCAAG 59.543 41.667 0.00 0.00 0.00 3.61
4783 10504 2.936919 AGAGATGCACACAACCAAGA 57.063 45.000 0.00 0.00 0.00 3.02
4784 10505 3.213206 AGAGATGCACACAACCAAGAA 57.787 42.857 0.00 0.00 0.00 2.52
4785 10506 3.554934 AGAGATGCACACAACCAAGAAA 58.445 40.909 0.00 0.00 0.00 2.52
4786 10507 3.953612 AGAGATGCACACAACCAAGAAAA 59.046 39.130 0.00 0.00 0.00 2.29
4787 10508 4.402155 AGAGATGCACACAACCAAGAAAAA 59.598 37.500 0.00 0.00 0.00 1.94
4817 10538 7.987750 AAGAGATAAAAAGAGAACAAGACCC 57.012 36.000 0.00 0.00 0.00 4.46
4818 10539 6.166982 AGAGATAAAAAGAGAACAAGACCCG 58.833 40.000 0.00 0.00 0.00 5.28
4819 10540 5.866207 AGATAAAAAGAGAACAAGACCCGT 58.134 37.500 0.00 0.00 0.00 5.28
4820 10541 5.932883 AGATAAAAAGAGAACAAGACCCGTC 59.067 40.000 0.00 0.00 0.00 4.79
4821 10542 2.150397 AAAGAGAACAAGACCCGTCG 57.850 50.000 0.00 0.00 34.09 5.12
4822 10543 0.319641 AAGAGAACAAGACCCGTCGC 60.320 55.000 0.00 0.00 34.09 5.19
4823 10544 2.049433 AGAACAAGACCCGTCGCG 60.049 61.111 0.00 0.00 34.09 5.87
4824 10545 2.049802 GAACAAGACCCGTCGCGA 60.050 61.111 3.71 3.71 34.09 5.87
4825 10546 1.445582 GAACAAGACCCGTCGCGAT 60.446 57.895 14.06 0.00 34.09 4.58
4826 10547 1.411493 GAACAAGACCCGTCGCGATC 61.411 60.000 14.06 5.55 34.09 3.69
4827 10548 2.149803 AACAAGACCCGTCGCGATCA 62.150 55.000 14.06 0.00 34.09 2.92
4828 10549 1.226974 CAAGACCCGTCGCGATCAT 60.227 57.895 14.06 0.00 34.09 2.45
4829 10550 1.226974 AAGACCCGTCGCGATCATG 60.227 57.895 14.06 4.06 34.09 3.07
4830 10551 1.663379 AAGACCCGTCGCGATCATGA 61.663 55.000 14.06 0.00 34.09 3.07
4831 10552 1.226859 GACCCGTCGCGATCATGAA 60.227 57.895 14.06 0.00 0.00 2.57
4832 10553 1.480219 GACCCGTCGCGATCATGAAC 61.480 60.000 14.06 0.00 0.00 3.18
4833 10554 2.237751 CCCGTCGCGATCATGAACC 61.238 63.158 14.06 0.00 0.00 3.62
4834 10555 1.518352 CCGTCGCGATCATGAACCA 60.518 57.895 14.06 0.00 0.00 3.67
4835 10556 1.631072 CGTCGCGATCATGAACCAC 59.369 57.895 14.06 0.00 0.00 4.16
4836 10557 0.802222 CGTCGCGATCATGAACCACT 60.802 55.000 14.06 0.00 0.00 4.00
4837 10558 0.924090 GTCGCGATCATGAACCACTC 59.076 55.000 14.06 0.00 0.00 3.51
4838 10559 0.525455 TCGCGATCATGAACCACTCG 60.525 55.000 3.71 10.56 0.00 4.18
4839 10560 1.638467 GCGATCATGAACCACTCGC 59.362 57.895 20.89 20.89 46.32 5.03
4840 10561 3.049227 CGATCATGAACCACTCGCA 57.951 52.632 0.00 0.00 0.00 5.10
4841 10562 1.358877 CGATCATGAACCACTCGCAA 58.641 50.000 0.00 0.00 0.00 4.85
4842 10563 1.061131 CGATCATGAACCACTCGCAAC 59.939 52.381 0.00 0.00 0.00 4.17
4843 10564 2.076100 GATCATGAACCACTCGCAACA 58.924 47.619 0.00 0.00 0.00 3.33
4844 10565 1.511850 TCATGAACCACTCGCAACAG 58.488 50.000 0.00 0.00 0.00 3.16
4845 10566 0.110056 CATGAACCACTCGCAACAGC 60.110 55.000 0.00 0.00 0.00 4.40
4846 10567 0.534877 ATGAACCACTCGCAACAGCA 60.535 50.000 0.00 0.00 0.00 4.41
4847 10568 1.159713 TGAACCACTCGCAACAGCAG 61.160 55.000 0.00 0.00 0.00 4.24
4848 10569 2.449556 GAACCACTCGCAACAGCAGC 62.450 60.000 0.00 0.00 0.00 5.25
4849 10570 2.974148 CCACTCGCAACAGCAGCA 60.974 61.111 0.00 0.00 0.00 4.41
4850 10571 2.250485 CACTCGCAACAGCAGCAC 59.750 61.111 0.00 0.00 0.00 4.40
4851 10572 2.109799 ACTCGCAACAGCAGCACT 59.890 55.556 0.00 0.00 0.00 4.40
4852 10573 1.958205 ACTCGCAACAGCAGCACTC 60.958 57.895 0.00 0.00 0.00 3.51
4853 10574 1.667191 CTCGCAACAGCAGCACTCT 60.667 57.895 0.00 0.00 0.00 3.24
4854 10575 0.389037 CTCGCAACAGCAGCACTCTA 60.389 55.000 0.00 0.00 0.00 2.43
4855 10576 0.033366 TCGCAACAGCAGCACTCTAA 59.967 50.000 0.00 0.00 0.00 2.10
4856 10577 0.164647 CGCAACAGCAGCACTCTAAC 59.835 55.000 0.00 0.00 0.00 2.34
4857 10578 0.519077 GCAACAGCAGCACTCTAACC 59.481 55.000 0.00 0.00 0.00 2.85
4858 10579 1.882912 CAACAGCAGCACTCTAACCA 58.117 50.000 0.00 0.00 0.00 3.67
4859 10580 1.532868 CAACAGCAGCACTCTAACCAC 59.467 52.381 0.00 0.00 0.00 4.16
4860 10581 1.051812 ACAGCAGCACTCTAACCACT 58.948 50.000 0.00 0.00 0.00 4.00
4861 10582 2.248248 ACAGCAGCACTCTAACCACTA 58.752 47.619 0.00 0.00 0.00 2.74
4862 10583 2.028930 ACAGCAGCACTCTAACCACTAC 60.029 50.000 0.00 0.00 0.00 2.73
4863 10584 2.232452 CAGCAGCACTCTAACCACTACT 59.768 50.000 0.00 0.00 0.00 2.57
4864 10585 2.232452 AGCAGCACTCTAACCACTACTG 59.768 50.000 0.00 0.00 0.00 2.74
4865 10586 2.231478 GCAGCACTCTAACCACTACTGA 59.769 50.000 0.00 0.00 0.00 3.41
4866 10587 3.306088 GCAGCACTCTAACCACTACTGAA 60.306 47.826 0.00 0.00 0.00 3.02
4867 10588 4.489810 CAGCACTCTAACCACTACTGAAG 58.510 47.826 0.00 0.00 0.00 3.02
4868 10589 4.218635 CAGCACTCTAACCACTACTGAAGA 59.781 45.833 0.00 0.00 0.00 2.87
4869 10590 4.218852 AGCACTCTAACCACTACTGAAGAC 59.781 45.833 0.00 0.00 0.00 3.01
4870 10591 4.022242 GCACTCTAACCACTACTGAAGACA 60.022 45.833 0.00 0.00 0.00 3.41
4871 10592 5.509163 GCACTCTAACCACTACTGAAGACAA 60.509 44.000 0.00 0.00 0.00 3.18
4872 10593 6.153067 CACTCTAACCACTACTGAAGACAAG 58.847 44.000 0.00 0.00 0.00 3.16
4873 10594 6.016192 CACTCTAACCACTACTGAAGACAAGA 60.016 42.308 0.00 0.00 0.00 3.02
4874 10595 6.016108 ACTCTAACCACTACTGAAGACAAGAC 60.016 42.308 0.00 0.00 0.00 3.01
