Multiple sequence alignment - TraesCS3A01G161300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G161300 chr3A 100.000 5910 0 0 1 5910 162766197 162760288 0.000000e+00 10914.0
1 TraesCS3A01G161300 chr3A 91.322 242 21 0 23 264 631340692 631340933 1.230000e-86 331.0
2 TraesCS3A01G161300 chr3A 78.947 247 49 2 5184 5430 610055581 610055824 1.320000e-36 165.0
3 TraesCS3A01G161300 chr3A 86.885 61 1 2 268 328 162765738 162765685 1.780000e-05 62.1
4 TraesCS3A01G161300 chr3A 86.885 61 1 2 460 513 162765930 162765870 1.780000e-05 62.1
5 TraesCS3A01G161300 chr3D 95.022 4540 124 27 458 4959 143148706 143144231 0.000000e+00 7038.0
6 TraesCS3A01G161300 chr3D 92.562 242 18 0 24 265 327516846 327517087 1.220000e-91 348.0
7 TraesCS3A01G161300 chr3D 77.681 345 64 13 5182 5519 74335865 74335527 1.300000e-46 198.0
8 TraesCS3A01G161300 chr3D 90.411 146 12 2 318 461 575094192 575094047 2.170000e-44 191.0
9 TraesCS3A01G161300 chr3D 75.741 371 70 13 5310 5674 547445799 547446155 1.020000e-37 169.0
10 TraesCS3A01G161300 chr3D 92.958 71 5 0 4998 5068 143144227 143144157 2.910000e-18 104.0
11 TraesCS3A01G161300 chr3D 90.667 75 6 1 5067 5140 143144092 143144018 1.360000e-16 99.0
12 TraesCS3A01G161300 chr3D 78.832 137 26 3 5689 5824 143143345 143143211 8.160000e-14 89.8
13 TraesCS3A01G161300 chr3D 75.781 128 25 4 5700 5826 576760567 576760445 6.400000e-05 60.2
14 TraesCS3A01G161300 chr3D 96.875 32 1 0 297 328 143148682 143148651 3.000000e-03 54.7
15 TraesCS3A01G161300 chr3B 95.150 2866 95 17 2502 5328 206195545 206192685 0.000000e+00 4482.0
16 TraesCS3A01G161300 chr3B 92.037 2072 78 34 443 2471 206197557 206195530 0.000000e+00 2832.0
17 TraesCS3A01G161300 chr3B 90.741 378 32 3 5534 5910 206191750 206191375 8.840000e-138 501.0
18 TraesCS3A01G161300 chr3B 75.620 484 97 15 5195 5665 570973714 570974189 2.770000e-53 220.0
19 TraesCS3A01G161300 chr3B 74.194 403 75 12 5279 5672 703029934 703029552 2.220000e-29 141.0
20 TraesCS3A01G161300 chr1A 93.361 241 16 0 24 264 34863170 34862930 2.030000e-94 357.0
21 TraesCS3A01G161300 chr1A 92.701 137 8 2 318 452 13798983 13799119 4.670000e-46 196.0
22 TraesCS3A01G161300 chr1A 87.218 133 14 3 5695 5826 521288217 521288087 1.330000e-31 148.0
23 TraesCS3A01G161300 chr4A 92.116 241 19 0 24 264 617039547 617039787 2.040000e-89 340.0
24 TraesCS3A01G161300 chr4A 77.523 436 82 12 5248 5674 55374489 55374061 1.270000e-61 248.0
25 TraesCS3A01G161300 chr4A 85.542 83 11 1 5348 5430 678079457 678079376 1.060000e-12 86.1
26 TraesCS3A01G161300 chr6D 91.093 247 22 0 22 268 149882156 149882402 9.490000e-88 335.0
27 TraesCS3A01G161300 chr6D 93.233 133 6 3 318 447 412630808 412630676 6.040000e-45 193.0
28 TraesCS3A01G161300 chr6D 82.014 139 21 4 5688 5824 433644244 433644108 1.350000e-21 115.0
29 TraesCS3A01G161300 chr6A 91.393 244 21 0 21 264 135366291 135366534 9.490000e-88 335.0
30 TraesCS3A01G161300 chr6A 94.697 132 3 4 318 445 121662591 121662460 1.000000e-47 202.0
31 TraesCS3A01G161300 chr2A 91.701 241 20 0 24 264 431692983 431692743 9.490000e-88 335.0
32 TraesCS3A01G161300 chr2A 96.094 128 4 1 318 444 209242936 209242809 2.160000e-49 207.0
33 TraesCS3A01G161300 chr2A 91.096 146 7 6 322 461 639693320 639693175 6.040000e-45 193.0
34 TraesCS3A01G161300 chr7A 90.361 249 23 1 24 272 271157045 271157292 5.710000e-85 326.0
35 TraesCS3A01G161300 chr2B 89.535 258 25 2 13 269 579385807 579385551 5.710000e-85 326.0
36 TraesCS3A01G161300 chr2B 86.992 123 14 2 5700 5821 380306028 380306149 2.870000e-28 137.0
37 TraesCS3A01G161300 chr7B 77.295 414 77 13 5272 5674 12963312 12963719 1.660000e-55 228.0
38 TraesCS3A01G161300 chr7B 82.877 146 22 3 5682 5826 163488832 163488975 1.730000e-25 128.0
39 TraesCS3A01G161300 chr4D 77.030 431 76 11 5264 5674 392504498 392504925 5.960000e-55 226.0
40 TraesCS3A01G161300 chr5A 94.030 134 7 1 318 450 64980637 64980504 1.000000e-47 202.0
41 TraesCS3A01G161300 chr5A 95.312 128 5 1 318 444 218990036 218990163 1.000000e-47 202.0
42 TraesCS3A01G161300 chr5A 92.701 137 8 2 318 452 683947150 683947286 4.670000e-46 196.0
43 TraesCS3A01G161300 chr5A 75.434 403 82 13 5280 5674 177599067 177598674 4.710000e-41 180.0
44 TraesCS3A01G161300 chr7D 75.452 387 57 19 5261 5637 467986652 467987010 2.850000e-33 154.0
45 TraesCS3A01G161300 chr7D 85.000 140 19 2 5688 5826 199356114 199356252 2.220000e-29 141.0
46 TraesCS3A01G161300 chr7D 82.119 151 20 3 5682 5826 565196240 565196389 8.040000e-24 122.0
47 TraesCS3A01G161300 chr7D 80.272 147 26 3 5682 5826 570445374 570445519 2.250000e-19 108.0
48 TraesCS3A01G161300 chr5B 86.667 135 16 2 5268 5402 18693782 18693650 1.330000e-31 148.0
49 TraesCS3A01G161300 chr1D 87.603 121 13 2 5706 5825 426173451 426173332 7.990000e-29 139.0
50 TraesCS3A01G161300 chr1D 84.962 133 18 2 5695 5826 377205246 377205377 3.720000e-27 134.0
51 TraesCS3A01G161300 chr1D 80.556 108 19 2 5682 5788 377201219 377201325 1.370000e-11 82.4
52 TraesCS3A01G161300 chr1B 82.517 143 22 3 5689 5829 400369131 400368990 8.040000e-24 122.0
53 TraesCS3A01G161300 chr1B 73.899 318 69 8 5367 5675 504242503 504242815 1.350000e-21 115.0
54 TraesCS3A01G161300 chr2D 80.556 144 25 3 5682 5824 44940414 44940555 2.250000e-19 108.0
55 TraesCS3A01G161300 chr4B 89.610 77 6 2 5751 5826 392365463 392365538 4.880000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G161300 chr3A 162760288 162766197 5909 True 3679.4 10914 91.256667 1 5910 3 chr3A.!!$R1 5909
1 TraesCS3A01G161300 chr3D 143143211 143148706 5495 True 1477.1 7038 90.870800 297 5824 5 chr3D.!!$R4 5527
2 TraesCS3A01G161300 chr3B 206191375 206197557 6182 True 2605.0 4482 92.642667 443 5910 3 chr3B.!!$R2 5467


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
391 392 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.0 0.00 4.02 F
418 419 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.0 46.56 4.01 F
1314 1321 0.456312 GTTCTCTACCGCCACGTCTG 60.456 60.000 0.00 0.0 0.00 3.51 F
3192 3251 1.002430 GCATCCCTCACTGAACTGTCA 59.998 52.381 0.00 0.0 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1708 1727 2.299993 TCACTGCAAGATCGATCCAC 57.700 50.000 21.66 11.81 37.43 4.02 R
1709 1728 3.548745 AATCACTGCAAGATCGATCCA 57.451 42.857 21.66 11.70 37.43 3.41 R
3295 3354 2.663826 AAGATGAGGAGTCAAGCGAC 57.336 50.000 0.00 0.00 42.95 5.19 R
5124 5289 0.179081 GGTCGAGATGCCCTAACACC 60.179 60.000 0.00 0.00 0.00 4.16 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.874744 GTTTCCAGAGACCTAATACATCTTAC 57.125 38.462 0.00 0.00 0.00 2.34
26 27 8.697292 GTTTCCAGAGACCTAATACATCTTACT 58.303 37.037 0.00 0.00 0.00 2.24
27 28 8.466617 TTCCAGAGACCTAATACATCTTACTC 57.533 38.462 0.00 0.00 0.00 2.59
28 29 7.005296 TCCAGAGACCTAATACATCTTACTCC 58.995 42.308 0.00 0.00 0.00 3.85
29 30 6.209788 CCAGAGACCTAATACATCTTACTCCC 59.790 46.154 0.00 0.00 0.00 4.30
30 31 7.007723 CAGAGACCTAATACATCTTACTCCCT 58.992 42.308 0.00 0.00 0.00 4.20
31 32 7.175990 CAGAGACCTAATACATCTTACTCCCTC 59.824 44.444 0.00 0.00 0.00 4.30
32 33 6.316513 AGACCTAATACATCTTACTCCCTCC 58.683 44.000 0.00 0.00 0.00 4.30
33 34 6.104990 AGACCTAATACATCTTACTCCCTCCT 59.895 42.308 0.00 0.00 0.00 3.69
34 35 6.694611 ACCTAATACATCTTACTCCCTCCTT 58.305 40.000 0.00 0.00 0.00 3.36
