Multiple sequence alignment - TraesCS3A01G166100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G166100 chr3A 100.000 8824 0 0 1 8824 171032812 171041635 0.000000e+00 16295.0
1 TraesCS3A01G166100 chr3A 90.263 647 55 6 3709 4350 507056756 507057399 0.000000e+00 839.0
2 TraesCS3A01G166100 chr3A 98.276 174 3 0 6977 7150 28129207 28129034 1.110000e-78 305.0
3 TraesCS3A01G166100 chr3A 98.266 173 3 0 6977 7149 678054 677882 4.000000e-78 303.0
4 TraesCS3A01G166100 chr3A 83.824 136 19 2 8500 8635 11941022 11940890 9.300000e-25 126.0
5 TraesCS3A01G166100 chr3A 78.947 171 31 5 8026 8195 519830412 519830578 2.600000e-20 111.0
6 TraesCS3A01G166100 chr3A 86.598 97 13 0 2064 2160 726326339 726326435 3.370000e-19 108.0
7 TraesCS3A01G166100 chr3B 91.041 1585 104 27 2155 3720 228510876 228509311 0.000000e+00 2106.0
8 TraesCS3A01G166100 chr3B 83.800 1963 183 47 4438 6301 228509331 228507405 0.000000e+00 1738.0
9 TraesCS3A01G166100 chr3B 94.747 1085 43 4 876 1954 228512208 228511132 0.000000e+00 1676.0
10 TraesCS3A01G166100 chr3B 86.622 598 56 14 267 861 228512852 228512276 2.690000e-179 640.0
11 TraesCS3A01G166100 chr3B 88.022 359 34 5 7206 7556 228506051 228505694 4.930000e-112 416.0
12 TraesCS3A01G166100 chr3B 89.032 155 16 1 6823 6977 228506410 228506257 3.250000e-44 191.0
13 TraesCS3A01G166100 chr3B 82.119 151 26 1 8026 8176 526191692 526191543 2.590000e-25 128.0
14 TraesCS3A01G166100 chr3B 87.912 91 9 2 2071 2160 189918637 189918548 1.210000e-18 106.0
15 TraesCS3A01G166100 chr3D 95.279 1038 29 7 929 1954 157353235 157352206 0.000000e+00 1628.0
16 TraesCS3A01G166100 chr3D 86.088 1337 124 22 4829 6121 157347843 157346525 0.000000e+00 1382.0
17 TraesCS3A01G166100 chr3D 90.775 813 62 6 6169 6977 157346524 157345721 0.000000e+00 1074.0
18 TraesCS3A01G166100 chr3D 89.667 842 64 9 7150 7972 157345730 157344893 0.000000e+00 1051.0
19 TraesCS3A01G166100 chr3D 81.882 999 137 28 2717 3695 157349277 157348303 0.000000e+00 802.0
20 TraesCS3A01G166100 chr3D 86.257 684 66 16 191 861 157353989 157353321 0.000000e+00 717.0
21 TraesCS3A01G166100 chr3D 91.434 537 23 8 8300 8818 157343877 157343346 0.000000e+00 715.0
22 TraesCS3A01G166100 chr3D 93.072 332 22 1 4499 4829 157348216 157347885 1.330000e-132 484.0
23 TraesCS3A01G166100 chr3D 86.777 363 31 8 2155 2510 157352029 157351677 1.070000e-103 388.0
24 TraesCS3A01G166100 chr3D 93.878 196 10 1 1 194 398780178 398780373 2.410000e-75 294.0
25 TraesCS3A01G166100 chr3D 88.442 199 19 4 8106 8303 157344137 157343942 4.120000e-58 237.0
26 TraesCS3A01G166100 chr3D 92.994 157 9 1 7959 8115 157344358 157344204 2.480000e-55 228.0
27 TraesCS3A01G166100 chr3D 80.117 171 31 3 8026 8195 400503757 400503589 3.340000e-24 124.0
28 TraesCS3A01G166100 chr3D 81.452 124 12 6 8063 8176 477850485 477850363 3.390000e-14 91.6
29 TraesCS3A01G166100 chr3D 80.800 125 11 8 8063 8176 437538477 437538355 1.580000e-12 86.1
30 TraesCS3A01G166100 chr3D 80.000 125 12 8 8063 8176 488199957 488199835 7.340000e-11 80.5
31 TraesCS3A01G166100 chr3D 100.000 36 0 0 875 910 157353261 157353226 5.720000e-07 67.6
32 TraesCS3A01G166100 chr5B 92.575 633 41 3 3709 4335 311547248 311547880 0.000000e+00 904.0
33 TraesCS3A01G166100 chr5B 89.655 87 7 2 2070 2155 565501407 565501492 9.370000e-20 110.0
34 TraesCS3A01G166100 chr4D 91.938 645 44 5 3709 4346 454815524 454814881 0.000000e+00 896.0
35 TraesCS3A01G166100 chr4D 93.651 189 11 1 6964 7152 10250158 10249971 1.880000e-71 281.0
36 TraesCS3A01G166100 chr4D 92.593 189 14 0 6966 7154 468422885 468422697 1.130000e-68 272.0
37 TraesCS3A01G166100 chr4D 93.296 179 11 1 6977 7155 329878605 329878782 6.790000e-66 263.0
38 TraesCS3A01G166100 chr4D 84.252 127 9 6 8505 8620 170225913 170226039 7.240000e-21 113.0
39 TraesCS3A01G166100 chr4D 82.734 139 13 4 8505 8632 296729405 296729543 7.240000e-21 113.0
40 TraesCS3A01G166100 chr4D 78.723 141 12 15 8051 8176 292975291 292975154 2.640000e-10 78.7
41 TraesCS3A01G166100 chr4D 88.889 54 6 0 8549 8602 53750441 53750388 5.720000e-07 67.6
42 TraesCS3A01G166100 chr4D 76.812 138 17 10 8051 8176 235106886 235107020 7.400000e-06 63.9
43 TraesCS3A01G166100 chr4D 76.800 125 15 11 8063 8176 336022515 336022636 3.440000e-04 58.4
44 TraesCS3A01G166100 chr2D 91.049 648 51 6 3709 4351 619938230 619938875 0.000000e+00 869.0
45 TraesCS3A01G166100 chr2D 95.767 189 6 1 1 187 419379110 419378922 4.000000e-78 303.0
46 TraesCS3A01G166100 chr2D 95.745 188 6 1 1 186 582367019 582366832 1.440000e-77 302.0
47 TraesCS3A01G166100 chr2D 96.067 178 7 0 6977 7154 323517494 323517317 3.120000e-74 291.0
48 TraesCS3A01G166100 chr2D 79.128 321 45 10 3371 3689 422605532 422605232 1.500000e-47 202.0
49 TraesCS3A01G166100 chr2D 85.393 178 24 2 8017 8193 33880832 33880656 5.440000e-42 183.0
50 TraesCS3A01G166100 chr2D 84.892 139 21 0 8306 8444 624665559 624665421 3.320000e-29 141.0
51 TraesCS3A01G166100 chr2D 87.097 93 9 3 2071 2161 184841464 184841373 1.570000e-17 102.0
52 TraesCS3A01G166100 chr6B 90.060 664 58 5 3708 4364 707334349 707335011 0.000000e+00 854.0
53 TraesCS3A01G166100 chr6B 81.633 147 15 5 8505 8640 617176593 617176738 2.600000e-20 111.0
54 TraesCS3A01G166100 chr6B 86.408 103 10 3 2068 2168 12535597 12535697 9.370000e-20 110.0
55 TraesCS3A01G166100 chr6A 90.263 647 55 4 3712 4350 144096180 144095534 0.000000e+00 839.0
56 TraesCS3A01G166100 chr6A 97.727 176 3 1 6977 7152 63210478 63210304 1.440000e-77 302.0
57 TraesCS3A01G166100 chr6A 89.773 88 7 2 2069 2155 177807452 177807538 2.600000e-20 111.0
58 TraesCS3A01G166100 chr6A 80.952 147 16 5 8505 8640 555729202 555729347 1.210000e-18 106.0
59 TraesCS3A01G166100 chr6A 79.839 124 13 9 8063 8176 359327226 359327105 7.340000e-11 80.5
60 TraesCS3A01G166100 chr6A 82.000 100 8 7 3342 3440 39173240 39173330 9.500000e-10 76.8
61 TraesCS3A01G166100 chr7D 90.880 625 52 2 3712 4332 627403969 627404592 0.000000e+00 833.0
62 TraesCS3A01G166100 chr7D 77.654 358 69 9 3343 3694 38223580 38223932 3.230000e-49 207.0
63 TraesCS3A01G166100 chr7D 89.691 97 8 2 2064 2159 514348282 514348187 1.200000e-23 122.0
64 TraesCS3A01G166100 chr7D 82.517 143 14 5 8505 8636 34756877 34757019 2.010000e-21 115.0
65 TraesCS3A01G166100 chr7D 90.698 86 6 2 2071 2155 70228802 70228886 7.240000e-21 113.0
66 TraesCS3A01G166100 chr7D 79.710 138 13 10 8051 8176 460561289 460561423 1.580000e-12 86.1
67 TraesCS3A01G166100 chr1A 90.297 639 56 3 3712 4344 62453363 62454001 0.000000e+00 832.0
68 TraesCS3A01G166100 chr1A 96.791 187 5 1 6966 7151 548319385 548319571 2.390000e-80 311.0
69 TraesCS3A01G166100 chr1A 95.531 179 7 1 6976 7153 508278061 508278239 1.450000e-72 285.0
70 TraesCS3A01G166100 chr1A 95.531 179 7 1 6976 7153 508305387 508305565 1.450000e-72 285.0
71 TraesCS3A01G166100 chr1A 95.531 179 7 1 6976 7153 508310271 508310449 1.450000e-72 285.0
72 TraesCS3A01G166100 chr1A 93.617 188 10 2 6968 7153 133163553 133163740 6.750000e-71 279.0
73 TraesCS3A01G166100 chr1A 80.952 336 50 11 3342 3670 495286501 495286829 4.090000e-63 254.0
74 TraesCS3A01G166100 chr1A 85.311 177 22 3 8017 8193 223999692 223999520 7.040000e-41 180.0
75 TraesCS3A01G166100 chr1A 83.916 143 11 4 8505 8635 155857848 155857706 9.300000e-25 126.0
76 TraesCS3A01G166100 chr1A 83.824 136 11 5 8500 8624 361357560 361357425 1.560000e-22 119.0
77 TraesCS3A01G166100 chr1A 78.571 126 13 8 8063 8176 312679811 312679934 4.420000e-08 71.3
78 TraesCS3A01G166100 chr1A 78.571 126 13 9 8063 8176 426682387 426682510 4.420000e-08 71.3
79 TraesCS3A01G166100 chr5D 89.724 652 59 6 3712 4357 547504249 547504898 0.000000e+00 826.0
80 TraesCS3A01G166100 chr5D 95.263 190 7 1 1 188 407077042 407077231 5.180000e-77 300.0
81 TraesCS3A01G166100 chr5D 96.067 178 7 0 6977 7154 393059879 393059702 3.120000e-74 291.0
82 TraesCS3A01G166100 chr5D 80.814 172 33 0 8024 8195 438391375 438391204 1.550000e-27 135.0
83 TraesCS3A01G166100 chr5D 85.714 98 12 2 8536 8632 164604900 164604996 1.570000e-17 102.0
84 TraesCS3A01G166100 chr5D 80.537 149 16 5 8500 8637 204323378 204323232 1.570000e-17 102.0
85 TraesCS3A01G166100 chr5D 79.200 125 13 8 8063 8176 343986147 343986025 3.420000e-09 75.0
86 TraesCS3A01G166100 chr5D 77.778 126 14 9 8063 8176 339825836 339825959 2.060000e-06 65.8
87 TraesCS3A01G166100 chr5D 100.000 28 0 0 6137 6164 550574644 550574617 1.600000e-02 52.8
88 TraesCS3A01G166100 chr4A 98.883 179 1 1 6977 7154 579437846 579437668 1.430000e-82 318.0
89 TraesCS3A01G166100 chr4A 97.191 178 5 0 6977 7154 595978659 595978482 1.440000e-77 302.0
90 TraesCS3A01G166100 chr4A 94.241 191 11 0 6969 7159 534238938 534239128 8.660000e-75 292.0
91 TraesCS3A01G166100 chr7A 98.857 175 2 0 6976 7150 671420709 671420883 6.650000e-81 313.0
92 TraesCS3A01G166100 chr7A 96.237 186 7 0 1 186 714197623 714197438 1.110000e-78 305.0
93 TraesCS3A01G166100 chr7A 97.714 175 4 0 6977 7151 103116474 103116300 1.440000e-77 302.0
94 TraesCS3A01G166100 chr7A 82.550 149 15 1 8500 8637 579808520 579808372 4.330000e-23 121.0
95 TraesCS3A01G166100 chr7A 81.752 137 14 4 8499 8624 186540765 186540629 4.360000e-18 104.0
96 TraesCS3A01G166100 chr6D 95.745 188 6 2 1 186 176070365 176070552 1.440000e-77 302.0
97 TraesCS3A01G166100 chr6D 94.819 193 8 1 1 191 212512677 212512869 5.180000e-77 300.0
98 TraesCS3A01G166100 chr6D 94.819 193 6 3 1 189 149682124 149681932 1.860000e-76 298.0
99 TraesCS3A01G166100 chr6D 93.264 193 13 0 6966 7158 75402905 75403097 1.450000e-72 285.0
100 TraesCS3A01G166100 chr6D 93.443 183 11 1 6967 7149 54493630 54493449 4.060000e-68 270.0
101 TraesCS3A01G166100 chr6D 91.753 194 14 2 6962 7154 38224740 38224548 1.460000e-67 268.0
102 TraesCS3A01G166100 chr6D 93.714 175 10 1 6975 7149 4153084 4152911 2.440000e-65 261.0
103 TraesCS3A01G166100 chr6D 91.623 191 13 3 6965 7155 468312653 468312466 2.440000e-65 261.0
104 TraesCS3A01G166100 chr6D 91.099 191 15 1 6975 7163 435980385 435980575 3.160000e-64 257.0
105 TraesCS3A01G166100 chr6D 90.099 202 15 5 6964 7163 470664454 470664652 3.160000e-64 257.0
106 TraesCS3A01G166100 chr6D 80.952 147 16 5 8505 8640 410398290 410398435 1.210000e-18 106.0
107 TraesCS3A01G166100 chr6D 83.750 80 10 2 8537 8616 445887932 445888008 1.230000e-08 73.1
108 TraesCS3A01G166100 chr6D 76.190 126 16 9 8063 8176 231515789 231515666 4.000000e-03 54.7
109 TraesCS3A01G166100 chr6D 100.000 28 0 0 8149 8176 188940259 188940232 1.600000e-02 52.8
110 TraesCS3A01G166100 chrUn 95.263 190 7 1 1 188 97199038 97198849 5.180000e-77 300.0
111 TraesCS3A01G166100 chrUn 91.620 179 15 0 6971 7149 54266733 54266911 1.900000e-61 248.0
112 TraesCS3A01G166100 chrUn 91.620 179 14 1 6977 7154 324951007 324951185 6.840000e-61 246.0
113 TraesCS3A01G166100 chrUn 91.061 179 15 1 6977 7154 369819623 369819801 3.180000e-59 241.0
114 TraesCS3A01G166100 chrUn 89.529 191 17 3 6965 7155 128602956 128602769 1.140000e-58 239.0
115 TraesCS3A01G166100 chrUn 90.857 175 16 0 6977 7151 102837101 102836927 1.480000e-57 235.0
116 TraesCS3A01G166100 chrUn 91.228 171 15 0 6977 7147 8134768 8134598 5.330000e-57 233.0
117 TraesCS3A01G166100 chrUn 89.944 179 18 0 6971 7149 336660993 336660815 1.920000e-56 231.0
