Multiple sequence alignment - TraesCS3A01G165900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G165900 chr3A 100.000 2848 0 0 1 2848 170810477 170813324 0.000000e+00 5260.0
1 TraesCS3A01G165900 chr3A 80.164 610 108 10 1222 1826 559334346 559334947 7.240000e-121 444.0
2 TraesCS3A01G165900 chr3A 78.880 625 114 12 1214 1829 170658857 170659472 9.500000e-110 407.0
3 TraesCS3A01G165900 chr3A 87.153 288 32 5 2500 2786 111084893 111084610 3.540000e-84 322.0
4 TraesCS3A01G165900 chr3A 84.691 307 31 8 2558 2848 626674077 626673771 2.780000e-75 292.0
5 TraesCS3A01G165900 chr3A 85.915 71 6 3 2721 2787 606745273 606745343 3.940000e-09 73.1
6 TraesCS3A01G165900 chr3D 94.706 1889 58 18 420 2297 157444159 157442302 0.000000e+00 2896.0
7 TraesCS3A01G165900 chr3D 79.305 633 124 5 1214 1844 427294807 427294180 1.210000e-118 436.0
8 TraesCS3A01G165900 chr3D 80.522 575 103 7 1273 1844 427289042 427288474 1.570000e-117 433.0
9 TraesCS3A01G165900 chr3D 79.479 614 108 12 1225 1829 157540561 157539957 1.220000e-113 420.0
10 TraesCS3A01G165900 chr3D 81.744 367 39 15 2498 2848 312704948 312705302 6.010000e-72 281.0
11 TraesCS3A01G165900 chr3D 88.542 192 18 3 13 203 157444906 157444718 2.210000e-56 230.0
12 TraesCS3A01G165900 chr3D 94.340 53 3 0 1066 1118 451709915 451709967 6.540000e-12 82.4
13 TraesCS3A01G165900 chr3D 94.231 52 3 0 1066 1117 451885414 451885465 2.350000e-11 80.5
14 TraesCS3A01G165900 chr3B 90.561 1960 98 42 397 2306 228691638 228689716 0.000000e+00 2514.0
15 TraesCS3A01G165900 chr3B 87.075 294 34 3 2498 2787 646718031 646717738 2.120000e-86 329.0
16 TraesCS3A01G165900 chr3B 87.629 194 20 2 13 205 228694297 228694107 3.690000e-54 222.0
17 TraesCS3A01G165900 chr4A 80.892 628 110 9 1214 1838 621009747 621009127 1.190000e-133 486.0
18 TraesCS3A01G165900 chr5B 80.161 620 114 8 1214 1830 700997584 700998197 3.340000e-124 455.0
19 TraesCS3A01G165900 chr5B 82.740 365 38 14 2501 2848 519187282 519186926 4.610000e-78 302.0
20 TraesCS3A01G165900 chr1A 84.419 353 52 3 2498 2848 141429631 141429280 7.550000e-91 344.0
21 TraesCS3A01G165900 chr5D 87.762 286 31 4 2498 2780 8970393 8970677 5.880000e-87 331.0
22 TraesCS3A01G165900 chr5A 85.714 287 36 4 2504 2786 597422282 597422567 5.970000e-77 298.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G165900 chr3A 170810477 170813324 2847 False 5260 5260 100.000 1 2848 1 chr3A.!!$F2 2847
1 TraesCS3A01G165900 chr3A 559334346 559334947 601 False 444 444 80.164 1222 1826 1 chr3A.!!$F3 604
2 TraesCS3A01G165900 chr3A 170658857 170659472 615 False 407 407 78.880 1214 1829 1 chr3A.!!$F1 615
3 TraesCS3A01G165900 chr3D 157442302 157444906 2604 True 1563 2896 91.624 13 2297 2 chr3D.!!$R4 2284
4 TraesCS3A01G165900 chr3D 427294180 427294807 627 True 436 436 79.305 1214 1844 1 chr3D.!!$R3 630
5 TraesCS3A01G165900 chr3D 427288474 427289042 568 True 433 433 80.522 1273 1844 1 chr3D.!!$R2 571
6 TraesCS3A01G165900 chr3D 157539957 157540561 604 True 420 420 79.479 1225 1829 1 chr3D.!!$R1 604
7 TraesCS3A01G165900 chr3B 228689716 228694297 4581 True 1368 2514 89.095 13 2306 2 chr3B.!!$R2 2293
8 TraesCS3A01G165900 chr4A 621009127 621009747 620 True 486 486 80.892 1214 1838 1 chr4A.!!$R1 624
9 TraesCS3A01G165900 chr5B 700997584 700998197 613 False 455 455 80.161 1214 1830 1 chr5B.!!$F1 616


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
965 3548 0.17576 TCAGTACCATCTTGCTCGGC 59.824 55.0 0.0 0.0 0.0 5.54 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2505 5133 0.041312 CTAGTGCGCTGCGTTTGTTT 60.041 50.0 24.04 6.41 0.0 2.83 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 3.379057 TGCTACTATTGCTACACTACGCA 59.621 43.478 0.00 0.00 0.00 5.24
58 59 2.064434 TGACACACTTTGGCATGGAA 57.936 45.000 0.00 0.00 38.87 3.53
71 72 1.645034 CATGGAAGCTCACCGTGTAG 58.355 55.000 18.35 0.00 38.97 2.74
74 75 1.014564 GGAAGCTCACCGTGTAGCAC 61.015 60.000 18.88 13.78 41.32 4.40
89 90 0.875059 AGCACGCTTTGACTTTAGGC 59.125 50.000 0.00 0.00 0.00 3.93
104 106 3.309961 TTAGGCGCAAATTGCATTGAA 57.690 38.095 18.65 3.72 45.36 2.69
110 112 2.134346 GCAAATTGCATTGAACCGTGT 58.866 42.857 13.73 0.00 44.26 4.49
111 113 3.312828 GCAAATTGCATTGAACCGTGTA 58.687 40.909 13.73 0.00 44.26 2.90
142 144 4.873746 ACGGAGTGGATTGATCGATATT 57.126 40.909 0.00 0.00 42.51 1.28
151 153 9.838339 AGTGGATTGATCGATATTTAGAAAGTT 57.162 29.630 0.00 0.00 0.00 2.66
178 180 7.397761 AGCTAGAGTAAAATACCAGTCTTCTGT 59.602 37.037 0.00 0.00 39.82 3.41
179 181 8.684520 GCTAGAGTAAAATACCAGTCTTCTGTA 58.315 37.037 0.00 0.00 39.82 2.74
187 189 4.035612 ACCAGTCTTCTGTAGCAGTAGA 57.964 45.455 2.12 2.12 39.82 2.59
198 200 6.343703 TCTGTAGCAGTAGACGTAGTAATCA 58.656 40.000 0.00 0.00 34.62 2.57
210 212 5.473039 ACGTAGTAATCAGCCGTAACTTTT 58.527 37.500 0.00 0.00 41.94 2.27
211 213 5.346822 ACGTAGTAATCAGCCGTAACTTTTG 59.653 40.000 0.00 0.00 41.94 2.44
220 242 2.480587 GCCGTAACTTTTGTTGCTGGTT 60.481 45.455 0.00 0.00 43.41 3.67
221 243 3.776340 CCGTAACTTTTGTTGCTGGTTT 58.224 40.909 0.00 0.00 43.41 3.27
222 244 4.177783 CCGTAACTTTTGTTGCTGGTTTT 58.822 39.130 0.00 0.00 43.41 2.43
223 245 4.032331 CCGTAACTTTTGTTGCTGGTTTTG 59.968 41.667 0.00 0.00 43.41 2.44
226 248 5.355467 AACTTTTGTTGCTGGTTTTGTTG 57.645 34.783 0.00 0.00 41.77 3.33
230 252 4.792521 TTGTTGCTGGTTTTGTTGTACT 57.207 36.364 0.00 0.00 0.00 2.73
232 254 6.458232 TTGTTGCTGGTTTTGTTGTACTAT 57.542 33.333 0.00 0.00 0.00 2.12
235 257 7.419204 TGTTGCTGGTTTTGTTGTACTATTAC 58.581 34.615 0.00 0.00 0.00 1.89
237 259 5.990386 TGCTGGTTTTGTTGTACTATTACGA 59.010 36.000 0.00 0.00 0.00 3.43
239 261 6.959311 GCTGGTTTTGTTGTACTATTACGATG 59.041 38.462 0.00 0.00 0.00 3.84
240 262 6.833839 TGGTTTTGTTGTACTATTACGATGC 58.166 36.000 0.00 0.00 0.00 3.91
242 264 6.959311 GGTTTTGTTGTACTATTACGATGCAG 59.041 38.462 0.00 0.00 0.00 4.41
244 266 3.794564 TGTTGTACTATTACGATGCAGCG 59.205 43.478 24.69 24.69 37.29 5.18
250 272 4.893795 ACTATTACGATGCAGCGTTTTTC 58.106 39.130 36.22 2.72 42.71 2.29
251 273 4.630069 ACTATTACGATGCAGCGTTTTTCT 59.370 37.500 36.22 17.12 42.71 2.52
252 274 3.889196 TTACGATGCAGCGTTTTTCTT 57.111 38.095 36.22 11.25 42.71 2.52
254 276 3.183237 ACGATGCAGCGTTTTTCTTAC 57.817 42.857 26.39 0.00 42.71 2.34
255 277 2.806244 ACGATGCAGCGTTTTTCTTACT 59.194 40.909 26.39 0.00 42.71 2.24
257 279 4.630069 ACGATGCAGCGTTTTTCTTACTAT 59.370 37.500 26.39 0.00 42.71 2.12
258 280 5.191059 CGATGCAGCGTTTTTCTTACTATC 58.809 41.667 17.73 0.00 0.00 2.08
264 293 6.466097 GCAGCGTTTTTCTTACTATCAACATC 59.534 38.462 0.00 0.00 0.00 3.06
305 334 8.964420 TCTCATTTTGACGGAAAACAATAATC 57.036 30.769 0.00 0.00 36.35 1.75
321 350 8.546083 AACAATAATCCTCAGAGTATCAGAGT 57.454 34.615 0.00 0.00 46.11 3.24
327 356 6.755542 TCCTCAGAGTATCAGAGTATCAGA 57.244 41.667 0.00 0.00 46.11 3.27
329 358 6.328934 TCCTCAGAGTATCAGAGTATCAGAGT 59.671 42.308 0.00 0.00 46.11 3.24
330 359 7.511028 TCCTCAGAGTATCAGAGTATCAGAGTA 59.489 40.741 0.00 0.00 46.11 2.59
331 360 8.321353 CCTCAGAGTATCAGAGTATCAGAGTAT 58.679 40.741 0.00 0.00 46.11 2.12
332 361 9.725019 CTCAGAGTATCAGAGTATCAGAGTATT 57.275 37.037 0.00 0.00 43.00 1.89
333 362 9.719355 TCAGAGTATCAGAGTATCAGAGTATTC 57.281 37.037 0.00 0.00 32.81 1.75
334 363 8.655970 CAGAGTATCAGAGTATCAGAGTATTCG 58.344 40.741 0.00 0.00 32.81 3.34
353 382 8.450964 AGTATTCGTGATTTTCAACGATCAAAT 58.549 29.630 0.00 0.00 34.34 2.32
358 387 7.634432 TCGTGATTTTCAACGATCAAATATTCG 59.366 33.333 0.00 0.00 41.04 3.34
378 407 2.727777 GAAAAGTGAACTTGGTTCGGC 58.272 47.619 0.00 2.48 44.55 5.54
381 410 1.308998 AGTGAACTTGGTTCGGCTTG 58.691 50.000 6.03 0.00 44.55 4.01
384 413 1.452145 GAACTTGGTTCGGCTTGGCA 61.452 55.000 0.00 0.00 32.81 4.92
385 414 1.455383 AACTTGGTTCGGCTTGGCAG 61.455 55.000 0.00 0.00 0.00 4.85
386 415 1.600636 CTTGGTTCGGCTTGGCAGA 60.601 57.895 0.00 0.00 0.00 4.26
390 419 4.063529 TTCGGCTTGGCAGAACAG 57.936 55.556 1.40 0.00 37.77 3.16
392 421 2.956799 TTCGGCTTGGCAGAACAGCA 62.957 55.000 10.75 0.00 37.77 4.41
393 422 2.647297 GGCTTGGCAGAACAGCAC 59.353 61.111 10.75 0.00 35.83 4.40
394 423 2.253452 GCTTGGCAGAACAGCACG 59.747 61.111 4.08 0.00 35.83 5.34
395 424 2.546494 GCTTGGCAGAACAGCACGT 61.546 57.895 4.08 0.00 35.83 4.49
404 2731 1.044725 GAACAGCACGTCATTTTGCG 58.955 50.000 0.00 0.00 43.87 4.85
415 2967 3.609175 CGTCATTTTGCGGTGATCAAACT 60.609 43.478 0.00 0.00 33.66 2.66
417 2969 4.851558 GTCATTTTGCGGTGATCAAACTAC 59.148 41.667 0.00 0.00 33.66 2.73
418 2970 4.759693 TCATTTTGCGGTGATCAAACTACT 59.240 37.500 0.00 0.00 33.66 2.57
