Multiple sequence alignment - TraesCS3A01G158800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G158800 chr3A 100.000 3218 0 0 1 3218 157030960 157034177 0.000000e+00 5943.0
1 TraesCS3A01G158800 chr3A 88.535 157 17 1 2707 2862 694963562 694963406 4.240000e-44 189.0
2 TraesCS3A01G158800 chr3D 93.119 2645 123 26 1 2617 138894633 138897246 0.000000e+00 3821.0
3 TraesCS3A01G158800 chr3D 92.966 327 23 0 127 453 134007404 134007730 8.080000e-131 477.0
4 TraesCS3A01G158800 chr3D 91.034 290 18 1 2929 3218 300829630 300829911 5.040000e-103 385.0
5 TraesCS3A01G158800 chr3D 91.275 149 13 0 2714 2862 488863577 488863429 1.510000e-48 204.0
6 TraesCS3A01G158800 chr3B 95.126 1949 71 12 613 2553 201887663 201889595 0.000000e+00 3051.0
7 TraesCS3A01G158800 chr3B 91.892 148 12 0 2714 2861 807942662 807942515 1.170000e-49 207.0
8 TraesCS3A01G158800 chr3B 100.000 32 0 0 574 605 201885705 201885736 3.470000e-05 60.2
9 TraesCS3A01G158800 chr4D 92.661 327 24 0 127 453 504283616 504283290 3.760000e-129 472.0
10 TraesCS3A01G158800 chr4D 90.667 150 13 1 2714 2862 447293810 447293661 7.040000e-47 198.0
11 TraesCS3A01G158800 chr4D 88.125 160 19 0 2703 2862 282407764 282407923 1.180000e-44 191.0
12 TraesCS3A01G158800 chr1B 92.355 327 25 0 127 453 57805354 57805028 1.750000e-127 466.0
13 TraesCS3A01G158800 chr1B 89.815 108 7 3 7 110 429010135 429010028 5.600000e-28 135.0
14 TraesCS3A01G158800 chr6A 92.049 327 26 0 127 453 617752015 617751689 8.130000e-126 460.0
15 TraesCS3A01G158800 chr6A 100.000 28 0 0 1183 1210 262110076 262110103 6.000000e-03 52.8
16 TraesCS3A01G158800 chr5B 92.049 327 26 0 127 453 590180742 590180416 8.130000e-126 460.0
17 TraesCS3A01G158800 chr2D 92.073 328 24 2 127 453 357443058 357443384 8.130000e-126 460.0
18 TraesCS3A01G158800 chr2D 88.496 113 11 2 1 111 118469142 118469254 5.600000e-28 135.0
19 TraesCS3A01G158800 chr2B 92.049 327 26 0 127 453 87168599 87168273 8.130000e-126 460.0
20 TraesCS3A01G158800 chr2B 89.381 113 9 2 1 110 571156169 571156281 4.330000e-29 139.0
21 TraesCS3A01G158800 chr6D 92.049 327 24 2 127 453 377863864 377864188 2.930000e-125 459.0
22 TraesCS3A01G158800 chr6D 100.000 28 0 0 1184 1211 301703803 301703776 6.000000e-03 52.8
23 TraesCS3A01G158800 chr7D 90.459 283 19 1 2936 3218 161467601 161467327 1.820000e-97 366.0
24 TraesCS3A01G158800 chr7D 92.857 196 13 1 3024 3218 214356902 214357097 1.890000e-72 283.0
25 TraesCS3A01G158800 chr7D 89.720 107 8 2 7 110 449447449 449447343 2.010000e-27 134.0
26 TraesCS3A01G158800 chr6B 89.753 283 21 6 2936 3218 23472555 23472281 3.950000e-94 355.0
27 TraesCS3A01G158800 chr5D 91.275 149 13 0 2714 2862 76972623 76972475 1.510000e-48 204.0
28 TraesCS3A01G158800 chr5D 90.604 149 13 1 2714 2862 380078777 380078924 2.530000e-46 196.0
29 TraesCS3A01G158800 chr5D 89.565 115 10 2 7 120 324705613 324705500 9.300000e-31 145.0
30 TraesCS3A01G158800 chr5D 87.500 112 11 2 7 115 535915387 535915276 3.370000e-25 126.0
31 TraesCS3A01G158800 chrUn 90.604 149 14 0 2714 2862 64153175 64153323 7.040000e-47 198.0
32 TraesCS3A01G158800 chrUn 85.600 125 12 2 1 119 46190880 46191004 3.370000e-25 126.0
33 TraesCS3A01G158800 chr1D 90.604 149 14 0 2714 2862 367162534 367162682 7.040000e-47 198.0
34 TraesCS3A01G158800 chr5A 87.500 112 14 0 1 112 381753428 381753539 2.610000e-26 130.0
35 TraesCS3A01G158800 chr7B 100.000 29 0 0 1187 1215 681593116 681593088 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G158800 chr3A 157030960 157034177 3217 False 5943.0 5943 100.000 1 3218 1 chr3A.!!$F1 3217
1 TraesCS3A01G158800 chr3D 138894633 138897246 2613 False 3821.0 3821 93.119 1 2617 1 chr3D.!!$F2 2616
2 TraesCS3A01G158800 chr3B 201885705 201889595 3890 False 1555.6 3051 97.563 574 2553 2 chr3B.!!$F1 1979

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
254 256 0.249911 CTATGGGGCCTTAGCACGAC 60.250 60.0 0.84 0.0 46.55 4.34 F
294 296 0.307760 CAACAAGTTGTGCCCGACTC 59.692 55.0 9.79 0.0 34.00 3.36 F
350 352 0.718343 GCTCGCTTCAGTGCTTGTAG 59.282 55.0 0.00 0.0 0.00 2.74 F
1502 3449 0.320771 GTCGAAGCTGCCAAGAAGGA 60.321 55.0 0.00 0.0 41.22 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1194 3135 0.032217 CCTGCTCTTCCTCCTCCTCT 60.032 60.0 0.0 0.0 0.0 3.69 R
1195 3136 0.032615 TCCTGCTCTTCCTCCTCCTC 60.033 60.0 0.0 0.0 0.0 3.71 R
1532 3479 0.171231 CGTGTCAGAATCCTCAGCGA 59.829 55.0 0.0 0.0 0.0 4.93 R
3041 4994 0.031010 AAGAGAGGATAAGGGGGCGT 60.031 55.0 0.0 0.0 0.0 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.677971 CTTGTTAGGATCCACCGCG 58.322 57.895 15.82 0.00 44.74 6.46
50 51 3.637273 GGCCACCGGAGACAAGGT 61.637 66.667 9.46 0.00 42.34 3.50
111 113 2.133858 TTTTTGGAGGAGGAGGAGGT 57.866 50.000 0.00 0.00 0.00 3.85
112 114 1.362224 TTTTGGAGGAGGAGGAGGTG 58.638 55.000 0.00 0.00 0.00 4.00
115 117 2.366570 GAGGAGGAGGAGGTGGCT 59.633 66.667 0.00 0.00 0.00 4.75
116 118 2.040278 AGGAGGAGGAGGTGGCTG 59.960 66.667 0.00 0.00 0.00 4.85
117 119 3.791586 GGAGGAGGAGGTGGCTGC 61.792 72.222 0.00 0.00 0.00 5.25
120 122 4.767255 GGAGGAGGTGGCTGCGTG 62.767 72.222 0.00 0.00 0.00 5.34
121 123 4.767255 GAGGAGGTGGCTGCGTGG 62.767 72.222 0.00 0.00 0.00 4.94
123 125 4.329545 GGAGGTGGCTGCGTGGAA 62.330 66.667 0.00 0.00 0.00 3.53
124 126 2.045926 GAGGTGGCTGCGTGGAAT 60.046 61.111 0.00 0.00 0.00 3.01
152 154 1.871039 CGGATCTGGTTGTTGTTCGTT 59.129 47.619 0.00 0.00 0.00 3.85
161 163 4.094590 TGGTTGTTGTTCGTTTATGTTCGT 59.905 37.500 0.00 0.00 0.00 3.85
163 165 3.609475 TGTTGTTCGTTTATGTTCGTGC 58.391 40.909 0.00 0.00 0.00 5.34
167 169 2.054687 TCGTTTATGTTCGTGCGTCT 57.945 45.000 0.00 0.00 0.00 4.18
170 172 2.743172 GTTTATGTTCGTGCGTCTTCG 58.257 47.619 0.00 0.00 40.37 3.79
174 176 2.049802 TTCGTGCGTCTTCGGGTC 60.050 61.111 0.00 0.00 37.56 4.46
183 185 0.535797 GTCTTCGGGTCGGATCCTTT 59.464 55.000 10.75 0.00 0.00 3.11
224 226 2.791256 CGGCGGTTGCTGTTATGG 59.209 61.111 0.00 0.00 42.79 2.74
225 227 2.038269 CGGCGGTTGCTGTTATGGT 61.038 57.895 0.00 0.00 42.79 3.55
243 245 0.880718 GTGCGCTAGTTCTATGGGGC 60.881 60.000 9.73 0.00 39.60 5.80
254 256 0.249911 CTATGGGGCCTTAGCACGAC 60.250 60.000 0.84 0.00 46.55 4.34
255 257 0.978667 TATGGGGCCTTAGCACGACA 60.979 55.000 0.84 0.00 46.55 4.35
260 262 0.796927 GGCCTTAGCACGACAACTTC 59.203 55.000 0.00 0.00 42.56 3.01
262 264 1.439679 CCTTAGCACGACAACTTCCC 58.560 55.000 0.00 0.00 0.00 3.97
293 295 2.404083 CAACAAGTTGTGCCCGACT 58.596 52.632 9.79 0.00 36.86 4.18
294 296 0.307760 CAACAAGTTGTGCCCGACTC 59.692 55.000 9.79 0.00 34.00 3.36
297 299 4.681978 AGTTGTGCCCGACTCCGC 62.682 66.667 0.00 0.00 28.47 5.54
350 352 0.718343 GCTCGCTTCAGTGCTTGTAG 59.282 55.000 0.00 0.00 0.00 2.74
366 368 1.965643 TGTAGTCGTTGCTAGGTGGTT 59.034 47.619 0.00 0.00 0.00 3.67
414 417 4.497291 TTCCTGGTGTTCTTTGTACTGT 57.503 40.909 0.00 0.00 0.00 3.55
416 419 3.709653 TCCTGGTGTTCTTTGTACTGTCT 59.290 43.478 0.00 0.00 0.00 3.41
432 435 9.942850 TTGTACTGTCTTGATTGAAGATGAATA 57.057 29.630 0.00 0.00 42.82 1.75
438 441 8.416329 TGTCTTGATTGAAGATGAATAGATCGA 58.584 33.333 0.00 0.00 42.82 3.59
453 456 6.910536 ATAGATCGAAAGTTTTCTCGCAAT 57.089 33.333 0.00 0.00 35.07 3.56
454 457 5.613358 AGATCGAAAGTTTTCTCGCAATT 57.387 34.783 0.00 0.00 35.07 2.32
455 458 6.002062 AGATCGAAAGTTTTCTCGCAATTT 57.998 33.333 0.00 0.00 35.07 1.82
456 459 6.438763 AGATCGAAAGTTTTCTCGCAATTTT 58.561 32.000 0.00 0.00 35.07 1.82
457 460 6.918022 AGATCGAAAGTTTTCTCGCAATTTTT 59.082 30.769 0.00 0.00 35.07 1.94
515 530 6.369615 ACATCAATTCAGCTGGTTAAAAATGC 59.630 34.615 15.13 0.00 0.00 3.56
557 578 5.428184 TGCCCCATAAAATAAAAACCCAG 57.572 39.130 0.00 0.00 0.00 4.45
605 626 6.148976 GTGGATTTTGGTTAGGTGAGAAGTAC 59.851 42.308 0.00 0.00 0.00 2.73
607 628 7.236019 TGGATTTTGGTTAGGTGAGAAGTACTA 59.764 37.037 0.00 0.00 0.00 1.82
608 629 8.098912 GGATTTTGGTTAGGTGAGAAGTACTAA 58.901 37.037 0.00 0.00 0.00 2.24