118 TraesCS3A01G166100 chrUn 89.071 183 20 0 6967 7149 7876867 7877049 2.480000e-55 228.0
119 TraesCS3A01G166100 chrUn 89.444 180 17 2 6970 7149 336849439 336849616 8.910000e-55 226.0
120 TraesCS3A01G166100 chrUn 83.696 92 4 5 8500 8580 90452960 90453051 9.500000e-10 76.8
121 TraesCS3A01G166100 chrUn 78.571 126 12 10 8063 8176 102813551 102813429 1.590000e-07 69.4
122 TraesCS3A01G166100 chr2B 93.299 194 10 3 6965 7157 81756864 81756673 5.210000e-72 283.0
123 TraesCS3A01G166100 chr2B 83.453 139 23 0 8306 8444 767131381 767131243 7.190000e-26 130.0
124 TraesCS3A01G166100 chr7B 95.429 175 8 0 6977 7151 606555483 606555657 6.750000e-71 279.0
125 TraesCS3A01G166100 chr7B 79.562 137 15 8 8051 8176 470912614 470912748 1.580000e-12 86.1
126 TraesCS3A01G166100 chr1D 92.821 195 10 4 6967 7159 465527017 465526825 6.750000e-71 279.0
127 TraesCS3A01G166100 chr1D 91.837 196 14 2 6960 7154 451063657 451063463 1.130000e-68 272.0
128 TraesCS3A01G166100 chr1D 87.629 97 12 0 8536 8632 370013735 370013831 7.240000e-21 113.0
129 TraesCS3A01G166100 chr1D 87.640 89 9 2 8547 8635 341037422 341037336 1.570000e-17 102.0
130 TraesCS3A01G166100 chr1D 82.787 122 11 5 8509 8620 359723387 359723508 5.640000e-17 100.0
131 TraesCS3A01G166100 chr1D 85.106 94 10 3 8547 8637 438985749 438985657 9.430000e-15 93.5
132 TraesCS3A01G166100 chr1D 80.899 89 13 4 8549 8635 79946309 79946223 5.720000e-07 67.6
133 TraesCS3A01G166100 chr1D 88.462 52 3 3 8127 8176 241177832 241177782 9.570000e-05 60.2
134 TraesCS3A01G166100 chr1D 89.130 46 5 0 2737 2782 478928477 478928432 3.440000e-04 58.4
135 TraesCS3A01G166100 chr4B 92.268 194 13 1 6965 7158 640979290 640979481 3.140000e-69 274.0
136 TraesCS3A01G166100 chr4B 92.147 191 12 3 6965 7155 206242717 206242904 5.250000e-67 267.0
137 TraesCS3A01G166100 chr4B 92.147 191 12 3 6965 7155 300587472 300587659 5.250000e-67 267.0
138 TraesCS3A01G166100 chr4B 84.252 127 9 3 8505 8620 316295886 316296012 7.240000e-21 113.0
139 TraesCS3A01G166100 chr4B 86.420 81 5 4 8536 8616 92547273 92547347 5.680000e-12 84.2
140 TraesCS3A01G166100 chr4B 88.060 67 2 5 8113 8176 282327158 282327221 3.420000e-09 75.0
141 TraesCS3A01G166100 chr4B 77.419 124 17 6 8063 8176 446570314 446570192 7.400000e-06 63.9
142 TraesCS3A01G166100 chr4B 76.984 126 15 11 8063 8176 437575057 437575180 9.570000e-05 60.2
143 TraesCS3A01G166100 chr2A 84.173 139 22 0 8306 8444 755930165 755930027 1.550000e-27 135.0
144 TraesCS3A01G166100 chr2A 79.048 105 14 7 6085 6186 607429537 607429438 2.060000e-06 65.8
145 TraesCS3A01G166100 chr1B 89.888 89 9 0 8536 8624 390622392 390622304 2.010000e-21 115.0
146 TraesCS3A01G166100 chr5A 87.368 95 10 2 2062 2155 696989142 696989235 3.370000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G166100 chr3A 171032812 171041635 8823 False 16295.000000 16295 100.000000 1 8824 1 chr3A.!!$F1 8823
1 TraesCS3A01G166100 chr3A 507056756 507057399 643 False 839.000000 839 90.263000 3709 4350 1 chr3A.!!$F2 641
2 TraesCS3A01G166100 chr3B 228505694 228512852 7158 True 1127.833333 2106 88.877333 267 7556 6 chr3B.!!$R3 7289
3 TraesCS3A01G166100 chr3D 157343346 157353989 10643 True 731.133333 1628 90.222250 191 8818 12 chr3D.!!$R5 8627
4 TraesCS3A01G166100 chr5B 311547248 311547880 632 False 904.000000 904 92.575000 3709 4335 1 chr5B.!!$F1 626
5 TraesCS3A01G166100 chr4D 454814881 454815524 643 True 896.000000 896 91.938000 3709 4346 1 chr4D.!!$R4 637
6 TraesCS3A01G166100 chr2D 619938230 619938875 645 False 869.000000 869 91.049000 3709 4351 1 chr2D.!!$F1 642
7 TraesCS3A01G166100 chr6B 707334349 707335011 662 False 854.000000 854 90.060000 3708 4364 1 chr6B.!!$F3 656
8 TraesCS3A01G166100 chr6A 144095534 144096180 646 True 839.000000 839 90.263000 3712 4350 1 chr6A.!!$R2 638
9 TraesCS3A01G166100 chr7D 627403969 627404592 623 False 833.000000 833 90.880000 3712 4332 1 chr7D.!!$F5 620
10 TraesCS3A01G166100 chr1A 62453363 62454001 638 False 832.000000 832 90.297000 3712 4344 1 chr1A.!!$F1 632
11 TraesCS3A01G166100 chr5D 547504249 547504898 649 False 826.000000 826 89.724000 3712 4357 1 chr5D.!!$F4 645

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
187 188 0.033781 TCGGGTTGGGTCGTTACAAG 59.966 55.000 0.00 0.00 0.00 3.16 F
217 218 0.178970 TCTGGTCGGACTATAGCCCC 60.179 60.000 8.23 0.84 0.00 5.80 F
1416 1493 0.314302 CCCGTACGATAGCCCAAGAG 59.686 60.000 18.76 0.00 42.67 2.85 F
2483 2705 0.459899 TCTCATAAGCCGCATGTCGT 59.540 50.000 8.37 0.00 36.19 4.34 F
2851 5281 0.462047 CCGCTGAAGCCCTCGTTTAT 60.462 55.000 0.00 0.00 37.91 1.40 F
4264 6721 0.619255 TCCGTCCTCATGGCCCTAAA 60.619 55.000 0.00 0.00 0.00 1.85 F
5392 7914 0.452987 TTGCAATGCGAGATGAAGCC 59.547 50.000 0.00 0.00 0.00 4.35 F
5478 8000 0.471617 GCATGCTCCTCCCACACTAT 59.528 55.000 11.37 0.00 0.00 2.12 F
6549 9696 1.070758 GGTGTGGAACTCTCTGCAAGA 59.929 52.381 0.00 0.00 38.35 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1359 1436 0.172578 TACTCGCCGTTGAGACCATG 59.827 55.000 8.02 0.00 39.35 3.66 R
2042 2257 0.382515 CGTTTGGGAAGCCAAAACGA 59.617 50.000 26.57 0.00 40.66 3.85 R
3048 5480 0.741221 GCATGTCCGGACTCCTCAAC 60.741 60.000 33.39 13.24 0.00 3.18 R
4079 6528 0.668535 CATCTAGCATCGTCGGTGGA 59.331 55.000 7.76 0.00 0.00 4.02 R
4492 6950 1.154035 CGCCCATTCGTTTCAAGCC 60.154 57.895 0.00 0.00 0.00 4.35 R
5462 7984 0.904649 CACATAGTGTGGGAGGAGCA 59.095 55.000 2.22 0.00 44.27 4.26 R
7039 10187 0.036765 GCTGACGTGGGTTGTATCCA 60.037 55.000 0.00 0.00 0.00 3.41 R
7040 10188 0.036765 TGCTGACGTGGGTTGTATCC 60.037 55.000 0.00 0.00 0.00 2.59 R
8158 12114 0.188587 ATGCAGATCTCGGGTAGGGA 59.811 55.000 0.00 0.00 0.00 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.641437 TTTTTCATGAGTTGGCCTTCG 57.359 42.857 3.32 0.00 0.00 3.79
23 24 1.533625 TTTCATGAGTTGGCCTTCGG 58.466 50.000 3.32 0.00 0.00 4.30
40 41 7.581011 GCCTTCGGCCAAATTTATTATAATG 57.419 36.000 8.28 0.00 44.06 1.90
41 42 7.151976 GCCTTCGGCCAAATTTATTATAATGT 58.848 34.615 8.28 0.00 44.06 2.71
42 43 8.301002 GCCTTCGGCCAAATTTATTATAATGTA 58.699 33.333 8.28 0.00 44.06 2.29
81 82 8.964476 ATGAGAATCGTGTAATAAATTCAGGT 57.036 30.769 0.00 0.00 38.61 4.00
82 83 8.196802 TGAGAATCGTGTAATAAATTCAGGTG 57.803 34.615 0.00 0.00 38.61 4.00
83 84 7.822334 TGAGAATCGTGTAATAAATTCAGGTGT 59.178 33.333 0.00 0.00 38.61 4.16
84 85 7.974675 AGAATCGTGTAATAAATTCAGGTGTG 58.025 34.615 0.00 0.00 31.90 3.82
85 86 7.822334 AGAATCGTGTAATAAATTCAGGTGTGA 59.178 33.333 0.00 0.00 31.90 3.58
86 87 8.506168 AATCGTGTAATAAATTCAGGTGTGAT 57.494 30.769 0.00 0.00 30.85 3.06
87 88 7.915293 TCGTGTAATAAATTCAGGTGTGATT 57.085 32.000 0.00 0.00 30.85 2.57
88 89 7.747888 TCGTGTAATAAATTCAGGTGTGATTG 58.252 34.615 0.00 0.00 30.85 2.67
89 90 7.604545 TCGTGTAATAAATTCAGGTGTGATTGA 59.395 33.333 0.00 0.00 30.85 2.57
90 91 8.233868 CGTGTAATAAATTCAGGTGTGATTGAA 58.766 33.333 0.00 0.00 37.68 2.69
91 92 9.341899 GTGTAATAAATTCAGGTGTGATTGAAC 57.658 33.333 0.00 0.00 36.26 3.18
92 93 9.295825 TGTAATAAATTCAGGTGTGATTGAACT 57.704 29.630 0.00 0.00 36.26 3.01
99 100 9.696917 AATTCAGGTGTGATTGAACTTTAAATC 57.303 29.630 0.00 0.00 36.26 2.17
100 101 8.463930 TTCAGGTGTGATTGAACTTTAAATCT 57.536 30.769 1.54 0.00 34.52 2.40
101 102 8.463930 TCAGGTGTGATTGAACTTTAAATCTT 57.536 30.769 1.54 0.00 34.52 2.40
102 103 8.912988 TCAGGTGTGATTGAACTTTAAATCTTT 58.087 29.630 1.54 0.00 34.52 2.52
103 104 9.533253 CAGGTGTGATTGAACTTTAAATCTTTT 57.467 29.630 1.54 0.00 34.52 2.27
104 105 9.750125 AGGTGTGATTGAACTTTAAATCTTTTC 57.250 29.630 1.54 0.00 34.52 2.29
105 106 9.528018 GGTGTGATTGAACTTTAAATCTTTTCA 57.472 29.630 1.54 0.00 34.52 2.69
121 122 7.750229 ATCTTTTCATCAATGTACTGTGTGT 57.250 32.000 0.00 0.00 0.00 3.72
122 123 6.958255 TCTTTTCATCAATGTACTGTGTGTG 58.042 36.000 0.00 0.00 0.00 3.82
123 124 4.747540 TTCATCAATGTACTGTGTGTGC 57.252 40.909 0.00 0.00 0.00 4.57
124 125 3.073678 TCATCAATGTACTGTGTGTGCC 58.926 45.455 0.00 0.00 0.00 5.01
125 126 2.629336 TCAATGTACTGTGTGTGCCA 57.371 45.000 0.00 0.00 0.00 4.92
126 127 2.493035 TCAATGTACTGTGTGTGCCAG 58.507 47.619 0.00 0.00 36.01 4.85
127 128 1.069022 CAATGTACTGTGTGTGCCAGC 60.069 52.381 0.00 0.00 33.09 4.85
128 129 0.108396 ATGTACTGTGTGTGCCAGCA 59.892 50.000 0.00 0.00 33.09 4.41
129 130 0.108396 TGTACTGTGTGTGCCAGCAT 59.892 50.000 0.00 0.00 33.09 3.79
130 131 1.238439 GTACTGTGTGTGCCAGCATT 58.762 50.000 0.00 0.00 33.09 3.56
131 132 1.197721 GTACTGTGTGTGCCAGCATTC 59.802 52.381 0.00 0.00 33.09 2.67
132 133 0.179009 ACTGTGTGTGCCAGCATTCT 60.179 50.000 0.00 0.00 33.09 2.40
133 134 0.956633 CTGTGTGTGCCAGCATTCTT 59.043 50.000 0.00 0.00 0.00 2.52
134 135 0.669619 TGTGTGTGCCAGCATTCTTG 59.330 50.000 0.00 0.00 0.00 3.02
135 136 0.038892 GTGTGTGCCAGCATTCTTGG 60.039 55.000 0.00 0.00 0.00 3.61
136 137 1.180456 TGTGTGCCAGCATTCTTGGG 61.180 55.000 0.00 0.00 0.00 4.12
137 138 0.895100 GTGTGCCAGCATTCTTGGGA 60.895 55.000 0.00 0.00 0.00 4.37
138 139 0.040058 TGTGCCAGCATTCTTGGGAT 59.960 50.000 0.00 0.00 0.00 3.85
139 140 0.458669 GTGCCAGCATTCTTGGGATG 59.541 55.000 0.00 0.00 0.00 3.51
140 141 0.332293 TGCCAGCATTCTTGGGATGA 59.668 50.000 0.00 0.00 0.00 2.92
141 142 1.063492 TGCCAGCATTCTTGGGATGAT 60.063 47.619 0.00 0.00 0.00 2.45
142 143 2.175284 TGCCAGCATTCTTGGGATGATA 59.825 45.455 0.00 0.00 0.00 2.15
143 144 2.555757 GCCAGCATTCTTGGGATGATAC 59.444 50.000 0.00 0.00 0.00 2.24
144 145 3.824133 CCAGCATTCTTGGGATGATACA 58.176 45.455 0.00 0.00 0.00 2.29
145 146 3.819337 CCAGCATTCTTGGGATGATACAG 59.181 47.826 0.00 0.00 0.00 2.74
146 147 3.252701 CAGCATTCTTGGGATGATACAGC 59.747 47.826 0.00 0.00 0.00 4.40
147 148 3.137913 AGCATTCTTGGGATGATACAGCT 59.862 43.478 0.00 0.00 0.00 4.24
148 149 4.349048 AGCATTCTTGGGATGATACAGCTA 59.651 41.667 0.00 0.00 0.00 3.32
149 150 4.453819 GCATTCTTGGGATGATACAGCTAC 59.546 45.833 0.00 0.00 0.00 3.58
150 151 5.614308 CATTCTTGGGATGATACAGCTACA 58.386 41.667 0.00 0.00 0.00 2.74
151 152 4.672587 TCTTGGGATGATACAGCTACAC 57.327 45.455 0.00 0.00 0.00 2.90
152 153 4.030216 TCTTGGGATGATACAGCTACACA 58.970 43.478 0.00 0.00 0.00 3.72
153 154 4.100035 TCTTGGGATGATACAGCTACACAG 59.900 45.833 0.00 0.00 0.00 3.66
154 155 3.642141 TGGGATGATACAGCTACACAGA 58.358 45.455 0.00 0.00 0.00 3.41
155 156 3.638627 TGGGATGATACAGCTACACAGAG 59.361 47.826 0.00 0.00 0.00 3.35
156 157 3.891977 GGGATGATACAGCTACACAGAGA 59.108 47.826 0.00 0.00 0.00 3.10
157 158 4.261825 GGGATGATACAGCTACACAGAGAC 60.262 50.000 0.00 0.00 0.00 3.36
158 159 4.582656 GGATGATACAGCTACACAGAGACT 59.417 45.833 0.00 0.00 0.00 3.24
159 160 5.068460 GGATGATACAGCTACACAGAGACTT 59.932 44.000 0.00 0.00 0.00 3.01
160 161 5.316327 TGATACAGCTACACAGAGACTTG 57.684 43.478 0.00 0.00 0.00 3.16
161 162 5.010282 TGATACAGCTACACAGAGACTTGA 58.990 41.667 0.00 0.00 0.00 3.02
162 163 3.651803 ACAGCTACACAGAGACTTGAC 57.348 47.619 0.00 0.00 0.00 3.18
163 164 2.297597 ACAGCTACACAGAGACTTGACC 59.702 50.000 0.00 0.00 0.00 4.02
164 165 1.542030 AGCTACACAGAGACTTGACCG 59.458 52.381 0.00 0.00 0.00 4.79
165 166 1.540267 GCTACACAGAGACTTGACCGA 59.460 52.381 0.00 0.00 0.00 4.69
166 167 2.164624 GCTACACAGAGACTTGACCGAT 59.835 50.000 0.00 0.00 0.00 4.18
167 168 3.367498 GCTACACAGAGACTTGACCGATT 60.367 47.826 0.00 0.00 0.00 3.34
168 169 3.753294 ACACAGAGACTTGACCGATTT 57.247 42.857 0.00 0.00 0.00 2.17