35 36 6.783482 ACCTAATACATCTTACTCCCTCCTTC 59.217 42.308 0.00 0.00 0.00 3.46
36 37 6.211785 CCTAATACATCTTACTCCCTCCTTCC 59.788 46.154 0.00 0.00 0.00 3.46
37 38 3.491766 ACATCTTACTCCCTCCTTCCA 57.508 47.619 0.00 0.00 0.00 3.53
38 39 4.014273 ACATCTTACTCCCTCCTTCCAT 57.986 45.455 0.00 0.00 0.00 3.41
39 40 3.970640 ACATCTTACTCCCTCCTTCCATC 59.029 47.826 0.00 0.00 0.00 3.51
40 41 4.230455 CATCTTACTCCCTCCTTCCATCT 58.770 47.826 0.00 0.00 0.00 2.90
41 42 5.103043 ACATCTTACTCCCTCCTTCCATCTA 60.103 44.000 0.00 0.00 0.00 1.98
42 43 5.688220 TCTTACTCCCTCCTTCCATCTAT 57.312 43.478 0.00 0.00 0.00 1.98
43 44 6.798544 TCTTACTCCCTCCTTCCATCTATA 57.201 41.667 0.00 0.00 0.00 1.31
44 45 7.363759 TCTTACTCCCTCCTTCCATCTATAT 57.636 40.000 0.00 0.00 0.00 0.86
45 46 8.478214 TCTTACTCCCTCCTTCCATCTATATA 57.522 38.462 0.00 0.00 0.00 0.86
46 47 8.561769 TCTTACTCCCTCCTTCCATCTATATAG 58.438 40.741 3.10 3.10 0.00 1.31
47 48 6.098716 ACTCCCTCCTTCCATCTATATAGG 57.901 45.833 9.89 0.00 0.00 2.57
48 49 5.042979 ACTCCCTCCTTCCATCTATATAGGG 60.043 48.000 9.89 4.49 43.23 3.53
49 50 3.970640 CCCTCCTTCCATCTATATAGGGC 59.029 52.174 9.89 0.00 36.30 5.19
50 51 3.970640 CCTCCTTCCATCTATATAGGGCC 59.029 52.174 9.89 0.00 0.00 5.80
51 52 4.327332 CCTCCTTCCATCTATATAGGGCCT 60.327 50.000 12.58 12.58 0.00 5.19
52 53 5.103043 CCTCCTTCCATCTATATAGGGCCTA 60.103 48.000 17.16 17.16 0.00 3.93
53 54 6.432190 TCCTTCCATCTATATAGGGCCTAA 57.568 41.667 18.91 7.61 0.00 2.69
54 55 7.009960 TCCTTCCATCTATATAGGGCCTAAT 57.990 40.000 18.91 14.19 0.00 1.73
55 56 8.138306 TCCTTCCATCTATATAGGGCCTAATA 57.862 38.462 18.91 14.53 0.00 0.98
56 57 8.011290 TCCTTCCATCTATATAGGGCCTAATAC 58.989 40.741 18.91 0.00 0.00 1.89
57 58 8.013667 CCTTCCATCTATATAGGGCCTAATACT 58.986 40.741 18.91 3.18 0.00 2.12
58 59 9.440761 CTTCCATCTATATAGGGCCTAATACTT 57.559 37.037 18.91 2.76 0.00 2.24
59 60 9.799223 TTCCATCTATATAGGGCCTAATACTTT 57.201 33.333 18.91 1.94 0.00 2.66
60 61 9.799223 TCCATCTATATAGGGCCTAATACTTTT 57.201 33.333 18.91 1.12 0.00 2.27
82 83 7.562454 TTTTTCAAGACCGTCTTTGACTATT 57.438 32.000 11.24 0.00 33.78 1.73
83 84 6.539649 TTTCAAGACCGTCTTTGACTATTG 57.460 37.500 11.24 0.00 33.78 1.90
84 85 5.462530 TCAAGACCGTCTTTGACTATTGA 57.537 39.130 11.24 1.39 33.78 2.57
85 86 5.227908 TCAAGACCGTCTTTGACTATTGAC 58.772 41.667 11.24 0.00 33.78 3.18
86 87 4.866508 AGACCGTCTTTGACTATTGACA 57.133 40.909 0.00 0.00 0.00 3.58
87 88 5.209818 AGACCGTCTTTGACTATTGACAA 57.790 39.130 0.00 0.00 0.00 3.18
88 89 5.230942 AGACCGTCTTTGACTATTGACAAG 58.769 41.667 0.00 0.00 0.00 3.16
89 90 5.010719 AGACCGTCTTTGACTATTGACAAGA 59.989 40.000 0.00 0.00 0.00 3.02
90 91 5.794894 ACCGTCTTTGACTATTGACAAGAT 58.205 37.500 0.00 0.00 0.00 2.40
91 92 6.231211 ACCGTCTTTGACTATTGACAAGATT 58.769 36.000 0.00 0.00 0.00 2.40
92 93 7.383687 ACCGTCTTTGACTATTGACAAGATTA 58.616 34.615 0.00 0.00 0.00 1.75
93 94 7.876068 ACCGTCTTTGACTATTGACAAGATTAA 59.124 33.333 0.00 0.00 0.00 1.40
94 95 8.883731 CCGTCTTTGACTATTGACAAGATTAAT 58.116 33.333 0.00 0.00 0.00 1.40
108 109 9.045223 TGACAAGATTAATAGTACATGACATGC 57.955 33.333 15.49 0.11 0.00 4.06
109 110 8.962884 ACAAGATTAATAGTACATGACATGCA 57.037 30.769 15.49 0.00 0.00 3.96
110 111 9.565090 ACAAGATTAATAGTACATGACATGCAT 57.435 29.630 15.49 0.00 37.85 3.96
150 151 8.955061 ATCATTGAAAGTTTCTTTCACATACG 57.045 30.769 19.92 10.04 38.05 3.06
151 152 8.148807 TCATTGAAAGTTTCTTTCACATACGA 57.851 30.769 19.92 11.60 38.05 3.43
152 153 8.616942 TCATTGAAAGTTTCTTTCACATACGAA 58.383 29.630 19.92 8.15 38.05 3.85
153 154 9.398170 CATTGAAAGTTTCTTTCACATACGAAT 57.602 29.630 19.92 9.69 38.05 3.34
154 155 9.965824 ATTGAAAGTTTCTTTCACATACGAATT 57.034 25.926 19.92 0.00 38.05 2.17
155 156 9.796120 TTGAAAGTTTCTTTCACATACGAATTT 57.204 25.926 19.92 0.00 38.05 1.82
156 157 9.232082 TGAAAGTTTCTTTCACATACGAATTTG 57.768 29.630 16.33 0.00 33.90 2.32
157 158 9.445786 GAAAGTTTCTTTCACATACGAATTTGA 57.554 29.630 8.41 0.00 0.00 2.69
158 159 8.782533 AAGTTTCTTTCACATACGAATTTGAC 57.217 30.769 0.00 0.00 0.00 3.18
159 160 7.069569 AGTTTCTTTCACATACGAATTTGACG 58.930 34.615 0.00 0.00 0.00 4.35
160 161 6.772770 TTCTTTCACATACGAATTTGACGA 57.227 33.333 0.00 0.00 34.70 4.20
161 162 6.961359 TCTTTCACATACGAATTTGACGAT 57.039 33.333 0.00 0.00 34.70 3.73
162 163 6.761117 TCTTTCACATACGAATTTGACGATG 58.239 36.000 0.00 3.05 34.70 3.84
163 164 6.367695 TCTTTCACATACGAATTTGACGATGT 59.632 34.615 0.00 3.64 34.61 3.06
164 165 7.542824 TCTTTCACATACGAATTTGACGATGTA 59.457 33.333 0.00 0.00 33.79 2.29
165 166 6.563398 TCACATACGAATTTGACGATGTAC 57.437 37.500 0.00 0.00 33.79 2.90
166 167 6.327154 TCACATACGAATTTGACGATGTACT 58.673 36.000 0.00 0.00 33.79 2.73
167 168 6.809689 TCACATACGAATTTGACGATGTACTT 59.190 34.615 0.00 0.00 33.79 2.24
168 169 7.329962 TCACATACGAATTTGACGATGTACTTT 59.670 33.333 0.00 0.00 33.79 2.66
169 170 7.422462 CACATACGAATTTGACGATGTACTTTG 59.578 37.037 0.00 0.00 33.79 2.77
170 171 5.917541 ACGAATTTGACGATGTACTTTGT 57.082 34.783 0.00 1.33 34.70 2.83
171 172 5.675970 ACGAATTTGACGATGTACTTTGTG 58.324 37.500 6.38 0.00 34.70 3.33
172 173 5.235616 ACGAATTTGACGATGTACTTTGTGT 59.764 36.000 6.38 0.00 34.70 3.72
173 174 6.421501 ACGAATTTGACGATGTACTTTGTGTA 59.578 34.615 6.38 0.00 34.70 2.90
174 175 7.042590 ACGAATTTGACGATGTACTTTGTGTAA 60.043 33.333 6.38 1.80 32.30 2.41
175 176 7.794810 CGAATTTGACGATGTACTTTGTGTAAA 59.205 33.333 6.38 8.02 32.25 2.01
176 177 9.607285 GAATTTGACGATGTACTTTGTGTAAAT 57.393 29.630 6.38 9.58 32.00 1.40
177 178 9.959749 AATTTGACGATGTACTTTGTGTAAATT 57.040 25.926 17.47 17.47 29.58 1.82
179 180 9.866936 TTTGACGATGTACTTTGTGTAAATTAC 57.133 29.630 6.38 0.00 34.39 1.89
180 181 8.590719 TGACGATGTACTTTGTGTAAATTACA 57.409 30.769 6.38 1.08 42.40 2.41
181 182 9.210329 TGACGATGTACTTTGTGTAAATTACAT 57.790 29.630 9.22 12.55 46.50 2.29
182 183 9.472995 GACGATGTACTTTGTGTAAATTACATG 57.527 33.333 9.22 11.86 45.15 3.21
183 184 8.995220 ACGATGTACTTTGTGTAAATTACATGT 58.005 29.630 9.22 2.69 45.15 3.21
184 185 9.472995 CGATGTACTTTGTGTAAATTACATGTC 57.527 33.333 9.22 0.00 45.15 3.06
187 188 9.549078 TGTACTTTGTGTAAATTACATGTCAGA 57.451 29.630 9.22 0.00 41.34 3.27
220 221 9.418045 TGCTTTAACATTTGATAAAAGTTAGCC 57.582 29.630 11.44 3.84 36.36 3.93
221 222 9.639601 GCTTTAACATTTGATAAAAGTTAGCCT 57.360 29.630 0.00 0.00 36.36 4.58
261 262 9.265862 AGACCTTATATAGATGAAAGGATGGAG 57.734 37.037 6.01 0.00 40.85 3.86
262 263 8.980832 ACCTTATATAGATGAAAGGATGGAGT 57.019 34.615 6.01 0.00 40.85 3.85
267 268 8.727100 ATATAGATGAAAGGATGGAGTACACA 57.273 34.615 0.00 0.00 0.00 3.72
268 269 5.762179 AGATGAAAGGATGGAGTACACAA 57.238 39.130 0.00 0.00 0.00 3.33
269 270 5.738909 AGATGAAAGGATGGAGTACACAAG 58.261 41.667 0.00 0.00 0.00 3.16
270 271 4.974645 TGAAAGGATGGAGTACACAAGT 57.025 40.909 0.00 0.00 0.00 3.16
271 272 5.304686 TGAAAGGATGGAGTACACAAGTT 57.695 39.130 0.00 0.00 0.00 2.66
272 273 5.690865 TGAAAGGATGGAGTACACAAGTTT 58.309 37.500 0.00 0.00 0.00 2.66
273 274 6.833041 TGAAAGGATGGAGTACACAAGTTTA 58.167 36.000 0.00 0.00 0.00 2.01
274 275 6.708949 TGAAAGGATGGAGTACACAAGTTTAC 59.291 38.462 0.00 0.00 0.00 2.01
275 276 5.818678 AGGATGGAGTACACAAGTTTACA 57.181 39.130 0.00 0.00 0.00 2.41
276 277 5.794894 AGGATGGAGTACACAAGTTTACAG 58.205 41.667 0.00 0.00 0.00 2.74
277 278 5.542635 AGGATGGAGTACACAAGTTTACAGA 59.457 40.000 0.00 0.00 0.00 3.41
