Multiple sequence alignment - TraesCS3A01G155500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G155500 chr3A 100.000 3475 0 0 1 3475 148614893 148618367 0.000000e+00 6418.0
1 TraesCS3A01G155500 chr3D 88.657 2592 163 74 198 2715 134556020 134558554 0.000000e+00 3037.0
2 TraesCS3A01G155500 chr3D 86.076 79 6 2 2745 2823 134558554 134558627 2.880000e-11 80.5
3 TraesCS3A01G155500 chr3B 90.108 1860 107 38 359 2164 190909814 190911650 0.000000e+00 2344.0
4 TraesCS3A01G155500 chr3B 91.570 344 14 5 2242 2573 190911820 190912160 8.790000e-126 460.0
5 TraesCS3A01G155500 chr3B 86.992 123 13 3 3342 3464 190912855 190912974 6.050000e-28 135.0
6 TraesCS3A01G155500 chr3B 90.476 84 2 5 2746 2823 190912284 190912367 4.740000e-19 106.0
7 TraesCS3A01G155500 chr2A 99.485 194 1 0 1 194 1217472 1217665 1.530000e-93 353.0
8 TraesCS3A01G155500 chr7A 97.906 191 4 0 4 194 49640643 49640453 7.190000e-87 331.0
9 TraesCS3A01G155500 chr6B 90.000 200 16 3 1 196 708259618 708259817 4.450000e-64 255.0
10 TraesCS3A01G155500 chr6B 88.601 193 20 2 3 195 683820803 683820613 2.090000e-57 233.0
11 TraesCS3A01G155500 chr6D 88.776 196 21 1 1 196 450552407 450552213 4.480000e-59 239.0
12 TraesCS3A01G155500 chr5D 88.776 196 21 1 1 196 370443783 370443977 4.480000e-59 239.0
13 TraesCS3A01G155500 chr4B 87.817 197 18 4 1 194 642433129 642433322 3.490000e-55 226.0
14 TraesCS3A01G155500 chr4B 86.010 193 26 1 1 193 77281881 77281690 4.550000e-49 206.0
15 TraesCS3A01G155500 chr1D 87.755 196 21 3 1 195 10831461 10831654 3.490000e-55 226.0
16 TraesCS3A01G155500 chr2B 83.582 201 20 8 2 196 24985404 24985211 3.560000e-40 176.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G155500 chr3A 148614893 148618367 3474 False 6418.00 6418 100.0000 1 3475 1 chr3A.!!$F1 3474
1 TraesCS3A01G155500 chr3D 134556020 134558627 2607 False 1558.75 3037 87.3665 198 2823 2 chr3D.!!$F1 2625
2 TraesCS3A01G155500 chr3B 190909814 190912974 3160 False 761.25 2344 89.7865 359 3464 4 chr3B.!!$F1 3105

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
61 62 0.035317 TGTTGATGCTCCAACTCGCT 59.965 50.0 17.92 0.0 44.87 4.93 F
80 81 0.116541 TCTCCCCTTTCGGTCTCCTT 59.883 55.0 0.00 0.0 0.00 3.36 F
2004 2078 0.177836 ATCCGTGCATGATCGTTGGA 59.822 50.0 7.72 0.0 0.00 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2017 2091 0.372679 CGTGCATGTCATGTCAGCTC 59.627 55.0 14.26 0.51 0.0 4.09 R
2019 2093 1.358877 TACGTGCATGTCATGTCAGC 58.641 50.0 16.44 0.45 43.5 4.26 R
3435 3810 0.101399 TGTTTCGGCGCATTGTTTGT 59.899 45.0 10.83 0.00 0.0 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 6.373779 ACTCATTTTAGAGTCATTTGTTGCG 58.626 36.000 0.00 0.00 45.35 4.85
35 36 5.698832 TCATTTTAGAGTCATTTGTTGCGG 58.301 37.500 0.00 0.00 0.00 5.69
36 37 4.497473 TTTTAGAGTCATTTGTTGCGGG 57.503 40.909 0.00 0.00 0.00 6.13
37 38 2.851263 TAGAGTCATTTGTTGCGGGT 57.149 45.000 0.00 0.00 0.00 5.28
38 39 1.981256 AGAGTCATTTGTTGCGGGTT 58.019 45.000 0.00 0.00 0.00 4.11
39 40 2.306847 AGAGTCATTTGTTGCGGGTTT 58.693 42.857 0.00 0.00 0.00 3.27
40 41 2.293399 AGAGTCATTTGTTGCGGGTTTC 59.707 45.455 0.00 0.00 0.00 2.78
41 42 1.339929 AGTCATTTGTTGCGGGTTTCC 59.660 47.619 0.00 0.00 0.00 3.13
42 43 1.339929 GTCATTTGTTGCGGGTTTCCT 59.660 47.619 0.00 0.00 0.00 3.36
43 44 1.339610 TCATTTGTTGCGGGTTTCCTG 59.660 47.619 0.00 0.00 0.00 3.86
44 45 1.068434 CATTTGTTGCGGGTTTCCTGT 59.932 47.619 0.00 0.00 31.34 4.00
45 46 1.187087 TTTGTTGCGGGTTTCCTGTT 58.813 45.000 0.00 0.00 31.34 3.16
46 47 0.457851 TTGTTGCGGGTTTCCTGTTG 59.542 50.000 0.00 0.00 31.34 3.33
47 48 0.394488 TGTTGCGGGTTTCCTGTTGA 60.394 50.000 0.00 0.00 31.34 3.18
48 49 0.958822 GTTGCGGGTTTCCTGTTGAT 59.041 50.000 0.00 0.00 31.34 2.57
49 50 0.958091 TTGCGGGTTTCCTGTTGATG 59.042 50.000 0.00 0.00 31.34 3.07
50 51 1.212751 GCGGGTTTCCTGTTGATGC 59.787 57.895 0.00 0.00 31.34 3.91
51 52 1.244019 GCGGGTTTCCTGTTGATGCT 61.244 55.000 0.00 0.00 31.34 3.79
52 53 0.804989 CGGGTTTCCTGTTGATGCTC 59.195 55.000 0.00 0.00 0.00 4.26
53 54 1.177401 GGGTTTCCTGTTGATGCTCC 58.823 55.000 0.00 0.00 0.00 4.70
54 55 1.547675 GGGTTTCCTGTTGATGCTCCA 60.548 52.381 0.00 0.00 0.00 3.86
55 56 2.238521 GGTTTCCTGTTGATGCTCCAA 58.761 47.619 0.00 0.00 0.00 3.53
56 57 2.029918 GGTTTCCTGTTGATGCTCCAAC 60.030 50.000 12.70 12.70 44.84 3.77
57 58 2.887152 GTTTCCTGTTGATGCTCCAACT 59.113 45.455 17.92 0.00 44.87 3.16
58 59 2.479566 TCCTGTTGATGCTCCAACTC 57.520 50.000 17.92 0.01 44.87 3.01
59 60 1.081892 CCTGTTGATGCTCCAACTCG 58.918 55.000 17.92 11.30 44.87 4.18
60 61 0.445436 CTGTTGATGCTCCAACTCGC 59.555 55.000 17.92 0.00 44.87 5.03
61 62 0.035317 TGTTGATGCTCCAACTCGCT 59.965 50.000 17.92 0.00 44.87 4.93
62 63 0.723981 GTTGATGCTCCAACTCGCTC 59.276 55.000 12.43 0.00 42.20 5.03
63 64 0.610174 TTGATGCTCCAACTCGCTCT 59.390 50.000 0.00 0.00 0.00 4.09
64 65 0.174389 TGATGCTCCAACTCGCTCTC 59.826 55.000 0.00 0.00 0.00 3.20
65 66 0.529555 GATGCTCCAACTCGCTCTCC 60.530 60.000 0.00 0.00 0.00 3.71
66 67 1.965754 ATGCTCCAACTCGCTCTCCC 61.966 60.000 0.00 0.00 0.00 4.30
67 68 2.896443 CTCCAACTCGCTCTCCCC 59.104 66.667 0.00 0.00 0.00 4.81
68 69 1.684049 CTCCAACTCGCTCTCCCCT 60.684 63.158 0.00 0.00 0.00 4.79
69 70 1.229209 TCCAACTCGCTCTCCCCTT 60.229 57.895 0.00 0.00 0.00 3.95
70 71 0.836400 TCCAACTCGCTCTCCCCTTT 60.836 55.000 0.00 0.00 0.00 3.11
71 72 0.391793 CCAACTCGCTCTCCCCTTTC 60.392 60.000 0.00 0.00 0.00 2.62
72 73 0.737715 CAACTCGCTCTCCCCTTTCG 60.738 60.000 0.00 0.00 0.00 3.46
73 74 1.889530 AACTCGCTCTCCCCTTTCGG 61.890 60.000 0.00 0.00 0.00 4.30
74 75 2.283676 TCGCTCTCCCCTTTCGGT 60.284 61.111 0.00 0.00 0.00 4.69
75 76 2.184579 CGCTCTCCCCTTTCGGTC 59.815 66.667 0.00 0.00 0.00 4.79
76 77 2.352032 CGCTCTCCCCTTTCGGTCT 61.352 63.158 0.00 0.00 0.00 3.85
77 78 1.518302 GCTCTCCCCTTTCGGTCTC 59.482 63.158 0.00 0.00 0.00 3.36
78 79 1.962321 GCTCTCCCCTTTCGGTCTCC 61.962 65.000 0.00 0.00 0.00 3.71
79 80 0.324830 CTCTCCCCTTTCGGTCTCCT 60.325 60.000 0.00 0.00 0.00 3.69
80 81 0.116541 TCTCCCCTTTCGGTCTCCTT 59.883 55.000 0.00 0.00 0.00 3.36
81 82 0.984995 CTCCCCTTTCGGTCTCCTTT 59.015 55.000 0.00 0.00 0.00 3.11
82 83 1.351350 CTCCCCTTTCGGTCTCCTTTT 59.649 52.381 0.00 0.00 0.00 2.27
83 84 1.073284 TCCCCTTTCGGTCTCCTTTTG 59.927 52.381 0.00 0.00 0.00 2.44
84 85 0.881796 CCCTTTCGGTCTCCTTTTGC 59.118 55.000 0.00 0.00 0.00 3.68
85 86 1.545651 CCCTTTCGGTCTCCTTTTGCT 60.546 52.381 0.00 0.00 0.00 3.91
86 87 2.230660 CCTTTCGGTCTCCTTTTGCTT 58.769 47.619 0.00 0.00 0.00 3.91
87 88 3.408634 CCTTTCGGTCTCCTTTTGCTTA 58.591 45.455 0.00 0.00 0.00 3.09
88 89 3.437049 CCTTTCGGTCTCCTTTTGCTTAG 59.563 47.826 0.00 0.00 0.00 2.18
89 90 3.764237 TTCGGTCTCCTTTTGCTTAGT 57.236 42.857 0.00 0.00 0.00 2.24
90 91 3.314541 TCGGTCTCCTTTTGCTTAGTC 57.685 47.619 0.00 0.00 0.00 2.59
91 92 1.993370 CGGTCTCCTTTTGCTTAGTCG 59.007 52.381 0.00 0.00 0.00 4.18
92 93 2.609737 CGGTCTCCTTTTGCTTAGTCGT 60.610 50.000 0.00 0.00 0.00 4.34
93 94 3.400255 GGTCTCCTTTTGCTTAGTCGTT 58.600 45.455 0.00 0.00 0.00 3.85