169 170 3.654414 ACACAGAGACTTGACCGATTTC 58.346 45.455 0.00 0.00 0.00 2.17
170 171 2.663602 CACAGAGACTTGACCGATTTCG 59.336 50.000 0.00 0.00 39.44 3.46
180 181 3.481661 CGATTTCGGGTTGGGTCG 58.518 61.111 0.00 0.00 35.37 4.79
181 182 1.375013 CGATTTCGGGTTGGGTCGT 60.375 57.895 0.00 0.00 35.37 4.34
182 183 0.952010 CGATTTCGGGTTGGGTCGTT 60.952 55.000 0.00 0.00 35.37 3.85
183 184 1.672441 CGATTTCGGGTTGGGTCGTTA 60.672 52.381 0.00 0.00 35.37 3.18
184 185 1.733912 GATTTCGGGTTGGGTCGTTAC 59.266 52.381 0.00 0.00 0.00 2.50
185 186 0.467384 TTTCGGGTTGGGTCGTTACA 59.533 50.000 0.00 0.00 0.00 2.41
186 187 0.467384 TTCGGGTTGGGTCGTTACAA 59.533 50.000 0.00 0.00 0.00 2.41
187 188 0.033781 TCGGGTTGGGTCGTTACAAG 59.966 55.000 0.00 0.00 0.00 3.16
188 189 0.952010 CGGGTTGGGTCGTTACAAGG 60.952 60.000 0.00 0.00 0.00 3.61
189 190 1.239296 GGGTTGGGTCGTTACAAGGC 61.239 60.000 0.00 0.00 0.00 4.35
217 218 0.178970 TCTGGTCGGACTATAGCCCC 60.179 60.000 8.23 0.84 0.00 5.80
280 284 5.870706 TGGTTCCTTCTTTTTGTTTGGTTT 58.129 33.333 0.00 0.00 0.00 3.27
294 298 9.468532 TTTTGTTTGGTTTGATTTTCCTTTTTG 57.531 25.926 0.00 0.00 0.00 2.44
297 301 6.434018 TTGGTTTGATTTTCCTTTTTGCTG 57.566 33.333 0.00 0.00 0.00 4.41
403 408 9.492973 AATTTCATTAGAAAACACCAATTCTGG 57.507 29.630 0.00 0.00 46.06 3.86
417 422 8.469200 ACACCAATTCTGGAATATACAAACATG 58.531 33.333 0.00 0.00 46.92 3.21
511 518 8.554835 TTAGTGATCAATTTTGGAATACACGA 57.445 30.769 0.00 0.00 0.00 4.35
512 519 7.447374 AGTGATCAATTTTGGAATACACGAA 57.553 32.000 0.00 0.00 0.00 3.85
513 520 8.055279 AGTGATCAATTTTGGAATACACGAAT 57.945 30.769 0.00 0.00 0.00 3.34
514 521 9.173021 AGTGATCAATTTTGGAATACACGAATA 57.827 29.630 0.00 0.00 0.00 1.75
515 522 9.950680 GTGATCAATTTTGGAATACACGAATAT 57.049 29.630 0.00 0.00 0.00 1.28
1004 1071 1.745115 GCGGCCAGTGAGCACATTA 60.745 57.895 2.24 0.00 0.00 1.90
1079 1150 2.152016 GTTTACCTGTCAGGGTCTTGC 58.848 52.381 23.06 4.51 40.58 4.01
1092 1163 2.747855 CTTGCCCGCCAAGTCCTC 60.748 66.667 6.04 0.00 44.74 3.71
1124 1195 1.490693 CCTGGATCGAAATGGCGTCG 61.491 60.000 0.00 0.00 39.88 5.12
1202 1273 2.181205 GAGCACGACGAAGAAGATGAG 58.819 52.381 0.00 0.00 0.00 2.90
1206 1277 2.917971 CACGACGAAGAAGATGAGTTCC 59.082 50.000 0.00 0.00 0.00 3.62
1416 1493 0.314302 CCCGTACGATAGCCCAAGAG 59.686 60.000 18.76 0.00 42.67 2.85
1733 1810 2.512515 GACATGGAGGAGGTGCGC 60.513 66.667 0.00 0.00 0.00 6.09
1908 1985 5.233957 TCATCGCAAATCATTAACCACAG 57.766 39.130 0.00 0.00 0.00 3.66
1925 2002 0.674895 CAGCCACTACCACCAGCTTC 60.675 60.000 0.00 0.00 0.00 3.86
1944 2021 8.084684 CCAGCTTCCTAATTAATTTTCCATAGC 58.915 37.037 5.91 8.38 0.00 2.97
1945 2022 7.805071 CAGCTTCCTAATTAATTTTCCATAGCG 59.195 37.037 5.91 2.95 0.00 4.26
1954 2031 9.783256 AATTAATTTTCCATAGCGTTGTTACTC 57.217 29.630 0.00 0.00 0.00 2.59
1955 2032 5.813080 ATTTTCCATAGCGTTGTTACTCC 57.187 39.130 0.00 0.00 0.00 3.85
1957 2034 4.546829 TTCCATAGCGTTGTTACTCCTT 57.453 40.909 0.00 0.00 0.00 3.36
1958 2035 3.857052 TCCATAGCGTTGTTACTCCTTG 58.143 45.455 0.00 0.00 0.00 3.61
1960 2037 3.617263 CCATAGCGTTGTTACTCCTTGAC 59.383 47.826 0.00 0.00 0.00 3.18
1972 2161 1.273606 CTCCTTGACACATCCGTCTGT 59.726 52.381 0.00 0.00 36.82 3.41
2008 2223 1.779569 AGTTCGTCACACGTCCATTC 58.220 50.000 0.00 0.00 43.14 2.67
2011 2226 0.606096 TCGTCACACGTCCATTCCAT 59.394 50.000 0.00 0.00 43.14 3.41
2070 2285 4.020543 TGGCTTCCCAAACGCTAAATTAT 58.979 39.130 0.00 0.00 38.46 1.28
2071 2286 5.194432 TGGCTTCCCAAACGCTAAATTATA 58.806 37.500 0.00 0.00 38.46 0.98
2072 2287 5.066764 TGGCTTCCCAAACGCTAAATTATAC 59.933 40.000 0.00 0.00 38.46 1.47
2073 2288 5.506815 GGCTTCCCAAACGCTAAATTATACC 60.507 44.000 0.00 0.00 0.00 2.73
2074 2289 5.506815 GCTTCCCAAACGCTAAATTATACCC 60.507 44.000 0.00 0.00 0.00 3.69
2075 2290 4.463070 TCCCAAACGCTAAATTATACCCC 58.537 43.478 0.00 0.00 0.00 4.95
2076 2291 3.570975 CCCAAACGCTAAATTATACCCCC 59.429 47.826 0.00 0.00 0.00 5.40
2077 2292 4.466827 CCAAACGCTAAATTATACCCCCT 58.533 43.478 0.00 0.00 0.00 4.79
2078 2293 4.517832 CCAAACGCTAAATTATACCCCCTC 59.482 45.833 0.00 0.00 0.00 4.30
2079 2294 5.374071 CAAACGCTAAATTATACCCCCTCT 58.626 41.667 0.00 0.00 0.00 3.69
2080 2295 4.618920 ACGCTAAATTATACCCCCTCTG 57.381 45.455 0.00 0.00 0.00 3.35
2081 2296 3.971971 ACGCTAAATTATACCCCCTCTGT 59.028 43.478 0.00 0.00 0.00 3.41
2082 2297 5.149976 ACGCTAAATTATACCCCCTCTGTA 58.850 41.667 0.00 0.00 0.00 2.74
2083 2298 5.603813 ACGCTAAATTATACCCCCTCTGTAA 59.396 40.000 0.00 0.00 0.00 2.41
2084 2299 6.100134 ACGCTAAATTATACCCCCTCTGTAAA 59.900 38.462 0.00 0.00 0.00 2.01
2085 2300 7.166167 CGCTAAATTATACCCCCTCTGTAAAT 58.834 38.462 0.00 0.00 0.00 1.40
2086 2301 7.664318 CGCTAAATTATACCCCCTCTGTAAATT 59.336 37.037 0.00 0.00 0.00 1.82
2097 2312 8.383947 ACCCCCTCTGTAAATTAATATAAGAGC 58.616 37.037 9.98 0.00 0.00 4.09
2098 2313 7.549488 CCCCCTCTGTAAATTAATATAAGAGCG 59.451 40.741 9.98 4.57 0.00 5.03
2099 2314 8.095169 CCCCTCTGTAAATTAATATAAGAGCGT 58.905 37.037 9.98 0.00 0.00 5.07
2100 2315 9.490379 CCCTCTGTAAATTAATATAAGAGCGTT 57.510 33.333 9.98 0.00 0.00 4.84
2119 2334 9.733219 AGAGCGTTTAGATCATTACTTTAGTAC 57.267 33.333 0.00 0.00 37.82 2.73
2120 2335 9.733219 GAGCGTTTAGATCATTACTTTAGTACT 57.267 33.333 0.00 0.00 34.89 2.73
2240 2458 2.230660 CCCCAAACAGAACAGTCCTTC 58.769 52.381 0.00 0.00 0.00 3.46
2241 2459 2.158608 CCCCAAACAGAACAGTCCTTCT 60.159 50.000 0.00 0.00 0.00 2.85
2242 2460 3.555966 CCCAAACAGAACAGTCCTTCTT 58.444 45.455 0.00 0.00 0.00 2.52
2248 2469 1.202940 AGAACAGTCCTTCTTTGCCCC 60.203 52.381 0.00 0.00 0.00 5.80
2279 2500 8.189119 AGTTCAGTGATATAAAAAGGCCAAAA 57.811 30.769 5.01 0.00 0.00 2.44
2283 2504 9.651913 TCAGTGATATAAAAAGGCCAAAAATTC 57.348 29.630 5.01 0.00 0.00 2.17
2286 2507 9.313118 GTGATATAAAAAGGCCAAAAATTCGAT 57.687 29.630 5.01 0.00 0.00 3.59
2430 2652 4.341806 TGACAAACATGAACAAATGCTCCT 59.658 37.500 0.00 0.00 0.00 3.69
2449 2671 1.808945 CTGTGGAGCTGAATTGGACAC 59.191 52.381 0.00 0.00 0.00 3.67
2472 2694 2.743183 CGGGGCTTTCACCTCTCATAAG 60.743 54.545 0.00 0.00 0.00 1.73
2483 2705 0.459899 TCTCATAAGCCGCATGTCGT 59.540 50.000 8.37 0.00 36.19 4.34
2511 2733 9.516314 TCTCATATACATAACATATAAGTGCGC 57.484 33.333 0.00 0.00 0.00 6.09
2514 4848 2.478894 ACATAACATATAAGTGCGCGGC 59.521 45.455 8.83 0.00 0.00 6.53
2540 4874 7.837202 TTGAATAGAAACCGATTATTGTCGT 57.163 32.000 0.00 0.00 39.89 4.34
2581 4922 1.969589 CCGCCGGTTTGCCTACTTT 60.970 57.895 1.90 0.00 0.00 2.66
2734 5156 7.285566 ACCAATGCAAACAGATATGTCTATCT 58.714 34.615 0.00 0.00 44.00 1.98
2787 5209 6.500336 AGTATAGGACAGAGGGAGTGTAAAA 58.500 40.000 0.00 0.00 0.00 1.52
2849 5279 2.358737 CCGCTGAAGCCCTCGTTT 60.359 61.111 0.00 0.00 37.91 3.60
2851 5281 0.462047 CCGCTGAAGCCCTCGTTTAT 60.462 55.000 0.00 0.00 37.91 1.40
2936 5366 1.885887 CCCTCAAATGTCTTTTCCGCA 59.114 47.619 0.00 0.00 0.00 5.69
2963 5394 5.009631 TCCGGACACTTTTGATCATTCAAT 58.990 37.500 0.00 0.00 41.38 2.57
2969 5400 3.198417 ACTTTTGATCATTCAATGCCCCC 59.802 43.478 0.00 0.00 41.38 5.40
2990 5422 7.340999 GCCCCCTTTAAAGTATTTTCTACATCA 59.659 37.037 14.03 0.00 40.09 3.07
3048 5480 4.583073 ACTGCCTTTAAACTTGTGTAAGGG 59.417 41.667 7.30 7.30 38.26 3.95
3091 5523 3.476552 CAGACAAGCCAACTCAACCTTA 58.523 45.455 0.00 0.00 0.00 2.69
3111 5543 2.414250 AACCCCATCACAAACCCATT 57.586 45.000 0.00 0.00 0.00 3.16
3203 5635 4.202535 TGGATATCCGCCTCTCTTACTGTA 60.203 45.833 17.04 0.00 39.43 2.74
3204 5636 4.156373 GGATATCCGCCTCTCTTACTGTAC 59.844 50.000 5.86 0.00 0.00 2.90
3205 5637 2.502142 TCCGCCTCTCTTACTGTACA 57.498 50.000 0.00 0.00 0.00 2.90
3207 5639 2.688446 TCCGCCTCTCTTACTGTACATG 59.312 50.000 0.00 0.00 0.00 3.21
3209 5641 3.130516 CCGCCTCTCTTACTGTACATGAA 59.869 47.826 0.00 0.00 0.00 2.57
3210 5642 4.106197 CGCCTCTCTTACTGTACATGAAC 58.894 47.826 0.00 0.00 0.00 3.18
3212 5644 5.665459 GCCTCTCTTACTGTACATGAACAT 58.335 41.667 0.00 0.00 0.00 2.71
3213 5645 6.459710 CGCCTCTCTTACTGTACATGAACATA 60.460 42.308 0.00 0.00 0.00 2.29
3214 5646 7.437748 GCCTCTCTTACTGTACATGAACATAT 58.562 38.462 0.00 0.00 0.00 1.78
3216 5648 9.469807 CCTCTCTTACTGTACATGAACATATTC 57.530 37.037 0.00 0.00 35.18 1.75
3217 5649 9.175060 CTCTCTTACTGTACATGAACATATTCG 57.825 37.037 0.00 0.00 37.69 3.34
3225 5660 8.766000 TGTACATGAACATATTCGTACTTGTT 57.234 30.769 0.00 0.00 37.69 2.83
3360 5796 0.734889 GGATGAGGATTTGTGGCACG 59.265 55.000 13.77 0.00 0.00 5.34
3407 5843 1.731709 GCTGCCCGCTTTTTATTTTGG 59.268 47.619 0.00 0.00 35.14 3.28
3658 6103 9.739276 ATATATCAGAAACTGGTTGAAACTTGA 57.261 29.630 0.00 0.00 31.51 3.02
3661 6106 5.710099 TCAGAAACTGGTTGAAACTTGACTT 59.290 36.000 0.00 0.00 31.51 3.01
3702 6148 7.529880 CGTAGGTATCACCGTTATTTTTCTT 57.470 36.000 0.00 0.00 44.90 2.52
3703 6149 7.967178 CGTAGGTATCACCGTTATTTTTCTTT 58.033 34.615 0.00 0.00 44.90 2.52
3704 6150 7.901377 CGTAGGTATCACCGTTATTTTTCTTTG 59.099 37.037 0.00 0.00 44.90 2.77
3705 6151 7.989416 AGGTATCACCGTTATTTTTCTTTGA 57.011 32.000 0.00 0.00 44.90 2.69
3706 6152 8.398878 AGGTATCACCGTTATTTTTCTTTGAA 57.601 30.769 0.00 0.00 44.90 2.69
3707 6153 8.512138 AGGTATCACCGTTATTTTTCTTTGAAG 58.488 33.333 0.00 0.00 44.90 3.02
3731 6177 5.776173 TCTTTTTGCGGGATAAACTTTCA 57.224 34.783 0.00 0.00 0.00 2.69
3805 6253 1.319541 ACATCCAGATCCGTAGACCG 58.680 55.000 0.00 0.00 0.00 4.79
3865 6313 4.147449 CGCTGTCATCGCCCCTCA 62.147 66.667 0.00 0.00 0.00 3.86
3892 6340 0.955905 GAGCCGGGCAAACTTTGTTA 59.044 50.000 23.09 0.00 0.00 2.41
4004 6453 2.711009 AGGATCCAACCTGAAGACACAA 59.289 45.455 15.82 0.00 39.01 3.33
4027 6476 2.261345 ACAAAGACGAACGACGAACAA 58.739 42.857 0.00 0.00 45.77 2.83
4061 6510 2.644676 CACTAGAGACAGATCCACCGA 58.355 52.381 0.00 0.00 0.00 4.69
4067 6516 2.428890 GAGACAGATCCACCGAAGACAT 59.571 50.000 0.00 0.00 0.00 3.06
4079 6528 1.201647 CGAAGACATACCTCCACACGT 59.798 52.381 0.00 0.00 0.00 4.49
4097 6546 0.669077 GTCCACCGACGATGCTAGAT 59.331 55.000 0.00 0.00 0.00 1.98
4110 6559 2.175878 GCTAGATGCATCACCGGAAT 57.824 50.000 27.81 8.45 42.31 3.01
4200 6650 4.825085 GGACACAAACCCTAACAAATCTCA 59.175 41.667 0.00 0.00 0.00 3.27
4264 6721 0.619255 TCCGTCCTCATGGCCCTAAA 60.619 55.000 0.00 0.00 0.00 1.85
4321 6778 1.286248 GGGAGGCAGAGAAACCCTAA 58.714 55.000 0.00 0.00 37.75 2.69
4327 6784 5.105716 GGAGGCAGAGAAACCCTAATTTTTC 60.106 44.000 0.00 0.00 32.76 2.29
4368 6826 3.315796 CGTCTCGCACGTGGTTTT 58.684 55.556 18.88 0.00 44.07 2.43
4369 6827 2.508743 CGTCTCGCACGTGGTTTTA 58.491 52.632 18.88 0.00 44.07 1.52
4370 6828 1.065358 CGTCTCGCACGTGGTTTTAT 58.935 50.000 18.88 0.00 44.07 1.40
4371 6829 1.458064 CGTCTCGCACGTGGTTTTATT 59.542 47.619 18.88 0.00 44.07 1.40
4372 6830 2.662637 CGTCTCGCACGTGGTTTTATTA 59.337 45.455 18.88 0.00 44.07 0.98
4373 6831 3.305094 CGTCTCGCACGTGGTTTTATTAT 59.695 43.478 18.88 0.00 44.07 1.28
4374 6832 4.201647 CGTCTCGCACGTGGTTTTATTATT 60.202 41.667 18.88 0.00 44.07 1.40
4375 6833 5.624292 GTCTCGCACGTGGTTTTATTATTT 58.376 37.500 18.88 0.00 0.00 1.40
4376 6834 6.081693 GTCTCGCACGTGGTTTTATTATTTT 58.918 36.000 18.88 0.00 0.00 1.82
4377 6835 6.579666 GTCTCGCACGTGGTTTTATTATTTTT 59.420 34.615 18.88 0.00 0.00 1.94
4399 6857 5.975693 TTTTGTAGGCTCAAGGGTATTTG 57.024 39.130 0.00 0.00 0.00 2.32
4400 6858 4.650972 TTGTAGGCTCAAGGGTATTTGT 57.349 40.909 0.00 0.00 0.00 2.83
4401 6859 5.765576 TTGTAGGCTCAAGGGTATTTGTA 57.234 39.130 0.00 0.00 0.00 2.41