438 2990 2.836944 GAGTAACTCCACCGTTGGC 58.163 57.895 0.00 0.00 43.56 4.52
471 3023 4.096003 GACAGGGCGGGCAAGCTA 62.096 66.667 3.27 0.00 37.29 3.32
472 3024 3.406595 GACAGGGCGGGCAAGCTAT 62.407 63.158 3.27 0.00 37.29 2.97
473 3025 2.040009 GACAGGGCGGGCAAGCTATA 62.040 60.000 3.27 0.00 37.29 1.31
531 3083 0.465705 TCATAAGCAGCCGGGAGAAG 59.534 55.000 2.18 0.00 0.00 2.85
598 3157 2.103601 AGGCAGCACAAAATTTTGCTCT 59.896 40.909 26.94 20.74 46.31 4.09
603 3162 2.733026 GCACAAAATTTTGCTCTGCGAT 59.267 40.909 26.94 5.80 41.79 4.58
616 3175 2.381589 TCTGCGATACATTAGCGTTCG 58.618 47.619 0.00 0.00 40.16 3.95
750 3319 2.095768 GCTCGCTTTCACACTGCAAATA 60.096 45.455 0.00 0.00 0.00 1.40
924 3505 4.516698 ACAACAGTTAAGCCAGAGACATTG 59.483 41.667 0.00 0.00 0.00 2.82
932 3513 0.809385 CCAGAGACATTGCAAGCAGG 59.191 55.000 4.94 0.00 0.00 4.85
947 3528 1.202580 AGCAGGGTACGATCTTGCATC 60.203 52.381 7.30 0.00 0.00 3.91
965 3548 0.175760 TCAGTACCATCTTGCTCGGC 59.824 55.000 0.00 0.00 0.00 5.54
1006 3589 1.493950 GGCGGTCATCAAGATGCTCG 61.494 60.000 15.30 15.30 38.65 5.03
1038 3621 2.358984 TGCGCATTGCTGCTCAGA 60.359 55.556 5.66 3.99 46.65 3.27
1146 3729 1.076533 TCGTCGCTCGGCATCTTTTC 61.077 55.000 0.00 0.00 40.32 2.29
1157 3740 3.073678 GGCATCTTTTCCGCCAAATTTT 58.926 40.909 0.00 0.00 45.52 1.82
1158 3741 3.125146 GGCATCTTTTCCGCCAAATTTTC 59.875 43.478 0.00 0.00 45.52 2.29
1159 3742 3.996363 GCATCTTTTCCGCCAAATTTTCT 59.004 39.130 0.00 0.00 0.00 2.52
1189 3801 0.949397 ATGGCTTATGCTGACATGCG 59.051 50.000 0.00 0.00 37.04 4.73
1205 3817 2.969238 CGCCCATGCACGGATCTC 60.969 66.667 0.00 0.00 37.32 2.75
1206 3818 2.190313 GCCCATGCACGGATCTCA 59.810 61.111 0.00 0.00 37.47 3.27
1207 3819 1.228063 GCCCATGCACGGATCTCAT 60.228 57.895 0.00 0.00 37.47 2.90
1208 3820 1.233285 GCCCATGCACGGATCTCATC 61.233 60.000 0.00 0.00 37.47 2.92
1913 4536 2.538449 CGGTATTCGTGTAATCACCTGC 59.462 50.000 0.00 0.00 41.09 4.85
1914 4537 3.527533 GGTATTCGTGTAATCACCTGCA 58.472 45.455 0.00 0.00 41.09 4.41
1995 4618 3.122948 GCACGAATGATGTTTCTGTACGT 59.877 43.478 0.00 0.00 0.00 3.57
1996 4619 4.325204 GCACGAATGATGTTTCTGTACGTA 59.675 41.667 0.00 0.00 0.00 3.57
2179 4807 5.083533 AGCATACTGTTTTCTCTCTCTGG 57.916 43.478 0.00 0.00 0.00 3.86
2266 4894 5.913137 TTTCCAGTGTGAAAGTTGACATT 57.087 34.783 3.51 0.00 30.97 2.71
2267 4895 4.898829 TCCAGTGTGAAAGTTGACATTG 57.101 40.909 0.25 0.25 33.21 2.82
2311 4939 3.233355 GAGCATCGTCCACAAACCT 57.767 52.632 0.00 0.00 0.00 3.50
2312 4940 0.798776 GAGCATCGTCCACAAACCTG 59.201 55.000 0.00 0.00 0.00 4.00
2313 4941 0.606401 AGCATCGTCCACAAACCTGG 60.606 55.000 0.00 0.00 0.00 4.45
2314 4942 0.889186 GCATCGTCCACAAACCTGGT 60.889 55.000 0.00 0.00 32.50 4.00
2315 4943 1.604604 CATCGTCCACAAACCTGGTT 58.395 50.000 6.18 6.18 32.50 3.67
2316 4944 1.953686 CATCGTCCACAAACCTGGTTT 59.046 47.619 18.84 18.84 36.05 3.27
2317 4945 1.670791 TCGTCCACAAACCTGGTTTC 58.329 50.000 21.49 9.52 33.10 2.78
2318 4946 1.210967 TCGTCCACAAACCTGGTTTCT 59.789 47.619 21.49 8.09 33.10 2.52
2319 4947 2.021457 CGTCCACAAACCTGGTTTCTT 58.979 47.619 21.49 9.27 33.10 2.52
2320 4948 2.032924 CGTCCACAAACCTGGTTTCTTC 59.967 50.000 21.49 9.78 33.10 2.87
2321 4949 3.288092 GTCCACAAACCTGGTTTCTTCT 58.712 45.455 21.49 0.00 33.10 2.85
2322 4950 3.699538 GTCCACAAACCTGGTTTCTTCTT 59.300 43.478 21.49 0.00 33.10 2.52
2323 4951 3.951680 TCCACAAACCTGGTTTCTTCTTC 59.048 43.478 21.49 0.00 33.10 2.87
2324 4952 3.954258 CCACAAACCTGGTTTCTTCTTCT 59.046 43.478 21.49 0.00 33.10 2.85
2325 4953 4.402474 CCACAAACCTGGTTTCTTCTTCTT 59.598 41.667 21.49 0.00 33.10 2.52
2326 4954 5.450550 CCACAAACCTGGTTTCTTCTTCTTC 60.451 44.000 21.49 0.00 33.10 2.87
2327 4955 5.358160 CACAAACCTGGTTTCTTCTTCTTCT 59.642 40.000 21.49 0.00 33.10 2.85
2328 4956 5.952347 ACAAACCTGGTTTCTTCTTCTTCTT 59.048 36.000 21.49 0.00 33.10 2.52
2329 4957 6.095580 ACAAACCTGGTTTCTTCTTCTTCTTC 59.904 38.462 21.49 0.00 33.10 2.87
2330 4958 5.638530 ACCTGGTTTCTTCTTCTTCTTCT 57.361 39.130 0.00 0.00 0.00 2.85
2331 4959 6.007485 ACCTGGTTTCTTCTTCTTCTTCTT 57.993 37.500 0.00 0.00 0.00 2.52
2332 4960 6.058833 ACCTGGTTTCTTCTTCTTCTTCTTC 58.941 40.000 0.00 0.00 0.00 2.87
2333 4961 6.126623 ACCTGGTTTCTTCTTCTTCTTCTTCT 60.127 38.462 0.00 0.00 0.00 2.85
2334 4962 6.770303 CCTGGTTTCTTCTTCTTCTTCTTCTT 59.230 38.462 0.00 0.00 0.00 2.52
2335 4963 7.041440 CCTGGTTTCTTCTTCTTCTTCTTCTTC 60.041 40.741 0.00 0.00 0.00 2.87
2336 4964 7.569240 TGGTTTCTTCTTCTTCTTCTTCTTCT 58.431 34.615 0.00 0.00 0.00 2.85
2337 4965 8.049721 TGGTTTCTTCTTCTTCTTCTTCTTCTT 58.950 33.333 0.00 0.00 0.00 2.52
2338 4966 8.898761 GGTTTCTTCTTCTTCTTCTTCTTCTTT 58.101 33.333 0.00 0.00 0.00 2.52
2360 4988 0.673437 TTTTTGCGGAAAGAGCCTGG 59.327 50.000 1.41 0.00 0.00 4.45
2361 4989 0.467290 TTTTGCGGAAAGAGCCTGGT 60.467 50.000 1.41 0.00 0.00 4.00
2362 4990 0.467290 TTTGCGGAAAGAGCCTGGTT 60.467 50.000 0.00 0.00 0.00 3.67
2363 4991 0.467290 TTGCGGAAAGAGCCTGGTTT 60.467 50.000 0.00 0.00 0.00 3.27
2364 4992 0.889186 TGCGGAAAGAGCCTGGTTTC 60.889 55.000 0.00 0.00 32.79 2.78
2365 4993 0.606673 GCGGAAAGAGCCTGGTTTCT 60.607 55.000 7.83 3.35 33.85 2.52
2366 4994 1.897560 CGGAAAGAGCCTGGTTTCTT 58.102 50.000 9.02 9.02 35.25 2.52
2367 4995 2.230660 CGGAAAGAGCCTGGTTTCTTT 58.769 47.619 20.71 20.71 44.10 2.52
2368 4996 3.408634 CGGAAAGAGCCTGGTTTCTTTA 58.591 45.455 20.65 0.00 42.13 1.85
2369 4997 3.188667 CGGAAAGAGCCTGGTTTCTTTAC 59.811 47.826 20.65 20.14 42.13 2.01
2370 4998 4.399219 GGAAAGAGCCTGGTTTCTTTACT 58.601 43.478 21.15 7.64 42.13 2.24
2371 4999 5.557866 GGAAAGAGCCTGGTTTCTTTACTA 58.442 41.667 21.15 0.00 42.13 1.82
2372 5000 6.002082 GGAAAGAGCCTGGTTTCTTTACTAA 58.998 40.000 21.15 0.00 42.13 2.24
2373 5001 6.072618 GGAAAGAGCCTGGTTTCTTTACTAAC 60.073 42.308 21.15 12.71 42.13 2.34
2374 5002 5.562298 AGAGCCTGGTTTCTTTACTAACA 57.438 39.130 0.00 0.00 0.00 2.41
2375 5003 5.306394 AGAGCCTGGTTTCTTTACTAACAC 58.694 41.667 0.00 0.00 0.00 3.32
2376 5004 4.062991 AGCCTGGTTTCTTTACTAACACG 58.937 43.478 0.00 0.00 0.00 4.49
2377 5005 3.187842 GCCTGGTTTCTTTACTAACACGG 59.812 47.826 0.00 0.00 0.00 4.94
2378 5006 3.749609 CCTGGTTTCTTTACTAACACGGG 59.250 47.826 0.00 0.00 0.00 5.28
2379 5007 4.503643 CCTGGTTTCTTTACTAACACGGGA 60.504 45.833 0.00 0.00 0.00 5.14
2380 5008 5.033589 TGGTTTCTTTACTAACACGGGAA 57.966 39.130 0.00 0.00 0.00 3.97
2381 5009 5.058490 TGGTTTCTTTACTAACACGGGAAG 58.942 41.667 0.00 0.00 0.00 3.46
2382 5010 4.453478 GGTTTCTTTACTAACACGGGAAGG 59.547 45.833 0.00 0.00 0.00 3.46
2383 5011 4.961438 TTCTTTACTAACACGGGAAGGT 57.039 40.909 0.00 0.00 0.00 3.50
2384 5012 4.261578 TCTTTACTAACACGGGAAGGTG 57.738 45.455 0.00 0.00 43.54 4.00
2385 5013 3.896888 TCTTTACTAACACGGGAAGGTGA 59.103 43.478 0.00 0.00 40.38 4.02
2386 5014 4.344679 TCTTTACTAACACGGGAAGGTGAA 59.655 41.667 0.00 0.00 40.38 3.18
2387 5015 4.895668 TTACTAACACGGGAAGGTGAAT 57.104 40.909 0.00 0.00 40.38 2.57
2388 5016 3.053831 ACTAACACGGGAAGGTGAATG 57.946 47.619 0.00 0.00 40.38 2.67
2389 5017 1.737793 CTAACACGGGAAGGTGAATGC 59.262 52.381 0.00 0.00 40.38 3.56
2390 5018 0.893727 AACACGGGAAGGTGAATGCC 60.894 55.000 0.00 0.00 40.38 4.40
2391 5019 2.046285 CACGGGAAGGTGAATGCCC 61.046 63.158 0.00 0.00 40.38 5.36
2392 5020 2.354729 CGGGAAGGTGAATGCCCA 59.645 61.111 0.00 0.00 40.71 5.36
2393 5021 1.076777 CGGGAAGGTGAATGCCCAT 60.077 57.895 0.00 0.00 40.71 4.00
2394 5022 0.684153 CGGGAAGGTGAATGCCCATT 60.684 55.000 0.00 0.00 40.71 3.16
2395 5023 1.409521 CGGGAAGGTGAATGCCCATTA 60.410 52.381 0.00 0.00 40.71 1.90
2396 5024 2.745968 GGGAAGGTGAATGCCCATTAA 58.254 47.619 0.00 0.00 40.39 1.40
2397 5025 2.695147 GGGAAGGTGAATGCCCATTAAG 59.305 50.000 0.00 0.00 40.39 1.85
2398 5026 3.627237 GGGAAGGTGAATGCCCATTAAGA 60.627 47.826 0.00 0.00 40.39 2.10
2399 5027 4.218312 GGAAGGTGAATGCCCATTAAGAT 58.782 43.478 0.00 0.00 0.00 2.40
2400 5028 4.651045 GGAAGGTGAATGCCCATTAAGATT 59.349 41.667 0.00 0.00 0.00 2.40
2401 5029 5.833131 GGAAGGTGAATGCCCATTAAGATTA 59.167 40.000 0.00 0.00 0.00 1.75
2402 5030 6.323739 GGAAGGTGAATGCCCATTAAGATTAA 59.676 38.462 0.00 0.00 0.00 1.40
2403 5031 7.147742 GGAAGGTGAATGCCCATTAAGATTAAA 60.148 37.037 0.00 0.00 0.00 1.52
2404 5032 7.732222 AGGTGAATGCCCATTAAGATTAAAA 57.268 32.000 0.00 0.00 0.00 1.52
2405 5033 8.322905 AGGTGAATGCCCATTAAGATTAAAAT 57.677 30.769 0.00 0.00 0.00 1.82
2406 5034 8.424133 AGGTGAATGCCCATTAAGATTAAAATC 58.576 33.333 0.00 0.00 35.64 2.17
2407 5035 7.657354 GGTGAATGCCCATTAAGATTAAAATCC 59.343 37.037 0.00 0.00 36.04 3.01
2408 5036 7.657354 GTGAATGCCCATTAAGATTAAAATCCC 59.343 37.037 0.00 0.00 36.04 3.85