94 95 3.813724 GGTCTCCTTTTGCTTAGTCGTTT 59.186 43.478 0.00 0.00 0.00 3.60
95 96 4.275196 GGTCTCCTTTTGCTTAGTCGTTTT 59.725 41.667 0.00 0.00 0.00 2.43
96 97 5.441543 GTCTCCTTTTGCTTAGTCGTTTTC 58.558 41.667 0.00 0.00 0.00 2.29
97 98 5.236695 GTCTCCTTTTGCTTAGTCGTTTTCT 59.763 40.000 0.00 0.00 0.00 2.52
98 99 6.423001 GTCTCCTTTTGCTTAGTCGTTTTCTA 59.577 38.462 0.00 0.00 0.00 2.10
99 100 6.645415 TCTCCTTTTGCTTAGTCGTTTTCTAG 59.355 38.462 0.00 0.00 0.00 2.43
100 101 6.285990 TCCTTTTGCTTAGTCGTTTTCTAGT 58.714 36.000 0.00 0.00 0.00 2.57
101 102 7.436118 TCCTTTTGCTTAGTCGTTTTCTAGTA 58.564 34.615 0.00 0.00 0.00 1.82
102 103 7.597743 TCCTTTTGCTTAGTCGTTTTCTAGTAG 59.402 37.037 0.00 0.00 0.00 2.57
103 104 6.701432 TTTGCTTAGTCGTTTTCTAGTAGC 57.299 37.500 0.00 0.00 0.00 3.58
104 105 4.741342 TGCTTAGTCGTTTTCTAGTAGCC 58.259 43.478 0.00 0.00 0.00 3.93
105 106 4.111198 GCTTAGTCGTTTTCTAGTAGCCC 58.889 47.826 0.00 0.00 0.00 5.19
106 107 4.381292 GCTTAGTCGTTTTCTAGTAGCCCA 60.381 45.833 0.00 0.00 0.00 5.36
107 108 5.717119 CTTAGTCGTTTTCTAGTAGCCCAA 58.283 41.667 0.00 0.00 0.00 4.12
108 109 4.820894 AGTCGTTTTCTAGTAGCCCAAT 57.179 40.909 0.00 0.00 0.00 3.16
109 110 4.504858 AGTCGTTTTCTAGTAGCCCAATG 58.495 43.478 0.00 0.00 0.00 2.82
110 111 3.621715 GTCGTTTTCTAGTAGCCCAATGG 59.378 47.826 0.00 0.00 0.00 3.16
120 121 3.221389 CCCAATGGGCGATGGCTG 61.221 66.667 4.89 0.00 35.35 4.85
121 122 2.440796 CCAATGGGCGATGGCTGT 60.441 61.111 0.00 0.00 39.81 4.40
122 123 1.152984 CCAATGGGCGATGGCTGTA 60.153 57.895 0.00 0.00 39.81 2.74
123 124 0.751277 CCAATGGGCGATGGCTGTAA 60.751 55.000 0.00 0.00 39.81 2.41
124 125 1.102154 CAATGGGCGATGGCTGTAAA 58.898 50.000 0.00 0.00 39.81 2.01
125 126 1.476085 CAATGGGCGATGGCTGTAAAA 59.524 47.619 0.00 0.00 39.81 1.52
126 127 1.846007 ATGGGCGATGGCTGTAAAAA 58.154 45.000 0.00 0.00 39.81 1.94
127 128 0.885196 TGGGCGATGGCTGTAAAAAC 59.115 50.000 0.00 0.00 39.81 2.43
128 129 1.173913 GGGCGATGGCTGTAAAAACT 58.826 50.000 0.00 0.00 39.81 2.66
129 130 2.290387 TGGGCGATGGCTGTAAAAACTA 60.290 45.455 0.00 0.00 39.81 2.24
130 131 2.096980 GGGCGATGGCTGTAAAAACTAC 59.903 50.000 0.00 0.00 39.81 2.73
131 132 3.007635 GGCGATGGCTGTAAAAACTACT 58.992 45.455 0.00 0.00 39.81 2.57
132 133 3.181510 GGCGATGGCTGTAAAAACTACTG 60.182 47.826 0.00 0.00 39.81 2.74
133 134 3.682858 GCGATGGCTGTAAAAACTACTGA 59.317 43.478 0.00 0.00 35.83 3.41
134 135 4.201724 GCGATGGCTGTAAAAACTACTGAG 60.202 45.833 0.00 0.00 35.83 3.35
135 136 5.168569 CGATGGCTGTAAAAACTACTGAGA 58.831 41.667 0.00 0.00 0.00 3.27
136 137 5.062308 CGATGGCTGTAAAAACTACTGAGAC 59.938 44.000 0.00 0.00 0.00 3.36
137 138 5.546621 TGGCTGTAAAAACTACTGAGACT 57.453 39.130 0.00 0.00 0.00 3.24
138 139 5.297547 TGGCTGTAAAAACTACTGAGACTG 58.702 41.667 0.00 0.00 0.00 3.51
139 140 4.152580 GGCTGTAAAAACTACTGAGACTGC 59.847 45.833 0.00 0.00 0.00 4.40
140 141 4.991687 GCTGTAAAAACTACTGAGACTGCT 59.008 41.667 0.00 0.00 0.00 4.24
141 142 5.107298 GCTGTAAAAACTACTGAGACTGCTG 60.107 44.000 0.00 0.00 0.00 4.41
142 143 5.914033 TGTAAAAACTACTGAGACTGCTGT 58.086 37.500 0.00 0.00 0.00 4.40
143 144 7.046292 TGTAAAAACTACTGAGACTGCTGTA 57.954 36.000 0.00 0.00 0.00 2.74
144 145 7.667557 TGTAAAAACTACTGAGACTGCTGTAT 58.332 34.615 0.00 0.00 0.00 2.29
145 146 8.148351 TGTAAAAACTACTGAGACTGCTGTATT 58.852 33.333 0.00 0.00 0.00 1.89
146 147 8.989980 GTAAAAACTACTGAGACTGCTGTATTT 58.010 33.333 0.00 0.00 0.00 1.40
147 148 7.659652 AAAACTACTGAGACTGCTGTATTTC 57.340 36.000 0.00 0.00 0.00 2.17
148 149 5.331876 ACTACTGAGACTGCTGTATTTCC 57.668 43.478 0.00 0.00 0.00 3.13
149 150 3.238108 ACTGAGACTGCTGTATTTCCG 57.762 47.619 0.00 0.00 0.00 4.30
150 151 2.563179 ACTGAGACTGCTGTATTTCCGT 59.437 45.455 0.00 0.00 0.00 4.69
151 152 3.006967 ACTGAGACTGCTGTATTTCCGTT 59.993 43.478 0.00 0.00 0.00 4.44
152 153 4.219944 ACTGAGACTGCTGTATTTCCGTTA 59.780 41.667 0.00 0.00 0.00 3.18
153 154 5.142061 TGAGACTGCTGTATTTCCGTTAA 57.858 39.130 0.00 0.00 0.00 2.01
154 155 5.168569 TGAGACTGCTGTATTTCCGTTAAG 58.831 41.667 0.00 0.00 0.00 1.85
155 156 3.933332 AGACTGCTGTATTTCCGTTAAGC 59.067 43.478 0.00 0.00 0.00 3.09
156 157 3.670625 ACTGCTGTATTTCCGTTAAGCA 58.329 40.909 0.00 0.00 38.27 3.91
157 158 4.069304 ACTGCTGTATTTCCGTTAAGCAA 58.931 39.130 0.00 0.00 39.92 3.91
158 159 4.700213 ACTGCTGTATTTCCGTTAAGCAAT 59.300 37.500 0.00 0.00 39.92 3.56
159 160 5.183140 ACTGCTGTATTTCCGTTAAGCAATT 59.817 36.000 0.00 0.00 39.92 2.32
160 161 6.373216 ACTGCTGTATTTCCGTTAAGCAATTA 59.627 34.615 0.00 0.00 39.92 1.40
161 162 7.094549 ACTGCTGTATTTCCGTTAAGCAATTAA 60.095 33.333 0.00 0.00 39.92 1.40
162 163 7.767261 TGCTGTATTTCCGTTAAGCAATTAAT 58.233 30.769 0.00 0.00 37.69 1.40
163 164 7.700234 TGCTGTATTTCCGTTAAGCAATTAATG 59.300 33.333 0.00 0.00 37.69 1.90
164 165 7.167468 GCTGTATTTCCGTTAAGCAATTAATGG 59.833 37.037 11.22 11.22 42.29 3.16
165 166 8.282455 TGTATTTCCGTTAAGCAATTAATGGA 57.718 30.769 14.72 14.72 45.75 3.41
169 170 6.202516 TCCGTTAAGCAATTAATGGAAAGG 57.797 37.500 15.86 0.00 44.95 3.11
170 171 5.126384 TCCGTTAAGCAATTAATGGAAAGGG 59.874 40.000 15.86 0.63 44.95 3.95
171 172 5.348164 CGTTAAGCAATTAATGGAAAGGGG 58.652 41.667 0.00 0.00 0.00 4.79
172 173 5.105513 CGTTAAGCAATTAATGGAAAGGGGT 60.106 40.000 0.00 0.00 0.00 4.95
173 174 4.824479 AAGCAATTAATGGAAAGGGGTG 57.176 40.909 0.00 0.00 0.00 4.61
174 175 3.790126 AGCAATTAATGGAAAGGGGTGT 58.210 40.909 0.00 0.00 0.00 4.16
175 176 3.515104 AGCAATTAATGGAAAGGGGTGTG 59.485 43.478 0.00 0.00 0.00 3.82
176 177 3.513515 GCAATTAATGGAAAGGGGTGTGA 59.486 43.478 0.00 0.00 0.00 3.58
177 178 4.381932 GCAATTAATGGAAAGGGGTGTGAG 60.382 45.833 0.00 0.00 0.00 3.51
178 179 2.507407 TAATGGAAAGGGGTGTGAGC 57.493 50.000 0.00 0.00 0.00 4.26
179 180 0.251787 AATGGAAAGGGGTGTGAGCC 60.252 55.000 0.00 0.00 34.31 4.70
187 188 3.948719 GGTGTGAGCCCGGTTGGA 61.949 66.667 0.00 0.00 37.49 3.53
188 189 2.112297 GTGTGAGCCCGGTTGGAA 59.888 61.111 0.00 0.00 37.49 3.53
189 190 1.527380 GTGTGAGCCCGGTTGGAAA 60.527 57.895 0.00 0.00 37.49 3.13
190 191 1.104577 GTGTGAGCCCGGTTGGAAAA 61.105 55.000 0.00 0.00 37.49 2.29
191 192 0.395862 TGTGAGCCCGGTTGGAAAAA 60.396 50.000 0.00 0.00 37.49 1.94
284 285 9.277565 CAATGTATTTTGTGTATGTGTCTAAGC 57.722 33.333 0.00 0.00 0.00 3.09
290 291 5.932619 TGTGTATGTGTCTAAGCCATACT 57.067 39.130 9.60 0.00 40.85 2.12
300 301 6.586844 GTGTCTAAGCCATACTCCGATATTTC 59.413 42.308 0.00 0.00 0.00 2.17
306 307 5.540337 AGCCATACTCCGATATTTCTCAAGA 59.460 40.000 0.00 0.00 0.00 3.02
341 342 9.895138 TTATAATATGACATGCAGCATATCAGT 57.105 29.630 20.71 9.99 36.86 3.41
342 343 6.496338 AATATGACATGCAGCATATCAGTG 57.504 37.500 20.71 6.21 36.86 3.66
343 344 3.271055 TGACATGCAGCATATCAGTGT 57.729 42.857 12.54 4.42 0.00 3.55
344 345 2.940410 TGACATGCAGCATATCAGTGTG 59.060 45.455 12.54 0.00 0.00 3.82
345 346 2.289820 GACATGCAGCATATCAGTGTGG 59.710 50.000 7.82 0.00 0.00 4.17
346 347 2.092807 ACATGCAGCATATCAGTGTGGA 60.093 45.455 7.82 0.00 0.00 4.02
347 348 3.146847 CATGCAGCATATCAGTGTGGAT 58.853 45.455 7.82 0.00 0.00 3.41
