Multiple sequence alignment - TraesCS3A01G163900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G163900 chr3A 100.000 3712 0 0 1 3712 168590190 168593901 0.000000e+00 6855.0
1 TraesCS3A01G163900 chr3A 100.000 133 0 0 3955 4087 168594144 168594276 3.160000e-61 246.0
2 TraesCS3A01G163900 chr3B 92.942 2678 106 36 701 3339 236198042 236195409 0.000000e+00 3821.0
3 TraesCS3A01G163900 chr3B 87.855 634 61 5 8 626 193403629 193404261 0.000000e+00 730.0
4 TraesCS3A01G163900 chr3D 91.709 2750 134 42 653 3364 159572962 159570269 0.000000e+00 3729.0
5 TraesCS3A01G163900 chr3D 90.317 630 51 6 1 622 66733267 66732640 0.000000e+00 817.0
6 TraesCS3A01G163900 chr3D 88.854 637 59 4 1 626 556042505 556043140 0.000000e+00 773.0
7 TraesCS3A01G163900 chr3D 83.871 248 13 12 3386 3633 159475886 159475666 1.150000e-50 211.0
8 TraesCS3A01G163900 chr3D 98.413 63 1 0 3650 3712 159475679 159475617 1.200000e-20 111.0
9 TraesCS3A01G163900 chr3D 81.905 105 13 2 3442 3546 67686917 67687015 2.620000e-12 84.2
10 TraesCS3A01G163900 chr7D 90.575 626 59 0 1 626 30128027 30127402 0.000000e+00 830.0
11 TraesCS3A01G163900 chr2D 92.101 557 42 1 1 557 449707756 449708310 0.000000e+00 784.0
12 TraesCS3A01G163900 chr5A 91.327 565 49 0 1605 2169 538102970 538102406 0.000000e+00 773.0
13 TraesCS3A01G163900 chr5A 83.104 799 90 30 2273 3062 538102410 538101648 0.000000e+00 686.0
14 TraesCS3A01G163900 chr5A 88.738 515 38 13 1010 1515 538103558 538103055 2.700000e-171 612.0
15 TraesCS3A01G163900 chr5D 88.456 641 59 5 1 626 459932012 459931372 0.000000e+00 760.0
16 TraesCS3A01G163900 chr5D 90.442 565 54 0 1605 2169 424315264 424314700 0.000000e+00 745.0
17 TraesCS3A01G163900 chr5D 83.724 811 93 27 2273 3062 424314704 424313912 0.000000e+00 730.0
18 TraesCS3A01G163900 chr5D 89.320 515 35 12 1010 1515 424315850 424315347 2.680000e-176 628.0
19 TraesCS3A01G163900 chr5B 90.231 563 55 0 1607 2169 513377539 513376977 0.000000e+00 736.0
20 TraesCS3A01G163900 chr5B 82.797 808 105 24 2273 3063 513376981 513376191 0.000000e+00 691.0
21 TraesCS3A01G163900 chr5B 88.932 515 37 13 1010 1515 513378136 513377633 5.800000e-173 617.0
22 TraesCS3A01G163900 chr7A 87.461 638 67 7 1 626 447325279 447324643 0.000000e+00 723.0
23 TraesCS3A01G163900 chr6A 86.615 650 68 8 1 637 571903322 571902679 0.000000e+00 701.0
24 TraesCS3A01G163900 chr4A 89.474 551 54 4 1 550 693330762 693330215 0.000000e+00 693.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G163900 chr3A 168590190 168594276 4086 False 3550.500000 6855 100.000000 1 4087 2 chr3A.!!$F1 4086
1 TraesCS3A01G163900 chr3B 236195409 236198042 2633 True 3821.000000 3821 92.942000 701 3339 1 chr3B.!!$R1 2638
2 TraesCS3A01G163900 chr3B 193403629 193404261 632 False 730.000000 730 87.855000 8 626 1 chr3B.!!$F1 618
3 TraesCS3A01G163900 chr3D 159570269 159572962 2693 True 3729.000000 3729 91.709000 653 3364 1 chr3D.!!$R2 2711
4 TraesCS3A01G163900 chr3D 66732640 66733267 627 True 817.000000 817 90.317000 1 622 1 chr3D.!!$R1 621
5 TraesCS3A01G163900 chr3D 556042505 556043140 635 False 773.000000 773 88.854000 1 626 1 chr3D.!!$F2 625
6 TraesCS3A01G163900 chr7D 30127402 30128027 625 True 830.000000 830 90.575000 1 626 1 chr7D.!!$R1 625
7 TraesCS3A01G163900 chr2D 449707756 449708310 554 False 784.000000 784 92.101000 1 557 1 chr2D.!!$F1 556
8 TraesCS3A01G163900 chr5A 538101648 538103558 1910 True 690.333333 773 87.723000 1010 3062 3 chr5A.!!$R1 2052
9 TraesCS3A01G163900 chr5D 459931372 459932012 640 True 760.000000 760 88.456000 1 626 1 chr5D.!!$R1 625
10 TraesCS3A01G163900 chr5D 424313912 424315850 1938 True 701.000000 745 87.828667 1010 3062 3 chr5D.!!$R2 2052
11 TraesCS3A01G163900 chr5B 513376191 513378136 1945 True 681.333333 736 87.320000 1010 3063 3 chr5B.!!$R1 2053
12 TraesCS3A01G163900 chr7A 447324643 447325279 636 True 723.000000 723 87.461000 1 626 1 chr7A.!!$R1 625
13 TraesCS3A01G163900 chr6A 571902679 571903322 643 True 701.000000 701 86.615000 1 637 1 chr6A.!!$R1 636
14 TraesCS3A01G163900 chr4A 693330215 693330762 547 True 693.000000 693 89.474000 1 550 1 chr4A.!!$R1 549

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
535 543 0.319555 ATTAGATATGCCGCGCGTGT 60.320 50.0 29.95 16.15 0.0 4.49 F
659 679 0.324943 ATGTCGGCTTGCAGTTAGGT 59.675 50.0 0.00 0.00 0.0 3.08 F
1960 2041 0.326618 CTGGGGGAGGTACATGGAGT 60.327 60.0 0.00 0.00 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2073 2154 0.395173 GGGAGAAGGAGTCGCTCTCT 60.395 60.0 15.8 3.46 42.4 3.10 R
2293 2379 0.850100 TTTGCCAGGTCCTTCTCCAA 59.150 50.0 0.0 0.00 0.0 3.53 R
3151 3290 0.034059 AGAGTTCGCTTGGACCACAG 59.966 55.0 0.0 0.00 0.0 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 95 3.715834 CAAGATCCTCCTCCTCTTCCATT 59.284 47.826 0.00 0.00 0.00 3.16
205 213 8.697846 AATTCATGAAGTTTGAGCAATACATG 57.302 30.769 14.54 0.00 36.33 3.21
236 244 1.062880 GTTTTGTCGAACACCTTGCGA 59.937 47.619 0.00 0.00 0.00 5.10
322 330 1.209990 GTGACTAGAGGGAGACGGAGA 59.790 57.143 0.00 0.00 0.00 3.71
424 432 1.179174 CCGCGACTGGATGGGATAGA 61.179 60.000 8.23 0.00 0.00 1.98
438 446 1.069204 GGATAGATGGAGTTGCGAGCA 59.931 52.381 0.00 0.00 0.00 4.26
443 451 3.044305 GGAGTTGCGAGCAAGCGT 61.044 61.111 11.09 0.00 40.67 5.07
445 453 1.279840 GAGTTGCGAGCAAGCGTTT 59.720 52.632 11.09 0.00 40.67 3.60
533 541 1.068474 GAATTAGATATGCCGCGCGT 58.932 50.000 29.95 13.36 0.00 6.01
535 543 0.319555 ATTAGATATGCCGCGCGTGT 60.320 50.000 29.95 16.15 0.00 4.49
550 558 2.139336 CGTGTGATTTTTACGCCTCG 57.861 50.000 0.00 0.00 0.00 4.63
565 584 2.678934 TCGCCTGGAACGGTAGCT 60.679 61.111 0.00 0.00 0.00 3.32
612 632 1.690352 AGGGTGCTTATATAACGCGGT 59.310 47.619 12.47 6.42 32.48 5.68
622 642 1.435577 ATAACGCGGTTGTTGGAGAC 58.564 50.000 12.47 0.00 33.32 3.36
628 648 0.999406 CGGTTGTTGGAGACGCTATG 59.001 55.000 0.00 0.00 0.00 2.23
630 650 2.271800 GGTTGTTGGAGACGCTATGAG 58.728 52.381 0.00 0.00 0.00 2.90
632 652 3.585862 GTTGTTGGAGACGCTATGAGAA 58.414 45.455 0.00 0.00 0.00 2.87
635 655 3.994392 TGTTGGAGACGCTATGAGAAAAC 59.006 43.478 0.00 0.00 0.00 2.43
636 656 3.953712 TGGAGACGCTATGAGAAAACA 57.046 42.857 0.00 0.00 0.00 2.83
637 657 3.849911 TGGAGACGCTATGAGAAAACAG 58.150 45.455 0.00 0.00 0.00 3.16
638 658 3.509967 TGGAGACGCTATGAGAAAACAGA 59.490 43.478 0.00 0.00 0.00 3.41
639 659 3.860536 GGAGACGCTATGAGAAAACAGAC 59.139 47.826 0.00 0.00 0.00 3.51
640 660 4.486090 GAGACGCTATGAGAAAACAGACA 58.514 43.478 0.00 0.00 0.00 3.41
641 661 5.078411 AGACGCTATGAGAAAACAGACAT 57.922 39.130 0.00 0.00 0.00 3.06
642 662 4.867047 AGACGCTATGAGAAAACAGACATG 59.133 41.667 0.00 0.00 0.00 3.21
643 663 4.569943 ACGCTATGAGAAAACAGACATGT 58.430 39.130 0.00 0.00 43.15 3.21
644 664 4.627467 ACGCTATGAGAAAACAGACATGTC 59.373 41.667 18.47 18.47 39.29 3.06
645 665 4.259570 CGCTATGAGAAAACAGACATGTCG 60.260 45.833 19.85 16.37 39.29 4.35
646 666 4.033358 GCTATGAGAAAACAGACATGTCGG 59.967 45.833 22.31 22.31 39.29 4.79
647 667 2.143122 TGAGAAAACAGACATGTCGGC 58.857 47.619 23.58 9.17 39.29 5.54
648 668 2.224281 TGAGAAAACAGACATGTCGGCT 60.224 45.455 23.58 13.49 39.29 5.52
649 669 2.808543 GAGAAAACAGACATGTCGGCTT 59.191 45.455 23.58 16.11 39.29 4.35
650 670 2.549754 AGAAAACAGACATGTCGGCTTG 59.450 45.455 23.58 16.73 39.29 4.01
651 671 0.593128 AAACAGACATGTCGGCTTGC 59.407 50.000 23.58 0.00 39.29 4.01
659 679 0.324943 ATGTCGGCTTGCAGTTAGGT 59.675 50.000 0.00 0.00 0.00 3.08
706 726 2.606519 TTCTGACGGAGGTGGGGG 60.607 66.667 0.00 0.00 0.00 5.40
835 855 1.089920 CCGAGTTGCCAATTCCAGAG 58.910 55.000 0.00 0.00 0.00 3.35
896 916 6.013379 TCCTTCTCTGCTCGATTCCTATAAT 58.987 40.000 0.00 0.00 0.00 1.28
901 921 8.594881 TCTCTGCTCGATTCCTATAATTTTTC 57.405 34.615 0.00 0.00 0.00 2.29
903 923 6.710744 TCTGCTCGATTCCTATAATTTTTCCC 59.289 38.462 0.00 0.00 0.00 3.97
904 924 6.361433 TGCTCGATTCCTATAATTTTTCCCA 58.639 36.000 0.00 0.00 0.00 4.37
905 925 6.262273 TGCTCGATTCCTATAATTTTTCCCAC 59.738 38.462 0.00 0.00 0.00 4.61
958 1000 0.739112 CCTCGCACTGCTCTCCTTTC 60.739 60.000 0.00 0.00 0.00 2.62
1003 1045 1.977594 GCGGCACCAAACGACTATGG 61.978 60.000 0.00 0.00 42.60 2.74
1008 1050 2.944094 GCACCAAACGACTATGGGGATT 60.944 50.000 0.00 0.00 43.06 3.01
1270 1321 5.938125 GGTAGTTGAGCTAATTTCACTGGAA 59.062 40.000 0.00 0.00 0.00 3.53