4402 6860 5.093849 TGTAGGCTCAAGGGTATTTGTAC 57.906 43.478 0.00 0.00 0.00 2.90
4403 6861 3.261981 AGGCTCAAGGGTATTTGTACG 57.738 47.619 0.00 0.00 0.00 3.67
4404 6862 2.570302 AGGCTCAAGGGTATTTGTACGT 59.430 45.455 0.00 0.00 0.00 3.57
4405 6863 3.770933 AGGCTCAAGGGTATTTGTACGTA 59.229 43.478 0.00 0.00 0.00 3.57
4406 6864 4.407945 AGGCTCAAGGGTATTTGTACGTAT 59.592 41.667 0.00 0.00 0.00 3.06
4407 6865 5.599656 AGGCTCAAGGGTATTTGTACGTATA 59.400 40.000 0.00 0.00 0.00 1.47
4408 6866 5.693555 GGCTCAAGGGTATTTGTACGTATAC 59.306 44.000 0.00 0.00 0.00 1.47
4409 6867 6.462067 GGCTCAAGGGTATTTGTACGTATACT 60.462 42.308 0.00 0.00 32.00 2.12
4410 6868 6.982724 GCTCAAGGGTATTTGTACGTATACTT 59.017 38.462 0.00 0.00 32.00 2.24
4411 6869 8.137437 GCTCAAGGGTATTTGTACGTATACTTA 58.863 37.037 0.00 0.00 32.00 2.24
4412 6870 9.674824 CTCAAGGGTATTTGTACGTATACTTAG 57.325 37.037 0.00 0.00 32.00 2.18
4413 6871 9.407380 TCAAGGGTATTTGTACGTATACTTAGA 57.593 33.333 0.00 0.00 32.00 2.10
4416 6874 9.413734 AGGGTATTTGTACGTATACTTAGAACT 57.586 33.333 0.00 0.00 32.00 3.01
4421 6879 8.970691 TTTGTACGTATACTTAGAACTTGGAC 57.029 34.615 0.00 0.00 32.00 4.02
4422 6880 7.928307 TGTACGTATACTTAGAACTTGGACT 57.072 36.000 0.00 0.00 32.00 3.85
4423 6881 9.448438 TTGTACGTATACTTAGAACTTGGACTA 57.552 33.333 0.00 0.00 32.00 2.59
4424 6882 8.883731 TGTACGTATACTTAGAACTTGGACTAC 58.116 37.037 0.00 0.00 32.00 2.73
4425 6883 9.103861 GTACGTATACTTAGAACTTGGACTACT 57.896 37.037 0.00 0.00 0.00 2.57
4427 6885 9.844257 ACGTATACTTAGAACTTGGACTACTAT 57.156 33.333 0.56 0.00 0.00 2.12
4457 6915 9.849166 ATTTAGTTGAAGTTTTCTTTTTGACGA 57.151 25.926 0.00 0.00 40.61 4.20
4485 6943 2.778299 GTGTGGGATTGAACTACTGCA 58.222 47.619 0.00 0.00 0.00 4.41
4492 6950 3.000322 GGATTGAACTACTGCACGAATCG 60.000 47.826 0.00 0.00 0.00 3.34
4522 6982 2.215451 AATGGGCGGCAGGACTTGAT 62.215 55.000 12.47 0.00 0.00 2.57
4665 7136 1.079405 ATTCGTGGCGATGAACGGT 60.079 52.632 5.43 0.00 42.83 4.83
4699 7170 1.332904 CGTTTGCACTGAGTTTCCGAC 60.333 52.381 0.00 0.00 0.00 4.79
4753 7224 4.007644 TCGTGCACTGCCCTGGAG 62.008 66.667 16.19 0.00 0.00 3.86
4784 7255 1.282248 TTGTGCTCGCTAGTGTTCGC 61.282 55.000 2.66 5.72 0.00 4.70
4862 7375 0.654160 TAGGACGACACGACGCTATG 59.346 55.000 0.00 0.00 36.70 2.23
4947 7460 6.683974 AGCTAATGGTTTGACACATACATC 57.316 37.500 0.00 0.00 0.00 3.06
4948 7461 6.179756 AGCTAATGGTTTGACACATACATCA 58.820 36.000 0.00 0.00 0.00 3.07
4989 7502 9.953697 GATAGAGTGACTTCGTTTAGAATATGT 57.046 33.333 0.00 0.00 38.34 2.29
5092 7605 6.531503 TTCATAATTTTACAATCCGGGCAA 57.468 33.333 0.00 0.00 0.00 4.52
5112 7625 2.496899 AGGCCCAACACATCAACTAG 57.503 50.000 0.00 0.00 0.00 2.57
5124 7637 3.699538 ACATCAACTAGTCGCTACATCCA 59.300 43.478 0.00 0.00 0.00 3.41
5200 7718 3.596214 CAACAAGGCTATGACTTACCGT 58.404 45.455 0.00 0.00 0.00 4.83
5219 7737 4.628333 ACCGTCTTACCGTATTTTGTGATG 59.372 41.667 0.00 0.00 0.00 3.07
5263 7784 4.288105 AGTTCCTTTCCTCACTCATCACAT 59.712 41.667 0.00 0.00 0.00 3.21
5298 7819 2.945008 CACCAGTGCCATATGTTCGATT 59.055 45.455 1.24 0.00 0.00 3.34
5334 7855 2.874701 CCTTGATCATAGAAACCGCCTG 59.125 50.000 0.00 0.00 0.00 4.85
5339 7860 2.735151 TCATAGAAACCGCCTGAGAGA 58.265 47.619 0.00 0.00 0.00 3.10
5341 7862 3.131223 TCATAGAAACCGCCTGAGAGAAG 59.869 47.826 0.00 0.00 0.00 2.85
5343 7864 1.694696 AGAAACCGCCTGAGAGAAGTT 59.305 47.619 0.00 0.00 0.00 2.66
5378 7900 0.891904 GGGTAGCGGGTTCTTTGCAA 60.892 55.000 0.00 0.00 0.00 4.08
5392 7914 0.452987 TTGCAATGCGAGATGAAGCC 59.547 50.000 0.00 0.00 0.00 4.35
5418 7940 6.315714 CCTCTCTACACCCAGATCCTATTTA 58.684 44.000 0.00 0.00 0.00 1.40
5462 7984 3.447229 GGCAATTTTACTACCTGGTGCAT 59.553 43.478 10.23 0.00 32.41 3.96
5463 7985 4.423732 GCAATTTTACTACCTGGTGCATG 58.576 43.478 10.23 0.00 0.00 4.06
5465 7987 3.433306 TTTTACTACCTGGTGCATGCT 57.567 42.857 20.33 0.00 0.00 3.79
5478 8000 0.471617 GCATGCTCCTCCCACACTAT 59.528 55.000 11.37 0.00 0.00 2.12
5491 8013 3.988379 CACACTATGTGGCAAACAAGT 57.012 42.857 0.82 0.00 44.27 3.16
5518 8040 3.499563 CCATGTAGGGTGTTTTTCCAGGA 60.500 47.826 0.00 0.00 0.00 3.86
5571 8093 7.532682 TTGGCATTGTTTTTACTCAGTTTTC 57.467 32.000 0.00 0.00 0.00 2.29
5712 8234 7.345422 TGAACCTTTTCAAACATTCATGAGA 57.655 32.000 0.00 0.00 38.87 3.27
5964 8527 7.352079 AGAGTTGTTTTCCATTTTCATGACT 57.648 32.000 0.00 0.00 31.07 3.41
5966 8529 8.571336 AGAGTTGTTTTCCATTTTCATGACTAG 58.429 33.333 0.00 0.00 31.07 2.57
5985 8548 6.208599 TGACTAGTTTTCAAATCCATGAACCC 59.791 38.462 0.00 0.00 38.95 4.11
5990 8553 6.992123 AGTTTTCAAATCCATGAACCCTTTTC 59.008 34.615 0.00 0.00 38.95 2.29
6000 8563 5.336372 CCATGAACCCTTTTCTAAATTCGCA 60.336 40.000 0.00 0.00 0.00 5.10
6081 8646 7.771826 TGAATGCTCTTCTCATATTCATGAACA 59.228 33.333 11.07 0.00 40.66 3.18
6146 8712 5.982890 TTCCAAATCCATGAACTTTCCTC 57.017 39.130 0.00 0.00 0.00 3.71
6161 8727 8.423349 TGAACTTTCCTCAAATTCATGAACATT 58.577 29.630 11.07 6.39 0.00 2.71
6303 8885 3.756933 TTTTGAACCGCTACAGTACCT 57.243 42.857 0.00 0.00 0.00 3.08
6304 8886 3.308438 TTTGAACCGCTACAGTACCTC 57.692 47.619 0.00 0.00 0.00 3.85
6305 8887 1.913778 TGAACCGCTACAGTACCTCA 58.086 50.000 0.00 0.00 0.00 3.86
6306 8888 2.453521 TGAACCGCTACAGTACCTCAT 58.546 47.619 0.00 0.00 0.00 2.90
6307 8889 2.829720 TGAACCGCTACAGTACCTCATT 59.170 45.455 0.00 0.00 0.00 2.57
6312 8894 3.318017 CGCTACAGTACCTCATTATGGC 58.682 50.000 0.00 0.00 0.00 4.40
6334 8916 4.151689 GCACAGTGACTAAAATCGCTACAA 59.848 41.667 4.15 0.00 37.34 2.41
6365 8947 2.741092 GACACAGTCCCTCGCCAA 59.259 61.111 0.00 0.00 0.00 4.52
6371 8953 2.058595 AGTCCCTCGCCAACGCTAT 61.059 57.895 0.00 0.00 39.84 2.97
6482 9629 4.847444 GCCTCCAGCTCCGCTTCC 62.847 72.222 0.00 0.00 36.40 3.46
6547 9694 1.131638 AGGTGTGGAACTCTCTGCAA 58.868 50.000 0.00 0.00 38.04 4.08
6549 9696 1.070758 GGTGTGGAACTCTCTGCAAGA 59.929 52.381 0.00 0.00 38.35 3.02
6590 9737 1.860676 TTAATCGCGTAGGACCATGC 58.139 50.000 5.77 0.00 0.00 4.06
6619 9766 2.683867 CGCTTGGCTAGTCTACACTACT 59.316 50.000 0.00 0.00 33.62 2.57
6622 9769 5.163683 CGCTTGGCTAGTCTACACTACTTAA 60.164 44.000 0.00 0.00 33.62 1.85
6652 9799 3.380004 CACACTTAAGTTTCAGCCAACCA 59.620 43.478 5.07 0.00 0.00 3.67
6678 9825 1.376609 GATGGTGCAACATCCGGTCC 61.377 60.000 30.75 8.27 41.03 4.46
6700 9848 3.547613 CGGACGTCCTAGCATTAGTGTAC 60.548 52.174 30.92 0.16 0.00 2.90
6741 9889 1.651737 TTCTCCGGATTCCCTTGACA 58.348 50.000 3.57 0.00 0.00 3.58
6743 9891 2.196595 TCTCCGGATTCCCTTGACAAT 58.803 47.619 3.57 0.00 0.00 2.71
6744 9892 2.576191 TCTCCGGATTCCCTTGACAATT 59.424 45.455 3.57 0.00 0.00 2.32
6745 9893 3.010138 TCTCCGGATTCCCTTGACAATTT 59.990 43.478 3.57 0.00 0.00 1.82
6747 9895 4.156477 TCCGGATTCCCTTGACAATTTTT 58.844 39.130 0.00 0.00 0.00 1.94
6837 9985 7.568349 TCAGCTGAACCATACATATCTTTTCT 58.432 34.615 15.67 0.00 0.00 2.52
6928 10076 5.480642 TGATAATTGTTGGTGCCAAACAT 57.519 34.783 5.09 0.00 37.70 2.71
6929 10077 5.236282 TGATAATTGTTGGTGCCAAACATG 58.764 37.500 5.09 0.00 37.70 3.21
6939 10087 3.366374 GGTGCCAAACATGAGCTAGTTTC 60.366 47.826 0.00 1.37 35.90 2.78
6985 10133 8.990693 AACCATATTATTAGATGGGAGTACCT 57.009 34.615 9.96 0.00 45.54 3.08
6987 10135 9.716556 ACCATATTATTAGATGGGAGTACCTAG 57.283 37.037 9.96 0.00 45.54 3.02
6988 10136 9.937876 CCATATTATTAGATGGGAGTACCTAGA 57.062 37.037 0.00 0.00 39.09 2.43
6992 10140 8.937207 TTATTAGATGGGAGTACCTAGAACTC 57.063 38.462 13.84 13.84 42.19 3.01
6993 10141 4.883021 AGATGGGAGTACCTAGAACTCA 57.117 45.455 20.28 7.79 44.25 3.41
6994 10142 5.411103 AGATGGGAGTACCTAGAACTCAT 57.589 43.478 20.28 11.09 44.25 2.90
6995 10143 5.390387 AGATGGGAGTACCTAGAACTCATC 58.610 45.833 20.28 16.59 44.25 2.92
6996 10144 4.883021 TGGGAGTACCTAGAACTCATCT 57.117 45.455 20.28 0.00 44.25 2.90
6997 10145 5.988865 TGGGAGTACCTAGAACTCATCTA 57.011 43.478 20.28 5.84 44.25 1.98
7015 10163 7.348080 TCATCTAGATGAGACGTAATTTGGT 57.652 36.000 27.93 0.00 42.42 3.67
7016 10164 7.426410 TCATCTAGATGAGACGTAATTTGGTC 58.574 38.462 27.93 1.46 42.42 4.02
7017 10165 7.285629 TCATCTAGATGAGACGTAATTTGGTCT 59.714 37.037 27.93 9.96 45.71 3.85
7025 10173 4.935808 AGACGTAATTTGGTCTCATTCACC 59.064 41.667 5.52 0.00 39.18 4.02
7026 10174 4.906618 ACGTAATTTGGTCTCATTCACCT 58.093 39.130 0.00 0.00 34.66 4.00
7027 10175 6.045072 ACGTAATTTGGTCTCATTCACCTA 57.955 37.500 0.00 0.00 34.66 3.08
7028 10176 6.469410 ACGTAATTTGGTCTCATTCACCTAA 58.531 36.000 0.00 0.00 34.66 2.69
7029 10177 6.938030 ACGTAATTTGGTCTCATTCACCTAAA 59.062 34.615 0.00 0.00 33.23 1.85
7030 10178 7.446013 ACGTAATTTGGTCTCATTCACCTAAAA 59.554 33.333 0.00 0.00 33.23 1.52
7031 10179 8.293867 CGTAATTTGGTCTCATTCACCTAAAAA 58.706 33.333 0.00 0.00 33.23 1.94
7058 10206 2.763651 GGATACAACCCACGTCAGC 58.236 57.895 0.00 0.00 0.00 4.26
7059 10207 0.036765 GGATACAACCCACGTCAGCA 60.037 55.000 0.00 0.00 0.00 4.41
7060 10208 1.076332 GATACAACCCACGTCAGCAC 58.924 55.000 0.00 0.00 0.00 4.40
7061 10209 0.394938 ATACAACCCACGTCAGCACA 59.605 50.000 0.00 0.00 0.00 4.57
7062 10210 0.531090 TACAACCCACGTCAGCACAC 60.531 55.000 0.00 0.00 0.00 3.82
7063 10211 1.817520 CAACCCACGTCAGCACACA 60.818 57.895 0.00 0.00 0.00 3.72
7064 10212 1.817941 AACCCACGTCAGCACACAC 60.818 57.895 0.00 0.00 0.00 3.82
7065 10213 3.337889 CCCACGTCAGCACACACG 61.338 66.667 0.00 0.00 41.90 4.49
7066 10214 4.000557 CCACGTCAGCACACACGC 62.001 66.667 0.00 0.00 39.73 5.34
7067 10215 3.261216 CACGTCAGCACACACGCA 61.261 61.111 0.00 0.00 39.73 5.24
7068 10216 2.280119 ACGTCAGCACACACGCAT 60.280 55.556 0.00 0.00 39.73 4.73
7069 10217 2.310233 ACGTCAGCACACACGCATC 61.310 57.895 0.00 0.00 39.73 3.91
7070 10218 2.023771 CGTCAGCACACACGCATCT 61.024 57.895 0.00 0.00 0.00 2.90
7071 10219 1.560004 CGTCAGCACACACGCATCTT 61.560 55.000 0.00 0.00 0.00 2.40
7072 10220 1.428448 GTCAGCACACACGCATCTTA 58.572 50.000 0.00 0.00 0.00 2.10
7073 10221 2.002586 GTCAGCACACACGCATCTTAT 58.997 47.619 0.00 0.00 0.00 1.73
7074 10222 3.186909 GTCAGCACACACGCATCTTATA 58.813 45.455 0.00 0.00 0.00 0.98
7075 10223 3.243877 GTCAGCACACACGCATCTTATAG 59.756 47.826 0.00 0.00 0.00 1.31
7076 10224 2.033407 CAGCACACACGCATCTTATAGC 60.033 50.000 0.00 0.00 0.00 2.97
7077 10225 1.933181 GCACACACGCATCTTATAGCA 59.067 47.619 0.00 0.00 0.00 3.49
7078 10226 2.545526 GCACACACGCATCTTATAGCAT 59.454 45.455 0.00 0.00 0.00 3.79
7079 10227 3.363378 GCACACACGCATCTTATAGCATC 60.363 47.826 0.00 0.00 0.00 3.91
7080 10228 3.803778 CACACACGCATCTTATAGCATCA 59.196 43.478 0.00 0.00 0.00 3.07
7081 10229 3.804325 ACACACGCATCTTATAGCATCAC 59.196 43.478 0.00 0.00 0.00 3.06
7082 10230 3.803778 CACACGCATCTTATAGCATCACA 59.196 43.478 0.00 0.00 0.00 3.58
7083 10231 4.450080 CACACGCATCTTATAGCATCACAT 59.550 41.667 0.00 0.00 0.00 3.21
7084 10232 4.687948 ACACGCATCTTATAGCATCACATC 59.312 41.667 0.00 0.00 0.00 3.06
7085 10233 4.092529 CACGCATCTTATAGCATCACATCC 59.907 45.833 0.00 0.00 0.00 3.51
7086 10234 4.248058 CGCATCTTATAGCATCACATCCA 58.752 43.478 0.00 0.00 0.00 3.41
7087 10235 4.692155 CGCATCTTATAGCATCACATCCAA 59.308 41.667 0.00 0.00 0.00 3.53
7088 10236 5.353400 CGCATCTTATAGCATCACATCCAAT 59.647 40.000 0.00 0.00 0.00 3.16
7089 10237 6.536224 CGCATCTTATAGCATCACATCCAATA 59.464 38.462 0.00 0.00 0.00 1.90
7090 10238 7.254353 CGCATCTTATAGCATCACATCCAATAG 60.254 40.741 0.00 0.00 0.00 1.73
7091 10239 7.466996 GCATCTTATAGCATCACATCCAATAGC 60.467 40.741 0.00 0.00 0.00 2.97