4875 10596 4.338379 AACCACTACTGAAGACAAGACC 57.662 45.455 0.00 0.00 0.00 3.85
4876 10597 2.633481 ACCACTACTGAAGACAAGACCC 59.367 50.000 0.00 0.00 0.00 4.46
4877 10598 2.632996 CCACTACTGAAGACAAGACCCA 59.367 50.000 0.00 0.00 0.00 4.51
4878 10599 3.071023 CCACTACTGAAGACAAGACCCAA 59.929 47.826 0.00 0.00 0.00 4.12
4879 10600 4.444306 CCACTACTGAAGACAAGACCCAAA 60.444 45.833 0.00 0.00 0.00 3.28
4880 10601 4.511826 CACTACTGAAGACAAGACCCAAAC 59.488 45.833 0.00 0.00 0.00 2.93
4881 10602 3.933861 ACTGAAGACAAGACCCAAACT 57.066 42.857 0.00 0.00 0.00 2.66
4882 10603 5.601313 ACTACTGAAGACAAGACCCAAACTA 59.399 40.000 0.00 0.00 0.00 2.24
4883 10604 4.704965 ACTGAAGACAAGACCCAAACTAC 58.295 43.478 0.00 0.00 0.00 2.73
4884 10605 4.163458 ACTGAAGACAAGACCCAAACTACA 59.837 41.667 0.00 0.00 0.00 2.74
4885 10606 5.105567 TGAAGACAAGACCCAAACTACAA 57.894 39.130 0.00 0.00 0.00 2.41
4886 10607 5.123227 TGAAGACAAGACCCAAACTACAAG 58.877 41.667 0.00 0.00 0.00 3.16
4887 10608 5.104693 TGAAGACAAGACCCAAACTACAAGA 60.105 40.000 0.00 0.00 0.00 3.02
4888 10609 4.962155 AGACAAGACCCAAACTACAAGAG 58.038 43.478 0.00 0.00 0.00 2.85
4889 10610 4.654262 AGACAAGACCCAAACTACAAGAGA 59.346 41.667 0.00 0.00 0.00 3.10
4890 10611 5.308237 AGACAAGACCCAAACTACAAGAGAT 59.692 40.000 0.00 0.00 0.00 2.75
4891 10612 5.941788 ACAAGACCCAAACTACAAGAGATT 58.058 37.500 0.00 0.00 0.00 2.40
4892 10613 6.365520 ACAAGACCCAAACTACAAGAGATTT 58.634 36.000 0.00 0.00 0.00 2.17
4893 10614 6.833933 ACAAGACCCAAACTACAAGAGATTTT 59.166 34.615 0.00 0.00 0.00 1.82
4894 10615 7.013369 ACAAGACCCAAACTACAAGAGATTTTC 59.987 37.037 0.00 0.00 0.00 2.29
4895 10616 6.004574 AGACCCAAACTACAAGAGATTTTCC 58.995 40.000 0.00 0.00 0.00 3.13
4896 10617 5.701224 ACCCAAACTACAAGAGATTTTCCA 58.299 37.500 0.00 0.00 0.00 3.53
4897 10618 6.133356 ACCCAAACTACAAGAGATTTTCCAA 58.867 36.000 0.00 0.00 0.00 3.53
4898 10619 6.609616 ACCCAAACTACAAGAGATTTTCCAAA 59.390 34.615 0.00 0.00 0.00 3.28
4899 10620 7.125053 ACCCAAACTACAAGAGATTTTCCAAAA 59.875 33.333 0.00 0.00 0.00 2.44
4900 10621 7.653311 CCCAAACTACAAGAGATTTTCCAAAAG 59.347 37.037 0.00 0.00 0.00 2.27
4901 10622 7.169813 CCAAACTACAAGAGATTTTCCAAAAGC 59.830 37.037 0.00 0.00 34.68 3.51
4902 10623 6.959639 ACTACAAGAGATTTTCCAAAAGCA 57.040 33.333 3.09 0.00 36.79 3.91
4903 10624 7.346751 ACTACAAGAGATTTTCCAAAAGCAA 57.653 32.000 3.09 0.00 36.79 3.91
4904 10625 7.203218 ACTACAAGAGATTTTCCAAAAGCAAC 58.797 34.615 3.09 0.00 36.79 4.17
4905 10626 5.976458 ACAAGAGATTTTCCAAAAGCAACA 58.024 33.333 3.09 0.00 36.79 3.33
4906 10627 6.585416 ACAAGAGATTTTCCAAAAGCAACAT 58.415 32.000 3.09 0.00 36.79 2.71
4907 10628 7.049754 ACAAGAGATTTTCCAAAAGCAACATT 58.950 30.769 3.09 0.00 36.79 2.71
4908 10629 7.553760 ACAAGAGATTTTCCAAAAGCAACATTT 59.446 29.630 3.09 0.00 36.79 2.32
4909 10630 7.719778 AGAGATTTTCCAAAAGCAACATTTC 57.280 32.000 3.09 0.00 36.79 2.17
4910 10631 6.707608 AGAGATTTTCCAAAAGCAACATTTCC 59.292 34.615 3.09 0.00 36.79 3.13
4911 10632 6.355747 AGATTTTCCAAAAGCAACATTTCCA 58.644 32.000 3.09 0.00 36.79 3.53
4912 10633 6.827762 AGATTTTCCAAAAGCAACATTTCCAA 59.172 30.769 3.09 0.00 36.79 3.53
4913 10634 6.434018 TTTTCCAAAAGCAACATTTCCAAG 57.566 33.333 0.00 0.00 0.00 3.61
4914 10635 5.350504 TTCCAAAAGCAACATTTCCAAGA 57.649 34.783 0.00 0.00 0.00 3.02
4915 10636 5.350504 TCCAAAAGCAACATTTCCAAGAA 57.649 34.783 0.00 0.00 0.00 2.52
4916 10637 5.358922 TCCAAAAGCAACATTTCCAAGAAG 58.641 37.500 0.00 0.00 0.00 2.85
4917 10638 5.128499 TCCAAAAGCAACATTTCCAAGAAGA 59.872 36.000 0.00 0.00 0.00 2.87
4918 10639 5.816777 CCAAAAGCAACATTTCCAAGAAGAA 59.183 36.000 0.00 0.00 0.00 2.52
4919 10640 6.315891 CCAAAAGCAACATTTCCAAGAAGAAA 59.684 34.615 0.00 0.00 39.92 2.52
4920 10641 7.148272 CCAAAAGCAACATTTCCAAGAAGAAAA 60.148 33.333 0.00 0.00 39.11 2.29
4921 10642 6.908870 AAGCAACATTTCCAAGAAGAAAAC 57.091 33.333 0.00 0.00 39.11 2.43
4922 10643 5.976458 AGCAACATTTCCAAGAAGAAAACA 58.024 33.333 0.00 0.00 39.11 2.83
4923 10644 6.405538 AGCAACATTTCCAAGAAGAAAACAA 58.594 32.000 0.00 0.00 39.11 2.83
4924 10645 7.049754 AGCAACATTTCCAAGAAGAAAACAAT 58.950 30.769 0.00 0.00 39.11 2.71
4925 10646 7.011669 AGCAACATTTCCAAGAAGAAAACAATG 59.988 33.333 0.00 0.00 39.11 2.82
4926 10647 6.849588 ACATTTCCAAGAAGAAAACAATGC 57.150 33.333 0.00 0.00 39.11 3.56
4927 10648 5.463061 ACATTTCCAAGAAGAAAACAATGCG 59.537 36.000 0.00 0.00 39.11 4.73
4928 10649 3.011949 TCCAAGAAGAAAACAATGCGC 57.988 42.857 0.00 0.00 0.00 6.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.971598 CGAACCCACCCATGCCTCT 61.972 63.158 0.00 0.00 0.00 3.69
22 23 0.462047 CACCCATGGTAGCTCCGAAC 60.462 60.000 11.73 0.00 39.52 3.95
48 50 2.361610 CGAAGCCACCCATGCCTT 60.362 61.111 0.00 0.00 0.00 4.35
81 83 2.093869 CCAAAACTCATGCCTCCAATGG 60.094 50.000 0.00 0.00 0.00 3.16
85 87 0.482446 ACCCAAAACTCATGCCTCCA 59.518 50.000 0.00 0.00 0.00 3.86
165 275 5.126061 ACAAAACTCATGCTTCAAGTGTCTT 59.874 36.000 0.00 0.00 0.00 3.01
168 278 4.158394 ACACAAAACTCATGCTTCAAGTGT 59.842 37.500 0.00 0.00 0.00 3.55