1905 1986 2.027625 CTCGTTCGCCAAGTCCACC 61.028 63.158 0.00 0.00 0.00 4.61
1960 2041 0.326618 CTGGGGGAGGTACATGGAGT 60.327 60.000 0.00 0.00 0.00 3.85
1973 2054 1.919956 ATGGAGTCCGTGACGTCGAC 61.920 60.000 11.62 12.14 37.67 4.20
2072 2153 2.662527 GTTCGCGTTCCCGTCCAA 60.663 61.111 5.77 0.00 36.15 3.53
2073 2154 2.108566 TTCGCGTTCCCGTCCAAA 59.891 55.556 5.77 0.00 36.15 3.28
2250 2336 2.092429 AGCTGAAACTTGGTGGACTGAA 60.092 45.455 0.00 0.00 0.00 3.02
2277 2363 6.154203 TGTGCACAACAAATAAATTCAGGA 57.846 33.333 19.28 0.00 35.24 3.86
2293 2379 2.106566 CAGGAGAGCAGTACAGATGGT 58.893 52.381 0.00 0.00 0.00 3.55
2454 2540 1.432251 CTACGGCCTCGACATCGTT 59.568 57.895 0.00 0.00 40.80 3.85
2474 2560 3.351794 TTTCACCGGCCATGTATGTAA 57.648 42.857 0.00 0.00 0.00 2.41
2496 2584 3.231965 CGTAACACCGTCTGACTTACAG 58.768 50.000 14.25 0.00 46.97 2.74
2498 2586 4.083855 CGTAACACCGTCTGACTTACAGTA 60.084 45.833 14.25 0.00 45.86 2.74
2499 2587 3.911661 ACACCGTCTGACTTACAGTAC 57.088 47.619 6.21 0.00 45.86 2.73
2515 2603 4.215908 ACAGTACCTCTGAAGTCTGAACA 58.784 43.478 10.68 0.00 46.27 3.18
2760 2868 0.599204 GCCTTCAACTTCACGTCCGA 60.599 55.000 0.00 0.00 0.00 4.55
2764 2872 1.666872 CAACTTCACGTCCGACCCC 60.667 63.158 0.00 0.00 0.00 4.95
2869 2979 1.271054 ACTGCTGCTCCGTGAAGAAAT 60.271 47.619 0.00 0.00 0.00 2.17
2871 2981 2.346803 TGCTGCTCCGTGAAGAAATAC 58.653 47.619 0.00 0.00 0.00 1.89
2872 2982 1.666189 GCTGCTCCGTGAAGAAATACC 59.334 52.381 0.00 0.00 0.00 2.73
2875 2985 2.194271 GCTCCGTGAAGAAATACCGAG 58.806 52.381 0.00 0.00 0.00 4.63
2876 2986 2.159282 GCTCCGTGAAGAAATACCGAGA 60.159 50.000 0.00 0.00 0.00 4.04
2878 2988 3.087031 TCCGTGAAGAAATACCGAGAGT 58.913 45.455 0.00 0.00 0.00 3.24
2890 3003 1.004979 ACCGAGAGTAGCTTCTGACCT 59.995 52.381 0.00 0.00 0.00 3.85
2891 3004 2.096248 CCGAGAGTAGCTTCTGACCTT 58.904 52.381 0.00 0.00 0.00 3.50
2892 3005 2.159310 CCGAGAGTAGCTTCTGACCTTG 60.159 54.545 0.00 0.00 0.00 3.61
2911 3024 9.856162 TGACCTTGTAGATACATACTGTACATA 57.144 33.333 0.00 0.00 35.42 2.29
2913 3026 9.863650 ACCTTGTAGATACATACTGTACATAGT 57.136 33.333 0.00 0.00 35.42 2.12
2917 3030 9.074576 TGTAGATACATACTGTACATAGTTGGG 57.925 37.037 0.00 0.00 35.42 4.12
2929 3050 1.267121 TAGTTGGGTGACTGAGGAGC 58.733 55.000 0.00 0.00 0.00 4.70
2930 3051 0.472734 AGTTGGGTGACTGAGGAGCT 60.473 55.000 0.00 0.00 0.00 4.09
2931 3052 1.203187 AGTTGGGTGACTGAGGAGCTA 60.203 52.381 0.00 0.00 0.00 3.32
2933 3054 2.237392 GTTGGGTGACTGAGGAGCTAAT 59.763 50.000 0.00 0.00 0.00 1.73
3010 3133 2.774234 ACCAGGATCTGTATCAAGGTGG 59.226 50.000 0.00 0.00 38.59 4.61
3065 3188 2.100418 GGAAAGATGCCTGCTCAAATCC 59.900 50.000 0.00 0.00 0.00 3.01
3097 3220 6.292381 GCGGCATACTTTTGATCTAACACTAG 60.292 42.308 0.00 0.00 0.00 2.57
3147 3286 6.601217 GTGTAGTACTAGCTGGTAGGTACTTT 59.399 42.308 22.11 10.83 41.75 2.66
3151 3290 3.768215 ACTAGCTGGTAGGTACTTTGACC 59.232 47.826 17.30 0.00 41.75 4.02
3178 3317 4.382147 GGTCCAAGCGAACTCTCTATTCTT 60.382 45.833 0.00 0.00 0.00 2.52
3230 3369 8.970859 AGATTAAGATAGGTTGAGATTTGTGG 57.029 34.615 0.00 0.00 0.00 4.17
3255 3394 6.341316 GGTAGCATGAAAGACTTGTGATCTA 58.659 40.000 0.00 0.00 0.00 1.98
3339 3479 3.763897 ACTTCGCCCTGCTTTTTCATTAT 59.236 39.130 0.00 0.00 0.00 1.28
3361 3501 2.180159 TAGCTGGGAACGGAACAGGC 62.180 60.000 0.00 0.00 39.98 4.85
3364 3504 0.391263 CTGGGAACGGAACAGGCTAC 60.391 60.000 0.00 0.00 39.98 3.58
3365 3505 0.834687 TGGGAACGGAACAGGCTACT 60.835 55.000 0.00 0.00 0.00 2.57
3366 3506 4.870646 CTGGGAACGGAACAGGCTACTG 62.871 59.091 0.00 0.00 44.86 2.74
3374 3514 2.756400 CAGGCTACTGGGTTGGCA 59.244 61.111 8.09 0.00 41.13 4.92
3375 3515 1.675641 CAGGCTACTGGGTTGGCAC 60.676 63.158 8.09 0.00 41.13 5.01
3376 3516 1.847968 AGGCTACTGGGTTGGCACT 60.848 57.895 8.09 0.00 36.47 4.40
3377 3517 1.074951 GGCTACTGGGTTGGCACTT 59.925 57.895 0.00 0.00 34.54 3.16
3378 3518 1.244019 GGCTACTGGGTTGGCACTTG 61.244 60.000 0.00 0.00 34.54 3.16
3379 3519 1.244019 GCTACTGGGTTGGCACTTGG 61.244 60.000 0.00 0.00 0.00 3.61
3380 3520 1.228429 TACTGGGTTGGCACTTGGC 60.228 57.895 0.00 0.00 43.74 4.52
3387 3527 2.594536 TGGCACTTGGCAGTCACA 59.405 55.556 0.49 0.00 46.12 3.58
3388 3528 1.526686 TGGCACTTGGCAGTCACAG 60.527 57.895 0.49 0.00 46.12 3.66
3389 3529 2.269520 TGGCACTTGGCAGTCACAGT 62.270 55.000 0.49 0.00 46.12 3.55
3390 3530 2.408333 GCACTTGGCAGTCACAGTT 58.592 52.632 0.00 0.00 43.97 3.16
3391 3531 0.740737 GCACTTGGCAGTCACAGTTT 59.259 50.000 0.00 0.00 43.97 2.66
3392 3532 1.946768 GCACTTGGCAGTCACAGTTTA 59.053 47.619 0.00 0.00 43.97 2.01
3393 3533 2.287009 GCACTTGGCAGTCACAGTTTAC 60.287 50.000 0.00 0.00 43.97 2.01
3394 3534 2.942376 CACTTGGCAGTCACAGTTTACA 59.058 45.455 0.00 0.00 0.00 2.41
3395 3535 3.376859 CACTTGGCAGTCACAGTTTACAA 59.623 43.478 0.00 0.00 0.00 2.41
3396 3536 3.627577 ACTTGGCAGTCACAGTTTACAAG 59.372 43.478 0.00 0.00 39.76 3.16
3397 3537 2.571212 TGGCAGTCACAGTTTACAAGG 58.429 47.619 0.00 0.00 0.00 3.61
3398 3538 2.092646 TGGCAGTCACAGTTTACAAGGT 60.093 45.455 0.00 0.00 0.00 3.50
3399 3539 2.290641 GGCAGTCACAGTTTACAAGGTG 59.709 50.000 0.00 0.00 0.00 4.00
3400 3540 3.202906 GCAGTCACAGTTTACAAGGTGA 58.797 45.455 0.00 0.00 37.89 4.02
3401 3541 3.625764 GCAGTCACAGTTTACAAGGTGAA 59.374 43.478 0.00 0.00 41.45 3.18
3402 3542 4.275936 GCAGTCACAGTTTACAAGGTGAAT 59.724 41.667 0.00 0.00 41.45 2.57
3403 3543 5.221048 GCAGTCACAGTTTACAAGGTGAATT 60.221 40.000 0.00 0.00 41.45 2.17
3404 3544 6.201517 CAGTCACAGTTTACAAGGTGAATTG 58.798 40.000 0.00 0.00 41.45 2.32
3405 3545 5.885912 AGTCACAGTTTACAAGGTGAATTGT 59.114 36.000 0.00 0.00 45.19 2.71
3406 3546 7.011950 CAGTCACAGTTTACAAGGTGAATTGTA 59.988 37.037 0.00 0.00 43.10 2.41
3407 3547 7.012044 AGTCACAGTTTACAAGGTGAATTGTAC 59.988 37.037 0.00 0.00 43.48 2.90
3408 3548 6.824196 TCACAGTTTACAAGGTGAATTGTACA 59.176 34.615 0.00 0.00 43.48 2.90
3409 3549 7.011950 TCACAGTTTACAAGGTGAATTGTACAG 59.988 37.037 0.00 0.00 43.48 2.74
3410 3550 6.826741 ACAGTTTACAAGGTGAATTGTACAGT 59.173 34.615 0.00 0.00 43.48 3.55
3411 3551 7.988599 ACAGTTTACAAGGTGAATTGTACAGTA 59.011 33.333 0.00 0.00 43.48 2.74
3412 3552 8.999431 CAGTTTACAAGGTGAATTGTACAGTAT 58.001 33.333 0.00 0.00 43.48 2.12
3413 3553 8.999431 AGTTTACAAGGTGAATTGTACAGTATG 58.001 33.333 0.00 0.00 43.48 2.39
3414 3554 8.995220 GTTTACAAGGTGAATTGTACAGTATGA 58.005 33.333 0.00 0.00 43.48 2.15
3415 3555 9.733556 TTTACAAGGTGAATTGTACAGTATGAT 57.266 29.630 0.00 0.00 43.48 2.45
3416 3556 9.733556 TTACAAGGTGAATTGTACAGTATGATT 57.266 29.630 0.00 0.00 43.48 2.57
3417 3557 8.635765 ACAAGGTGAATTGTACAGTATGATTT 57.364 30.769 0.00 0.00 41.53 2.17
3418 3558 8.514594 ACAAGGTGAATTGTACAGTATGATTTG 58.485 33.333 0.00 1.45 41.53 2.32
3419 3559 8.514594 CAAGGTGAATTGTACAGTATGATTTGT 58.485 33.333 0.00 0.00 39.69 2.83
3420 3560 9.733556 AAGGTGAATTGTACAGTATGATTTGTA 57.266 29.630 0.00 0.00 39.69 2.41
3421 3561 9.162764 AGGTGAATTGTACAGTATGATTTGTAC 57.837 33.333 10.94 10.94 46.14 2.90
3422 3562 8.395633 GGTGAATTGTACAGTATGATTTGTACC 58.604 37.037 13.69 0.74 45.64 3.34
3423 3563 8.941977 GTGAATTGTACAGTATGATTTGTACCA 58.058 33.333 13.69 6.75 45.64 3.25
3424 3564 8.941977 TGAATTGTACAGTATGATTTGTACCAC 58.058 33.333 13.69 6.63 45.64 4.16
3425 3565 8.856153 AATTGTACAGTATGATTTGTACCACA 57.144 30.769 13.69 0.93 45.64 4.17
3426 3566 7.899178 TTGTACAGTATGATTTGTACCACAG 57.101 36.000 13.69 0.00 45.64 3.66
3427 3567 6.403049 TGTACAGTATGATTTGTACCACAGG 58.597 40.000 13.69 0.00 45.64 4.00
3428 3568 4.843728 ACAGTATGATTTGTACCACAGGG 58.156 43.478 0.00 0.00 39.69 4.45
3429 3569 3.627577 CAGTATGATTTGTACCACAGGGC 59.372 47.826 0.00 0.00 39.69 5.19
3430 3570 1.750193 ATGATTTGTACCACAGGGCG 58.250 50.000 0.00 0.00 37.90 6.13
3431 3571 0.322098 TGATTTGTACCACAGGGCGG 60.322 55.000 0.00 0.00 37.90 6.13
3432 3572 1.001393 ATTTGTACCACAGGGCGGG 60.001 57.895 0.00 0.00 37.90 6.13
3433 3573 1.493854 ATTTGTACCACAGGGCGGGA 61.494 55.000 0.00 0.00 37.90 5.14
3434 3574 2.400269 TTTGTACCACAGGGCGGGAC 62.400 60.000 0.00 0.00 37.93 4.46
3435 3575 3.001406 GTACCACAGGGCGGGACT 61.001 66.667 0.00 0.00 34.18 3.85
3436 3576 2.203877 TACCACAGGGCGGGACTT 60.204 61.111 0.00 0.00 37.90 3.01
3437 3577 2.589157 TACCACAGGGCGGGACTTG 61.589 63.158 0.00 0.00 37.90 3.16
3438 3578 4.722700 CCACAGGGCGGGACTTGG 62.723 72.222 0.00 0.00 0.00 3.61