278 279 5.869888 GGATGGAGTACACAAGTTTACAGAG 59.130 44.000 0.00 0.00 0.00 3.35
279 280 5.209818 TGGAGTACACAAGTTTACAGAGG 57.790 43.478 0.00 0.00 0.00 3.69
280 281 4.039973 TGGAGTACACAAGTTTACAGAGGG 59.960 45.833 0.00 0.00 0.00 4.30
281 282 4.282703 GGAGTACACAAGTTTACAGAGGGA 59.717 45.833 0.00 0.00 0.00 4.20
282 283 5.221581 GGAGTACACAAGTTTACAGAGGGAA 60.222 44.000 0.00 0.00 0.00 3.97
283 284 6.435292 AGTACACAAGTTTACAGAGGGAAT 57.565 37.500 0.00 0.00 0.00 3.01
284 285 7.310237 GGAGTACACAAGTTTACAGAGGGAATA 60.310 40.741 0.00 0.00 0.00 1.75
285 286 8.147244 AGTACACAAGTTTACAGAGGGAATAT 57.853 34.615 0.00 0.00 0.00 1.28
286 287 8.258708 AGTACACAAGTTTACAGAGGGAATATC 58.741 37.037 0.00 0.00 0.00 1.63
287 288 7.016153 ACACAAGTTTACAGAGGGAATATCA 57.984 36.000 0.00 0.00 0.00 2.15
288 289 6.879458 ACACAAGTTTACAGAGGGAATATCAC 59.121 38.462 0.00 0.00 0.00 3.06
289 290 6.878923 CACAAGTTTACAGAGGGAATATCACA 59.121 38.462 0.00 0.00 0.00 3.58
290 291 7.065085 CACAAGTTTACAGAGGGAATATCACAG 59.935 40.741 0.00 0.00 0.00 3.66
291 292 6.875972 AGTTTACAGAGGGAATATCACAGT 57.124 37.500 0.00 0.00 0.00 3.55
292 293 6.644347 AGTTTACAGAGGGAATATCACAGTG 58.356 40.000 0.00 0.00 0.00 3.66
293 294 5.614324 TTACAGAGGGAATATCACAGTGG 57.386 43.478 0.00 0.00 0.00 4.00
294 295 2.774234 ACAGAGGGAATATCACAGTGGG 59.226 50.000 0.00 0.00 0.00 4.61
295 296 3.041211 CAGAGGGAATATCACAGTGGGA 58.959 50.000 0.00 0.00 0.00 4.37
296 297 3.455910 CAGAGGGAATATCACAGTGGGAA 59.544 47.826 0.00 0.00 0.00 3.97
297 298 3.713764 AGAGGGAATATCACAGTGGGAAG 59.286 47.826 0.00 0.00 0.00 3.46
298 299 3.456277 GAGGGAATATCACAGTGGGAAGT 59.544 47.826 0.00 0.00 0.00 3.01
299 300 3.200825 AGGGAATATCACAGTGGGAAGTG 59.799 47.826 0.00 0.00 37.10 3.16
300 301 3.545703 GGAATATCACAGTGGGAAGTGG 58.454 50.000 0.00 0.00 36.43 4.00
301 302 3.545703 GAATATCACAGTGGGAAGTGGG 58.454 50.000 0.00 0.00 36.43 4.61
302 303 2.335681 TATCACAGTGGGAAGTGGGA 57.664 50.000 0.00 0.00 36.43 4.37
303 304 1.444933 ATCACAGTGGGAAGTGGGAA 58.555 50.000 0.00 0.00 36.43 3.97
304 305 0.764890 TCACAGTGGGAAGTGGGAAG 59.235 55.000 0.00 0.00 36.43 3.46
305 306 0.250901 CACAGTGGGAAGTGGGAAGG 60.251 60.000 0.00 0.00 32.24 3.46
306 307 0.401395 ACAGTGGGAAGTGGGAAGGA 60.401 55.000 0.00 0.00 0.00 3.36
307 308 0.771127 CAGTGGGAAGTGGGAAGGAA 59.229 55.000 0.00 0.00 0.00 3.36
308 309 1.355720 CAGTGGGAAGTGGGAAGGAAT 59.644 52.381 0.00 0.00 0.00 3.01
309 310 2.576191 CAGTGGGAAGTGGGAAGGAATA 59.424 50.000 0.00 0.00 0.00 1.75
310 311 3.010138 CAGTGGGAAGTGGGAAGGAATAA 59.990 47.826 0.00 0.00 0.00 1.40
311 312 3.660669 AGTGGGAAGTGGGAAGGAATAAA 59.339 43.478 0.00 0.00 0.00 1.40
312 313 4.017126 GTGGGAAGTGGGAAGGAATAAAG 58.983 47.826 0.00 0.00 0.00 1.85
313 314 3.024547 GGGAAGTGGGAAGGAATAAAGC 58.975 50.000 0.00 0.00 0.00 3.51
314 315 2.683362 GGAAGTGGGAAGGAATAAAGCG 59.317 50.000 0.00 0.00 0.00 4.68
315 316 2.420058 AGTGGGAAGGAATAAAGCGG 57.580 50.000 0.00 0.00 0.00 5.52
316 317 0.738975 GTGGGAAGGAATAAAGCGGC 59.261 55.000 0.00 0.00 0.00 6.53
317 318 0.395173 TGGGAAGGAATAAAGCGGCC 60.395 55.000 0.00 0.00 0.00 6.13
318 319 0.395173 GGGAAGGAATAAAGCGGCCA 60.395 55.000 2.24 0.00 0.00 5.36
319 320 1.470051 GGAAGGAATAAAGCGGCCAA 58.530 50.000 2.24 0.00 0.00 4.52
320 321 1.822371 GGAAGGAATAAAGCGGCCAAA 59.178 47.619 2.24 0.00 0.00 3.28
321 322 2.232696 GGAAGGAATAAAGCGGCCAAAA 59.767 45.455 2.24 0.00 0.00 2.44
322 323 3.118775 GGAAGGAATAAAGCGGCCAAAAT 60.119 43.478 2.24 0.00 0.00 1.82
323 324 3.525268 AGGAATAAAGCGGCCAAAATG 57.475 42.857 2.24 0.00 0.00 2.32
324 325 3.096092 AGGAATAAAGCGGCCAAAATGA 58.904 40.909 2.24 0.00 0.00 2.57
325 326 3.706086 AGGAATAAAGCGGCCAAAATGAT 59.294 39.130 2.24 0.00 0.00 2.45
326 327 4.892934 AGGAATAAAGCGGCCAAAATGATA 59.107 37.500 2.24 0.00 0.00 2.15
327 328 5.539955 AGGAATAAAGCGGCCAAAATGATAT 59.460 36.000 2.24 0.00 0.00 1.63
328 329 5.634859 GGAATAAAGCGGCCAAAATGATATG 59.365 40.000 2.24 0.00 0.00 1.78
329 330 2.514205 AAGCGGCCAAAATGATATGC 57.486 45.000 2.24 0.00 0.00 3.14
330 331 0.675633 AGCGGCCAAAATGATATGCC 59.324 50.000 2.24 0.00 38.74 4.40
332 333 3.892200 GGCCAAAATGATATGCCGG 57.108 52.632 0.00 0.00 31.55 6.13
333 334 0.319813 GGCCAAAATGATATGCCGGC 60.320 55.000 22.73 22.73 37.33 6.13
334 335 0.675633 GCCAAAATGATATGCCGGCT 59.324 50.000 29.70 15.76 35.17 5.52
335 336 1.336240 GCCAAAATGATATGCCGGCTC 60.336 52.381 29.70 17.89 35.17 4.70
336 337 1.955778 CCAAAATGATATGCCGGCTCA 59.044 47.619 29.70 23.34 0.00 4.26
337 338 2.030540 CCAAAATGATATGCCGGCTCAG 60.031 50.000 29.70 10.72 0.00 3.35
338 339 2.620115 CAAAATGATATGCCGGCTCAGT 59.380 45.455 29.70 19.53 0.00 3.41
339 340 2.175878 AATGATATGCCGGCTCAGTC 57.824 50.000 29.70 19.55 0.00 3.51
340 341 1.346062 ATGATATGCCGGCTCAGTCT 58.654 50.000 29.70 5.43 0.00 3.24
341 342 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
342 343 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
343 344 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
344 345 0.179111 TATGCCGGCTCAGTCTTTCG 60.179 55.000 29.70 0.00 0.00 3.46
345 346 2.815647 GCCGGCTCAGTCTTTCGG 60.816 66.667 22.15 0.00 43.13 4.30
346 347 2.970639 CCGGCTCAGTCTTTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
347 348 1.153745 CCGGCTCAGTCTTTCGGAG 60.154 63.158 0.00 0.00 42.94 4.63
348 349 1.153745 CGGCTCAGTCTTTCGGAGG 60.154 63.158 0.00 0.00 38.48 4.30
349 350 1.878656 CGGCTCAGTCTTTCGGAGGT 61.879 60.000 0.00 0.00 38.48 3.85
350 351 0.390472 GGCTCAGTCTTTCGGAGGTG 60.390 60.000 0.00 0.00 38.48 4.00
351 352 1.016653 GCTCAGTCTTTCGGAGGTGC 61.017 60.000 0.00 0.00 38.48 5.01
352 353 0.605589 CTCAGTCTTTCGGAGGTGCT 59.394 55.000 0.00 0.00 35.32 4.40
353 354 0.603569 TCAGTCTTTCGGAGGTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
354 355 0.318441 CAGTCTTTCGGAGGTGCTCA 59.682 55.000 0.00 0.00 31.08 4.26
355 356 1.066573 CAGTCTTTCGGAGGTGCTCAT 60.067 52.381 0.00 0.00 31.08 2.90
356 357 2.166459 CAGTCTTTCGGAGGTGCTCATA 59.834 50.000 0.00 0.00 31.08 2.15
357 358 2.428890 AGTCTTTCGGAGGTGCTCATAG 59.571 50.000 0.00 0.00 31.08 2.23
358 359 1.757118 TCTTTCGGAGGTGCTCATAGG 59.243 52.381 0.00 0.00 31.08 2.57
359 360 1.757118 CTTTCGGAGGTGCTCATAGGA 59.243 52.381 0.00 0.00 31.08 2.94
360 361 2.088104 TTCGGAGGTGCTCATAGGAT 57.912 50.000 0.00 0.00 31.08 3.24
361 362 2.971901 TCGGAGGTGCTCATAGGATA 57.028 50.000 0.00 0.00 31.08 2.59
362 363 3.238788 TCGGAGGTGCTCATAGGATAA 57.761 47.619 0.00 0.00 31.08 1.75
363 364 3.572642 TCGGAGGTGCTCATAGGATAAA 58.427 45.455 0.00 0.00 31.08 1.40
364 365 3.574396 TCGGAGGTGCTCATAGGATAAAG 59.426 47.826 0.00 0.00 31.08 1.85
365 366 3.322254 CGGAGGTGCTCATAGGATAAAGT 59.678 47.826 0.00 0.00 31.08 2.66
366 367 4.636249 GGAGGTGCTCATAGGATAAAGTG 58.364 47.826 0.00 0.00 31.08 3.16
367 368 4.101741 GGAGGTGCTCATAGGATAAAGTGT 59.898 45.833 0.00 0.00 31.08 3.55
368 369 5.028549 AGGTGCTCATAGGATAAAGTGTG 57.971 43.478 0.00 0.00 0.00 3.82
369 370 4.471386 AGGTGCTCATAGGATAAAGTGTGT 59.529 41.667 0.00 0.00 0.00 3.72
370 371 4.572389 GGTGCTCATAGGATAAAGTGTGTG 59.428 45.833 0.00 0.00 0.00 3.82
371 372 5.178797 GTGCTCATAGGATAAAGTGTGTGT 58.821 41.667 0.00 0.00 0.00 3.72
372 373 5.063944 GTGCTCATAGGATAAAGTGTGTGTG 59.936 44.000 0.00 0.00 0.00 3.82
373 374 5.178797 GCTCATAGGATAAAGTGTGTGTGT 58.821 41.667 0.00 0.00 0.00 3.72