611 632 6.830873 TGGTTAGGTGAGAAGTACTAACTC 57.169 41.667 17.65 17.65 42.85 3.01
615 2555 7.281999 GGTTAGGTGAGAAGTACTAACTCGTAT 59.718 40.741 18.60 12.10 42.85 3.06
617 2557 7.086230 AGGTGAGAAGTACTAACTCGTATTG 57.914 40.000 18.60 0.00 33.75 1.90
622 2562 9.121658 TGAGAAGTACTAACTCGTATTGATCAT 57.878 33.333 18.60 0.00 33.75 2.45
674 2615 5.373222 ACTGAGATGTAGAGCCTACTGTAG 58.627 45.833 7.87 7.87 0.00 2.74
679 2620 3.024547 TGTAGAGCCTACTGTAGCTTGG 58.975 50.000 9.35 0.00 40.11 3.61
680 2621 2.239681 AGAGCCTACTGTAGCTTGGT 57.760 50.000 9.35 1.95 40.11 3.67
717 2658 9.765795 AGTATATCAGTATTGGTTTAAGCACTC 57.234 33.333 0.00 0.00 0.00 3.51
718 2659 8.989980 GTATATCAGTATTGGTTTAAGCACTCC 58.010 37.037 0.00 0.00 0.00 3.85
907 2848 1.288439 CATCGCATCCTCTCCTCCG 59.712 63.158 0.00 0.00 0.00 4.63
941 2882 1.437160 CACAGCCACAAAAGCCGTT 59.563 52.632 0.00 0.00 0.00 4.44
1074 3015 4.767255 GCCACCAGCGTCTCCCTG 62.767 72.222 0.00 0.00 0.00 4.45
1194 3135 2.159558 CGAAGACGACGATGAAGAGGAA 60.160 50.000 0.00 0.00 42.66 3.36
1195 3136 3.430931 GAAGACGACGATGAAGAGGAAG 58.569 50.000 0.00 0.00 0.00 3.46
1196 3137 2.712709 AGACGACGATGAAGAGGAAGA 58.287 47.619 0.00 0.00 0.00 2.87
1319 3266 0.538287 GTGAGCAAGGCCCTTGAAGT 60.538 55.000 27.54 10.31 43.42 3.01
1351 3298 1.901650 GCTCGACTCCAAGCAAACGG 61.902 60.000 0.00 0.00 38.42 4.44
1502 3449 0.320771 GTCGAAGCTGCCAAGAAGGA 60.321 55.000 0.00 0.00 41.22 3.36
1553 3500 1.402852 CGCTGAGGATTCTGACACGAA 60.403 52.381 0.00 0.00 0.00 3.85
1561 3508 0.034896 TTCTGACACGAAGAAGCCCC 59.965 55.000 0.00 0.00 0.00 5.80
1695 3642 4.848685 CCGTTTGAGGGGTATCCG 57.151 61.111 0.00 0.00 41.52 4.18
2174 4121 4.803426 GGTCGAGAGGTGCGGCAG 62.803 72.222 1.18 0.00 34.56 4.85
2218 4165 2.439156 GCCCCATCTGCCACTGAC 60.439 66.667 0.00 0.00 0.00 3.51
2243 4190 2.733227 GCTCCAAACTTTCATCCATGCG 60.733 50.000 0.00 0.00 0.00 4.73
2322 4269 8.798859 AAATCAAAGCATGTTCTCTGTAGTAT 57.201 30.769 0.00 0.00 0.00 2.12
2323 4270 9.890629 AAATCAAAGCATGTTCTCTGTAGTATA 57.109 29.630 0.00 0.00 0.00 1.47
2325 4272 8.877808 TCAAAGCATGTTCTCTGTAGTATATG 57.122 34.615 0.00 0.00 0.00 1.78
2326 4273 7.928167 TCAAAGCATGTTCTCTGTAGTATATGG 59.072 37.037 0.00 0.00 0.00 2.74
2327 4274 7.603180 AAGCATGTTCTCTGTAGTATATGGA 57.397 36.000 0.00 0.00 0.00 3.41
2328 4275 7.603180 AGCATGTTCTCTGTAGTATATGGAA 57.397 36.000 0.00 0.00 0.00 3.53
2329 4276 8.200024 AGCATGTTCTCTGTAGTATATGGAAT 57.800 34.615 0.00 0.00 0.00 3.01
2330 4277 9.314133 AGCATGTTCTCTGTAGTATATGGAATA 57.686 33.333 0.00 0.00 0.00 1.75
2331 4278 9.360093 GCATGTTCTCTGTAGTATATGGAATAC 57.640 37.037 0.00 0.00 0.00 1.89
2332 4279 9.561270 CATGTTCTCTGTAGTATATGGAATACG 57.439 37.037 0.00 0.00 0.00 3.06
2334 4281 7.722728 TGTTCTCTGTAGTATATGGAATACGGT 59.277 37.037 0.00 0.00 0.00 4.83
2397 4347 0.744281 AAGGAAAACTTGGGCGTGTG 59.256 50.000 0.00 0.00 38.21 3.82
2403 4353 2.026014 CTTGGGCGTGTGTTGTGC 59.974 61.111 0.00 0.00 0.00 4.57
2490 4443 4.589908 AGAAAATGAGTATGGCTTCGGTT 58.410 39.130 0.00 0.00 0.00 4.44
2510 4463 5.872617 CGGTTGTAGTTATCCTTGTCAATGA 59.127 40.000 0.00 0.00 0.00 2.57
2520 4473 2.684881 CCTTGTCAATGATGGTGGTAGC 59.315 50.000 0.00 0.00 0.00 3.58
2531 4484 4.716784 TGATGGTGGTAGCAGTAGAGATTT 59.283 41.667 0.00 0.00 0.00 2.17
2532 4485 4.471904 TGGTGGTAGCAGTAGAGATTTG 57.528 45.455 0.00 0.00 0.00 2.32
2533 4486 3.838317 TGGTGGTAGCAGTAGAGATTTGT 59.162 43.478 0.00 0.00 0.00 2.83
2556 4509 1.845627 TTTGCTAGAGCTGCTGGGCT 61.846 55.000 7.01 0.00 46.11 5.19
2557 4510 2.203042 GCTAGAGCTGCTGGGCTG 60.203 66.667 7.01 0.00 43.20 4.85
2617 4570 1.597854 CTTGTGAACCAGCTCGGCA 60.598 57.895 2.50 0.00 39.03 5.69
2618 4571 1.153066 TTGTGAACCAGCTCGGCAA 60.153 52.632 2.50 0.00 39.03 4.52
2619 4572 1.165907 TTGTGAACCAGCTCGGCAAG 61.166 55.000 2.50 0.00 39.03 4.01
2628 4581 3.485431 CTCGGCAAGCACAGCTCG 61.485 66.667 0.00 0.00 38.25 5.03
2633 4586 3.485431 CAAGCACAGCTCGCGGAG 61.485 66.667 6.13 3.47 38.25 4.63
2634 4587 3.684990 AAGCACAGCTCGCGGAGA 61.685 61.111 6.13 0.00 38.25 3.71
2635 4588 3.011635 AAGCACAGCTCGCGGAGAT 62.012 57.895 6.13 0.00 38.25 2.75
2640 4593 3.847621 AGCTCGCGGAGATGATGA 58.152 55.556 6.13 0.00 0.00 2.92
2641 4594 2.119009 AGCTCGCGGAGATGATGAA 58.881 52.632 6.13 0.00 0.00 2.57
2642 4595 0.031857 AGCTCGCGGAGATGATGAAG 59.968 55.000 6.13 0.00 0.00 3.02
2643 4596 0.249238 GCTCGCGGAGATGATGAAGT 60.249 55.000 6.13 0.00 0.00 3.01
2644 4597 1.485397 CTCGCGGAGATGATGAAGTG 58.515 55.000 6.13 0.00 0.00 3.16
2645 4598 0.817654 TCGCGGAGATGATGAAGTGT 59.182 50.000 6.13 0.00 0.00 3.55
2646 4599 1.202302 TCGCGGAGATGATGAAGTGTC 60.202 52.381 6.13 0.00 0.00 3.67
2647 4600 1.469767 CGCGGAGATGATGAAGTGTCA 60.470 52.381 0.00 0.00 38.41 3.58
2649 4602 2.543012 GCGGAGATGATGAAGTGTCATG 59.457 50.000 0.00 0.00 44.83 3.07
2650 4603 3.790091 CGGAGATGATGAAGTGTCATGT 58.210 45.455 0.00 0.00 44.83 3.21
2651 4604 3.801050 CGGAGATGATGAAGTGTCATGTC 59.199 47.826 5.09 5.09 44.83 3.06
2652 4605 3.801050 GGAGATGATGAAGTGTCATGTCG 59.199 47.826 7.03 0.00 44.83 4.35
2653 4606 4.428209 GAGATGATGAAGTGTCATGTCGT 58.572 43.478 0.00 0.00 44.83 4.34
2654 4607 4.179298 AGATGATGAAGTGTCATGTCGTG 58.821 43.478 0.00 0.00 44.83 4.35
2655 4608 3.658757 TGATGAAGTGTCATGTCGTGA 57.341 42.857 0.00 0.00 44.83 4.35
2656 4609 4.192429 TGATGAAGTGTCATGTCGTGAT 57.808 40.909 0.00 0.00 44.83 3.06
2657 4610 4.568956 TGATGAAGTGTCATGTCGTGATT 58.431 39.130 0.00 0.00 44.83 2.57
2658 4611 4.627035 TGATGAAGTGTCATGTCGTGATTC 59.373 41.667 0.00 0.00 44.83 2.52
2659 4612 3.988819 TGAAGTGTCATGTCGTGATTCA 58.011 40.909 0.00 2.10 39.48 2.57
2660 4613 4.376146 TGAAGTGTCATGTCGTGATTCAA 58.624 39.130 6.98 0.00 39.48 2.69
2661 4614 4.813697 TGAAGTGTCATGTCGTGATTCAAA 59.186 37.500 6.98 0.00 39.48 2.69
2662 4615 5.469760 TGAAGTGTCATGTCGTGATTCAAAT 59.530 36.000 6.98 0.00 39.48 2.32
2663 4616 5.947228 AGTGTCATGTCGTGATTCAAATT 57.053 34.783 0.00 0.00 39.48 1.82
2664 4617 5.931532 AGTGTCATGTCGTGATTCAAATTC 58.068 37.500 0.00 0.00 39.48 2.17
2665 4618 5.469760 AGTGTCATGTCGTGATTCAAATTCA 59.530 36.000 0.00 0.00 39.48 2.57
2666 4619 5.791974 GTGTCATGTCGTGATTCAAATTCAG 59.208 40.000 0.00 0.00 39.48 3.02
2667 4620 5.469760 TGTCATGTCGTGATTCAAATTCAGT 59.530 36.000 0.00 0.00 39.48 3.41
2668 4621 6.648725 TGTCATGTCGTGATTCAAATTCAGTA 59.351 34.615 0.00 0.00 39.48 2.74
2669 4622 7.334171 TGTCATGTCGTGATTCAAATTCAGTAT 59.666 33.333 0.00 0.00 39.48 2.12
2670 4623 8.817100 GTCATGTCGTGATTCAAATTCAGTATA 58.183 33.333 0.00 0.00 39.48 1.47
2671 4624 9.377312 TCATGTCGTGATTCAAATTCAGTATAA 57.623 29.630 0.00 0.00 0.00 0.98
2672 4625 9.986833 CATGTCGTGATTCAAATTCAGTATAAA 57.013 29.630 0.00 0.00 0.00 1.40
2674 4627 9.430623 TGTCGTGATTCAAATTCAGTATAAAGA 57.569 29.630 0.00 0.00 0.00 2.52
2703 4656 1.933247 CTTCTGATGAAGCGAGACCC 58.067 55.000 0.00 0.00 42.50 4.46
2704 4657 0.173481 TTCTGATGAAGCGAGACCCG 59.827 55.000 0.00 0.00 42.21 5.28
2705 4658 0.965866 TCTGATGAAGCGAGACCCGT 60.966 55.000 0.00 0.00 41.15 5.28
2706 4659 0.526524 CTGATGAAGCGAGACCCGTC 60.527 60.000 0.00 0.00 41.15 4.79
2707 4660 1.586564 GATGAAGCGAGACCCGTCG 60.587 63.158 0.00 0.00 43.08 5.12
2708 4661 2.267681 GATGAAGCGAGACCCGTCGT 62.268 60.000 0.00 0.00 42.17 4.34
2709 4662 2.202453 GAAGCGAGACCCGTCGTC 60.202 66.667 0.00 0.00 42.17 4.20
2710 4663 3.996744 GAAGCGAGACCCGTCGTCG 62.997 68.421 10.42 10.42 46.92 5.12
2752 4705 3.060615 CTGGGCAGCTGAGGTTGC 61.061 66.667 20.43 0.23 46.58 4.17
2753 4706 3.564345 CTGGGCAGCTGAGGTTGCT 62.564 63.158 20.43 0.00 46.51 3.91
2758 4711 2.033757 AGCTGAGGTTGCTGCCAG 59.966 61.111 0.00 0.00 39.56 4.85
2759 4712 3.745803 GCTGAGGTTGCTGCCAGC 61.746 66.667 10.45 10.45 44.00 4.85
2760 4713 3.060615 CTGAGGTTGCTGCCAGCC 61.061 66.667 15.29 0.00 41.51 4.85
2761 4714 4.666253 TGAGGTTGCTGCCAGCCC 62.666 66.667 15.29 9.16 42.79 5.19