7092 10240 7.250032 TCTTATAGCATCACATCCAATAGCT 57.750 36.000 0.00 0.00 34.84 3.32
7093 10241 8.366359 TCTTATAGCATCACATCCAATAGCTA 57.634 34.615 0.00 0.00 37.49 3.32
7094 10242 8.985922 TCTTATAGCATCACATCCAATAGCTAT 58.014 33.333 0.00 0.00 43.70 2.97
7098 10246 9.964354 ATAGCATCACATCCAATAGCTATAAAA 57.036 29.630 6.68 0.00 40.75 1.52
7099 10247 8.874744 AGCATCACATCCAATAGCTATAAAAT 57.125 30.769 6.68 0.00 0.00 1.82
7100 10248 9.964354 AGCATCACATCCAATAGCTATAAAATA 57.036 29.630 6.68 0.00 0.00 1.40
7150 10298 7.897575 CTAGATGAGTTCTAGCAAAACTGTT 57.102 36.000 0.32 0.00 45.63 3.16
7151 10299 8.988064 CTAGATGAGTTCTAGCAAAACTGTTA 57.012 34.615 0.32 0.00 45.63 2.41
7159 10307 8.669243 AGTTCTAGCAAAACTGTTATTAGATGC 58.331 33.333 0.00 0.00 35.68 3.91
7162 10310 5.644644 AGCAAAACTGTTATTAGATGCTGC 58.355 37.500 10.74 0.00 0.00 5.25
7197 10345 7.971183 AGTTTTCTCGCTTTCTCTTCTATTT 57.029 32.000 0.00 0.00 0.00 1.40
7256 10565 5.762179 TCATGTACTTTGGAACAGGAGAT 57.238 39.130 0.00 0.00 42.39 2.75
7277 10586 1.002069 ATCCCAAGGATGTGAAGGCA 58.998 50.000 0.00 0.00 41.43 4.75
7350 10659 1.676746 CTCTTGATCCAGGGTGCATG 58.323 55.000 0.00 0.00 0.00 4.06
7354 10663 3.072038 TCTTGATCCAGGGTGCATGATAG 59.928 47.826 0.00 0.00 0.00 2.08
7452 10761 8.029642 ACCTTGTACAGAATTTATTCTTGTCG 57.970 34.615 2.27 0.00 44.28 4.35
7453 10762 7.876068 ACCTTGTACAGAATTTATTCTTGTCGA 59.124 33.333 2.27 0.00 44.28 4.20
7454 10763 8.883731 CCTTGTACAGAATTTATTCTTGTCGAT 58.116 33.333 2.27 0.00 44.28 3.59
7557 10875 5.047188 TGCATACGTACATGGTTGTCATAG 58.953 41.667 0.00 0.00 37.28 2.23
7561 10879 4.901868 ACGTACATGGTTGTCATAGGTTT 58.098 39.130 0.00 0.00 37.28 3.27
7569 10887 3.754850 GGTTGTCATAGGTTTGTGGGTAC 59.245 47.826 0.00 0.00 0.00 3.34
7582 10900 4.717279 TGTGGGTACTAGCTTTCCTTTT 57.283 40.909 0.00 0.00 0.00 2.27
7607 10925 1.942657 CAGTTCACACAAGTCACCCAG 59.057 52.381 0.00 0.00 0.00 4.45
7618 10936 3.279116 CACCCAGTGGCACGTGTG 61.279 66.667 18.38 15.99 33.59 3.82
7625 10943 0.884704 AGTGGCACGTGTGGTCATTC 60.885 55.000 18.38 0.00 0.00 2.67
7632 10950 3.676049 GCACGTGTGGTCATTCTAGATCA 60.676 47.826 18.38 0.00 0.00 2.92
7707 11025 4.062991 GAGTAAAGGCGAAGAAAACAGGA 58.937 43.478 0.00 0.00 0.00 3.86
7708 11026 4.457466 AGTAAAGGCGAAGAAAACAGGAA 58.543 39.130 0.00 0.00 0.00 3.36
7709 11027 4.885325 AGTAAAGGCGAAGAAAACAGGAAA 59.115 37.500 0.00 0.00 0.00 3.13
7710 11028 4.729227 AAAGGCGAAGAAAACAGGAAAA 57.271 36.364 0.00 0.00 0.00 2.29
7751 11069 9.395707 GTTATTCAGGTGTCGTACTTATGATAG 57.604 37.037 0.00 0.00 0.00 2.08
7755 11073 7.052248 TCAGGTGTCGTACTTATGATAGAAGA 58.948 38.462 0.00 0.00 0.00 2.87
7760 11078 8.065407 GTGTCGTACTTATGATAGAAGAGACAG 58.935 40.741 11.01 0.00 37.21 3.51
7767 11093 8.058847 ACTTATGATAGAAGAGACAGGAAGAGT 58.941 37.037 0.00 0.00 0.00 3.24
7769 11095 5.821097 TGATAGAAGAGACAGGAAGAGTGA 58.179 41.667 0.00 0.00 0.00 3.41
7850 11176 7.023197 ACACCAGTTTTATGTTGTCAACTAC 57.977 36.000 16.45 7.16 0.00 2.73
7865 11191 8.648097 GTTGTCAACTACTATGTATGTTGAGTG 58.352 37.037 8.53 0.00 45.93 3.51
7869 11195 9.419297 TCAACTACTATGTATGTTGAGTGAAAC 57.581 33.333 13.38 0.00 42.25 2.78
7885 11211 6.378564 TGAGTGAAACATGTTGGAGGTTTTAA 59.621 34.615 12.82 0.00 38.65 1.52
7895 11221 6.007703 TGTTGGAGGTTTTAATTCTACCTGG 58.992 40.000 9.95 0.00 42.21 4.45
7902 11228 9.239551 GAGGTTTTAATTCTACCTGGTTAATGT 57.760 33.333 3.84 0.77 42.21 2.71
7933 11259 6.170506 AGTCTCAACACTTTACAAAGACACA 58.829 36.000 8.65 0.00 39.31 3.72
7955 11531 6.318900 CACATTTAGGTCCCAATCTTTACTCC 59.681 42.308 0.00 0.00 0.00 3.85
7959 11535 9.684702 ATTTAGGTCCCAATCTTTACTCCTATA 57.315 33.333 0.00 0.00 0.00 1.31
8017 11897 3.639561 AGGGAAACTAAAAATGCAACCGT 59.360 39.130 0.00 0.00 0.00 4.83
8019 11899 5.048294 AGGGAAACTAAAAATGCAACCGTAG 60.048 40.000 0.00 0.00 0.00 3.51
8035 11915 4.638304 ACCGTAGAAGCAACATGTACTTT 58.362 39.130 13.57 2.60 0.00 2.66
8045 11925 7.133891 AGCAACATGTACTTTGTACTTCATC 57.866 36.000 0.00 0.00 0.00 2.92
8068 11948 5.069648 TCCCAAATCAATACAACACAAGCAA 59.930 36.000 0.00 0.00 0.00 3.91
8089 11969 5.585047 GCAAGACGTAGGGTTTTATCTCATT 59.415 40.000 0.00 0.00 0.00 2.57
8090 11970 6.456988 GCAAGACGTAGGGTTTTATCTCATTG 60.457 42.308 0.00 0.00 0.00 2.82
8091 11971 5.671493 AGACGTAGGGTTTTATCTCATTGG 58.329 41.667 0.00 0.00 0.00 3.16
8112 11992 1.900486 AGAGTCCGAACCTGGGTAAAG 59.100 52.381 0.00 0.00 0.00 1.85
8115 11995 0.978907 TCCGAACCTGGGTAAAGTCC 59.021 55.000 0.00 0.00 0.00 3.85
8133 12089 5.615925 AGTCCCTTGTCTATGTTACCATC 57.384 43.478 0.00 0.00 32.29 3.51
8146 12102 5.434352 TGTTACCATCGCATCTAGACTAC 57.566 43.478 0.00 0.00 0.00 2.73
8150 12106 4.975631 ACCATCGCATCTAGACTACTAGT 58.024 43.478 0.00 0.00 44.45 2.57
8152 12108 5.470777 ACCATCGCATCTAGACTACTAGTTC 59.529 44.000 0.00 0.00 44.45 3.01
8157 12113 4.213906 GCATCTAGACTACTAGTTCGGGAC 59.786 50.000 0.00 0.00 44.45 4.46
8158 12114 5.613329 CATCTAGACTACTAGTTCGGGACT 58.387 45.833 0.00 0.00 44.45 3.85
8161 12117 2.092484 AGACTACTAGTTCGGGACTCCC 60.092 54.545 0.00 3.63 39.86 4.30
8176 12132 0.468214 CTCCCTACCCGAGATCTGCA 60.468 60.000 0.00 0.00 0.00 4.41
8177 12133 0.188587 TCCCTACCCGAGATCTGCAT 59.811 55.000 0.00 0.00 0.00 3.96
8194 12150 1.398390 GCATCAATTGACTCCGTCACC 59.602 52.381 11.07 0.00 42.60 4.02
8206 12162 1.302511 CGTCACCTGGGTTGAAGGG 60.303 63.158 0.00 0.00 39.30 3.95
8295 12251 2.555199 ACCTTAATAGCGAGCTTGCAG 58.445 47.619 27.59 15.09 37.31 4.41
8348 12372 1.226262 GCCCATGTCCACCGGTTAT 59.774 57.895 2.97 0.00 0.00 1.89
8378 12402 8.177119 TGTTTCTATAAACTTGCAAACCTCAT 57.823 30.769 0.00 0.00 44.44 2.90
8423 12447 0.888619 TCCGTGTAGCTCTTGTCAGG 59.111 55.000 0.00 0.00 0.00 3.86
8461 12485 5.138276 TGTCCTAGAAGTGTGTTCTGTACT 58.862 41.667 0.00 0.00 0.00 2.73
8462 12486 6.301486 TGTCCTAGAAGTGTGTTCTGTACTA 58.699 40.000 0.00 0.00 0.00 1.82
8463 12487 6.430308 TGTCCTAGAAGTGTGTTCTGTACTAG 59.570 42.308 0.00 0.00 0.00 2.57
8464 12488 6.430616 GTCCTAGAAGTGTGTTCTGTACTAGT 59.569 42.308 0.00 0.00 0.00 2.57
8530 12556 9.906660 TTCACAAATACAAGATGTTTTGGATAC 57.093 29.630 15.63 0.00 35.12 2.24
8557 12594 9.952030 TTTAATATGGACTACAATGAGTGAACA 57.048 29.630 0.00 0.00 0.00 3.18
8638 12679 3.491766 TGGGAATTGAGGGACTAGTCT 57.508 47.619 21.88 3.41 41.55 3.24
8645 12686 5.622346 ATTGAGGGACTAGTCTTCCATTC 57.378 43.478 21.88 10.64 41.55 2.67
8675 12716 5.178061 CCTGGTCCCAATTTGAATTAAAGC 58.822 41.667 0.00 0.00 0.00 3.51
8682 12723 8.470002 GTCCCAATTTGAATTAAAGCATACTCT 58.530 33.333 0.00 0.00 0.00 3.24
8683 12724 9.034800 TCCCAATTTGAATTAAAGCATACTCTT 57.965 29.630 0.00 0.00 0.00 2.85
8705 12746 9.256477 CTCTTGTACTGTTGTTGTTTAGTCATA 57.744 33.333 0.00 0.00 0.00 2.15
8716 12757 6.014925 TGTTGTTTAGTCATAGTAGGAGTGCA 60.015 38.462 2.38 0.00 0.00 4.57
8769 12811 8.358895 TCTATGATTTGAACTTGCATGAAAACA 58.641 29.630 6.60 2.72 0.00 2.83
8796 12838 7.828223 AGAGCTTTTCAATCTTGATGACATACT 59.172 33.333 0.00 0.00 37.00 2.12
8807 12849 7.712797 TCTTGATGACATACTAATAGCGACAA 58.287 34.615 0.00 0.00 0.00 3.18
8823 12865 4.663636 CGACAACGCTTATCTTCCTTTT 57.336 40.909 0.00 0.00 0.00 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.157656 CCGAAGGCCAACTCATGAAAAATA 59.842 41.667 5.01 0.00 46.14 1.40
1 2 3.056607 CCGAAGGCCAACTCATGAAAAAT 60.057 43.478 5.01 0.00 46.14 1.82
3 4 1.885887 CCGAAGGCCAACTCATGAAAA 59.114 47.619 5.01 0.00 46.14 2.29
4 5 1.533625 CCGAAGGCCAACTCATGAAA 58.466 50.000 5.01 0.00 46.14 2.69
5 6 3.248043 CCGAAGGCCAACTCATGAA 57.752 52.632 5.01 0.00 46.14 2.57
56 57 8.830580 CACCTGAATTTATTACACGATTCTCAT 58.169 33.333 0.00 0.00 31.48 2.90
57 58 7.822334 ACACCTGAATTTATTACACGATTCTCA 59.178 33.333 0.00 0.00 31.48 3.27
58 59 8.116753 CACACCTGAATTTATTACACGATTCTC 58.883 37.037 0.00 0.00 31.48 2.87
59 60 7.822334 TCACACCTGAATTTATTACACGATTCT 59.178 33.333 0.00 0.00 31.48 2.40
60 61 7.970384 TCACACCTGAATTTATTACACGATTC 58.030 34.615 0.00 0.00 0.00 2.52
61 62 7.915293 TCACACCTGAATTTATTACACGATT 57.085 32.000 0.00 0.00 0.00 3.34
62 63 8.397906 CAATCACACCTGAATTTATTACACGAT 58.602 33.333 0.00 0.00 0.00 3.73
63 64 7.604545 TCAATCACACCTGAATTTATTACACGA 59.395 33.333 0.00 0.00 0.00 4.35
64 65 7.747888 TCAATCACACCTGAATTTATTACACG 58.252 34.615 0.00 0.00 0.00 4.49
65 66 9.341899 GTTCAATCACACCTGAATTTATTACAC 57.658 33.333 0.00 0.00 34.26 2.90
66 67 9.295825 AGTTCAATCACACCTGAATTTATTACA 57.704 29.630 0.00 0.00 34.26 2.41
73 74 9.696917 GATTTAAAGTTCAATCACACCTGAATT 57.303 29.630 0.00 0.00 34.26 2.17
74 75 9.082313 AGATTTAAAGTTCAATCACACCTGAAT 57.918 29.630 9.37 0.00 34.26 2.57
75 76 8.463930 AGATTTAAAGTTCAATCACACCTGAA 57.536 30.769 9.37 0.00 32.61 3.02
76 77 8.463930 AAGATTTAAAGTTCAATCACACCTGA 57.536 30.769 9.37 0.00 32.61 3.86
77 78 9.533253 AAAAGATTTAAAGTTCAATCACACCTG 57.467 29.630 9.37 0.00 32.61 4.00
78 79 9.750125 GAAAAGATTTAAAGTTCAATCACACCT 57.250 29.630 9.37 0.00 32.61 4.00
79 80 9.528018 TGAAAAGATTTAAAGTTCAATCACACC 57.472 29.630 9.37 0.27 32.61 4.16
95 96 8.632679 ACACACAGTACATTGATGAAAAGATTT 58.367 29.630 0.00 0.00 0.00 2.17
96 97 8.077991 CACACACAGTACATTGATGAAAAGATT 58.922 33.333 0.00 0.00 0.00 2.40
97 98 7.587629 CACACACAGTACATTGATGAAAAGAT 58.412 34.615 0.00 0.00 0.00 2.40
98 99 6.513230 GCACACACAGTACATTGATGAAAAGA 60.513 38.462 0.00 0.00 0.00 2.52
99 100 5.626543 GCACACACAGTACATTGATGAAAAG 59.373 40.000 0.00 0.00 0.00 2.27
100 101 5.507149 GGCACACACAGTACATTGATGAAAA 60.507 40.000 0.00 0.00 0.00 2.29
101 102 4.023279 GGCACACACAGTACATTGATGAAA 60.023 41.667 0.00 0.00 0.00 2.69
102 103 3.501828 GGCACACACAGTACATTGATGAA 59.498 43.478 0.00 0.00 0.00 2.57
103 104 3.073678 GGCACACACAGTACATTGATGA 58.926 45.455 0.00 0.00 0.00 2.92
104 105 2.813172 TGGCACACACAGTACATTGATG 59.187 45.455 0.00 0.00 0.00 3.07
105 106 3.076621 CTGGCACACACAGTACATTGAT 58.923 45.455 0.00 0.00 0.00 2.57
106 107 2.493035 CTGGCACACACAGTACATTGA 58.507 47.619 0.00 0.00 0.00 2.57
107 108 1.069022 GCTGGCACACACAGTACATTG 60.069 52.381 0.00 0.00 38.22 2.82
108 109 1.238439 GCTGGCACACACAGTACATT 58.762 50.000 0.00 0.00 38.22 2.71
109 110 0.108396 TGCTGGCACACACAGTACAT 59.892 50.000 0.00 0.00 38.22 2.29
110 111 0.108396 ATGCTGGCACACACAGTACA 59.892 50.000 0.00 0.00 38.22 2.90
111 112 1.197721 GAATGCTGGCACACACAGTAC 59.802 52.381 0.00 0.00 38.22 2.73
112 113 1.072173 AGAATGCTGGCACACACAGTA 59.928 47.619 0.00 0.00 38.22 2.74
113 114 0.179009 AGAATGCTGGCACACACAGT 60.179 50.000 0.00 0.00 38.22 3.55
114 115 0.956633 AAGAATGCTGGCACACACAG 59.043 50.000 0.00 0.00 38.95 3.66
115 116 0.669619 CAAGAATGCTGGCACACACA 59.330 50.000 0.00 0.00 0.00 3.72
116 117 0.038892 CCAAGAATGCTGGCACACAC 60.039 55.000 0.00 0.00 0.00 3.82
117 118 1.180456 CCCAAGAATGCTGGCACACA 61.180 55.000 0.00 0.00 0.00 3.72
118 119 0.895100 TCCCAAGAATGCTGGCACAC 60.895 55.000 0.00 0.00 0.00 3.82
119 120 0.040058 ATCCCAAGAATGCTGGCACA 59.960 50.000 0.00 0.00 0.00 4.57
120 121 0.458669 CATCCCAAGAATGCTGGCAC 59.541 55.000 0.00 0.00 0.00 5.01
121 122 0.332293 TCATCCCAAGAATGCTGGCA 59.668 50.000 0.00 0.00 0.00 4.92
122 123 1.700955 ATCATCCCAAGAATGCTGGC 58.299 50.000 0.00 0.00 0.00 4.85
123 124 3.819337 CTGTATCATCCCAAGAATGCTGG 59.181 47.826 0.00 0.00 0.00 4.85
124 125 3.252701 GCTGTATCATCCCAAGAATGCTG 59.747 47.826 0.00 0.00 0.00 4.41
125 126 3.137913 AGCTGTATCATCCCAAGAATGCT 59.862 43.478 0.00 0.00 0.00 3.79
126 127 3.484407 AGCTGTATCATCCCAAGAATGC 58.516 45.455 0.00 0.00 0.00 3.56