374 375 5.063944 GCTCATAGGATAAAGTGTGTGTGTG 59.936 44.000 0.00 0.00 0.00 3.82
375 376 6.109156 TCATAGGATAAAGTGTGTGTGTGT 57.891 37.500 0.00 0.00 0.00 3.72
376 377 5.931724 TCATAGGATAAAGTGTGTGTGTGTG 59.068 40.000 0.00 0.00 0.00 3.82
377 378 2.878406 AGGATAAAGTGTGTGTGTGTGC 59.122 45.455 0.00 0.00 0.00 4.57
378 379 2.349438 GGATAAAGTGTGTGTGTGTGCG 60.349 50.000 0.00 0.00 0.00 5.34
379 380 1.728068 TAAAGTGTGTGTGTGTGCGT 58.272 45.000 0.00 0.00 0.00 5.24
380 381 0.878416 AAAGTGTGTGTGTGTGCGTT 59.122 45.000 0.00 0.00 0.00 4.84
381 382 0.446222 AAGTGTGTGTGTGTGCGTTC 59.554 50.000 0.00 0.00 0.00 3.95
382 383 0.672091 AGTGTGTGTGTGTGCGTTCA 60.672 50.000 0.00 0.00 0.00 3.18
383 384 0.376852 GTGTGTGTGTGTGCGTTCAT 59.623 50.000 0.00 0.00 0.00 2.57
384 385 1.595328 GTGTGTGTGTGTGCGTTCATA 59.405 47.619 0.00 0.00 0.00 2.15
385 386 1.864082 TGTGTGTGTGTGCGTTCATAG 59.136 47.619 0.00 0.00 0.00 2.23
386 387 1.194547 GTGTGTGTGTGCGTTCATAGG 59.805 52.381 0.00 0.00 0.00 2.57
387 388 0.796312 GTGTGTGTGCGTTCATAGGG 59.204 55.000 0.00 0.00 0.00 3.53
388 389 0.321210 TGTGTGTGCGTTCATAGGGG 60.321 55.000 0.00 0.00 0.00 4.79
389 390 0.321298 GTGTGTGCGTTCATAGGGGT 60.321 55.000 0.00 0.00 0.00 4.95
390 391 0.321210 TGTGTGCGTTCATAGGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
391 392 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02
392 393 0.249120 TGTGCGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 0.00 3.51
393 394 0.249398 GTGCGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 0.00 3.41
394 395 0.249120 TGCGTTCATAGGGGTGAGTG 59.751 55.000 0.00 0.00 0.00 3.51
395 396 0.249398 GCGTTCATAGGGGTGAGTGT 59.751 55.000 0.00 0.00 0.00 3.55
396 397 1.479323 GCGTTCATAGGGGTGAGTGTA 59.521 52.381 0.00 0.00 0.00 2.90
397 398 2.102588 GCGTTCATAGGGGTGAGTGTAT 59.897 50.000 0.00 0.00 0.00 2.29
398 399 3.717707 CGTTCATAGGGGTGAGTGTATG 58.282 50.000 0.00 0.00 0.00 2.39
399 400 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
400 401 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
401 402 0.393077 ATAGGGGTGAGTGTATGCGC 59.607 55.000 0.00 0.00 0.00 6.09
402 403 2.011741 TAGGGGTGAGTGTATGCGCG 62.012 60.000 0.00 0.00 0.00 6.86
403 404 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
404 405 2.452813 GGGTGAGTGTATGCGCGTG 61.453 63.158 13.61 0.00 0.00 5.34
405 406 1.736645 GGTGAGTGTATGCGCGTGT 60.737 57.895 13.61 0.00 0.00 4.49
406 407 0.457166 GGTGAGTGTATGCGCGTGTA 60.457 55.000 13.61 0.00 0.00 2.90
407 408 1.556564 GTGAGTGTATGCGCGTGTAT 58.443 50.000 13.61 4.63 0.00 2.29
408 409 2.542205 GGTGAGTGTATGCGCGTGTATA 60.542 50.000 13.61 2.40 0.00 1.47
409 410 3.305964 GTGAGTGTATGCGCGTGTATAT 58.694 45.455 13.61 0.00 0.00 0.86
410 411 3.119628 GTGAGTGTATGCGCGTGTATATG 59.880 47.826 13.61 0.00 0.00 1.78
411 412 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
412 413 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
413 414 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
416 417 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
417 418 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
418 419 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
419 420 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
420 421 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
421 422 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
422 423 2.216488 CGTGTATATGAGCGCTTGTGTC 59.784 50.000 13.26 0.00 0.00 3.67
423 424 3.448686 GTGTATATGAGCGCTTGTGTCT 58.551 45.455 13.26 0.00 0.00 3.41
424 425 3.243877 GTGTATATGAGCGCTTGTGTCTG 59.756 47.826 13.26 0.00 0.00 3.51
425 426 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
426 427 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
427 428 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
428 429 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
429 430 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
430 431 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
431 432 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
432 433 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
433 434 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
434 435 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
435 436 3.673323 CGCTTGTGTCTGTACTGATGCTA 60.673 47.826 5.69 0.00 0.00 3.49
436 437 4.245660 GCTTGTGTCTGTACTGATGCTAA 58.754 43.478 5.69 0.07 0.00 3.09
437 438 4.690748 GCTTGTGTCTGTACTGATGCTAAA 59.309 41.667 5.69 0.00 0.00 1.85
438 439 5.179368 GCTTGTGTCTGTACTGATGCTAAAA 59.821 40.000 5.69 0.00 0.00 1.52
439 440 6.293407 GCTTGTGTCTGTACTGATGCTAAAAA 60.293 38.462 5.69 0.00 0.00 1.94
487 488 2.105477 CAGAGGGAATATCACAGTGGGG 59.895 54.545 0.00 0.00 0.00 4.96
551 552 5.293569 ACGAAAATGAAGGGAGTTATAAGCG 59.706 40.000 0.00 0.00 0.00 4.68
561 562 4.351192 GGAGTTATAAGCGGCAAAATGTG 58.649 43.478 1.45 0.00 0.00 3.21
881 888 1.867233 CCAAACTCTATCGGCAATCGG 59.133 52.381 0.00 0.00 39.77 4.18
882 889 2.550978 CAAACTCTATCGGCAATCGGT 58.449 47.619 0.00 0.00 39.77 4.69
958 965 4.707934 ACCCATAAACTTATCCAAAACCGG 59.292 41.667 0.00 0.00 0.00 5.28
1303 1310 2.223294 CGGGTGAGTGATCGTTCTCTAC 60.223 54.545 11.63 8.79 0.00 2.59
1314 1321 0.456312 GTTCTCTACCGCCACGTCTG 60.456 60.000 0.00 0.00 0.00 3.51
1315 1322 2.202623 CTCTACCGCCACGTCTGC 60.203 66.667 0.00 0.00 0.00 4.26
1709 1728 4.174305 CCACCCTTTGGCTTTCGT 57.826 55.556 0.00 0.00 39.07 3.85
2388 2442 4.742417 TGTTGTTCTTTGTGTGGTCAATG 58.258 39.130 0.00 0.00 0.00 2.82
2465 2521 4.377841 GCGTTCATTAGAATAGCATGCCTC 60.378 45.833 15.66 9.02 38.92 4.70
2466 2522 4.993584 CGTTCATTAGAATAGCATGCCTCT 59.006 41.667 15.66 16.01 35.92 3.69
2729 2785 4.674623 GCCTCTTTCATGTGCAGATTTCAG 60.675 45.833 0.00 0.00 0.00 3.02
3049 3107 4.579869 TCTCTAGTGGCACAATTCCTTTC 58.420 43.478 21.41 0.00 44.16 2.62
3192 3251 1.002430 GCATCCCTCACTGAACTGTCA 59.998 52.381 0.00 0.00 0.00 3.58
3295 3354 3.865164 GGTTTGTGCCTGTTTTCTTCTTG 59.135 43.478 0.00 0.00 0.00 3.02
3483 3545 9.116067 TGTAAGTGTGATAAATATAGCCCAAAC 57.884 33.333 0.00 0.00 0.00 2.93
3523 3597 8.132362 TGTGTTATGCTTCACGTTTCTTATTTT 58.868 29.630 0.00 0.00 37.38 1.82
3674 3748 8.367911 TCTATAATCAGGTAACCAGTTGCATAG 58.632 37.037 1.09 0.00 37.17 2.23
3832 3906 2.079158 AGTTGATCGTGATGTTGCCAG 58.921 47.619 0.00 0.00 0.00 4.85
3847 3921 1.561076 TGCCAGACTAGCACATTCCAT 59.439 47.619 0.00 0.00 34.69 3.41
4233 4310 3.214696 AGCTTCCCCTCAATTATTCCG 57.785 47.619 0.00 0.00 0.00 4.30
4297 4374 6.946340 TGAGCTGTTTCTAACTGGAATATGA 58.054 36.000 0.00 0.00 0.00 2.15
4397 4474 1.702957 CTGTTCTTGGTTACCCCAGGA 59.297 52.381 0.00 0.00 46.85 3.86
4401 4478 1.708551 TCTTGGTTACCCCAGGAAAGG 59.291 52.381 0.00 0.00 45.65 3.11
4450 4527 4.145365 TGGTTACCCCAAGAACATATCG 57.855 45.455 0.00 0.00 41.50 2.92
4479 4556 5.576563 TTTCTAATCAACCAAGACCCTCA 57.423 39.130 0.00 0.00 0.00 3.86
4781 4860 6.649557 ACGGATCTCTTCTTCGTTATTTGTTT 59.350 34.615 0.00 0.00 0.00 2.83
4824 4903 1.507140 AGTGTTCCCTTGTGAGGTCA 58.493 50.000 0.00 0.00 41.85 4.02
4937 5016 1.757682 TGGTTTTGTGTGTGAGGACC 58.242 50.000 0.00 0.00 0.00 4.46
4976 5055 4.639334 ACCCTTCCTTTCGTTAGTTCTTC 58.361 43.478 0.00 0.00 0.00 2.87
5107 5271 4.024893 CCTCCATACACACGTTTGATATGC 60.025 45.833 9.03 0.00 30.31 3.14
5124 5289 7.255491 TGATATGCAAGTTTAGCAGAGAATG 57.745 36.000 0.00 0.00 46.36 2.67