2409 5037 5.782893 TGCCCATTAAGATTAAAATCCCG 57.217 39.130 0.00 0.00 36.04 5.14
2410 5038 4.586841 TGCCCATTAAGATTAAAATCCCGG 59.413 41.667 0.00 0.00 36.04 5.73
2411 5039 4.560716 GCCCATTAAGATTAAAATCCCGGC 60.561 45.833 0.00 0.00 36.04 6.13
2412 5040 4.021456 CCCATTAAGATTAAAATCCCGGCC 60.021 45.833 0.00 0.00 36.04 6.13
2413 5041 4.021456 CCATTAAGATTAAAATCCCGGCCC 60.021 45.833 0.00 0.00 36.04 5.80
2414 5042 2.838637 AAGATTAAAATCCCGGCCCA 57.161 45.000 0.00 0.00 36.04 5.36
2415 5043 2.067365 AGATTAAAATCCCGGCCCAC 57.933 50.000 0.00 0.00 36.04 4.61
2416 5044 1.286553 AGATTAAAATCCCGGCCCACA 59.713 47.619 0.00 0.00 36.04 4.17
2417 5045 2.104170 GATTAAAATCCCGGCCCACAA 58.896 47.619 0.00 0.00 0.00 3.33
2418 5046 2.239681 TTAAAATCCCGGCCCACAAT 57.760 45.000 0.00 0.00 0.00 2.71
2419 5047 2.239681 TAAAATCCCGGCCCACAATT 57.760 45.000 0.00 0.00 0.00 2.32
2420 5048 0.901827 AAAATCCCGGCCCACAATTC 59.098 50.000 0.00 0.00 0.00 2.17
2421 5049 0.252012 AAATCCCGGCCCACAATTCA 60.252 50.000 0.00 0.00 0.00 2.57
2422 5050 0.684153 AATCCCGGCCCACAATTCAG 60.684 55.000 0.00 0.00 0.00 3.02
2423 5051 2.572333 ATCCCGGCCCACAATTCAGG 62.572 60.000 0.00 0.00 0.00 3.86
2424 5052 3.451894 CCGGCCCACAATTCAGGC 61.452 66.667 0.00 1.94 46.37 4.85
2427 5055 3.190878 GCCCACAATTCAGGCGAG 58.809 61.111 0.00 0.00 36.84 5.03
2428 5056 3.056313 GCCCACAATTCAGGCGAGC 62.056 63.158 0.00 0.00 36.84 5.03
2429 5057 1.377725 CCCACAATTCAGGCGAGCT 60.378 57.895 0.00 0.00 0.00 4.09
2430 5058 0.107703 CCCACAATTCAGGCGAGCTA 60.108 55.000 0.00 0.00 0.00 3.32
2431 5059 1.678728 CCCACAATTCAGGCGAGCTAA 60.679 52.381 0.00 0.00 0.00 3.09
2432 5060 2.083774 CCACAATTCAGGCGAGCTAAA 58.916 47.619 0.00 0.00 0.00 1.85
2433 5061 2.487762 CCACAATTCAGGCGAGCTAAAA 59.512 45.455 0.00 0.00 0.00 1.52
2434 5062 3.492313 CACAATTCAGGCGAGCTAAAAC 58.508 45.455 0.00 0.00 0.00 2.43
2435 5063 2.488153 ACAATTCAGGCGAGCTAAAACC 59.512 45.455 0.00 0.00 0.00 3.27
2436 5064 1.751437 ATTCAGGCGAGCTAAAACCC 58.249 50.000 0.00 0.00 0.00 4.11
2437 5065 0.398696 TTCAGGCGAGCTAAAACCCA 59.601 50.000 0.00 0.00 0.00 4.51
2438 5066 0.321298 TCAGGCGAGCTAAAACCCAC 60.321 55.000 0.00 0.00 0.00 4.61
2439 5067 1.375523 AGGCGAGCTAAAACCCACG 60.376 57.895 0.00 0.00 0.00 4.94
2440 5068 1.375013 GGCGAGCTAAAACCCACGA 60.375 57.895 0.00 0.00 0.00 4.35
2441 5069 1.632948 GGCGAGCTAAAACCCACGAC 61.633 60.000 0.00 0.00 0.00 4.34
2442 5070 1.632948 GCGAGCTAAAACCCACGACC 61.633 60.000 0.00 0.00 0.00 4.79
2443 5071 1.017701 CGAGCTAAAACCCACGACCC 61.018 60.000 0.00 0.00 0.00 4.46
2444 5072 0.323957 GAGCTAAAACCCACGACCCT 59.676 55.000 0.00 0.00 0.00 4.34
2445 5073 1.551883 GAGCTAAAACCCACGACCCTA 59.448 52.381 0.00 0.00 0.00 3.53
2446 5074 1.277273 AGCTAAAACCCACGACCCTAC 59.723 52.381 0.00 0.00 0.00 3.18
2447 5075 2.000429 CTAAAACCCACGACCCTACG 58.000 55.000 0.00 0.00 39.31 3.51
2448 5076 1.545582 CTAAAACCCACGACCCTACGA 59.454 52.381 0.00 0.00 37.03 3.43
2449 5077 0.978907 AAAACCCACGACCCTACGAT 59.021 50.000 0.00 0.00 37.03 3.73
2450 5078 1.851304 AAACCCACGACCCTACGATA 58.149 50.000 0.00 0.00 37.03 2.92
2451 5079 1.851304 AACCCACGACCCTACGATAA 58.149 50.000 0.00 0.00 37.03 1.75
2452 5080 1.851304 ACCCACGACCCTACGATAAA 58.149 50.000 0.00 0.00 37.03 1.40
2453 5081 2.391678 ACCCACGACCCTACGATAAAT 58.608 47.619 0.00 0.00 37.03 1.40
2454 5082 2.363359 ACCCACGACCCTACGATAAATC 59.637 50.000 0.00 0.00 37.03 2.17
2469 5097 6.670990 CGATAAATCGTAGCGACTATTTGT 57.329 37.500 16.32 11.37 44.74 2.83
2470 5098 6.505667 CGATAAATCGTAGCGACTATTTGTG 58.494 40.000 16.32 5.56 44.74 3.33
2471 5099 6.398621 CGATAAATCGTAGCGACTATTTGTGG 60.399 42.308 16.32 9.44 44.74 4.17
2472 5100 9.632076 CGATAAATCGTAGCGACTATTTGTGGC 62.632 44.444 16.32 0.00 45.46 5.01
2488 5116 3.794270 GCATTAAGCGACGCTCCA 58.206 55.556 24.69 13.19 38.25 3.86
2489 5117 1.638467 GCATTAAGCGACGCTCCAG 59.362 57.895 24.69 14.23 38.25 3.86
2490 5118 1.638467 CATTAAGCGACGCTCCAGC 59.362 57.895 24.69 0.00 38.25 4.85
2491 5119 0.807667 CATTAAGCGACGCTCCAGCT 60.808 55.000 24.69 9.70 43.90 4.24
2494 5122 2.433318 AGCGACGCTCCAGCTTTC 60.433 61.111 18.46 0.00 38.13 2.62
2495 5123 3.843240 GCGACGCTCCAGCTTTCG 61.843 66.667 13.73 12.70 43.00 3.46
2496 5124 2.126463 CGACGCTCCAGCTTTCGA 60.126 61.111 11.97 0.00 42.87 3.71
2497 5125 1.517257 CGACGCTCCAGCTTTCGAT 60.517 57.895 11.97 0.00 42.87 3.59
2498 5126 1.475441 CGACGCTCCAGCTTTCGATC 61.475 60.000 11.97 0.00 42.87 3.69
2499 5127 1.475441 GACGCTCCAGCTTTCGATCG 61.475 60.000 9.36 9.36 39.32 3.69
2500 5128 2.864931 CGCTCCAGCTTTCGATCGC 61.865 63.158 11.09 0.00 39.32 4.58
2501 5129 2.864931 GCTCCAGCTTTCGATCGCG 61.865 63.158 11.09 0.00 38.21 5.87
2502 5130 2.864931 CTCCAGCTTTCGATCGCGC 61.865 63.158 11.09 12.61 37.46 6.86
2503 5131 3.188100 CCAGCTTTCGATCGCGCA 61.188 61.111 20.35 0.00 37.46 6.09
2504 5132 2.020559 CAGCTTTCGATCGCGCAC 59.979 61.111 20.35 7.92 37.46 5.34
2505 5133 2.432456 AGCTTTCGATCGCGCACA 60.432 55.556 20.35 0.00 37.46 4.57
2506 5134 2.027073 AGCTTTCGATCGCGCACAA 61.027 52.632 20.35 4.68 37.46 3.33
2507 5135 1.154488 GCTTTCGATCGCGCACAAA 60.154 52.632 11.09 4.48 37.46 2.83
2508 5136 1.388475 GCTTTCGATCGCGCACAAAC 61.388 55.000 11.09 0.00 37.46 2.93
2509 5137 0.110867 CTTTCGATCGCGCACAAACA 60.111 50.000 11.09 0.00 37.46 2.83
2510 5138 0.305009 TTTCGATCGCGCACAAACAA 59.695 45.000 11.09 0.00 37.46 2.83
2511 5139 0.305009 TTCGATCGCGCACAAACAAA 59.695 45.000 11.09 0.00 37.46 2.83
2512 5140 0.383737 TCGATCGCGCACAAACAAAC 60.384 50.000 11.09 0.00 37.46 2.93
2513 5141 1.643351 CGATCGCGCACAAACAAACG 61.643 55.000 8.75 0.00 0.00 3.60
2517 5145 2.912744 CGCACAAACAAACGCAGC 59.087 55.556 0.00 0.00 0.00 5.25
2518 5146 2.904549 CGCACAAACAAACGCAGCG 61.905 57.895 14.82 14.82 37.68 5.18
2519 5147 2.912744 CACAAACAAACGCAGCGC 59.087 55.556 16.61 0.00 0.00 5.92
2520 5148 1.871345 CACAAACAAACGCAGCGCA 60.871 52.632 16.61 0.00 0.00 6.09
2521 5149 1.871789 ACAAACAAACGCAGCGCAC 60.872 52.632 16.61 0.00 0.00 5.34
2522 5150 1.586042 CAAACAAACGCAGCGCACT 60.586 52.632 16.61 0.00 0.00 4.40
2523 5151 0.316607 CAAACAAACGCAGCGCACTA 60.317 50.000 16.61 0.00 0.00 2.74
2524 5152 0.041312 AAACAAACGCAGCGCACTAG 60.041 50.000 16.61 3.11 0.00 2.57
2525 5153 2.202222 CAAACGCAGCGCACTAGC 60.202 61.111 16.61 7.16 37.42 3.42
2526 5154 3.423154 AAACGCAGCGCACTAGCC 61.423 61.111 16.61 0.00 37.52 3.93
2527 5155 4.680237 AACGCAGCGCACTAGCCA 62.680 61.111 16.61 0.00 37.52 4.75
2530 5158 3.494336 GCAGCGCACTAGCCACTG 61.494 66.667 11.47 0.00 41.78 3.66
2531 5159 3.494336 CAGCGCACTAGCCACTGC 61.494 66.667 11.47 0.00 35.48 4.40
2536 5164 3.121030 CACTAGCCACTGCGCCAC 61.121 66.667 4.18 0.00 44.33 5.01
2537 5165 4.742201 ACTAGCCACTGCGCCACG 62.742 66.667 4.18 0.00 44.33 4.94
2548 5176 4.383602 CGCCACGCCAAAGGTTCG 62.384 66.667 0.00 0.00 0.00 3.95
2549 5177 3.284449 GCCACGCCAAAGGTTCGT 61.284 61.111 0.00 0.00 36.84 3.85
2552 5180 4.792087 ACGCCAAAGGTTCGTGAT 57.208 50.000 0.00 0.00 34.92 3.06
2553 5181 3.919163 ACGCCAAAGGTTCGTGATA 57.081 47.368 0.00 0.00 34.92 2.15
2554 5182 1.722011 ACGCCAAAGGTTCGTGATAG 58.278 50.000 0.00 0.00 34.92 2.08
2555 5183 1.001633 ACGCCAAAGGTTCGTGATAGT 59.998 47.619 0.00 0.00 34.92 2.12
2556 5184 1.393539 CGCCAAAGGTTCGTGATAGTG 59.606 52.381 0.00 0.00 0.00 2.74
2557 5185 1.737793 GCCAAAGGTTCGTGATAGTGG 59.262 52.381 0.00 0.00 0.00 4.00
2558 5186 1.737793 CCAAAGGTTCGTGATAGTGGC 59.262 52.381 0.00 0.00 0.00 5.01
2559 5187 2.615493 CCAAAGGTTCGTGATAGTGGCT 60.615 50.000 0.00 0.00 0.00 4.75
2560 5188 3.369052 CCAAAGGTTCGTGATAGTGGCTA 60.369 47.826 0.00 0.00 0.00 3.93
2561 5189 3.802948 AAGGTTCGTGATAGTGGCTAG 57.197 47.619 0.00 0.00 0.00 3.42
2562 5190 2.032620 AGGTTCGTGATAGTGGCTAGG 58.967 52.381 0.00 0.00 0.00 3.02
2563 5191 2.029623 GGTTCGTGATAGTGGCTAGGA 58.970 52.381 0.00 0.00 0.00 2.94
2564 5192 2.223758 GGTTCGTGATAGTGGCTAGGAC 60.224 54.545 0.00 0.00 0.00 3.85
2565 5193 2.426024 GTTCGTGATAGTGGCTAGGACA 59.574 50.000 0.00 0.00 0.00 4.02
2566 5194 2.022195 TCGTGATAGTGGCTAGGACAC 58.978 52.381 0.00 0.00 42.83 3.67
2571 5199 2.577593 GTGGCTAGGACACGACCC 59.422 66.667 0.00 0.00 29.47 4.46
2572 5200 2.118732 TGGCTAGGACACGACCCA 59.881 61.111 0.00 0.00 0.00 4.51
2573 5201 2.280552 TGGCTAGGACACGACCCAC 61.281 63.158 0.00 0.00 0.00 4.61
2574 5202 1.982938 GGCTAGGACACGACCCACT 60.983 63.158 0.00 0.00 0.00 4.00
2575 5203 1.542187 GGCTAGGACACGACCCACTT 61.542 60.000 0.00 0.00 0.00 3.16
2576 5204 0.389948 GCTAGGACACGACCCACTTG 60.390 60.000 0.00 0.00 0.00 3.16
2577 5205 1.254026 CTAGGACACGACCCACTTGA 58.746 55.000 0.00 0.00 0.00 3.02