3446 3586 2.281761 CGGGACTTGGCTGCTGTT 60.282 61.111 0.00 0.00 0.00 3.16
3447 3587 2.620112 CGGGACTTGGCTGCTGTTG 61.620 63.158 0.00 0.00 0.00 3.33
3448 3588 2.270986 GGGACTTGGCTGCTGTTGG 61.271 63.158 0.00 0.00 0.00 3.77
3449 3589 1.529244 GGACTTGGCTGCTGTTGGT 60.529 57.895 0.00 0.00 0.00 3.67
3450 3590 0.250727 GGACTTGGCTGCTGTTGGTA 60.251 55.000 0.00 0.00 0.00 3.25
3451 3591 1.160137 GACTTGGCTGCTGTTGGTAG 58.840 55.000 0.00 0.00 0.00 3.18
3452 3592 0.764890 ACTTGGCTGCTGTTGGTAGA 59.235 50.000 0.00 0.00 0.00 2.59
3453 3593 1.271054 ACTTGGCTGCTGTTGGTAGAG 60.271 52.381 0.00 0.00 0.00 2.43
3454 3594 0.764890 TTGGCTGCTGTTGGTAGAGT 59.235 50.000 0.00 0.00 0.00 3.24
3455 3595 0.035317 TGGCTGCTGTTGGTAGAGTG 59.965 55.000 0.00 0.00 0.00 3.51
3456 3596 0.674895 GGCTGCTGTTGGTAGAGTGG 60.675 60.000 0.00 0.00 0.00 4.00
3457 3597 0.321671 GCTGCTGTTGGTAGAGTGGA 59.678 55.000 0.00 0.00 0.00 4.02
3458 3598 1.270839 GCTGCTGTTGGTAGAGTGGAA 60.271 52.381 0.00 0.00 0.00 3.53
3459 3599 2.693069 CTGCTGTTGGTAGAGTGGAAG 58.307 52.381 0.00 0.00 0.00 3.46
3460 3600 2.300152 CTGCTGTTGGTAGAGTGGAAGA 59.700 50.000 0.00 0.00 0.00 2.87
3461 3601 2.300152 TGCTGTTGGTAGAGTGGAAGAG 59.700 50.000 0.00 0.00 0.00 2.85
3462 3602 2.354203 GCTGTTGGTAGAGTGGAAGAGG 60.354 54.545 0.00 0.00 0.00 3.69
3463 3603 3.165875 CTGTTGGTAGAGTGGAAGAGGA 58.834 50.000 0.00 0.00 0.00 3.71
3464 3604 3.578716 CTGTTGGTAGAGTGGAAGAGGAA 59.421 47.826 0.00 0.00 0.00 3.36
3465 3605 3.578716 TGTTGGTAGAGTGGAAGAGGAAG 59.421 47.826 0.00 0.00 0.00 3.46
3466 3606 3.827817 TGGTAGAGTGGAAGAGGAAGA 57.172 47.619 0.00 0.00 0.00 2.87
3467 3607 3.702792 TGGTAGAGTGGAAGAGGAAGAG 58.297 50.000 0.00 0.00 0.00 2.85
3468 3608 3.028130 GGTAGAGTGGAAGAGGAAGAGG 58.972 54.545 0.00 0.00 0.00 3.69
3469 3609 3.309265 GGTAGAGTGGAAGAGGAAGAGGA 60.309 52.174 0.00 0.00 0.00 3.71
3470 3610 3.100207 AGAGTGGAAGAGGAAGAGGAG 57.900 52.381 0.00 0.00 0.00 3.69
3471 3611 1.480545 GAGTGGAAGAGGAAGAGGAGC 59.519 57.143 0.00 0.00 0.00 4.70
3472 3612 0.174617 GTGGAAGAGGAAGAGGAGCG 59.825 60.000 0.00 0.00 0.00 5.03
3473 3613 0.251832 TGGAAGAGGAAGAGGAGCGT 60.252 55.000 0.00 0.00 0.00 5.07
3474 3614 0.174617 GGAAGAGGAAGAGGAGCGTG 59.825 60.000 0.00 0.00 0.00 5.34
3475 3615 0.174617 GAAGAGGAAGAGGAGCGTGG 59.825 60.000 0.00 0.00 0.00 4.94
3476 3616 1.893919 AAGAGGAAGAGGAGCGTGGC 61.894 60.000 0.00 0.00 0.00 5.01
3477 3617 3.378399 GAGGAAGAGGAGCGTGGCC 62.378 68.421 0.00 0.00 0.00 5.36
3478 3618 3.706373 GGAAGAGGAGCGTGGCCA 61.706 66.667 0.00 0.00 0.00 5.36
3479 3619 2.125350 GAAGAGGAGCGTGGCCAG 60.125 66.667 5.11 0.84 0.00 4.85
3480 3620 4.400961 AAGAGGAGCGTGGCCAGC 62.401 66.667 5.11 12.81 0.00 4.85
3482 3622 4.400961 GAGGAGCGTGGCCAGCTT 62.401 66.667 24.53 13.82 46.13 3.74
3483 3623 4.400961 AGGAGCGTGGCCAGCTTC 62.401 66.667 24.53 23.02 46.13 3.86
3494 3634 2.659016 CAGCTTCGGTGGAGAGCA 59.341 61.111 0.00 0.00 0.00 4.26
3495 3635 1.739562 CAGCTTCGGTGGAGAGCAC 60.740 63.158 0.00 0.00 0.00 4.40
3496 3636 2.435059 GCTTCGGTGGAGAGCACC 60.435 66.667 0.00 0.00 39.26 5.01
3535 3675 2.954868 CGCTCGGACCGGAAATCG 60.955 66.667 15.25 6.29 38.88 3.34
3555 3695 2.754658 GCTCCGAGTCCGAGGGAA 60.755 66.667 10.03 0.00 38.22 3.97
3556 3696 2.776913 GCTCCGAGTCCGAGGGAAG 61.777 68.421 10.03 0.00 38.22 3.46
3557 3697 2.754658 TCCGAGTCCGAGGGAAGC 60.755 66.667 0.00 0.00 38.22 3.86
3558 3698 3.068691 CCGAGTCCGAGGGAAGCA 61.069 66.667 0.00 0.00 38.22 3.91
3559 3699 2.182030 CGAGTCCGAGGGAAGCAC 59.818 66.667 0.00 0.00 38.22 4.40
3560 3700 2.182030 GAGTCCGAGGGAAGCACG 59.818 66.667 0.00 0.00 31.38 5.34
3561 3701 3.991536 GAGTCCGAGGGAAGCACGC 62.992 68.421 0.00 0.00 31.38 5.34
3566 3706 4.373116 GAGGGAAGCACGCCACGA 62.373 66.667 0.00 0.00 0.00 4.35
3567 3707 4.681978 AGGGAAGCACGCCACGAC 62.682 66.667 0.00 0.00 0.00 4.34
3569 3709 4.980805 GGAAGCACGCCACGACCA 62.981 66.667 0.00 0.00 0.00 4.02
3570 3710 3.712881 GAAGCACGCCACGACCAC 61.713 66.667 0.00 0.00 0.00 4.16
3582 3722 4.722700 GACCACCGTGGCAGCCAT 62.723 66.667 19.75 0.00 42.67 4.40
3584 3724 4.720902 CCACCGTGGCAGCCATGA 62.721 66.667 32.26 0.00 42.73 3.07
3585 3725 2.672651 CACCGTGGCAGCCATGAA 60.673 61.111 32.26 0.00 42.73 2.57
3586 3726 2.048023 CACCGTGGCAGCCATGAAT 61.048 57.895 32.26 18.24 42.73 2.57
3587 3727 0.747644 CACCGTGGCAGCCATGAATA 60.748 55.000 32.26 0.00 42.73 1.75
3588 3728 0.183492 ACCGTGGCAGCCATGAATAT 59.817 50.000 32.26 13.44 42.73 1.28
3589 3729 1.419762 ACCGTGGCAGCCATGAATATA 59.580 47.619 32.26 0.00 42.73 0.86
3590 3730 1.806542 CCGTGGCAGCCATGAATATAC 59.193 52.381 32.26 9.67 42.73 1.47
3591 3731 1.806542 CGTGGCAGCCATGAATATACC 59.193 52.381 27.62 5.29 42.73 2.73
3592 3732 2.550855 CGTGGCAGCCATGAATATACCT 60.551 50.000 27.62 0.00 42.73 3.08
3593 3733 3.306710 CGTGGCAGCCATGAATATACCTA 60.307 47.826 27.62 0.00 42.73 3.08
3594 3734 4.003648 GTGGCAGCCATGAATATACCTAC 58.996 47.826 19.75 0.00 35.28 3.18
3595 3735 3.009033 TGGCAGCCATGAATATACCTACC 59.991 47.826 11.22 0.00 0.00 3.18
3596 3736 3.610911 GCAGCCATGAATATACCTACCC 58.389 50.000 0.00 0.00 0.00 3.69
3597 3737 3.861840 CAGCCATGAATATACCTACCCG 58.138 50.000 0.00 0.00 0.00 5.28
3598 3738 2.838202 AGCCATGAATATACCTACCCGG 59.162 50.000 0.00 0.00 39.35 5.73
3599 3739 2.835764 GCCATGAATATACCTACCCGGA 59.164 50.000 0.73 0.00 36.31 5.14
3600 3740 3.118738 GCCATGAATATACCTACCCGGAG 60.119 52.174 0.73 0.00 36.31 4.63
3613 3753 3.532501 CGGAGGGAGCTCTTCCTC 58.467 66.667 23.79 23.79 45.98 3.71
3618 3758 4.952704 GGAGCTCTTCCTCCTTGC 57.047 61.111 14.64 0.00 46.39 4.01
3619 3759 1.986413 GGAGCTCTTCCTCCTTGCA 59.014 57.895 14.64 0.00 46.39 4.08
3620 3760 0.326264 GGAGCTCTTCCTCCTTGCAA 59.674 55.000 14.64 0.00 46.39 4.08
3621 3761 1.271597 GGAGCTCTTCCTCCTTGCAAA 60.272 52.381 14.64 0.00 46.39 3.68
3622 3762 2.083002 GAGCTCTTCCTCCTTGCAAAG 58.917 52.381 6.43 0.00 45.69 2.77
3623 3763 0.525311 GCTCTTCCTCCTTGCAAAGC 59.475 55.000 0.00 0.00 44.44 3.51
3624 3764 1.885790 GCTCTTCCTCCTTGCAAAGCT 60.886 52.381 0.00 0.00 44.44 3.74
3625 3765 2.512705 CTCTTCCTCCTTGCAAAGCTT 58.487 47.619 0.00 0.00 44.44 3.74
3626 3766 2.889678 CTCTTCCTCCTTGCAAAGCTTT 59.110 45.455 5.69 5.69 44.44 3.51
3627 3767 2.624838 TCTTCCTCCTTGCAAAGCTTTG 59.375 45.455 30.70 30.70 44.44 2.77
3628 3768 1.331214 TCCTCCTTGCAAAGCTTTGG 58.669 50.000 34.02 21.08 44.44 3.28
3629 3769 1.133513 TCCTCCTTGCAAAGCTTTGGA 60.134 47.619 34.02 30.84 44.44 3.53
3630 3770 1.271656 CCTCCTTGCAAAGCTTTGGAG 59.728 52.381 34.02 29.51 44.44 3.86
3631 3771 1.959282 CTCCTTGCAAAGCTTTGGAGT 59.041 47.619 34.02 1.13 44.44 3.85
3632 3772 2.363359 CTCCTTGCAAAGCTTTGGAGTT 59.637 45.455 34.02 0.32 44.44 3.01
3633 3773 2.765699 TCCTTGCAAAGCTTTGGAGTTT 59.234 40.909 34.02 0.00 44.44 2.66
3634 3774 3.197549 TCCTTGCAAAGCTTTGGAGTTTT 59.802 39.130 34.02 0.00 44.44 2.43
3635 3775 3.940852 CCTTGCAAAGCTTTGGAGTTTTT 59.059 39.130 34.02 0.00 44.44 1.94
3662 3802 9.665719 TTTTTGAAAAGATAAAGCTTTGGAGTT 57.334 25.926 22.02 8.99 38.08 3.01
3663 3803 8.647143 TTTGAAAAGATAAAGCTTTGGAGTTG 57.353 30.769 22.02 0.00 38.08 3.16
3664 3804 7.581213 TGAAAAGATAAAGCTTTGGAGTTGA 57.419 32.000 22.02 0.00 38.08 3.18
3665 3805 8.006298 TGAAAAGATAAAGCTTTGGAGTTGAA 57.994 30.769 22.02 0.00 38.08 2.69
3666 3806 8.137437 TGAAAAGATAAAGCTTTGGAGTTGAAG 58.863 33.333 22.02 0.00 38.08 3.02
3667 3807 7.823745 AAAGATAAAGCTTTGGAGTTGAAGA 57.176 32.000 22.02 0.00 36.77 2.87
3668 3808 7.823745 AAGATAAAGCTTTGGAGTTGAAGAA 57.176 32.000 22.02 0.00 0.00 2.52
3669 3809 8.414629 AAGATAAAGCTTTGGAGTTGAAGAAT 57.585 30.769 22.02 2.16 0.00 2.40
3670 3810 7.824672 AGATAAAGCTTTGGAGTTGAAGAATG 58.175 34.615 22.02 0.00 0.00 2.67
3671 3811 5.859205 AAAGCTTTGGAGTTGAAGAATGT 57.141 34.783 11.80 0.00 0.00 2.71
3672 3812 6.959639 AAAGCTTTGGAGTTGAAGAATGTA 57.040 33.333 11.80 0.00 0.00 2.29
3673 3813 6.566197 AAGCTTTGGAGTTGAAGAATGTAG 57.434 37.500 0.00 0.00 0.00 2.74
3674 3814 5.869579 AGCTTTGGAGTTGAAGAATGTAGA 58.130 37.500 0.00 0.00 0.00 2.59
3675 3815 6.299141 AGCTTTGGAGTTGAAGAATGTAGAA 58.701 36.000 0.00 0.00 0.00 2.10
3676 3816 6.429385 AGCTTTGGAGTTGAAGAATGTAGAAG 59.571 38.462 0.00 0.00 0.00 2.85
3677 3817 6.348868 GCTTTGGAGTTGAAGAATGTAGAAGG 60.349 42.308 0.00 0.00 0.00 3.46
3678 3818 5.825593 TGGAGTTGAAGAATGTAGAAGGT 57.174 39.130 0.00 0.00 0.00 3.50
3679 3819 5.551233 TGGAGTTGAAGAATGTAGAAGGTG 58.449 41.667 0.00 0.00 0.00 4.00