127 128 5.468072 GTGTAGCTGTATCATCCCAAGAATG 59.532 44.000 0.00 0.00 0.00 2.67
128 129 5.130975 TGTGTAGCTGTATCATCCCAAGAAT 59.869 40.000 0.00 0.00 0.00 2.40
129 130 4.469586 TGTGTAGCTGTATCATCCCAAGAA 59.530 41.667 0.00 0.00 0.00 2.52
130 131 4.030216 TGTGTAGCTGTATCATCCCAAGA 58.970 43.478 0.00 0.00 0.00 3.02
131 132 4.100035 TCTGTGTAGCTGTATCATCCCAAG 59.900 45.833 0.00 0.00 0.00 3.61
132 133 4.030216 TCTGTGTAGCTGTATCATCCCAA 58.970 43.478 0.00 0.00 0.00 4.12
133 134 3.638627 CTCTGTGTAGCTGTATCATCCCA 59.361 47.826 0.00 0.00 0.00 4.37
134 135 3.891977 TCTCTGTGTAGCTGTATCATCCC 59.108 47.826 0.00 0.00 0.00 3.85
135 136 4.582656 AGTCTCTGTGTAGCTGTATCATCC 59.417 45.833 0.00 0.00 0.00 3.51
136 137 5.766150 AGTCTCTGTGTAGCTGTATCATC 57.234 43.478 0.00 0.00 0.00 2.92
137 138 5.654209 TCAAGTCTCTGTGTAGCTGTATCAT 59.346 40.000 0.00 0.00 0.00 2.45
138 139 5.010282 TCAAGTCTCTGTGTAGCTGTATCA 58.990 41.667 0.00 0.00 0.00 2.15
139 140 5.336744 GTCAAGTCTCTGTGTAGCTGTATC 58.663 45.833 0.00 0.00 0.00 2.24
140 141 4.158764 GGTCAAGTCTCTGTGTAGCTGTAT 59.841 45.833 0.00 0.00 0.00 2.29
141 142 3.506455 GGTCAAGTCTCTGTGTAGCTGTA 59.494 47.826 0.00 0.00 0.00 2.74
142 143 2.297597 GGTCAAGTCTCTGTGTAGCTGT 59.702 50.000 0.00 0.00 0.00 4.40
143 144 2.669670 CGGTCAAGTCTCTGTGTAGCTG 60.670 54.545 0.00 0.00 0.00 4.24
144 145 1.542030 CGGTCAAGTCTCTGTGTAGCT 59.458 52.381 0.00 0.00 0.00 3.32
145 146 1.540267 TCGGTCAAGTCTCTGTGTAGC 59.460 52.381 0.00 0.00 0.00 3.58
146 147 4.442375 AATCGGTCAAGTCTCTGTGTAG 57.558 45.455 0.00 0.00 0.00 2.74
147 148 4.615223 CGAAATCGGTCAAGTCTCTGTGTA 60.615 45.833 0.00 0.00 35.37 2.90
148 149 3.654414 GAAATCGGTCAAGTCTCTGTGT 58.346 45.455 0.00 0.00 0.00 3.72
149 150 2.663602 CGAAATCGGTCAAGTCTCTGTG 59.336 50.000 0.00 0.00 35.37 3.66
150 151 2.947852 CGAAATCGGTCAAGTCTCTGT 58.052 47.619 0.00 0.00 35.37 3.41
163 164 0.952010 AACGACCCAACCCGAAATCG 60.952 55.000 0.00 0.00 39.44 3.34
164 165 1.733912 GTAACGACCCAACCCGAAATC 59.266 52.381 0.00 0.00 0.00 2.17
165 166 1.072015 TGTAACGACCCAACCCGAAAT 59.928 47.619 0.00 0.00 0.00 2.17
166 167 0.467384 TGTAACGACCCAACCCGAAA 59.533 50.000 0.00 0.00 0.00 3.46
167 168 0.467384 TTGTAACGACCCAACCCGAA 59.533 50.000 0.00 0.00 0.00 4.30
168 169 0.033781 CTTGTAACGACCCAACCCGA 59.966 55.000 0.00 0.00 0.00 5.14
169 170 0.952010 CCTTGTAACGACCCAACCCG 60.952 60.000 0.00 0.00 0.00 5.28
170 171 1.239296 GCCTTGTAACGACCCAACCC 61.239 60.000 0.00 0.00 0.00 4.11
171 172 0.250597 AGCCTTGTAACGACCCAACC 60.251 55.000 0.00 0.00 0.00 3.77
172 173 1.154197 GAGCCTTGTAACGACCCAAC 58.846 55.000 0.00 0.00 0.00 3.77
173 174 0.035739 GGAGCCTTGTAACGACCCAA 59.964 55.000 0.00 0.00 0.00 4.12
174 175 0.834687 AGGAGCCTTGTAACGACCCA 60.835 55.000 0.00 0.00 0.00 4.51
175 176 0.323957 AAGGAGCCTTGTAACGACCC 59.676 55.000 0.00 0.00 34.60 4.46
176 177 2.180432 AAAGGAGCCTTGTAACGACC 57.820 50.000 1.91 0.00 36.26 4.79
250 251 9.127006 CAAACAAAAAGAAGGAACCAAAAATTG 57.873 29.630 0.00 0.00 0.00 2.32
263 267 8.729756 AGGAAAATCAAACCAAACAAAAAGAAG 58.270 29.630 0.00 0.00 0.00 2.85
270 274 7.040132 AGCAAAAAGGAAAATCAAACCAAACAA 60.040 29.630 0.00 0.00 0.00 2.83
280 284 7.920160 AAAAGAACAGCAAAAAGGAAAATCA 57.080 28.000 0.00 0.00 0.00 2.57
387 392 9.921637 TTTGTATATTCCAGAATTGGTGTTTTC 57.078 29.630 0.00 0.00 45.26 2.29
391 396 8.469200 CATGTTTGTATATTCCAGAATTGGTGT 58.531 33.333 0.00 0.00 45.26 4.16
488 495 7.447374 TTCGTGTATTCCAAAATTGATCACT 57.553 32.000 0.00 0.00 0.00 3.41
774 785 7.446001 TTCTTTGGAAAAACTGTTGCATTTT 57.554 28.000 0.00 0.00 0.00 1.82
775 786 6.403527 GCTTCTTTGGAAAAACTGTTGCATTT 60.404 34.615 0.00 0.00 0.00 2.32
776 787 5.065090 GCTTCTTTGGAAAAACTGTTGCATT 59.935 36.000 0.00 0.00 0.00 3.56
777 788 4.571984 GCTTCTTTGGAAAAACTGTTGCAT 59.428 37.500 0.00 0.00 0.00 3.96
988 1055 2.555199 CTAGTAATGTGCTCACTGGCC 58.445 52.381 0.00 0.00 0.00 5.36
1004 1071 3.643792 GTGTGGAAGGAGGATATGCTAGT 59.356 47.826 0.00 0.00 0.00 2.57
1079 1150 2.685380 AGGAGAGGACTTGGCGGG 60.685 66.667 0.00 0.00 0.00 6.13
1081 1152 1.671901 GGAGAGGAGAGGACTTGGCG 61.672 65.000 0.00 0.00 0.00 5.69
1082 1153 1.334384 GGGAGAGGAGAGGACTTGGC 61.334 65.000 0.00 0.00 0.00 4.52
1083 1154 0.338120 AGGGAGAGGAGAGGACTTGG 59.662 60.000 0.00 0.00 0.00 3.61
1085 1156 0.257616 CGAGGGAGAGGAGAGGACTT 59.742 60.000 0.00 0.00 0.00 3.01
1087 1158 1.826487 GCGAGGGAGAGGAGAGGAC 60.826 68.421 0.00 0.00 0.00 3.85
1088 1159 2.598467 GCGAGGGAGAGGAGAGGA 59.402 66.667 0.00 0.00 0.00 3.71
1089 1160 2.520741 GGCGAGGGAGAGGAGAGG 60.521 72.222 0.00 0.00 0.00 3.69
1090 1161 1.827789 CAGGCGAGGGAGAGGAGAG 60.828 68.421 0.00 0.00 0.00 3.20
1091 1162 2.277072 CAGGCGAGGGAGAGGAGA 59.723 66.667 0.00 0.00 0.00 3.71
1092 1163 2.655077 ATCCAGGCGAGGGAGAGGAG 62.655 65.000 0.00 0.00 37.96 3.69
1206 1277 1.150536 CCTCCTCCTCCTCCTCGAG 59.849 68.421 5.13 5.13 0.00 4.04
1359 1436 0.172578 TACTCGCCGTTGAGACCATG 59.827 55.000 8.02 0.00 39.35 3.66
1416 1493 1.047801 GAGGAGGGAGGCTTCAGATC 58.952 60.000 0.00 0.00 0.00 2.75
1733 1810 3.121030 CCGAGGTCCTTGCAAGCG 61.121 66.667 21.43 17.28 0.00 4.68
1847 1924 3.574445 GAGATGCGCCAGCTGCTG 61.574 66.667 22.44 22.44 45.42 4.41
1848 1925 4.853050 GGAGATGCGCCAGCTGCT 62.853 66.667 8.66 0.00 45.42 4.24
1908 1985 1.377333 GGAAGCTGGTGGTAGTGGC 60.377 63.158 0.00 0.00 0.00 5.01
1944 2021 3.432252 GGATGTGTCAAGGAGTAACAACG 59.568 47.826 0.00 0.00 0.00 4.10
1945 2022 3.432252 CGGATGTGTCAAGGAGTAACAAC 59.568 47.826 0.00 0.00 0.00 3.32
1954 2031 1.432514 CACAGACGGATGTGTCAAGG 58.567 55.000 12.61 0.00 44.49 3.61
1972 2161 1.968704 ACTAGCCGATCGATCTCACA 58.031 50.000 22.43 5.33 0.00 3.58
1973 2162 2.663334 CGAACTAGCCGATCGATCTCAC 60.663 54.545 22.43 11.68 39.95 3.51
1974 2163 1.531578 CGAACTAGCCGATCGATCTCA 59.468 52.381 22.43 4.67 39.95 3.27
2008 2223 1.276421 CCCCGGCTAGAGTTGATATGG 59.724 57.143 0.00 0.00 0.00 2.74
2011 2226 2.437625 GCCCCGGCTAGAGTTGATA 58.562 57.895 0.00 0.00 38.26 2.15
2042 2257 0.382515 CGTTTGGGAAGCCAAAACGA 59.617 50.000 26.57 0.00 40.66 3.85
2071 2286 8.383947 GCTCTTATATTAATTTACAGAGGGGGT 58.616 37.037 16.85 0.00 0.00 4.95
2072 2287 7.549488 CGCTCTTATATTAATTTACAGAGGGGG 59.451 40.741 19.39 8.52 36.63 5.40
2073 2288 8.095169 ACGCTCTTATATTAATTTACAGAGGGG 58.905 37.037 24.14 16.10 41.66 4.79
2074 2289 9.490379 AACGCTCTTATATTAATTTACAGAGGG 57.510 33.333 21.96 21.96 42.53 4.30
2093 2308 9.733219 GTACTAAAGTAATGATCTAAACGCTCT 57.267 33.333 0.00 0.00 31.52 4.09
2094 2309 9.733219 AGTACTAAAGTAATGATCTAAACGCTC 57.267 33.333 0.00 0.00 31.52 5.03
2135 2350 8.826765 TCAGAATTACTCCCTCTGAAAACTAAT 58.173 33.333 0.00 0.00 41.94 1.73
2136 2351 8.202461 TCAGAATTACTCCCTCTGAAAACTAA 57.798 34.615 0.00 0.00 41.94 2.24
2137 2352 7.792364 TCAGAATTACTCCCTCTGAAAACTA 57.208 36.000 0.00 0.00 41.94 2.24
2138 2353 6.688073 TCAGAATTACTCCCTCTGAAAACT 57.312 37.500 0.00 0.00 41.94 2.66
2139 2354 7.929941 AATCAGAATTACTCCCTCTGAAAAC 57.070 36.000 5.20 0.00 46.38 2.43
2140 2355 8.940397 AAAATCAGAATTACTCCCTCTGAAAA 57.060 30.769 5.20 0.00 46.38 2.29
2141 2356 8.386264 AGAAAATCAGAATTACTCCCTCTGAAA 58.614 33.333 5.20 0.00 46.38 2.69
2142 2357 7.922382 AGAAAATCAGAATTACTCCCTCTGAA 58.078 34.615 5.20 0.00 46.38 3.02
2144 2359 8.572855 AAAGAAAATCAGAATTACTCCCTCTG 57.427 34.615 0.00 0.00 38.34 3.35
2145 2360 9.018582 CAAAAGAAAATCAGAATTACTCCCTCT 57.981 33.333 0.00 0.00 0.00 3.69
2146 2361 8.797438 ACAAAAGAAAATCAGAATTACTCCCTC 58.203 33.333 0.00 0.00 0.00 4.30
2147 2362 8.712228 ACAAAAGAAAATCAGAATTACTCCCT 57.288 30.769 0.00 0.00 0.00 4.20
2148 2363 9.841880 GTACAAAAGAAAATCAGAATTACTCCC 57.158 33.333 0.00 0.00 0.00 4.30
2153 2368 9.393249 CGCAAGTACAAAAGAAAATCAGAATTA 57.607 29.630 0.00 0.00 0.00 1.40
2265 2486 8.527810 TGAGTATCGAATTTTTGGCCTTTTTAT 58.472 29.630 3.32 0.00 38.61 1.40
2286 2507 9.169592 GCCCTATGTAAAACAATAAGTTGAGTA 57.830 33.333 0.00 0.00 41.19 2.59
2407 2629 4.341806 AGGAGCATTTGTTCATGTTTGTCA 59.658 37.500 0.00 0.00 0.00 3.58
2412 2634 3.006110 CCACAGGAGCATTTGTTCATGTT 59.994 43.478 11.20 0.00 45.33 2.71
2430 2652 1.142667 TGTGTCCAATTCAGCTCCACA 59.857 47.619 0.00 0.00 0.00 4.17
2449 2671 1.376037 GAGAGGTGAAAGCCCCGTG 60.376 63.158 0.00 0.00 32.25 4.94
2510 2732 1.668751 TCGGTTTCTATTCAATGCCGC 59.331 47.619 0.00 0.00 37.86 6.53
2511 2733 4.552166 AATCGGTTTCTATTCAATGCCG 57.448 40.909 0.00 0.00 39.13 5.69
2514 4848 8.335356 ACGACAATAATCGGTTTCTATTCAATG 58.665 33.333 0.00 0.00 46.56 2.82
2581 4922 3.437741 GCAAACCGGCTAGCTAAAAGTAA 59.562 43.478 15.72 0.00 0.00 2.24
2734 5156 4.454161 ACGCTGAAACAAATGTATGTAGCA 59.546 37.500 0.00 0.00 32.02 3.49
2739 5161 6.932901 AATTGACGCTGAAACAAATGTATG 57.067 33.333 0.00 0.00 0.00 2.39
2746 5168 7.277098 GTCCTATACTAATTGACGCTGAAACAA 59.723 37.037 0.00 0.00 0.00 2.83
2824 5254 2.049063 GCTTCAGCGGTGTCGAGT 60.049 61.111 15.22 0.00 39.00 4.18
2828 5258 2.435059 GAGGGCTTCAGCGGTGTC 60.435 66.667 15.22 5.21 43.26 3.67
2936 5366 2.039746 TGATCAAAAGTGTCCGGACCAT 59.960 45.455 31.19 17.16 0.00 3.55
2963 5394 6.553857 TGTAGAAAATACTTTAAAGGGGGCA 58.446 36.000 19.14 3.47 0.00 5.36
2990 5422 2.755049 TCTGGACGTCTCCGGACT 59.245 61.111 16.46 0.00 45.83 3.85
3028 5460 5.068067 TCAACCCTTACACAAGTTTAAAGGC 59.932 40.000 0.00 0.00 36.24 4.35
3048 5480 0.741221 GCATGTCCGGACTCCTCAAC 60.741 60.000 33.39 13.24 0.00 3.18
3091 5523 2.414250 ATGGGTTTGTGATGGGGTTT 57.586 45.000 0.00 0.00 0.00 3.27
3132 5564 2.280628 GTCCAATAAAGCGAGGAGGTG 58.719 52.381 0.00 0.00 0.00 4.00
3209 5641 9.778741 AATATCCATGAACAAGTACGAATATGT 57.221 29.630 0.00 0.00 0.00 2.29
3239 5674 1.811965 CCGCTCATCAATTGGACAACA 59.188 47.619 5.42 0.00 0.00 3.33
3332 5768 4.577693 CACAAATCCTCATCCGTGAATGAT 59.422 41.667 0.00 0.00 35.21 2.45
3367 5803 2.903855 GGACATGCATGCCCCTCG 60.904 66.667 26.53 1.10 0.00 4.63
3368 5804 2.520260 GGGACATGCATGCCCCTC 60.520 66.667 36.35 21.87 45.95 4.30
3473 5913 1.737236 GCGCTGGTCACATGAAATACA 59.263 47.619 0.00 0.00 0.00 2.29
3482 5922 2.177394 TATTGAAAGCGCTGGTCACA 57.823 45.000 20.42 13.39 0.00 3.58
3639 6084 6.590234 AAAGTCAAGTTTCAACCAGTTTCT 57.410 33.333 0.00 0.00 0.00 2.52
3661 6106 4.822896 ACCTACGGTTGTTGCATCTAAAAA 59.177 37.500 0.00 0.00 27.29 1.94
3674 6119 2.660189 AACGGTGATACCTACGGTTG 57.340 50.000 0.00 0.00 39.24 3.77
3682 6128 8.294577 ACTTCAAAGAAAAATAACGGTGATACC 58.705 33.333 0.00 0.00 34.05 2.73
3695 6141 6.128418 CCCGCAAAAAGAACTTCAAAGAAAAA 60.128 34.615 0.00 0.00 0.00 1.94
3697 6143 4.867608 CCCGCAAAAAGAACTTCAAAGAAA 59.132 37.500 0.00 0.00 0.00 2.52
3700 6146 4.040445 TCCCGCAAAAAGAACTTCAAAG 57.960 40.909 0.00 0.00 0.00 2.77
3701 6147 4.664150 ATCCCGCAAAAAGAACTTCAAA 57.336 36.364 0.00 0.00 0.00 2.69
3702 6148 5.776173 TTATCCCGCAAAAAGAACTTCAA 57.224 34.783 0.00 0.00 0.00 2.69
3703 6149 5.300792 AGTTTATCCCGCAAAAAGAACTTCA 59.699 36.000 0.00 0.00 0.00 3.02
3704 6150 5.769367 AGTTTATCCCGCAAAAAGAACTTC 58.231 37.500 0.00 0.00 0.00 3.01
3705 6151 5.784578 AGTTTATCCCGCAAAAAGAACTT 57.215 34.783 0.00 0.00 0.00 2.66
3706 6152 5.784578 AAGTTTATCCCGCAAAAAGAACT 57.215 34.783 0.00 0.00 0.00 3.01
3707 6153 5.980715 TGAAAGTTTATCCCGCAAAAAGAAC 59.019 36.000 0.00 0.00 0.00 3.01
3805 6253 1.805945 CTTGTGGTCGTCGCTAGGC 60.806 63.158 0.00 0.00 0.00 3.93
3818 6266 1.206072 GCTCGCTTCAGTGCTTGTG 59.794 57.895 0.00 0.00 0.00 3.33