171 281 5.179045 AGACACAAAACTCATGCTTCAAG 57.821 39.130 0.00 0.00 0.00 3.02
172 282 5.581126 AAGACACAAAACTCATGCTTCAA 57.419 34.783 0.00 0.00 0.00 2.69
173 283 5.125257 TGAAAGACACAAAACTCATGCTTCA 59.875 36.000 0.00 0.00 0.00 3.02
219 330 1.063183 TGTGTCCATCCATGTCACCA 58.937 50.000 0.00 0.00 33.21 4.17
230 341 1.077501 CCGGAAGCCATGTGTCCAT 60.078 57.895 0.00 0.00 0.00 3.41
236 347 2.672996 GCACACCGGAAGCCATGT 60.673 61.111 9.46 0.00 0.00 3.21
296 407 1.066152 CGTCATCGAGAGCTTGGATGA 59.934 52.381 16.60 16.60 42.99 2.92
328 439 7.413877 CGATTCTTCCTTCTCCTCTTCATTTTG 60.414 40.741 0.00 0.00 0.00 2.44
343 454 3.384789 TCATCCGATGACGATTCTTCCTT 59.615 43.478 7.00 0.00 42.66 3.36
376 499 1.142262 TGCCACATCATCATCCTCCTG 59.858 52.381 0.00 0.00 0.00 3.86
437 565 8.381636 TCAAAATCACCCAACCAAATTTATGAT 58.618 29.630 0.00 0.00 0.00 2.45
442 570 4.821260 GCTCAAAATCACCCAACCAAATTT 59.179 37.500 0.00 0.00 0.00 1.82
445 573 3.037549 AGCTCAAAATCACCCAACCAAA 58.962 40.909 0.00 0.00 0.00 3.28
464 593 5.346822 GCATAACTTAATTGCATGGCATAGC 59.653 40.000 0.00 7.31 38.76 2.97
482 611 4.878397 AGAGTTGGAGCAACATAGCATAAC 59.122 41.667 0.00 0.00 45.66 1.89
560 695 1.133664 CGGCGCTTGCAAATACGAA 59.866 52.632 17.38 0.00 41.71 3.85
563 698 2.579518 GCCGGCGCTTGCAAATAC 60.580 61.111 12.58 0.00 41.71 1.89
593 731 1.026718 AGCAGGCGCGCTAAATTTCT 61.027 50.000 32.29 14.85 45.49 2.52
718 861 1.070914 TCGCCCATCGCATTATTACCA 59.929 47.619 0.00 0.00 37.30 3.25
745 888 0.738389 ATAGGCGCGGGTTCAATTTG 59.262 50.000 8.83 0.00 0.00 2.32
767 910 6.071896 GCCTAAAAGAACTGGTAAGAGCATTT 60.072 38.462 0.00 0.00 0.00 2.32
772 915 4.817517 TCGCCTAAAAGAACTGGTAAGAG 58.182 43.478 0.00 0.00 0.00 2.85
773 916 4.877378 TCGCCTAAAAGAACTGGTAAGA 57.123 40.909 0.00 0.00 0.00 2.10
774 917 5.875359 AGAATCGCCTAAAAGAACTGGTAAG 59.125 40.000 0.00 0.00 0.00 2.34
775 918 5.801380 AGAATCGCCTAAAAGAACTGGTAA 58.199 37.500 0.00 0.00 0.00 2.85
776 919 5.416271 AGAATCGCCTAAAAGAACTGGTA 57.584 39.130 0.00 0.00 0.00 3.25
777 920 4.287766 AGAATCGCCTAAAAGAACTGGT 57.712 40.909 0.00 0.00 0.00 4.00
778 921 6.763610 AGAATAGAATCGCCTAAAAGAACTGG 59.236 38.462 0.00 0.00 0.00 4.00
779 922 7.778470 AGAATAGAATCGCCTAAAAGAACTG 57.222 36.000 0.00 0.00 0.00 3.16
780 923 9.699703 GATAGAATAGAATCGCCTAAAAGAACT 57.300 33.333 0.00 0.00 0.00 3.01
783 926 9.078990 TCTGATAGAATAGAATCGCCTAAAAGA 57.921 33.333 0.00 0.00 0.00 2.52
784 927 9.698309 TTCTGATAGAATAGAATCGCCTAAAAG 57.302 33.333 0.00 0.00 0.00 2.27
786 929 9.862371 GATTCTGATAGAATAGAATCGCCTAAA 57.138 33.333 10.18 0.00 44.41 1.85
793 936 6.045955 GGGGCGATTCTGATAGAATAGAATC 58.954 44.000 13.50 14.02 44.41 2.52
794 937 5.104735 GGGGGCGATTCTGATAGAATAGAAT 60.105 44.000 13.50 0.00 44.41 2.40
795 938 4.223032 GGGGGCGATTCTGATAGAATAGAA 59.777 45.833 13.50 0.00 44.41 2.10
796 939 3.769844 GGGGGCGATTCTGATAGAATAGA 59.230 47.826 13.50 0.00 44.41 1.98
797 940 3.515502 TGGGGGCGATTCTGATAGAATAG 59.484 47.826 4.19 5.82 44.41 1.73
798 941 3.516586 TGGGGGCGATTCTGATAGAATA 58.483 45.455 4.19 0.00 44.41 1.75
799 942 2.338809 TGGGGGCGATTCTGATAGAAT 58.661 47.619 3.86 3.86 46.84 2.40
800 943 1.801242 TGGGGGCGATTCTGATAGAA 58.199 50.000 0.00 0.00 38.78 2.10
801 944 1.902508 GATGGGGGCGATTCTGATAGA 59.097 52.381 0.00 0.00 0.00 1.98
802 945 1.065854 GGATGGGGGCGATTCTGATAG 60.066 57.143 0.00 0.00 0.00 2.08
803 946 0.984230 GGATGGGGGCGATTCTGATA 59.016 55.000 0.00 0.00 0.00 2.15
804 947 0.769776 AGGATGGGGGCGATTCTGAT 60.770 55.000 0.00 0.00 0.00 2.90
806 949 1.072159 GAGGATGGGGGCGATTCTG 59.928 63.158 0.00 0.00 0.00 3.02
807 950 0.988145 TTGAGGATGGGGGCGATTCT 60.988 55.000 0.00 0.00 0.00 2.40
809 952 1.227383 GTTGAGGATGGGGGCGATT 59.773 57.895 0.00 0.00 0.00 3.34
810 953 1.281925 AAGTTGAGGATGGGGGCGAT 61.282 55.000 0.00 0.00 0.00 4.58
811 954 1.497309 AAAGTTGAGGATGGGGGCGA 61.497 55.000 0.00 0.00 0.00 5.54
812 955 0.611896 AAAAGTTGAGGATGGGGGCG 60.612 55.000 0.00 0.00 0.00 6.13
814 957 2.310052 AGAGAAAAGTTGAGGATGGGGG 59.690 50.000 0.00 0.00 0.00 5.40
816 959 4.019860 TCTGAGAGAAAAGTTGAGGATGGG 60.020 45.833 0.00 0.00 0.00 4.00
818 961 6.877855 TGATTCTGAGAGAAAAGTTGAGGATG 59.122 38.462 0.00 0.00 37.82 3.51
819 962 7.013823 TGATTCTGAGAGAAAAGTTGAGGAT 57.986 36.000 0.00 0.00 37.82 3.24
820 963 6.425210 TGATTCTGAGAGAAAAGTTGAGGA 57.575 37.500 0.00 0.00 37.82 3.71
822 965 7.603404 AGTGATGATTCTGAGAGAAAAGTTGAG 59.397 37.037 0.00 0.00 37.82 3.02
823 966 7.448420 AGTGATGATTCTGAGAGAAAAGTTGA 58.552 34.615 0.00 0.00 37.82 3.18
824 967 7.603404 AGAGTGATGATTCTGAGAGAAAAGTTG 59.397 37.037 0.00 0.00 37.82 3.16
825 968 7.678837 AGAGTGATGATTCTGAGAGAAAAGTT 58.321 34.615 0.00 0.00 37.82 2.66
826 969 7.243604 AGAGTGATGATTCTGAGAGAAAAGT 57.756 36.000 0.00 0.00 37.82 2.66
830 973 9.585369 ACATATAGAGTGATGATTCTGAGAGAA 57.415 33.333 0.00 0.00 38.78 2.87
831 974 9.585369 AACATATAGAGTGATGATTCTGAGAGA 57.415 33.333 0.00 0.00 0.00 3.10
905 1048 7.402054 TGTAGGTCATGGTCACTTCATATTTT 58.598 34.615 0.00 0.00 0.00 1.82
906 1049 6.957631 TGTAGGTCATGGTCACTTCATATTT 58.042 36.000 0.00 0.00 0.00 1.40