2762 4715 4.666253 GAGGTTGCTGCCAGCCCA 62.666 66.667 15.29 0.00 42.79 5.36
2763 4716 3.951769 GAGGTTGCTGCCAGCCCAT 62.952 63.158 15.29 1.83 42.79 4.00
2764 4717 3.455469 GGTTGCTGCCAGCCCATC 61.455 66.667 15.29 0.00 41.51 3.51
2765 4718 3.455469 GTTGCTGCCAGCCCATCC 61.455 66.667 15.29 0.00 41.51 3.51
2768 4721 4.802051 GCTGCCAGCCCATCCGAA 62.802 66.667 5.06 0.00 34.48 4.30
2769 4722 2.194056 CTGCCAGCCCATCCGAAT 59.806 61.111 0.00 0.00 0.00 3.34
2770 4723 1.454479 CTGCCAGCCCATCCGAATT 60.454 57.895 0.00 0.00 0.00 2.17
2771 4724 1.450531 CTGCCAGCCCATCCGAATTC 61.451 60.000 0.00 0.00 0.00 2.17
2772 4725 2.546494 GCCAGCCCATCCGAATTCG 61.546 63.158 20.92 20.92 39.44 3.34
2773 4726 1.146041 CCAGCCCATCCGAATTCGA 59.854 57.895 28.76 14.98 43.02 3.71
2774 4727 0.882042 CCAGCCCATCCGAATTCGAG 60.882 60.000 28.76 18.02 43.02 4.04
2775 4728 0.179073 CAGCCCATCCGAATTCGAGT 60.179 55.000 28.76 13.70 43.02 4.18
2776 4729 0.541863 AGCCCATCCGAATTCGAGTT 59.458 50.000 28.76 10.10 43.02 3.01
2777 4730 1.065418 AGCCCATCCGAATTCGAGTTT 60.065 47.619 28.76 7.61 43.02 2.66
2778 4731 1.330829 GCCCATCCGAATTCGAGTTTC 59.669 52.381 28.76 9.40 43.02 2.78
2779 4732 1.593006 CCCATCCGAATTCGAGTTTCG 59.407 52.381 28.76 19.71 44.17 3.46
2783 4736 3.562869 CGAATTCGAGTTTCGGCAC 57.437 52.632 23.29 0.00 41.62 5.01
2803 4756 4.634703 ACGCGTGGTGCCCATGAA 62.635 61.111 12.93 0.00 42.73 2.57
2804 4757 3.803082 CGCGTGGTGCCCATGAAG 61.803 66.667 15.31 6.37 42.73 3.02
2805 4758 2.672996 GCGTGGTGCCCATGAAGT 60.673 61.111 15.31 0.00 42.73 3.01
2806 4759 2.268076 GCGTGGTGCCCATGAAGTT 61.268 57.895 15.31 0.00 42.73 2.66
2807 4760 1.805428 GCGTGGTGCCCATGAAGTTT 61.805 55.000 15.31 0.00 42.73 2.66
2808 4761 0.240945 CGTGGTGCCCATGAAGTTTC 59.759 55.000 7.47 0.00 42.73 2.78
2809 4762 1.620822 GTGGTGCCCATGAAGTTTCT 58.379 50.000 0.00 0.00 35.28 2.52
2810 4763 1.541588 GTGGTGCCCATGAAGTTTCTC 59.458 52.381 0.00 0.00 35.28 2.87
2811 4764 1.177401 GGTGCCCATGAAGTTTCTCC 58.823 55.000 0.00 0.00 0.00 3.71
2812 4765 1.272147 GGTGCCCATGAAGTTTCTCCT 60.272 52.381 0.00 0.00 0.00 3.69
2813 4766 2.026262 GGTGCCCATGAAGTTTCTCCTA 60.026 50.000 0.00 0.00 0.00 2.94
2814 4767 3.372025 GGTGCCCATGAAGTTTCTCCTAT 60.372 47.826 0.00 0.00 0.00 2.57
2815 4768 4.141482 GGTGCCCATGAAGTTTCTCCTATA 60.141 45.833 0.00 0.00 0.00 1.31
2816 4769 5.437060 GTGCCCATGAAGTTTCTCCTATAA 58.563 41.667 0.00 0.00 0.00 0.98
2817 4770 5.885912 GTGCCCATGAAGTTTCTCCTATAAA 59.114 40.000 0.00 0.00 0.00 1.40
2818 4771 6.038714 GTGCCCATGAAGTTTCTCCTATAAAG 59.961 42.308 0.00 0.00 0.00 1.85
2819 4772 6.069673 TGCCCATGAAGTTTCTCCTATAAAGA 60.070 38.462 0.00 0.00 0.00 2.52
2820 4773 6.828785 GCCCATGAAGTTTCTCCTATAAAGAA 59.171 38.462 0.00 0.00 0.00 2.52
2821 4774 7.339466 GCCCATGAAGTTTCTCCTATAAAGAAA 59.661 37.037 0.00 6.06 39.72 2.52
2822 4775 9.243105 CCCATGAAGTTTCTCCTATAAAGAAAA 57.757 33.333 10.15 0.00 42.63 2.29
2834 4787 9.907229 CTCCTATAAAGAAAAGTCAATAAGGGT 57.093 33.333 0.00 0.00 0.00 4.34
2839 4792 6.835819 AAGAAAAGTCAATAAGGGTTAGGC 57.164 37.500 0.00 0.00 0.00 3.93
2840 4793 5.262009 AGAAAAGTCAATAAGGGTTAGGCC 58.738 41.667 0.00 0.00 0.00 5.19
2841 4794 4.948062 AAAGTCAATAAGGGTTAGGCCT 57.052 40.909 11.78 11.78 37.43 5.19
2842 4795 4.948062 AAGTCAATAAGGGTTAGGCCTT 57.052 40.909 12.58 0.00 37.43 4.35
2843 4796 4.236527 AGTCAATAAGGGTTAGGCCTTG 57.763 45.455 12.58 0.00 37.43 3.61
2844 4797 3.053619 AGTCAATAAGGGTTAGGCCTTGG 60.054 47.826 12.58 0.00 37.43 3.61
2845 4798 2.243736 TCAATAAGGGTTAGGCCTTGGG 59.756 50.000 12.58 0.00 37.43 4.12
2846 4799 1.995868 ATAAGGGTTAGGCCTTGGGT 58.004 50.000 12.58 0.00 37.43 4.51
2847 4800 1.763018 TAAGGGTTAGGCCTTGGGTT 58.237 50.000 12.58 1.02 37.43 4.11
2848 4801 0.114364 AAGGGTTAGGCCTTGGGTTG 59.886 55.000 12.58 0.00 37.43 3.77
2849 4802 0.774491 AGGGTTAGGCCTTGGGTTGA 60.774 55.000 12.58 0.00 37.43 3.18
2850 4803 0.335019 GGGTTAGGCCTTGGGTTGAT 59.665 55.000 12.58 0.00 37.43 2.57
2851 4804 1.685180 GGGTTAGGCCTTGGGTTGATC 60.685 57.143 12.58 0.00 37.43 2.92
2852 4805 1.285078 GGTTAGGCCTTGGGTTGATCT 59.715 52.381 12.58 0.00 0.00 2.75
2853 4806 2.644676 GTTAGGCCTTGGGTTGATCTC 58.355 52.381 12.58 0.00 0.00 2.75
2854 4807 1.965414 TAGGCCTTGGGTTGATCTCA 58.035 50.000 12.58 0.00 0.00 3.27
2855 4808 1.302907 AGGCCTTGGGTTGATCTCAT 58.697 50.000 0.00 0.00 0.00 2.90
2856 4809 1.642762 AGGCCTTGGGTTGATCTCATT 59.357 47.619 0.00 0.00 0.00 2.57
2857 4810 2.043526 AGGCCTTGGGTTGATCTCATTT 59.956 45.455 0.00 0.00 0.00 2.32
2858 4811 2.833943 GGCCTTGGGTTGATCTCATTTT 59.166 45.455 0.00 0.00 0.00 1.82
2859 4812 3.261643 GGCCTTGGGTTGATCTCATTTTT 59.738 43.478 0.00 0.00 0.00 1.94
2886 4839 3.477504 CGTCGTCGGTAGGTTTTGA 57.522 52.632 0.00 0.00 0.00 2.69
2887 4840 1.055338 CGTCGTCGGTAGGTTTTGAC 58.945 55.000 0.00 0.00 0.00 3.18
2888 4841 1.422388 GTCGTCGGTAGGTTTTGACC 58.578 55.000 0.00 0.00 0.00 4.02
2894 4847 0.794473 GGTAGGTTTTGACCGAAGCG 59.206 55.000 0.00 0.00 34.28 4.68
2919 4872 3.318017 CGAAGCGAAGTTAGGATATGGG 58.682 50.000 0.00 0.00 0.00 4.00
2920 4873 2.841442 AGCGAAGTTAGGATATGGGC 57.159 50.000 0.00 0.00 0.00 5.36
2921 4874 1.348036 AGCGAAGTTAGGATATGGGCC 59.652 52.381 0.00 0.00 0.00 5.80
2922 4875 1.610886 GCGAAGTTAGGATATGGGCCC 60.611 57.143 17.59 17.59 0.00 5.80
2923 4876 1.978580 CGAAGTTAGGATATGGGCCCT 59.021 52.381 25.70 11.37 36.60 5.19
2924 4877 2.372172 CGAAGTTAGGATATGGGCCCTT 59.628 50.000 25.70 20.41 34.11 3.95
2925 4878 3.756117 GAAGTTAGGATATGGGCCCTTG 58.244 50.000 25.70 0.00 34.11 3.61
2926 4879 1.425448 AGTTAGGATATGGGCCCTTGC 59.575 52.381 25.70 13.28 34.11 4.01
2927 4880 1.144913 GTTAGGATATGGGCCCTTGCA 59.855 52.381 25.70 1.52 40.13 4.08
2928 4881 1.528600 TAGGATATGGGCCCTTGCAA 58.471 50.000 25.70 1.02 40.13 4.08
2929 4882 0.636101 AGGATATGGGCCCTTGCAAA 59.364 50.000 25.70 0.07 40.13 3.68
2930 4883 1.008206 AGGATATGGGCCCTTGCAAAA 59.992 47.619 25.70 0.00 40.13 2.44
2931 4884 1.836802 GGATATGGGCCCTTGCAAAAA 59.163 47.619 25.70 0.00 40.13 1.94
2932 4885 2.158914 GGATATGGGCCCTTGCAAAAAG 60.159 50.000 25.70 0.00 40.13 2.27
2933 4886 1.274712 TATGGGCCCTTGCAAAAAGG 58.725 50.000 25.70 2.86 40.13 3.11
2934 4887 0.473501 ATGGGCCCTTGCAAAAAGGA 60.474 50.000 25.70 0.00 39.81 3.36
2935 4888 0.692419 TGGGCCCTTGCAAAAAGGAA 60.692 50.000 25.70 0.00 39.81 3.36
2936 4889 0.472044 GGGCCCTTGCAAAAAGGAAA 59.528 50.000 17.04 0.00 39.81 3.13
2937 4890 1.133945 GGGCCCTTGCAAAAAGGAAAA 60.134 47.619 17.04 0.00 39.81 2.29
2938 4891 2.488891 GGGCCCTTGCAAAAAGGAAAAT 60.489 45.455 17.04 0.00 39.81 1.82
2939 4892 2.553602 GGCCCTTGCAAAAAGGAAAATG 59.446 45.455 12.74 0.00 39.81 2.32
2940 4893 3.213506 GCCCTTGCAAAAAGGAAAATGT 58.786 40.909 12.74 0.00 39.81 2.71
2941 4894 3.631686 GCCCTTGCAAAAAGGAAAATGTT 59.368 39.130 12.74 0.00 39.81 2.71
2942 4895 4.097741 GCCCTTGCAAAAAGGAAAATGTTT 59.902 37.500 12.74 0.00 39.81 2.83
2943 4896 5.580661 CCCTTGCAAAAAGGAAAATGTTTG 58.419 37.500 4.39 0.00 39.81 2.93
2944 4897 5.450274 CCCTTGCAAAAAGGAAAATGTTTGG 60.450 40.000 4.39 0.00 39.81 3.28
2945 4898 5.450274 CCTTGCAAAAAGGAAAATGTTTGGG 60.450 40.000 0.00 0.00 39.81 4.12
2946 4899 4.593956 TGCAAAAAGGAAAATGTTTGGGT 58.406 34.783 0.00 0.00 32.73 4.51
2947 4900 5.745227 TGCAAAAAGGAAAATGTTTGGGTA 58.255 33.333 0.00 0.00 32.73 3.69
2948 4901 5.586643 TGCAAAAAGGAAAATGTTTGGGTAC 59.413 36.000 0.00 0.00 32.73 3.34
2949 4902 5.277106 GCAAAAAGGAAAATGTTTGGGTACG 60.277 40.000 0.00 0.00 32.73 3.67
2950 4903 4.594123 AAAGGAAAATGTTTGGGTACGG 57.406 40.909 0.00 0.00 0.00 4.02
2951 4904 1.890489 AGGAAAATGTTTGGGTACGGC 59.110 47.619 0.00 0.00 0.00 5.68
2952 4905 1.614413 GGAAAATGTTTGGGTACGGCA 59.386 47.619 0.00 0.00 0.00 5.69
2953 4906 2.608506 GGAAAATGTTTGGGTACGGCAC 60.609 50.000 0.00 0.00 0.00 5.01
2954 4907 1.693627 AAATGTTTGGGTACGGCACA 58.306 45.000 0.00 0.00 0.00 4.57