2578 5206 1.616865 CTAGGACACGACCCACTTGAA 59.383 52.381 0.00 0.00 0.00 2.69
2579 5207 0.393077 AGGACACGACCCACTTGAAG 59.607 55.000 0.00 0.00 0.00 3.02
2580 5208 1.228657 GGACACGACCCACTTGAAGC 61.229 60.000 0.00 0.00 0.00 3.86
2581 5209 0.531974 GACACGACCCACTTGAAGCA 60.532 55.000 0.00 0.00 0.00 3.91
2582 5210 0.814010 ACACGACCCACTTGAAGCAC 60.814 55.000 0.00 0.00 0.00 4.40
2583 5211 0.813610 CACGACCCACTTGAAGCACA 60.814 55.000 0.00 0.00 0.00 4.57
2584 5212 0.107410 ACGACCCACTTGAAGCACAA 60.107 50.000 0.00 0.00 36.97 3.33
2585 5213 0.307760 CGACCCACTTGAAGCACAAC 59.692 55.000 0.00 0.00 34.56 3.32
2586 5214 0.307760 GACCCACTTGAAGCACAACG 59.692 55.000 0.00 0.00 34.56 4.10
2587 5215 1.008538 CCCACTTGAAGCACAACGC 60.009 57.895 0.00 0.00 42.91 4.84
2596 5224 4.916273 GCACAACGCGCCGGTTTT 62.916 61.111 5.73 0.00 0.00 2.43
2597 5225 2.724358 CACAACGCGCCGGTTTTC 60.724 61.111 5.73 0.00 0.00 2.29
2598 5226 2.898343 ACAACGCGCCGGTTTTCT 60.898 55.556 5.73 0.00 0.00 2.52
2599 5227 2.127383 CAACGCGCCGGTTTTCTC 60.127 61.111 5.73 0.00 0.00 2.87
2600 5228 3.351416 AACGCGCCGGTTTTCTCC 61.351 61.111 5.73 0.00 0.00 3.71
2601 5229 3.819877 AACGCGCCGGTTTTCTCCT 62.820 57.895 5.73 0.00 0.00 3.69
2602 5230 3.788766 CGCGCCGGTTTTCTCCTG 61.789 66.667 1.90 0.00 0.00 3.86
2603 5231 2.668550 GCGCCGGTTTTCTCCTGT 60.669 61.111 1.90 0.00 0.00 4.00
2604 5232 2.677979 GCGCCGGTTTTCTCCTGTC 61.678 63.158 1.90 0.00 0.00 3.51
2605 5233 1.004918 CGCCGGTTTTCTCCTGTCT 60.005 57.895 1.90 0.00 0.00 3.41
2606 5234 0.602905 CGCCGGTTTTCTCCTGTCTT 60.603 55.000 1.90 0.00 0.00 3.01
2607 5235 1.605753 GCCGGTTTTCTCCTGTCTTT 58.394 50.000 1.90 0.00 0.00 2.52
2608 5236 1.954382 GCCGGTTTTCTCCTGTCTTTT 59.046 47.619 1.90 0.00 0.00 2.27
2609 5237 2.361119 GCCGGTTTTCTCCTGTCTTTTT 59.639 45.455 1.90 0.00 0.00 1.94
2661 5289 9.824534 TTTTCATTTCTTTGCTTTTGTTTCTTC 57.175 25.926 0.00 0.00 0.00 2.87
2662 5290 8.545229 TTCATTTCTTTGCTTTTGTTTCTTCA 57.455 26.923 0.00 0.00 0.00 3.02
2663 5291 8.721019 TCATTTCTTTGCTTTTGTTTCTTCAT 57.279 26.923 0.00 0.00 0.00 2.57
2664 5292 9.165035 TCATTTCTTTGCTTTTGTTTCTTCATT 57.835 25.926 0.00 0.00 0.00 2.57
2665 5293 9.777575 CATTTCTTTGCTTTTGTTTCTTCATTT 57.222 25.926 0.00 0.00 0.00 2.32
2667 5295 9.824534 TTTCTTTGCTTTTGTTTCTTCATTTTC 57.175 25.926 0.00 0.00 0.00 2.29
2668 5296 8.776376 TCTTTGCTTTTGTTTCTTCATTTTCT 57.224 26.923 0.00 0.00 0.00 2.52
2669 5297 9.218440 TCTTTGCTTTTGTTTCTTCATTTTCTT 57.782 25.926 0.00 0.00 0.00 2.52
2670 5298 9.269415 CTTTGCTTTTGTTTCTTCATTTTCTTG 57.731 29.630 0.00 0.00 0.00 3.02
2671 5299 7.903995 TGCTTTTGTTTCTTCATTTTCTTGT 57.096 28.000 0.00 0.00 0.00 3.16
2672 5300 8.321650 TGCTTTTGTTTCTTCATTTTCTTGTT 57.678 26.923 0.00 0.00 0.00 2.83
2673 5301 8.442384 TGCTTTTGTTTCTTCATTTTCTTGTTC 58.558 29.630 0.00 0.00 0.00 3.18
2674 5302 8.659491 GCTTTTGTTTCTTCATTTTCTTGTTCT 58.341 29.630 0.00 0.00 0.00 3.01
2677 5305 7.969387 TGTTTCTTCATTTTCTTGTTCTTCG 57.031 32.000 0.00 0.00 0.00 3.79
2678 5306 7.535139 TGTTTCTTCATTTTCTTGTTCTTCGT 58.465 30.769 0.00 0.00 0.00 3.85
2679 5307 8.026607 TGTTTCTTCATTTTCTTGTTCTTCGTT 58.973 29.630 0.00 0.00 0.00 3.85
2680 5308 8.860128 GTTTCTTCATTTTCTTGTTCTTCGTTT 58.140 29.630 0.00 0.00 0.00 3.60
2681 5309 8.980143 TTCTTCATTTTCTTGTTCTTCGTTTT 57.020 26.923 0.00 0.00 0.00 2.43
2682 5310 8.980143 TCTTCATTTTCTTGTTCTTCGTTTTT 57.020 26.923 0.00 0.00 0.00 1.94
2683 5311 9.072294 TCTTCATTTTCTTGTTCTTCGTTTTTC 57.928 29.630 0.00 0.00 0.00 2.29
2684 5312 8.980143 TTCATTTTCTTGTTCTTCGTTTTTCT 57.020 26.923 0.00 0.00 0.00 2.52
2685 5313 8.980143 TCATTTTCTTGTTCTTCGTTTTTCTT 57.020 26.923 0.00 0.00 0.00 2.52
2686 5314 9.072294 TCATTTTCTTGTTCTTCGTTTTTCTTC 57.928 29.630 0.00 0.00 0.00 2.87
2687 5315 8.859156 CATTTTCTTGTTCTTCGTTTTTCTTCA 58.141 29.630 0.00 0.00 0.00 3.02
2688 5316 8.980143 TTTTCTTGTTCTTCGTTTTTCTTCAT 57.020 26.923 0.00 0.00 0.00 2.57
2689 5317 8.614994 TTTCTTGTTCTTCGTTTTTCTTCATC 57.385 30.769 0.00 0.00 0.00 2.92
2690 5318 7.553881 TCTTGTTCTTCGTTTTTCTTCATCT 57.446 32.000 0.00 0.00 0.00 2.90
2691 5319 7.985476 TCTTGTTCTTCGTTTTTCTTCATCTT 58.015 30.769 0.00 0.00 0.00 2.40
2692 5320 8.458843 TCTTGTTCTTCGTTTTTCTTCATCTTT 58.541 29.630 0.00 0.00 0.00 2.52
2693 5321 8.980143 TTGTTCTTCGTTTTTCTTCATCTTTT 57.020 26.923 0.00 0.00 0.00 2.27
2694 5322 8.614994 TGTTCTTCGTTTTTCTTCATCTTTTC 57.385 30.769 0.00 0.00 0.00 2.29
2695 5323 8.240682 TGTTCTTCGTTTTTCTTCATCTTTTCA 58.759 29.630 0.00 0.00 0.00 2.69
2696 5324 9.237846 GTTCTTCGTTTTTCTTCATCTTTTCAT 57.762 29.630 0.00 0.00 0.00 2.57
2697 5325 9.801873 TTCTTCGTTTTTCTTCATCTTTTCATT 57.198 25.926 0.00 0.00 0.00 2.57
2701 5329 9.840427 TCGTTTTTCTTCATCTTTTCATTATCC 57.160 29.630 0.00 0.00 0.00 2.59
2702 5330 8.788813 CGTTTTTCTTCATCTTTTCATTATCCG 58.211 33.333 0.00 0.00 0.00 4.18
2703 5331 9.840427 GTTTTTCTTCATCTTTTCATTATCCGA 57.160 29.630 0.00 0.00 0.00 4.55
2705 5333 9.840427 TTTTCTTCATCTTTTCATTATCCGAAC 57.160 29.630 0.00 0.00 0.00 3.95
2706 5334 7.234187 TCTTCATCTTTTCATTATCCGAACG 57.766 36.000 0.00 0.00 0.00 3.95
2707 5335 5.403897 TCATCTTTTCATTATCCGAACGC 57.596 39.130 0.00 0.00 0.00 4.84
2708 5336 5.116180 TCATCTTTTCATTATCCGAACGCT 58.884 37.500 0.00 0.00 0.00 5.07
2709 5337 5.584649 TCATCTTTTCATTATCCGAACGCTT 59.415 36.000 0.00 0.00 0.00 4.68
2710 5338 6.759356 TCATCTTTTCATTATCCGAACGCTTA 59.241 34.615 0.00 0.00 0.00 3.09
2711 5339 7.441157 TCATCTTTTCATTATCCGAACGCTTAT 59.559 33.333 0.00 0.00 0.00 1.73
2712 5340 7.548196 TCTTTTCATTATCCGAACGCTTATT 57.452 32.000 0.00 0.00 0.00 1.40
2713 5341 7.627340 TCTTTTCATTATCCGAACGCTTATTC 58.373 34.615 0.00 0.00 0.00 1.75
2724 5352 5.013861 GAACGCTTATTCGACACTTTTCA 57.986 39.130 0.00 0.00 0.00 2.69
2725 5353 5.412526 AACGCTTATTCGACACTTTTCAA 57.587 34.783 0.00 0.00 0.00 2.69
2726 5354 5.412526 ACGCTTATTCGACACTTTTCAAA 57.587 34.783 0.00 0.00 0.00 2.69
2727 5355 5.997385 ACGCTTATTCGACACTTTTCAAAT 58.003 33.333 0.00 0.00 0.00 2.32
2728 5356 7.124347 ACGCTTATTCGACACTTTTCAAATA 57.876 32.000 0.00 0.00 0.00 1.40
2729 5357 7.013529 ACGCTTATTCGACACTTTTCAAATAC 58.986 34.615 0.00 0.00 0.00 1.89
2730 5358 7.095355 ACGCTTATTCGACACTTTTCAAATACT 60.095 33.333 0.00 0.00 0.00 2.12
2731 5359 7.744715 CGCTTATTCGACACTTTTCAAATACTT 59.255 33.333 0.00 0.00 0.00 2.24
2732 5360 8.840867 GCTTATTCGACACTTTTCAAATACTTG 58.159 33.333 0.00 0.00 0.00 3.16
2733 5361 9.878599 CTTATTCGACACTTTTCAAATACTTGT 57.121 29.630 0.00 0.00 33.94 3.16
2736 5364 8.973835 TTCGACACTTTTCAAATACTTGTTTT 57.026 26.923 0.00 0.00 33.94 2.43
2738 5366 9.493206 TCGACACTTTTCAAATACTTGTTTTAC 57.507 29.630 0.00 0.00 33.94 2.01
2739 5367 9.279904 CGACACTTTTCAAATACTTGTTTTACA 57.720 29.630 0.00 0.00 33.94 2.41
2760 5388 9.915629 TTTACATTTTAACACTTGTTCAACACT 57.084 25.926 0.00 0.00 39.31 3.55
2761 5389 9.915629 TTACATTTTAACACTTGTTCAACACTT 57.084 25.926 0.00 0.00 39.31 3.16
2762 5390 8.825667 ACATTTTAACACTTGTTCAACACTTT 57.174 26.923 0.00 0.00 39.31 2.66
2763 5391 9.267084 ACATTTTAACACTTGTTCAACACTTTT 57.733 25.926 0.00 0.00 39.31 2.27
2764 5392 9.739786 CATTTTAACACTTGTTCAACACTTTTC 57.260 29.630 0.00 0.00 39.31 2.29
2765 5393 8.873215 TTTTAACACTTGTTCAACACTTTTCA 57.127 26.923 0.00 0.00 39.31 2.69
2766 5394 8.873215 TTTAACACTTGTTCAACACTTTTCAA 57.127 26.923 0.00 0.00 39.31 2.69
2767 5395 8.873215 TTAACACTTGTTCAACACTTTTCAAA 57.127 26.923 0.00 0.00 39.31 2.69
2768 5396 7.961325 AACACTTGTTCAACACTTTTCAAAT 57.039 28.000 0.00 0.00 31.64 2.32
2770 5398 8.460831 ACACTTGTTCAACACTTTTCAAATAC 57.539 30.769 0.00 0.00 0.00 1.89
2771 5399 8.303876 ACACTTGTTCAACACTTTTCAAATACT 58.696 29.630 0.00 0.00 0.00 2.12
2772 5400 8.798153 CACTTGTTCAACACTTTTCAAATACTC 58.202 33.333 0.00 0.00 0.00 2.59
2773 5401 7.696453 ACTTGTTCAACACTTTTCAAATACTCG 59.304 33.333 0.00 0.00 0.00 4.18
2774 5402 7.079182 TGTTCAACACTTTTCAAATACTCGT 57.921 32.000 0.00 0.00 0.00 4.18
2775 5403 7.531716 TGTTCAACACTTTTCAAATACTCGTT 58.468 30.769 0.00 0.00 0.00 3.85
2776 5404 7.694784 TGTTCAACACTTTTCAAATACTCGTTC 59.305 33.333 0.00 0.00 0.00 3.95
2777 5405 7.310072 TCAACACTTTTCAAATACTCGTTCA 57.690 32.000 0.00 0.00 0.00 3.18
2778 5406 7.753659 TCAACACTTTTCAAATACTCGTTCAA 58.246 30.769 0.00 0.00 0.00 2.69
2779 5407 7.694784 TCAACACTTTTCAAATACTCGTTCAAC 59.305 33.333 0.00 0.00 0.00 3.18
2780 5408 7.079182 ACACTTTTCAAATACTCGTTCAACA 57.921 32.000 0.00 0.00 0.00 3.33
2781 5409 7.703328 ACACTTTTCAAATACTCGTTCAACAT 58.297 30.769 0.00 0.00 0.00 2.71
2782 5410 8.188139 ACACTTTTCAAATACTCGTTCAACATT 58.812 29.630 0.00 0.00 0.00 2.71