3892 6340 4.232188 TGACTTCCCGACTGTCTACTAT 57.768 45.455 6.21 0.00 0.00 2.12
3965 6414 6.263392 TGGATCCTTCTTATCTACACTCTTCG 59.737 42.308 14.23 0.00 0.00 3.79
4004 6453 2.480224 TCGTCGTTCGTCTTTGTTCT 57.520 45.000 0.00 0.00 40.80 3.01
4027 6476 3.706594 TCTCTAGTGGATTTGCTCGGATT 59.293 43.478 0.00 0.00 0.00 3.01
4061 6510 1.549170 GGACGTGTGGAGGTATGTCTT 59.451 52.381 0.00 0.00 34.17 3.01
4067 6516 2.270257 CGGTGGACGTGTGGAGGTA 61.270 63.158 0.00 0.00 37.93 3.08
4079 6528 0.668535 CATCTAGCATCGTCGGTGGA 59.331 55.000 7.76 0.00 0.00 4.02
4097 6546 2.275089 CCCCATTCCGGTGATGCA 59.725 61.111 0.00 0.00 0.00 3.96
4110 6559 4.475444 CTCCCCGCCTAGTCCCCA 62.475 72.222 0.00 0.00 0.00 4.96
4142 6591 4.544689 CGGCGGCGACTCTCTGAG 62.545 72.222 29.19 0.00 35.52 3.35
4171 6620 3.006110 TGTTAGGGTTTGTGTCCTACTCG 59.994 47.826 0.00 0.00 35.56 4.18
4206 6657 1.228459 GTGGGAGGGCTTCGGTTTT 60.228 57.895 0.00 0.00 0.00 2.43
4207 6658 2.434774 GTGGGAGGGCTTCGGTTT 59.565 61.111 0.00 0.00 0.00 3.27
4321 6778 2.711542 CCGCTGTCTACCCAGAAAAAT 58.288 47.619 0.00 0.00 34.23 1.82
4327 6784 2.185350 CAGCCGCTGTCTACCCAG 59.815 66.667 12.54 0.00 35.49 4.45
4376 6834 5.836358 ACAAATACCCTTGAGCCTACAAAAA 59.164 36.000 0.00 0.00 0.00 1.94
4377 6835 5.390387 ACAAATACCCTTGAGCCTACAAAA 58.610 37.500 0.00 0.00 0.00 2.44
4378 6836 4.993028 ACAAATACCCTTGAGCCTACAAA 58.007 39.130 0.00 0.00 0.00 2.83
4379 6837 4.650972 ACAAATACCCTTGAGCCTACAA 57.349 40.909 0.00 0.00 0.00 2.41
4380 6838 4.382254 CGTACAAATACCCTTGAGCCTACA 60.382 45.833 0.00 0.00 0.00 2.74
4381 6839 4.117685 CGTACAAATACCCTTGAGCCTAC 58.882 47.826 0.00 0.00 0.00 3.18
4382 6840 3.770933 ACGTACAAATACCCTTGAGCCTA 59.229 43.478 0.00 0.00 0.00 3.93
4383 6841 2.570302 ACGTACAAATACCCTTGAGCCT 59.430 45.455 0.00 0.00 0.00 4.58
4384 6842 2.981898 ACGTACAAATACCCTTGAGCC 58.018 47.619 0.00 0.00 0.00 4.70
4385 6843 6.510536 AGTATACGTACAAATACCCTTGAGC 58.489 40.000 0.00 0.00 33.09 4.26
4386 6844 9.674824 CTAAGTATACGTACAAATACCCTTGAG 57.325 37.037 0.00 0.00 33.09 3.02
4387 6845 9.407380 TCTAAGTATACGTACAAATACCCTTGA 57.593 33.333 0.00 0.00 33.09 3.02
4390 6848 9.413734 AGTTCTAAGTATACGTACAAATACCCT 57.586 33.333 0.00 0.00 33.09 4.34
4395 6853 9.578439 GTCCAAGTTCTAAGTATACGTACAAAT 57.422 33.333 0.00 0.00 33.09 2.32
4396 6854 8.796475 AGTCCAAGTTCTAAGTATACGTACAAA 58.204 33.333 0.00 0.00 33.09 2.83
4397 6855 8.340618 AGTCCAAGTTCTAAGTATACGTACAA 57.659 34.615 0.00 0.00 33.09 2.41
4398 6856 7.928307 AGTCCAAGTTCTAAGTATACGTACA 57.072 36.000 0.00 0.00 33.09 2.90
4399 6857 9.103861 AGTAGTCCAAGTTCTAAGTATACGTAC 57.896 37.037 0.00 0.00 0.00 3.67
4401 6859 9.844257 ATAGTAGTCCAAGTTCTAAGTATACGT 57.156 33.333 0.00 0.00 0.00 3.57
4431 6889 9.849166 TCGTCAAAAAGAAAACTTCAACTAAAT 57.151 25.926 0.00 0.00 0.00 1.40
4432 6890 9.849166 ATCGTCAAAAAGAAAACTTCAACTAAA 57.151 25.926 0.00 0.00 0.00 1.85
4433 6891 9.284594 CATCGTCAAAAAGAAAACTTCAACTAA 57.715 29.630 0.00 0.00 0.00 2.24
4434 6892 7.431084 GCATCGTCAAAAAGAAAACTTCAACTA 59.569 33.333 0.00 0.00 0.00 2.24
4435 6893 6.253512 GCATCGTCAAAAAGAAAACTTCAACT 59.746 34.615 0.00 0.00 0.00 3.16
4436 6894 6.402816 GCATCGTCAAAAAGAAAACTTCAAC 58.597 36.000 0.00 0.00 0.00 3.18
4468 6926 1.621317 TCGTGCAGTAGTTCAATCCCA 59.379 47.619 0.00 0.00 0.00 4.37
4485 6943 1.504359 TTCGTTTCAAGCCGATTCGT 58.496 45.000 5.20 0.00 32.44 3.85
4492 6950 1.154035 CGCCCATTCGTTTCAAGCC 60.154 57.895 0.00 0.00 0.00 4.35
4549 7019 6.487103 GTTCGAAAAGACTTGTGAATGAACT 58.513 36.000 0.00 0.00 31.74 3.01
4620 7091 1.305046 ATGAGGGAGGAACGGTCGT 60.305 57.895 0.00 0.00 0.00 4.34
4686 7157 2.342648 GCCCGTCGGAAACTCAGT 59.657 61.111 14.39 0.00 0.00 3.41
4753 7224 4.043200 GCACAAAGCAGCCGGTCC 62.043 66.667 1.90 0.00 44.79 4.46
4784 7255 1.738099 AGCTAGCAAACGTGGCGAG 60.738 57.895 18.83 15.22 37.11 5.03
4862 7375 0.782384 CGACAAACTAGCGGTGACAC 59.218 55.000 0.00 0.00 0.00 3.67
4865 7378 1.373748 GCCGACAAACTAGCGGTGA 60.374 57.895 0.00 0.00 46.38 4.02
4866 7379 1.019278 ATGCCGACAAACTAGCGGTG 61.019 55.000 0.00 0.00 46.38 4.94
4924 7437 6.179756 TGATGTATGTGTCAAACCATTAGCT 58.820 36.000 0.00 0.00 0.00 3.32
5092 7605 2.108250 ACTAGTTGATGTGTTGGGCCTT 59.892 45.455 4.53 0.00 0.00 4.35
5112 7625 0.940126 CATTGGCTGGATGTAGCGAC 59.060 55.000 0.00 0.00 44.60 5.19
5192 7710 5.634859 CACAAAATACGGTAAGACGGTAAGT 59.365 40.000 0.00 0.00 37.43 2.24
5193 7711 5.863397 TCACAAAATACGGTAAGACGGTAAG 59.137 40.000 0.00 0.00 37.43 2.34
5194 7712 5.777802 TCACAAAATACGGTAAGACGGTAA 58.222 37.500 0.00 0.00 37.43 2.85
5195 7713 5.384063 TCACAAAATACGGTAAGACGGTA 57.616 39.130 0.00 0.29 38.09 4.02
5196 7714 4.255833 TCACAAAATACGGTAAGACGGT 57.744 40.909 0.00 0.00 38.39 4.83
5197 7715 4.033587 CCATCACAAAATACGGTAAGACGG 59.966 45.833 0.00 0.00 38.39 4.79
5200 7718 3.942748 GCCCATCACAAAATACGGTAAGA 59.057 43.478 0.00 0.00 0.00 2.10
5219 7737 4.820173 ACTTGTGTTTAGTTTAGTCAGCCC 59.180 41.667 0.00 0.00 0.00 5.19
5298 7819 1.899142 TCAAGGACGACACATGGATCA 59.101 47.619 0.00 0.00 0.00 2.92
5334 7855 6.707440 TCATAGTGGAGATGAACTTCTCTC 57.293 41.667 14.28 8.59 41.58 3.20
5339 7860 4.723789 ACCCATCATAGTGGAGATGAACTT 59.276 41.667 4.12 0.00 43.28 2.66
5341 7862 4.696479 ACCCATCATAGTGGAGATGAAC 57.304 45.455 4.12 0.00 43.28 3.18
5343 7864 3.834813 GCTACCCATCATAGTGGAGATGA 59.165 47.826 4.12 0.00 43.28 2.92
5378 7900 2.049627 GAGGGGGCTTCATCTCGCAT 62.050 60.000 0.00 0.00 0.00 4.73
5392 7914 1.710816 GATCTGGGTGTAGAGAGGGG 58.289 60.000 0.00 0.00 0.00 4.79
5462 7984 0.904649 CACATAGTGTGGGAGGAGCA 59.095 55.000 2.22 0.00 44.27 4.26
5463 7985 3.768633 CACATAGTGTGGGAGGAGC 57.231 57.895 2.22 0.00 44.27 4.70
5478 8000 2.485795 GGCCGACTTGTTTGCCACA 61.486 57.895 8.84 0.00 43.46 4.17
5625 8147 7.437565 TCTGAATTTGAAAATTTTCACGCATCA 59.562 29.630 28.78 25.20 45.99 3.07
5626 8148 7.786114 TCTGAATTTGAAAATTTTCACGCATC 58.214 30.769 28.78 22.84 45.99 3.91
5686 8208 8.423349 TCTCATGAATGTTTGAAAAGGTTCATT 58.577 29.630 0.00 2.03 43.29 2.57
5833 8376 9.599866 AGAAAAGATTCCGACTTCAAAAATTTT 57.400 25.926 0.00 0.00 36.12 1.82
5943 8506 8.871686 AACTAGTCATGAAAATGGAAAACAAC 57.128 30.769 0.00 0.00 0.00 3.32
5964 8527 7.610580 AAAGGGTTCATGGATTTGAAAACTA 57.389 32.000 0.00 0.00 37.36 2.24
5966 8529 6.992123 AGAAAAGGGTTCATGGATTTGAAAAC 59.008 34.615 0.00 0.00 37.36 2.43
5985 8548 8.538856 TCAAATGTGTTTGCGAATTTAGAAAAG 58.461 29.630 0.00 0.00 43.47 2.27
5990 8553 8.702438 AGATTTCAAATGTGTTTGCGAATTTAG 58.298 29.630 0.00 0.00 43.47 1.85
6041 8606 8.810041 AGAAGAGCATTCACTAATTTGGAAAAT 58.190 29.630 4.71 0.00 0.00 1.82
6046 8611 6.748333 TGAGAAGAGCATTCACTAATTTGG 57.252 37.500 4.71 0.00 0.00 3.28
6053 8618 7.506971 TCATGAATATGAGAAGAGCATTCACT 58.493 34.615 0.00 0.00 38.37 3.41
6054 8619 7.725818 TCATGAATATGAGAAGAGCATTCAC 57.274 36.000 0.00 0.00 38.37 3.18
6060 8625 9.798994 AAAAATGTTCATGAATATGAGAAGAGC 57.201 29.630 17.26 0.00 43.76 4.09
6126 8692 5.726980 TTGAGGAAAGTTCATGGATTTGG 57.273 39.130 0.00 0.00 0.00 3.28
6137 8703 9.617523 AAAATGTTCATGAATTTGAGGAAAGTT 57.382 25.926 12.12 0.00 0.00 2.66
6197 8779 3.064271 TCACGAGTTTGGGAAAAAGTTCG 59.936 43.478 0.00 0.00 34.28 3.95
6207 8789 4.568152 AGAAATTGTTCACGAGTTTGGG 57.432 40.909 0.00 0.00 36.09 4.12
6286 8868 1.913778 TGAGGTACTGTAGCGGTTCA 58.086 50.000 10.98 7.24 41.55 3.18
6287 8869 3.521947 AATGAGGTACTGTAGCGGTTC 57.478 47.619 10.98 4.89 41.55 3.62
6290 8872 3.861131 GCCATAATGAGGTACTGTAGCGG 60.861 52.174 10.98 6.04 41.55 5.52
6302 8884 6.741992 TTTTAGTCACTGTGCCATAATGAG 57.258 37.500 2.12 0.00 0.00 2.90
6303 8885 6.037062 CGATTTTAGTCACTGTGCCATAATGA 59.963 38.462 2.12 0.00 0.00 2.57
6304 8886 6.194463 CGATTTTAGTCACTGTGCCATAATG 58.806 40.000 2.12 0.00 0.00 1.90
6305 8887 5.220854 GCGATTTTAGTCACTGTGCCATAAT 60.221 40.000 2.12 0.00 0.00 1.28
6306 8888 4.094294 GCGATTTTAGTCACTGTGCCATAA 59.906 41.667 2.12 0.00 0.00 1.90
6307 8889 3.621268 GCGATTTTAGTCACTGTGCCATA 59.379 43.478 2.12 0.00 0.00 2.74
6312 8894 5.839262 TTGTAGCGATTTTAGTCACTGTG 57.161 39.130 0.17 0.17 0.00 3.66
6334 8916 5.221461 GGGACTGTGTCGTCTGGAATAATAT 60.221 44.000 0.00 0.00 34.38 1.28
6365 8947 3.181497 CCATTTGCAAAGCACTATAGCGT 60.181 43.478 18.19 0.00 38.71 5.07
6371 8953 0.607620 GCCCCATTTGCAAAGCACTA 59.392 50.000 18.19 0.00 38.71 2.74
6402 9546 5.435686 TTCCTCCTAACACACATAGCATT 57.564 39.130 0.00 0.00 0.00 3.56
6517 9664 5.714806 AGAGTTCCACACCTTTTCTCAAAAA 59.285 36.000 0.00 0.00 33.42 1.94
6547 9694 0.246635 CCTCCATTCGGTTCACGTCT 59.753 55.000 0.00 0.00 44.69 4.18
6549 9696 1.375523 GCCTCCATTCGGTTCACGT 60.376 57.895 0.00 0.00 44.69 4.49
6571 9718 1.539496 GGCATGGTCCTACGCGATTAA 60.539 52.381 15.93 0.00 0.00 1.40
6573 9720 1.227556 GGCATGGTCCTACGCGATT 60.228 57.895 15.93 0.00 0.00 3.34
6598 9745 2.683867 AGTAGTGTAGACTAGCCAAGCG 59.316 50.000 0.00 0.00 35.24 4.68
6619 9766 7.284074 TGAAACTTAAGTGTGATGGGAGTTAA 58.716 34.615 9.34 0.00 0.00 2.01
6622 9769 5.304686 TGAAACTTAAGTGTGATGGGAGT 57.695 39.130 9.34 0.00 0.00 3.85
6652 9799 2.381911 GATGTTGCACCATCAAGGGAT 58.618 47.619 18.40 0.00 43.89 3.85
6678 9825 1.404391 ACACTAATGCTAGGACGTCCG 59.596 52.381 28.26 16.57 42.08 4.79
6700 9848 0.249657 GGAAGATGGTGCTAGAGCCG 60.250 60.000 0.00 0.00 41.18 5.52
6747 9895 9.761504 ATGTCACATCATTGTTTTGTATCAAAA 57.238 25.926 3.93 3.93 32.34 2.44
6807 9955 4.767578 ATGTATGGTTCAGCTGATGACT 57.232 40.909 19.04 5.95 37.77 3.41
6817 9965 9.112725 CATGTCAGAAAAGATATGTATGGTTCA 57.887 33.333 0.00 0.00 33.86 3.18
6837 9985 1.184970 TCGTGCTGGAGACCATGTCA 61.185 55.000 0.00 0.00 34.60 3.58
6970 10118 6.337185 TGAGTTCTAGGTACTCCCATCTAA 57.663 41.667 17.72 1.70 41.02 2.10
6971 10119 5.988865 TGAGTTCTAGGTACTCCCATCTA 57.011 43.478 17.72 2.22 41.02 1.98
6972 10120 4.883021 TGAGTTCTAGGTACTCCCATCT 57.117 45.455 17.72 0.00 41.02 2.90
6973 10121 5.390387 AGATGAGTTCTAGGTACTCCCATC 58.610 45.833 17.72 15.51 41.02 3.51
6974 10122 5.411103 AGATGAGTTCTAGGTACTCCCAT 57.589 43.478 17.72 9.94 41.02 4.00
6975 10123 4.883021 AGATGAGTTCTAGGTACTCCCA 57.117 45.455 17.72 6.62 41.02 4.37
6976 10124 6.657541 CATCTAGATGAGTTCTAGGTACTCCC 59.342 46.154 25.78 12.05 44.99 4.30
6977 10125 7.455058 TCATCTAGATGAGTTCTAGGTACTCC 58.545 42.308 27.93 8.04 44.99 3.85
6991 10139 7.285629 AGACCAAATTACGTCTCATCTAGATGA 59.714 37.037 29.17 29.17 42.99 2.92
6992 10140 7.429633 AGACCAAATTACGTCTCATCTAGATG 58.570 38.462 24.32 24.32 45.40 2.90
6993 10141 7.589958 AGACCAAATTACGTCTCATCTAGAT 57.410 36.000 0.00 0.00 34.15 1.98
7002 10150 4.935808 GGTGAATGAGACCAAATTACGTCT 59.064 41.667 6.98 6.98 42.02 4.18
7003 10151 4.935808 AGGTGAATGAGACCAAATTACGTC 59.064 41.667 0.00 0.00 35.76 4.34
7004 10152 4.906618 AGGTGAATGAGACCAAATTACGT 58.093 39.130 0.00 0.00 35.76 3.57
7005 10153 6.978343 TTAGGTGAATGAGACCAAATTACG 57.022 37.500 0.00 0.00 35.76 3.18
7028 10176 6.521162 GTGGGTTGTATCCATTCTTGTTTTT 58.479 36.000 0.00 0.00 36.58 1.94
7029 10177 5.278758 CGTGGGTTGTATCCATTCTTGTTTT 60.279 40.000 0.00 0.00 36.58 2.43
7030 10178 4.217550 CGTGGGTTGTATCCATTCTTGTTT 59.782 41.667 0.00 0.00 36.58 2.83
7031 10179 3.756434 CGTGGGTTGTATCCATTCTTGTT 59.244 43.478 0.00 0.00 36.58 2.83
7032 10180 3.244770 ACGTGGGTTGTATCCATTCTTGT 60.245 43.478 0.00 0.00 36.58 3.16
7033 10181 3.343617 ACGTGGGTTGTATCCATTCTTG 58.656 45.455 0.00 0.00 36.58 3.02