2955 4908 0.955905 AATGTTTGGGTACGGCACAC 59.044 50.000 0.00 0.00 0.00 3.82
2956 4909 0.891904 ATGTTTGGGTACGGCACACC 60.892 55.000 0.00 0.00 35.15 4.16
2966 4919 3.727146 GGCACACCGTTCGAAACT 58.273 55.556 0.00 0.00 0.00 2.66
2967 4920 2.019337 GGCACACCGTTCGAAACTT 58.981 52.632 0.00 0.00 0.00 2.66
2968 4921 0.041576 GGCACACCGTTCGAAACTTC 60.042 55.000 0.00 0.00 0.00 3.01
2977 4930 2.048503 CGAAACTTCGGCCGGTCT 60.049 61.111 27.83 1.73 46.30 3.85
2978 4931 2.092882 CGAAACTTCGGCCGGTCTC 61.093 63.158 27.83 11.69 46.30 3.36
2979 4932 2.048503 AAACTTCGGCCGGTCTCG 60.049 61.111 27.83 11.66 0.00 4.04
2980 4933 4.736896 AACTTCGGCCGGTCTCGC 62.737 66.667 27.83 0.00 34.56 5.03
2998 4951 2.808315 GAGCTCGCTCGATCCCAA 59.192 61.111 0.00 0.00 33.06 4.12
2999 4952 1.141881 GAGCTCGCTCGATCCCAAA 59.858 57.895 0.00 0.00 33.06 3.28
3000 4953 0.249657 GAGCTCGCTCGATCCCAAAT 60.250 55.000 0.00 0.00 33.06 2.32
3001 4954 0.179000 AGCTCGCTCGATCCCAAATT 59.821 50.000 0.00 0.00 0.00 1.82
3002 4955 0.583917 GCTCGCTCGATCCCAAATTC 59.416 55.000 0.00 0.00 0.00 2.17
3003 4956 1.221414 CTCGCTCGATCCCAAATTCC 58.779 55.000 0.00 0.00 0.00 3.01
3004 4957 0.179056 TCGCTCGATCCCAAATTCCC 60.179 55.000 0.00 0.00 0.00 3.97
3005 4958 0.463654 CGCTCGATCCCAAATTCCCA 60.464 55.000 0.00 0.00 0.00 4.37
3006 4959 1.762708 GCTCGATCCCAAATTCCCAA 58.237 50.000 0.00 0.00 0.00 4.12
3007 4960 2.310538 GCTCGATCCCAAATTCCCAAT 58.689 47.619 0.00 0.00 0.00 3.16
3008 4961 2.695147 GCTCGATCCCAAATTCCCAATT 59.305 45.455 0.00 0.00 0.00 2.32
3009 4962 3.888930 GCTCGATCCCAAATTCCCAATTA 59.111 43.478 0.00 0.00 0.00 1.40
3010 4963 4.340950 GCTCGATCCCAAATTCCCAATTAA 59.659 41.667 0.00 0.00 0.00 1.40
3011 4964 5.011023 GCTCGATCCCAAATTCCCAATTAAT 59.989 40.000 0.00 0.00 0.00 1.40
3012 4965 6.648879 TCGATCCCAAATTCCCAATTAATC 57.351 37.500 0.00 0.00 0.00 1.75
3013 4966 6.372931 TCGATCCCAAATTCCCAATTAATCT 58.627 36.000 0.00 0.00 0.00 2.40
3014 4967 6.265196 TCGATCCCAAATTCCCAATTAATCTG 59.735 38.462 0.00 0.00 0.00 2.90
3015 4968 6.265196 CGATCCCAAATTCCCAATTAATCTGA 59.735 38.462 0.00 0.00 0.00 3.27
3016 4969 7.039504 CGATCCCAAATTCCCAATTAATCTGAT 60.040 37.037 0.00 0.00 0.00 2.90
3017 4970 7.601705 TCCCAAATTCCCAATTAATCTGATC 57.398 36.000 0.00 0.00 0.00 2.92
3018 4971 7.364627 TCCCAAATTCCCAATTAATCTGATCT 58.635 34.615 0.00 0.00 0.00 2.75
3019 4972 7.288389 TCCCAAATTCCCAATTAATCTGATCTG 59.712 37.037 0.00 0.00 0.00 2.90
3020 4973 7.439381 CCAAATTCCCAATTAATCTGATCTGG 58.561 38.462 0.00 0.00 0.00 3.86
3021 4974 6.661304 AATTCCCAATTAATCTGATCTGGC 57.339 37.500 0.00 0.00 0.00 4.85
3022 4975 3.743521 TCCCAATTAATCTGATCTGGCG 58.256 45.455 0.00 0.00 0.00 5.69
3023 4976 2.816087 CCCAATTAATCTGATCTGGCGG 59.184 50.000 0.00 0.00 0.00 6.13
3024 4977 3.480470 CCAATTAATCTGATCTGGCGGT 58.520 45.455 0.00 0.00 0.00 5.68
3025 4978 3.499918 CCAATTAATCTGATCTGGCGGTC 59.500 47.826 0.00 0.00 0.00 4.79
3026 4979 4.384056 CAATTAATCTGATCTGGCGGTCT 58.616 43.478 0.00 0.00 0.00 3.85
3027 4980 3.735237 TTAATCTGATCTGGCGGTCTC 57.265 47.619 0.00 0.00 0.00 3.36
3028 4981 0.387202 AATCTGATCTGGCGGTCTCG 59.613 55.000 0.00 0.00 39.81 4.04
3029 4982 0.753479 ATCTGATCTGGCGGTCTCGT 60.753 55.000 0.00 0.00 38.89 4.18
3030 4983 0.965866 TCTGATCTGGCGGTCTCGTT 60.966 55.000 0.00 0.00 38.89 3.85
3031 4984 0.108615 CTGATCTGGCGGTCTCGTTT 60.109 55.000 0.00 0.00 38.89 3.60
3032 4985 0.320374 TGATCTGGCGGTCTCGTTTT 59.680 50.000 0.00 0.00 38.89 2.43
3033 4986 1.270625 TGATCTGGCGGTCTCGTTTTT 60.271 47.619 0.00 0.00 38.89 1.94
3034 4987 1.393883 GATCTGGCGGTCTCGTTTTTC 59.606 52.381 0.00 0.00 38.89 2.29
3035 4988 0.601841 TCTGGCGGTCTCGTTTTTCC 60.602 55.000 0.00 0.00 38.89 3.13
3036 4989 1.574702 CTGGCGGTCTCGTTTTTCCC 61.575 60.000 0.00 0.00 38.89 3.97
3037 4990 2.674084 GGCGGTCTCGTTTTTCCCG 61.674 63.158 0.00 0.00 41.50 5.14
3038 4991 2.858158 CGGTCTCGTTTTTCCCGC 59.142 61.111 0.00 0.00 0.00 6.13
3039 4992 1.957186 CGGTCTCGTTTTTCCCGCA 60.957 57.895 0.00 0.00 0.00 5.69
3040 4993 1.572941 GGTCTCGTTTTTCCCGCAC 59.427 57.895 0.00 0.00 0.00 5.34
3041 4994 1.161563 GGTCTCGTTTTTCCCGCACA 61.162 55.000 0.00 0.00 0.00 4.57
3042 4995 0.041576 GTCTCGTTTTTCCCGCACAC 60.042 55.000 0.00 0.00 0.00 3.82
3043 4996 1.083015 CTCGTTTTTCCCGCACACG 60.083 57.895 0.00 0.00 39.67 4.49
3044 4997 2.724358 CGTTTTTCCCGCACACGC 60.724 61.111 0.00 0.00 38.22 5.34
3045 4998 2.354188 GTTTTTCCCGCACACGCC 60.354 61.111 0.00 0.00 38.22 5.68
3046 4999 3.597728 TTTTTCCCGCACACGCCC 61.598 61.111 0.00 0.00 38.22 6.13
3052 5005 4.483243 CCGCACACGCCCCCTTAT 62.483 66.667 0.00 0.00 38.22 1.73
3053 5006 2.895372 CGCACACGCCCCCTTATC 60.895 66.667 0.00 0.00 33.11 1.75
3054 5007 2.516225 GCACACGCCCCCTTATCC 60.516 66.667 0.00 0.00 0.00 2.59
3055 5008 3.043999 GCACACGCCCCCTTATCCT 62.044 63.158 0.00 0.00 0.00 3.24
3056 5009 1.146263 CACACGCCCCCTTATCCTC 59.854 63.158 0.00 0.00 0.00 3.71
3057 5010 1.003051 ACACGCCCCCTTATCCTCT 59.997 57.895 0.00 0.00 0.00 3.69
3058 5011 1.049289 ACACGCCCCCTTATCCTCTC 61.049 60.000 0.00 0.00 0.00 3.20
3059 5012 0.760945 CACGCCCCCTTATCCTCTCT 60.761 60.000 0.00 0.00 0.00 3.10
3060 5013 0.031010 ACGCCCCCTTATCCTCTCTT 60.031 55.000 0.00 0.00 0.00 2.85
3061 5014 0.682292 CGCCCCCTTATCCTCTCTTC 59.318 60.000 0.00 0.00 0.00 2.87
3062 5015 1.060729 GCCCCCTTATCCTCTCTTCC 58.939 60.000 0.00 0.00 0.00 3.46
3063 5016 1.343069 CCCCCTTATCCTCTCTTCCG 58.657 60.000 0.00 0.00 0.00 4.30
3064 5017 0.682292 CCCCTTATCCTCTCTTCCGC 59.318 60.000 0.00 0.00 0.00 5.54
3065 5018 0.682292 CCCTTATCCTCTCTTCCGCC 59.318 60.000 0.00 0.00 0.00 6.13
3066 5019 0.682292 CCTTATCCTCTCTTCCGCCC 59.318 60.000 0.00 0.00 0.00 6.13
3067 5020 0.682292 CTTATCCTCTCTTCCGCCCC 59.318 60.000 0.00 0.00 0.00 5.80
3068 5021 1.113517 TTATCCTCTCTTCCGCCCCG 61.114 60.000 0.00 0.00 0.00 5.73
3071 5024 4.214327 CTCTCTTCCGCCCCGCTC 62.214 72.222 0.00 0.00 0.00 5.03
3072 5025 4.761058 TCTCTTCCGCCCCGCTCT 62.761 66.667 0.00 0.00 0.00 4.09
3073 5026 3.775654 CTCTTCCGCCCCGCTCTT 61.776 66.667 0.00 0.00 0.00 2.85
3074 5027 4.082523 TCTTCCGCCCCGCTCTTG 62.083 66.667 0.00 0.00 0.00 3.02
3100 5053 3.241059 CAGCGAGCGTGCGTCTAC 61.241 66.667 0.00 0.00 40.67 2.59
3101 5054 3.432588 AGCGAGCGTGCGTCTACT 61.433 61.111 0.00 0.00 40.67 2.57
3102 5055 3.241059 GCGAGCGTGCGTCTACTG 61.241 66.667 0.00 0.00 0.00 2.74
3103 5056 3.241059 CGAGCGTGCGTCTACTGC 61.241 66.667 0.00 0.00 0.00 4.40
3104 5057 2.126463 GAGCGTGCGTCTACTGCA 60.126 61.111 0.00 0.00 40.70 4.41
3109 5062 2.048222 TGCGTCTACTGCACAGCC 60.048 61.111 0.00 0.00 37.44 4.85
3110 5063 3.181967 GCGTCTACTGCACAGCCG 61.182 66.667 0.00 0.00 0.00 5.52
3111 5064 2.507102 CGTCTACTGCACAGCCGG 60.507 66.667 0.00 0.00 0.00 6.13
3112 5065 2.815647 GTCTACTGCACAGCCGGC 60.816 66.667 21.89 21.89 0.00 6.13
3113 5066 4.082523 TCTACTGCACAGCCGGCC 62.083 66.667 26.15 8.39 0.00 6.13
3137 5090 2.592308 GGGACCTCCAGCACCATC 59.408 66.667 0.00 0.00 37.91 3.51
3138 5091 2.592308 GGACCTCCAGCACCATCC 59.408 66.667 0.00 0.00 35.64 3.51
3139 5092 2.592308 GACCTCCAGCACCATCCC 59.408 66.667 0.00 0.00 0.00 3.85
3140 5093 3.391665 GACCTCCAGCACCATCCCG 62.392 68.421 0.00 0.00 0.00 5.14
3141 5094 4.181010 CCTCCAGCACCATCCCGG 62.181 72.222 0.00 0.00 42.50 5.73
3142 5095 4.864334 CTCCAGCACCATCCCGGC 62.864 72.222 0.00 0.00 39.03 6.13
3144 5097 4.864334 CCAGCACCATCCCGGCTC 62.864 72.222 0.00 0.00 39.03 4.70
3145 5098 3.790437 CAGCACCATCCCGGCTCT 61.790 66.667 0.00 0.00 39.03 4.09
3146 5099 3.474570 AGCACCATCCCGGCTCTC 61.475 66.667 0.00 0.00 39.03 3.20
3147 5100 4.554036 GCACCATCCCGGCTCTCC 62.554 72.222 0.00 0.00 39.03 3.71
3148 5101 3.866582 CACCATCCCGGCTCTCCC 61.867 72.222 0.00 0.00 39.03 4.30
3159 5112 3.450115 CTCTCCCCCGACGACCAC 61.450 72.222 0.00 0.00 0.00 4.16
3160 5113 4.289101 TCTCCCCCGACGACCACA 62.289 66.667 0.00 0.00 0.00 4.17