5194 5367 1.292061 CTCTCCAGACTCGTCCGTAG 58.708 60.000 0.00 0.00 0.00 3.51
5198 5371 1.065636 TCCAGACTCGTCCGTAGACAT 60.066 52.381 0.00 0.00 43.73 3.06
5200 5373 2.007608 CAGACTCGTCCGTAGACATGA 58.992 52.381 0.00 0.00 43.73 3.07
5213 5386 4.497507 CGTAGACATGAATACAGAAGCCGA 60.498 45.833 0.00 0.00 0.00 5.54
5222 5395 0.620556 ACAGAAGCCGACCATCCAAT 59.379 50.000 0.00 0.00 0.00 3.16
5223 5396 1.019673 CAGAAGCCGACCATCCAATG 58.980 55.000 0.00 0.00 0.00 2.82
5236 5409 5.780731 ACCATCCAATGATGTCCCTTAAAT 58.219 37.500 2.24 0.00 45.78 1.40
5237 5410 5.599656 ACCATCCAATGATGTCCCTTAAATG 59.400 40.000 2.24 0.00 45.78 2.32
5238 5411 5.510179 CCATCCAATGATGTCCCTTAAATGC 60.510 44.000 2.24 0.00 45.78 3.56
5239 5412 3.960102 TCCAATGATGTCCCTTAAATGCC 59.040 43.478 0.00 0.00 0.00 4.40
5240 5413 3.962718 CCAATGATGTCCCTTAAATGCCT 59.037 43.478 0.00 0.00 0.00 4.75
5241 5414 4.202182 CCAATGATGTCCCTTAAATGCCTG 60.202 45.833 0.00 0.00 0.00 4.85
5244 5418 3.266772 TGATGTCCCTTAAATGCCTGTCT 59.733 43.478 0.00 0.00 0.00 3.41
5277 5451 2.009774 CCCAAGTCCGCAATACTCAAG 58.990 52.381 0.00 0.00 0.00 3.02
5454 5758 2.064014 CGCATATGTCGTCTCATGCAT 58.936 47.619 4.29 0.00 43.10 3.96
5463 5767 0.966875 GTCTCATGCATTGTGCCCCA 60.967 55.000 0.00 0.00 44.23 4.96
5465 5769 1.214923 TCTCATGCATTGTGCCCCATA 59.785 47.619 0.00 0.00 44.23 2.74
5468 5772 1.758280 CATGCATTGTGCCCCATAAGT 59.242 47.619 0.00 0.00 44.23 2.24
5475 5779 3.448093 TGTGCCCCATAAGTTTCATCA 57.552 42.857 0.00 0.00 0.00 3.07
5520 5824 2.567615 CAGCCCTTAGTTCTGTGGTAGT 59.432 50.000 0.00 0.00 0.00 2.73
5529 5833 2.738846 GTTCTGTGGTAGTGCATGACAG 59.261 50.000 0.00 0.00 36.23 3.51
5532 5836 1.741401 TGGTAGTGCATGACAGCGC 60.741 57.895 0.00 0.00 45.04 5.92
5537 6623 4.678499 TGCATGACAGCGCGTCCA 62.678 61.111 23.01 13.72 44.71 4.02
5552 6638 1.202651 CGTCCAAGCTATACAAGGGGG 60.203 57.143 0.00 0.00 0.00 5.40
5570 6656 3.214328 GGGGTGATTATCGAGTTGCAAT 58.786 45.455 0.59 0.00 0.00 3.56
5583 6669 6.486248 TCGAGTTGCAATATTTAGTGAATGC 58.514 36.000 0.59 0.00 0.00 3.56
5649 6735 1.303643 GGTTGAAGAGCCTGGTGGG 60.304 63.158 0.00 0.00 38.36 4.61
5677 6763 7.233757 ACTTTCTCTCCACTTGTGTAATCTACT 59.766 37.037 0.00 0.00 0.00 2.57
5680 6766 3.845178 TCCACTTGTGTAATCTACTGCG 58.155 45.455 0.00 0.00 0.00 5.18
5686 6772 4.465632 TGTGTAATCTACTGCGACCATT 57.534 40.909 0.00 0.00 0.00 3.16
5728 6845 1.361668 GCGTTCATGGATCACGTGCT 61.362 55.000 11.67 0.00 36.29 4.40
5737 6854 2.488937 TGGATCACGTGCTAAGTCGTAA 59.511 45.455 11.67 0.00 38.52 3.18
5794 6912 4.260743 GCATGTTTTTCCAAAAGGTTGAGC 60.261 41.667 0.00 0.00 36.83 4.26
5827 6945 0.320421 GCCTACAAAGTCCGCAGACA 60.320 55.000 2.32 0.00 46.15 3.41
5828 6946 1.676014 GCCTACAAAGTCCGCAGACAT 60.676 52.381 2.32 0.00 46.15 3.06
5833 6951 1.197721 CAAAGTCCGCAGACATCCAAC 59.802 52.381 2.32 0.00 46.15 3.77
5840 6958 0.174162 GCAGACATCCAACAATGCCC 59.826 55.000 0.00 0.00 0.00 5.36
5841 6959 0.452987 CAGACATCCAACAATGCCCG 59.547 55.000 0.00 0.00 0.00 6.13
5844 6962 1.682005 CATCCAACAATGCCCGGGT 60.682 57.895 24.63 0.00 0.00 5.28
5872 6990 3.645212 CCAAAGAGATAGAGGAGGATGCA 59.355 47.826 0.00 0.00 0.00 3.96
5884 7002 0.255033 AGGATGCAGATGCTGAGCAA 59.745 50.000 12.69 0.00 43.62 3.91
5892 7010 1.845143 AGATGCTGAGCAAGGGAGAAT 59.155 47.619 12.69 0.00 43.62 2.40
5900 7018 0.462759 GCAAGGGAGAATCAGGGACG 60.463 60.000 0.00 0.00 36.25 4.79
5902 7020 0.042731 AAGGGAGAATCAGGGACGGA 59.957 55.000 0.00 0.00 36.25 4.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.697292 AGTAAGATGTATTAGGTCTCTGGAAAC 58.303 37.037 0.00 0.00 0.00 2.78
1 2 8.840200 AGTAAGATGTATTAGGTCTCTGGAAA 57.160 34.615 0.00 0.00 0.00 3.13
2 3 7.506261 GGAGTAAGATGTATTAGGTCTCTGGAA 59.494 40.741 0.00 0.00 0.00 3.53
3 4 7.005296 GGAGTAAGATGTATTAGGTCTCTGGA 58.995 42.308 0.00 0.00 0.00 3.86
4 5 6.209788 GGGAGTAAGATGTATTAGGTCTCTGG 59.790 46.154 0.00 0.00 0.00 3.86
5 6 7.007723 AGGGAGTAAGATGTATTAGGTCTCTG 58.992 42.308 0.00 0.00 0.00 3.35
6 7 7.169287 AGGGAGTAAGATGTATTAGGTCTCT 57.831 40.000 0.00 0.00 0.00 3.10
7 8 6.434965 GGAGGGAGTAAGATGTATTAGGTCTC 59.565 46.154 0.00 0.00 0.00 3.36
9 10 6.316513 AGGAGGGAGTAAGATGTATTAGGTC 58.683 44.000 0.00 0.00 0.00 3.85
12 13 6.782988 TGGAAGGAGGGAGTAAGATGTATTAG 59.217 42.308 0.00 0.00 0.00 1.73
13 14 6.689561 TGGAAGGAGGGAGTAAGATGTATTA 58.310 40.000 0.00 0.00 0.00 0.98
14 15 5.538877 TGGAAGGAGGGAGTAAGATGTATT 58.461 41.667 0.00 0.00 0.00 1.89
15 16 5.157770 TGGAAGGAGGGAGTAAGATGTAT 57.842 43.478 0.00 0.00 0.00 2.29
16 17 4.620086 TGGAAGGAGGGAGTAAGATGTA 57.380 45.455 0.00 0.00 0.00 2.29
17 18 3.491766 TGGAAGGAGGGAGTAAGATGT 57.508 47.619 0.00 0.00 0.00 3.06
18 19 4.230455 AGATGGAAGGAGGGAGTAAGATG 58.770 47.826 0.00 0.00 0.00 2.90
19 20 4.567987 AGATGGAAGGAGGGAGTAAGAT 57.432 45.455 0.00 0.00 0.00 2.40
20 21 5.688220 ATAGATGGAAGGAGGGAGTAAGA 57.312 43.478 0.00 0.00 0.00 2.10
21 22 7.782644 CCTATATAGATGGAAGGAGGGAGTAAG 59.217 44.444 11.53 0.00 0.00 2.34
22 23 7.313276 CCCTATATAGATGGAAGGAGGGAGTAA 60.313 44.444 11.53 0.00 44.48 2.24
23 24 6.162420 CCCTATATAGATGGAAGGAGGGAGTA 59.838 46.154 11.53 0.00 44.48 2.59
24 25 5.042979 CCCTATATAGATGGAAGGAGGGAGT 60.043 48.000 11.53 0.00 44.48 3.85
25 26 5.463154 CCCTATATAGATGGAAGGAGGGAG 58.537 50.000 11.53 0.00 44.48 4.30
26 27 4.327010 GCCCTATATAGATGGAAGGAGGGA 60.327 50.000 11.53 0.00 44.48 4.20
27 28 3.970640 GCCCTATATAGATGGAAGGAGGG 59.029 52.174 11.53 3.52 44.52 4.30
28 29 3.970640 GGCCCTATATAGATGGAAGGAGG 59.029 52.174 11.53 1.87 0.00 4.30
29 30 4.889780 AGGCCCTATATAGATGGAAGGAG 58.110 47.826 11.53 0.00 0.00 3.69
30 31 4.994411 AGGCCCTATATAGATGGAAGGA 57.006 45.455 11.53 0.00 0.00 3.36
31 32 8.013667 AGTATTAGGCCCTATATAGATGGAAGG 58.986 40.741 11.53 3.94 0.00 3.46
32 33 9.440761 AAGTATTAGGCCCTATATAGATGGAAG 57.559 37.037 11.53 0.00 0.00 3.46
33 34 9.799223 AAAGTATTAGGCCCTATATAGATGGAA 57.201 33.333 11.53 0.00 0.00 3.53
34 35 9.799223 AAAAGTATTAGGCCCTATATAGATGGA 57.201 33.333 11.53 0.00 0.00 3.41
58 59 7.281324 TCAATAGTCAAAGACGGTCTTGAAAAA 59.719 33.333 23.05 10.33 36.71 1.94
59 60 6.764085 TCAATAGTCAAAGACGGTCTTGAAAA 59.236 34.615 23.05 13.38 36.71 2.29
60 61 6.202188 GTCAATAGTCAAAGACGGTCTTGAAA 59.798 38.462 23.05 13.66 36.71 2.69
61 62 5.694910 GTCAATAGTCAAAGACGGTCTTGAA 59.305 40.000 23.05 11.96 36.71 2.69
62 63 5.221362 TGTCAATAGTCAAAGACGGTCTTGA 60.221 40.000 23.05 18.16 36.71 3.02
63 64 4.988540 TGTCAATAGTCAAAGACGGTCTTG 59.011 41.667 23.05 16.41 36.71 3.02
64 65 5.209818 TGTCAATAGTCAAAGACGGTCTT 57.790 39.130 17.38 17.38 38.59 3.01
65 66 4.866508 TGTCAATAGTCAAAGACGGTCT 57.133 40.909 4.45 4.45 37.67 3.85
66 67 5.227908 TCTTGTCAATAGTCAAAGACGGTC 58.772 41.667 0.00 0.00 37.67 4.79
67 68 5.209818 TCTTGTCAATAGTCAAAGACGGT 57.790 39.130 0.00 0.00 37.67 4.83
68 69 6.727824 AATCTTGTCAATAGTCAAAGACGG 57.272 37.500 0.00 0.00 37.67 4.79
82 83 9.045223 GCATGTCATGTACTATTAATCTTGTCA 57.955 33.333 14.26 0.00 0.00 3.58
83 84 9.045223 TGCATGTCATGTACTATTAATCTTGTC 57.955 33.333 14.26 0.00 0.00 3.18
84 85 8.962884 TGCATGTCATGTACTATTAATCTTGT 57.037 30.769 14.26 0.00 0.00 3.16
91 92 9.995003 TCACATTATGCATGTCATGTACTATTA 57.005 29.630 10.16 0.00 43.17 0.98
92 93 8.907222 TCACATTATGCATGTCATGTACTATT 57.093 30.769 10.16 0.00 43.17 1.73
93 94 8.907222 TTCACATTATGCATGTCATGTACTAT 57.093 30.769 10.16 4.57 43.17 2.12