3680 3820 5.306937 TGGAGTTGAAGAATGTAGAAGGTGA 59.693 40.000 0.00 0.00 0.00 4.02
3681 3821 5.872070 GGAGTTGAAGAATGTAGAAGGTGAG 59.128 44.000 0.00 0.00 0.00 3.51
3682 3822 6.295349 GGAGTTGAAGAATGTAGAAGGTGAGA 60.295 42.308 0.00 0.00 0.00 3.27
3683 3823 7.251321 AGTTGAAGAATGTAGAAGGTGAGAT 57.749 36.000 0.00 0.00 0.00 2.75
3684 3824 7.102346 AGTTGAAGAATGTAGAAGGTGAGATG 58.898 38.462 0.00 0.00 0.00 2.90
3685 3825 6.857437 TGAAGAATGTAGAAGGTGAGATGA 57.143 37.500 0.00 0.00 0.00 2.92
3686 3826 6.871844 TGAAGAATGTAGAAGGTGAGATGAG 58.128 40.000 0.00 0.00 0.00 2.90
3687 3827 6.665248 TGAAGAATGTAGAAGGTGAGATGAGA 59.335 38.462 0.00 0.00 0.00 3.27
3688 3828 6.713762 AGAATGTAGAAGGTGAGATGAGAG 57.286 41.667 0.00 0.00 0.00 3.20
3689 3829 6.194235 AGAATGTAGAAGGTGAGATGAGAGT 58.806 40.000 0.00 0.00 0.00 3.24
3690 3830 5.850557 ATGTAGAAGGTGAGATGAGAGTG 57.149 43.478 0.00 0.00 0.00 3.51
3691 3831 3.445450 TGTAGAAGGTGAGATGAGAGTGC 59.555 47.826 0.00 0.00 0.00 4.40
3692 3832 1.476085 AGAAGGTGAGATGAGAGTGCG 59.524 52.381 0.00 0.00 0.00 5.34
3693 3833 1.474478 GAAGGTGAGATGAGAGTGCGA 59.526 52.381 0.00 0.00 0.00 5.10
3694 3834 1.102154 AGGTGAGATGAGAGTGCGAG 58.898 55.000 0.00 0.00 0.00 5.03
3695 3835 0.814457 GGTGAGATGAGAGTGCGAGT 59.186 55.000 0.00 0.00 0.00 4.18
3696 3836 1.468908 GGTGAGATGAGAGTGCGAGTG 60.469 57.143 0.00 0.00 0.00 3.51
3697 3837 0.813821 TGAGATGAGAGTGCGAGTGG 59.186 55.000 0.00 0.00 0.00 4.00
3698 3838 1.098869 GAGATGAGAGTGCGAGTGGA 58.901 55.000 0.00 0.00 0.00 4.02
3699 3839 1.474478 GAGATGAGAGTGCGAGTGGAA 59.526 52.381 0.00 0.00 0.00 3.53
3700 3840 1.895798 AGATGAGAGTGCGAGTGGAAA 59.104 47.619 0.00 0.00 0.00 3.13
3701 3841 1.996191 GATGAGAGTGCGAGTGGAAAC 59.004 52.381 0.00 0.00 0.00 2.78
3702 3842 0.318699 TGAGAGTGCGAGTGGAAACG 60.319 55.000 0.00 0.00 0.00 3.60
3703 3843 1.006102 AGAGTGCGAGTGGAAACGG 60.006 57.895 0.00 0.00 0.00 4.44
3704 3844 1.006571 GAGTGCGAGTGGAAACGGA 60.007 57.895 0.00 0.00 0.00 4.69
3705 3845 1.006102 AGTGCGAGTGGAAACGGAG 60.006 57.895 0.00 0.00 0.00 4.63
3706 3846 2.357034 TGCGAGTGGAAACGGAGC 60.357 61.111 0.00 0.00 0.00 4.70
3707 3847 2.357034 GCGAGTGGAAACGGAGCA 60.357 61.111 0.00 0.00 0.00 4.26
3708 3848 2.668280 GCGAGTGGAAACGGAGCAC 61.668 63.158 0.00 0.00 0.00 4.40
3709 3849 1.300620 CGAGTGGAAACGGAGCACA 60.301 57.895 0.00 0.00 0.00 4.57
3710 3850 1.557443 CGAGTGGAAACGGAGCACAC 61.557 60.000 0.00 0.00 0.00 3.82
3711 3851 0.531974 GAGTGGAAACGGAGCACACA 60.532 55.000 0.00 0.00 34.65 3.72
3979 4119 8.996024 ACTCTCTAAACTCTGAAAAATAGAGC 57.004 34.615 0.00 0.00 44.30 4.09
3980 4120 8.811994 ACTCTCTAAACTCTGAAAAATAGAGCT 58.188 33.333 0.00 0.00 44.30 4.09
3987 4127 7.928307 ACTCTGAAAAATAGAGCTAATTGCA 57.072 32.000 0.00 0.00 44.30 4.08
3988 4128 8.517062 ACTCTGAAAAATAGAGCTAATTGCAT 57.483 30.769 0.00 0.00 44.30 3.96
3989 4129 8.619546 ACTCTGAAAAATAGAGCTAATTGCATC 58.380 33.333 0.00 0.00 44.30 3.91
3990 4130 8.743085 TCTGAAAAATAGAGCTAATTGCATCT 57.257 30.769 0.00 0.00 45.94 2.90
3991 4131 9.836864 TCTGAAAAATAGAGCTAATTGCATCTA 57.163 29.630 0.00 0.00 45.94 1.98
3997 4137 9.883142 AAATAGAGCTAATTGCATCTATAGTCC 57.117 33.333 5.85 0.00 45.94 3.85
3998 4138 8.837099 ATAGAGCTAATTGCATCTATAGTCCT 57.163 34.615 3.90 2.28 45.94 3.85
3999 4139 7.169158 AGAGCTAATTGCATCTATAGTCCTC 57.831 40.000 0.00 0.00 45.94 3.71
4000 4140 5.960113 AGCTAATTGCATCTATAGTCCTCG 58.040 41.667 0.00 0.00 45.94 4.63
4001 4141 5.478679 AGCTAATTGCATCTATAGTCCTCGT 59.521 40.000 0.00 0.00 45.94 4.18
4002 4142 6.659668 AGCTAATTGCATCTATAGTCCTCGTA 59.340 38.462 0.00 0.00 45.94 3.43
4003 4143 6.970043 GCTAATTGCATCTATAGTCCTCGTAG 59.030 42.308 0.00 0.00 42.31 3.51
4004 4144 6.902771 AATTGCATCTATAGTCCTCGTAGT 57.097 37.500 0.00 0.00 0.00 2.73
4005 4145 5.943706 TTGCATCTATAGTCCTCGTAGTC 57.056 43.478 0.00 0.00 0.00 2.59
4006 4146 3.995048 TGCATCTATAGTCCTCGTAGTCG 59.005 47.826 0.00 0.00 38.55 4.18
4007 4147 4.244066 GCATCTATAGTCCTCGTAGTCGA 58.756 47.826 0.00 0.00 44.12 4.20
4008 4148 4.871557 GCATCTATAGTCCTCGTAGTCGAT 59.128 45.833 0.00 0.00 45.21 3.59
4009 4149 5.005971 GCATCTATAGTCCTCGTAGTCGATC 59.994 48.000 0.00 0.00 45.21 3.69
4010 4150 5.718724 TCTATAGTCCTCGTAGTCGATCA 57.281 43.478 0.00 0.00 45.21 2.92
4011 4151 5.468592 TCTATAGTCCTCGTAGTCGATCAC 58.531 45.833 0.00 0.00 45.21 3.06
4012 4152 2.398252 AGTCCTCGTAGTCGATCACA 57.602 50.000 0.00 0.00 45.21 3.58
4013 4153 2.708051 AGTCCTCGTAGTCGATCACAA 58.292 47.619 0.00 0.00 45.21 3.33
4014 4154 2.419324 AGTCCTCGTAGTCGATCACAAC 59.581 50.000 0.00 0.00 45.21 3.32
4015 4155 2.161012 GTCCTCGTAGTCGATCACAACA 59.839 50.000 0.00 0.00 45.21 3.33
4016 4156 3.014623 TCCTCGTAGTCGATCACAACAT 58.985 45.455 0.00 0.00 45.21 2.71
4017 4157 3.064958 TCCTCGTAGTCGATCACAACATC 59.935 47.826 0.00 0.00 45.21 3.06
4018 4158 3.364062 CTCGTAGTCGATCACAACATCC 58.636 50.000 0.00 0.00 45.21 3.51
4019 4159 2.750712 TCGTAGTCGATCACAACATCCA 59.249 45.455 0.00 0.00 41.35 3.41
4020 4160 3.191791 TCGTAGTCGATCACAACATCCAA 59.808 43.478 0.00 0.00 41.35 3.53
4021 4161 3.303495 CGTAGTCGATCACAACATCCAAC 59.697 47.826 0.00 0.00 39.71 3.77
4022 4162 3.685139 AGTCGATCACAACATCCAACT 57.315 42.857 0.00 0.00 0.00 3.16
4023 4163 4.008074 AGTCGATCACAACATCCAACTT 57.992 40.909 0.00 0.00 0.00 2.66
4024 4164 3.748048 AGTCGATCACAACATCCAACTTG 59.252 43.478 0.00 0.00 0.00 3.16
4025 4165 3.073678 TCGATCACAACATCCAACTTGG 58.926 45.455 0.74 0.74 39.43 3.61
4026 4166 2.813754 CGATCACAACATCCAACTTGGT 59.186 45.455 7.72 0.00 39.03 3.67
4027 4167 3.120199 CGATCACAACATCCAACTTGGTC 60.120 47.826 7.72 0.00 39.03 4.02
4028 4168 3.289407 TCACAACATCCAACTTGGTCA 57.711 42.857 7.72 0.00 39.03 4.02
4029 4169 3.831323 TCACAACATCCAACTTGGTCAT 58.169 40.909 7.72 0.00 39.03 3.06
4030 4170 3.569277 TCACAACATCCAACTTGGTCATG 59.431 43.478 7.72 7.66 39.03 3.07
4031 4171 2.892852 ACAACATCCAACTTGGTCATGG 59.107 45.455 7.72 0.00 39.03 3.66
4032 4172 3.156293 CAACATCCAACTTGGTCATGGA 58.844 45.455 7.72 0.00 46.60 3.41
4033 4173 3.077484 ACATCCAACTTGGTCATGGAG 57.923 47.619 7.72 0.00 45.82 3.86
4034 4174 2.291153 ACATCCAACTTGGTCATGGAGG 60.291 50.000 7.72 4.33 45.82 4.30
4035 4175 1.444933 TCCAACTTGGTCATGGAGGT 58.555 50.000 7.72 0.00 38.30 3.85
4036 4176 1.780309 TCCAACTTGGTCATGGAGGTT 59.220 47.619 7.72 0.00 38.30 3.50
4037 4177 1.888512 CCAACTTGGTCATGGAGGTTG 59.111 52.381 0.00 1.02 36.27 3.77
4038 4178 2.586425 CAACTTGGTCATGGAGGTTGT 58.414 47.619 0.00 0.00 32.27 3.32
4039 4179 3.497763 CCAACTTGGTCATGGAGGTTGTA 60.498 47.826 0.00 0.00 36.27 2.41
4040 4180 4.141287 CAACTTGGTCATGGAGGTTGTAA 58.859 43.478 0.00 0.00 32.27 2.41
4041 4181 4.447138 ACTTGGTCATGGAGGTTGTAAA 57.553 40.909 0.00 0.00 0.00 2.01
4042 4182 4.398319 ACTTGGTCATGGAGGTTGTAAAG 58.602 43.478 0.00 0.00 0.00 1.85
4043 4183 4.141251 ACTTGGTCATGGAGGTTGTAAAGT 60.141 41.667 0.00 0.00 0.00 2.66
4044 4184 3.750371 TGGTCATGGAGGTTGTAAAGTG 58.250 45.455 0.00 0.00 0.00 3.16
4045 4185 2.488153 GGTCATGGAGGTTGTAAAGTGC 59.512 50.000 0.00 0.00 0.00 4.40
4046 4186 3.412386 GTCATGGAGGTTGTAAAGTGCT 58.588 45.455 0.00 0.00 0.00 4.40
4047 4187 3.437049 GTCATGGAGGTTGTAAAGTGCTC 59.563 47.826 0.00 0.00 0.00 4.26
4048 4188 2.561478 TGGAGGTTGTAAAGTGCTCC 57.439 50.000 0.00 0.00 0.00 4.70
4049 4189 1.771854 TGGAGGTTGTAAAGTGCTCCA 59.228 47.619 0.00 0.00 37.20 3.86
4050 4190 2.173782 TGGAGGTTGTAAAGTGCTCCAA 59.826 45.455 0.00 0.00 36.69 3.53
4051 4191 3.181434 TGGAGGTTGTAAAGTGCTCCAAT 60.181 43.478 0.00 0.00 36.69 3.16
4052 4192 4.042311 TGGAGGTTGTAAAGTGCTCCAATA 59.958 41.667 0.00 0.00 36.69 1.90
4053 4193 4.395231 GGAGGTTGTAAAGTGCTCCAATAC 59.605 45.833 0.00 0.00 0.00 1.89
4054 4194 4.000988 AGGTTGTAAAGTGCTCCAATACG 58.999 43.478 0.00 0.00 0.00 3.06
4055 4195 3.126343 GGTTGTAAAGTGCTCCAATACGG 59.874 47.826 0.00 0.00 0.00 4.02
4056 4196 3.688694 TGTAAAGTGCTCCAATACGGT 57.311 42.857 0.00 0.00 35.57 4.83
4057 4197 3.592059 TGTAAAGTGCTCCAATACGGTC 58.408 45.455 0.00 0.00 35.57 4.79
4058 4198 2.109425 AAAGTGCTCCAATACGGTCC 57.891 50.000 0.00 0.00 35.57 4.46
4059 4199 0.252197 AAGTGCTCCAATACGGTCCC 59.748 55.000 0.00 0.00 35.57 4.46
4060 4200 1.520787 GTGCTCCAATACGGTCCCG 60.521 63.158 3.76 3.76 46.03 5.14
4061 4201 2.108362 GCTCCAATACGGTCCCGG 59.892 66.667 10.91 0.00 44.69 5.73