907 1050 6.560003 TGTAGGTCATGGTCACTTCATATT 57.440 37.500 0.00 0.00 0.00 1.28
908 1051 6.239714 GGATGTAGGTCATGGTCACTTCATAT 60.240 42.308 0.00 0.00 36.83 1.78
909 1052 5.070446 GGATGTAGGTCATGGTCACTTCATA 59.930 44.000 0.00 0.00 36.83 2.15
910 1053 4.141620 GGATGTAGGTCATGGTCACTTCAT 60.142 45.833 0.00 0.00 36.83 2.57
911 1054 3.197766 GGATGTAGGTCATGGTCACTTCA 59.802 47.826 0.00 0.00 36.83 3.02
912 1055 3.738281 CGGATGTAGGTCATGGTCACTTC 60.738 52.174 0.00 0.00 36.83 3.01
913 1056 2.168521 CGGATGTAGGTCATGGTCACTT 59.831 50.000 0.00 0.00 36.83 3.16
914 1057 1.757118 CGGATGTAGGTCATGGTCACT 59.243 52.381 0.00 0.00 36.83 3.41
916 1059 0.464036 GCGGATGTAGGTCATGGTCA 59.536 55.000 0.00 0.00 36.83 4.02
917 1060 0.753262 AGCGGATGTAGGTCATGGTC 59.247 55.000 0.00 0.00 36.83 4.02
918 1061 0.753262 GAGCGGATGTAGGTCATGGT 59.247 55.000 0.00 0.00 36.83 3.55
919 1062 1.043816 AGAGCGGATGTAGGTCATGG 58.956 55.000 0.00 0.00 38.46 3.66
920 1063 2.623416 TGTAGAGCGGATGTAGGTCATG 59.377 50.000 0.00 0.00 38.46 3.07
921 1064 2.945456 TGTAGAGCGGATGTAGGTCAT 58.055 47.619 0.00 0.00 38.46 3.06
922 1065 2.426024 GTTGTAGAGCGGATGTAGGTCA 59.574 50.000 0.00 0.00 38.46 4.02
923 1066 2.426024 TGTTGTAGAGCGGATGTAGGTC 59.574 50.000 0.00 0.00 36.46 3.85
924 1067 2.453521 TGTTGTAGAGCGGATGTAGGT 58.546 47.619 0.00 0.00 0.00 3.08
925 1068 3.187700 GTTGTTGTAGAGCGGATGTAGG 58.812 50.000 0.00 0.00 0.00 3.18
1028 2779 2.359975 CTTCAGCGGAACACCCCC 60.360 66.667 0.00 0.00 0.00 5.40
1123 2875 2.562738 GAGGGGAAAAGTGATTGGGTTG 59.437 50.000 0.00 0.00 0.00 3.77
1130 2882 0.618981 GACGGGAGGGGAAAAGTGAT 59.381 55.000 0.00 0.00 0.00 3.06
1322 3086 3.777910 GTAAGGCGGAAGGGGCGA 61.778 66.667 0.00 0.00 37.59 5.54
1358 3122 3.699134 GATGTCCTTGGGGTCGGGC 62.699 68.421 0.00 0.00 0.00 6.13
1531 5371 1.006102 AGGTCGCAGAGGAACAACG 60.006 57.895 0.00 0.00 36.95 4.10
1947 5787 1.220206 CACCAAGGCATCGCTCTCT 59.780 57.895 0.00 0.00 0.00 3.10
1977 5817 2.432510 AGATCTCAAGGAATCGGACCAC 59.567 50.000 0.00 0.00 0.00 4.16
2036 5876 2.000701 CCAGTCCCCTGTGCCCATA 61.001 63.158 0.00 0.00 36.95 2.74
2039 5879 4.035102 GTCCAGTCCCCTGTGCCC 62.035 72.222 0.00 0.00 36.95 5.36
2050 5890 3.106054 AGCTGATGATCAAGAGTCCAGT 58.894 45.455 0.00 0.00 0.00 4.00
2361 6208 0.458669 TAGCAGTACAAGCTACGGGC 59.541 55.000 13.95 0.00 43.25 6.13
2377 6224 6.737254 TCCAAATAGCAAGTAAACACTAGC 57.263 37.500 0.00 0.00 0.00 3.42
2386 6233 8.783093 GCATGTACATTATCCAAATAGCAAGTA 58.217 33.333 5.37 0.00 0.00 2.24
2388 6235 7.806487 CAGCATGTACATTATCCAAATAGCAAG 59.194 37.037 5.37 0.00 0.00 4.01
2396 6244 5.192176 TGAAGCAGCATGTACATTATCCAA 58.808 37.500 5.37 0.00 39.31 3.53
2479 6333 4.166725 TGCCTGATAAAATGAGATGAGGGT 59.833 41.667 0.00 0.00 28.01 4.34
2483 6337 7.465353 TTGTTTGCCTGATAAAATGAGATGA 57.535 32.000 0.00 0.00 0.00 2.92
2498 6352 5.596836 TTCTTGACTGAATTTGTTTGCCT 57.403 34.783 0.00 0.00 0.00 4.75
2499 6353 6.849588 ATTTCTTGACTGAATTTGTTTGCC 57.150 33.333 0.00 0.00 0.00 4.52
2506 7568 6.638468 GCTCACGAAATTTCTTGACTGAATTT 59.362 34.615 20.09 0.00 32.83 1.82
2507 7569 6.145535 GCTCACGAAATTTCTTGACTGAATT 58.854 36.000 20.09 0.00 32.83 2.17
2650 7779 6.626302 CCTATAAGAGGCTAAGAGAAATCCG 58.374 44.000 0.00 0.00 38.96 4.18
2766 8342 4.046286 TCATTAACCACAAGCCCTCATT 57.954 40.909 0.00 0.00 0.00 2.57
2843 8423 2.094182 TGTGACCTCGAGCCAAGATAAC 60.094 50.000 6.99 0.00 0.00 1.89
2864 8444 4.620589 TTCCCAACATGTGCATCATTTT 57.379 36.364 0.00 0.00 34.09 1.82
3042 8638 7.938140 ACATACATGTAACAATTAAGCACCT 57.062 32.000 10.14 0.00 39.68 4.00
3082 8678 2.417933 GTCTAGTTCCGACGCTACTTGA 59.582 50.000 5.58 6.54 0.00 3.02
3614 9216 1.003355 ATGCCACCAGAACAGACCG 60.003 57.895 0.00 0.00 0.00 4.79
3765 9373 1.000394 TGAGAATCAGCGTTCCGTTCA 60.000 47.619 0.00 0.00 42.56 3.18
3917 9528 1.927527 ATCAGGCCAGGGCTCAACT 60.928 57.895 14.05 0.00 41.60 3.16
3932 9543 4.006780 TCAAGAGCAACAAGTAGCATCA 57.993 40.909 0.00 0.00 0.00 3.07
3960 9600 3.118334 TGTTGTCCTCCGGTAACAGAAAA 60.118 43.478 0.00 0.00 31.51 2.29
3961 9601 2.435069 TGTTGTCCTCCGGTAACAGAAA 59.565 45.455 0.00 0.00 31.51 2.52
3962 9602 2.036733 CTGTTGTCCTCCGGTAACAGAA 59.963 50.000 21.81 9.54 43.84 3.02
3967 9607 0.178926 TCCCTGTTGTCCTCCGGTAA 60.179 55.000 0.00 0.00 0.00 2.85
3970 9610 1.608717 CTCTCCCTGTTGTCCTCCGG 61.609 65.000 0.00 0.00 0.00 5.14
4098 9739 6.129393 CGCACGAGGATTATTAAAACATCAG 58.871 40.000 0.00 0.00 0.00 2.90
4130 9771 1.482182 AGAACAGCTACGATGCATCCA 59.518 47.619 20.87 8.20 34.99 3.41
4137 9778 1.899814 TCCCAACAGAACAGCTACGAT 59.100 47.619 0.00 0.00 0.00 3.73
4140 9781 1.807142 GCTTCCCAACAGAACAGCTAC 59.193 52.381 0.00 0.00 0.00 3.58
4141 9782 1.419762 TGCTTCCCAACAGAACAGCTA 59.580 47.619 0.00 0.00 0.00 3.32
4142 9783 0.183492 TGCTTCCCAACAGAACAGCT 59.817 50.000 0.00 0.00 0.00 4.24
4149 9844 0.324285 AGAGCTCTGCTTCCCAACAG 59.676 55.000 17.42 0.00 39.88 3.16
4160 9855 6.652481 TGGAAAGTCTAAAAATGAGAGCTCTG 59.348 38.462 23.91 3.78 0.00 3.35
4161 9856 6.652900 GTGGAAAGTCTAAAAATGAGAGCTCT 59.347 38.462 18.28 18.28 0.00 4.09