3161 5114 3.075005 CTCCCCCGACGACCACAT 61.075 66.667 0.00 0.00 0.00 3.21
3162 5115 3.072468 TCCCCCGACGACCACATC 61.072 66.667 0.00 0.00 0.00 3.06
3163 5116 3.387091 CCCCCGACGACCACATCA 61.387 66.667 0.00 0.00 0.00 3.07
3164 5117 2.125673 CCCCGACGACCACATCAC 60.126 66.667 0.00 0.00 0.00 3.06
3165 5118 2.654289 CCCGACGACCACATCACA 59.346 61.111 0.00 0.00 0.00 3.58
3166 5119 1.218047 CCCGACGACCACATCACAT 59.782 57.895 0.00 0.00 0.00 3.21
3167 5120 0.806102 CCCGACGACCACATCACATC 60.806 60.000 0.00 0.00 0.00 3.06
3168 5121 0.108851 CCGACGACCACATCACATCA 60.109 55.000 0.00 0.00 0.00 3.07
3169 5122 1.271876 CGACGACCACATCACATCAG 58.728 55.000 0.00 0.00 0.00 2.90
3170 5123 1.645034 GACGACCACATCACATCAGG 58.355 55.000 0.00 0.00 0.00 3.86
3171 5124 0.250234 ACGACCACATCACATCAGGG 59.750 55.000 0.00 0.00 0.00 4.45
3172 5125 0.250234 CGACCACATCACATCAGGGT 59.750 55.000 0.00 0.00 0.00 4.34
3173 5126 1.742761 GACCACATCACATCAGGGTG 58.257 55.000 0.00 0.00 40.16 4.61
3174 5127 0.322816 ACCACATCACATCAGGGTGC 60.323 55.000 0.00 0.00 38.66 5.01
3175 5128 1.371337 CCACATCACATCAGGGTGCG 61.371 60.000 0.00 0.00 38.66 5.34
3176 5129 0.391528 CACATCACATCAGGGTGCGA 60.392 55.000 0.00 0.00 38.66 5.10
3177 5130 0.107993 ACATCACATCAGGGTGCGAG 60.108 55.000 0.00 0.00 38.66 5.03
3178 5131 1.153289 ATCACATCAGGGTGCGAGC 60.153 57.895 0.00 0.00 38.66 5.03
3179 5132 1.620739 ATCACATCAGGGTGCGAGCT 61.621 55.000 0.00 0.00 38.66 4.09
3180 5133 1.812922 CACATCAGGGTGCGAGCTC 60.813 63.158 2.73 2.73 31.10 4.09
3181 5134 1.986757 ACATCAGGGTGCGAGCTCT 60.987 57.895 12.85 0.00 0.00 4.09
3182 5135 1.227205 CATCAGGGTGCGAGCTCTC 60.227 63.158 12.85 4.04 0.00 3.20
3183 5136 1.381056 ATCAGGGTGCGAGCTCTCT 60.381 57.895 12.85 0.00 0.00 3.10
3184 5137 1.391157 ATCAGGGTGCGAGCTCTCTC 61.391 60.000 12.85 4.55 35.99 3.20
3185 5138 2.051518 CAGGGTGCGAGCTCTCTCT 61.052 63.158 12.85 4.63 37.19 3.10
3186 5139 1.752694 AGGGTGCGAGCTCTCTCTC 60.753 63.158 12.85 4.69 37.19 3.20
3207 5160 1.363807 AAAAAGTTGCAGCTCCCGC 59.636 52.632 2.60 0.00 0.00 6.13
3208 5161 2.406452 AAAAAGTTGCAGCTCCCGCG 62.406 55.000 2.60 0.00 42.32 6.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.857038 GGGCGCGGTGGATCCTAA 61.857 66.667 14.23 0.00 0.00 2.69
42 43 1.837051 TCGCAGGTCCACCTTGTCT 60.837 57.895 0.00 0.00 46.09 3.41
50 51 2.601666 AGCTCTGTCGCAGGTCCA 60.602 61.111 6.95 0.00 31.51 4.02
60 61 3.768922 GCCTCTCGCCAGCTCTGT 61.769 66.667 0.00 0.00 0.00 3.41
62 63 3.459965 CTGCCTCTCGCCAGCTCT 61.460 66.667 0.00 0.00 36.24 4.09
108 110 2.045926 GATTCCACGCAGCCACCT 60.046 61.111 0.00 0.00 0.00 4.00
109 111 1.244019 AAAGATTCCACGCAGCCACC 61.244 55.000 0.00 0.00 0.00 4.61
111 113 1.865788 GCAAAGATTCCACGCAGCCA 61.866 55.000 0.00 0.00 0.00 4.75
112 114 1.153958 GCAAAGATTCCACGCAGCC 60.154 57.895 0.00 0.00 0.00 4.85
115 117 1.298157 CCGAGCAAAGATTCCACGCA 61.298 55.000 0.00 0.00 0.00 5.24
116 118 1.019278 TCCGAGCAAAGATTCCACGC 61.019 55.000 0.00 0.00 0.00 5.34
117 119 1.594862 GATCCGAGCAAAGATTCCACG 59.405 52.381 0.00 0.00 0.00 4.94
120 122 2.216898 CCAGATCCGAGCAAAGATTCC 58.783 52.381 0.00 0.00 0.00 3.01
121 123 2.911484 ACCAGATCCGAGCAAAGATTC 58.089 47.619 0.00 0.00 0.00 2.52
122 124 3.012518 CAACCAGATCCGAGCAAAGATT 58.987 45.455 0.00 0.00 0.00 2.40
123 125 2.026822 ACAACCAGATCCGAGCAAAGAT 60.027 45.455 0.00 0.00 0.00 2.40
124 126 1.347707 ACAACCAGATCCGAGCAAAGA 59.652 47.619 0.00 0.00 0.00 2.52
152 154 1.342555 CCGAAGACGCACGAACATAA 58.657 50.000 0.00 0.00 38.29 1.90
161 163 3.060020 GATCCGACCCGAAGACGCA 62.060 63.158 0.00 0.00 38.29 5.24
163 165 1.664321 AAGGATCCGACCCGAAGACG 61.664 60.000 5.98 0.00 39.43 4.18
167 169 0.966875 TCGAAAGGATCCGACCCGAA 60.967 55.000 15.52 4.13 0.00 4.30
170 172 3.590127 GATCGAAAGGATCCGACCC 57.410 57.895 5.98 0.00 44.86 4.46
183 185 5.686834 CCGATGAAGAATAACGTAGATCGA 58.313 41.667 0.00 0.00 42.86 3.59
224 226 0.880718 GCCCCATAGAACTAGCGCAC 60.881 60.000 11.47 0.00 0.00 5.34
225 227 1.445942 GCCCCATAGAACTAGCGCA 59.554 57.895 11.47 0.00 0.00 6.09
243 245 1.439679 GGGAAGTTGTCGTGCTAAGG 58.560 55.000 0.00 0.00 0.00 2.69
254 256 3.504906 TGTAGTAGACAGTCGGGAAGTTG 59.495 47.826 0.00 0.00 32.86 3.16
255 257 3.759581 TGTAGTAGACAGTCGGGAAGTT 58.240 45.455 0.00 0.00 32.86 2.66
260 262 3.255149 ACTTGTTGTAGTAGACAGTCGGG 59.745 47.826 0.00 0.00 39.88 5.14
262 264 5.173312 CACAACTTGTTGTAGTAGACAGTCG 59.827 44.000 17.26 0.00 39.88 4.18
334 336 0.710567 CGACTACAAGCACTGAAGCG 59.289 55.000 0.00 0.00 40.15 4.68
350 352 1.723003 CGTAAACCACCTAGCAACGAC 59.277 52.381 0.00 0.00 0.00 4.34
395 398 4.073293 AGACAGTACAAAGAACACCAGG 57.927 45.455 0.00 0.00 0.00 4.45
396 399 5.116180 TCAAGACAGTACAAAGAACACCAG 58.884 41.667 0.00 0.00 0.00 4.00
405 408 8.675705 TTCATCTTCAATCAAGACAGTACAAA 57.324 30.769 0.00 0.00 44.28 2.83
414 417 9.822185 TTTCGATCTATTCATCTTCAATCAAGA 57.178 29.630 0.00 0.00 45.60 3.02
416 419 9.605275 ACTTTCGATCTATTCATCTTCAATCAA 57.395 29.630 0.00 0.00 0.00 2.57
432 435 5.613358 AATTGCGAGAAAACTTTCGATCT 57.387 34.783 0.00 0.00 41.92 2.75
477 491 4.635765 TGAATTGATGTGCTAGTTACTGCC 59.364 41.667 0.00 0.00 0.00 4.85
478 492 5.728898 GCTGAATTGATGTGCTAGTTACTGC 60.729 44.000 0.00 0.00 0.00 4.40
479 493 5.583854 AGCTGAATTGATGTGCTAGTTACTG 59.416 40.000 0.00 0.00 31.71 2.74
480 494 5.583854 CAGCTGAATTGATGTGCTAGTTACT 59.416 40.000 8.42 0.00 32.29 2.24
557 578 7.201609 CCACATGGTTACACACATTGTATAGAC 60.202 40.741 0.00 0.00 40.53 2.59
674 2615 8.162878 TGATATACTACTAGTACACACCAAGC 57.837 38.462 0.00 0.00 32.84 4.01
704 2645 0.321298 GCCGAGGAGTGCTTAAACCA 60.321 55.000 0.00 0.00 0.00 3.67
714 2655 1.705997 AAAACCAGTGGCCGAGGAGT 61.706 55.000 9.78 0.00 0.00 3.85
715 2656 0.537371 AAAAACCAGTGGCCGAGGAG 60.537 55.000 9.78 0.00 0.00 3.69
716 2657 0.536460 GAAAAACCAGTGGCCGAGGA 60.536 55.000 9.78 0.00 0.00 3.71
717 2658 1.852067 CGAAAAACCAGTGGCCGAGG 61.852 60.000 9.78 1.65 0.00 4.63
718 2659 0.882927 TCGAAAAACCAGTGGCCGAG 60.883 55.000 9.78 0.00 0.00 4.63
811 2752 3.569690 GCGGCCCGGTTAACATCG 61.570 66.667 4.77 2.57 0.00 3.84
843 2784 1.064758 TGGGTGGTGATAAGATGGTGC 60.065 52.381 0.00 0.00 0.00 5.01
907 2848 1.079057 GTGGAGGGAAGGCGAGTTC 60.079 63.158 0.00 0.00 0.00 3.01
962 2903 0.464735 GAGCTAGGCGAGGTGAGAGA 60.465 60.000 3.47 0.00 35.50 3.10
963 2904 1.452145 GGAGCTAGGCGAGGTGAGAG 61.452 65.000 3.47 0.00 35.50 3.20
1074 3015 2.789203 GACGGCGCTGATGTCGAAC 61.789 63.158 25.98 5.55 0.00 3.95
1194 3135 0.032217 CCTGCTCTTCCTCCTCCTCT 60.032 60.000 0.00 0.00 0.00 3.69
1195 3136 0.032615 TCCTGCTCTTCCTCCTCCTC 60.033 60.000 0.00 0.00 0.00 3.71
1196 3137 0.325203 GTCCTGCTCTTCCTCCTCCT 60.325 60.000 0.00 0.00 0.00 3.69
1484 3431 0.320771 GTCCTTCTTGGCAGCTTCGA 60.321 55.000 0.00 0.00 35.26 3.71
1485 3432 1.301677 GGTCCTTCTTGGCAGCTTCG 61.302 60.000 0.00 0.00 35.26 3.79
1488 3435 2.759795 GGGTCCTTCTTGGCAGCT 59.240 61.111 0.00 0.00 35.26 4.24
1529 3476 1.827344 TGTCAGAATCCTCAGCGACAT 59.173 47.619 0.00 0.00 0.00 3.06
1532 3479 0.171231 CGTGTCAGAATCCTCAGCGA 59.829 55.000 0.00 0.00 0.00 4.93
1536 3483 3.615110 GCTTCTTCGTGTCAGAATCCTCA 60.615 47.826 0.00 0.00 29.78 3.86
1537 3484 2.926838 GCTTCTTCGTGTCAGAATCCTC 59.073 50.000 0.00 0.00 29.78 3.71
1538 3485 2.354203 GGCTTCTTCGTGTCAGAATCCT 60.354 50.000 0.00 0.00 34.82 3.24
1945 3892 2.505982 CAGGTACCGCCCCATCAG 59.494 66.667 6.18 0.00 38.26 2.90
1998 3945 2.688666 ATCTCCGCCAGCTTCCCA 60.689 61.111 0.00 0.00 0.00 4.37
2124 4071 2.978010 CCGACCACCACCTTGCAC 60.978 66.667 0.00 0.00 0.00 4.57
2174 4121 2.251642 AAGCCGTTCTCGTTGCACC 61.252 57.895 0.00 0.00 35.01 5.01
2218 4165 1.740025 GGATGAAAGTTTGGAGCTCCG 59.260 52.381 27.43 0.00 39.43 4.63
2323 4270 8.752187 TCTTAAACTGTACTTACCGTATTCCAT 58.248 33.333 0.00 0.00 0.00 3.41
2324 4271 8.121305 TCTTAAACTGTACTTACCGTATTCCA 57.879 34.615 0.00 0.00 0.00 3.53
2325 4272 8.986477 TTCTTAAACTGTACTTACCGTATTCC 57.014 34.615 0.00 0.00 0.00 3.01