4062 4202 2.728435 GCTCCAATACGGTCCCGGT 61.728 63.158 10.91 0.00 44.69 5.28
4063 4203 1.394266 GCTCCAATACGGTCCCGGTA 61.394 60.000 10.91 1.00 44.69 4.02
4064 4204 0.386838 CTCCAATACGGTCCCGGTAC 59.613 60.000 10.91 0.00 44.69 3.34
4065 4205 0.324183 TCCAATACGGTCCCGGTACA 60.324 55.000 10.91 0.00 44.69 2.90
4066 4206 0.754472 CCAATACGGTCCCGGTACAT 59.246 55.000 10.91 0.00 44.69 2.29
4067 4207 1.539496 CCAATACGGTCCCGGTACATG 60.539 57.143 10.91 0.00 44.69 3.21
4068 4208 0.105408 AATACGGTCCCGGTACATGC 59.895 55.000 10.91 0.00 44.69 4.06
4069 4209 1.044231 ATACGGTCCCGGTACATGCA 61.044 55.000 10.91 0.00 44.69 3.96
4070 4210 1.256361 TACGGTCCCGGTACATGCAA 61.256 55.000 10.91 0.00 44.69 4.08
4071 4211 1.376166 CGGTCCCGGTACATGCAAA 60.376 57.895 0.00 0.00 35.56 3.68
4072 4212 0.746563 CGGTCCCGGTACATGCAAAT 60.747 55.000 0.00 0.00 35.56 2.32
4073 4213 1.473610 CGGTCCCGGTACATGCAAATA 60.474 52.381 0.00 0.00 35.56 1.40
4074 4214 2.808933 CGGTCCCGGTACATGCAAATAT 60.809 50.000 0.00 0.00 35.56 1.28
4075 4215 2.552315 GGTCCCGGTACATGCAAATATG 59.448 50.000 0.00 0.00 0.00 1.78
4076 4216 3.211045 GTCCCGGTACATGCAAATATGT 58.789 45.455 0.00 0.00 43.34 2.29
4077 4217 3.003275 GTCCCGGTACATGCAAATATGTG 59.997 47.826 0.00 0.00 41.18 3.21
4078 4218 3.118223 TCCCGGTACATGCAAATATGTGA 60.118 43.478 0.00 0.00 41.18 3.58
4079 4219 3.820467 CCCGGTACATGCAAATATGTGAT 59.180 43.478 0.00 0.00 41.18 3.06
4080 4220 4.083324 CCCGGTACATGCAAATATGTGATC 60.083 45.833 0.00 0.00 41.18 2.92
4081 4221 4.514816 CCGGTACATGCAAATATGTGATCA 59.485 41.667 0.00 0.00 41.18 2.92
4082 4222 5.008514 CCGGTACATGCAAATATGTGATCAA 59.991 40.000 0.00 0.00 41.18 2.57
4083 4223 6.294120 CCGGTACATGCAAATATGTGATCAAT 60.294 38.462 0.00 0.00 41.18 2.57
4084 4224 7.094848 CCGGTACATGCAAATATGTGATCAATA 60.095 37.037 0.00 0.00 41.18 1.90
4085 4225 7.746034 CGGTACATGCAAATATGTGATCAATAC 59.254 37.037 0.00 0.00 41.18 1.89
4086 4226 8.567104 GGTACATGCAAATATGTGATCAATACA 58.433 33.333 0.00 0.00 41.18 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 55 5.557576 TCTTGCAATGATCCTAGCTATGT 57.442 39.130 0.00 0.00 0.00 2.29
210 218 1.521010 TGTTCGACAAAACGCCCGA 60.521 52.632 0.00 0.00 31.58 5.14
338 346 1.839296 GCTTCCTCGGCCTATCCCT 60.839 63.158 0.00 0.00 0.00 4.20
410 418 3.645053 ACTCCATCTATCCCATCCAGT 57.355 47.619 0.00 0.00 0.00 4.00
424 432 2.393768 CGCTTGCTCGCAACTCCAT 61.394 57.895 0.00 0.00 0.00 3.41
438 446 0.946221 CGCTGGACTCTCAAACGCTT 60.946 55.000 0.00 0.00 0.00 4.68
443 451 2.738521 GCGCGCTGGACTCTCAAA 60.739 61.111 26.67 0.00 0.00 2.69
517 525 1.066752 ACACGCGCGGCATATCTAA 59.933 52.632 35.22 0.00 0.00 2.10
533 541 0.800012 GGCGAGGCGTAAAAATCACA 59.200 50.000 0.00 0.00 0.00 3.58
535 543 1.083489 CAGGCGAGGCGTAAAAATCA 58.917 50.000 0.00 0.00 0.00 2.57
550 558 2.202756 CGAGCTACCGTTCCAGGC 60.203 66.667 0.00 0.00 33.69 4.85
592 612 1.690352 ACCGCGTTATATAAGCACCCT 59.310 47.619 4.92 0.00 0.00 4.34
593 613 2.159327 ACCGCGTTATATAAGCACCC 57.841 50.000 4.92 0.00 0.00 4.61
596 616 3.310227 CCAACAACCGCGTTATATAAGCA 59.690 43.478 4.92 0.00 0.00 3.91
606 626 2.660552 CGTCTCCAACAACCGCGT 60.661 61.111 4.92 0.00 0.00 6.01
612 632 3.953712 TTCTCATAGCGTCTCCAACAA 57.046 42.857 0.00 0.00 0.00 2.83
622 642 4.259570 CGACATGTCTGTTTTCTCATAGCG 60.260 45.833 22.95 1.31 35.14 4.26
628 648 2.417719 AGCCGACATGTCTGTTTTCTC 58.582 47.619 22.95 3.57 35.14 2.87
630 650 2.918131 GCAAGCCGACATGTCTGTTTTC 60.918 50.000 22.95 11.78 35.14 2.29
632 652 0.593128 GCAAGCCGACATGTCTGTTT 59.407 50.000 22.95 17.45 35.14 2.83
635 655 0.952497 ACTGCAAGCCGACATGTCTG 60.952 55.000 22.95 17.76 37.60 3.51
636 656 0.250467 AACTGCAAGCCGACATGTCT 60.250 50.000 22.95 2.07 37.60 3.41
637 657 1.394917 CTAACTGCAAGCCGACATGTC 59.605 52.381 16.21 16.21 37.60 3.06
638 658 1.442769 CTAACTGCAAGCCGACATGT 58.557 50.000 0.00 0.00 37.60 3.21
639 659 0.729116 CCTAACTGCAAGCCGACATG 59.271 55.000 0.00 0.00 37.60 3.21
640 660 0.324943 ACCTAACTGCAAGCCGACAT 59.675 50.000 0.00 0.00 37.60 3.06
641 661 0.970640 TACCTAACTGCAAGCCGACA 59.029 50.000 0.00 0.00 37.60 4.35
642 662 2.000447 CTTACCTAACTGCAAGCCGAC 59.000 52.381 0.00 0.00 37.60 4.79
643 663 1.621814 ACTTACCTAACTGCAAGCCGA 59.378 47.619 0.00 0.00 37.60 5.54
644 664 2.094762 ACTTACCTAACTGCAAGCCG 57.905 50.000 0.00 0.00 37.60 5.52
645 665 4.277423 TCAAAACTTACCTAACTGCAAGCC 59.723 41.667 0.00 0.00 37.60 4.35
646 666 5.432885 TCAAAACTTACCTAACTGCAAGC 57.567 39.130 0.00 0.00 37.60 4.01
647 667 5.915196 GCTTCAAAACTTACCTAACTGCAAG 59.085 40.000 0.00 0.00 42.29 4.01
648 668 5.358442 TGCTTCAAAACTTACCTAACTGCAA 59.642 36.000 0.00 0.00 0.00 4.08
649 669 4.884744 TGCTTCAAAACTTACCTAACTGCA 59.115 37.500 0.00 0.00 0.00 4.41
650 670 5.212934 GTGCTTCAAAACTTACCTAACTGC 58.787 41.667 0.00 0.00 0.00 4.40
651 671 6.199393 GTGTGCTTCAAAACTTACCTAACTG 58.801 40.000 0.00 0.00 0.00 3.16
659 679 3.064271 GTCCACGTGTGCTTCAAAACTTA 59.936 43.478 15.65 0.00 0.00 2.24
706 726 0.878961 GGTCACCGTCGAATATGCCC 60.879 60.000 0.00 0.00 0.00 5.36
818 838 3.428589 GCATTCTCTGGAATTGGCAACTC 60.429 47.826 0.00 0.00 39.87 3.01
821 841 2.527497 TGCATTCTCTGGAATTGGCAA 58.473 42.857 0.68 0.68 39.87 4.52
835 855 4.978083 ATCTGGTGATCTTGTTGCATTC 57.022 40.909 0.00 0.00 0.00 2.67
896 916 3.031736 TGGGACGATTTTGTGGGAAAAA 58.968 40.909 0.00 0.00 33.76 1.94
901 921 2.825532 AGAATTGGGACGATTTTGTGGG 59.174 45.455 0.00 0.00 0.00 4.61
903 923 4.142600 GGAGAGAATTGGGACGATTTTGTG 60.143 45.833 0.00 0.00 0.00 3.33
904 924 4.010349 GGAGAGAATTGGGACGATTTTGT 58.990 43.478 0.00 0.00 0.00 2.83
905 925 4.009675 TGGAGAGAATTGGGACGATTTTG 58.990 43.478 0.00 0.00 0.00 2.44
958 1000 1.065928 CCCTCTTTCGTCGGGATCG 59.934 63.158 0.00 0.00 40.55 3.69
1003 1045 2.595655 CGACCCCCTCCAAATCCC 59.404 66.667 0.00 0.00 0.00 3.85
1253 1304 6.914757 GCATTACATTCCAGTGAAATTAGCTC 59.085 38.462 0.00 0.00 33.32 4.09
1270 1321 4.460382 CAGAACTGACCAAAGGCATTACAT 59.540 41.667 0.00 0.00 0.00 2.29
1905 1986 1.436336 GTACGTCTCGTGGATGGGG 59.564 63.158 0.00 0.00 41.39 4.96
1973 2054 2.896854 CCACCATCATCGGCGTGG 60.897 66.667 12.15 12.15 39.85 4.94
2070 2151 2.416701 GGAGAAGGAGTCGCTCTCTTTG 60.417 54.545 15.80 0.00 41.49 2.77
2072 2153 1.470051 GGAGAAGGAGTCGCTCTCTT 58.530 55.000 15.80 7.99 42.40 2.85
2073 2154 0.395173 GGGAGAAGGAGTCGCTCTCT 60.395 60.000 15.80 3.46 42.40 3.10
2170 2251 4.510038 AACTGGATTGAATTGTGTGAGC 57.490 40.909 0.00 0.00 0.00 4.26
2250 2336 7.385752 CCTGAATTTATTTGTTGTGCACAAGAT 59.614 33.333 31.81 24.85 46.37 2.40
2267 2353 6.407412 CCATCTGTACTGCTCTCCTGAATTTA 60.407 42.308 0.00 0.00 0.00 1.40
2277 2363 2.499289 CTCCAACCATCTGTACTGCTCT 59.501 50.000 0.00 0.00 0.00 4.09
2293 2379 0.850100 TTTGCCAGGTCCTTCTCCAA 59.150 50.000 0.00 0.00 0.00 3.53
2454 2540 3.011119 GTTACATACATGGCCGGTGAAA 58.989 45.455 14.26 3.19 0.00 2.69
2496 2584 8.660373 CAATTAATGTTCAGACTTCAGAGGTAC 58.340 37.037 0.00 0.00 0.00 3.34
2498 2586 6.656693 CCAATTAATGTTCAGACTTCAGAGGT 59.343 38.462 0.00 0.00 0.00 3.85
2499 2587 6.404074 GCCAATTAATGTTCAGACTTCAGAGG 60.404 42.308 0.00 0.00 0.00 3.69
2515 2603 3.359033 TCTCAGCTGCTTGCCAATTAAT 58.641 40.909 9.47 0.00 44.23 1.40
2869 2979 2.239150 AGGTCAGAAGCTACTCTCGGTA 59.761 50.000 0.00 0.00 0.00 4.02
2871 2981 1.757682 AGGTCAGAAGCTACTCTCGG 58.242 55.000 0.00 0.00 0.00 4.63
2872 2982 2.490115 ACAAGGTCAGAAGCTACTCTCG 59.510 50.000 0.00 0.00 31.54 4.04
2875 2985 5.845391 ATCTACAAGGTCAGAAGCTACTC 57.155 43.478 0.00 0.00 31.54 2.59
2876 2986 6.188407 TGTATCTACAAGGTCAGAAGCTACT 58.812 40.000 0.00 0.00 32.40 2.57
2878 2988 7.999545 AGTATGTATCTACAAGGTCAGAAGCTA 59.000 37.037 0.00 0.00 39.99 3.32
2911 3024 0.472734 AGCTCCTCAGTCACCCAACT 60.473 55.000 0.00 0.00 0.00 3.16
2912 3025 1.267121 TAGCTCCTCAGTCACCCAAC 58.733 55.000 0.00 0.00 0.00 3.77
2913 3026 2.024176 TTAGCTCCTCAGTCACCCAA 57.976 50.000 0.00 0.00 0.00 4.12
2914 3027 2.254152 ATTAGCTCCTCAGTCACCCA 57.746 50.000 0.00 0.00 0.00 4.51
2916 3029 6.116126 ACAAATTATTAGCTCCTCAGTCACC 58.884 40.000 0.00 0.00 0.00 4.02
2917 3030 7.414540 CCAACAAATTATTAGCTCCTCAGTCAC 60.415 40.741 0.00 0.00 0.00 3.67
2929 3050 6.266168 TCACCTGCACCAACAAATTATTAG 57.734 37.500 0.00 0.00 0.00 1.73
2930 3051 6.491745 TCTTCACCTGCACCAACAAATTATTA 59.508 34.615 0.00 0.00 0.00 0.98
2931 3052 5.304101 TCTTCACCTGCACCAACAAATTATT 59.696 36.000 0.00 0.00 0.00 1.40