2783 5411 9.019764 CACTTTTCAAATACTCGTTCAACATTT 57.980 29.630 0.00 0.00 0.00 2.32
2784 5412 9.581099 ACTTTTCAAATACTCGTTCAACATTTT 57.419 25.926 0.00 0.00 0.00 1.82
2815 5443 9.890352 TTTTTGTTTTTCTCTTGTTTCATTTGG 57.110 25.926 0.00 0.00 0.00 3.28
2816 5444 8.614469 TTTGTTTTTCTCTTGTTTCATTTGGT 57.386 26.923 0.00 0.00 0.00 3.67
2817 5445 8.614469 TTGTTTTTCTCTTGTTTCATTTGGTT 57.386 26.923 0.00 0.00 0.00 3.67
2818 5446 8.614469 TGTTTTTCTCTTGTTTCATTTGGTTT 57.386 26.923 0.00 0.00 0.00 3.27
2819 5447 9.061435 TGTTTTTCTCTTGTTTCATTTGGTTTT 57.939 25.926 0.00 0.00 0.00 2.43
2820 5448 9.541724 GTTTTTCTCTTGTTTCATTTGGTTTTC 57.458 29.630 0.00 0.00 0.00 2.29
2821 5449 9.500785 TTTTTCTCTTGTTTCATTTGGTTTTCT 57.499 25.926 0.00 0.00 0.00 2.52
2822 5450 9.500785 TTTTCTCTTGTTTCATTTGGTTTTCTT 57.499 25.926 0.00 0.00 0.00 2.52
2823 5451 8.702163 TTCTCTTGTTTCATTTGGTTTTCTTC 57.298 30.769 0.00 0.00 0.00 2.87
2824 5452 8.066612 TCTCTTGTTTCATTTGGTTTTCTTCT 57.933 30.769 0.00 0.00 0.00 2.85
2825 5453 8.190784 TCTCTTGTTTCATTTGGTTTTCTTCTC 58.809 33.333 0.00 0.00 0.00 2.87
2826 5454 8.066612 TCTTGTTTCATTTGGTTTTCTTCTCT 57.933 30.769 0.00 0.00 0.00 3.10
2827 5455 8.531146 TCTTGTTTCATTTGGTTTTCTTCTCTT 58.469 29.630 0.00 0.00 0.00 2.85
2828 5456 9.154847 CTTGTTTCATTTGGTTTTCTTCTCTTT 57.845 29.630 0.00 0.00 0.00 2.52
2829 5457 9.500785 TTGTTTCATTTGGTTTTCTTCTCTTTT 57.499 25.926 0.00 0.00 0.00 2.27
2830 5458 9.500785 TGTTTCATTTGGTTTTCTTCTCTTTTT 57.499 25.926 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.753438 TGTAGCAATAGTAGCAGTACAATGC 59.247 40.000 0.00 0.00 46.88 3.56
2 3 6.980978 AGTGTAGCAATAGTAGCAGTACAATG 59.019 38.462 0.00 0.00 28.58 2.82
3 4 7.113658 AGTGTAGCAATAGTAGCAGTACAAT 57.886 36.000 0.00 0.00 28.58 2.71
5 6 6.238293 CGTAGTGTAGCAATAGTAGCAGTACA 60.238 42.308 0.00 0.00 34.34 2.90
8 9 4.497674 GCGTAGTGTAGCAATAGTAGCAGT 60.498 45.833 0.00 0.00 0.00 4.40
9 10 3.975670 GCGTAGTGTAGCAATAGTAGCAG 59.024 47.826 0.00 0.00 0.00 4.24
10 11 3.379057 TGCGTAGTGTAGCAATAGTAGCA 59.621 43.478 0.00 0.00 40.78 3.49
11 12 3.961182 TGCGTAGTGTAGCAATAGTAGC 58.039 45.455 0.00 0.00 40.78 3.58
20 21 3.060895 GTCACATTCTTGCGTAGTGTAGC 59.939 47.826 0.00 0.00 0.00 3.58
32 33 3.023119 TGCCAAAGTGTGTCACATTCTT 58.977 40.909 9.31 5.99 36.74 2.52
71 72 0.452784 CGCCTAAAGTCAAAGCGTGC 60.453 55.000 0.00 0.00 41.78 5.34
151 153 8.904834 CAGAAGACTGGTATTTTACTCTAGCTA 58.095 37.037 0.00 0.00 40.14 3.32
178 180 4.514441 GGCTGATTACTACGTCTACTGCTA 59.486 45.833 0.00 0.00 0.00 3.49
179 181 3.315749 GGCTGATTACTACGTCTACTGCT 59.684 47.826 0.00 0.00 0.00 4.24
180 182 3.630101 GGCTGATTACTACGTCTACTGC 58.370 50.000 0.00 0.00 0.00 4.40
187 189 4.708726 AAGTTACGGCTGATTACTACGT 57.291 40.909 0.00 0.00 41.10 3.57
198 200 1.336755 CCAGCAACAAAAGTTACGGCT 59.663 47.619 0.00 0.00 0.00 5.52
205 207 4.384940 ACAACAAAACCAGCAACAAAAGT 58.615 34.783 0.00 0.00 0.00 2.66
206 208 5.637387 AGTACAACAAAACCAGCAACAAAAG 59.363 36.000 0.00 0.00 0.00 2.27
210 212 6.458232 AATAGTACAACAAAACCAGCAACA 57.542 33.333 0.00 0.00 0.00 3.33
211 213 6.575942 CGTAATAGTACAACAAAACCAGCAAC 59.424 38.462 0.78 0.00 0.00 4.17
220 242 5.220322 CGCTGCATCGTAATAGTACAACAAA 60.220 40.000 0.88 0.00 0.00 2.83
221 243 4.266739 CGCTGCATCGTAATAGTACAACAA 59.733 41.667 0.88 0.00 0.00 2.83
222 244 3.794564 CGCTGCATCGTAATAGTACAACA 59.205 43.478 0.88 0.00 0.00 3.33
223 245 3.795101 ACGCTGCATCGTAATAGTACAAC 59.205 43.478 14.85 0.00 41.36 3.32
226 248 5.385396 AAAACGCTGCATCGTAATAGTAC 57.615 39.130 16.83 0.00 42.46 2.73
230 252 5.539582 AAGAAAAACGCTGCATCGTAATA 57.460 34.783 16.83 0.00 42.46 0.98
232 254 3.889196 AAGAAAAACGCTGCATCGTAA 57.111 38.095 16.83 0.00 42.46 3.18
235 257 3.455619 AGTAAGAAAAACGCTGCATCG 57.544 42.857 8.66 8.66 0.00 3.84
237 259 6.072728 TGTTGATAGTAAGAAAAACGCTGCAT 60.073 34.615 0.00 0.00 0.00 3.96
239 261 5.685841 TGTTGATAGTAAGAAAAACGCTGC 58.314 37.500 0.00 0.00 0.00 5.25
240 262 6.961554 GGATGTTGATAGTAAGAAAAACGCTG 59.038 38.462 0.00 0.00 0.00 5.18
242 264 6.837992 TGGATGTTGATAGTAAGAAAAACGC 58.162 36.000 0.00 0.00 0.00 4.84
273 302 9.757227 TGTTTTCCGTCAAAATGAGAATATTTT 57.243 25.926 0.00 0.00 40.00 1.82
282 311 7.891561 AGGATTATTGTTTTCCGTCAAAATGA 58.108 30.769 0.00 0.00 36.35 2.57
283 312 7.812191 TGAGGATTATTGTTTTCCGTCAAAATG 59.188 33.333 0.00 0.00 36.35 2.32
289 318 5.875359 ACTCTGAGGATTATTGTTTTCCGTC 59.125 40.000 9.85 0.00 34.61 4.79
292 321 8.964476 TGATACTCTGAGGATTATTGTTTTCC 57.036 34.615 9.85 0.00 0.00 3.13
305 334 6.533730 ACTCTGATACTCTGATACTCTGAGG 58.466 44.000 9.85 0.00 43.89 3.86
321 350 7.971722 TCGTTGAAAATCACGAATACTCTGATA 59.028 33.333 0.00 0.00 31.04 2.15
324 353 6.389622 TCGTTGAAAATCACGAATACTCTG 57.610 37.500 0.00 0.00 31.04 3.35
327 356 6.961359 TGATCGTTGAAAATCACGAATACT 57.039 33.333 0.00 0.00 35.10 2.12
330 359 9.787532 AATATTTGATCGTTGAAAATCACGAAT 57.212 25.926 0.00 0.00 35.10 3.34
331 360 9.272901 GAATATTTGATCGTTGAAAATCACGAA 57.727 29.630 0.00 0.00 35.10 3.85
332 361 7.634432 CGAATATTTGATCGTTGAAAATCACGA 59.366 33.333 0.00 0.00 35.59 4.35
333 362 7.634432 TCGAATATTTGATCGTTGAAAATCACG 59.366 33.333 0.88 0.00 39.91 4.35
334 363 8.820628 TCGAATATTTGATCGTTGAAAATCAC 57.179 30.769 0.88 0.00 39.91 3.06
353 382 5.049954 CCGAACCAAGTTCACTTTTCGAATA 60.050 40.000 20.53 0.00 43.42 1.75
358 387 2.357952 AGCCGAACCAAGTTCACTTTTC 59.642 45.455 8.11 0.00 42.05 2.29
378 407 1.159713 TGACGTGCTGTTCTGCCAAG 61.160 55.000 0.00 0.00 0.00 3.61
381 410 0.593128 AAATGACGTGCTGTTCTGCC 59.407 50.000 0.00 0.00 0.00 4.85
384 413 1.334059 CGCAAAATGACGTGCTGTTCT 60.334 47.619 0.00 0.00 38.66 3.01
385 414 1.044725 CGCAAAATGACGTGCTGTTC 58.955 50.000 0.00 0.00 38.66 3.18
386 415 0.317770 CCGCAAAATGACGTGCTGTT 60.318 50.000 0.00 0.00 38.66 3.16
388 417 0.998226 CACCGCAAAATGACGTGCTG 60.998 55.000 0.00 0.00 38.66 4.41
389 418 1.163420 TCACCGCAAAATGACGTGCT 61.163 50.000 0.00 0.00 38.66 4.40
390 419 0.109781 ATCACCGCAAAATGACGTGC 60.110 50.000 0.00 0.00 37.40 5.34
392 421 1.518325 TGATCACCGCAAAATGACGT 58.482 45.000 0.00 0.00 0.00 4.34
393 422 2.610219 TTGATCACCGCAAAATGACG 57.390 45.000 0.00 0.00 0.00 4.35
394 423 3.900941 AGTTTGATCACCGCAAAATGAC 58.099 40.909 0.00 0.00 37.03 3.06
395 424 4.759693 AGTAGTTTGATCACCGCAAAATGA 59.240 37.500 0.00 0.00 37.03 2.57
404 2731 6.038997 AGTTACTCCAGTAGTTTGATCACC 57.961 41.667 0.00 0.00 39.80 4.02
436 2988 0.884704 TCCTGTGAGTTTTCAGCGCC 60.885 55.000 2.29 0.00 32.98 6.53
438 2990 1.528586 CTGTCCTGTGAGTTTTCAGCG 59.471 52.381 0.00 0.00 32.98 5.18
470 3022 7.178983 TGTGAGGTGATGAGCATGTCATATATA 59.821 37.037 9.76 0.00 46.64 0.86
471 3023 6.013984 TGTGAGGTGATGAGCATGTCATATAT 60.014 38.462 9.76 0.00 46.64 0.86
472 3024 5.305128 TGTGAGGTGATGAGCATGTCATATA 59.695 40.000 9.76 2.43 46.64 0.86
473 3025 4.102054 TGTGAGGTGATGAGCATGTCATAT 59.898 41.667 9.76 0.00 46.64 1.78
598 3157 2.478547 TCGAACGCTAATGTATCGCA 57.521 45.000 0.00 0.00 33.76 5.10
603 3162 4.202172 TGGATTGGATCGAACGCTAATGTA 60.202 41.667 0.00 0.00 0.00 2.29
616 3175 6.501781 GTTGAGTTCATGATTGGATTGGATC 58.498 40.000 0.00 0.00 0.00 3.36
653 3222 2.485814 GGTAGGCTGCTCTTGACTTTTG 59.514 50.000 1.79 0.00 0.00 2.44
750 3319 3.175594 ACATTTCATGTTGCAAGGGGAT 58.824 40.909 0.00 0.00 41.63 3.85
924 3505 1.009829 CAAGATCGTACCCTGCTTGC 58.990 55.000 0.00 0.00 30.92 4.01
932 3513 3.181479 TGGTACTGATGCAAGATCGTACC 60.181 47.826 20.79 20.79 42.08 3.34
947 3528 0.811616 GGCCGAGCAAGATGGTACTG 60.812 60.000 0.00 0.00 0.00 2.74
1044 3627 3.195698 GTCCATTGAGCCGCCGAC 61.196 66.667 0.00 0.00 0.00 4.79
1146 3729 4.201920 GGAGCTAACTAGAAAATTTGGCGG 60.202 45.833 0.00 0.00 0.00 6.13
1157 3740 4.262635 GCATAAGCCATGGAGCTAACTAGA 60.263 45.833 18.40 0.00 44.11 2.43
1158 3741 3.999663 GCATAAGCCATGGAGCTAACTAG 59.000 47.826 18.40 0.00 44.11 2.57
1159 3742 3.648067 AGCATAAGCCATGGAGCTAACTA 59.352 43.478 18.40 0.00 44.11 2.24
1189 3801 1.228063 ATGAGATCCGTGCATGGGC 60.228 57.895 24.78 16.56 41.68 5.36
1204 3816 2.418777 CGCCGCCTGATGAGATGA 59.581 61.111 0.00 0.00 0.00 2.92
1205 3817 3.344215 GCGCCGCCTGATGAGATG 61.344 66.667 0.00 0.00 0.00 2.90
1206 3818 4.615815 GGCGCCGCCTGATGAGAT 62.616 66.667 23.30 0.00 46.69 2.75
1910 4533 2.182842 GGCCACCGATAAGCTGCAG 61.183 63.158 10.11 10.11 0.00 4.41
1911 4534 2.124736 GGCCACCGATAAGCTGCA 60.125 61.111 0.00 0.00 0.00 4.41
1912 4535 1.312371 TTTGGCCACCGATAAGCTGC 61.312 55.000 3.88 0.00 0.00 5.25
1913 4536 1.392589 ATTTGGCCACCGATAAGCTG 58.607 50.000 3.88 0.00 0.00 4.24
1914 4537 2.143876 AATTTGGCCACCGATAAGCT 57.856 45.000 3.88 0.00 0.00 3.74