348 349 4.202388 ACATGCAGCATATCAGTGTGGATA 60.202 41.667 7.82 0.00 34.47 2.59
384 385 1.344763 GACCACTCACACACCTAGCTT 59.655 52.381 0.00 0.00 0.00 3.74
387 388 2.563179 CCACTCACACACCTAGCTTAGT 59.437 50.000 0.00 0.00 0.00 2.24
390 391 4.021894 CACTCACACACCTAGCTTAGTTCT 60.022 45.833 0.00 0.00 0.00 3.01
396 397 5.595133 ACACACCTAGCTTAGTTCTCTATCC 59.405 44.000 0.00 0.00 0.00 2.59
406 407 4.116747 AGTTCTCTATCCTGCTCAAACG 57.883 45.455 0.00 0.00 0.00 3.60
461 462 6.441093 TGTGCTCTCATTCCAAATATCAAC 57.559 37.500 0.00 0.00 0.00 3.18
502 503 3.759581 AGAGAGCAGATTGCCAAAAGAA 58.240 40.909 0.00 0.00 46.52 2.52
606 607 2.237392 AGCCCCTCTAAGCACTGTTAAG 59.763 50.000 0.00 0.00 0.00 1.85
623 624 6.539649 TGTTAAGTAACAGCACTTCATCAC 57.460 37.500 0.00 0.00 40.93 3.06
643 647 1.338020 CGCTTTGTCTTTTCCTGGCTT 59.662 47.619 0.00 0.00 0.00 4.35
652 656 6.064060 TGTCTTTTCCTGGCTTCCATATATG 58.936 40.000 5.68 5.68 30.82 1.78
682 686 1.139989 GACAGTGTCATCCGTGTGTG 58.860 55.000 18.54 0.00 32.09 3.82
699 703 3.198068 GTGTGCTTGACTGAACTCTCAA 58.802 45.455 0.00 0.00 0.00 3.02
721 725 7.559486 TCAATTGCTTATGTCAGATAGTGAGT 58.441 34.615 0.00 0.00 35.13 3.41
782 786 6.254589 GTGTATCTCAGTTGCTTATGTCAGAC 59.745 42.308 0.00 0.00 0.00 3.51
813 817 5.794894 ACTCCAAGTTGTGTATCTAGTTGG 58.205 41.667 1.45 0.00 46.30 3.77
815 819 6.495872 ACTCCAAGTTGTGTATCTAGTTGGTA 59.504 38.462 1.45 3.60 45.64 3.25
859 863 2.752354 TCAAGCTCACTCTCAGCTCTAC 59.248 50.000 0.00 0.00 46.96 2.59
860 864 2.754552 CAAGCTCACTCTCAGCTCTACT 59.245 50.000 0.00 0.00 46.96 2.57
861 865 2.643551 AGCTCACTCTCAGCTCTACTC 58.356 52.381 0.00 0.00 44.25 2.59
862 866 2.239654 AGCTCACTCTCAGCTCTACTCT 59.760 50.000 0.00 0.00 44.25 3.24
863 867 2.355756 GCTCACTCTCAGCTCTACTCTG 59.644 54.545 0.00 0.00 33.75 3.35
864 868 2.355756 CTCACTCTCAGCTCTACTCTGC 59.644 54.545 0.00 0.00 0.00 4.26
865 869 1.405105 CACTCTCAGCTCTACTCTGCC 59.595 57.143 0.00 0.00 0.00 4.85
866 870 0.662619 CTCTCAGCTCTACTCTGCCG 59.337 60.000 0.00 0.00 0.00 5.69
867 871 1.065600 CTCAGCTCTACTCTGCCGC 59.934 63.158 0.00 0.00 0.00 6.53
868 872 2.105930 CAGCTCTACTCTGCCGCC 59.894 66.667 0.00 0.00 0.00 6.13
869 873 3.522731 AGCTCTACTCTGCCGCCG 61.523 66.667 0.00 0.00 0.00 6.46
870 874 3.518998 GCTCTACTCTGCCGCCGA 61.519 66.667 0.00 0.00 0.00 5.54
871 875 2.851071 GCTCTACTCTGCCGCCGAT 61.851 63.158 0.00 0.00 0.00 4.18
879 884 3.417275 CTGCCGCCGATCTCTCGTT 62.417 63.158 0.00 0.00 43.49 3.85
907 912 4.567971 GTGCCCAAAATTCATGTGATTCA 58.432 39.130 0.00 0.00 0.00 2.57
908 913 4.996122 GTGCCCAAAATTCATGTGATTCAA 59.004 37.500 0.00 0.00 0.00 2.69
910 915 6.017275 GTGCCCAAAATTCATGTGATTCAAAA 60.017 34.615 0.00 0.00 0.00 2.44
1047 1088 2.434428 CAGAAGAAGAGCAGCAATGGT 58.566 47.619 0.00 0.00 0.00 3.55
1354 1398 1.229209 GGTGTGGGAGGAGGAGTGA 60.229 63.158 0.00 0.00 0.00 3.41
1380 1424 3.787001 CCGTTCTCTCCCAGGGCC 61.787 72.222 0.00 0.00 0.00 5.80
1383 1427 4.332543 TTCTCTCCCAGGGCCGGT 62.333 66.667 1.90 0.00 0.00 5.28
1385 1429 2.840102 CTCTCCCAGGGCCGGTAG 60.840 72.222 1.90 7.07 0.00 3.18
1593 1637 2.649034 GCGGTGTTCTCGTCCTCA 59.351 61.111 0.00 0.00 0.00 3.86
1599 1643 3.379445 TTCTCGTCCTCACCCGCC 61.379 66.667 0.00 0.00 0.00 6.13
1974 2039 2.282674 ACGAGGCAGGGTACGTCA 60.283 61.111 0.00 0.00 33.80 4.35
1976 2041 0.394762 ACGAGGCAGGGTACGTCATA 60.395 55.000 0.00 0.00 33.80 2.15
1978 2043 1.400737 GAGGCAGGGTACGTCATACT 58.599 55.000 0.00 0.00 33.87 2.12
1982 2047 2.692041 GGCAGGGTACGTCATACTACTT 59.308 50.000 0.00 0.00 33.87 2.24
1984 2049 3.379372 GCAGGGTACGTCATACTACTTCA 59.621 47.826 0.00 0.00 33.87 3.02
1992 2066 3.486108 CGTCATACTACTTCAATCCGTGC 59.514 47.826 0.00 0.00 0.00 5.34
2000 2074 1.935873 CTTCAATCCGTGCATGATCGT 59.064 47.619 7.72 0.00 0.00 3.73
2001 2075 2.022764 TCAATCCGTGCATGATCGTT 57.977 45.000 7.72 0.00 0.00 3.85
2002 2076 1.665169 TCAATCCGTGCATGATCGTTG 59.335 47.619 7.72 6.82 0.00 4.10
2003 2077 1.016627 AATCCGTGCATGATCGTTGG 58.983 50.000 7.72 0.00 0.00 3.77
2004 2078 0.177836 ATCCGTGCATGATCGTTGGA 59.822 50.000 7.72 0.00 0.00 3.53
2006 2080 1.018752 CCGTGCATGATCGTTGGACA 61.019 55.000 7.72 0.00 35.40 4.02
2007 2081 0.795698 CGTGCATGATCGTTGGACAA 59.204 50.000 16.58 0.00 35.40 3.18
2008 2082 1.196581 CGTGCATGATCGTTGGACAAA 59.803 47.619 16.58 0.00 35.40 2.83
2009 2083 2.350293 CGTGCATGATCGTTGGACAAAA 60.350 45.455 16.58 0.00 35.40 2.44
2011 2085 4.236935 GTGCATGATCGTTGGACAAAAAT 58.763 39.130 13.07 0.00 35.71 1.82
2012 2086 4.324402 GTGCATGATCGTTGGACAAAAATC 59.676 41.667 13.07 0.00 35.71 2.17
2013 2087 3.859386 GCATGATCGTTGGACAAAAATCC 59.141 43.478 0.00 0.00 39.45 3.01
2021 2095 3.795688 TGGACAAAAATCCAGAGAGCT 57.204 42.857 0.00 0.00 44.14 4.09
2022 2096 3.415212 TGGACAAAAATCCAGAGAGCTG 58.585 45.455 0.00 0.00 44.14 4.24
2023 2097 3.072915 TGGACAAAAATCCAGAGAGCTGA 59.927 43.478 0.00 0.00 44.14 4.26
2024 2098 3.438434 GGACAAAAATCCAGAGAGCTGAC 59.562 47.826 0.00 0.00 45.17 3.51
2025 2099 4.067896 GACAAAAATCCAGAGAGCTGACA 58.932 43.478 0.00 0.00 45.17 3.58
2026 2100 4.660168 ACAAAAATCCAGAGAGCTGACAT 58.340 39.130 0.00 0.00 45.17 3.06
2027 2101 4.458295 ACAAAAATCCAGAGAGCTGACATG 59.542 41.667 0.00 0.00 45.17 3.21
2028 2102 4.564782 AAAATCCAGAGAGCTGACATGA 57.435 40.909 0.00 0.00 45.17 3.07
2030 2104 1.928868 TCCAGAGAGCTGACATGACA 58.071 50.000 0.00 0.00 45.17 3.58
2031 2105 2.464782 TCCAGAGAGCTGACATGACAT 58.535 47.619 0.00 0.00 45.17 3.06
2032 2106 2.167900 TCCAGAGAGCTGACATGACATG 59.832 50.000 14.02 14.02 45.17 3.21
2037 2111 0.321034 AGCTGACATGACATGCACGT 60.321 50.000 15.49 0.00 0.00 4.49
2038 2112 1.066929 AGCTGACATGACATGCACGTA 60.067 47.619 15.49 0.00 0.00 3.57
2041 2115 2.931969 CTGACATGACATGCACGTATGT 59.068 45.455 15.49 3.62 43.61 2.29
2059 2145 1.003118 TGTGTTGCAGGGATACTCCAC 59.997 52.381 0.00 0.00 38.64 4.02
2164 2250 4.380531 TCAAGACCAAGAAGTGTAAGCAG 58.619 43.478 0.00 0.00 0.00 4.24
2165 2251 2.772287 AGACCAAGAAGTGTAAGCAGC 58.228 47.619 0.00 0.00 0.00 5.25
2166 2252 2.104792 AGACCAAGAAGTGTAAGCAGCA 59.895 45.455 0.00 0.00 0.00 4.41
2167 2253 2.222027 ACCAAGAAGTGTAAGCAGCAC 58.778 47.619 0.00 0.00 37.13 4.40
2184 2374 4.070716 CAGCACTCTTTCTGAATCCACTT 58.929 43.478 0.00 0.00 32.26 3.16
2185 2375 4.153835 CAGCACTCTTTCTGAATCCACTTC 59.846 45.833 0.00 0.00 32.26 3.01
2200 2394 7.396339 TGAATCCACTTCAGTAGTAGTACATGT 59.604 37.037 10.33 2.69 38.97 3.21
2202 2396 8.998277 ATCCACTTCAGTAGTAGTACATGTAT 57.002 34.615 9.18 1.24 34.56 2.29
2203 2397 8.447924 TCCACTTCAGTAGTAGTACATGTATC 57.552 38.462 9.18 3.27 34.56 2.24
2205 2399 8.129840 CCACTTCAGTAGTAGTACATGTATCAC 58.870 40.741 9.18 9.90 34.56 3.06
2206 2400 8.674607 CACTTCAGTAGTAGTACATGTATCACA 58.325 37.037 9.18 0.00 34.56 3.58
2207 2401 8.894731 ACTTCAGTAGTAGTACATGTATCACAG 58.105 37.037 9.18 5.28 34.56 3.66
2208 2402 8.803397 TTCAGTAGTAGTACATGTATCACAGT 57.197 34.615 9.18 0.94 0.00 3.55
2209 2403 8.434733 TCAGTAGTAGTACATGTATCACAGTC 57.565 38.462 9.18 5.24 0.00 3.51