4162 9857 6.128145 GGTGGAAAGTCTAAAAATGAGAGCTC 60.128 42.308 5.27 5.27 0.00 4.09
4196 9891 1.879380 CAGCCAATCGACCAAAGACAA 59.121 47.619 0.00 0.00 0.00 3.18
4224 9919 1.325476 GCAAAGCCTCCATGGGGAAG 61.325 60.000 15.22 1.93 44.38 3.46
4283 9980 2.680841 CCAGGACAACACACGAAAAAGA 59.319 45.455 0.00 0.00 0.00 2.52
4284 9981 2.680841 TCCAGGACAACACACGAAAAAG 59.319 45.455 0.00 0.00 0.00 2.27
4285 9982 2.680841 CTCCAGGACAACACACGAAAAA 59.319 45.455 0.00 0.00 0.00 1.94
4286 9983 2.093394 TCTCCAGGACAACACACGAAAA 60.093 45.455 0.00 0.00 0.00 2.29
4287 9984 1.483004 TCTCCAGGACAACACACGAAA 59.517 47.619 0.00 0.00 0.00 3.46
4288 9985 1.068588 CTCTCCAGGACAACACACGAA 59.931 52.381 0.00 0.00 0.00 3.85
4289 9986 0.673985 CTCTCCAGGACAACACACGA 59.326 55.000 0.00 0.00 0.00 4.35
4290 9987 0.389391 ACTCTCCAGGACAACACACG 59.611 55.000 0.00 0.00 0.00 4.49
4307 10004 3.715628 ACAAATTCTGAAGCGCAAACT 57.284 38.095 11.47 0.00 0.00 2.66
4341 10038 4.214332 GCATGTTCCTCTCTTTCGTCTTTT 59.786 41.667 0.00 0.00 0.00 2.27
4346 10043 1.714794 CGCATGTTCCTCTCTTTCGT 58.285 50.000 0.00 0.00 0.00 3.85
4347 10044 0.371645 GCGCATGTTCCTCTCTTTCG 59.628 55.000 0.30 0.00 0.00 3.46
4348 10045 0.729690 GGCGCATGTTCCTCTCTTTC 59.270 55.000 10.83 0.00 0.00 2.62
4349 10046 0.326264 AGGCGCATGTTCCTCTCTTT 59.674 50.000 10.83 0.00 0.00 2.52
4350 10047 0.326264 AAGGCGCATGTTCCTCTCTT 59.674 50.000 10.83 0.00 0.00 2.85
4351 10048 0.392193 CAAGGCGCATGTTCCTCTCT 60.392 55.000 10.83 0.00 0.00 3.10
4352 10049 1.372087 CCAAGGCGCATGTTCCTCTC 61.372 60.000 10.83 0.00 0.00 3.20
4441 10162 0.035458 GAGCTATAATGGGCCGCAGT 59.965 55.000 0.00 0.00 0.00 4.40
4456 10177 3.660111 GGCAAAACGCACCGAGCT 61.660 61.111 0.00 0.00 45.17 4.09
4485 10206 9.654663 GAGAAAGAGCTAAAATACCTTAACTGA 57.345 33.333 0.00 0.00 0.00 3.41
4486 10207 9.436957 TGAGAAAGAGCTAAAATACCTTAACTG 57.563 33.333 0.00 0.00 0.00 3.16
4516 10237 6.569801 GCGAAGTCCAGCTAAAATACCTTTTT 60.570 38.462 0.00 0.00 36.09 1.94
4517 10238 5.106277 GCGAAGTCCAGCTAAAATACCTTTT 60.106 40.000 0.00 0.00 38.17 2.27
4518 10239 4.395231 GCGAAGTCCAGCTAAAATACCTTT 59.605 41.667 0.00 0.00 0.00 3.11
4519 10240 3.939592 GCGAAGTCCAGCTAAAATACCTT 59.060 43.478 0.00 0.00 0.00 3.50
4520 10241 3.197983 AGCGAAGTCCAGCTAAAATACCT 59.802 43.478 0.00 0.00 42.60 3.08
4521 10242 3.532542 AGCGAAGTCCAGCTAAAATACC 58.467 45.455 0.00 0.00 42.60 2.73
4529 10250 2.497675 TCTGAAATAGCGAAGTCCAGCT 59.502 45.455 0.00 0.00 46.53 4.24
4530 10251 2.605366 GTCTGAAATAGCGAAGTCCAGC 59.395 50.000 0.00 0.00 0.00 4.85
4531 10252 3.862267 CAGTCTGAAATAGCGAAGTCCAG 59.138 47.826 0.00 0.00 0.00 3.86
4532 10253 3.258372 ACAGTCTGAAATAGCGAAGTCCA 59.742 43.478 6.91 0.00 0.00 4.02
4533 10254 3.851098 ACAGTCTGAAATAGCGAAGTCC 58.149 45.455 6.91 0.00 0.00 3.85
4534 10255 5.847670 AAACAGTCTGAAATAGCGAAGTC 57.152 39.130 6.91 0.00 0.00 3.01
4535 10256 6.619801 AAAAACAGTCTGAAATAGCGAAGT 57.380 33.333 6.91 0.00 0.00 3.01
4566 10287 8.458843 GCAACAATGTGTGAGGTATTATTTAGT 58.541 33.333 0.00 0.00 0.00 2.24
4567 10288 7.639850 CGCAACAATGTGTGAGGTATTATTTAG 59.360 37.037 0.00 0.00 32.29 1.85
4568 10289 7.414651 CCGCAACAATGTGTGAGGTATTATTTA 60.415 37.037 9.03 0.00 35.21 1.40
4569 10290 6.321717 CGCAACAATGTGTGAGGTATTATTT 58.678 36.000 0.00 0.00 32.29 1.40
4570 10291 5.163663 CCGCAACAATGTGTGAGGTATTATT 60.164 40.000 9.03 0.00 35.21 1.40
4571 10292 4.335315 CCGCAACAATGTGTGAGGTATTAT 59.665 41.667 9.03 0.00 35.21 1.28
4572 10293 3.687212 CCGCAACAATGTGTGAGGTATTA 59.313 43.478 9.03 0.00 35.21 0.98
4573 10294 2.487762 CCGCAACAATGTGTGAGGTATT 59.512 45.455 9.03 0.00 35.21 1.89
4574 10295 2.083774 CCGCAACAATGTGTGAGGTAT 58.916 47.619 9.03 0.00 35.21 2.73
4575 10296 1.518325 CCGCAACAATGTGTGAGGTA 58.482 50.000 9.03 0.00 35.21 3.08
4576 10297 1.172180 CCCGCAACAATGTGTGAGGT 61.172 55.000 13.56 0.00 35.21 3.85
4577 10298 0.888736 TCCCGCAACAATGTGTGAGG 60.889 55.000 9.85 9.85 35.21 3.86
4578 10299 0.950836 TTCCCGCAACAATGTGTGAG 59.049 50.000 0.00 0.00 35.21 3.51
4579 10300 1.614996 ATTCCCGCAACAATGTGTGA 58.385 45.000 0.00 0.00 35.21 3.58
4580 10301 2.060284 CAATTCCCGCAACAATGTGTG 58.940 47.619 0.00 0.00 35.21 3.82
4581 10302 1.000731 CCAATTCCCGCAACAATGTGT 59.999 47.619 0.00 0.00 35.21 3.72
4582 10303 1.000731 ACCAATTCCCGCAACAATGTG 59.999 47.619 0.00 0.00 36.80 3.21
4583 10304 1.272212 GACCAATTCCCGCAACAATGT 59.728 47.619 0.00 0.00 0.00 2.71
4584 10305 1.732077 CGACCAATTCCCGCAACAATG 60.732 52.381 0.00 0.00 0.00 2.82
4585 10306 0.525761 CGACCAATTCCCGCAACAAT 59.474 50.000 0.00 0.00 0.00 2.71
4586 10307 0.535328 TCGACCAATTCCCGCAACAA 60.535 50.000 0.00 0.00 0.00 2.83
4587 10308 1.071642 TCGACCAATTCCCGCAACA 59.928 52.632 0.00 0.00 0.00 3.33
4588 10309 1.500396 GTCGACCAATTCCCGCAAC 59.500 57.895 3.51 0.00 0.00 4.17
4589 10310 2.030401 CGTCGACCAATTCCCGCAA 61.030 57.895 10.58 0.00 0.00 4.85
4590 10311 2.433491 CGTCGACCAATTCCCGCA 60.433 61.111 10.58 0.00 0.00 5.69
4591 10312 3.861263 GCGTCGACCAATTCCCGC 61.861 66.667 10.58 3.23 34.91 6.13