2933 3054 4.211125 TCTTCACCTGCACCAACAAATTA 58.789 39.130 0.00 0.00 0.00 1.40
3010 3133 6.613233 ACGATATAAATCTCATCTCCGACAC 58.387 40.000 0.00 0.00 0.00 3.67
3065 3188 2.613595 TCAAAAGTATGCCGCTATGCTG 59.386 45.455 0.00 0.00 0.00 4.41
3097 3220 7.487829 ACATTATACACGTGAATTTGATTTGGC 59.512 33.333 25.01 0.00 0.00 4.52
3151 3290 0.034059 AGAGTTCGCTTGGACCACAG 59.966 55.000 0.00 0.00 0.00 3.66
3156 3295 4.379339 AGAATAGAGAGTTCGCTTGGAC 57.621 45.455 0.00 0.00 0.00 4.02
3178 3317 3.668386 TCGCAGAGAGCTCGTGAA 58.332 55.556 19.85 6.86 42.61 3.18
3230 3369 3.674997 TCACAAGTCTTTCATGCTACCC 58.325 45.455 0.00 0.00 0.00 3.69
3279 3418 8.986847 TCTGAAAAACGATACGTACCAATTTTA 58.013 29.630 0.00 0.00 39.99 1.52
3339 3479 2.169769 CCTGTTCCGTTCCCAGCTATAA 59.830 50.000 0.00 0.00 0.00 0.98
3361 3501 1.244019 GCCAAGTGCCAACCCAGTAG 61.244 60.000 0.00 0.00 0.00 2.57
3364 3504 2.521465 TGCCAAGTGCCAACCCAG 60.521 61.111 0.00 0.00 40.16 4.45
3365 3505 2.521465 CTGCCAAGTGCCAACCCA 60.521 61.111 0.00 0.00 40.16 4.51
3366 3506 2.521708 ACTGCCAAGTGCCAACCC 60.522 61.111 0.00 0.00 40.16 4.11
3367 3507 1.827789 TGACTGCCAAGTGCCAACC 60.828 57.895 0.00 0.00 40.16 3.77
3368 3508 1.360192 GTGACTGCCAAGTGCCAAC 59.640 57.895 0.00 0.00 40.16 3.77
3369 3509 1.077140 TGTGACTGCCAAGTGCCAA 60.077 52.632 0.00 0.00 40.16 4.52
3370 3510 1.526686 CTGTGACTGCCAAGTGCCA 60.527 57.895 0.00 0.00 40.16 4.92
3371 3511 1.103398 AACTGTGACTGCCAAGTGCC 61.103 55.000 0.00 0.00 40.16 5.01
3372 3512 0.740737 AAACTGTGACTGCCAAGTGC 59.259 50.000 0.00 0.00 36.52 4.40
3373 3513 2.942376 TGTAAACTGTGACTGCCAAGTG 59.058 45.455 0.00 0.00 36.52 3.16
3374 3514 3.275617 TGTAAACTGTGACTGCCAAGT 57.724 42.857 0.00 0.00 40.21 3.16
3375 3515 3.003689 CCTTGTAAACTGTGACTGCCAAG 59.996 47.826 0.00 0.00 0.00 3.61
3376 3516 2.948979 CCTTGTAAACTGTGACTGCCAA 59.051 45.455 0.00 0.00 0.00 4.52
3377 3517 2.092646 ACCTTGTAAACTGTGACTGCCA 60.093 45.455 0.00 0.00 0.00 4.92
3378 3518 2.290641 CACCTTGTAAACTGTGACTGCC 59.709 50.000 0.00 0.00 0.00 4.85
3379 3519 3.202906 TCACCTTGTAAACTGTGACTGC 58.797 45.455 0.00 0.00 33.09 4.40
3380 3520 6.183360 ACAATTCACCTTGTAAACTGTGACTG 60.183 38.462 0.00 0.00 37.58 3.51
3381 3521 5.885912 ACAATTCACCTTGTAAACTGTGACT 59.114 36.000 0.00 0.00 37.58 3.41
3382 3522 6.131544 ACAATTCACCTTGTAAACTGTGAC 57.868 37.500 0.00 0.00 37.58 3.67
3383 3523 6.824196 TGTACAATTCACCTTGTAAACTGTGA 59.176 34.615 0.00 0.00 41.80 3.58
3384 3524 7.022055 TGTACAATTCACCTTGTAAACTGTG 57.978 36.000 0.00 0.00 41.80 3.66
3385 3525 6.826741 ACTGTACAATTCACCTTGTAAACTGT 59.173 34.615 0.00 0.00 41.80 3.55
3386 3526 7.259290 ACTGTACAATTCACCTTGTAAACTG 57.741 36.000 0.00 0.00 41.80 3.16
3387 3527 8.999431 CATACTGTACAATTCACCTTGTAAACT 58.001 33.333 0.00 0.00 41.80 2.66
3388 3528 8.995220 TCATACTGTACAATTCACCTTGTAAAC 58.005 33.333 0.00 0.00 41.80 2.01
3389 3529 9.733556 ATCATACTGTACAATTCACCTTGTAAA 57.266 29.630 0.00 0.00 41.80 2.01
3390 3530 9.733556 AATCATACTGTACAATTCACCTTGTAA 57.266 29.630 0.00 0.00 41.80 2.41
3391 3531 9.733556 AAATCATACTGTACAATTCACCTTGTA 57.266 29.630 0.00 0.00 39.88 2.41
3392 3532 8.514594 CAAATCATACTGTACAATTCACCTTGT 58.485 33.333 0.00 0.00 41.95 3.16
3393 3533 8.514594 ACAAATCATACTGTACAATTCACCTTG 58.485 33.333 0.00 0.00 0.00 3.61
3394 3534 8.635765 ACAAATCATACTGTACAATTCACCTT 57.364 30.769 0.00 0.00 0.00 3.50
3395 3535 9.162764 GTACAAATCATACTGTACAATTCACCT 57.837 33.333 0.00 0.00 44.76 4.00
3396 3536 8.395633 GGTACAAATCATACTGTACAATTCACC 58.604 37.037 12.84 0.00 46.39 4.02
3397 3537 8.941977 TGGTACAAATCATACTGTACAATTCAC 58.058 33.333 12.84 0.00 46.39 3.18
3398 3538 8.941977 GTGGTACAAATCATACTGTACAATTCA 58.058 33.333 12.84 1.38 46.39 2.57
3399 3539 8.941977 TGTGGTACAAATCATACTGTACAATTC 58.058 33.333 12.84 0.00 46.39 2.17
3400 3540 8.856153 TGTGGTACAAATCATACTGTACAATT 57.144 30.769 12.84 0.00 46.39 2.32
3401 3541 7.552687 CCTGTGGTACAAATCATACTGTACAAT 59.447 37.037 12.84 0.00 46.39 2.71
3402 3542 6.876789 CCTGTGGTACAAATCATACTGTACAA 59.123 38.462 12.84 0.80 46.39 2.41
3403 3543 6.403049 CCTGTGGTACAAATCATACTGTACA 58.597 40.000 12.84 0.00 46.39 2.90
3404 3544 5.815740 CCCTGTGGTACAAATCATACTGTAC 59.184 44.000 0.00 4.20 44.16 2.90
3405 3545 5.628200 GCCCTGTGGTACAAATCATACTGTA 60.628 44.000 0.00 0.00 44.16 2.74
3406 3546 4.843728 CCCTGTGGTACAAATCATACTGT 58.156 43.478 0.00 0.00 44.16 3.55
3407 3547 3.627577 GCCCTGTGGTACAAATCATACTG 59.372 47.826 0.00 0.00 44.16 2.74
3408 3548 3.681594 CGCCCTGTGGTACAAATCATACT 60.682 47.826 0.00 0.00 44.16 2.12
3409 3549 2.612212 CGCCCTGTGGTACAAATCATAC 59.388 50.000 0.00 0.00 44.16 2.39
3410 3550 2.420827 CCGCCCTGTGGTACAAATCATA 60.421 50.000 0.00 0.00 44.16 2.15
3411 3551 1.681780 CCGCCCTGTGGTACAAATCAT 60.682 52.381 0.00 0.00 44.16 2.45
3412 3552 0.322098 CCGCCCTGTGGTACAAATCA 60.322 55.000 0.00 0.00 44.16 2.57
3413 3553 1.029947 CCCGCCCTGTGGTACAAATC 61.030 60.000 0.00 0.00 44.16 2.17
3414 3554 1.001393 CCCGCCCTGTGGTACAAAT 60.001 57.895 0.00 0.00 44.16 2.32
3415 3555 2.148052 TCCCGCCCTGTGGTACAAA 61.148 57.895 0.00 0.00 44.16 2.83
3416 3556 2.527123 TCCCGCCCTGTGGTACAA 60.527 61.111 0.00 0.00 44.16 2.41
3417 3557 3.315949 GTCCCGCCCTGTGGTACA 61.316 66.667 0.00 0.00 0.00 2.90
3418 3558 2.590114 AAGTCCCGCCCTGTGGTAC 61.590 63.158 0.00 0.00 0.00 3.34
3419 3559 2.203877 AAGTCCCGCCCTGTGGTA 60.204 61.111 0.00 0.00 0.00 3.25
3420 3560 3.953775 CAAGTCCCGCCCTGTGGT 61.954 66.667 0.00 0.00 0.00 4.16
3421 3561 4.722700 CCAAGTCCCGCCCTGTGG 62.723 72.222 0.00 0.00 0.00 4.17
3429 3569 2.281761 AACAGCAGCCAAGTCCCG 60.282 61.111 0.00 0.00 0.00 5.14
3430 3570 2.270986 CCAACAGCAGCCAAGTCCC 61.271 63.158 0.00 0.00 0.00 4.46
3431 3571 0.250727 TACCAACAGCAGCCAAGTCC 60.251 55.000 0.00 0.00 0.00 3.85
3432 3572 1.160137 CTACCAACAGCAGCCAAGTC 58.840 55.000 0.00 0.00 0.00 3.01
3433 3573 0.764890 TCTACCAACAGCAGCCAAGT 59.235 50.000 0.00 0.00 0.00 3.16
3434 3574 1.271054 ACTCTACCAACAGCAGCCAAG 60.271 52.381 0.00 0.00 0.00 3.61
3435 3575 0.764890 ACTCTACCAACAGCAGCCAA 59.235 50.000 0.00 0.00 0.00 4.52
3436 3576 0.035317 CACTCTACCAACAGCAGCCA 59.965 55.000 0.00 0.00 0.00 4.75
3437 3577 0.674895 CCACTCTACCAACAGCAGCC 60.675 60.000 0.00 0.00 0.00 4.85
3438 3578 0.321671 TCCACTCTACCAACAGCAGC 59.678 55.000 0.00 0.00 0.00 5.25
3439 3579 2.300152 TCTTCCACTCTACCAACAGCAG 59.700 50.000 0.00 0.00 0.00 4.24
3440 3580 2.300152 CTCTTCCACTCTACCAACAGCA 59.700 50.000 0.00 0.00 0.00 4.41
3441 3581 2.354203 CCTCTTCCACTCTACCAACAGC 60.354 54.545 0.00 0.00 0.00 4.40
3442 3582 3.165875 TCCTCTTCCACTCTACCAACAG 58.834 50.000 0.00 0.00 0.00 3.16
3443 3583 3.254093 TCCTCTTCCACTCTACCAACA 57.746 47.619 0.00 0.00 0.00 3.33
3444 3584 3.833070 TCTTCCTCTTCCACTCTACCAAC 59.167 47.826 0.00 0.00 0.00 3.77
3445 3585 4.090090 CTCTTCCTCTTCCACTCTACCAA 58.910 47.826 0.00 0.00 0.00 3.67
3446 3586 3.564571 CCTCTTCCTCTTCCACTCTACCA 60.565 52.174 0.00 0.00 0.00 3.25
3447 3587 3.028130 CCTCTTCCTCTTCCACTCTACC 58.972 54.545 0.00 0.00 0.00 3.18
3448 3588 3.951680 CTCCTCTTCCTCTTCCACTCTAC 59.048 52.174 0.00 0.00 0.00 2.59
3449 3589 3.626222 GCTCCTCTTCCTCTTCCACTCTA 60.626 52.174 0.00 0.00 0.00 2.43
3450 3590 2.888069 GCTCCTCTTCCTCTTCCACTCT 60.888 54.545 0.00 0.00 0.00 3.24
3451 3591 1.480545 GCTCCTCTTCCTCTTCCACTC 59.519 57.143 0.00 0.00 0.00 3.51
3452 3592 1.567357 GCTCCTCTTCCTCTTCCACT 58.433 55.000 0.00 0.00 0.00 4.00
3453 3593 0.174617 CGCTCCTCTTCCTCTTCCAC 59.825 60.000 0.00 0.00 0.00 4.02
3454 3594 0.251832 ACGCTCCTCTTCCTCTTCCA 60.252 55.000 0.00 0.00 0.00 3.53
3455 3595 0.174617 CACGCTCCTCTTCCTCTTCC 59.825 60.000 0.00 0.00 0.00 3.46
3456 3596 0.174617 CCACGCTCCTCTTCCTCTTC 59.825 60.000 0.00 0.00 0.00 2.87
3457 3597 1.893919 GCCACGCTCCTCTTCCTCTT 61.894 60.000 0.00 0.00 0.00 2.85
3458 3598 2.355193 GCCACGCTCCTCTTCCTCT 61.355 63.158 0.00 0.00 0.00 3.69
3459 3599 2.185608 GCCACGCTCCTCTTCCTC 59.814 66.667 0.00 0.00 0.00 3.71
3460 3600 3.394836 GGCCACGCTCCTCTTCCT 61.395 66.667 0.00 0.00 0.00 3.36
3461 3601 3.672295 CTGGCCACGCTCCTCTTCC 62.672 68.421 0.00 0.00 0.00 3.46
3462 3602 2.125350 CTGGCCACGCTCCTCTTC 60.125 66.667 0.00 0.00 0.00 2.87
3463 3603 4.400961 GCTGGCCACGCTCCTCTT 62.401 66.667 16.95 0.00 0.00 2.85
3465 3605 4.400961 AAGCTGGCCACGCTCCTC 62.401 66.667 24.11 0.50 36.56 3.71