2210 2404 8.265764 TCAGTAGTAGTACATGTATCACAGTCT 58.734 37.037 9.18 2.12 0.00 3.24
2211 2405 8.552865 CAGTAGTAGTACATGTATCACAGTCTC 58.447 40.741 9.18 0.00 0.00 3.36
2212 2406 8.487848 AGTAGTAGTACATGTATCACAGTCTCT 58.512 37.037 9.18 0.66 0.00 3.10
2229 2423 8.828644 CACAGTCTCTAATATAACTCTGTACGT 58.171 37.037 0.00 0.00 34.29 3.57
2232 2426 9.190858 AGTCTCTAATATAACTCTGTACGTACG 57.809 37.037 20.18 15.01 0.00 3.67
2233 2427 8.973378 GTCTCTAATATAACTCTGTACGTACGT 58.027 37.037 25.98 25.98 0.00 3.57
2234 2428 9.186323 TCTCTAATATAACTCTGTACGTACGTC 57.814 37.037 26.53 16.55 0.00 4.34
2235 2429 8.299262 TCTAATATAACTCTGTACGTACGTCC 57.701 38.462 26.53 15.03 0.00 4.79
2236 2430 8.144478 TCTAATATAACTCTGTACGTACGTCCT 58.856 37.037 26.53 2.59 0.00 3.85
2237 2431 4.871993 ATAACTCTGTACGTACGTCCTG 57.128 45.455 26.53 17.69 0.00 3.86
2238 2432 1.446907 ACTCTGTACGTACGTCCTGG 58.553 55.000 26.53 14.37 0.00 4.45
2239 2433 1.002430 ACTCTGTACGTACGTCCTGGA 59.998 52.381 26.53 16.74 0.00 3.86
2240 2434 2.286872 CTCTGTACGTACGTCCTGGAT 58.713 52.381 26.53 0.01 0.00 3.41
2245 2439 2.825861 ACGTACGTCCTGGATTTTGT 57.174 45.000 16.72 0.00 0.00 2.83
2263 2457 0.744281 GTTTCAGGTGTTGTGGTGGG 59.256 55.000 0.00 0.00 0.00 4.61
2395 2589 2.746671 CAGGCAGGAGCAGCACAG 60.747 66.667 0.00 0.00 44.61 3.66
2465 2659 2.746279 TGAACATCACCCACCTTGTT 57.254 45.000 0.00 0.00 35.14 2.83
2466 2660 2.305928 TGAACATCACCCACCTTGTTG 58.694 47.619 0.00 0.00 32.73 3.33
2467 2661 2.306847 GAACATCACCCACCTTGTTGT 58.693 47.619 0.00 0.00 32.73 3.32
2547 2753 5.452078 TCGATCACATCTGCATGTATGTA 57.548 39.130 8.61 0.00 41.69 2.29
2548 2754 6.029346 TCGATCACATCTGCATGTATGTAT 57.971 37.500 8.61 4.79 41.69 2.29
2549 2755 7.156876 TCGATCACATCTGCATGTATGTATA 57.843 36.000 8.61 2.84 41.69 1.47
2551 2757 8.902806 TCGATCACATCTGCATGTATGTATATA 58.097 33.333 8.61 0.00 41.69 0.86
2573 2779 7.783090 ATACTTGTGATTCAGTATTCTGCTG 57.217 36.000 0.00 0.00 41.10 4.41
2577 2783 4.154737 TGTGATTCAGTATTCTGCTGTTGC 59.845 41.667 0.00 0.00 41.10 4.17
2590 2796 1.070309 GCTGTTGCTGAACTGAACGAG 60.070 52.381 0.00 0.00 33.90 4.18
2593 2799 1.193426 GTTGCTGAACTGAACGAGCTC 59.807 52.381 2.73 2.73 32.41 4.09
2597 2803 1.000283 CTGAACTGAACGAGCTCTGGT 60.000 52.381 12.85 3.77 0.00 4.00
2598 2804 1.000163 TGAACTGAACGAGCTCTGGTC 60.000 52.381 12.85 13.69 33.01 4.02
2600 2806 0.600557 ACTGAACGAGCTCTGGTCTG 59.399 55.000 20.43 20.43 0.00 3.51
2602 2808 0.827925 TGAACGAGCTCTGGTCTGGT 60.828 55.000 19.48 4.18 0.00 4.00
2605 2811 1.247419 ACGAGCTCTGGTCTGGTCTG 61.247 60.000 12.85 0.00 0.00 3.51
2607 2813 0.613292 GAGCTCTGGTCTGGTCTGGA 60.613 60.000 6.43 0.00 0.00 3.86
2608 2814 0.042431 AGCTCTGGTCTGGTCTGGAT 59.958 55.000 0.00 0.00 0.00 3.41
2610 2816 0.177604 CTCTGGTCTGGTCTGGATGC 59.822 60.000 0.00 0.00 0.00 3.91
2611 2817 1.153489 CTGGTCTGGTCTGGATGCG 60.153 63.158 0.00 0.00 0.00 4.73
2616 2822 1.066303 GTCTGGTCTGGATGCGACTAG 59.934 57.143 13.14 13.14 40.19 2.57
2628 2834 3.013276 TGCGACTAGTGTTCTGTGAAG 57.987 47.619 0.00 0.00 0.00 3.02
2654 2864 3.698263 ATCCCCCGACTCCTCACCC 62.698 68.421 0.00 0.00 0.00 4.61
2658 2868 2.352032 CCCGACTCCTCACCCTGTC 61.352 68.421 0.00 0.00 0.00 3.51
2668 2878 3.158676 CCTCACCCTGTCTAGTATAGCC 58.841 54.545 0.00 0.00 38.99 3.93
2673 2883 1.075050 CCTGTCTAGTATAGCCGGGGA 59.925 57.143 2.18 0.00 39.39 4.81
2694 2904 1.777272 AGGGCACTCTCCTCTGTTTTT 59.223 47.619 0.00 0.00 0.00 1.94
2695 2905 2.155279 GGGCACTCTCCTCTGTTTTTC 58.845 52.381 0.00 0.00 0.00 2.29
2696 2906 2.155279 GGCACTCTCCTCTGTTTTTCC 58.845 52.381 0.00 0.00 0.00 3.13
2697 2907 2.155279 GCACTCTCCTCTGTTTTTCCC 58.845 52.381 0.00 0.00 0.00 3.97
2698 2908 2.224646 GCACTCTCCTCTGTTTTTCCCT 60.225 50.000 0.00 0.00 0.00 4.20
2712 2922 2.935481 CCCTCCCAAGTCCCAGCA 60.935 66.667 0.00 0.00 0.00 4.41
2713 2923 2.538141 CCCTCCCAAGTCCCAGCAA 61.538 63.158 0.00 0.00 0.00 3.91
2715 2925 1.672356 CTCCCAAGTCCCAGCAACG 60.672 63.158 0.00 0.00 0.00 4.10
2716 2926 2.111999 CTCCCAAGTCCCAGCAACGA 62.112 60.000 0.00 0.00 0.00 3.85
2717 2927 1.672356 CCCAAGTCCCAGCAACGAG 60.672 63.158 0.00 0.00 0.00 4.18
2719 2929 1.672356 CAAGTCCCAGCAACGAGGG 60.672 63.158 0.00 0.00 46.90 4.30
2720 2930 3.553095 AAGTCCCAGCAACGAGGGC 62.553 63.158 0.00 0.00 45.07 5.19
2722 2932 4.329545 TCCCAGCAACGAGGGCAC 62.330 66.667 0.00 0.00 45.07 5.01
2772 2982 2.510238 GCAGCGCGTCATCCTCTT 60.510 61.111 8.43 0.00 0.00 2.85
2823 3039 2.716864 GGCTCTCTCGCGAGGTAC 59.283 66.667 33.98 20.67 37.86 3.34
2824 3040 2.716864 GCTCTCTCGCGAGGTACC 59.283 66.667 33.98 17.31 37.86 3.34
2825 3041 2.113433 GCTCTCTCGCGAGGTACCA 61.113 63.158 33.98 14.99 37.86 3.25
2826 3042 2.018544 CTCTCTCGCGAGGTACCAG 58.981 63.158 33.98 23.39 37.86 4.00
2827 3043 0.745128 CTCTCTCGCGAGGTACCAGT 60.745 60.000 33.98 0.00 37.86 4.00
2828 3044 0.743701 TCTCTCGCGAGGTACCAGTC 60.744 60.000 33.98 2.52 37.86 3.51
2829 3045 1.716826 CTCTCGCGAGGTACCAGTCC 61.717 65.000 33.98 0.00 33.51 3.85
2830 3046 2.753043 TCGCGAGGTACCAGTCCC 60.753 66.667 15.94 0.00 0.00 4.46
2831 3047 3.066190 CGCGAGGTACCAGTCCCA 61.066 66.667 15.94 0.00 0.00 4.37
2832 3048 2.423898 CGCGAGGTACCAGTCCCAT 61.424 63.158 15.94 0.00 0.00 4.00
2833 3049 1.905512 GCGAGGTACCAGTCCCATT 59.094 57.895 15.94 0.00 0.00 3.16
2835 3051 0.462047 CGAGGTACCAGTCCCATTGC 60.462 60.000 15.94 0.00 0.00 3.56
2836 3052 0.618458 GAGGTACCAGTCCCATTGCA 59.382 55.000 15.94 0.00 0.00 4.08
2837 3053 1.004277 GAGGTACCAGTCCCATTGCAA 59.996 52.381 15.94 0.00 0.00 4.08
2838 3054 1.640670 AGGTACCAGTCCCATTGCAAT 59.359 47.619 15.94 5.99 0.00 3.56
2839 3055 2.042979 AGGTACCAGTCCCATTGCAATT 59.957 45.455 15.94 0.00 0.00 2.32
2840 3056 2.831526 GGTACCAGTCCCATTGCAATTT 59.168 45.455 9.83 0.00 0.00 1.82
2841 3057 3.368323 GGTACCAGTCCCATTGCAATTTG 60.368 47.826 9.83 3.82 0.00 2.32
2843 3059 2.705127 ACCAGTCCCATTGCAATTTGTT 59.295 40.909 9.83 0.00 0.00 2.83
2844 3060 3.136260 ACCAGTCCCATTGCAATTTGTTT 59.864 39.130 9.83 0.00 0.00 2.83
2845 3061 3.747529 CCAGTCCCATTGCAATTTGTTTC 59.252 43.478 9.83 0.00 0.00 2.78
2846 3062 3.747529 CAGTCCCATTGCAATTTGTTTCC 59.252 43.478 9.83 0.00 0.00 3.13
2847 3063 3.647590 AGTCCCATTGCAATTTGTTTCCT 59.352 39.130 9.83 0.00 0.00 3.36
2848 3064 4.837860 AGTCCCATTGCAATTTGTTTCCTA 59.162 37.500 9.83 0.00 0.00 2.94
2850 3066 4.837860 TCCCATTGCAATTTGTTTCCTACT 59.162 37.500 9.83 0.00 0.00 2.57
2851 3067 5.047377 TCCCATTGCAATTTGTTTCCTACTC 60.047 40.000 9.83 0.00 0.00 2.59
2852 3068 5.170748 CCATTGCAATTTGTTTCCTACTCC 58.829 41.667 9.83 0.00 0.00 3.85
2854 3070 3.482436 TGCAATTTGTTTCCTACTCCGT 58.518 40.909 0.00 0.00 0.00 4.69
2855 3071 3.500680 TGCAATTTGTTTCCTACTCCGTC 59.499 43.478 0.00 0.00 0.00 4.79
2858 3074 3.672767 TTTGTTTCCTACTCCGTCTCC 57.327 47.619 0.00 0.00 0.00 3.71
2859 3075 2.599408 TGTTTCCTACTCCGTCTCCT 57.401 50.000 0.00 0.00 0.00 3.69
2860 3076 3.726557 TGTTTCCTACTCCGTCTCCTA 57.273 47.619 0.00 0.00 0.00 2.94
2861 3077 4.246712 TGTTTCCTACTCCGTCTCCTAT 57.753 45.455 0.00 0.00 0.00 2.57