4592 10313 1.570347 TTTGCGTCGACCAATTCCCG 61.570 55.000 16.70 2.40 0.00 5.14
4593 10314 0.808755 ATTTGCGTCGACCAATTCCC 59.191 50.000 16.70 0.00 0.00 3.97
4594 10315 2.629639 AATTTGCGTCGACCAATTCC 57.370 45.000 16.70 0.00 0.00 3.01
4595 10316 2.661195 CCAAATTTGCGTCGACCAATTC 59.339 45.455 12.92 1.17 0.00 2.17
4596 10317 2.294791 TCCAAATTTGCGTCGACCAATT 59.705 40.909 12.92 12.59 0.00 2.32
4597 10318 1.883275 TCCAAATTTGCGTCGACCAAT 59.117 42.857 12.92 8.01 0.00 3.16
4598 10319 1.309950 TCCAAATTTGCGTCGACCAA 58.690 45.000 12.92 12.25 0.00 3.67
4599 10320 1.529226 ATCCAAATTTGCGTCGACCA 58.471 45.000 12.92 6.30 0.00 4.02
4600 10321 2.095466 TCAATCCAAATTTGCGTCGACC 60.095 45.455 12.92 3.43 0.00 4.79
4601 10322 3.196007 TCAATCCAAATTTGCGTCGAC 57.804 42.857 12.92 5.18 0.00 4.20
4602 10323 5.553290 TTATCAATCCAAATTTGCGTCGA 57.447 34.783 12.92 5.07 0.00 4.20
4603 10324 6.624710 TTTTATCAATCCAAATTTGCGTCG 57.375 33.333 12.92 0.00 0.00 5.12
4604 10325 8.183830 TCATTTTATCAATCCAAATTTGCGTC 57.816 30.769 12.92 0.00 0.00 5.19
4605 10326 8.034215 TCTCATTTTATCAATCCAAATTTGCGT 58.966 29.630 12.92 0.28 0.00 5.24
4606 10327 8.410030 TCTCATTTTATCAATCCAAATTTGCG 57.590 30.769 12.92 6.50 0.00 4.85
4607 10328 9.977762 GTTCTCATTTTATCAATCCAAATTTGC 57.022 29.630 12.92 0.00 0.00 3.68
4704 10425 8.997621 AGTGTAATTGGTATATTCGCGATATT 57.002 30.769 10.88 0.03 33.09 1.28
4705 10426 8.248253 TGAGTGTAATTGGTATATTCGCGATAT 58.752 33.333 10.88 12.42 35.19 1.63
4706 10427 7.595604 TGAGTGTAATTGGTATATTCGCGATA 58.404 34.615 10.88 5.11 0.00 2.92
4707 10428 6.452242 TGAGTGTAATTGGTATATTCGCGAT 58.548 36.000 10.88 2.60 0.00 4.58
4708 10429 5.834169 TGAGTGTAATTGGTATATTCGCGA 58.166 37.500 3.71 3.71 0.00 5.87
4709 10430 5.690409 ACTGAGTGTAATTGGTATATTCGCG 59.310 40.000 0.00 0.00 0.00 5.87
4710 10431 6.924060 AGACTGAGTGTAATTGGTATATTCGC 59.076 38.462 0.00 0.00 0.00 4.70
4711 10432 8.353684 AGAGACTGAGTGTAATTGGTATATTCG 58.646 37.037 0.00 0.00 0.00 3.34
4712 10433 9.469807 CAGAGACTGAGTGTAATTGGTATATTC 57.530 37.037 0.00 0.00 32.44 1.75
4713 10434 7.928706 GCAGAGACTGAGTGTAATTGGTATATT 59.071 37.037 0.00 0.00 32.44 1.28
4714 10435 7.069950 TGCAGAGACTGAGTGTAATTGGTATAT 59.930 37.037 0.00 0.00 32.44 0.86
4715 10436 6.379988 TGCAGAGACTGAGTGTAATTGGTATA 59.620 38.462 0.00 0.00 32.44 1.47
4716 10437 5.187772 TGCAGAGACTGAGTGTAATTGGTAT 59.812 40.000 0.00 0.00 32.44 2.73
4717 10438 4.526650 TGCAGAGACTGAGTGTAATTGGTA 59.473 41.667 0.00 0.00 32.44 3.25
4718 10439 3.324846 TGCAGAGACTGAGTGTAATTGGT 59.675 43.478 0.00 0.00 32.44 3.67
4719 10440 3.681897 GTGCAGAGACTGAGTGTAATTGG 59.318 47.826 0.00 0.00 32.44 3.16
4720 10441 3.681897 GGTGCAGAGACTGAGTGTAATTG 59.318 47.826 0.00 0.00 32.44 2.32
4721 10442 3.324846 TGGTGCAGAGACTGAGTGTAATT 59.675 43.478 0.00 0.00 32.44 1.40
4722 10443 2.899900 TGGTGCAGAGACTGAGTGTAAT 59.100 45.455 0.00 0.00 32.44 1.89
4723 10444 2.316108 TGGTGCAGAGACTGAGTGTAA 58.684 47.619 0.00 0.00 32.44 2.41
4724 10445 1.995376 TGGTGCAGAGACTGAGTGTA 58.005 50.000 0.00 0.00 32.44 2.90
4725 10446 1.123077 TTGGTGCAGAGACTGAGTGT 58.877 50.000 0.00 0.00 32.44 3.55
4726 10447 1.202568 TGTTGGTGCAGAGACTGAGTG 60.203 52.381 0.00 0.00 32.44 3.51
4727 10448 1.123077 TGTTGGTGCAGAGACTGAGT 58.877 50.000 2.81 0.00 32.44 3.41
4728 10449 2.141517 CTTGTTGGTGCAGAGACTGAG 58.858 52.381 2.81 0.00 32.44 3.35
4729 10450 1.762370 TCTTGTTGGTGCAGAGACTGA 59.238 47.619 2.81 0.00 32.44 3.41
4730 10451 2.245159 TCTTGTTGGTGCAGAGACTG 57.755 50.000 0.00 0.00 34.12 3.51
4731 10452 2.105477 ACATCTTGTTGGTGCAGAGACT 59.895 45.455 0.00 0.00 0.00 3.24
4732 10453 2.481952 GACATCTTGTTGGTGCAGAGAC 59.518 50.000 0.00 0.00 0.00 3.36
4733 10454 2.550855 GGACATCTTGTTGGTGCAGAGA 60.551 50.000 0.00 0.00 0.00 3.10
4734 10455 1.808945 GGACATCTTGTTGGTGCAGAG 59.191 52.381 0.00 0.00 0.00 3.35
4735 10456 1.142667 TGGACATCTTGTTGGTGCAGA 59.857 47.619 0.00 0.00 0.00 4.26
4736 10457 1.608055 TGGACATCTTGTTGGTGCAG 58.392 50.000 0.00 0.00 0.00 4.41
4737 10458 2.064434 TTGGACATCTTGTTGGTGCA 57.936 45.000 0.00 0.00 0.00 4.57
4738 10459 2.622942 TCTTTGGACATCTTGTTGGTGC 59.377 45.455 0.00 0.00 0.00 5.01
4739 10460 3.631686 TGTCTTTGGACATCTTGTTGGTG 59.368 43.478 0.00 0.00 46.19 4.17
4740 10461 3.897239 TGTCTTTGGACATCTTGTTGGT 58.103 40.909 0.00 0.00 46.19 3.67
4751 10472 4.937620 TGTGCATCTCTAATGTCTTTGGAC 59.062 41.667 0.00 0.00 42.42 4.02
4752 10473 4.937620 GTGTGCATCTCTAATGTCTTTGGA 59.062 41.667 0.00 0.00 0.00 3.53
4753 10474 4.696877 TGTGTGCATCTCTAATGTCTTTGG 59.303 41.667 0.00 0.00 0.00 3.28
4754 10475 5.868043 TGTGTGCATCTCTAATGTCTTTG 57.132 39.130 0.00 0.00 0.00 2.77
4755 10476 5.182001 GGTTGTGTGCATCTCTAATGTCTTT 59.818 40.000 0.00 0.00 0.00 2.52
4756 10477 4.697352 GGTTGTGTGCATCTCTAATGTCTT 59.303 41.667 0.00 0.00 0.00 3.01
4757 10478 4.256920 GGTTGTGTGCATCTCTAATGTCT 58.743 43.478 0.00 0.00 0.00 3.41
4758 10479 4.002982 TGGTTGTGTGCATCTCTAATGTC 58.997 43.478 0.00 0.00 0.00 3.06
4759 10480 4.019792 TGGTTGTGTGCATCTCTAATGT 57.980 40.909 0.00 0.00 0.00 2.71