3466 3606 4.400961 GAAGCTGGCCACGCTCCT 62.401 66.667 24.11 13.51 36.56 3.69
3472 3612 4.329545 TCCACCGAAGCTGGCCAC 62.330 66.667 0.00 0.00 0.00 5.01
3473 3613 4.020617 CTCCACCGAAGCTGGCCA 62.021 66.667 4.71 4.71 0.00 5.36
3474 3614 3.672295 CTCTCCACCGAAGCTGGCC 62.672 68.421 0.00 0.00 0.00 5.36
3475 3615 2.125350 CTCTCCACCGAAGCTGGC 60.125 66.667 0.00 0.00 0.00 4.85
3476 3616 2.125350 GCTCTCCACCGAAGCTGG 60.125 66.667 0.00 0.00 0.00 4.85
3477 3617 1.739562 GTGCTCTCCACCGAAGCTG 60.740 63.158 0.00 0.00 38.55 4.24
3478 3618 2.659610 GTGCTCTCCACCGAAGCT 59.340 61.111 0.00 0.00 38.55 3.74
3518 3658 2.954868 CGATTTCCGGTCCGAGCG 60.955 66.667 14.39 13.02 39.06 5.03
3538 3678 2.754658 TTCCCTCGGACTCGGAGC 60.755 66.667 4.58 0.00 36.95 4.70
3539 3679 2.776913 GCTTCCCTCGGACTCGGAG 61.777 68.421 2.83 2.83 36.95 4.63
3540 3680 2.754658 GCTTCCCTCGGACTCGGA 60.755 66.667 0.00 0.00 36.95 4.55
3541 3681 3.068691 TGCTTCCCTCGGACTCGG 61.069 66.667 0.00 0.00 36.95 4.63
3542 3682 2.182030 GTGCTTCCCTCGGACTCG 59.818 66.667 0.00 0.00 37.82 4.18
3543 3683 2.182030 CGTGCTTCCCTCGGACTC 59.818 66.667 0.00 0.00 0.00 3.36
3544 3684 4.070552 GCGTGCTTCCCTCGGACT 62.071 66.667 0.00 0.00 0.00 3.85
3549 3689 4.373116 TCGTGGCGTGCTTCCCTC 62.373 66.667 0.00 0.00 0.00 4.30
3550 3690 4.681978 GTCGTGGCGTGCTTCCCT 62.682 66.667 0.00 0.00 0.00 4.20
3552 3692 4.980805 TGGTCGTGGCGTGCTTCC 62.981 66.667 0.00 0.00 0.00 3.46
3553 3693 3.712881 GTGGTCGTGGCGTGCTTC 61.713 66.667 0.00 0.00 0.00 3.86
3565 3705 4.722700 ATGGCTGCCACGGTGGTC 62.723 66.667 25.99 19.18 40.46 4.02
3567 3707 4.720902 TCATGGCTGCCACGGTGG 62.721 66.667 25.99 22.87 41.55 4.61
3568 3708 0.747644 TATTCATGGCTGCCACGGTG 60.748 55.000 25.99 18.76 35.80 4.94
3569 3709 0.183492 ATATTCATGGCTGCCACGGT 59.817 50.000 25.99 11.05 35.80 4.83
3570 3710 1.806542 GTATATTCATGGCTGCCACGG 59.193 52.381 25.99 19.19 35.80 4.94
3571 3711 1.806542 GGTATATTCATGGCTGCCACG 59.193 52.381 25.99 17.53 35.80 4.94
3572 3712 3.146104 AGGTATATTCATGGCTGCCAC 57.854 47.619 25.99 8.39 35.80 5.01
3573 3713 3.009033 GGTAGGTATATTCATGGCTGCCA 59.991 47.826 25.65 25.65 38.19 4.92
3574 3714 3.610911 GGTAGGTATATTCATGGCTGCC 58.389 50.000 12.87 12.87 0.00 4.85
3575 3715 3.610911 GGGTAGGTATATTCATGGCTGC 58.389 50.000 0.00 0.00 0.00 5.25
3576 3716 3.369471 CCGGGTAGGTATATTCATGGCTG 60.369 52.174 0.00 0.00 34.51 4.85
3577 3717 2.838202 CCGGGTAGGTATATTCATGGCT 59.162 50.000 0.00 0.00 34.51 4.75
3578 3718 2.835764 TCCGGGTAGGTATATTCATGGC 59.164 50.000 0.00 0.00 41.99 4.40
3579 3719 3.451178 CCTCCGGGTAGGTATATTCATGG 59.549 52.174 0.00 0.00 41.99 3.66
3580 3720 3.451178 CCCTCCGGGTAGGTATATTCATG 59.549 52.174 0.00 0.00 41.99 3.07
3581 3721 3.338824 TCCCTCCGGGTAGGTATATTCAT 59.661 47.826 0.00 0.00 44.74 2.57
3582 3722 2.723563 TCCCTCCGGGTAGGTATATTCA 59.276 50.000 0.00 0.00 44.74 2.57
3583 3723 3.363627 CTCCCTCCGGGTAGGTATATTC 58.636 54.545 0.00 0.00 44.74 1.75
3584 3724 2.559252 GCTCCCTCCGGGTAGGTATATT 60.559 54.545 0.00 0.00 44.74 1.28
3585 3725 1.006878 GCTCCCTCCGGGTAGGTATAT 59.993 57.143 0.00 0.00 44.74 0.86
3586 3726 0.407139 GCTCCCTCCGGGTAGGTATA 59.593 60.000 0.00 0.00 44.74 1.47
3587 3727 1.155624 GCTCCCTCCGGGTAGGTAT 59.844 63.158 0.00 0.00 44.74 2.73
3588 3728 2.004408 GAGCTCCCTCCGGGTAGGTA 62.004 65.000 0.87 0.00 44.74 3.08
3589 3729 3.357082 AGCTCCCTCCGGGTAGGT 61.357 66.667 0.00 0.00 44.74 3.08
3590 3730 2.522193 GAGCTCCCTCCGGGTAGG 60.522 72.222 0.87 0.81 44.74 3.18
3591 3731 1.075896 AAGAGCTCCCTCCGGGTAG 60.076 63.158 10.93 0.00 44.74 3.18
3592 3732 1.076192 GAAGAGCTCCCTCCGGGTA 60.076 63.158 10.93 0.00 44.74 3.69
3593 3733 2.364448 GAAGAGCTCCCTCCGGGT 60.364 66.667 10.93 0.00 44.74 5.28
3594 3734 3.157949 GGAAGAGCTCCCTCCGGG 61.158 72.222 10.93 0.00 46.11 5.73
3595 3735 2.042435 AGGAAGAGCTCCCTCCGG 60.042 66.667 21.17 0.00 46.81 5.14
3596 3736 3.532501 GAGGAAGAGCTCCCTCCG 58.467 66.667 22.16 0.00 46.81 4.63
3598 3738 0.829990 CAAGGAGGAAGAGCTCCCTC 59.170 60.000 23.79 23.79 46.81 4.30
3599 3739 1.271127 GCAAGGAGGAAGAGCTCCCT 61.271 60.000 10.93 10.96 46.81 4.20
3600 3740 1.223211 GCAAGGAGGAAGAGCTCCC 59.777 63.158 10.93 5.39 46.81 4.30
3601 3741 0.326264 TTGCAAGGAGGAAGAGCTCC 59.674 55.000 10.93 0.00 45.81 4.70
3602 3742 2.083002 CTTTGCAAGGAGGAAGAGCTC 58.917 52.381 5.27 5.27 0.00 4.09
3603 3743 1.885790 GCTTTGCAAGGAGGAAGAGCT 60.886 52.381 13.48 0.00 32.88 4.09
3604 3744 0.525311 GCTTTGCAAGGAGGAAGAGC 59.475 55.000 13.48 6.23 0.00 4.09
3605 3745 2.197283 AGCTTTGCAAGGAGGAAGAG 57.803 50.000 13.48 0.00 0.00 2.85
3606 3746 2.624838 CAAAGCTTTGCAAGGAGGAAGA 59.375 45.455 25.26 0.00 0.00 2.87
3607 3747 2.288640 CCAAAGCTTTGCAAGGAGGAAG 60.289 50.000 29.93 11.24 36.86 3.46
3608 3748 1.688197 CCAAAGCTTTGCAAGGAGGAA 59.312 47.619 29.93 0.00 36.86 3.36
3609 3749 1.133513 TCCAAAGCTTTGCAAGGAGGA 60.134 47.619 29.93 18.63 36.86 3.71
3610 3750 1.271656 CTCCAAAGCTTTGCAAGGAGG 59.728 52.381 29.93 16.73 38.50 4.30
3611 3751 1.959282 ACTCCAAAGCTTTGCAAGGAG 59.041 47.619 28.77 28.77 43.50 3.69
3612 3752 2.071778 ACTCCAAAGCTTTGCAAGGA 57.928 45.000 29.93 21.30 36.86 3.36
3613 3753 2.896745 AACTCCAAAGCTTTGCAAGG 57.103 45.000 29.93 18.44 36.86 3.61
3636 3776 9.665719 AACTCCAAAGCTTTATCTTTTCAAAAA 57.334 25.926 12.25 0.00 34.31 1.94
3637 3777 9.097257 CAACTCCAAAGCTTTATCTTTTCAAAA 57.903 29.630 12.25 0.00 34.31 2.44
3638 3778 8.474025 TCAACTCCAAAGCTTTATCTTTTCAAA 58.526 29.630 12.25 0.00 34.31 2.69
3639 3779 8.006298 TCAACTCCAAAGCTTTATCTTTTCAA 57.994 30.769 12.25 0.00 34.31 2.69
3640 3780 7.581213 TCAACTCCAAAGCTTTATCTTTTCA 57.419 32.000 12.25 0.00 34.31 2.69
3641 3781 8.352942 TCTTCAACTCCAAAGCTTTATCTTTTC 58.647 33.333 12.25 0.00 34.31 2.29
3642 3782 8.237811 TCTTCAACTCCAAAGCTTTATCTTTT 57.762 30.769 12.25 0.00 34.31 2.27
3643 3783 7.823745 TCTTCAACTCCAAAGCTTTATCTTT 57.176 32.000 12.25 0.53 36.78 2.52
3644 3784 7.823745 TTCTTCAACTCCAAAGCTTTATCTT 57.176 32.000 12.25 0.00 0.00 2.40
3645 3785 7.449704 ACATTCTTCAACTCCAAAGCTTTATCT 59.550 33.333 12.25 0.00 0.00 1.98
3646 3786 7.597386 ACATTCTTCAACTCCAAAGCTTTATC 58.403 34.615 12.25 0.00 0.00 1.75
3647 3787 7.530426 ACATTCTTCAACTCCAAAGCTTTAT 57.470 32.000 12.25 0.00 0.00 1.40
3648 3788 6.959639 ACATTCTTCAACTCCAAAGCTTTA 57.040 33.333 12.25 0.00 0.00 1.85
3649 3789 5.859205 ACATTCTTCAACTCCAAAGCTTT 57.141 34.783 5.69 5.69 0.00 3.51
3650 3790 6.299141 TCTACATTCTTCAACTCCAAAGCTT 58.701 36.000 0.00 0.00 0.00 3.74
3651 3791 5.869579 TCTACATTCTTCAACTCCAAAGCT 58.130 37.500 0.00 0.00 0.00 3.74
3652 3792 6.348868 CCTTCTACATTCTTCAACTCCAAAGC 60.349 42.308 0.00 0.00 0.00 3.51
3653 3793 6.712547 ACCTTCTACATTCTTCAACTCCAAAG 59.287 38.462 0.00 0.00 0.00 2.77
3654 3794 6.486657 CACCTTCTACATTCTTCAACTCCAAA 59.513 38.462 0.00 0.00 0.00 3.28
3655 3795 5.997746 CACCTTCTACATTCTTCAACTCCAA 59.002 40.000 0.00 0.00 0.00 3.53
3656 3796 5.306937 TCACCTTCTACATTCTTCAACTCCA 59.693 40.000 0.00 0.00 0.00 3.86
3657 3797 5.794894 TCACCTTCTACATTCTTCAACTCC 58.205 41.667 0.00 0.00 0.00 3.85
3658 3798 6.692486 TCTCACCTTCTACATTCTTCAACTC 58.308 40.000 0.00 0.00 0.00 3.01
3659 3799 6.672266 TCTCACCTTCTACATTCTTCAACT 57.328 37.500 0.00 0.00 0.00 3.16
3660 3800 7.099764 TCATCTCACCTTCTACATTCTTCAAC 58.900 38.462 0.00 0.00 0.00 3.18
3661 3801 7.179160 TCTCATCTCACCTTCTACATTCTTCAA 59.821 37.037 0.00 0.00 0.00 2.69
3662 3802 6.665248 TCTCATCTCACCTTCTACATTCTTCA 59.335 38.462 0.00 0.00 0.00 3.02
3663 3803 7.106439 TCTCATCTCACCTTCTACATTCTTC 57.894 40.000 0.00 0.00 0.00 2.87
3664 3804 6.667414 ACTCTCATCTCACCTTCTACATTCTT 59.333 38.462 0.00 0.00 0.00 2.52
3665 3805 6.096705 CACTCTCATCTCACCTTCTACATTCT 59.903 42.308 0.00 0.00 0.00 2.40
3666 3806 6.272318 CACTCTCATCTCACCTTCTACATTC 58.728 44.000 0.00 0.00 0.00 2.67
3667 3807 5.395103 GCACTCTCATCTCACCTTCTACATT 60.395 44.000 0.00 0.00 0.00 2.71
3668 3808 4.099266 GCACTCTCATCTCACCTTCTACAT 59.901 45.833 0.00 0.00 0.00 2.29
3669 3809 3.445450 GCACTCTCATCTCACCTTCTACA 59.555 47.826 0.00 0.00 0.00 2.74
3670 3810 3.488384 CGCACTCTCATCTCACCTTCTAC 60.488 52.174 0.00 0.00 0.00 2.59
3671 3811 2.685388 CGCACTCTCATCTCACCTTCTA 59.315 50.000 0.00 0.00 0.00 2.10
3672 3812 1.476085 CGCACTCTCATCTCACCTTCT 59.524 52.381 0.00 0.00 0.00 2.85
3673 3813 1.474478 TCGCACTCTCATCTCACCTTC 59.526 52.381 0.00 0.00 0.00 3.46