94 95 8.729805 TTTCACATTATGCATGTCATGTACTA 57.270 30.769 10.16 2.43 43.17 1.82
95 96 7.628769 TTTCACATTATGCATGTCATGTACT 57.371 32.000 10.16 3.51 43.17 2.73
96 97 8.861033 ATTTTCACATTATGCATGTCATGTAC 57.139 30.769 10.16 0.00 43.17 2.90
125 126 8.783093 TCGTATGTGAAAGAAACTTTCAATGAT 58.217 29.630 22.56 17.48 39.76 2.45
126 127 8.148807 TCGTATGTGAAAGAAACTTTCAATGA 57.851 30.769 22.56 16.61 39.76 2.57
127 128 8.781067 TTCGTATGTGAAAGAAACTTTCAATG 57.219 30.769 22.56 15.11 39.76 2.82
128 129 9.965824 AATTCGTATGTGAAAGAAACTTTCAAT 57.034 25.926 22.56 19.24 39.76 2.57
129 130 9.796120 AAATTCGTATGTGAAAGAAACTTTCAA 57.204 25.926 22.56 15.34 39.76 2.69
130 131 9.232082 CAAATTCGTATGTGAAAGAAACTTTCA 57.768 29.630 18.76 18.76 36.21 2.69
131 132 9.445786 TCAAATTCGTATGTGAAAGAAACTTTC 57.554 29.630 14.75 14.75 0.00 2.62
132 133 9.233232 GTCAAATTCGTATGTGAAAGAAACTTT 57.767 29.630 0.00 0.00 29.80 2.66
133 134 7.586300 CGTCAAATTCGTATGTGAAAGAAACTT 59.414 33.333 0.00 0.00 29.80 2.66
134 135 7.042321 TCGTCAAATTCGTATGTGAAAGAAACT 60.042 33.333 0.00 0.00 29.80 2.66
135 136 7.067116 TCGTCAAATTCGTATGTGAAAGAAAC 58.933 34.615 0.00 0.00 29.80 2.78
136 137 7.179927 TCGTCAAATTCGTATGTGAAAGAAA 57.820 32.000 0.00 0.00 29.80 2.52
137 138 6.772770 TCGTCAAATTCGTATGTGAAAGAA 57.227 33.333 0.00 0.00 29.80 2.52
138 139 6.367695 ACATCGTCAAATTCGTATGTGAAAGA 59.632 34.615 0.00 1.07 29.80 2.52
139 140 6.534059 ACATCGTCAAATTCGTATGTGAAAG 58.466 36.000 0.00 0.00 29.80 2.62
140 141 6.474819 ACATCGTCAAATTCGTATGTGAAA 57.525 33.333 0.00 0.00 29.80 2.69
141 142 6.809689 AGTACATCGTCAAATTCGTATGTGAA 59.190 34.615 0.00 0.00 29.80 3.18
142 143 6.327154 AGTACATCGTCAAATTCGTATGTGA 58.673 36.000 0.00 0.00 34.18 3.58
143 144 6.569228 AGTACATCGTCAAATTCGTATGTG 57.431 37.500 0.00 0.00 34.18 3.21
144 145 7.117236 ACAAAGTACATCGTCAAATTCGTATGT 59.883 33.333 0.00 0.00 35.33 2.29
145 146 7.422462 CACAAAGTACATCGTCAAATTCGTATG 59.578 37.037 0.00 0.00 0.00 2.39
146 147 7.117236 ACACAAAGTACATCGTCAAATTCGTAT 59.883 33.333 0.00 0.00 0.00 3.06
147 148 6.421501 ACACAAAGTACATCGTCAAATTCGTA 59.578 34.615 0.00 0.00 0.00 3.43
148 149 5.235616 ACACAAAGTACATCGTCAAATTCGT 59.764 36.000 0.00 0.00 0.00 3.85
149 150 5.675970 ACACAAAGTACATCGTCAAATTCG 58.324 37.500 0.00 0.00 0.00 3.34
150 151 8.996988 TTTACACAAAGTACATCGTCAAATTC 57.003 30.769 0.00 0.00 30.91 2.17
151 152 9.959749 AATTTACACAAAGTACATCGTCAAATT 57.040 25.926 0.00 1.37 30.91 1.82
153 154 9.866936 GTAATTTACACAAAGTACATCGTCAAA 57.133 29.630 1.62 0.00 42.17 2.69
154 155 9.043079 TGTAATTTACACAAAGTACATCGTCAA 57.957 29.630 5.14 0.00 45.34 3.18
155 156 8.590719 TGTAATTTACACAAAGTACATCGTCA 57.409 30.769 5.14 0.00 45.34 4.35
194 195 9.418045 GGCTAACTTTTATCAAATGTTAAAGCA 57.582 29.630 17.64 0.00 39.44 3.91
195 196 9.639601 AGGCTAACTTTTATCAAATGTTAAAGC 57.360 29.630 12.32 12.32 39.20 3.51
235 236 9.265862 CTCCATCCTTTCATCTATATAAGGTCT 57.734 37.037 0.00 0.00 38.59 3.85
236 237 9.041354 ACTCCATCCTTTCATCTATATAAGGTC 57.959 37.037 0.00 0.00 38.59 3.85
237 238 8.980832 ACTCCATCCTTTCATCTATATAAGGT 57.019 34.615 0.00 0.00 38.59 3.50
241 242 9.822727 TGTGTACTCCATCCTTTCATCTATATA 57.177 33.333 0.00 0.00 0.00 0.86
242 243 8.727100 TGTGTACTCCATCCTTTCATCTATAT 57.273 34.615 0.00 0.00 0.00 0.86
243 244 8.547481 TTGTGTACTCCATCCTTTCATCTATA 57.453 34.615 0.00 0.00 0.00 1.31
244 245 7.126421 ACTTGTGTACTCCATCCTTTCATCTAT 59.874 37.037 0.00 0.00 0.00 1.98
245 246 6.440647 ACTTGTGTACTCCATCCTTTCATCTA 59.559 38.462 0.00 0.00 0.00 1.98
246 247 5.249393 ACTTGTGTACTCCATCCTTTCATCT 59.751 40.000 0.00 0.00 0.00 2.90
247 248 5.491982 ACTTGTGTACTCCATCCTTTCATC 58.508 41.667 0.00 0.00 0.00 2.92
248 249 5.505181 ACTTGTGTACTCCATCCTTTCAT 57.495 39.130 0.00 0.00 0.00 2.57
249 250 4.974645 ACTTGTGTACTCCATCCTTTCA 57.025 40.909 0.00 0.00 0.00 2.69
250 251 6.708949 TGTAAACTTGTGTACTCCATCCTTTC 59.291 38.462 0.00 0.00 0.00 2.62
251 252 6.597562 TGTAAACTTGTGTACTCCATCCTTT 58.402 36.000 0.00 0.00 0.00 3.11
252 253 6.042781 TCTGTAAACTTGTGTACTCCATCCTT 59.957 38.462 0.00 0.00 0.00 3.36
253 254 5.542635 TCTGTAAACTTGTGTACTCCATCCT 59.457 40.000 0.00 0.00 0.00 3.24
254 255 5.790593 TCTGTAAACTTGTGTACTCCATCC 58.209 41.667 0.00 0.00 0.00 3.51
255 256 5.869888 CCTCTGTAAACTTGTGTACTCCATC 59.130 44.000 0.00 0.00 0.00 3.51
256 257 5.280011 CCCTCTGTAAACTTGTGTACTCCAT 60.280 44.000 0.00 0.00 0.00 3.41
257 258 4.039973 CCCTCTGTAAACTTGTGTACTCCA 59.960 45.833 0.00 0.00 0.00 3.86
258 259 4.282703 TCCCTCTGTAAACTTGTGTACTCC 59.717 45.833 0.00 0.00 0.00 3.85
259 260 5.464030 TCCCTCTGTAAACTTGTGTACTC 57.536 43.478 0.00 0.00 0.00 2.59
260 261 5.881923 TTCCCTCTGTAAACTTGTGTACT 57.118 39.130 0.00 0.00 0.00 2.73
261 262 8.038944 TGATATTCCCTCTGTAAACTTGTGTAC 58.961 37.037 0.00 0.00 0.00 2.90
262 263 8.038944 GTGATATTCCCTCTGTAAACTTGTGTA 58.961 37.037 0.00 0.00 0.00 2.90
263 264 6.879458 GTGATATTCCCTCTGTAAACTTGTGT 59.121 38.462 0.00 0.00 0.00 3.72
264 265 6.878923 TGTGATATTCCCTCTGTAAACTTGTG 59.121 38.462 0.00 0.00 0.00 3.33
265 266 7.016153 TGTGATATTCCCTCTGTAAACTTGT 57.984 36.000 0.00 0.00 0.00 3.16
266 267 7.065085 CACTGTGATATTCCCTCTGTAAACTTG 59.935 40.741 0.32 0.00 0.00 3.16
267 268 7.106239 CACTGTGATATTCCCTCTGTAAACTT 58.894 38.462 0.32 0.00 0.00 2.66
268 269 6.352222 CCACTGTGATATTCCCTCTGTAAACT 60.352 42.308 9.86 0.00 0.00 2.66
269 270 5.817816 CCACTGTGATATTCCCTCTGTAAAC 59.182 44.000 9.86 0.00 0.00 2.01
270 271 5.104527 CCCACTGTGATATTCCCTCTGTAAA 60.105 44.000 9.86 0.00 0.00 2.01
271 272 4.408921 CCCACTGTGATATTCCCTCTGTAA 59.591 45.833 9.86 0.00 0.00 2.41
272 273 3.967326 CCCACTGTGATATTCCCTCTGTA 59.033 47.826 9.86 0.00 0.00 2.74
273 274 2.774234 CCCACTGTGATATTCCCTCTGT 59.226 50.000 9.86 0.00 0.00 3.41
274 275 3.041211 TCCCACTGTGATATTCCCTCTG 58.959 50.000 9.86 0.00 0.00 3.35
275 276 3.421394 TCCCACTGTGATATTCCCTCT 57.579 47.619 9.86 0.00 0.00 3.69
276 277 3.456277 ACTTCCCACTGTGATATTCCCTC 59.544 47.826 9.86 0.00 0.00 4.30
277 278 3.200825 CACTTCCCACTGTGATATTCCCT 59.799 47.826 9.86 0.00 36.38 4.20
278 279 3.545703 CACTTCCCACTGTGATATTCCC 58.454 50.000 9.86 0.00 36.38 3.97
279 280 3.545703 CCACTTCCCACTGTGATATTCC 58.454 50.000 9.86 0.00 36.38 3.01
280 281 3.199946 TCCCACTTCCCACTGTGATATTC 59.800 47.826 9.86 0.00 36.38 1.75
281 282 3.189606 TCCCACTTCCCACTGTGATATT 58.810 45.455 9.86 0.00 36.38 1.28
282 283 2.845659 TCCCACTTCCCACTGTGATAT 58.154 47.619 9.86 0.00 36.38 1.63
283 284 2.335681 TCCCACTTCCCACTGTGATA 57.664 50.000 9.86 0.00 36.38 2.15
284 285 1.352352 CTTCCCACTTCCCACTGTGAT 59.648 52.381 9.86 0.00 36.38 3.06
285 286 0.764890 CTTCCCACTTCCCACTGTGA 59.235 55.000 9.86 0.00 36.38 3.58
286 287 0.250901 CCTTCCCACTTCCCACTGTG 60.251 60.000 0.00 0.00 0.00 3.66
287 288 0.401395 TCCTTCCCACTTCCCACTGT 60.401 55.000 0.00 0.00 0.00 3.55
288 289 0.771127 TTCCTTCCCACTTCCCACTG 59.229 55.000 0.00 0.00 0.00 3.66
289 290 1.760405 ATTCCTTCCCACTTCCCACT 58.240 50.000 0.00 0.00 0.00 4.00
290 291 3.732048 TTATTCCTTCCCACTTCCCAC 57.268 47.619 0.00 0.00 0.00 4.61
291 292 3.563479 GCTTTATTCCTTCCCACTTCCCA 60.563 47.826 0.00 0.00 0.00 4.37
292 293 3.024547 GCTTTATTCCTTCCCACTTCCC 58.975 50.000 0.00 0.00 0.00 3.97
293 294 2.683362 CGCTTTATTCCTTCCCACTTCC 59.317 50.000 0.00 0.00 0.00 3.46
294 295 2.683362 CCGCTTTATTCCTTCCCACTTC 59.317 50.000 0.00 0.00 0.00 3.01