1995 4618 7.490657 ACCCAGAAACATACTGTTCAGTATA 57.509 36.000 20.43 2.19 40.14 1.47
1996 4619 6.374417 ACCCAGAAACATACTGTTCAGTAT 57.626 37.500 16.70 16.70 40.14 2.12
2127 4753 9.429359 GATACTCACAATGCAGTAAGCTTATAT 57.571 33.333 9.88 0.00 45.94 0.86
2128 4754 8.421002 TGATACTCACAATGCAGTAAGCTTATA 58.579 33.333 9.88 0.00 45.94 0.98
2138 4764 5.050644 TGCTTTTGATACTCACAATGCAG 57.949 39.130 0.00 0.00 31.36 4.41
2247 4875 3.796504 GCCAATGTCAACTTTCACACTGG 60.797 47.826 0.00 0.00 0.00 4.00
2300 4928 3.288092 AGAAGAAACCAGGTTTGTGGAC 58.712 45.455 22.98 12.89 40.44 4.02
2306 4934 6.427441 AGAAGAAGAAGAAGAAACCAGGTTT 58.573 36.000 18.10 18.10 38.54 3.27
2307 4935 6.007485 AGAAGAAGAAGAAGAAACCAGGTT 57.993 37.500 0.00 0.00 0.00 3.50
2308 4936 5.638530 AGAAGAAGAAGAAGAAACCAGGT 57.361 39.130 0.00 0.00 0.00 4.00
2309 4937 6.295249 AGAAGAAGAAGAAGAAGAAACCAGG 58.705 40.000 0.00 0.00 0.00 4.45
2310 4938 7.714813 AGAAGAAGAAGAAGAAGAAGAAACCAG 59.285 37.037 0.00 0.00 0.00 4.00
2311 4939 7.569240 AGAAGAAGAAGAAGAAGAAGAAACCA 58.431 34.615 0.00 0.00 0.00 3.67
2312 4940 8.445275 AAGAAGAAGAAGAAGAAGAAGAAACC 57.555 34.615 0.00 0.00 0.00 3.27
2341 4969 0.673437 CCAGGCTCTTTCCGCAAAAA 59.327 50.000 0.00 0.00 0.00 1.94
2342 4970 0.467290 ACCAGGCTCTTTCCGCAAAA 60.467 50.000 0.00 0.00 0.00 2.44
2343 4971 0.467290 AACCAGGCTCTTTCCGCAAA 60.467 50.000 0.00 0.00 0.00 3.68
2344 4972 0.467290 AAACCAGGCTCTTTCCGCAA 60.467 50.000 0.00 0.00 0.00 4.85
2345 4973 0.889186 GAAACCAGGCTCTTTCCGCA 60.889 55.000 3.67 0.00 0.00 5.69
2346 4974 0.606673 AGAAACCAGGCTCTTTCCGC 60.607 55.000 9.55 0.00 0.00 5.54
2347 4975 1.897560 AAGAAACCAGGCTCTTTCCG 58.102 50.000 9.55 0.00 0.00 4.30
2348 4976 4.399219 AGTAAAGAAACCAGGCTCTTTCC 58.601 43.478 16.94 8.98 40.27 3.13
2349 4977 6.485648 TGTTAGTAAAGAAACCAGGCTCTTTC 59.514 38.462 16.94 6.65 40.27 2.62
2350 4978 6.262496 GTGTTAGTAAAGAAACCAGGCTCTTT 59.738 38.462 17.39 17.39 42.88 2.52
2351 4979 5.763698 GTGTTAGTAAAGAAACCAGGCTCTT 59.236 40.000 0.00 0.00 33.25 2.85
2352 4980 5.306394 GTGTTAGTAAAGAAACCAGGCTCT 58.694 41.667 0.00 0.00 0.00 4.09
2353 4981 4.151867 CGTGTTAGTAAAGAAACCAGGCTC 59.848 45.833 0.00 0.00 0.00 4.70
2354 4982 4.062991 CGTGTTAGTAAAGAAACCAGGCT 58.937 43.478 0.00 0.00 0.00 4.58
2355 4983 3.187842 CCGTGTTAGTAAAGAAACCAGGC 59.812 47.826 0.00 0.00 0.00 4.85
2356 4984 3.749609 CCCGTGTTAGTAAAGAAACCAGG 59.250 47.826 0.00 0.00 0.00 4.45
2357 4985 4.634199 TCCCGTGTTAGTAAAGAAACCAG 58.366 43.478 0.00 0.00 0.00 4.00
2358 4986 4.686191 TCCCGTGTTAGTAAAGAAACCA 57.314 40.909 0.00 0.00 0.00 3.67
2359 4987 4.453478 CCTTCCCGTGTTAGTAAAGAAACC 59.547 45.833 0.00 0.00 0.00 3.27
2360 4988 5.049886 CACCTTCCCGTGTTAGTAAAGAAAC 60.050 44.000 0.00 0.00 0.00 2.78
2361 4989 5.058490 CACCTTCCCGTGTTAGTAAAGAAA 58.942 41.667 0.00 0.00 0.00 2.52
2362 4990 4.344679 TCACCTTCCCGTGTTAGTAAAGAA 59.655 41.667 0.00 0.00 35.18 2.52
2363 4991 3.896888 TCACCTTCCCGTGTTAGTAAAGA 59.103 43.478 0.00 0.00 35.18 2.52
2364 4992 4.261578 TCACCTTCCCGTGTTAGTAAAG 57.738 45.455 0.00 0.00 35.18 1.85
2365 4993 4.686191 TTCACCTTCCCGTGTTAGTAAA 57.314 40.909 0.00 0.00 35.18 2.01
2366 4994 4.571919 CATTCACCTTCCCGTGTTAGTAA 58.428 43.478 0.00 0.00 35.18 2.24
2367 4995 3.618019 GCATTCACCTTCCCGTGTTAGTA 60.618 47.826 0.00 0.00 35.18 1.82
2368 4996 2.874457 GCATTCACCTTCCCGTGTTAGT 60.874 50.000 0.00 0.00 35.18 2.24
2369 4997 1.737793 GCATTCACCTTCCCGTGTTAG 59.262 52.381 0.00 0.00 35.18 2.34
2370 4998 1.612199 GGCATTCACCTTCCCGTGTTA 60.612 52.381 0.00 0.00 35.18 2.41
2371 4999 0.893727 GGCATTCACCTTCCCGTGTT 60.894 55.000 0.00 0.00 35.18 3.32
2372 5000 1.303317 GGCATTCACCTTCCCGTGT 60.303 57.895 0.00 0.00 35.18 4.49
2373 5001 2.046285 GGGCATTCACCTTCCCGTG 61.046 63.158 0.00 0.00 34.93 4.94
2374 5002 1.863155 ATGGGCATTCACCTTCCCGT 61.863 55.000 0.00 0.00 41.65 5.28
2375 5003 0.684153 AATGGGCATTCACCTTCCCG 60.684 55.000 0.00 0.00 41.65 5.14
2376 5004 2.452600 TAATGGGCATTCACCTTCCC 57.547 50.000 0.00 0.00 39.22 3.97
2377 5005 3.631250 TCTTAATGGGCATTCACCTTCC 58.369 45.455 0.00 0.00 32.50 3.46
2378 5006 5.859205 AATCTTAATGGGCATTCACCTTC 57.141 39.130 0.00 0.00 32.50 3.46
2379 5007 7.732222 TTTAATCTTAATGGGCATTCACCTT 57.268 32.000 0.00 0.00 32.50 3.50
2380 5008 7.732222 TTTTAATCTTAATGGGCATTCACCT 57.268 32.000 0.00 0.00 32.50 4.00
2381 5009 7.657354 GGATTTTAATCTTAATGGGCATTCACC 59.343 37.037 2.77 0.00 35.73 4.02
2382 5010 7.657354 GGGATTTTAATCTTAATGGGCATTCAC 59.343 37.037 2.77 0.00 35.73 3.18
2383 5011 7.471260 CGGGATTTTAATCTTAATGGGCATTCA 60.471 37.037 2.77 0.00 35.73 2.57
2384 5012 6.868339 CGGGATTTTAATCTTAATGGGCATTC 59.132 38.462 2.77 0.00 35.73 2.67
2385 5013 6.239572 CCGGGATTTTAATCTTAATGGGCATT 60.240 38.462 0.00 0.00 35.73 3.56
2386 5014 5.245977 CCGGGATTTTAATCTTAATGGGCAT 59.754 40.000 0.00 0.00 35.73 4.40
2387 5015 4.586841 CCGGGATTTTAATCTTAATGGGCA 59.413 41.667 0.00 0.00 35.73 5.36
2388 5016 4.560716 GCCGGGATTTTAATCTTAATGGGC 60.561 45.833 2.18 0.00 35.73 5.36
2389 5017 4.021456 GGCCGGGATTTTAATCTTAATGGG 60.021 45.833 2.18 0.00 35.73 4.00
2390 5018 4.021456 GGGCCGGGATTTTAATCTTAATGG 60.021 45.833 2.18 0.49 35.73 3.16
2391 5019 4.586841 TGGGCCGGGATTTTAATCTTAATG 59.413 41.667 2.18 0.00 35.73 1.90
2392 5020 4.587262 GTGGGCCGGGATTTTAATCTTAAT 59.413 41.667 2.18 0.00 35.73 1.40
2393 5021 3.955551 GTGGGCCGGGATTTTAATCTTAA 59.044 43.478 2.18 0.00 35.73 1.85
2394 5022 3.053544 TGTGGGCCGGGATTTTAATCTTA 60.054 43.478 2.18 0.00 35.73 2.10
2395 5023 2.291930 TGTGGGCCGGGATTTTAATCTT 60.292 45.455 2.18 0.00 35.73 2.40
2396 5024 1.286553 TGTGGGCCGGGATTTTAATCT 59.713 47.619 2.18 0.00 35.73 2.40
2397 5025 1.770294 TGTGGGCCGGGATTTTAATC 58.230 50.000 2.18 0.00 34.66 1.75
2398 5026 2.239681 TTGTGGGCCGGGATTTTAAT 57.760 45.000 2.18 0.00 0.00 1.40
2399 5027 2.239681 ATTGTGGGCCGGGATTTTAA 57.760 45.000 2.18 0.00 0.00 1.52
2400 5028 2.104170 GAATTGTGGGCCGGGATTTTA 58.896 47.619 2.18 0.00 0.00 1.52
2401 5029 0.901827 GAATTGTGGGCCGGGATTTT 59.098 50.000 2.18 0.00 0.00 1.82
2402 5030 0.252012 TGAATTGTGGGCCGGGATTT 60.252 50.000 2.18 0.00 0.00 2.17
2403 5031 0.684153 CTGAATTGTGGGCCGGGATT 60.684 55.000 2.18 0.00 0.00 3.01
2404 5032 1.076777 CTGAATTGTGGGCCGGGAT 60.077 57.895 2.18 0.00 0.00 3.85
2405 5033 2.354729 CTGAATTGTGGGCCGGGA 59.645 61.111 2.18 0.00 0.00 5.14
2406 5034 2.755469 CCTGAATTGTGGGCCGGG 60.755 66.667 2.18 0.00 0.00 5.73
2407 5035 3.451894 GCCTGAATTGTGGGCCGG 61.452 66.667 0.00 0.00 39.96 6.13
2408 5036 3.814268 CGCCTGAATTGTGGGCCG 61.814 66.667 0.00 1.09 42.58 6.13
2409 5037 2.361104 TCGCCTGAATTGTGGGCC 60.361 61.111 0.00 0.00 42.58 5.80
2410 5038 3.056313 GCTCGCCTGAATTGTGGGC 62.056 63.158 0.00 0.00 42.18 5.36
2411 5039 0.107703 TAGCTCGCCTGAATTGTGGG 60.108 55.000 0.00 0.00 0.00 4.61
2412 5040 1.737838 TTAGCTCGCCTGAATTGTGG 58.262 50.000 0.00 0.00 0.00 4.17
2413 5041 3.492313 GTTTTAGCTCGCCTGAATTGTG 58.508 45.455 0.00 0.00 0.00 3.33
2414 5042 2.488153 GGTTTTAGCTCGCCTGAATTGT 59.512 45.455 0.00 0.00 0.00 2.71
2415 5043 2.159379 GGGTTTTAGCTCGCCTGAATTG 60.159 50.000 0.00 0.00 0.00 2.32
2416 5044 2.092323 GGGTTTTAGCTCGCCTGAATT 58.908 47.619 0.00 0.00 0.00 2.17
2417 5045 1.004277 TGGGTTTTAGCTCGCCTGAAT 59.996 47.619 0.00 0.00 0.00 2.57
2418 5046 0.398696 TGGGTTTTAGCTCGCCTGAA 59.601 50.000 0.00 0.00 0.00 3.02
2419 5047 0.321298 GTGGGTTTTAGCTCGCCTGA 60.321 55.000 0.00 0.00 0.00 3.86
2420 5048 1.635663 CGTGGGTTTTAGCTCGCCTG 61.636 60.000 0.00 0.00 0.00 4.85
2421 5049 1.375523 CGTGGGTTTTAGCTCGCCT 60.376 57.895 0.00 0.00 0.00 5.52
2422 5050 1.375013 TCGTGGGTTTTAGCTCGCC 60.375 57.895 0.00 0.00 0.00 5.54
2423 5051 1.632948 GGTCGTGGGTTTTAGCTCGC 61.633 60.000 0.00 0.00 0.00 5.03
2424 5052 1.017701 GGGTCGTGGGTTTTAGCTCG 61.018 60.000 0.00 0.00 0.00 5.03
2425 5053 0.323957 AGGGTCGTGGGTTTTAGCTC 59.676 55.000 0.00 0.00 0.00 4.09
2426 5054 1.277273 GTAGGGTCGTGGGTTTTAGCT 59.723 52.381 0.00 0.00 0.00 3.32
2427 5055 1.730501 GTAGGGTCGTGGGTTTTAGC 58.269 55.000 0.00 0.00 0.00 3.09
2428 5056 1.545582 TCGTAGGGTCGTGGGTTTTAG 59.454 52.381 0.00 0.00 0.00 1.85
2429 5057 1.626686 TCGTAGGGTCGTGGGTTTTA 58.373 50.000 0.00 0.00 0.00 1.52
2430 5058 0.978907 ATCGTAGGGTCGTGGGTTTT 59.021 50.000 0.00 0.00 0.00 2.43
2431 5059 1.851304 TATCGTAGGGTCGTGGGTTT 58.149 50.000 0.00 0.00 0.00 3.27
2432 5060 1.851304 TTATCGTAGGGTCGTGGGTT 58.149 50.000 0.00 0.00 0.00 4.11
2433 5061 1.851304 TTTATCGTAGGGTCGTGGGT 58.149 50.000 0.00 0.00 0.00 4.51
2434 5062 2.606308 CGATTTATCGTAGGGTCGTGGG 60.606 54.545 4.03 0.00 44.74 4.61