3674 3814 1.476085 CTCGCACTCTCATCTCACCTT 59.524 52.381 0.00 0.00 0.00 3.50
3675 3815 1.102154 CTCGCACTCTCATCTCACCT 58.898 55.000 0.00 0.00 0.00 4.00
3676 3816 0.814457 ACTCGCACTCTCATCTCACC 59.186 55.000 0.00 0.00 0.00 4.02
3677 3817 1.468908 CCACTCGCACTCTCATCTCAC 60.469 57.143 0.00 0.00 0.00 3.51
3678 3818 0.813821 CCACTCGCACTCTCATCTCA 59.186 55.000 0.00 0.00 0.00 3.27
3679 3819 1.098869 TCCACTCGCACTCTCATCTC 58.901 55.000 0.00 0.00 0.00 2.75
3680 3820 1.550327 TTCCACTCGCACTCTCATCT 58.450 50.000 0.00 0.00 0.00 2.90
3681 3821 1.996191 GTTTCCACTCGCACTCTCATC 59.004 52.381 0.00 0.00 0.00 2.92
3682 3822 1.670087 CGTTTCCACTCGCACTCTCAT 60.670 52.381 0.00 0.00 0.00 2.90
3683 3823 0.318699 CGTTTCCACTCGCACTCTCA 60.319 55.000 0.00 0.00 0.00 3.27
3684 3824 1.009389 CCGTTTCCACTCGCACTCTC 61.009 60.000 0.00 0.00 0.00 3.20
3685 3825 1.006102 CCGTTTCCACTCGCACTCT 60.006 57.895 0.00 0.00 0.00 3.24
3686 3826 1.006571 TCCGTTTCCACTCGCACTC 60.007 57.895 0.00 0.00 0.00 3.51
3687 3827 1.006102 CTCCGTTTCCACTCGCACT 60.006 57.895 0.00 0.00 0.00 4.40
3688 3828 2.668280 GCTCCGTTTCCACTCGCAC 61.668 63.158 0.00 0.00 0.00 5.34
3689 3829 2.357034 GCTCCGTTTCCACTCGCA 60.357 61.111 0.00 0.00 0.00 5.10
3690 3830 2.357034 TGCTCCGTTTCCACTCGC 60.357 61.111 0.00 0.00 0.00 5.03
3691 3831 1.300620 TGTGCTCCGTTTCCACTCG 60.301 57.895 0.00 0.00 0.00 4.18
3692 3832 0.531974 TGTGTGCTCCGTTTCCACTC 60.532 55.000 0.00 0.00 0.00 3.51
3693 3833 1.524961 TGTGTGCTCCGTTTCCACT 59.475 52.632 0.00 0.00 0.00 4.00
3694 3834 4.134623 TGTGTGCTCCGTTTCCAC 57.865 55.556 0.00 0.00 0.00 4.02
3954 4094 8.811994 AGCTCTATTTTTCAGAGTTTAGAGAGT 58.188 33.333 8.54 0.00 41.39 3.24
3961 4101 8.796475 TGCAATTAGCTCTATTTTTCAGAGTTT 58.204 29.630 0.00 0.00 45.94 2.66
3962 4102 8.340618 TGCAATTAGCTCTATTTTTCAGAGTT 57.659 30.769 0.00 0.00 45.94 3.01
3963 4103 7.928307 TGCAATTAGCTCTATTTTTCAGAGT 57.072 32.000 0.00 0.00 45.94 3.24
3964 4104 8.838365 AGATGCAATTAGCTCTATTTTTCAGAG 58.162 33.333 0.00 0.00 45.94 3.35
3965 4105 8.743085 AGATGCAATTAGCTCTATTTTTCAGA 57.257 30.769 0.00 0.00 45.94 3.27
3971 4111 9.883142 GGACTATAGATGCAATTAGCTCTATTT 57.117 33.333 6.78 0.28 45.94 1.40
3972 4112 9.265862 AGGACTATAGATGCAATTAGCTCTATT 57.734 33.333 6.78 0.00 45.94 1.73
3973 4113 8.837099 AGGACTATAGATGCAATTAGCTCTAT 57.163 34.615 6.78 9.56 45.94 1.98
3974 4114 7.066404 CGAGGACTATAGATGCAATTAGCTCTA 59.934 40.741 6.78 0.00 45.94 2.43
3975 4115 6.127758 CGAGGACTATAGATGCAATTAGCTCT 60.128 42.308 6.78 0.00 45.94 4.09
3976 4116 6.033341 CGAGGACTATAGATGCAATTAGCTC 58.967 44.000 6.78 0.00 45.94 4.09
3977 4117 5.478679 ACGAGGACTATAGATGCAATTAGCT 59.521 40.000 6.78 0.00 45.94 3.32
3978 4118 5.715070 ACGAGGACTATAGATGCAATTAGC 58.285 41.667 6.78 0.00 45.96 3.09
3979 4119 8.046294 ACTACGAGGACTATAGATGCAATTAG 57.954 38.462 6.78 1.85 0.00 1.73
3980 4120 7.148457 CGACTACGAGGACTATAGATGCAATTA 60.148 40.741 6.78 0.00 42.66 1.40
3981 4121 6.348622 CGACTACGAGGACTATAGATGCAATT 60.349 42.308 6.78 0.00 42.66 2.32
3982 4122 5.122554 CGACTACGAGGACTATAGATGCAAT 59.877 44.000 6.78 0.00 42.66 3.56
3983 4123 4.451435 CGACTACGAGGACTATAGATGCAA 59.549 45.833 6.78 0.00 42.66 4.08
3984 4124 3.995048 CGACTACGAGGACTATAGATGCA 59.005 47.826 6.78 0.00 42.66 3.96
3985 4125 4.244066 TCGACTACGAGGACTATAGATGC 58.756 47.826 6.78 0.00 43.81 3.91
3999 4139 3.145212 TGGATGTTGTGATCGACTACG 57.855 47.619 0.00 0.00 41.26 3.51
4000 4140 4.495422 AGTTGGATGTTGTGATCGACTAC 58.505 43.478 0.00 0.00 0.00 2.73
4001 4141 4.801330 AGTTGGATGTTGTGATCGACTA 57.199 40.909 0.00 0.00 0.00 2.59
4002 4142 3.685139 AGTTGGATGTTGTGATCGACT 57.315 42.857 0.00 0.00 0.00 4.18
4003 4143 3.120199 CCAAGTTGGATGTTGTGATCGAC 60.120 47.826 17.60 0.00 40.96 4.20
4004 4144 3.073678 CCAAGTTGGATGTTGTGATCGA 58.926 45.455 17.60 0.00 40.96 3.59
4005 4145 2.813754 ACCAAGTTGGATGTTGTGATCG 59.186 45.455 28.80 0.00 40.96 3.69
4006 4146 3.820467 TGACCAAGTTGGATGTTGTGATC 59.180 43.478 28.80 12.11 40.96 2.92
4007 4147 3.831323 TGACCAAGTTGGATGTTGTGAT 58.169 40.909 28.80 1.88 40.96 3.06
4008 4148 3.289407 TGACCAAGTTGGATGTTGTGA 57.711 42.857 28.80 0.00 40.96 3.58
4009 4149 3.305539 CCATGACCAAGTTGGATGTTGTG 60.306 47.826 28.80 15.63 40.96 3.33
4010 4150 2.892852 CCATGACCAAGTTGGATGTTGT 59.107 45.455 28.80 4.34 40.96 3.32
4011 4151 3.156293 TCCATGACCAAGTTGGATGTTG 58.844 45.455 28.80 17.56 40.96 3.33
4012 4152 3.424703 CTCCATGACCAAGTTGGATGTT 58.575 45.455 28.80 5.59 40.96 2.71
4013 4153 2.291153 CCTCCATGACCAAGTTGGATGT 60.291 50.000 28.80 6.00 40.96 3.06
4014 4154 2.291153 ACCTCCATGACCAAGTTGGATG 60.291 50.000 28.80 20.40 40.96 3.51
4015 4155 1.995542 ACCTCCATGACCAAGTTGGAT 59.004 47.619 28.80 12.53 40.96 3.41
4016 4156 1.444933 ACCTCCATGACCAAGTTGGA 58.555 50.000 28.80 7.38 40.96 3.53
4017 4157 1.888512 CAACCTCCATGACCAAGTTGG 59.111 52.381 20.76 20.76 45.02 3.77
4018 4158 2.586425 ACAACCTCCATGACCAAGTTG 58.414 47.619 0.00 3.58 40.24 3.16
4019 4159 4.447138 TTACAACCTCCATGACCAAGTT 57.553 40.909 0.00 0.00 0.00 2.66
4020 4160 4.141251 ACTTTACAACCTCCATGACCAAGT 60.141 41.667 0.00 0.00 0.00 3.16
4021 4161 4.216257 CACTTTACAACCTCCATGACCAAG 59.784 45.833 0.00 0.00 0.00 3.61
4022 4162 4.141287 CACTTTACAACCTCCATGACCAA 58.859 43.478 0.00 0.00 0.00 3.67
4023 4163 3.750371 CACTTTACAACCTCCATGACCA 58.250 45.455 0.00 0.00 0.00 4.02
4024 4164 2.488153 GCACTTTACAACCTCCATGACC 59.512 50.000 0.00 0.00 0.00 4.02
4025 4165 3.412386 AGCACTTTACAACCTCCATGAC 58.588 45.455 0.00 0.00 0.00 3.06
4026 4166 3.559171 GGAGCACTTTACAACCTCCATGA 60.559 47.826 0.00 0.00 41.31 3.07
4027 4167 2.749621 GGAGCACTTTACAACCTCCATG 59.250 50.000 0.00 0.00 41.31 3.66
4028 4168 2.375174 TGGAGCACTTTACAACCTCCAT 59.625 45.455 3.71 0.00 45.13 3.41
4029 4169 2.561478 GGAGCACTTTACAACCTCCA 57.439 50.000 0.00 0.00 41.31 3.86
4030 4170 2.561478 TGGAGCACTTTACAACCTCC 57.439 50.000 0.00 0.00 41.87 4.30
4031 4171 4.092968 CGTATTGGAGCACTTTACAACCTC 59.907 45.833 0.00 0.00 0.00 3.85
4032 4172 4.000988 CGTATTGGAGCACTTTACAACCT 58.999 43.478 0.00 0.00 0.00 3.50
4033 4173 3.126343 CCGTATTGGAGCACTTTACAACC 59.874 47.826 0.00 0.00 42.00 3.77
4034 4174 3.749609 ACCGTATTGGAGCACTTTACAAC 59.250 43.478 0.00 0.00 42.00 3.32
4035 4175 3.998341 GACCGTATTGGAGCACTTTACAA 59.002 43.478 0.00 0.00 42.00 2.41
4036 4176 3.592059 GACCGTATTGGAGCACTTTACA 58.408 45.455 0.00 0.00 42.00 2.41
4037 4177 2.934553 GGACCGTATTGGAGCACTTTAC 59.065 50.000 0.00 0.00 42.00 2.01
4038 4178 2.093341 GGGACCGTATTGGAGCACTTTA 60.093 50.000 0.00 0.00 42.00 1.85
4039 4179 1.339727 GGGACCGTATTGGAGCACTTT 60.340 52.381 0.00 0.00 42.00 2.66
4040 4180 0.252197 GGGACCGTATTGGAGCACTT 59.748 55.000 0.00 0.00 42.00 3.16
4041 4181 1.905512 GGGACCGTATTGGAGCACT 59.094 57.895 0.00 0.00 42.00 4.40
4042 4182 1.520787 CGGGACCGTATTGGAGCAC 60.521 63.158 1.86 0.00 42.00 4.40
4043 4183 2.727392 CCGGGACCGTATTGGAGCA 61.727 63.158 10.17 0.00 42.00 4.26
4044 4184 1.394266 TACCGGGACCGTATTGGAGC 61.394 60.000 6.32 0.00 42.00 4.70
4045 4185 0.386838 GTACCGGGACCGTATTGGAG 59.613 60.000 5.10 0.00 42.00 3.86
4046 4186 0.324183 TGTACCGGGACCGTATTGGA 60.324 55.000 16.09 0.00 42.00 3.53
4047 4187 0.754472 ATGTACCGGGACCGTATTGG 59.246 55.000 16.09 0.00 46.41 3.16
4048 4188 1.860676 CATGTACCGGGACCGTATTG 58.139 55.000 16.09 0.17 37.81 1.90
4049 4189 0.105408 GCATGTACCGGGACCGTATT 59.895 55.000 16.09 0.00 37.81 1.89
4050 4190 1.044231 TGCATGTACCGGGACCGTAT 61.044 55.000 16.09 0.00 37.81 3.06
4051 4191 1.256361 TTGCATGTACCGGGACCGTA 61.256 55.000 16.09 1.53 37.81 4.02
4052 4192 2.114488 TTTGCATGTACCGGGACCGT 62.114 55.000 16.09 0.00 37.81 4.83
4053 4193 0.746563 ATTTGCATGTACCGGGACCG 60.747 55.000 16.09 6.67 39.44 4.79
4054 4194 2.335316 TATTTGCATGTACCGGGACC 57.665 50.000 16.09 0.00 0.00 4.46
4055 4195 3.003275 CACATATTTGCATGTACCGGGAC 59.997 47.826 10.93 10.93 37.02 4.46
4056 4196 3.118223 TCACATATTTGCATGTACCGGGA 60.118 43.478 6.32 0.00 37.02 5.14
4057 4197 3.210227 TCACATATTTGCATGTACCGGG 58.790 45.455 6.32 0.00 37.02 5.73
4058 4198 4.514816 TGATCACATATTTGCATGTACCGG 59.485 41.667 0.00 0.00 37.02 5.28
4059 4199 5.671742 TGATCACATATTTGCATGTACCG 57.328 39.130 0.00 0.00 37.02 4.02
4060 4200 8.567104 TGTATTGATCACATATTTGCATGTACC 58.433 33.333 0.00 0.00 37.02 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.