295 296 2.723273 CCGCTTTATTCCTTCCCACTT 58.277 47.619 0.00 0.00 0.00 3.16
296 297 1.682087 GCCGCTTTATTCCTTCCCACT 60.682 52.381 0.00 0.00 0.00 4.00
297 298 0.738975 GCCGCTTTATTCCTTCCCAC 59.261 55.000 0.00 0.00 0.00 4.61
298 299 0.395173 GGCCGCTTTATTCCTTCCCA 60.395 55.000 0.00 0.00 0.00 4.37
299 300 0.395173 TGGCCGCTTTATTCCTTCCC 60.395 55.000 0.00 0.00 0.00 3.97
300 301 1.470051 TTGGCCGCTTTATTCCTTCC 58.530 50.000 0.00 0.00 0.00 3.46
301 302 3.586100 TTTTGGCCGCTTTATTCCTTC 57.414 42.857 0.00 0.00 0.00 3.46
302 303 3.513515 TCATTTTGGCCGCTTTATTCCTT 59.486 39.130 0.00 0.00 0.00 3.36
303 304 3.096092 TCATTTTGGCCGCTTTATTCCT 58.904 40.909 0.00 0.00 0.00 3.36
304 305 3.518634 TCATTTTGGCCGCTTTATTCC 57.481 42.857 0.00 0.00 0.00 3.01
305 306 5.119125 GCATATCATTTTGGCCGCTTTATTC 59.881 40.000 0.00 0.00 0.00 1.75
306 307 4.990426 GCATATCATTTTGGCCGCTTTATT 59.010 37.500 0.00 0.00 0.00 1.40
307 308 4.559153 GCATATCATTTTGGCCGCTTTAT 58.441 39.130 0.00 0.00 0.00 1.40
308 309 3.243704 GGCATATCATTTTGGCCGCTTTA 60.244 43.478 0.00 0.00 34.56 1.85
309 310 2.483538 GGCATATCATTTTGGCCGCTTT 60.484 45.455 0.00 0.00 34.56 3.51
310 311 1.069049 GGCATATCATTTTGGCCGCTT 59.931 47.619 0.00 0.00 34.56 4.68
311 312 0.675633 GGCATATCATTTTGGCCGCT 59.324 50.000 0.00 0.00 34.56 5.52
312 313 3.199764 GGCATATCATTTTGGCCGC 57.800 52.632 0.00 0.00 34.56 6.53
314 315 0.319813 GCCGGCATATCATTTTGGCC 60.320 55.000 24.80 0.00 41.20 5.36
315 316 0.675633 AGCCGGCATATCATTTTGGC 59.324 50.000 31.54 0.00 41.27 4.52
316 317 1.955778 TGAGCCGGCATATCATTTTGG 59.044 47.619 31.54 0.00 0.00 3.28
317 318 2.620115 ACTGAGCCGGCATATCATTTTG 59.380 45.455 31.54 13.72 0.00 2.44
318 319 2.880890 GACTGAGCCGGCATATCATTTT 59.119 45.455 31.54 10.68 0.00 1.82
319 320 2.105477 AGACTGAGCCGGCATATCATTT 59.895 45.455 31.54 13.22 0.00 2.32
320 321 1.696336 AGACTGAGCCGGCATATCATT 59.304 47.619 31.54 17.84 0.00 2.57
321 322 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
322 323 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
323 324 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
324 325 1.539065 CGAAAGACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
325 326 0.179111 CGAAAGACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
326 327 1.448540 CGAAAGACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
327 328 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
328 329 2.815647 CCGAAAGACTGAGCCGGC 60.816 66.667 21.89 21.89 33.47 6.13
329 330 1.153745 CTCCGAAAGACTGAGCCGG 60.154 63.158 0.00 0.00 41.36 6.13
330 331 1.153745 CCTCCGAAAGACTGAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
331 332 0.390472 CACCTCCGAAAGACTGAGCC 60.390 60.000 0.00 0.00 0.00 4.70
332 333 1.016653 GCACCTCCGAAAGACTGAGC 61.017 60.000 0.00 0.00 0.00 4.26
333 334 0.605589 AGCACCTCCGAAAGACTGAG 59.394 55.000 0.00 0.00 0.00 3.35
334 335 0.603569 GAGCACCTCCGAAAGACTGA 59.396 55.000 0.00 0.00 0.00 3.41
335 336 0.318441 TGAGCACCTCCGAAAGACTG 59.682 55.000 0.00 0.00 0.00 3.51
336 337 1.270907 ATGAGCACCTCCGAAAGACT 58.729 50.000 0.00 0.00 0.00 3.24
337 338 2.482142 CCTATGAGCACCTCCGAAAGAC 60.482 54.545 0.00 0.00 0.00 3.01
338 339 1.757118 CCTATGAGCACCTCCGAAAGA 59.243 52.381 0.00 0.00 0.00 2.52
339 340 1.757118 TCCTATGAGCACCTCCGAAAG 59.243 52.381 0.00 0.00 0.00 2.62
340 341 1.860641 TCCTATGAGCACCTCCGAAA 58.139 50.000 0.00 0.00 0.00 3.46
341 342 2.088104 ATCCTATGAGCACCTCCGAA 57.912 50.000 0.00 0.00 0.00 4.30
342 343 2.971901 TATCCTATGAGCACCTCCGA 57.028 50.000 0.00 0.00 0.00 4.55
343 344 3.322254 ACTTTATCCTATGAGCACCTCCG 59.678 47.826 0.00 0.00 0.00 4.63
344 345 4.101741 ACACTTTATCCTATGAGCACCTCC 59.898 45.833 0.00 0.00 0.00 4.30
345 346 5.053145 CACACTTTATCCTATGAGCACCTC 58.947 45.833 0.00 0.00 0.00 3.85
346 347 4.471386 ACACACTTTATCCTATGAGCACCT 59.529 41.667 0.00 0.00 0.00 4.00
347 348 4.572389 CACACACTTTATCCTATGAGCACC 59.428 45.833 0.00 0.00 0.00 5.01
348 349 5.063944 CACACACACTTTATCCTATGAGCAC 59.936 44.000 0.00 0.00 0.00 4.40
349 350 5.178061 CACACACACTTTATCCTATGAGCA 58.822 41.667 0.00 0.00 0.00 4.26
350 351 5.063944 CACACACACACTTTATCCTATGAGC 59.936 44.000 0.00 0.00 0.00 4.26
351 352 6.091305 CACACACACACACTTTATCCTATGAG 59.909 42.308 0.00 0.00 0.00 2.90
352 353 5.931724 CACACACACACACTTTATCCTATGA 59.068 40.000 0.00 0.00 0.00 2.15
353 354 5.390885 GCACACACACACACTTTATCCTATG 60.391 44.000 0.00 0.00 0.00 2.23
354 355 4.695455 GCACACACACACACTTTATCCTAT 59.305 41.667 0.00 0.00 0.00 2.57
355 356 4.062293 GCACACACACACACTTTATCCTA 58.938 43.478 0.00 0.00 0.00 2.94
356 357 2.878406 GCACACACACACACTTTATCCT 59.122 45.455 0.00 0.00 0.00 3.24
357 358 2.349438 CGCACACACACACACTTTATCC 60.349 50.000 0.00 0.00 0.00 2.59
358 359 2.286833 ACGCACACACACACACTTTATC 59.713 45.455 0.00 0.00 0.00 1.75
359 360 2.285083 ACGCACACACACACACTTTAT 58.715 42.857 0.00 0.00 0.00 1.40
360 361 1.728068 ACGCACACACACACACTTTA 58.272 45.000 0.00 0.00 0.00 1.85
361 362 0.878416 AACGCACACACACACACTTT 59.122 45.000 0.00 0.00 0.00 2.66
362 363 0.446222 GAACGCACACACACACACTT 59.554 50.000 0.00 0.00 0.00 3.16
363 364 0.672091 TGAACGCACACACACACACT 60.672 50.000 0.00 0.00 0.00 3.55
364 365 0.376852 ATGAACGCACACACACACAC 59.623 50.000 0.00 0.00 0.00 3.82
365 366 1.864082 CTATGAACGCACACACACACA 59.136 47.619 0.00 0.00 0.00 3.72
366 367 1.194547 CCTATGAACGCACACACACAC 59.805 52.381 0.00 0.00 0.00 3.82
367 368 1.507562 CCTATGAACGCACACACACA 58.492 50.000 0.00 0.00 0.00 3.72
368 369 0.796312 CCCTATGAACGCACACACAC 59.204 55.000 0.00 0.00 0.00 3.82
369 370 0.321210 CCCCTATGAACGCACACACA 60.321 55.000 0.00 0.00 0.00 3.72
370 371 0.321298 ACCCCTATGAACGCACACAC 60.321 55.000 0.00 0.00 0.00 3.82
371 372 0.321210 CACCCCTATGAACGCACACA 60.321 55.000 0.00 0.00 0.00 3.72
372 373 0.036765 TCACCCCTATGAACGCACAC 60.037 55.000 0.00 0.00 0.00 3.82
373 374 0.249120 CTCACCCCTATGAACGCACA 59.751 55.000 0.00 0.00 0.00 4.57
374 375 0.249398 ACTCACCCCTATGAACGCAC 59.751 55.000 0.00 0.00 0.00 5.34
375 376 0.249120 CACTCACCCCTATGAACGCA 59.751 55.000 0.00 0.00 0.00 5.24
376 377 0.249398 ACACTCACCCCTATGAACGC 59.751 55.000 0.00 0.00 0.00 4.84
377 378 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
378 379 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
379 380 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
380 381 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
381 382 1.873903 GCGCATACACTCACCCCTATG 60.874 57.143 0.30 0.00 0.00 2.23
382 383 0.393077 GCGCATACACTCACCCCTAT 59.607 55.000 0.30 0.00 0.00 2.57
383 384 1.820581 GCGCATACACTCACCCCTA 59.179 57.895 0.30 0.00 0.00 3.53
384 385 2.584608 GCGCATACACTCACCCCT 59.415 61.111 0.30 0.00 0.00 4.79
385 386 2.890474 CGCGCATACACTCACCCC 60.890 66.667 8.75 0.00 0.00 4.95
386 387 2.125673 ACGCGCATACACTCACCC 60.126 61.111 5.73 0.00 0.00 4.61
387 388 0.457166 TACACGCGCATACACTCACC 60.457 55.000 5.73 0.00 0.00 4.02
388 389 1.556564 ATACACGCGCATACACTCAC 58.443 50.000 5.73 0.00 0.00 3.51
389 390 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
390 391 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
391 392 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
392 393 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
393 394 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