2863 3079 5.759059 TGTTTCCTACTCCGTCTCCTATTA 58.241 41.667 0.00 0.00 0.00 0.98
2864 3080 5.826737 TGTTTCCTACTCCGTCTCCTATTAG 59.173 44.000 0.00 0.00 0.00 1.73
2866 3082 5.901413 TCCTACTCCGTCTCCTATTAGAA 57.099 43.478 0.00 0.00 0.00 2.10
2869 3085 7.622713 TCCTACTCCGTCTCCTATTAGAATAG 58.377 42.308 2.76 2.76 38.45 1.73
2870 3086 7.457218 TCCTACTCCGTCTCCTATTAGAATAGA 59.543 40.741 10.30 0.00 40.63 1.98
2872 3088 9.504708 CTACTCCGTCTCCTATTAGAATAGAAA 57.495 37.037 10.30 0.00 40.63 2.52
2873 3089 8.763984 ACTCCGTCTCCTATTAGAATAGAAAA 57.236 34.615 10.30 0.00 40.63 2.29
2874 3090 9.369672 ACTCCGTCTCCTATTAGAATAGAAAAT 57.630 33.333 10.30 0.00 40.63 1.82
2877 3093 9.849166 CCGTCTCCTATTAGAATAGAAAATCTC 57.151 37.037 10.30 0.00 40.63 2.75
2893 3154 8.395940 AGAAAATCTCTATAAACACGAGAACG 57.604 34.615 0.00 0.00 37.35 3.95
2894 3155 8.242053 AGAAAATCTCTATAAACACGAGAACGA 58.758 33.333 0.00 0.00 37.35 3.85
2895 3156 7.737525 AAATCTCTATAAACACGAGAACGAC 57.262 36.000 0.00 0.00 42.66 4.34
2896 3157 5.868043 TCTCTATAAACACGAGAACGACA 57.132 39.130 0.00 0.00 42.66 4.35
2897 3158 6.432607 TCTCTATAAACACGAGAACGACAT 57.567 37.500 0.00 0.00 42.66 3.06
2898 3159 6.255950 TCTCTATAAACACGAGAACGACATG 58.744 40.000 0.00 0.00 42.66 3.21
2899 3160 5.337554 TCTATAAACACGAGAACGACATGG 58.662 41.667 0.00 0.00 42.66 3.66
2900 3161 0.865769 AAACACGAGAACGACATGGC 59.134 50.000 0.00 0.00 42.66 4.40
2901 3162 0.033504 AACACGAGAACGACATGGCT 59.966 50.000 0.00 0.00 42.66 4.75
2902 3163 0.885879 ACACGAGAACGACATGGCTA 59.114 50.000 0.00 0.00 42.66 3.93
2903 3164 1.269166 CACGAGAACGACATGGCTAC 58.731 55.000 0.00 0.00 42.66 3.58
2904 3165 0.172803 ACGAGAACGACATGGCTACC 59.827 55.000 0.00 0.00 42.66 3.18
2906 3167 0.172803 GAGAACGACATGGCTACCGT 59.827 55.000 0.00 0.00 36.77 4.83
2908 3169 1.404391 AGAACGACATGGCTACCGTAG 59.596 52.381 0.00 0.76 34.60 3.51
2916 3177 4.223514 GCTACCGTAGCCGAATCG 57.776 61.111 18.33 0.00 45.95 3.34
2920 3181 1.332997 CTACCGTAGCCGAATCGTTCT 59.667 52.381 0.82 0.86 35.63 3.01
2921 3182 1.382522 ACCGTAGCCGAATCGTTCTA 58.617 50.000 0.82 0.00 35.63 2.10
2922 3183 1.064654 ACCGTAGCCGAATCGTTCTAC 59.935 52.381 16.74 16.74 35.63 2.59
2926 3187 3.492383 CGTAGCCGAATCGTTCTACTCTA 59.508 47.826 21.06 3.76 32.82 2.43
2928 3189 2.617774 AGCCGAATCGTTCTACTCTACC 59.382 50.000 0.82 0.00 0.00 3.18
2931 3192 2.287373 CGAATCGTTCTACTCTACCGCT 59.713 50.000 0.00 0.00 0.00 5.52
2932 3193 3.492383 CGAATCGTTCTACTCTACCGCTA 59.508 47.826 0.00 0.00 0.00 4.26
2934 3195 2.555199 TCGTTCTACTCTACCGCTACC 58.445 52.381 0.00 0.00 0.00 3.18
2946 3246 2.739132 GCTACCGGTAATCCCCCG 59.261 66.667 16.65 2.96 45.07 5.73
2956 3256 0.472352 TAATCCCCCGGCGTCCTAAT 60.472 55.000 6.01 0.00 0.00 1.73
2961 3261 1.068585 CCCGGCGTCCTAATACCAC 59.931 63.158 6.01 0.00 0.00 4.16
2965 3265 4.744316 CGTCCTAATACCACGCCC 57.256 61.111 0.00 0.00 0.00 6.13
2967 3267 1.068585 GTCCTAATACCACGCCCCG 59.931 63.158 0.00 0.00 0.00 5.73
2968 3268 2.280592 CCTAATACCACGCCCCGC 60.281 66.667 0.00 0.00 0.00 6.13
3019 3325 4.416738 GCTTGCTCGAAGGCCCCT 62.417 66.667 0.00 0.00 31.56 4.79
3056 3362 2.818714 CTCCGCTGCTGCCTTCAG 60.819 66.667 10.24 0.00 43.16 3.02
3057 3363 4.399395 TCCGCTGCTGCCTTCAGG 62.399 66.667 10.24 5.10 40.65 3.86
3060 3366 2.103042 CGCTGCTGCCTTCAGGTAC 61.103 63.158 10.24 0.00 40.65 3.34
3062 3368 0.537188 GCTGCTGCCTTCAGGTACTA 59.463 55.000 3.85 0.00 40.65 1.82
3063 3369 1.066143 GCTGCTGCCTTCAGGTACTAA 60.066 52.381 3.85 0.00 40.65 2.24
3064 3370 2.420687 GCTGCTGCCTTCAGGTACTAAT 60.421 50.000 3.85 0.00 40.65 1.73
3065 3371 3.181465 GCTGCTGCCTTCAGGTACTAATA 60.181 47.826 3.85 0.00 40.65 0.98
3066 3372 4.372656 CTGCTGCCTTCAGGTACTAATAC 58.627 47.826 0.00 0.00 40.65 1.89
3067 3373 3.181479 TGCTGCCTTCAGGTACTAATACG 60.181 47.826 0.00 0.00 40.65 3.06
3068 3374 3.067742 GCTGCCTTCAGGTACTAATACGA 59.932 47.826 0.00 0.00 40.65 3.43
3069 3375 4.262079 GCTGCCTTCAGGTACTAATACGAT 60.262 45.833 0.00 0.00 40.65 3.73
3071 3377 5.839621 TGCCTTCAGGTACTAATACGATTC 58.160 41.667 0.00 0.00 36.02 2.52
3073 3379 6.151004 GCCTTCAGGTACTAATACGATTCTC 58.849 44.000 0.00 0.00 36.02 2.87
3074 3380 6.372185 CCTTCAGGTACTAATACGATTCTCG 58.628 44.000 0.00 0.00 41.82 4.04
3075 3381 6.204301 CCTTCAGGTACTAATACGATTCTCGA 59.796 42.308 3.20 0.00 38.91 4.04
3076 3382 7.094720 CCTTCAGGTACTAATACGATTCTCGAT 60.095 40.741 3.20 0.00 38.91 3.59
3077 3383 7.130303 TCAGGTACTAATACGATTCTCGATG 57.870 40.000 3.20 0.00 38.91 3.84
3078 3384 5.795939 CAGGTACTAATACGATTCTCGATGC 59.204 44.000 3.20 0.00 38.91 3.91
3079 3385 5.706369 AGGTACTAATACGATTCTCGATGCT 59.294 40.000 3.20 0.00 38.91 3.79
3092 3398 3.114809 CTCGATGCTAAGCTTCTGTGAG 58.885 50.000 0.00 0.50 31.76 3.51
3093 3399 2.755103 TCGATGCTAAGCTTCTGTGAGA 59.245 45.455 0.00 0.00 31.76 3.27
3095 3470 4.118410 CGATGCTAAGCTTCTGTGAGATT 58.882 43.478 0.00 0.00 31.76 2.40
3101 3476 6.488006 TGCTAAGCTTCTGTGAGATTTTCTTT 59.512 34.615 0.00 0.00 0.00 2.52
3105 3480 4.764308 GCTTCTGTGAGATTTTCTTTCCCT 59.236 41.667 0.00 0.00 0.00 4.20
3106 3481 5.242615 GCTTCTGTGAGATTTTCTTTCCCTT 59.757 40.000 0.00 0.00 0.00 3.95
3107 3482 6.639632 TTCTGTGAGATTTTCTTTCCCTTG 57.360 37.500 0.00 0.00 0.00 3.61
3108 3483 5.694995 TCTGTGAGATTTTCTTTCCCTTGT 58.305 37.500 0.00 0.00 0.00 3.16
3109 3484 5.532406 TCTGTGAGATTTTCTTTCCCTTGTG 59.468 40.000 0.00 0.00 0.00 3.33
3112 3487 6.831353 TGTGAGATTTTCTTTCCCTTGTGTTA 59.169 34.615 0.00 0.00 0.00 2.41
3121 3496 3.237268 TCCCTTGTGTTATGGCTTGTT 57.763 42.857 0.00 0.00 0.00 2.83
3122 3497 4.374689 TCCCTTGTGTTATGGCTTGTTA 57.625 40.909 0.00 0.00 0.00 2.41
3123 3498 4.730966 TCCCTTGTGTTATGGCTTGTTAA 58.269 39.130 0.00 0.00 0.00 2.01
3124 3499 5.329399 TCCCTTGTGTTATGGCTTGTTAAT 58.671 37.500 0.00 0.00 0.00 1.40
3125 3500 5.417580 TCCCTTGTGTTATGGCTTGTTAATC 59.582 40.000 0.00 0.00 0.00 1.75
3126 3501 5.331902 CCTTGTGTTATGGCTTGTTAATCG 58.668 41.667 0.00 0.00 0.00 3.34
3127 3502 5.123186 CCTTGTGTTATGGCTTGTTAATCGA 59.877 40.000 0.00 0.00 0.00 3.59
3128 3503 5.794687 TGTGTTATGGCTTGTTAATCGAG 57.205 39.130 0.00 0.00 0.00 4.04
3129 3504 5.483811 TGTGTTATGGCTTGTTAATCGAGA 58.516 37.500 0.00 0.00 0.00 4.04
3130 3505 5.580691 TGTGTTATGGCTTGTTAATCGAGAG 59.419 40.000 0.00 0.00 0.00 3.20
3131 3506 5.006746 GTGTTATGGCTTGTTAATCGAGAGG 59.993 44.000 0.00 0.00 0.00 3.69
3132 3507 5.105106 TGTTATGGCTTGTTAATCGAGAGGA 60.105 40.000 0.00 0.00 0.00 3.71
3133 3508 3.973206 TGGCTTGTTAATCGAGAGGAA 57.027 42.857 0.00 0.00 0.00 3.36
3134 3509 4.280436 TGGCTTGTTAATCGAGAGGAAA 57.720 40.909 0.00 0.00 0.00 3.13
3135 3510 4.253685 TGGCTTGTTAATCGAGAGGAAAG 58.746 43.478 0.00 0.00 0.00 2.62
3136 3511 4.254492 GGCTTGTTAATCGAGAGGAAAGT 58.746 43.478 0.00 0.00 0.00 2.66
3137 3512 5.046878 TGGCTTGTTAATCGAGAGGAAAGTA 60.047 40.000 0.00 0.00 0.00 2.24
3138 3513 5.520649 GGCTTGTTAATCGAGAGGAAAGTAG 59.479 44.000 0.00 0.00 0.00 2.57
3139 3514 5.005875 GCTTGTTAATCGAGAGGAAAGTAGC 59.994 44.000 0.00 0.00 0.00 3.58
3140 3515 5.916661 TGTTAATCGAGAGGAAAGTAGCT 57.083 39.130 0.00 0.00 0.00 3.32