2326 4273 9.846248 TCTTCTTAAACTGTACTTACCGTATTC 57.154 33.333 0.00 0.00 0.00 1.75
2328 4275 9.631452 GTTCTTCTTAAACTGTACTTACCGTAT 57.369 33.333 0.00 0.00 0.00 3.06
2329 4276 8.629158 TGTTCTTCTTAAACTGTACTTACCGTA 58.371 33.333 0.00 0.00 0.00 4.02
2330 4277 7.491682 TGTTCTTCTTAAACTGTACTTACCGT 58.508 34.615 0.00 0.00 0.00 4.83
2331 4278 7.115947 CCTGTTCTTCTTAAACTGTACTTACCG 59.884 40.741 0.00 0.00 0.00 4.02
2332 4279 7.387122 CCCTGTTCTTCTTAAACTGTACTTACC 59.613 40.741 0.00 0.00 0.00 2.85
2334 4281 8.026396 ACCCTGTTCTTCTTAAACTGTACTTA 57.974 34.615 0.00 0.00 0.00 2.24
2397 4347 1.142474 GATTGCCAAAGCTGCACAAC 58.858 50.000 1.02 0.00 38.72 3.32
2490 4443 6.823182 CACCATCATTGACAAGGATAACTACA 59.177 38.462 14.52 0.00 29.60 2.74
2510 4463 4.471386 ACAAATCTCTACTGCTACCACCAT 59.529 41.667 0.00 0.00 0.00 3.55
2520 4473 5.695851 AGCAAACCAACAAATCTCTACTG 57.304 39.130 0.00 0.00 0.00 2.74
2531 4484 1.202806 AGCAGCTCTAGCAAACCAACA 60.203 47.619 4.54 0.00 45.16 3.33
2532 4485 1.198637 CAGCAGCTCTAGCAAACCAAC 59.801 52.381 4.54 0.00 45.16 3.77
2533 4486 1.527034 CAGCAGCTCTAGCAAACCAA 58.473 50.000 4.54 0.00 45.16 3.67
2576 4529 2.044252 TCGCGGCTTCTACTCCCT 60.044 61.111 6.13 0.00 0.00 4.20
2598 4551 2.970974 GCCGAGCTGGTTCACAAGC 61.971 63.158 0.00 0.00 41.21 4.01
2617 4570 3.011635 ATCTCCGCGAGCTGTGCTT 62.012 57.895 8.23 0.00 39.88 3.91
2618 4571 3.456365 ATCTCCGCGAGCTGTGCT 61.456 61.111 8.23 0.00 43.88 4.40
2619 4572 2.967929 ATCATCTCCGCGAGCTGTGC 62.968 60.000 8.23 0.00 29.28 4.57
2620 4573 1.067084 ATCATCTCCGCGAGCTGTG 59.933 57.895 8.23 0.00 29.28 3.66
2621 4574 1.067084 CATCATCTCCGCGAGCTGT 59.933 57.895 8.23 0.00 29.28 4.40
2622 4575 0.249197 TTCATCATCTCCGCGAGCTG 60.249 55.000 8.23 5.36 0.00 4.24
2623 4576 0.031857 CTTCATCATCTCCGCGAGCT 59.968 55.000 8.23 0.00 0.00 4.09
2624 4577 0.249238 ACTTCATCATCTCCGCGAGC 60.249 55.000 8.23 0.00 0.00 5.03
2625 4578 1.202348 ACACTTCATCATCTCCGCGAG 60.202 52.381 8.23 3.02 0.00 5.03
2626 4579 0.817654 ACACTTCATCATCTCCGCGA 59.182 50.000 8.23 0.00 0.00 5.87
2627 4580 1.203928 GACACTTCATCATCTCCGCG 58.796 55.000 0.00 0.00 0.00 6.46
2628 4581 2.299993 TGACACTTCATCATCTCCGC 57.700 50.000 0.00 0.00 0.00 5.54
2629 4582 3.790091 ACATGACACTTCATCATCTCCG 58.210 45.455 0.00 0.00 40.79 4.63
2630 4583 3.801050 CGACATGACACTTCATCATCTCC 59.199 47.826 0.00 0.00 40.79 3.71
2631 4584 4.267214 CACGACATGACACTTCATCATCTC 59.733 45.833 0.00 0.00 40.79 2.75
2632 4585 4.082026 TCACGACATGACACTTCATCATCT 60.082 41.667 0.00 0.00 40.79 2.90
2633 4586 4.176271 TCACGACATGACACTTCATCATC 58.824 43.478 0.00 0.00 40.79 2.92
2634 4587 4.192429 TCACGACATGACACTTCATCAT 57.808 40.909 0.00 0.00 40.79 2.45
2635 4588 3.658757 TCACGACATGACACTTCATCA 57.341 42.857 0.00 0.00 40.79 3.07
2636 4589 4.627035 TGAATCACGACATGACACTTCATC 59.373 41.667 0.00 0.00 40.79 2.92
2637 4590 4.568956 TGAATCACGACATGACACTTCAT 58.431 39.130 0.00 0.00 43.80 2.57
2638 4591 3.988819 TGAATCACGACATGACACTTCA 58.011 40.909 0.00 0.00 41.24 3.02
2639 4592 4.990543 TTGAATCACGACATGACACTTC 57.009 40.909 0.00 0.00 41.24 3.01
2640 4593 5.947228 ATTTGAATCACGACATGACACTT 57.053 34.783 0.00 0.00 41.24 3.16
2641 4594 5.469760 TGAATTTGAATCACGACATGACACT 59.530 36.000 0.00 0.00 41.24 3.55
2642 4595 5.688823 TGAATTTGAATCACGACATGACAC 58.311 37.500 0.00 0.00 41.24 3.67
2643 4596 5.469760 ACTGAATTTGAATCACGACATGACA 59.530 36.000 0.00 0.00 41.24 3.58
2644 4597 5.931532 ACTGAATTTGAATCACGACATGAC 58.068 37.500 0.00 0.00 41.24 3.06
2645 4598 7.848223 ATACTGAATTTGAATCACGACATGA 57.152 32.000 0.00 0.00 43.13 3.07
2646 4599 9.986833 TTTATACTGAATTTGAATCACGACATG 57.013 29.630 0.00 0.00 0.00 3.21
2648 4601 9.430623 TCTTTATACTGAATTTGAATCACGACA 57.569 29.630 0.00 0.00 0.00 4.35
2669 4622 9.823647 CTTCATCAGAAGTTAGCCTTATCTTTA 57.176 33.333 0.00 0.00 44.97 1.85
2670 4623 8.729805 CTTCATCAGAAGTTAGCCTTATCTTT 57.270 34.615 0.00 0.00 44.97 2.52
2685 4638 0.173481 CGGGTCTCGCTTCATCAGAA 59.827 55.000 0.00 0.00 0.00 3.02
2686 4639 0.965866 ACGGGTCTCGCTTCATCAGA 60.966 55.000 0.00 0.00 43.89 3.27
2687 4640 0.526524 GACGGGTCTCGCTTCATCAG 60.527 60.000 0.00 0.00 43.89 2.90
2688 4641 1.511305 GACGGGTCTCGCTTCATCA 59.489 57.895 0.00 0.00 43.89 3.07
2689 4642 1.586564 CGACGGGTCTCGCTTCATC 60.587 63.158 0.00 0.00 43.89 2.92
2690 4643 2.267681 GACGACGGGTCTCGCTTCAT 62.268 60.000 0.00 0.00 42.62 2.57
2691 4644 2.974489 GACGACGGGTCTCGCTTCA 61.974 63.158 0.00 0.00 42.62 3.02
2692 4645 2.202453 GACGACGGGTCTCGCTTC 60.202 66.667 0.00 0.00 42.62 3.86
2693 4646 4.099170 CGACGACGGGTCTCGCTT 62.099 66.667 0.00 0.00 43.79 4.68
2735 4688 3.060615 GCAACCTCAGCTGCCCAG 61.061 66.667 9.47 0.70 32.18 4.45
2736 4689 3.573229 AGCAACCTCAGCTGCCCA 61.573 61.111 9.47 0.00 41.61 5.36
2741 4694 2.033757 CTGGCAGCAACCTCAGCT 59.966 61.111 0.00 0.00 44.62 4.24
2742 4695 3.745803 GCTGGCAGCAACCTCAGC 61.746 66.667 33.33 4.00 44.34 4.26
2743 4696 3.060615 GGCTGGCAGCAACCTCAG 61.061 66.667 37.49 0.50 44.75 3.35
2744 4697 4.666253 GGGCTGGCAGCAACCTCA 62.666 66.667 37.49 0.00 44.75 3.86
2745 4698 3.951769 ATGGGCTGGCAGCAACCTC 62.952 63.158 37.49 21.25 44.75 3.85
2746 4699 3.951769 GATGGGCTGGCAGCAACCT 62.952 63.158 37.49 23.22 44.75 3.50
2747 4700 3.455469 GATGGGCTGGCAGCAACC 61.455 66.667 37.49 29.89 44.75 3.77
2748 4701 3.455469 GGATGGGCTGGCAGCAAC 61.455 66.667 37.49 29.14 44.75 4.17
2751 4704 4.802051 TTCGGATGGGCTGGCAGC 62.802 66.667 30.93 30.93 41.46 5.25
2752 4705 1.450531 GAATTCGGATGGGCTGGCAG 61.451 60.000 10.94 10.94 0.00 4.85
2753 4706 1.453745 GAATTCGGATGGGCTGGCA 60.454 57.895 2.88 0.00 0.00 4.92
2754 4707 2.546494 CGAATTCGGATGGGCTGGC 61.546 63.158 20.16 0.00 35.37 4.85
2755 4708 0.882042 CTCGAATTCGGATGGGCTGG 60.882 60.000 26.47 3.81 40.29 4.85
2756 4709 0.179073 ACTCGAATTCGGATGGGCTG 60.179 55.000 26.47 9.81 40.29 4.85
2757 4710 0.541863 AACTCGAATTCGGATGGGCT 59.458 50.000 26.47 3.26 40.29 5.19
2758 4711 1.330829 GAAACTCGAATTCGGATGGGC 59.669 52.381 26.47 9.40 40.29 5.36
2759 4712 1.593006 CGAAACTCGAATTCGGATGGG 59.407 52.381 26.47 13.99 43.74 4.00
2760 4713 2.998668 CGAAACTCGAATTCGGATGG 57.001 50.000 26.47 16.15 43.74 3.51
2765 4718 0.246757 CGTGCCGAAACTCGAATTCG 60.247 55.000 21.78 21.78 43.74 3.34
2766 4719 0.094730 CCGTGCCGAAACTCGAATTC 59.905 55.000 0.00 0.00 43.74 2.17
2767 4720 0.320073 TCCGTGCCGAAACTCGAATT 60.320 50.000 0.00 0.00 43.74 2.17
2768 4721 1.012486 GTCCGTGCCGAAACTCGAAT 61.012 55.000 0.00 0.00 43.74 3.34
2769 4722 1.662446 GTCCGTGCCGAAACTCGAA 60.662 57.895 0.00 0.00 43.74 3.71
2770 4723 2.049802 GTCCGTGCCGAAACTCGA 60.050 61.111 0.00 0.00 43.74 4.04
2771 4724 3.467119 CGTCCGTGCCGAAACTCG 61.467 66.667 0.00 0.00 40.07 4.18
2772 4725 3.774702 GCGTCCGTGCCGAAACTC 61.775 66.667 0.00 0.00 0.00 3.01
2793 4746 2.206576 AGGAGAAACTTCATGGGCAC 57.793 50.000 0.00 0.00 0.00 5.01
2794 4747 5.708736 TTATAGGAGAAACTTCATGGGCA 57.291 39.130 0.00 0.00 0.00 5.36
2795 4748 6.357367 TCTTTATAGGAGAAACTTCATGGGC 58.643 40.000 0.00 0.00 0.00 5.36
2796 4749 8.807948 TTTCTTTATAGGAGAAACTTCATGGG 57.192 34.615 8.49 0.00 38.00 4.00
2808 4761 9.907229 ACCCTTATTGACTTTTCTTTATAGGAG 57.093 33.333 0.00 0.00 0.00 3.69
2813 4766 8.967918 GCCTAACCCTTATTGACTTTTCTTTAT 58.032 33.333 0.00 0.00 0.00 1.40
2814 4767 7.395206 GGCCTAACCCTTATTGACTTTTCTTTA 59.605 37.037 0.00 0.00 0.00 1.85
2815 4768 6.210784 GGCCTAACCCTTATTGACTTTTCTTT 59.789 38.462 0.00 0.00 0.00 2.52
2816 4769 5.715279 GGCCTAACCCTTATTGACTTTTCTT 59.285 40.000 0.00 0.00 0.00 2.52
2817 4770 5.015284 AGGCCTAACCCTTATTGACTTTTCT 59.985 40.000 1.29 0.00 40.58 2.52
2818 4771 5.262009 AGGCCTAACCCTTATTGACTTTTC 58.738 41.667 1.29 0.00 40.58 2.29
2819 4772 5.270979 AGGCCTAACCCTTATTGACTTTT 57.729 39.130 1.29 0.00 40.58 2.27
2820 4773 4.948062 AGGCCTAACCCTTATTGACTTT 57.052 40.909 1.29 0.00 40.58 2.66