7034 10182 3.008594 TGACGTGGGTTGTATCCATTCTT 59.991 43.478 0.00 0.00 36.58 2.52
7035 10183 2.569853 TGACGTGGGTTGTATCCATTCT 59.430 45.455 0.00 0.00 36.58 2.40
7036 10184 2.936498 CTGACGTGGGTTGTATCCATTC 59.064 50.000 0.00 0.00 36.58 2.67
7037 10185 2.939640 GCTGACGTGGGTTGTATCCATT 60.940 50.000 0.00 0.00 36.58 3.16
7038 10186 1.406887 GCTGACGTGGGTTGTATCCAT 60.407 52.381 0.00 0.00 36.58 3.41
7039 10187 0.036765 GCTGACGTGGGTTGTATCCA 60.037 55.000 0.00 0.00 0.00 3.41
7040 10188 0.036765 TGCTGACGTGGGTTGTATCC 60.037 55.000 0.00 0.00 0.00 2.59
7041 10189 1.076332 GTGCTGACGTGGGTTGTATC 58.924 55.000 0.00 0.00 0.00 2.24
7042 10190 0.394938 TGTGCTGACGTGGGTTGTAT 59.605 50.000 0.00 0.00 0.00 2.29
7043 10191 0.531090 GTGTGCTGACGTGGGTTGTA 60.531 55.000 0.00 0.00 0.00 2.41
7044 10192 1.817941 GTGTGCTGACGTGGGTTGT 60.818 57.895 0.00 0.00 0.00 3.32
7045 10193 1.817520 TGTGTGCTGACGTGGGTTG 60.818 57.895 0.00 0.00 0.00 3.77
7046 10194 1.817941 GTGTGTGCTGACGTGGGTT 60.818 57.895 0.00 0.00 0.00 4.11
7047 10195 2.203015 GTGTGTGCTGACGTGGGT 60.203 61.111 0.00 0.00 0.00 4.51
7048 10196 3.337889 CGTGTGTGCTGACGTGGG 61.338 66.667 0.00 0.00 0.00 4.61
7049 10197 4.000557 GCGTGTGTGCTGACGTGG 62.001 66.667 0.00 0.00 37.89 4.94
7050 10198 2.484631 GATGCGTGTGTGCTGACGTG 62.485 60.000 0.00 0.00 37.89 4.49
7051 10199 2.280119 ATGCGTGTGTGCTGACGT 60.280 55.556 0.00 0.00 37.89 4.34
7052 10200 1.560004 AAGATGCGTGTGTGCTGACG 61.560 55.000 0.00 0.00 38.63 4.35
7053 10201 1.428448 TAAGATGCGTGTGTGCTGAC 58.572 50.000 0.00 0.00 35.36 3.51
7054 10202 2.385013 ATAAGATGCGTGTGTGCTGA 57.615 45.000 0.00 0.00 35.36 4.26
7055 10203 2.033407 GCTATAAGATGCGTGTGTGCTG 60.033 50.000 0.00 0.00 35.36 4.41
7056 10204 2.205074 GCTATAAGATGCGTGTGTGCT 58.795 47.619 0.00 0.00 35.36 4.40
7057 10205 1.933181 TGCTATAAGATGCGTGTGTGC 59.067 47.619 0.00 0.00 0.00 4.57
7058 10206 3.803778 TGATGCTATAAGATGCGTGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
7059 10207 3.804325 GTGATGCTATAAGATGCGTGTGT 59.196 43.478 0.00 0.00 0.00 3.72
7060 10208 3.803778 TGTGATGCTATAAGATGCGTGTG 59.196 43.478 0.00 0.00 0.00 3.82
7061 10209 4.058721 TGTGATGCTATAAGATGCGTGT 57.941 40.909 0.00 0.00 0.00 4.49
7062 10210 4.092529 GGATGTGATGCTATAAGATGCGTG 59.907 45.833 0.00 0.00 0.00 5.34
7063 10211 4.248859 GGATGTGATGCTATAAGATGCGT 58.751 43.478 0.00 0.00 0.00 5.24
7064 10212 4.248058 TGGATGTGATGCTATAAGATGCG 58.752 43.478 0.00 0.00 0.00 4.73
7065 10213 6.754702 ATTGGATGTGATGCTATAAGATGC 57.245 37.500 0.00 0.00 0.00 3.91
7066 10214 7.769507 AGCTATTGGATGTGATGCTATAAGATG 59.230 37.037 0.00 0.00 0.00 2.90
7067 10215 7.859540 AGCTATTGGATGTGATGCTATAAGAT 58.140 34.615 0.00 0.00 0.00 2.40
7068 10216 7.250032 AGCTATTGGATGTGATGCTATAAGA 57.750 36.000 0.00 0.00 0.00 2.10
7072 10220 9.964354 TTTTATAGCTATTGGATGTGATGCTAT 57.036 29.630 12.39 0.00 42.49 2.97
7073 10221 9.964354 ATTTTATAGCTATTGGATGTGATGCTA 57.036 29.630 12.39 0.00 36.26 3.49
7074 10222 8.874744 ATTTTATAGCTATTGGATGTGATGCT 57.125 30.769 12.39 0.00 0.00 3.79
7127 10275 9.944376 AATAACAGTTTTGCTAGAACTCATCTA 57.056 29.630 0.00 0.00 39.71 1.98
7128 10276 8.854614 AATAACAGTTTTGCTAGAACTCATCT 57.145 30.769 0.00 0.00 42.48 2.90
7130 10278 9.944376 TCTAATAACAGTTTTGCTAGAACTCAT 57.056 29.630 0.00 0.00 35.26 2.90
7131 10279 9.944376 ATCTAATAACAGTTTTGCTAGAACTCA 57.056 29.630 0.00 0.00 35.26 3.41
7133 10281 8.669243 GCATCTAATAACAGTTTTGCTAGAACT 58.331 33.333 0.00 0.00 37.82 3.01
7134 10282 8.669243 AGCATCTAATAACAGTTTTGCTAGAAC 58.331 33.333 0.00 0.00 0.00 3.01
7135 10283 8.668353 CAGCATCTAATAACAGTTTTGCTAGAA 58.332 33.333 0.00 0.00 0.00 2.10
7136 10284 7.201644 GCAGCATCTAATAACAGTTTTGCTAGA 60.202 37.037 0.00 0.00 0.00 2.43
7137 10285 6.909357 GCAGCATCTAATAACAGTTTTGCTAG 59.091 38.462 0.00 0.00 0.00 3.42
7138 10286 6.599244 AGCAGCATCTAATAACAGTTTTGCTA 59.401 34.615 0.00 0.00 35.47 3.49
7139 10287 5.416952 AGCAGCATCTAATAACAGTTTTGCT 59.583 36.000 0.00 0.00 32.68 3.91
7140 10288 5.514204 CAGCAGCATCTAATAACAGTTTTGC 59.486 40.000 0.00 0.00 0.00 3.68
7141 10289 6.525628 CACAGCAGCATCTAATAACAGTTTTG 59.474 38.462 0.00 0.00 0.00 2.44
7142 10290 6.207417 ACACAGCAGCATCTAATAACAGTTTT 59.793 34.615 0.00 0.00 0.00 2.43
7143 10291 5.707298 ACACAGCAGCATCTAATAACAGTTT 59.293 36.000 0.00 0.00 0.00 2.66
7144 10292 5.248640 ACACAGCAGCATCTAATAACAGTT 58.751 37.500 0.00 0.00 0.00 3.16
7145 10293 4.836825 ACACAGCAGCATCTAATAACAGT 58.163 39.130 0.00 0.00 0.00 3.55
7146 10294 5.566623 CAACACAGCAGCATCTAATAACAG 58.433 41.667 0.00 0.00 0.00 3.16
7147 10295 4.142622 GCAACACAGCAGCATCTAATAACA 60.143 41.667 0.00 0.00 0.00 2.41
7148 10296 4.346129 GCAACACAGCAGCATCTAATAAC 58.654 43.478 0.00 0.00 0.00 1.89
7149 10297 3.063861 CGCAACACAGCAGCATCTAATAA 59.936 43.478 0.00 0.00 0.00 1.40
7150 10298 2.609002 CGCAACACAGCAGCATCTAATA 59.391 45.455 0.00 0.00 0.00 0.98
7151 10299 1.399440 CGCAACACAGCAGCATCTAAT 59.601 47.619 0.00 0.00 0.00 1.73
7159 10307 2.111756 GAAAACTTCGCAACACAGCAG 58.888 47.619 0.00 0.00 0.00 4.24
7162 10310 2.629022 CGAGAAAACTTCGCAACACAG 58.371 47.619 0.00 0.00 34.02 3.66
7197 10345 9.538508 CATTCATCTGTTAGTCTCACATGATAA 57.461 33.333 0.00 0.00 0.00 1.75
7200 10348 5.814188 GCATTCATCTGTTAGTCTCACATGA 59.186 40.000 0.00 0.00 0.00 3.07
7238 10547 5.119694 GGATCATCTCCTGTTCCAAAGTAC 58.880 45.833 0.00 0.00 41.58 2.73
7256 10565 1.064463 GCCTTCACATCCTTGGGATCA 60.064 52.381 0.00 0.00 40.98 2.92
7268 10577 0.538057 CCTTGAGCCTTGCCTTCACA 60.538 55.000 0.00 0.00 0.00 3.58
7277 10586 2.116125 GCCCACACCTTGAGCCTT 59.884 61.111 0.00 0.00 0.00 4.35
7350 10659 8.956426 TGGTTTTGGAACTGATCATAAACTATC 58.044 33.333 0.00 0.00 35.18 2.08
7354 10663 7.169140 GTGTTGGTTTTGGAACTGATCATAAAC 59.831 37.037 0.00 1.27 36.03 2.01
7496 10807 3.059597 CGCCAGTGCTATTAACATAGTGC 60.060 47.826 0.00 0.00 35.61 4.40
7497 10808 3.059597 GCGCCAGTGCTATTAACATAGTG 60.060 47.826 0.00 0.00 35.61 2.74
7498 10809 3.131396 GCGCCAGTGCTATTAACATAGT 58.869 45.455 0.00 0.00 35.61 2.12
7499 10810 3.185188 CAGCGCCAGTGCTATTAACATAG 59.815 47.826 2.29 0.00 45.23 2.23
7500 10811 3.130633 CAGCGCCAGTGCTATTAACATA 58.869 45.455 2.29 0.00 45.23 2.29
7501 10812 1.942657 CAGCGCCAGTGCTATTAACAT 59.057 47.619 2.29 0.00 45.23 2.71
7515 10827 2.408368 GCATGTTTTTCTTTACAGCGCC 59.592 45.455 2.29 0.00 0.00 6.53
7557 10875 3.079578 GGAAAGCTAGTACCCACAAACC 58.920 50.000 0.00 0.00 0.00 3.27
7561 10879 4.717279 AAAAGGAAAGCTAGTACCCACA 57.283 40.909 0.00 0.00 0.00 4.17
7582 10900 4.396790 GGGTGACTTGTGTGAACTGTAAAA 59.603 41.667 0.00 0.00 0.00 1.52
7593 10911 1.152963 GCCACTGGGTGACTTGTGT 60.153 57.895 0.00 0.00 35.23 3.72
7596 10914 2.253758 CGTGCCACTGGGTGACTTG 61.254 63.158 0.00 0.00 35.23 3.16
7597 10915 2.111043 CGTGCCACTGGGTGACTT 59.889 61.111 0.00 0.00 35.23 3.01
7598 10916 3.161450 ACGTGCCACTGGGTGACT 61.161 61.111 0.00 0.00 35.23 3.41
7600 10918 3.475494 ACACGTGCCACTGGGTGA 61.475 61.111 17.22 0.00 35.23 4.02
7607 10925 0.884704 AGAATGACCACACGTGCCAC 60.885 55.000 17.22 5.59 0.00 5.01
7625 10943 6.884295 TGGCCGGGATAAATTTAATGATCTAG 59.116 38.462 2.18 0.00 0.00 2.43
7632 10950 2.556622 CGCTGGCCGGGATAAATTTAAT 59.443 45.455 15.02 0.00 0.00 1.40
7644 10962 1.064621 CATTCAAATCGCTGGCCGG 59.935 57.895 7.41 7.41 37.59 6.13
7645 10963 0.523968 CACATTCAAATCGCTGGCCG 60.524 55.000 0.00 0.00 38.61 6.13
7724 11042 7.160547 TCATAAGTACGACACCTGAATAACA 57.839 36.000 0.00 0.00 0.00 2.41
7734 11052 7.917597 TGTCTCTTCTATCATAAGTACGACAC 58.082 38.462 0.00 0.00 30.15 3.67
7737 11055 7.506971 TCCTGTCTCTTCTATCATAAGTACGA 58.493 38.462 0.00 0.00 0.00 3.43
7751 11069 3.823873 TCTGTCACTCTTCCTGTCTCTTC 59.176 47.826 0.00 0.00 0.00 2.87
7755 11073 5.534654 GCTATATCTGTCACTCTTCCTGTCT 59.465 44.000 0.00 0.00 0.00 3.41
7760 11078 3.821600 TCCGCTATATCTGTCACTCTTCC 59.178 47.826 0.00 0.00 0.00 3.46
7767 11093 7.703058 TGAATCTATTCCGCTATATCTGTCA 57.297 36.000 0.41 0.00 35.97 3.58
7769 11095 9.190317 TGTATGAATCTATTCCGCTATATCTGT 57.810 33.333 0.41 0.00 35.97 3.41
7850 11176 7.964559 CCAACATGTTTCACTCAACATACATAG 59.035 37.037 8.77 0.00 44.08 2.23
7865 11191 9.406828 GTAGAATTAAAACCTCCAACATGTTTC 57.593 33.333 8.77 0.00 31.37 2.78
7869 11195 7.362920 CCAGGTAGAATTAAAACCTCCAACATG 60.363 40.741 3.45 0.00 41.75 3.21
7933 11259 6.910259 AGGAGTAAAGATTGGGACCTAAAT 57.090 37.500 0.00 0.00 0.00 1.40
7955 11531 6.093404 TCAGCACGAACTGTCTCTTTTATAG 58.907 40.000 8.82 0.00 38.84 1.31
7959 11535 3.179443 TCAGCACGAACTGTCTCTTTT 57.821 42.857 8.82 0.00 38.84 2.27
8017 11897 7.929245 TGAAGTACAAAGTACATGTTGCTTCTA 59.071 33.333 26.10 18.63 39.53 2.10
8019 11899 6.954944 TGAAGTACAAAGTACATGTTGCTTC 58.045 36.000 23.26 23.26 39.41 3.86
8035 11915 7.667635 TGTTGTATTGATTTGGGATGAAGTACA 59.332 33.333 0.00 0.00 0.00 2.90
8045 11925 4.880759 TGCTTGTGTTGTATTGATTTGGG 58.119 39.130 0.00 0.00 0.00 4.12
8068 11948 5.424252 TCCAATGAGATAAAACCCTACGTCT 59.576 40.000 0.00 0.00 0.00 4.18
8089 11969 1.609501 CCCAGGTTCGGACTCTCCA 60.610 63.158 0.00 0.00 35.91 3.86
8090 11970 0.324091 TACCCAGGTTCGGACTCTCC 60.324 60.000 0.00 0.00 0.00 3.71
8091 11971 1.553706 TTACCCAGGTTCGGACTCTC 58.446 55.000 0.00 0.00 0.00 3.20
8133 12089 3.186817 CCCGAACTAGTAGTCTAGATGCG 59.813 52.174 2.58 8.43 44.52 4.73
8157 12113 0.468214 TGCAGATCTCGGGTAGGGAG 60.468 60.000 0.00 0.00 29.41 4.30
8158 12114 0.188587 ATGCAGATCTCGGGTAGGGA 59.811 55.000 0.00 0.00 0.00 4.20
8161 12117 3.674528 ATTGATGCAGATCTCGGGTAG 57.325 47.619 0.00 0.00 0.00 3.18
8194 12150 3.146847 GTGTTTCTACCCTTCAACCCAG 58.853 50.000 0.00 0.00 0.00 4.45
8263 12219 7.222000 TCGCTATTAAGGTTCCAAAACAAAT 57.778 32.000 0.00 0.00 37.10 2.32
8264 12220 6.636562 TCGCTATTAAGGTTCCAAAACAAA 57.363 33.333 0.00 0.00 37.10 2.83
8265 12221 5.335348 GCTCGCTATTAAGGTTCCAAAACAA 60.335 40.000 0.00 0.00 37.10 2.83
8266 12222 4.155280 GCTCGCTATTAAGGTTCCAAAACA 59.845 41.667 0.00 0.00 37.10 2.83
8269 12225 4.216411 AGCTCGCTATTAAGGTTCCAAA 57.784 40.909 0.00 0.00 0.00 3.28
8272 12228 2.288186 GCAAGCTCGCTATTAAGGTTCC 59.712 50.000 0.00 0.00 31.20 3.62
8280 12236 4.058817 GGTATAACTGCAAGCTCGCTATT 58.941 43.478 0.00 0.00 37.60 1.73
8295 12251 5.246203 TGGCTATGATCCTGTGAGGTATAAC 59.754 44.000 0.00 0.00 36.53 1.89
8348 12372 9.685828 GGTTTGCAAGTTTATAGAAACATGTTA 57.314 29.630 12.39 0.00 46.30 2.41
8540 12566 6.868864 AGTGTGTATGTTCACTCATTGTAGTC 59.131 38.462 0.00 0.00 40.28 2.59
8619 12660 3.134985 GGAAGACTAGTCCCTCAATTCCC 59.865 52.174 20.81 9.17 30.90 3.97
8625 12666 3.245984 TGGAATGGAAGACTAGTCCCTCA 60.246 47.826 19.38 14.33 40.21 3.86
8638 12679 3.655777 GGGACCAGGTATATGGAATGGAA 59.344 47.826 0.00 0.00 43.57 3.53
8645 12686 5.060427 TCAAATTGGGACCAGGTATATGG 57.940 43.478 0.00 0.00 46.47 2.74
8675 12716 9.042008 ACTAAACAACAACAGTACAAGAGTATG 57.958 33.333 0.00 0.00 31.84 2.39
8682 12723 8.951787 ACTATGACTAAACAACAACAGTACAA 57.048 30.769 0.00 0.00 0.00 2.41
8683 12724 9.687210 CTACTATGACTAAACAACAACAGTACA 57.313 33.333 0.00 0.00 0.00 2.90
8705 12746 5.186198 GGAATAAACATGTGCACTCCTACT 58.814 41.667 19.41 0.88 0.00 2.57
8716 12757 5.911752 TGCACTGTTTTGGAATAAACATGT 58.088 33.333 0.00 0.00 44.44 3.21
8749 12791 6.018507 GCTCTTGTTTTCATGCAAGTTCAAAT 60.019 34.615 9.66 0.00 41.83 2.32
8769 12811 6.889301 TGTCATCAAGATTGAAAAGCTCTT 57.111 33.333 0.00 0.00 38.98 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.