3141 3516 7.400599 TTGTTAATCGAGAGGAAAGTAGCTA 57.599 36.000 0.00 0.00 0.00 3.32
3142 3517 7.028926 TGTTAATCGAGAGGAAAGTAGCTAG 57.971 40.000 0.00 0.00 0.00 3.42
3143 3518 6.039493 TGTTAATCGAGAGGAAAGTAGCTAGG 59.961 42.308 0.00 0.00 0.00 3.02
3144 3519 3.648507 TCGAGAGGAAAGTAGCTAGGT 57.351 47.619 0.00 0.00 0.00 3.08
3145 3520 3.965694 TCGAGAGGAAAGTAGCTAGGTT 58.034 45.455 0.00 0.00 0.00 3.50
3146 3521 4.342359 TCGAGAGGAAAGTAGCTAGGTTT 58.658 43.478 0.00 0.00 0.00 3.27
3147 3522 4.398673 TCGAGAGGAAAGTAGCTAGGTTTC 59.601 45.833 15.73 15.73 0.00 2.78
3148 3523 4.158025 CGAGAGGAAAGTAGCTAGGTTTCA 59.842 45.833 21.72 0.00 32.77 2.69
3149 3524 5.656480 GAGAGGAAAGTAGCTAGGTTTCAG 58.344 45.833 21.72 0.00 32.77 3.02
3150 3525 4.081365 AGAGGAAAGTAGCTAGGTTTCAGC 60.081 45.833 21.72 15.40 39.41 4.26
3156 3531 1.799383 GCTAGGTTTCAGCTGCTGC 59.201 57.895 24.38 7.62 36.07 5.25
3157 3532 1.975363 GCTAGGTTTCAGCTGCTGCG 61.975 60.000 24.38 2.40 45.42 5.18
3158 3533 1.975363 CTAGGTTTCAGCTGCTGCGC 61.975 60.000 24.38 15.35 45.42 6.09
3159 3534 4.748679 GGTTTCAGCTGCTGCGCG 62.749 66.667 24.38 0.00 45.42 6.86
3160 3535 3.716006 GTTTCAGCTGCTGCGCGA 61.716 61.111 24.38 4.63 45.42 5.87
3161 3536 3.417224 TTTCAGCTGCTGCGCGAG 61.417 61.111 24.38 5.65 45.42 5.03
3162 3537 3.864160 TTTCAGCTGCTGCGCGAGA 62.864 57.895 24.38 3.44 45.42 4.04
3163 3538 3.654173 TTCAGCTGCTGCGCGAGAT 62.654 57.895 24.38 0.00 45.42 2.75
3164 3539 3.926413 CAGCTGCTGCGCGAGATG 61.926 66.667 17.73 2.63 45.42 2.90
3167 3542 3.493440 CTGCTGCGCGAGATGCAA 61.493 61.111 12.10 0.00 46.97 4.08
3168 3543 2.820619 CTGCTGCGCGAGATGCAAT 61.821 57.895 12.10 0.00 46.97 3.56
3169 3544 2.052414 GCTGCGCGAGATGCAATC 60.052 61.111 12.10 0.00 46.97 2.67
3183 3558 2.475200 GCAATCGGCAGGAATGTTAC 57.525 50.000 0.00 0.00 43.97 2.50
3184 3559 1.742831 GCAATCGGCAGGAATGTTACA 59.257 47.619 0.00 0.00 43.97 2.41
3185 3560 2.163412 GCAATCGGCAGGAATGTTACAA 59.837 45.455 0.00 0.00 43.97 2.41
3186 3561 3.758300 CAATCGGCAGGAATGTTACAAC 58.242 45.455 0.00 0.00 0.00 3.32
3187 3562 1.816074 TCGGCAGGAATGTTACAACC 58.184 50.000 0.00 0.00 0.00 3.77
3188 3563 1.349688 TCGGCAGGAATGTTACAACCT 59.650 47.619 8.24 8.24 0.00 3.50
3189 3564 2.159382 CGGCAGGAATGTTACAACCTT 58.841 47.619 10.69 0.00 0.00 3.50
3190 3565 2.556622 CGGCAGGAATGTTACAACCTTT 59.443 45.455 10.69 0.00 0.00 3.11
3191 3566 3.365969 CGGCAGGAATGTTACAACCTTTC 60.366 47.826 10.69 0.68 0.00 2.62
3192 3567 3.056821 GGCAGGAATGTTACAACCTTTCC 60.057 47.826 10.69 8.99 39.02 3.13
3193 3568 3.056821 GCAGGAATGTTACAACCTTTCCC 60.057 47.826 10.72 0.00 39.30 3.97
3194 3569 3.509967 CAGGAATGTTACAACCTTTCCCC 59.490 47.826 10.72 1.46 39.30 4.81
3195 3570 3.401342 AGGAATGTTACAACCTTTCCCCT 59.599 43.478 10.72 3.19 39.30 4.79
3196 3571 4.140782 AGGAATGTTACAACCTTTCCCCTT 60.141 41.667 10.72 0.00 39.30 3.95
3197 3572 4.219944 GGAATGTTACAACCTTTCCCCTTC 59.780 45.833 4.57 0.00 35.66 3.46
3198 3573 3.232720 TGTTACAACCTTTCCCCTTCC 57.767 47.619 0.00 0.00 0.00 3.46
3199 3574 2.158430 TGTTACAACCTTTCCCCTTCCC 60.158 50.000 0.00 0.00 0.00 3.97
3200 3575 2.109480 GTTACAACCTTTCCCCTTCCCT 59.891 50.000 0.00 0.00 0.00 4.20
3201 3576 1.241485 ACAACCTTTCCCCTTCCCTT 58.759 50.000 0.00 0.00 0.00 3.95
3202 3577 1.578703 ACAACCTTTCCCCTTCCCTTT 59.421 47.619 0.00 0.00 0.00 3.11
3203 3578 1.970640 CAACCTTTCCCCTTCCCTTTG 59.029 52.381 0.00 0.00 0.00 2.77
3204 3579 0.487325 ACCTTTCCCCTTCCCTTTGG 59.513 55.000 0.00 0.00 0.00 3.28
3205 3580 0.252239 CCTTTCCCCTTCCCTTTGGG 60.252 60.000 0.00 0.00 46.11 4.12
3221 3596 6.755542 CCTTTGGGGTCTCTTAGATTAGAT 57.244 41.667 0.00 0.00 0.00 1.98
3222 3597 7.142995 CCTTTGGGGTCTCTTAGATTAGATT 57.857 40.000 0.00 0.00 0.00 2.40
3223 3598 7.578203 CCTTTGGGGTCTCTTAGATTAGATTT 58.422 38.462 0.00 0.00 0.00 2.17
3224 3599 7.717436 CCTTTGGGGTCTCTTAGATTAGATTTC 59.283 40.741 0.00 0.00 0.00 2.17
3225 3600 7.996758 TTGGGGTCTCTTAGATTAGATTTCT 57.003 36.000 0.00 0.00 0.00 2.52
3226 3601 7.604657 TGGGGTCTCTTAGATTAGATTTCTC 57.395 40.000 0.00 0.00 0.00 2.87
3227 3602 6.265649 TGGGGTCTCTTAGATTAGATTTCTCG 59.734 42.308 0.00 0.00 0.00 4.04
3228 3603 6.490721 GGGGTCTCTTAGATTAGATTTCTCGA 59.509 42.308 0.00 0.00 0.00 4.04
3229 3604 7.364970 GGGTCTCTTAGATTAGATTTCTCGAC 58.635 42.308 0.00 0.00 0.00 4.20
3230 3605 7.364970 GGTCTCTTAGATTAGATTTCTCGACC 58.635 42.308 0.00 0.00 0.00 4.79
3231 3606 7.013464 GGTCTCTTAGATTAGATTTCTCGACCA 59.987 40.741 0.00 0.00 0.00 4.02
3232 3607 8.073768 GTCTCTTAGATTAGATTTCTCGACCAG 58.926 40.741 0.00 0.00 0.00 4.00
3233 3608 7.993758 TCTCTTAGATTAGATTTCTCGACCAGA 59.006 37.037 0.00 0.00 0.00 3.86
3234 3609 8.521170 TCTTAGATTAGATTTCTCGACCAGAA 57.479 34.615 0.00 0.00 39.56 3.02
3243 3618 2.688507 TCTCGACCAGAAATTGACTGC 58.311 47.619 7.21 0.00 34.47 4.40
3244 3619 1.734465 CTCGACCAGAAATTGACTGCC 59.266 52.381 7.21 2.32 34.47 4.85
3245 3620 1.071542 TCGACCAGAAATTGACTGCCA 59.928 47.619 7.21 0.00 34.47 4.92
3246 3621 1.466167 CGACCAGAAATTGACTGCCAG 59.534 52.381 7.21 0.00 34.47 4.85
3247 3622 1.815003 GACCAGAAATTGACTGCCAGG 59.185 52.381 0.00 0.00 34.47 4.45
3248 3623 1.425066 ACCAGAAATTGACTGCCAGGA 59.575 47.619 0.00 0.00 34.47 3.86
3249 3624 2.042162 ACCAGAAATTGACTGCCAGGAT 59.958 45.455 0.00 0.00 34.47 3.24
3250 3625 2.426024 CCAGAAATTGACTGCCAGGATG 59.574 50.000 0.00 0.00 34.47 3.51
3251 3626 3.349927 CAGAAATTGACTGCCAGGATGA 58.650 45.455 0.00 0.00 39.69 2.92
3252 3627 3.760151 CAGAAATTGACTGCCAGGATGAA 59.240 43.478 0.00 0.00 39.69 2.57
3253 3628 4.401519 CAGAAATTGACTGCCAGGATGAAT 59.598 41.667 0.00 0.00 39.69 2.57
3254 3629 5.021458 AGAAATTGACTGCCAGGATGAATT 58.979 37.500 0.00 0.00 39.69 2.17
3255 3630 5.482878 AGAAATTGACTGCCAGGATGAATTT 59.517 36.000 0.00 1.30 39.69 1.82
3256 3631 6.664816 AGAAATTGACTGCCAGGATGAATTTA 59.335 34.615 0.00 0.00 39.69 1.40
3257 3632 6.855763 AATTGACTGCCAGGATGAATTTAA 57.144 33.333 0.00 0.00 39.69 1.52
3258 3633 7.427989 AATTGACTGCCAGGATGAATTTAAT 57.572 32.000 0.00 0.00 39.69 1.40
3259 3634 6.855763 TTGACTGCCAGGATGAATTTAATT 57.144 33.333 0.00 0.00 39.69 1.40
3260 3635 6.855763 TGACTGCCAGGATGAATTTAATTT 57.144 33.333 0.00 0.00 39.69 1.82
3261 3636 6.866480 TGACTGCCAGGATGAATTTAATTTC 58.134 36.000 0.00 3.62 39.69 2.17
3262 3637 5.894807 ACTGCCAGGATGAATTTAATTTCG 58.105 37.500 0.00 0.00 39.69 3.46
3263 3638 5.163519 ACTGCCAGGATGAATTTAATTTCGG 60.164 40.000 0.00 2.49 39.69 4.30
3264 3639 4.709397 TGCCAGGATGAATTTAATTTCGGT 59.291 37.500 0.00 0.00 39.69 4.69
3265 3640 5.163561 TGCCAGGATGAATTTAATTTCGGTC 60.164 40.000 0.00 6.31 39.69 4.79
3266 3641 5.736207 GCCAGGATGAATTTAATTTCGGTCC 60.736 44.000 17.82 17.82 39.69 4.46
3267 3642 5.359576 CCAGGATGAATTTAATTTCGGTCCA 59.640 40.000 22.75 4.85 39.69 4.02
3268 3643 6.040842 CCAGGATGAATTTAATTTCGGTCCAT 59.959 38.462 22.75 13.04 39.69 3.41
3269 3644 6.919662 CAGGATGAATTTAATTTCGGTCCATG 59.080 38.462 22.75 17.31 39.69 3.66
3270 3645 6.833416 AGGATGAATTTAATTTCGGTCCATGA 59.167 34.615 22.75 2.88 36.35 3.07