394 395 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
395 396 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
396 397 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
397 398 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
401 402 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
402 403 3.243877 CAGACACAAGCGCTCATATACAC 59.756 47.826 12.06 0.00 0.00 2.90
403 404 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
404 405 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
405 406 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
406 407 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
407 408 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
408 409 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
409 410 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
410 411 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
411 412 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
412 413 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
413 414 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
414 415 2.693069 AGCATCAGTACAGACACAAGC 58.307 47.619 0.00 0.00 0.00 4.01
415 416 6.785488 TTTTAGCATCAGTACAGACACAAG 57.215 37.500 0.00 0.00 0.00 3.16
453 454 7.829211 TGATATTCCCTCTGTAAACTTTTGGAG 59.171 37.037 0.00 0.00 0.00 3.86
454 455 7.610305 GTGATATTCCCTCTGTAAACTTTTGGA 59.390 37.037 0.00 0.00 0.00 3.53
455 456 7.393234 TGTGATATTCCCTCTGTAAACTTTTGG 59.607 37.037 0.00 0.00 0.00 3.28
456 457 8.335532 TGTGATATTCCCTCTGTAAACTTTTG 57.664 34.615 0.00 0.00 0.00 2.44
457 458 8.164070 ACTGTGATATTCCCTCTGTAAACTTTT 58.836 33.333 0.00 0.00 0.00 2.27
461 462 5.817816 CCACTGTGATATTCCCTCTGTAAAC 59.182 44.000 9.86 0.00 0.00 2.01
468 469 2.370189 CTCCCCACTGTGATATTCCCTC 59.630 54.545 9.86 0.00 0.00 4.30
487 488 3.447742 CATTTTGGCCGCTTTATTCCTC 58.552 45.455 0.00 0.00 0.00 3.71
881 888 3.942439 GGGGAGGATAGGCCGCAC 61.942 72.222 0.00 0.00 43.43 5.34
1708 1727 2.299993 TCACTGCAAGATCGATCCAC 57.700 50.000 21.66 11.81 37.43 4.02
1709 1728 3.548745 AATCACTGCAAGATCGATCCA 57.451 42.857 21.66 11.70 37.43 3.41
2054 2106 8.034215 TGTGTGAATTCTCAAAGAAAACACAAT 58.966 29.630 21.41 0.00 45.61 2.71
2388 2442 6.127980 GGGTGGATCAAGTTTAGTTTAAGCTC 60.128 42.308 0.00 0.00 0.00 4.09
2446 2502 9.828039 CAATATAGAGGCATGCTATTCTAATGA 57.172 33.333 18.92 11.73 31.43 2.57
2514 2570 6.319658 TCAAGATAAGAAACATGGCCTTGATC 59.680 38.462 24.48 19.55 35.34 2.92
2559 2615 4.133013 ACGGAAGATAGCGGTAATTTGT 57.867 40.909 0.00 0.00 0.00 2.83
2729 2785 3.493767 AGGGACAAGAGAACTCCAAAC 57.506 47.619 0.00 0.00 0.00 2.93
3010 3068 6.589523 CACTAGAGAAACTTGTCTGATCAAGG 59.410 42.308 17.87 0.00 46.11 3.61
3049 3107 8.918658 CAAGTGAAAAATGATAACAATGACAGG 58.081 33.333 0.00 0.00 0.00 4.00
3192 3251 4.934356 TGATGAAACCCTTCCAGCTAAAT 58.066 39.130 0.00 0.00 0.00 1.40
3295 3354 2.663826 AAGATGAGGAGTCAAGCGAC 57.336 50.000 0.00 0.00 42.95 5.19
3332 3393 6.421377 AAAACAAAGGAATTGAACAGCAAC 57.579 33.333 0.00 0.00 41.85 4.17
3335 3396 7.770801 AGTAAAAACAAAGGAATTGAACAGC 57.229 32.000 0.00 0.00 41.85 4.40
3496 3558 5.493133 AAGAAACGTGAAGCATAACACAA 57.507 34.783 0.00 0.00 36.91 3.33
3523 3597 2.655090 TCTGCAAGGTTGGTCATTCA 57.345 45.000 0.00 0.00 0.00 2.57
3674 3748 5.652452 ACACCTAATTATTCCAACAAGAGCC 59.348 40.000 0.00 0.00 0.00 4.70
3832 3906 6.038356 CCATCAAAAATGGAATGTGCTAGTC 58.962 40.000 0.00 0.00 41.64 2.59
4297 4374 6.528537 TCAATGTTGCCAAAGCTGTATAAT 57.471 33.333 0.00 0.00 40.80 1.28
4317 4394 8.934507 AACTTTCAATTTATTTGGTCGTTCAA 57.065 26.923 0.00 0.00 35.92 2.69
4354 4431 8.584157 ACAGAAAAATATGTTATGTTGCTTGGA 58.416 29.630 0.00 0.00 0.00 3.53
4450 4527 7.706607 GGGTCTTGGTTGATTAGAAAAATATGC 59.293 37.037 0.00 0.00 0.00 3.14
4479 4556 6.959639 TTGACTAGCTGATTTTGACCTTTT 57.040 33.333 0.00 0.00 0.00 2.27
4610 4689 6.569226 GCATTAACATGGCTCTTGGATCATAC 60.569 42.308 0.00 0.00 0.00 2.39
4681 4760 1.274447 TCACAGCAGTCACCTCATCAG 59.726 52.381 0.00 0.00 0.00 2.90
4824 4903 3.424703 ACCATCTGCAATGTAGCTGTTT 58.575 40.909 0.00 0.00 35.31 2.83
4919 4998 0.661020 CGGTCCTCACACACAAAACC 59.339 55.000 0.00 0.00 0.00 3.27
4937 5016 5.811100 GGAAGGGTACAAAGAAGATAACTCG 59.189 44.000 0.00 0.00 0.00 4.18
4976 5055 3.011818 TGAGTCCAACATTGCATAGCAG 58.988 45.455 0.00 0.00 40.61 4.24
5053 5151 0.892358 TGGTCTAACTGACGAGGCGT 60.892 55.000 0.00 0.00 46.24 5.68
5107 5271 5.695851 AACACCATTCTCTGCTAAACTTG 57.304 39.130 0.00 0.00 0.00 3.16
5124 5289 0.179081 GGTCGAGATGCCCTAACACC 60.179 60.000 0.00 0.00 0.00 4.16
5181 5353 2.398252 TCATGTCTACGGACGAGTCT 57.602 50.000 0.00 0.00 44.83 3.24
5194 5367 2.866762 GGTCGGCTTCTGTATTCATGTC 59.133 50.000 0.00 0.00 0.00 3.06
5198 5371 2.158957 GGATGGTCGGCTTCTGTATTCA 60.159 50.000 0.00 0.00 0.00 2.57
5200 5373 1.837439 TGGATGGTCGGCTTCTGTATT 59.163 47.619 0.00 0.00 0.00 1.89
5222 5395 3.266772 AGACAGGCATTTAAGGGACATCA 59.733 43.478 0.00 0.00 0.00 3.07
5223 5396 3.891049 AGACAGGCATTTAAGGGACATC 58.109 45.455 0.00 0.00 0.00 3.06
5256 5430 0.251916 TGAGTATTGCGGACTTGGGG 59.748 55.000 0.00 0.00 0.00 4.96
5364 5664 6.652481 ACTTGTTGAACATCCAGTTATCTCAG 59.348 38.462 0.00 0.00 41.51 3.35
5409 5710 7.148705 CGGTTGACTCAAGTATCGTTGAATTTA 60.149 37.037 0.00 0.00 36.01 1.40
5418 5719 1.990799 TGCGGTTGACTCAAGTATCG 58.009 50.000 0.00 0.00 0.00 2.92
5419 5720 5.050490 ACATATGCGGTTGACTCAAGTATC 58.950 41.667 1.58 0.00 0.00 2.24
5432 5733 1.869754 GCATGAGACGACATATGCGGT 60.870 52.381 18.99 10.72 36.89 5.68
5454 5758 3.772387 TGATGAAACTTATGGGGCACAA 58.228 40.909 0.00 0.00 0.00 3.33
5465 5769 9.985730 ACATTCATACATTGTTTGATGAAACTT 57.014 25.926 14.33 0.72 40.61 2.66
5475 5779 9.153721 CTGGCAATTTACATTCATACATTGTTT 57.846 29.630 0.00 0.00 28.94 2.83
5489 5793 3.449746 ACTAAGGGCTGGCAATTTACA 57.550 42.857 2.88 0.00 0.00 2.41
5529 5833 0.577269 CTTGTATAGCTTGGACGCGC 59.423 55.000 5.73 0.00 34.40 6.86
5532 5836 1.202651 CCCCCTTGTATAGCTTGGACG 60.203 57.143 0.00 0.00 0.00 4.79
5537 6623 5.280011 CGATAATCACCCCCTTGTATAGCTT 60.280 44.000 0.00 0.00 0.00 3.74
5552 6638 9.586150 CACTAAATATTGCAACTCGATAATCAC 57.414 33.333 0.00 0.00 0.00 3.06
5570 6656 7.482474 CATGTTGGTCATGCATTCACTAAATA 58.518 34.615 0.00 0.00 45.69 1.40
5627 6713 0.773644 ACCAGGCTCTTCAACCATGT 59.226 50.000 0.00 0.00 0.00 3.21
5649 6735 2.565841 ACACAAGTGGAGAGAAAGTGC 58.434 47.619 5.08 0.00 34.19 4.40
5686 6772 1.350684 TGTGAAGTTGCTAGGCCATCA 59.649 47.619 5.01 0.00 0.00 3.07
5710 6827 1.921243 TAGCACGTGATCCATGAACG 58.079 50.000 22.23 1.34 42.82 3.95
5737 6854 1.160137 GAGCAAAGTCATTCACGCCT 58.840 50.000 0.00 0.00 0.00 5.52
5827 6945 1.682005 CACCCGGGCATTGTTGGAT 60.682 57.895 24.08 0.00 0.00 3.41
5828 6946 2.282816 CACCCGGGCATTGTTGGA 60.283 61.111 24.08 0.00 0.00 3.53
5841 6959 2.265467 TATCTCTTTGGCCGCCACCC 62.265 60.000 13.00 0.00 30.78 4.61
5844 6962 0.465705 CTCTATCTCTTTGGCCGCCA 59.534 55.000 8.43 8.43 0.00 5.69
5852 6970 4.813809 TCTGCATCCTCCTCTATCTCTTT 58.186 43.478 0.00 0.00 0.00 2.52
5853 6971 4.467861 TCTGCATCCTCCTCTATCTCTT 57.532 45.455 0.00 0.00 0.00 2.85
5872 6990 1.283347 TTCTCCCTTGCTCAGCATCT 58.717 50.000 0.00 0.00 38.76 2.90
5884 7002 0.397816 CTCCGTCCCTGATTCTCCCT 60.398 60.000 0.00 0.00 0.00 4.20



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.