2435 5063 2.658285 CGATTTATCGTAGGGTCGTGG 58.342 52.381 4.03 0.00 44.74 4.94
2446 5074 9.632076 GCCACAAATAGTCGCTACGATTTATCG 62.632 44.444 10.37 10.37 42.30 2.92
2447 5075 6.615839 GCCACAAATAGTCGCTACGATTTATC 60.616 42.308 8.71 0.00 38.42 1.75
2448 5076 5.176958 GCCACAAATAGTCGCTACGATTTAT 59.823 40.000 8.71 0.00 38.42 1.40
2449 5077 4.505191 GCCACAAATAGTCGCTACGATTTA 59.495 41.667 8.71 0.00 38.42 1.40
2450 5078 3.308866 GCCACAAATAGTCGCTACGATTT 59.691 43.478 4.02 4.02 40.31 2.17
2451 5079 2.864343 GCCACAAATAGTCGCTACGATT 59.136 45.455 0.00 0.00 38.42 3.34
2452 5080 2.159156 TGCCACAAATAGTCGCTACGAT 60.159 45.455 0.00 0.00 38.42 3.73
2453 5081 1.202817 TGCCACAAATAGTCGCTACGA 59.797 47.619 0.00 0.00 35.19 3.43
2454 5082 1.635844 TGCCACAAATAGTCGCTACG 58.364 50.000 0.00 0.00 35.19 3.51
2455 5083 5.728351 TTAATGCCACAAATAGTCGCTAC 57.272 39.130 0.00 0.00 35.19 3.58
2456 5084 4.272504 GCTTAATGCCACAAATAGTCGCTA 59.727 41.667 0.00 0.00 35.19 4.26
2457 5085 3.065371 GCTTAATGCCACAAATAGTCGCT 59.935 43.478 0.00 0.00 35.19 4.93
2458 5086 3.363178 GCTTAATGCCACAAATAGTCGC 58.637 45.455 0.00 0.00 34.66 5.19
2459 5087 3.308595 TCGCTTAATGCCACAAATAGTCG 59.691 43.478 0.00 0.00 38.78 4.18
2460 5088 4.588278 GTCGCTTAATGCCACAAATAGTC 58.412 43.478 0.00 0.00 38.78 2.59
2461 5089 3.063452 CGTCGCTTAATGCCACAAATAGT 59.937 43.478 0.00 0.00 38.78 2.12
2462 5090 3.607439 CGTCGCTTAATGCCACAAATAG 58.393 45.455 0.00 0.00 38.78 1.73
2463 5091 2.223157 GCGTCGCTTAATGCCACAAATA 60.223 45.455 10.68 0.00 38.78 1.40
2464 5092 1.467374 GCGTCGCTTAATGCCACAAAT 60.467 47.619 10.68 0.00 38.78 2.32
2465 5093 0.109964 GCGTCGCTTAATGCCACAAA 60.110 50.000 10.68 0.00 38.78 2.83
2466 5094 0.953471 AGCGTCGCTTAATGCCACAA 60.953 50.000 15.47 0.00 33.89 3.33
2467 5095 1.358725 GAGCGTCGCTTAATGCCACA 61.359 55.000 22.67 0.00 39.88 4.17
2468 5096 1.348594 GAGCGTCGCTTAATGCCAC 59.651 57.895 22.67 1.47 39.88 5.01
2469 5097 1.813753 GGAGCGTCGCTTAATGCCA 60.814 57.895 22.67 0.00 39.88 4.92
2470 5098 1.766143 CTGGAGCGTCGCTTAATGCC 61.766 60.000 22.67 17.43 39.88 4.40
2471 5099 1.638467 CTGGAGCGTCGCTTAATGC 59.362 57.895 22.67 7.80 39.88 3.56
2472 5100 1.638467 GCTGGAGCGTCGCTTAATG 59.362 57.895 22.67 12.79 39.88 1.90
2473 5101 4.110493 GCTGGAGCGTCGCTTAAT 57.890 55.556 22.67 0.00 39.88 1.40
2479 5107 1.475441 GATCGAAAGCTGGAGCGTCG 61.475 60.000 16.90 16.90 46.98 5.12
2483 5111 2.864931 CGCGATCGAAAGCTGGAGC 61.865 63.158 21.57 0.00 38.64 4.70
2484 5112 2.864931 GCGCGATCGAAAGCTGGAG 61.865 63.158 21.57 0.00 38.10 3.86
2485 5113 2.885644 GCGCGATCGAAAGCTGGA 60.886 61.111 21.57 0.00 38.10 3.86
2486 5114 3.188100 TGCGCGATCGAAAGCTGG 61.188 61.111 21.57 0.00 38.10 4.85
2487 5115 2.020559 GTGCGCGATCGAAAGCTG 59.979 61.111 21.57 1.43 38.10 4.24
2488 5116 1.565156 TTTGTGCGCGATCGAAAGCT 61.565 50.000 21.57 0.00 38.10 3.74
2489 5117 1.154488 TTTGTGCGCGATCGAAAGC 60.154 52.632 21.57 20.03 38.10 3.51
2490 5118 0.110867 TGTTTGTGCGCGATCGAAAG 60.111 50.000 21.57 10.29 38.10 2.62
2491 5119 0.305009 TTGTTTGTGCGCGATCGAAA 59.695 45.000 21.57 7.08 38.10 3.46
2492 5120 0.305009 TTTGTTTGTGCGCGATCGAA 59.695 45.000 21.57 4.79 38.10 3.71
2493 5121 0.383737 GTTTGTTTGTGCGCGATCGA 60.384 50.000 21.57 0.00 38.10 3.59
2494 5122 1.643351 CGTTTGTTTGTGCGCGATCG 61.643 55.000 12.10 11.69 39.07 3.69
2495 5123 1.919239 GCGTTTGTTTGTGCGCGATC 61.919 55.000 12.10 1.33 40.46 3.69
2496 5124 2.008697 GCGTTTGTTTGTGCGCGAT 61.009 52.632 12.10 0.00 40.46 4.58
2497 5125 2.649349 GCGTTTGTTTGTGCGCGA 60.649 55.556 12.10 0.00 40.46 5.87
2500 5128 2.904549 CGCTGCGTTTGTTTGTGCG 61.905 57.895 14.93 0.00 36.19 5.34
2501 5129 2.912744 CGCTGCGTTTGTTTGTGC 59.087 55.556 14.93 0.00 0.00 4.57
2502 5130 1.871345 TGCGCTGCGTTTGTTTGTG 60.871 52.632 24.04 0.00 0.00 3.33
2503 5131 1.871789 GTGCGCTGCGTTTGTTTGT 60.872 52.632 24.04 0.00 0.00 2.83
2504 5132 0.316607 TAGTGCGCTGCGTTTGTTTG 60.317 50.000 24.04 0.00 0.00 2.93
2505 5133 0.041312 CTAGTGCGCTGCGTTTGTTT 60.041 50.000 24.04 6.41 0.00 2.83
2506 5134 1.569493 CTAGTGCGCTGCGTTTGTT 59.431 52.632 24.04 7.77 0.00 2.83
2507 5135 2.954753 GCTAGTGCGCTGCGTTTGT 61.955 57.895 24.04 8.58 0.00 2.83
2508 5136 2.202222 GCTAGTGCGCTGCGTTTG 60.202 61.111 24.04 11.32 0.00 2.93
2509 5137 3.423154 GGCTAGTGCGCTGCGTTT 61.423 61.111 24.04 11.61 40.82 3.60
2510 5138 4.680237 TGGCTAGTGCGCTGCGTT 62.680 61.111 24.04 11.97 40.82 4.84
2513 5141 3.494336 CAGTGGCTAGTGCGCTGC 61.494 66.667 10.80 11.34 40.82 5.25
2514 5142 3.494336 GCAGTGGCTAGTGCGCTG 61.494 66.667 14.54 5.14 42.84 5.18
2519 5147 3.121030 GTGGCGCAGTGGCTAGTG 61.121 66.667 10.83 0.00 45.14 2.74
2520 5148 4.742201 CGTGGCGCAGTGGCTAGT 62.742 66.667 10.83 0.00 45.14 2.57
2531 5159 4.383602 CGAACCTTTGGCGTGGCG 62.384 66.667 0.00 0.00 0.00 5.69
2532 5160 3.284449 ACGAACCTTTGGCGTGGC 61.284 61.111 0.00 0.00 36.83 5.01
2535 5163 1.001633 ACTATCACGAACCTTTGGCGT 59.998 47.619 0.00 0.00 39.04 5.68
2536 5164 1.393539 CACTATCACGAACCTTTGGCG 59.606 52.381 0.00 0.00 0.00 5.69
2537 5165 1.737793 CCACTATCACGAACCTTTGGC 59.262 52.381 0.00 0.00 0.00 4.52
2538 5166 1.737793 GCCACTATCACGAACCTTTGG 59.262 52.381 0.00 0.00 0.00 3.28
2539 5167 2.699954 AGCCACTATCACGAACCTTTG 58.300 47.619 0.00 0.00 0.00 2.77
2540 5168 3.118738 CCTAGCCACTATCACGAACCTTT 60.119 47.826 0.00 0.00 0.00 3.11
2541 5169 2.431057 CCTAGCCACTATCACGAACCTT 59.569 50.000 0.00 0.00 0.00 3.50
2542 5170 2.032620 CCTAGCCACTATCACGAACCT 58.967 52.381 0.00 0.00 0.00 3.50
2543 5171 2.029623 TCCTAGCCACTATCACGAACC 58.970 52.381 0.00 0.00 0.00 3.62
2544 5172 2.426024 TGTCCTAGCCACTATCACGAAC 59.574 50.000 0.00 0.00 0.00 3.95
2545 5173 2.426024 GTGTCCTAGCCACTATCACGAA 59.574 50.000 0.00 0.00 0.00 3.85
2546 5174 2.022195 GTGTCCTAGCCACTATCACGA 58.978 52.381 0.00 0.00 0.00 4.35
2547 5175 1.268589 CGTGTCCTAGCCACTATCACG 60.269 57.143 8.56 0.00 40.33 4.35
2548 5176 2.022195 TCGTGTCCTAGCCACTATCAC 58.978 52.381 8.56 0.00 0.00 3.06
2549 5177 2.022195 GTCGTGTCCTAGCCACTATCA 58.978 52.381 8.56 0.00 0.00 2.15
2550 5178 1.337387 GGTCGTGTCCTAGCCACTATC 59.663 57.143 8.56 0.00 0.00 2.08
2551 5179 1.400737 GGTCGTGTCCTAGCCACTAT 58.599 55.000 8.56 0.00 0.00 2.12
2552 5180 0.682209 GGGTCGTGTCCTAGCCACTA 60.682 60.000 8.56 0.00 33.37 2.74
2553 5181 1.982938 GGGTCGTGTCCTAGCCACT 60.983 63.158 8.56 0.00 33.37 4.00
2554 5182 2.280552 TGGGTCGTGTCCTAGCCAC 61.281 63.158 0.00 1.71 38.31 5.01
2555 5183 2.118732 TGGGTCGTGTCCTAGCCA 59.881 61.111 0.00 0.00 40.82 4.75
2556 5184 1.542187 AAGTGGGTCGTGTCCTAGCC 61.542 60.000 0.00 0.00 0.00 3.93
2557 5185 0.389948 CAAGTGGGTCGTGTCCTAGC 60.390 60.000 0.00 0.00 0.00 3.42
2558 5186 1.254026 TCAAGTGGGTCGTGTCCTAG 58.746 55.000 0.00 0.00 0.00 3.02
2559 5187 1.616865 CTTCAAGTGGGTCGTGTCCTA 59.383 52.381 0.00 0.00 0.00 2.94
2560 5188 0.393077 CTTCAAGTGGGTCGTGTCCT 59.607 55.000 0.00 0.00 0.00 3.85
2561 5189 1.228657 GCTTCAAGTGGGTCGTGTCC 61.229 60.000 0.00 0.00 0.00 4.02
2562 5190 0.531974 TGCTTCAAGTGGGTCGTGTC 60.532 55.000 0.00 0.00 0.00 3.67
2563 5191 0.814010 GTGCTTCAAGTGGGTCGTGT 60.814 55.000 0.00 0.00 0.00 4.49
2564 5192 0.813610 TGTGCTTCAAGTGGGTCGTG 60.814 55.000 0.00 0.00 0.00 4.35
2565 5193 0.107410 TTGTGCTTCAAGTGGGTCGT 60.107 50.000 0.00 0.00 0.00 4.34
2566 5194 0.307760 GTTGTGCTTCAAGTGGGTCG 59.692 55.000 0.00 0.00 36.66 4.79
2567 5195 0.307760 CGTTGTGCTTCAAGTGGGTC 59.692 55.000 0.00 0.00 36.66 4.46
2568 5196 1.724582 GCGTTGTGCTTCAAGTGGGT 61.725 55.000 0.00 0.00 41.73 4.51
2569 5197 1.008538 GCGTTGTGCTTCAAGTGGG 60.009 57.895 0.00 0.00 41.73 4.61
2570 5198 1.369209 CGCGTTGTGCTTCAAGTGG 60.369 57.895 0.00 0.00 43.27 4.00
2571 5199 2.005537 GCGCGTTGTGCTTCAAGTG 61.006 57.895 8.43 0.00 43.27 3.16
2572 5200 2.327940 GCGCGTTGTGCTTCAAGT 59.672 55.556 8.43 0.00 43.27 3.16
2573 5201 2.427410 GGCGCGTTGTGCTTCAAG 60.427 61.111 8.43 0.00 43.27 3.02
2574 5202 4.306471 CGGCGCGTTGTGCTTCAA 62.306 61.111 8.43 0.00 43.27 2.69
2579 5207 4.916273 AAAACCGGCGCGTTGTGC 62.916 61.111 8.43 0.00 41.47 4.57
2580 5208 2.724358 GAAAACCGGCGCGTTGTG 60.724 61.111 8.43 0.00 0.00 3.33
2581 5209 2.888998 GAGAAAACCGGCGCGTTGT 61.889 57.895 8.43 8.71 0.00 3.32
2582 5210 2.127383 GAGAAAACCGGCGCGTTG 60.127 61.111 8.43 0.00 0.00 4.10
2583 5211 3.351416 GGAGAAAACCGGCGCGTT 61.351 61.111 8.43 4.46 0.00 4.84
2584 5212 4.309950 AGGAGAAAACCGGCGCGT 62.310 61.111 8.43 0.00 34.73 6.01
2585 5213 3.788766 CAGGAGAAAACCGGCGCG 61.789 66.667 0.00 0.00 34.73 6.86
2586 5214 2.668550 ACAGGAGAAAACCGGCGC 60.669 61.111 0.00 0.00 34.73 6.53