4760 10481 4.696877 TCTTGGTTGTGTGCATCTCTAATG 59.303 41.667 0.00 0.00 0.00 1.90
4761 10482 4.910195 TCTTGGTTGTGTGCATCTCTAAT 58.090 39.130 0.00 0.00 0.00 1.73
4762 10483 4.350368 TCTTGGTTGTGTGCATCTCTAA 57.650 40.909 0.00 0.00 0.00 2.10
4763 10484 4.350368 TTCTTGGTTGTGTGCATCTCTA 57.650 40.909 0.00 0.00 0.00 2.43
4764 10485 2.936919 TCTTGGTTGTGTGCATCTCT 57.063 45.000 0.00 0.00 0.00 3.10
4765 10486 3.988379 TTTCTTGGTTGTGTGCATCTC 57.012 42.857 0.00 0.00 0.00 2.75
4766 10487 4.734398 TTTTTCTTGGTTGTGTGCATCT 57.266 36.364 0.00 0.00 0.00 2.90
4791 10512 8.851145 GGGTCTTGTTCTCTTTTTATCTCTTTT 58.149 33.333 0.00 0.00 0.00 2.27
4792 10513 7.173390 CGGGTCTTGTTCTCTTTTTATCTCTTT 59.827 37.037 0.00 0.00 0.00 2.52
4793 10514 6.651225 CGGGTCTTGTTCTCTTTTTATCTCTT 59.349 38.462 0.00 0.00 0.00 2.85
4794 10515 6.166982 CGGGTCTTGTTCTCTTTTTATCTCT 58.833 40.000 0.00 0.00 0.00 3.10
4795 10516 5.932883 ACGGGTCTTGTTCTCTTTTTATCTC 59.067 40.000 0.00 0.00 0.00 2.75
4796 10517 5.866207 ACGGGTCTTGTTCTCTTTTTATCT 58.134 37.500 0.00 0.00 0.00 1.98
4797 10518 5.163982 CGACGGGTCTTGTTCTCTTTTTATC 60.164 44.000 0.00 0.00 0.00 1.75
4798 10519 4.689345 CGACGGGTCTTGTTCTCTTTTTAT 59.311 41.667 0.00 0.00 0.00 1.40
4799 10520 4.053295 CGACGGGTCTTGTTCTCTTTTTA 58.947 43.478 0.00 0.00 0.00 1.52
4800 10521 2.870411 CGACGGGTCTTGTTCTCTTTTT 59.130 45.455 0.00 0.00 0.00 1.94
4801 10522 2.480845 CGACGGGTCTTGTTCTCTTTT 58.519 47.619 0.00 0.00 0.00 2.27
4802 10523 1.872653 GCGACGGGTCTTGTTCTCTTT 60.873 52.381 0.00 0.00 0.00 2.52
4803 10524 0.319641 GCGACGGGTCTTGTTCTCTT 60.320 55.000 0.00 0.00 0.00 2.85
4804 10525 1.289380 GCGACGGGTCTTGTTCTCT 59.711 57.895 0.00 0.00 0.00 3.10
4805 10526 2.087009 CGCGACGGGTCTTGTTCTC 61.087 63.158 0.00 0.00 0.00 2.87
4806 10527 1.874345 ATCGCGACGGGTCTTGTTCT 61.874 55.000 12.93 0.00 0.00 3.01
4807 10528 1.411493 GATCGCGACGGGTCTTGTTC 61.411 60.000 12.93 0.00 0.00 3.18
4808 10529 1.445582 GATCGCGACGGGTCTTGTT 60.446 57.895 12.93 0.00 0.00 2.83
4809 10530 1.945354 ATGATCGCGACGGGTCTTGT 61.945 55.000 12.93 0.00 0.00 3.16
4810 10531 1.226974 ATGATCGCGACGGGTCTTG 60.227 57.895 12.93 0.00 0.00 3.02
4811 10532 1.226974 CATGATCGCGACGGGTCTT 60.227 57.895 12.93 0.00 0.00 3.01
4812 10533 1.663379 TTCATGATCGCGACGGGTCT 61.663 55.000 12.93 0.00 0.00 3.85
4813 10534 1.226859 TTCATGATCGCGACGGGTC 60.227 57.895 12.93 5.56 0.00 4.46
4814 10535 1.518572 GTTCATGATCGCGACGGGT 60.519 57.895 12.93 0.00 0.00 5.28
4815 10536 2.237751 GGTTCATGATCGCGACGGG 61.238 63.158 12.93 5.41 0.00 5.28
4816 10537 1.518352 TGGTTCATGATCGCGACGG 60.518 57.895 12.93 0.63 0.00 4.79
4817 10538 0.802222 AGTGGTTCATGATCGCGACG 60.802 55.000 12.93 0.00 0.00 5.12
4818 10539 0.924090 GAGTGGTTCATGATCGCGAC 59.076 55.000 12.93 6.32 0.00 5.19
4819 10540 0.525455 CGAGTGGTTCATGATCGCGA 60.525 55.000 13.09 13.09 0.00 5.87
4820 10541 1.920051 CGAGTGGTTCATGATCGCG 59.080 57.895 0.00 0.00 0.00 5.87
4822 10543 1.061131 GTTGCGAGTGGTTCATGATCG 59.939 52.381 10.56 10.56 36.51 3.69
4823 10544 2.076100 TGTTGCGAGTGGTTCATGATC 58.924 47.619 0.00 0.00 0.00 2.92
4824 10545 2.079158 CTGTTGCGAGTGGTTCATGAT 58.921 47.619 0.00 0.00 0.00 2.45
4825 10546 1.511850 CTGTTGCGAGTGGTTCATGA 58.488 50.000 0.00 0.00 0.00 3.07
4826 10547 0.110056 GCTGTTGCGAGTGGTTCATG 60.110 55.000 0.00 0.00 0.00 3.07
4827 10548 0.534877 TGCTGTTGCGAGTGGTTCAT 60.535 50.000 0.00 0.00 43.34 2.57
4828 10549 1.153269 TGCTGTTGCGAGTGGTTCA 60.153 52.632 0.00 0.00 43.34 3.18
4829 10550 1.571460 CTGCTGTTGCGAGTGGTTC 59.429 57.895 0.00 0.00 43.34 3.62
4830 10551 2.546494 GCTGCTGTTGCGAGTGGTT 61.546 57.895 0.00 0.00 43.34 3.67
4831 10552 2.974698 GCTGCTGTTGCGAGTGGT 60.975 61.111 0.00 0.00 43.34 4.16
4832 10553 2.974148 TGCTGCTGTTGCGAGTGG 60.974 61.111 0.00 0.00 43.34 4.00
4833 10554 2.167808 GAGTGCTGCTGTTGCGAGTG 62.168 60.000 0.00 0.00 43.34 3.51
4834 10555 1.958205 GAGTGCTGCTGTTGCGAGT 60.958 57.895 0.00 0.00 43.34 4.18
4835 10556 0.389037 TAGAGTGCTGCTGTTGCGAG 60.389 55.000 0.00 0.00 43.34 5.03
4836 10557 0.033366 TTAGAGTGCTGCTGTTGCGA 59.967 50.000 0.00 0.00 43.34 5.10
4837 10558 0.164647 GTTAGAGTGCTGCTGTTGCG 59.835 55.000 0.00 0.00 43.34 4.85
4838 10559 0.519077 GGTTAGAGTGCTGCTGTTGC 59.481 55.000 0.00 0.00 40.20 4.17
4839 10560 1.532868 GTGGTTAGAGTGCTGCTGTTG 59.467 52.381 0.00 0.00 0.00 3.33
4840 10561 1.417890 AGTGGTTAGAGTGCTGCTGTT 59.582 47.619 0.00 0.00 0.00 3.16
4841 10562 1.051812 AGTGGTTAGAGTGCTGCTGT 58.948 50.000 0.00 0.00 0.00 4.40
4842 10563 2.232452 AGTAGTGGTTAGAGTGCTGCTG 59.768 50.000 0.00 0.00 0.00 4.41
4843 10564 2.232452 CAGTAGTGGTTAGAGTGCTGCT 59.768 50.000 0.00 0.00 0.00 4.24
4844 10565 2.231478 TCAGTAGTGGTTAGAGTGCTGC 59.769 50.000 0.00 0.00 31.13 5.25
4845 10566 4.218635 TCTTCAGTAGTGGTTAGAGTGCTG 59.781 45.833 0.00 0.00 32.02 4.41
4846 10567 4.218852 GTCTTCAGTAGTGGTTAGAGTGCT 59.781 45.833 0.00 0.00 0.00 4.40
4847 10568 4.022242 TGTCTTCAGTAGTGGTTAGAGTGC 60.022 45.833 0.00 0.00 0.00 4.40