2821 4774 4.569865 CCAAGGCCTAACCCTTATTGACTT 60.570 45.833 5.16 0.00 43.23 3.01
2822 4775 3.053619 CCAAGGCCTAACCCTTATTGACT 60.054 47.826 5.16 0.00 43.23 3.41
2823 4776 3.288092 CCAAGGCCTAACCCTTATTGAC 58.712 50.000 5.16 0.00 43.23 3.18
2824 4777 2.243736 CCCAAGGCCTAACCCTTATTGA 59.756 50.000 5.16 0.00 43.23 2.57
2825 4778 2.024369 ACCCAAGGCCTAACCCTTATTG 60.024 50.000 5.16 0.00 43.23 1.90
2826 4779 2.294194 ACCCAAGGCCTAACCCTTATT 58.706 47.619 5.16 0.00 43.23 1.40
2827 4780 1.995868 ACCCAAGGCCTAACCCTTAT 58.004 50.000 5.16 0.00 43.23 1.73
2828 4781 1.356398 CAACCCAAGGCCTAACCCTTA 59.644 52.381 5.16 0.00 43.23 2.69
2829 4782 0.114364 CAACCCAAGGCCTAACCCTT 59.886 55.000 5.16 0.00 45.94 3.95
2830 4783 0.774491 TCAACCCAAGGCCTAACCCT 60.774 55.000 5.16 0.00 40.58 4.34
2831 4784 0.335019 ATCAACCCAAGGCCTAACCC 59.665 55.000 5.16 0.00 40.58 4.11
2832 4785 1.285078 AGATCAACCCAAGGCCTAACC 59.715 52.381 5.16 0.00 39.61 2.85
2833 4786 2.026262 TGAGATCAACCCAAGGCCTAAC 60.026 50.000 5.16 0.00 0.00 2.34
2834 4787 2.274542 TGAGATCAACCCAAGGCCTAA 58.725 47.619 5.16 0.00 0.00 2.69
2835 4788 1.965414 TGAGATCAACCCAAGGCCTA 58.035 50.000 5.16 0.00 0.00 3.93
2836 4789 1.302907 ATGAGATCAACCCAAGGCCT 58.697 50.000 0.00 0.00 0.00 5.19
2837 4790 2.149973 AATGAGATCAACCCAAGGCC 57.850 50.000 0.00 0.00 0.00 5.19
2838 4791 4.541973 AAAAATGAGATCAACCCAAGGC 57.458 40.909 0.00 0.00 0.00 4.35
2868 4821 1.055338 GTCAAAACCTACCGACGACG 58.945 55.000 0.00 0.00 39.43 5.12
2869 4822 1.422388 GGTCAAAACCTACCGACGAC 58.578 55.000 0.00 0.00 42.80 4.34
2870 4823 3.892200 GGTCAAAACCTACCGACGA 57.108 52.632 0.00 0.00 42.80 4.20
2875 4828 0.794473 CGCTTCGGTCAAAACCTACC 59.206 55.000 0.00 0.00 44.04 3.18
2876 4829 0.794473 CCGCTTCGGTCAAAACCTAC 59.206 55.000 0.00 0.00 44.04 3.18
2877 4830 3.220447 CCGCTTCGGTCAAAACCTA 57.780 52.632 0.00 0.00 44.04 3.08
2878 4831 4.058797 CCGCTTCGGTCAAAACCT 57.941 55.556 0.00 0.00 44.04 3.50
2889 4842 2.793322 CTTCGCTTCGCTCCGCTTC 61.793 63.158 0.00 0.00 0.00 3.86
2890 4843 2.811317 CTTCGCTTCGCTCCGCTT 60.811 61.111 0.00 0.00 0.00 4.68
2891 4844 2.209064 TAACTTCGCTTCGCTCCGCT 62.209 55.000 0.00 0.00 0.00 5.52
2892 4845 1.743855 CTAACTTCGCTTCGCTCCGC 61.744 60.000 0.00 0.00 0.00 5.54
2893 4846 1.140407 CCTAACTTCGCTTCGCTCCG 61.140 60.000 0.00 0.00 0.00 4.63
2894 4847 0.172803 TCCTAACTTCGCTTCGCTCC 59.827 55.000 0.00 0.00 0.00 4.70
2895 4848 2.211353 ATCCTAACTTCGCTTCGCTC 57.789 50.000 0.00 0.00 0.00 5.03
2896 4849 3.553096 CCATATCCTAACTTCGCTTCGCT 60.553 47.826 0.00 0.00 0.00 4.93
2897 4850 2.731976 CCATATCCTAACTTCGCTTCGC 59.268 50.000 0.00 0.00 0.00 4.70
2898 4851 3.318017 CCCATATCCTAACTTCGCTTCG 58.682 50.000 0.00 0.00 0.00 3.79
2899 4852 3.067833 GCCCATATCCTAACTTCGCTTC 58.932 50.000 0.00 0.00 0.00 3.86
2900 4853 2.224548 GGCCCATATCCTAACTTCGCTT 60.225 50.000 0.00 0.00 0.00 4.68
2901 4854 1.348036 GGCCCATATCCTAACTTCGCT 59.652 52.381 0.00 0.00 0.00 4.93
2902 4855 1.610886 GGGCCCATATCCTAACTTCGC 60.611 57.143 19.95 0.00 0.00 4.70
2903 4856 1.978580 AGGGCCCATATCCTAACTTCG 59.021 52.381 27.56 0.00 0.00 3.79
2904 4857 3.756117 CAAGGGCCCATATCCTAACTTC 58.244 50.000 27.56 0.00 32.21 3.01
2905 4858 2.158460 GCAAGGGCCCATATCCTAACTT 60.158 50.000 27.56 1.34 32.21 2.66
2906 4859 1.425448 GCAAGGGCCCATATCCTAACT 59.575 52.381 27.56 0.00 32.21 2.24
2907 4860 1.144913 TGCAAGGGCCCATATCCTAAC 59.855 52.381 27.56 2.75 40.13 2.34
2908 4861 1.528600 TGCAAGGGCCCATATCCTAA 58.471 50.000 27.56 0.00 40.13 2.69
2909 4862 1.528600 TTGCAAGGGCCCATATCCTA 58.471 50.000 27.56 0.00 40.13 2.94
2910 4863 0.636101 TTTGCAAGGGCCCATATCCT 59.364 50.000 27.56 0.00 40.13 3.24
2911 4864 1.494960 TTTTGCAAGGGCCCATATCC 58.505 50.000 27.56 7.81 40.13 2.59
2912 4865 2.158914 CCTTTTTGCAAGGGCCCATATC 60.159 50.000 27.56 10.57 40.13 1.63
2913 4866 1.839354 CCTTTTTGCAAGGGCCCATAT 59.161 47.619 27.56 6.76 40.13 1.78
2914 4867 1.203237 TCCTTTTTGCAAGGGCCCATA 60.203 47.619 27.56 3.49 40.13 2.74
2915 4868 0.473501 TCCTTTTTGCAAGGGCCCAT 60.474 50.000 27.56 10.06 40.13 4.00
2916 4869 0.692419 TTCCTTTTTGCAAGGGCCCA 60.692 50.000 27.56 0.00 40.13 5.36
2917 4870 0.472044 TTTCCTTTTTGCAAGGGCCC 59.528 50.000 16.46 16.46 40.13 5.80
2918 4871 2.340210 TTTTCCTTTTTGCAAGGGCC 57.660 45.000 0.00 0.00 40.13 5.80
2919 4872 3.213506 ACATTTTCCTTTTTGCAAGGGC 58.786 40.909 0.00 0.00 37.99 5.19
2920 4873 5.450274 CCAAACATTTTCCTTTTTGCAAGGG 60.450 40.000 0.00 4.07 37.99 3.95
2921 4874 5.450274 CCCAAACATTTTCCTTTTTGCAAGG 60.450 40.000 0.00 0.00 38.78 3.61
2922 4875 5.125257 ACCCAAACATTTTCCTTTTTGCAAG 59.875 36.000 0.00 0.00 0.00 4.01
2923 4876 5.012893 ACCCAAACATTTTCCTTTTTGCAA 58.987 33.333 0.00 0.00 0.00 4.08
2924 4877 4.593956 ACCCAAACATTTTCCTTTTTGCA 58.406 34.783 0.00 0.00 0.00 4.08
2925 4878 5.277106 CGTACCCAAACATTTTCCTTTTTGC 60.277 40.000 0.00 0.00 0.00 3.68
2926 4879 5.235401 CCGTACCCAAACATTTTCCTTTTTG 59.765 40.000 0.00 0.00 0.00 2.44
2927 4880 5.361427 CCGTACCCAAACATTTTCCTTTTT 58.639 37.500 0.00 0.00 0.00 1.94
2928 4881 4.741235 GCCGTACCCAAACATTTTCCTTTT 60.741 41.667 0.00 0.00 0.00 2.27
2929 4882 3.243941 GCCGTACCCAAACATTTTCCTTT 60.244 43.478 0.00 0.00 0.00 3.11
2930 4883 2.297880 GCCGTACCCAAACATTTTCCTT 59.702 45.455 0.00 0.00 0.00 3.36
2931 4884 1.890489 GCCGTACCCAAACATTTTCCT 59.110 47.619 0.00 0.00 0.00 3.36
2932 4885 1.614413 TGCCGTACCCAAACATTTTCC 59.386 47.619 0.00 0.00 0.00 3.13
2933 4886 2.034812 TGTGCCGTACCCAAACATTTTC 59.965 45.455 0.00 0.00 0.00 2.29
2934 4887 2.032620 TGTGCCGTACCCAAACATTTT 58.967 42.857 0.00 0.00 0.00 1.82
2935 4888 1.338655 GTGTGCCGTACCCAAACATTT 59.661 47.619 0.00 0.00 0.00 2.32
2936 4889 0.955905 GTGTGCCGTACCCAAACATT 59.044 50.000 0.00 0.00 0.00 2.71
2937 4890 0.891904 GGTGTGCCGTACCCAAACAT 60.892 55.000 4.45 0.00 31.89 2.71
2938 4891 1.526455 GGTGTGCCGTACCCAAACA 60.526 57.895 4.45 0.00 31.89 2.83
2939 4892 3.347168 GGTGTGCCGTACCCAAAC 58.653 61.111 0.00 0.00 31.89 2.93
2949 4902 0.041576 GAAGTTTCGAACGGTGTGCC 60.042 55.000 0.00 0.00 36.23 5.01
2950 4903 3.432759 GAAGTTTCGAACGGTGTGC 57.567 52.632 0.00 0.00 36.23 4.57
2961 4914 2.092882 CGAGACCGGCCGAAGTTTC 61.093 63.158 30.73 19.90 0.00 2.78
2962 4915 2.048503 CGAGACCGGCCGAAGTTT 60.049 61.111 30.73 12.58 0.00 2.66
2963 4916 4.736896 GCGAGACCGGCCGAAGTT 62.737 66.667 30.73 9.15 36.06 2.66
2981 4934 0.249657 ATTTGGGATCGAGCGAGCTC 60.250 55.000 14.61 14.61 39.55 4.09
2982 4935 0.179000 AATTTGGGATCGAGCGAGCT 59.821 50.000 8.09 0.00 0.00 4.09
2983 4936 0.583917 GAATTTGGGATCGAGCGAGC 59.416 55.000 0.00 0.00 0.00 5.03
2984 4937 1.221414 GGAATTTGGGATCGAGCGAG 58.779 55.000 0.00 0.00 0.00 5.03
2985 4938 0.179056 GGGAATTTGGGATCGAGCGA 60.179 55.000 0.00 0.00 0.00 4.93
2986 4939 0.463654 TGGGAATTTGGGATCGAGCG 60.464 55.000 0.00 0.00 0.00 5.03
2987 4940 1.762708 TTGGGAATTTGGGATCGAGC 58.237 50.000 0.00 0.00 0.00 5.03
2988 4941 6.491403 AGATTAATTGGGAATTTGGGATCGAG 59.509 38.462 0.00 0.00 32.38 4.04
2989 4942 6.265196 CAGATTAATTGGGAATTTGGGATCGA 59.735 38.462 0.00 0.00 32.38 3.59
2990 4943 6.265196 TCAGATTAATTGGGAATTTGGGATCG 59.735 38.462 0.00 0.00 32.38 3.69
2991 4944 7.601705 TCAGATTAATTGGGAATTTGGGATC 57.398 36.000 0.00 0.00 32.38 3.36
2992 4945 8.014859 AGATCAGATTAATTGGGAATTTGGGAT 58.985 33.333 0.00 0.00 32.38 3.85
2993 4946 7.288389 CAGATCAGATTAATTGGGAATTTGGGA 59.712 37.037 0.00 0.00 32.38 4.37
2994 4947 7.439381 CAGATCAGATTAATTGGGAATTTGGG 58.561 38.462 0.00 0.00 32.38 4.12
2995 4948 7.439381 CCAGATCAGATTAATTGGGAATTTGG 58.561 38.462 0.00 0.00 32.38 3.28
2996 4949 6.927381 GCCAGATCAGATTAATTGGGAATTTG 59.073 38.462 0.00 0.00 32.38 2.32
2997 4950 6.239120 CGCCAGATCAGATTAATTGGGAATTT 60.239 38.462 0.00 0.00 32.38 1.82
2998 4951 5.242393 CGCCAGATCAGATTAATTGGGAATT 59.758 40.000 0.00 0.00 34.90 2.17
2999 4952 4.763793 CGCCAGATCAGATTAATTGGGAAT 59.236 41.667 0.00 0.00 0.00 3.01