2587 5215 0.602905 AAGACAGGAGAAAACCGGCG 60.603 55.000 0.00 0.00 34.73 6.46
2588 5216 1.605753 AAAGACAGGAGAAAACCGGC 58.394 50.000 0.00 0.00 34.73 6.13
2635 5263 9.824534 GAAGAAACAAAAGCAAAGAAATGAAAA 57.175 25.926 0.00 0.00 0.00 2.29
2636 5264 8.997323 TGAAGAAACAAAAGCAAAGAAATGAAA 58.003 25.926 0.00 0.00 0.00 2.69
2637 5265 8.545229 TGAAGAAACAAAAGCAAAGAAATGAA 57.455 26.923 0.00 0.00 0.00 2.57
2638 5266 8.721019 ATGAAGAAACAAAAGCAAAGAAATGA 57.279 26.923 0.00 0.00 0.00 2.57
2639 5267 9.777575 AAATGAAGAAACAAAAGCAAAGAAATG 57.222 25.926 0.00 0.00 0.00 2.32
2641 5269 9.824534 GAAAATGAAGAAACAAAAGCAAAGAAA 57.175 25.926 0.00 0.00 0.00 2.52
2642 5270 9.218440 AGAAAATGAAGAAACAAAAGCAAAGAA 57.782 25.926 0.00 0.00 0.00 2.52
2643 5271 8.776376 AGAAAATGAAGAAACAAAAGCAAAGA 57.224 26.923 0.00 0.00 0.00 2.52
2644 5272 9.269415 CAAGAAAATGAAGAAACAAAAGCAAAG 57.731 29.630 0.00 0.00 0.00 2.77
2645 5273 8.782144 ACAAGAAAATGAAGAAACAAAAGCAAA 58.218 25.926 0.00 0.00 0.00 3.68
2646 5274 8.321650 ACAAGAAAATGAAGAAACAAAAGCAA 57.678 26.923 0.00 0.00 0.00 3.91
2647 5275 7.903995 ACAAGAAAATGAAGAAACAAAAGCA 57.096 28.000 0.00 0.00 0.00 3.91
2648 5276 8.659491 AGAACAAGAAAATGAAGAAACAAAAGC 58.341 29.630 0.00 0.00 0.00 3.51
2651 5279 8.859156 CGAAGAACAAGAAAATGAAGAAACAAA 58.141 29.630 0.00 0.00 0.00 2.83
2652 5280 8.026607 ACGAAGAACAAGAAAATGAAGAAACAA 58.973 29.630 0.00 0.00 0.00 2.83
2653 5281 7.535139 ACGAAGAACAAGAAAATGAAGAAACA 58.465 30.769 0.00 0.00 0.00 2.83
2654 5282 7.971004 ACGAAGAACAAGAAAATGAAGAAAC 57.029 32.000 0.00 0.00 0.00 2.78
2655 5283 8.980143 AAACGAAGAACAAGAAAATGAAGAAA 57.020 26.923 0.00 0.00 0.00 2.52
2656 5284 8.980143 AAAACGAAGAACAAGAAAATGAAGAA 57.020 26.923 0.00 0.00 0.00 2.52
2657 5285 8.980143 AAAAACGAAGAACAAGAAAATGAAGA 57.020 26.923 0.00 0.00 0.00 2.87
2658 5286 9.076596 AGAAAAACGAAGAACAAGAAAATGAAG 57.923 29.630 0.00 0.00 0.00 3.02
2659 5287 8.980143 AGAAAAACGAAGAACAAGAAAATGAA 57.020 26.923 0.00 0.00 0.00 2.57
2660 5288 8.980143 AAGAAAAACGAAGAACAAGAAAATGA 57.020 26.923 0.00 0.00 0.00 2.57
2661 5289 8.859156 TGAAGAAAAACGAAGAACAAGAAAATG 58.141 29.630 0.00 0.00 0.00 2.32
2662 5290 8.980143 TGAAGAAAAACGAAGAACAAGAAAAT 57.020 26.923 0.00 0.00 0.00 1.82
2663 5291 8.980143 ATGAAGAAAAACGAAGAACAAGAAAA 57.020 26.923 0.00 0.00 0.00 2.29
2664 5292 8.458843 AGATGAAGAAAAACGAAGAACAAGAAA 58.541 29.630 0.00 0.00 0.00 2.52
2665 5293 7.985476 AGATGAAGAAAAACGAAGAACAAGAA 58.015 30.769 0.00 0.00 0.00 2.52
2666 5294 7.553881 AGATGAAGAAAAACGAAGAACAAGA 57.446 32.000 0.00 0.00 0.00 3.02
2667 5295 8.620533 AAAGATGAAGAAAAACGAAGAACAAG 57.379 30.769 0.00 0.00 0.00 3.16
2668 5296 8.980143 AAAAGATGAAGAAAAACGAAGAACAA 57.020 26.923 0.00 0.00 0.00 2.83
2669 5297 8.240682 TGAAAAGATGAAGAAAAACGAAGAACA 58.759 29.630 0.00 0.00 0.00 3.18
2670 5298 8.614994 TGAAAAGATGAAGAAAAACGAAGAAC 57.385 30.769 0.00 0.00 0.00 3.01
2671 5299 9.801873 AATGAAAAGATGAAGAAAAACGAAGAA 57.198 25.926 0.00 0.00 0.00 2.52
2675 5303 9.840427 GGATAATGAAAAGATGAAGAAAAACGA 57.160 29.630 0.00 0.00 0.00 3.85
2676 5304 8.788813 CGGATAATGAAAAGATGAAGAAAAACG 58.211 33.333 0.00 0.00 0.00 3.60
2677 5305 9.840427 TCGGATAATGAAAAGATGAAGAAAAAC 57.160 29.630 0.00 0.00 0.00 2.43
2679 5307 9.840427 GTTCGGATAATGAAAAGATGAAGAAAA 57.160 29.630 0.00 0.00 0.00 2.29
2680 5308 8.175069 CGTTCGGATAATGAAAAGATGAAGAAA 58.825 33.333 0.00 0.00 0.00 2.52
2681 5309 7.676338 GCGTTCGGATAATGAAAAGATGAAGAA 60.676 37.037 0.00 0.00 0.00 2.52
2682 5310 6.238103 GCGTTCGGATAATGAAAAGATGAAGA 60.238 38.462 0.00 0.00 0.00 2.87
2683 5311 5.904080 GCGTTCGGATAATGAAAAGATGAAG 59.096 40.000 0.00 0.00 0.00 3.02
2684 5312 5.584649 AGCGTTCGGATAATGAAAAGATGAA 59.415 36.000 0.00 0.00 0.00 2.57
2685 5313 5.116180 AGCGTTCGGATAATGAAAAGATGA 58.884 37.500 0.00 0.00 0.00 2.92
2686 5314 5.409643 AGCGTTCGGATAATGAAAAGATG 57.590 39.130 0.00 0.00 0.00 2.90
2687 5315 7.730364 ATAAGCGTTCGGATAATGAAAAGAT 57.270 32.000 0.00 0.00 0.00 2.40
2688 5316 7.516155 CGAATAAGCGTTCGGATAATGAAAAGA 60.516 37.037 12.18 0.00 45.28 2.52
2689 5317 6.570058 CGAATAAGCGTTCGGATAATGAAAAG 59.430 38.462 12.18 0.00 45.28 2.27
2690 5318 6.415702 CGAATAAGCGTTCGGATAATGAAAA 58.584 36.000 12.18 0.00 45.28 2.29
2691 5319 5.969741 CGAATAAGCGTTCGGATAATGAAA 58.030 37.500 12.18 0.00 45.28 2.69
2692 5320 5.570262 CGAATAAGCGTTCGGATAATGAA 57.430 39.130 12.18 0.00 45.28 2.57
2702 5330 5.013861 TGAAAAGTGTCGAATAAGCGTTC 57.986 39.130 0.00 0.00 0.00 3.95
2703 5331 5.412526 TTGAAAAGTGTCGAATAAGCGTT 57.587 34.783 0.00 0.00 0.00 4.84
2704 5332 5.412526 TTTGAAAAGTGTCGAATAAGCGT 57.587 34.783 0.00 0.00 0.00 5.07
2705 5333 7.234384 AGTATTTGAAAAGTGTCGAATAAGCG 58.766 34.615 0.00 0.00 36.21 4.68
2706 5334 8.840867 CAAGTATTTGAAAAGTGTCGAATAAGC 58.159 33.333 0.00 0.00 36.21 3.09
2707 5335 9.878599 ACAAGTATTTGAAAAGTGTCGAATAAG 57.121 29.630 4.81 0.00 36.21 1.73
2710 5338 9.581099 AAAACAAGTATTTGAAAAGTGTCGAAT 57.419 25.926 4.81 0.00 37.73 3.34
2711 5339 8.973835 AAAACAAGTATTTGAAAAGTGTCGAA 57.026 26.923 4.81 0.00 37.73 3.71
2712 5340 9.493206 GTAAAACAAGTATTTGAAAAGTGTCGA 57.507 29.630 4.81 0.00 37.73 4.20
2713 5341 9.279904 TGTAAAACAAGTATTTGAAAAGTGTCG 57.720 29.630 4.81 0.00 37.73 4.35
2734 5362 9.915629 AGTGTTGAACAAGTGTTAAAATGTAAA 57.084 25.926 0.00 0.00 38.56 2.01
2735 5363 9.915629 AAGTGTTGAACAAGTGTTAAAATGTAA 57.084 25.926 0.00 0.00 38.56 2.41
2736 5364 9.915629 AAAGTGTTGAACAAGTGTTAAAATGTA 57.084 25.926 0.00 0.00 38.56 2.29
2737 5365 8.825667 AAAGTGTTGAACAAGTGTTAAAATGT 57.174 26.923 0.00 0.00 38.56 2.71
2738 5366 9.739786 GAAAAGTGTTGAACAAGTGTTAAAATG 57.260 29.630 0.00 0.00 38.56 2.32
2739 5367 9.482627 TGAAAAGTGTTGAACAAGTGTTAAAAT 57.517 25.926 0.00 0.00 38.56 1.82
2740 5368 8.873215 TGAAAAGTGTTGAACAAGTGTTAAAA 57.127 26.923 0.00 0.00 38.56 1.52
2741 5369 8.873215 TTGAAAAGTGTTGAACAAGTGTTAAA 57.127 26.923 0.00 0.00 38.56 1.52
2742 5370 8.873215 TTTGAAAAGTGTTGAACAAGTGTTAA 57.127 26.923 0.00 0.00 38.56 2.01
2744 5372 7.961325 ATTTGAAAAGTGTTGAACAAGTGTT 57.039 28.000 0.00 0.00 41.64 3.32
2745 5373 8.303876 AGTATTTGAAAAGTGTTGAACAAGTGT 58.696 29.630 0.00 0.00 0.00 3.55
2746 5374 8.687824 AGTATTTGAAAAGTGTTGAACAAGTG 57.312 30.769 0.00 0.00 0.00 3.16
2747 5375 7.696453 CGAGTATTTGAAAAGTGTTGAACAAGT 59.304 33.333 0.00 0.00 0.00 3.16
2748 5376 7.696453 ACGAGTATTTGAAAAGTGTTGAACAAG 59.304 33.333 0.00 0.00 0.00 3.16
2749 5377 7.531716 ACGAGTATTTGAAAAGTGTTGAACAA 58.468 30.769 0.00 0.00 0.00 2.83
2750 5378 7.079182 ACGAGTATTTGAAAAGTGTTGAACA 57.921 32.000 0.00 0.00 0.00 3.18
2751 5379 7.694784 TGAACGAGTATTTGAAAAGTGTTGAAC 59.305 33.333 0.00 0.00 0.00 3.18
2752 5380 7.753659 TGAACGAGTATTTGAAAAGTGTTGAA 58.246 30.769 0.00 0.00 0.00 2.69
2753 5381 7.310072 TGAACGAGTATTTGAAAAGTGTTGA 57.690 32.000 0.00 0.00 0.00 3.18
2754 5382 7.483375 TGTTGAACGAGTATTTGAAAAGTGTTG 59.517 33.333 0.00 0.00 0.00 3.33
2755 5383 7.531716 TGTTGAACGAGTATTTGAAAAGTGTT 58.468 30.769 0.00 0.00 0.00 3.32
2756 5384 7.079182 TGTTGAACGAGTATTTGAAAAGTGT 57.921 32.000 0.00 0.00 0.00 3.55
2757 5385 8.560576 AATGTTGAACGAGTATTTGAAAAGTG 57.439 30.769 0.00 0.00 0.00 3.16
2758 5386 9.581099 AAAATGTTGAACGAGTATTTGAAAAGT 57.419 25.926 0.00 0.00 0.00 2.66
2789 5417 9.890352 CCAAATGAAACAAGAGAAAAACAAAAA 57.110 25.926 0.00 0.00 0.00 1.94
2790 5418 9.061435 ACCAAATGAAACAAGAGAAAAACAAAA 57.939 25.926 0.00 0.00 0.00 2.44
2791 5419 8.614469 ACCAAATGAAACAAGAGAAAAACAAA 57.386 26.923 0.00 0.00 0.00 2.83
2792 5420 8.614469 AACCAAATGAAACAAGAGAAAAACAA 57.386 26.923 0.00 0.00 0.00 2.83
2793 5421 8.614469 AAACCAAATGAAACAAGAGAAAAACA 57.386 26.923 0.00 0.00 0.00 2.83
2794 5422 9.541724 GAAAACCAAATGAAACAAGAGAAAAAC 57.458 29.630 0.00 0.00 0.00 2.43
2795 5423 9.500785 AGAAAACCAAATGAAACAAGAGAAAAA 57.499 25.926 0.00 0.00 0.00 1.94
2796 5424 9.500785 AAGAAAACCAAATGAAACAAGAGAAAA 57.499 25.926 0.00 0.00 0.00 2.29
2797 5425 9.150348 GAAGAAAACCAAATGAAACAAGAGAAA 57.850 29.630 0.00 0.00 0.00 2.52
2798 5426 8.531146 AGAAGAAAACCAAATGAAACAAGAGAA 58.469 29.630 0.00 0.00 0.00 2.87
2799 5427 8.066612 AGAAGAAAACCAAATGAAACAAGAGA 57.933 30.769 0.00 0.00 0.00 3.10
2800 5428 8.193438 AGAGAAGAAAACCAAATGAAACAAGAG 58.807 33.333 0.00 0.00 0.00 2.85
2801 5429 8.066612 AGAGAAGAAAACCAAATGAAACAAGA 57.933 30.769 0.00 0.00 0.00 3.02
2802 5430 8.707938 AAGAGAAGAAAACCAAATGAAACAAG 57.292 30.769 0.00 0.00 0.00 3.16
2803 5431 9.500785 AAAAGAGAAGAAAACCAAATGAAACAA 57.499 25.926 0.00 0.00 0.00 2.83
2804 5432 9.500785 AAAAAGAGAAGAAAACCAAATGAAACA 57.499 25.926 0.00 0.00 0.00 2.83



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.