3271 3646 7.341769 AGGATGAATTTAATTTCGGTCCATGAA 59.658 33.333 22.75 2.38 36.35 2.57
3277 3652 7.461182 TTTAATTTCGGTCCATGAATTCAGT 57.539 32.000 14.54 0.00 0.00 3.41
3278 3653 4.970662 ATTTCGGTCCATGAATTCAGTG 57.029 40.909 14.54 11.57 0.00 3.66
3287 3662 7.472543 GGTCCATGAATTCAGTGTTAACATAC 58.527 38.462 12.26 0.00 0.00 2.39
3288 3663 7.415206 GGTCCATGAATTCAGTGTTAACATACC 60.415 40.741 12.26 0.00 0.00 2.73
3290 3665 8.544622 TCCATGAATTCAGTGTTAACATACCTA 58.455 33.333 12.26 0.00 0.00 3.08
3293 3668 9.959721 ATGAATTCAGTGTTAACATACCTAGTT 57.040 29.630 12.26 1.93 0.00 2.24
3296 3671 9.662947 AATTCAGTGTTAACATACCTAGTTACC 57.337 33.333 12.26 0.00 31.67 2.85
3297 3672 7.174107 TCAGTGTTAACATACCTAGTTACCC 57.826 40.000 12.26 0.00 31.67 3.69
3298 3673 6.725369 TCAGTGTTAACATACCTAGTTACCCA 59.275 38.462 12.26 0.00 31.67 4.51
3299 3674 7.039882 CAGTGTTAACATACCTAGTTACCCAG 58.960 42.308 12.26 0.00 31.67 4.45
3301 3676 7.895429 AGTGTTAACATACCTAGTTACCCAGTA 59.105 37.037 12.26 0.00 31.67 2.74
3306 3681 2.170012 CCTAGTTACCCAGTAGGCCA 57.830 55.000 5.01 0.00 41.04 5.36
3307 3682 2.040178 CCTAGTTACCCAGTAGGCCAG 58.960 57.143 5.01 0.00 41.04 4.85
3308 3683 2.626149 CCTAGTTACCCAGTAGGCCAGT 60.626 54.545 5.01 0.00 41.04 4.00
3309 3684 2.934263 AGTTACCCAGTAGGCCAGTA 57.066 50.000 5.01 0.00 40.58 2.74
3310 3685 2.464782 AGTTACCCAGTAGGCCAGTAC 58.535 52.381 5.01 0.00 40.58 2.73
3312 3687 2.154567 TACCCAGTAGGCCAGTACAG 57.845 55.000 5.01 0.00 40.58 2.74
3313 3688 0.116541 ACCCAGTAGGCCAGTACAGT 59.883 55.000 5.01 0.00 40.58 3.55
3314 3689 1.360162 ACCCAGTAGGCCAGTACAGTA 59.640 52.381 5.01 0.00 40.58 2.74
3315 3690 1.755380 CCCAGTAGGCCAGTACAGTAC 59.245 57.143 5.01 2.05 0.00 2.73
3316 3691 2.453521 CCAGTAGGCCAGTACAGTACA 58.546 52.381 13.37 0.00 0.00 2.90
3317 3692 2.165845 CCAGTAGGCCAGTACAGTACAC 59.834 54.545 13.37 1.35 0.00 2.90
3318 3693 3.090037 CAGTAGGCCAGTACAGTACACT 58.910 50.000 13.37 3.65 0.00 3.55
3353 3728 1.066430 TGAGGGAGCGGTACAATGTTC 60.066 52.381 0.00 0.00 0.00 3.18
3359 3734 4.127171 GGAGCGGTACAATGTTCATATGT 58.873 43.478 1.90 0.00 0.00 2.29
3360 3735 4.574828 GGAGCGGTACAATGTTCATATGTT 59.425 41.667 1.90 0.00 0.00 2.71
3361 3736 5.756347 GGAGCGGTACAATGTTCATATGTTA 59.244 40.000 1.90 0.00 0.00 2.41
3403 3778 5.146010 TCAGTTGGTCCAAATAATTTGCC 57.854 39.130 5.69 0.00 39.31 4.52
3404 3779 4.020662 TCAGTTGGTCCAAATAATTTGCCC 60.021 41.667 5.69 0.00 39.31 5.36
3405 3780 4.020307 CAGTTGGTCCAAATAATTTGCCCT 60.020 41.667 5.69 0.00 39.31 5.19
3412 3787 3.181472 CCAAATAATTTGCCCTCCTCTGC 60.181 47.826 0.00 0.00 39.31 4.26
3435 3810 1.995626 GAACAGGGGCAGGGAGCTA 60.996 63.158 0.00 0.00 44.79 3.32
3440 3815 1.378646 GGGGCAGGGAGCTACAAAC 60.379 63.158 0.00 0.00 44.79 2.93
3447 3822 0.179163 GGGAGCTACAAACAATGCGC 60.179 55.000 0.00 0.00 0.00 6.09
3455 3830 1.269517 ACAAACAATGCGCCGAAACAT 60.270 42.857 4.18 0.00 0.00 2.71
3464 3839 1.198178 GCGCCGAAACATAGGAAAACA 59.802 47.619 0.00 0.00 0.00 2.83
3465 3840 2.727916 GCGCCGAAACATAGGAAAACAG 60.728 50.000 0.00 0.00 0.00 3.16
3466 3841 2.739913 CGCCGAAACATAGGAAAACAGA 59.260 45.455 0.00 0.00 0.00 3.41
3467 3842 3.374058 CGCCGAAACATAGGAAAACAGAT 59.626 43.478 0.00 0.00 0.00 2.90
3468 3843 4.142687 CGCCGAAACATAGGAAAACAGATT 60.143 41.667 0.00 0.00 0.00 2.40
3469 3844 5.332707 GCCGAAACATAGGAAAACAGATTC 58.667 41.667 0.00 0.00 0.00 2.52
3470 3845 5.106317 GCCGAAACATAGGAAAACAGATTCA 60.106 40.000 0.00 0.00 0.00 2.57
3471 3846 6.314784 CCGAAACATAGGAAAACAGATTCAC 58.685 40.000 0.00 0.00 0.00 3.18
3472 3847 6.314784 CGAAACATAGGAAAACAGATTCACC 58.685 40.000 0.00 0.00 0.00 4.02
3473 3848 6.149474 CGAAACATAGGAAAACAGATTCACCT 59.851 38.462 0.00 0.00 33.95 4.00
3474 3849 6.824305 AACATAGGAAAACAGATTCACCTG 57.176 37.500 0.00 0.00 39.93 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.762179 ACTCTAAAATGAGTCATCCACCA 57.238 39.130 5.98 0.00 43.04 4.17
11 12 5.796935 CCGCAACAAATGACTCTAAAATGAG 59.203 40.000 0.00 0.00 39.78 2.90
12 13 5.335583 CCCGCAACAAATGACTCTAAAATGA 60.336 40.000 0.00 0.00 0.00 2.57
13 14 4.858692 CCCGCAACAAATGACTCTAAAATG 59.141 41.667 0.00 0.00 0.00 2.32
14 15 4.522789 ACCCGCAACAAATGACTCTAAAAT 59.477 37.500 0.00 0.00 0.00 1.82
15 16 3.886505 ACCCGCAACAAATGACTCTAAAA 59.113 39.130 0.00 0.00 0.00 1.52
16 17 3.482436 ACCCGCAACAAATGACTCTAAA 58.518 40.909 0.00 0.00 0.00 1.85
17 18 3.134574 ACCCGCAACAAATGACTCTAA 57.865 42.857 0.00 0.00 0.00 2.10
18 19 2.851263 ACCCGCAACAAATGACTCTA 57.149 45.000 0.00 0.00 0.00 2.43
19 20 1.981256 AACCCGCAACAAATGACTCT 58.019 45.000 0.00 0.00 0.00 3.24
20 21 2.607038 GGAAACCCGCAACAAATGACTC 60.607 50.000 0.00 0.00 0.00 3.36
21 22 1.339929 GGAAACCCGCAACAAATGACT 59.660 47.619 0.00 0.00 0.00 3.41
22 23 1.339929 AGGAAACCCGCAACAAATGAC 59.660 47.619 0.00 0.00 0.00 3.06
23 24 1.339610 CAGGAAACCCGCAACAAATGA 59.660 47.619 0.00 0.00 0.00 2.57
24 25 1.068434 ACAGGAAACCCGCAACAAATG 59.932 47.619 0.00 0.00 0.00 2.32
25 26 1.408969 ACAGGAAACCCGCAACAAAT 58.591 45.000 0.00 0.00 0.00 2.32
26 27 1.134965 CAACAGGAAACCCGCAACAAA 60.135 47.619 0.00 0.00 0.00 2.83
27 28 0.457851 CAACAGGAAACCCGCAACAA 59.542 50.000 0.00 0.00 0.00 2.83
28 29 0.394488 TCAACAGGAAACCCGCAACA 60.394 50.000 0.00 0.00 0.00 3.33
29 30 0.958822 ATCAACAGGAAACCCGCAAC 59.041 50.000 0.00 0.00 0.00 4.17
30 31 0.958091 CATCAACAGGAAACCCGCAA 59.042 50.000 0.00 0.00 0.00 4.85
31 32 1.523154 GCATCAACAGGAAACCCGCA 61.523 55.000 0.00 0.00 0.00 5.69
32 33 1.212751 GCATCAACAGGAAACCCGC 59.787 57.895 0.00 0.00 0.00 6.13
33 34 0.804989 GAGCATCAACAGGAAACCCG 59.195 55.000 0.00 0.00 33.17 5.28
34 35 1.177401 GGAGCATCAACAGGAAACCC 58.823 55.000 0.00 0.00 36.25 4.11
35 36 1.909700 TGGAGCATCAACAGGAAACC 58.090 50.000 0.00 0.00 36.25 3.27
36 37 2.887152 AGTTGGAGCATCAACAGGAAAC 59.113 45.455 19.49 0.00 46.74 2.78
37 38 3.149196 GAGTTGGAGCATCAACAGGAAA 58.851 45.455 19.49 0.00 46.74 3.13
38 39 2.783135 GAGTTGGAGCATCAACAGGAA 58.217 47.619 19.49 0.00 46.74 3.36
39 40 1.338105 CGAGTTGGAGCATCAACAGGA 60.338 52.381 19.49 0.00 46.74 3.86
40 41 1.081892 CGAGTTGGAGCATCAACAGG 58.918 55.000 19.49 10.00 46.74 4.00
41 42 0.445436 GCGAGTTGGAGCATCAACAG 59.555 55.000 19.49 14.78 46.74 3.16
42 43 0.035317 AGCGAGTTGGAGCATCAACA 59.965 50.000 19.49 0.00 46.74 3.33
43 44 0.723981 GAGCGAGTTGGAGCATCAAC 59.276 55.000 12.42 12.42 45.22 3.18
44 45 0.610174 AGAGCGAGTTGGAGCATCAA 59.390 50.000 0.00 0.00 36.25 2.57
45 46 0.174389 GAGAGCGAGTTGGAGCATCA 59.826 55.000 0.00 0.00 36.25 3.07
46 47 0.529555 GGAGAGCGAGTTGGAGCATC 60.530 60.000 0.00 0.00 35.48 3.91
47 48 1.519719 GGAGAGCGAGTTGGAGCAT 59.480 57.895 0.00 0.00 35.48 3.79
48 49 2.650116 GGGAGAGCGAGTTGGAGCA 61.650 63.158 0.00 0.00 35.48 4.26
49 50 2.185608 GGGAGAGCGAGTTGGAGC 59.814 66.667 0.00 0.00 0.00 4.70
50 51 1.261238 AAGGGGAGAGCGAGTTGGAG 61.261 60.000 0.00 0.00 0.00 3.86
51 52 0.836400 AAAGGGGAGAGCGAGTTGGA 60.836 55.000 0.00 0.00 0.00 3.53
52 53 0.391793 GAAAGGGGAGAGCGAGTTGG 60.392 60.000 0.00 0.00 0.00 3.77