3000 4953 4.136796 CGCCAGATCAGATTAATTGGGAA 58.863 43.478 0.00 0.00 0.00 3.97
3001 4954 3.496692 CCGCCAGATCAGATTAATTGGGA 60.497 47.826 0.00 0.00 0.00 4.37
3002 4955 2.816087 CCGCCAGATCAGATTAATTGGG 59.184 50.000 0.00 0.00 0.00 4.12
3003 4956 3.480470 ACCGCCAGATCAGATTAATTGG 58.520 45.455 0.00 0.00 0.00 3.16
3004 4957 4.384056 AGACCGCCAGATCAGATTAATTG 58.616 43.478 0.00 0.00 0.00 2.32
3005 4958 4.636249 GAGACCGCCAGATCAGATTAATT 58.364 43.478 0.00 0.00 0.00 1.40
3006 4959 3.305676 CGAGACCGCCAGATCAGATTAAT 60.306 47.826 0.00 0.00 0.00 1.40
3007 4960 2.034685 CGAGACCGCCAGATCAGATTAA 59.965 50.000 0.00 0.00 0.00 1.40
3008 4961 1.609072 CGAGACCGCCAGATCAGATTA 59.391 52.381 0.00 0.00 0.00 1.75
3009 4962 0.387202 CGAGACCGCCAGATCAGATT 59.613 55.000 0.00 0.00 0.00 2.40
3010 4963 0.753479 ACGAGACCGCCAGATCAGAT 60.753 55.000 0.00 0.00 39.95 2.90
3011 4964 0.965866 AACGAGACCGCCAGATCAGA 60.966 55.000 0.00 0.00 39.95 3.27
3012 4965 0.108615 AAACGAGACCGCCAGATCAG 60.109 55.000 0.00 0.00 39.95 2.90
3013 4966 0.320374 AAAACGAGACCGCCAGATCA 59.680 50.000 0.00 0.00 39.95 2.92
3014 4967 1.393883 GAAAAACGAGACCGCCAGATC 59.606 52.381 0.00 0.00 39.95 2.75
3015 4968 1.439679 GAAAAACGAGACCGCCAGAT 58.560 50.000 0.00 0.00 39.95 2.90
3016 4969 0.601841 GGAAAAACGAGACCGCCAGA 60.602 55.000 0.00 0.00 39.95 3.86
3017 4970 1.574702 GGGAAAAACGAGACCGCCAG 61.575 60.000 0.00 0.00 39.95 4.85
3018 4971 1.598685 GGGAAAAACGAGACCGCCA 60.599 57.895 0.00 0.00 39.95 5.69
3019 4972 2.674084 CGGGAAAAACGAGACCGCC 61.674 63.158 0.00 0.00 37.93 6.13
3020 4973 2.858158 CGGGAAAAACGAGACCGC 59.142 61.111 0.00 0.00 37.93 5.68
3021 4974 1.957186 TGCGGGAAAAACGAGACCG 60.957 57.895 0.00 0.00 46.78 4.79
3022 4975 1.161563 TGTGCGGGAAAAACGAGACC 61.162 55.000 0.00 0.00 0.00 3.85
3023 4976 0.041576 GTGTGCGGGAAAAACGAGAC 60.042 55.000 0.00 0.00 0.00 3.36
3024 4977 1.492319 CGTGTGCGGGAAAAACGAGA 61.492 55.000 0.00 0.00 36.38 4.04
3025 4978 1.083015 CGTGTGCGGGAAAAACGAG 60.083 57.895 0.00 0.00 36.38 4.18
3026 4979 3.015677 CGTGTGCGGGAAAAACGA 58.984 55.556 0.00 0.00 36.38 3.85
3027 4980 2.724358 GCGTGTGCGGGAAAAACG 60.724 61.111 0.00 0.00 38.78 3.60
3028 4981 2.354188 GGCGTGTGCGGGAAAAAC 60.354 61.111 0.00 0.00 44.10 2.43
3029 4982 3.597728 GGGCGTGTGCGGGAAAAA 61.598 61.111 0.00 0.00 44.10 1.94
3035 4988 4.483243 ATAAGGGGGCGTGTGCGG 62.483 66.667 0.00 0.00 44.10 5.69
3036 4989 2.895372 GATAAGGGGGCGTGTGCG 60.895 66.667 0.00 0.00 44.10 5.34
3037 4990 2.516225 GGATAAGGGGGCGTGTGC 60.516 66.667 0.00 0.00 41.71 4.57
3038 4991 1.146263 GAGGATAAGGGGGCGTGTG 59.854 63.158 0.00 0.00 0.00 3.82
3039 4992 1.003051 AGAGGATAAGGGGGCGTGT 59.997 57.895 0.00 0.00 0.00 4.49
3040 4993 0.760945 AGAGAGGATAAGGGGGCGTG 60.761 60.000 0.00 0.00 0.00 5.34
3041 4994 0.031010 AAGAGAGGATAAGGGGGCGT 60.031 55.000 0.00 0.00 0.00 5.68
3042 4995 0.682292 GAAGAGAGGATAAGGGGGCG 59.318 60.000 0.00 0.00 0.00 6.13
3043 4996 1.060729 GGAAGAGAGGATAAGGGGGC 58.939 60.000 0.00 0.00 0.00 5.80
3044 4997 1.343069 CGGAAGAGAGGATAAGGGGG 58.657 60.000 0.00 0.00 0.00 5.40
3045 4998 0.682292 GCGGAAGAGAGGATAAGGGG 59.318 60.000 0.00 0.00 0.00 4.79
3046 4999 0.682292 GGCGGAAGAGAGGATAAGGG 59.318 60.000 0.00 0.00 0.00 3.95
3047 5000 0.682292 GGGCGGAAGAGAGGATAAGG 59.318 60.000 0.00 0.00 0.00 2.69
3048 5001 0.682292 GGGGCGGAAGAGAGGATAAG 59.318 60.000 0.00 0.00 0.00 1.73
3049 5002 1.113517 CGGGGCGGAAGAGAGGATAA 61.114 60.000 0.00 0.00 0.00 1.75
3050 5003 1.530891 CGGGGCGGAAGAGAGGATA 60.531 63.158 0.00 0.00 0.00 2.59
3051 5004 2.840102 CGGGGCGGAAGAGAGGAT 60.840 66.667 0.00 0.00 0.00 3.24
3054 5007 4.214327 GAGCGGGGCGGAAGAGAG 62.214 72.222 0.00 0.00 0.00 3.20
3055 5008 4.761058 AGAGCGGGGCGGAAGAGA 62.761 66.667 0.00 0.00 0.00 3.10
3056 5009 3.775654 AAGAGCGGGGCGGAAGAG 61.776 66.667 0.00 0.00 0.00 2.85
3057 5010 4.082523 CAAGAGCGGGGCGGAAGA 62.083 66.667 0.00 0.00 0.00 2.87
3083 5036 3.241059 GTAGACGCACGCTCGCTG 61.241 66.667 0.00 0.00 0.00 5.18
3084 5037 3.432588 AGTAGACGCACGCTCGCT 61.433 61.111 0.00 0.00 0.00 4.93
3085 5038 3.241059 CAGTAGACGCACGCTCGC 61.241 66.667 0.00 0.00 0.00 5.03
3086 5039 3.241059 GCAGTAGACGCACGCTCG 61.241 66.667 0.00 0.00 0.00 5.03
3087 5040 2.126463 TGCAGTAGACGCACGCTC 60.126 61.111 0.00 0.00 33.55 5.03
3092 5045 2.048222 GGCTGTGCAGTAGACGCA 60.048 61.111 2.20 0.00 36.94 5.24
3093 5046 3.181967 CGGCTGTGCAGTAGACGC 61.182 66.667 12.63 0.00 40.14 5.19
3094 5047 2.507102 CCGGCTGTGCAGTAGACG 60.507 66.667 17.05 17.05 46.01 4.18
3095 5048 2.815647 GCCGGCTGTGCAGTAGAC 60.816 66.667 22.15 0.00 0.00 2.59
3096 5049 4.082523 GGCCGGCTGTGCAGTAGA 62.083 66.667 28.56 0.00 0.00 2.59
3118 5071 3.586225 ATGGTGCTGGAGGTCCCCT 62.586 63.158 0.00 0.00 36.03 4.79
3119 5072 3.017581 ATGGTGCTGGAGGTCCCC 61.018 66.667 0.00 0.00 34.29 4.81
3120 5073 2.592308 GATGGTGCTGGAGGTCCC 59.408 66.667 0.00 0.00 34.29 4.46
3121 5074 2.592308 GGATGGTGCTGGAGGTCC 59.408 66.667 0.00 0.00 0.00 4.46
3122 5075 2.592308 GGGATGGTGCTGGAGGTC 59.408 66.667 0.00 0.00 0.00 3.85
3123 5076 3.402681 CGGGATGGTGCTGGAGGT 61.403 66.667 0.00 0.00 0.00 3.85
3124 5077 4.181010 CCGGGATGGTGCTGGAGG 62.181 72.222 0.00 0.00 36.14 4.30
3125 5078 4.864334 GCCGGGATGGTGCTGGAG 62.864 72.222 2.18 0.00 36.14 3.86
3127 5080 4.864334 GAGCCGGGATGGTGCTGG 62.864 72.222 2.18 0.00 41.21 4.85
3128 5081 3.746949 GAGAGCCGGGATGGTGCTG 62.747 68.421 2.18 0.00 41.21 4.41
3129 5082 3.474570 GAGAGCCGGGATGGTGCT 61.475 66.667 2.18 0.00 41.21 4.40
3130 5083 4.554036 GGAGAGCCGGGATGGTGC 62.554 72.222 2.18 0.00 41.21 5.01
3131 5084 3.866582 GGGAGAGCCGGGATGGTG 61.867 72.222 2.18 0.00 41.21 4.17
3142 5095 3.450115 GTGGTCGTCGGGGGAGAG 61.450 72.222 0.00 0.00 0.00 3.20
3143 5096 3.595428 ATGTGGTCGTCGGGGGAGA 62.595 63.158 0.00 0.00 0.00 3.71
3144 5097 3.075005 ATGTGGTCGTCGGGGGAG 61.075 66.667 0.00 0.00 0.00 4.30
3145 5098 3.072468 GATGTGGTCGTCGGGGGA 61.072 66.667 0.00 0.00 0.00 4.81
3146 5099 3.387091 TGATGTGGTCGTCGGGGG 61.387 66.667 0.00 0.00 32.69 5.40
3147 5100 2.125673 GTGATGTGGTCGTCGGGG 60.126 66.667 0.00 0.00 32.69 5.73
3148 5101 0.806102 GATGTGATGTGGTCGTCGGG 60.806 60.000 0.00 0.00 32.69 5.14
3149 5102 0.108851 TGATGTGATGTGGTCGTCGG 60.109 55.000 0.00 0.00 32.69 4.79
3150 5103 1.271876 CTGATGTGATGTGGTCGTCG 58.728 55.000 0.00 0.00 32.69 5.12
3151 5104 1.645034 CCTGATGTGATGTGGTCGTC 58.355 55.000 0.00 0.00 0.00 4.20
3152 5105 0.250234 CCCTGATGTGATGTGGTCGT 59.750 55.000 0.00 0.00 0.00 4.34
3153 5106 0.250234 ACCCTGATGTGATGTGGTCG 59.750 55.000 0.00 0.00 0.00 4.79
3154 5107 1.742761 CACCCTGATGTGATGTGGTC 58.257 55.000 0.00 0.00 38.55 4.02
3155 5108 0.322816 GCACCCTGATGTGATGTGGT 60.323 55.000 0.00 0.00 38.55 4.16
3156 5109 1.371337 CGCACCCTGATGTGATGTGG 61.371 60.000 0.00 0.00 38.55 4.17
3157 5110 0.391528 TCGCACCCTGATGTGATGTG 60.392 55.000 0.00 0.00 38.55 3.21
3158 5111 0.107993 CTCGCACCCTGATGTGATGT 60.108 55.000 0.00 0.00 38.39 3.06
3159 5112 1.434622 GCTCGCACCCTGATGTGATG 61.435 60.000 0.00 0.00 38.39 3.07
3160 5113 1.153289 GCTCGCACCCTGATGTGAT 60.153 57.895 0.00 0.00 38.39 3.06
3161 5114 2.230994 GAGCTCGCACCCTGATGTGA 62.231 60.000 0.00 0.00 38.55 3.58
3162 5115 1.812922 GAGCTCGCACCCTGATGTG 60.813 63.158 0.00 0.00 39.29 3.21
3163 5116 1.954362 GAGAGCTCGCACCCTGATGT 61.954 60.000 13.06 0.00 0.00 3.06
3164 5117 1.227205 GAGAGCTCGCACCCTGATG 60.227 63.158 13.06 0.00 0.00 3.07
3165 5118 1.381056 AGAGAGCTCGCACCCTGAT 60.381 57.895 20.08 0.00 34.09 2.90
3166 5119 2.036414 AGAGAGCTCGCACCCTGA 59.964 61.111 20.08 0.00 34.09 3.86
3167 5120 2.003658 GAGAGAGAGCTCGCACCCTG 62.004 65.000 20.08 0.00 45.98 4.45
3168 5121 1.752694 GAGAGAGAGCTCGCACCCT 60.753 63.158 20.08 12.68 45.98 4.34
3169 5122 2.804856 GAGAGAGAGCTCGCACCC 59.195 66.667 20.08 8.16 45.98 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.