4848 10569 5.707242 TGTCTTCAGTAGTGGTTAGAGTG 57.293 43.478 0.00 0.00 0.00 3.51
4849 10570 6.016108 GTCTTGTCTTCAGTAGTGGTTAGAGT 60.016 42.308 0.00 0.00 0.00 3.24
4850 10571 6.383415 GTCTTGTCTTCAGTAGTGGTTAGAG 58.617 44.000 0.00 0.00 0.00 2.43
4851 10572 5.243283 GGTCTTGTCTTCAGTAGTGGTTAGA 59.757 44.000 0.00 0.00 0.00 2.10
4852 10573 5.471257 GGTCTTGTCTTCAGTAGTGGTTAG 58.529 45.833 0.00 0.00 0.00 2.34
4853 10574 4.282703 GGGTCTTGTCTTCAGTAGTGGTTA 59.717 45.833 0.00 0.00 0.00 2.85
4854 10575 3.071167 GGGTCTTGTCTTCAGTAGTGGTT 59.929 47.826 0.00 0.00 0.00 3.67
4855 10576 2.633481 GGGTCTTGTCTTCAGTAGTGGT 59.367 50.000 0.00 0.00 0.00 4.16
4856 10577 2.632996 TGGGTCTTGTCTTCAGTAGTGG 59.367 50.000 0.00 0.00 0.00 4.00
4857 10578 4.336889 TTGGGTCTTGTCTTCAGTAGTG 57.663 45.455 0.00 0.00 0.00 2.74
4858 10579 4.409247 AGTTTGGGTCTTGTCTTCAGTAGT 59.591 41.667 0.00 0.00 0.00 2.73
4859 10580 4.962155 AGTTTGGGTCTTGTCTTCAGTAG 58.038 43.478 0.00 0.00 0.00 2.57
4860 10581 5.364446 TGTAGTTTGGGTCTTGTCTTCAGTA 59.636 40.000 0.00 0.00 0.00 2.74
4861 10582 3.933861 AGTTTGGGTCTTGTCTTCAGT 57.066 42.857 0.00 0.00 0.00 3.41
4862 10583 4.703897 TGTAGTTTGGGTCTTGTCTTCAG 58.296 43.478 0.00 0.00 0.00 3.02
4863 10584 4.764050 TGTAGTTTGGGTCTTGTCTTCA 57.236 40.909 0.00 0.00 0.00 3.02
4864 10585 5.365619 TCTTGTAGTTTGGGTCTTGTCTTC 58.634 41.667 0.00 0.00 0.00 2.87
4865 10586 5.130477 TCTCTTGTAGTTTGGGTCTTGTCTT 59.870 40.000 0.00 0.00 0.00 3.01
4866 10587 4.654262 TCTCTTGTAGTTTGGGTCTTGTCT 59.346 41.667 0.00 0.00 0.00 3.41
4867 10588 4.957296 TCTCTTGTAGTTTGGGTCTTGTC 58.043 43.478 0.00 0.00 0.00 3.18
4868 10589 5.568620 ATCTCTTGTAGTTTGGGTCTTGT 57.431 39.130 0.00 0.00 0.00 3.16
4869 10590 6.884280 AAATCTCTTGTAGTTTGGGTCTTG 57.116 37.500 0.00 0.00 0.00 3.02
4870 10591 6.490381 GGAAAATCTCTTGTAGTTTGGGTCTT 59.510 38.462 0.00 0.00 0.00 3.01
4871 10592 6.004574 GGAAAATCTCTTGTAGTTTGGGTCT 58.995 40.000 0.00 0.00 0.00 3.85
4872 10593 5.768164 TGGAAAATCTCTTGTAGTTTGGGTC 59.232 40.000 0.00 0.00 0.00 4.46
4873 10594 5.701224 TGGAAAATCTCTTGTAGTTTGGGT 58.299 37.500 0.00 0.00 0.00 4.51
4874 10595 6.648879 TTGGAAAATCTCTTGTAGTTTGGG 57.351 37.500 0.00 0.00 0.00 4.12
4875 10596 7.169813 GCTTTTGGAAAATCTCTTGTAGTTTGG 59.830 37.037 0.00 0.00 0.00 3.28
4876 10597 7.706179 TGCTTTTGGAAAATCTCTTGTAGTTTG 59.294 33.333 0.00 0.00 0.00 2.93
4877 10598 7.781056 TGCTTTTGGAAAATCTCTTGTAGTTT 58.219 30.769 0.00 0.00 0.00 2.66
4878 10599 7.346751 TGCTTTTGGAAAATCTCTTGTAGTT 57.653 32.000 0.00 0.00 0.00 2.24
4879 10600 6.959639 TGCTTTTGGAAAATCTCTTGTAGT 57.040 33.333 0.00 0.00 0.00 2.73
4880 10601 7.202526 TGTTGCTTTTGGAAAATCTCTTGTAG 58.797 34.615 0.00 0.00 0.00 2.74
4881 10602 7.106439 TGTTGCTTTTGGAAAATCTCTTGTA 57.894 32.000 0.00 0.00 0.00 2.41
4882 10603 5.976458 TGTTGCTTTTGGAAAATCTCTTGT 58.024 33.333 0.00 0.00 0.00 3.16
4883 10604 7.486802 AATGTTGCTTTTGGAAAATCTCTTG 57.513 32.000 0.00 0.00 26.94 3.02
4884 10605 7.227314 GGAAATGTTGCTTTTGGAAAATCTCTT 59.773 33.333 0.00 0.00 26.94 2.85
4885 10606 6.707608 GGAAATGTTGCTTTTGGAAAATCTCT 59.292 34.615 0.00 0.00 26.94 3.10
4886 10607 6.482973 TGGAAATGTTGCTTTTGGAAAATCTC 59.517 34.615 0.00 0.00 26.94 2.75
4887 10608 6.355747 TGGAAATGTTGCTTTTGGAAAATCT 58.644 32.000 0.00 0.00 26.94 2.40
4888 10609 6.616774 TGGAAATGTTGCTTTTGGAAAATC 57.383 33.333 0.00 0.00 26.94 2.17
4889 10610 6.827762 TCTTGGAAATGTTGCTTTTGGAAAAT 59.172 30.769 0.00 0.00 0.00 1.82
4890 10611 6.176183 TCTTGGAAATGTTGCTTTTGGAAAA 58.824 32.000 0.00 0.00 0.00 2.29
4891 10612 5.738909 TCTTGGAAATGTTGCTTTTGGAAA 58.261 33.333 0.00 0.00 0.00 3.13
4892 10613 5.350504 TCTTGGAAATGTTGCTTTTGGAA 57.649 34.783 0.00 0.00 0.00 3.53
4893 10614 5.128499 TCTTCTTGGAAATGTTGCTTTTGGA 59.872 36.000 0.00 0.00 0.00 3.53
4894 10615 5.358922 TCTTCTTGGAAATGTTGCTTTTGG 58.641 37.500 0.00 0.00 0.00 3.28
4895 10616 6.907206 TTCTTCTTGGAAATGTTGCTTTTG 57.093 33.333 0.00 0.00 0.00 2.44
4896 10617 7.390162 TGTTTTCTTCTTGGAAATGTTGCTTTT 59.610 29.630 0.00 0.00 35.51 2.27
4897 10618 6.878389 TGTTTTCTTCTTGGAAATGTTGCTTT 59.122 30.769 0.00 0.00 35.51 3.51
4898 10619 6.405538 TGTTTTCTTCTTGGAAATGTTGCTT 58.594 32.000 0.00 0.00 35.51 3.91
4899 10620 5.976458 TGTTTTCTTCTTGGAAATGTTGCT 58.024 33.333 0.00 0.00 35.51 3.91
4900 10621 6.660887 TTGTTTTCTTCTTGGAAATGTTGC 57.339 33.333 0.00 0.00 35.51 4.17
4901 10622 7.127686 GCATTGTTTTCTTCTTGGAAATGTTG 58.872 34.615 0.00 0.00 35.51 3.33
4902 10623 6.018832 CGCATTGTTTTCTTCTTGGAAATGTT 60.019 34.615 0.00 0.00 35.51 2.71
4903 10624 5.463061 CGCATTGTTTTCTTCTTGGAAATGT 59.537 36.000 0.00 0.00 35.51 2.71
4904 10625 5.613142 GCGCATTGTTTTCTTCTTGGAAATG 60.613 40.000 0.30 0.00 35.51 2.32
4905 10626 4.448732 GCGCATTGTTTTCTTCTTGGAAAT 59.551 37.500 0.30 0.00 35.51 2.17
4906 10627 3.801594 GCGCATTGTTTTCTTCTTGGAAA 59.198 39.130 0.30 0.00 33.98 3.13
4907 10628 3.380142 GCGCATTGTTTTCTTCTTGGAA 58.620 40.909 0.30 0.00 0.00 3.53
4908 10629 3.011949 GCGCATTGTTTTCTTCTTGGA 57.988 42.857 0.30 0.00 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.