53 54 0.737715 CGAAAGGGGAGAGCGAGTTG 60.738 60.000 0.00 0.00 0.00 3.16
54 55 1.592223 CGAAAGGGGAGAGCGAGTT 59.408 57.895 0.00 0.00 0.00 3.01
55 56 3.289525 CGAAAGGGGAGAGCGAGT 58.710 61.111 0.00 0.00 0.00 4.18
67 68 4.065789 ACTAAGCAAAAGGAGACCGAAAG 58.934 43.478 0.00 0.00 0.00 2.62
68 69 4.062991 GACTAAGCAAAAGGAGACCGAAA 58.937 43.478 0.00 0.00 0.00 3.46
69 70 3.660865 GACTAAGCAAAAGGAGACCGAA 58.339 45.455 0.00 0.00 0.00 4.30
70 71 2.352421 CGACTAAGCAAAAGGAGACCGA 60.352 50.000 0.00 0.00 0.00 4.69
71 72 1.993370 CGACTAAGCAAAAGGAGACCG 59.007 52.381 0.00 0.00 0.00 4.79
72 73 3.041508 ACGACTAAGCAAAAGGAGACC 57.958 47.619 0.00 0.00 0.00 3.85
73 74 5.236695 AGAAAACGACTAAGCAAAAGGAGAC 59.763 40.000 0.00 0.00 0.00 3.36
74 75 5.365619 AGAAAACGACTAAGCAAAAGGAGA 58.634 37.500 0.00 0.00 0.00 3.71
75 76 5.674933 AGAAAACGACTAAGCAAAAGGAG 57.325 39.130 0.00 0.00 0.00 3.69
76 77 6.285990 ACTAGAAAACGACTAAGCAAAAGGA 58.714 36.000 0.00 0.00 0.00 3.36
77 78 6.541111 ACTAGAAAACGACTAAGCAAAAGG 57.459 37.500 0.00 0.00 0.00 3.11
78 79 7.228150 GCTACTAGAAAACGACTAAGCAAAAG 58.772 38.462 0.00 0.00 0.00 2.27
79 80 6.146673 GGCTACTAGAAAACGACTAAGCAAAA 59.853 38.462 0.00 0.00 30.14 2.44
80 81 5.636543 GGCTACTAGAAAACGACTAAGCAAA 59.363 40.000 0.00 0.00 30.14 3.68
81 82 5.166398 GGCTACTAGAAAACGACTAAGCAA 58.834 41.667 0.00 0.00 30.14 3.91
82 83 4.381292 GGGCTACTAGAAAACGACTAAGCA 60.381 45.833 0.00 0.00 30.14 3.91
83 84 4.111198 GGGCTACTAGAAAACGACTAAGC 58.889 47.826 0.00 0.00 0.00 3.09
84 85 5.320549 TGGGCTACTAGAAAACGACTAAG 57.679 43.478 0.00 0.00 0.00 2.18
85 86 5.726980 TTGGGCTACTAGAAAACGACTAA 57.273 39.130 0.00 0.00 0.00 2.24
86 87 5.394883 CCATTGGGCTACTAGAAAACGACTA 60.395 44.000 0.00 0.00 0.00 2.59
87 88 4.504858 CATTGGGCTACTAGAAAACGACT 58.495 43.478 0.00 0.00 0.00 4.18
88 89 3.621715 CCATTGGGCTACTAGAAAACGAC 59.378 47.826 0.00 0.00 0.00 4.34
89 90 3.370103 CCCATTGGGCTACTAGAAAACGA 60.370 47.826 9.28 0.00 35.35 3.85
90 91 2.943033 CCCATTGGGCTACTAGAAAACG 59.057 50.000 9.28 0.00 35.35 3.60
104 105 0.751277 TTACAGCCATCGCCCATTGG 60.751 55.000 0.00 0.00 34.57 3.16
105 106 1.102154 TTTACAGCCATCGCCCATTG 58.898 50.000 0.00 0.00 34.57 2.82
106 107 1.846007 TTTTACAGCCATCGCCCATT 58.154 45.000 0.00 0.00 34.57 3.16
107 108 1.476488 GTTTTTACAGCCATCGCCCAT 59.524 47.619 0.00 0.00 34.57 4.00
108 109 0.885196 GTTTTTACAGCCATCGCCCA 59.115 50.000 0.00 0.00 34.57 5.36
109 110 1.173913 AGTTTTTACAGCCATCGCCC 58.826 50.000 0.00 0.00 34.57 6.13
110 111 3.007635 AGTAGTTTTTACAGCCATCGCC 58.992 45.455 0.00 0.00 34.57 5.54
111 112 3.682858 TCAGTAGTTTTTACAGCCATCGC 59.317 43.478 0.00 0.00 0.00 4.58
112 113 5.062308 GTCTCAGTAGTTTTTACAGCCATCG 59.938 44.000 0.00 0.00 0.00 3.84
113 114 6.091441 CAGTCTCAGTAGTTTTTACAGCCATC 59.909 42.308 0.00 0.00 0.00 3.51
114 115 5.934625 CAGTCTCAGTAGTTTTTACAGCCAT 59.065 40.000 0.00 0.00 0.00 4.40
115 116 5.297547 CAGTCTCAGTAGTTTTTACAGCCA 58.702 41.667 0.00 0.00 0.00 4.75
116 117 4.152580 GCAGTCTCAGTAGTTTTTACAGCC 59.847 45.833 0.00 0.00 0.00 4.85
117 118 4.991687 AGCAGTCTCAGTAGTTTTTACAGC 59.008 41.667 0.00 0.00 0.00 4.40
118 119 5.986135 ACAGCAGTCTCAGTAGTTTTTACAG 59.014 40.000 0.00 0.00 0.00 2.74
119 120 5.914033 ACAGCAGTCTCAGTAGTTTTTACA 58.086 37.500 0.00 0.00 0.00 2.41
120 121 8.535690 AATACAGCAGTCTCAGTAGTTTTTAC 57.464 34.615 0.00 0.00 0.00 2.01
121 122 9.204570 GAAATACAGCAGTCTCAGTAGTTTTTA 57.795 33.333 0.00 0.00 0.00 1.52
122 123 7.173390 GGAAATACAGCAGTCTCAGTAGTTTTT 59.827 37.037 0.00 0.00 0.00 1.94
123 124 6.651225 GGAAATACAGCAGTCTCAGTAGTTTT 59.349 38.462 0.00 0.00 0.00 2.43
124 125 6.166982 GGAAATACAGCAGTCTCAGTAGTTT 58.833 40.000 0.00 0.00 0.00 2.66
125 126 5.622460 CGGAAATACAGCAGTCTCAGTAGTT 60.622 44.000 0.00 0.00 0.00 2.24
126 127 4.142359 CGGAAATACAGCAGTCTCAGTAGT 60.142 45.833 0.00 0.00 0.00 2.73
127 128 4.142359 ACGGAAATACAGCAGTCTCAGTAG 60.142 45.833 0.00 0.00 0.00 2.57
128 129 3.762288 ACGGAAATACAGCAGTCTCAGTA 59.238 43.478 0.00 0.00 0.00 2.74
129 130 2.563179 ACGGAAATACAGCAGTCTCAGT 59.437 45.455 0.00 0.00 0.00 3.41
130 131 3.238108 ACGGAAATACAGCAGTCTCAG 57.762 47.619 0.00 0.00 0.00 3.35
131 132 3.678056 AACGGAAATACAGCAGTCTCA 57.322 42.857 0.00 0.00 0.00 3.27
132 133 4.033014 GCTTAACGGAAATACAGCAGTCTC 59.967 45.833 0.00 0.00 0.00 3.36
133 134 3.933332 GCTTAACGGAAATACAGCAGTCT 59.067 43.478 0.00 0.00 0.00 3.24
134 135 3.682858 TGCTTAACGGAAATACAGCAGTC 59.317 43.478 0.00 0.00 32.38 3.51
135 136 3.670625 TGCTTAACGGAAATACAGCAGT 58.329 40.909 0.00 0.00 32.38 4.40
136 137 4.678509 TTGCTTAACGGAAATACAGCAG 57.321 40.909 0.00 0.00 38.45 4.24
137 138 5.637006 AATTGCTTAACGGAAATACAGCA 57.363 34.783 0.00 0.00 35.49 4.41
138 139 7.167468 CCATTAATTGCTTAACGGAAATACAGC 59.833 37.037 0.00 0.00 33.01 4.40
139 140 8.402472 TCCATTAATTGCTTAACGGAAATACAG 58.598 33.333 0.00 0.00 36.52 2.74
140 141 8.282455 TCCATTAATTGCTTAACGGAAATACA 57.718 30.769 0.00 0.00 36.52 2.29
141 142 9.575783 TTTCCATTAATTGCTTAACGGAAATAC 57.424 29.630 12.22 0.00 46.39 1.89
145 146 6.350612 CCCTTTCCATTAATTGCTTAACGGAA 60.351 38.462 2.80 2.80 43.70 4.30
146 147 5.126384 CCCTTTCCATTAATTGCTTAACGGA 59.874 40.000 0.00 0.00 37.40 4.69
147 148 5.348164 CCCTTTCCATTAATTGCTTAACGG 58.652 41.667 0.00 0.00 32.61 4.44
148 149 5.105513 ACCCCTTTCCATTAATTGCTTAACG 60.106 40.000 0.00 0.00 29.85 3.18
149 150 6.106003 CACCCCTTTCCATTAATTGCTTAAC 58.894 40.000 0.00 0.00 29.85 2.01
150 151 5.782845 ACACCCCTTTCCATTAATTGCTTAA 59.217 36.000 0.00 0.00 0.00 1.85
151 152 5.186797 CACACCCCTTTCCATTAATTGCTTA 59.813 40.000 0.00 0.00 0.00 3.09
152 153 4.020307 CACACCCCTTTCCATTAATTGCTT 60.020 41.667 0.00 0.00 0.00 3.91
153 154 3.515104 CACACCCCTTTCCATTAATTGCT 59.485 43.478 0.00 0.00 0.00 3.91
154 155 3.513515 TCACACCCCTTTCCATTAATTGC 59.486 43.478 0.00 0.00 0.00 3.56
155 156 4.381932 GCTCACACCCCTTTCCATTAATTG 60.382 45.833 0.00 0.00 0.00 2.32
156 157 3.769300 GCTCACACCCCTTTCCATTAATT 59.231 43.478 0.00 0.00 0.00 1.40
157 158 3.365472 GCTCACACCCCTTTCCATTAAT 58.635 45.455 0.00 0.00 0.00 1.40
158 159 2.556559 GGCTCACACCCCTTTCCATTAA 60.557 50.000 0.00 0.00 0.00 1.40
159 160 1.005450 GGCTCACACCCCTTTCCATTA 59.995 52.381 0.00 0.00 0.00 1.90
160 161 0.251787 GGCTCACACCCCTTTCCATT 60.252 55.000 0.00 0.00 0.00 3.16
161 162 1.384191 GGCTCACACCCCTTTCCAT 59.616 57.895 0.00 0.00 0.00 3.41
162 163 2.840753 GGGCTCACACCCCTTTCCA 61.841 63.158 0.00 0.00 45.00 3.53
163 164 2.035783 GGGCTCACACCCCTTTCC 59.964 66.667 0.00 0.00 45.00 3.13
170 171 2.969300 TTTCCAACCGGGCTCACACC 62.969 60.000 6.32 0.00 36.21 4.16
171 172 1.104577 TTTTCCAACCGGGCTCACAC 61.105 55.000 6.32 0.00 36.21 3.82
172 173 0.395862 TTTTTCCAACCGGGCTCACA 60.396 50.000 6.32 0.00 36.21 3.58
173 174 2.421220 TTTTTCCAACCGGGCTCAC 58.579 52.632 6.32 0.00 36.21 3.51
284 285 8.662781 TTTTCTTGAGAAATATCGGAGTATGG 57.337 34.615 6.98 0.00 42.83 2.74
290 291 8.848474 AGTTCTTTTTCTTGAGAAATATCGGA 57.152 30.769 6.98 0.61 42.83 4.55
326 327 2.567985 TCCACACTGATATGCTGCATG 58.432 47.619 24.59 11.04 0.00 4.06
341 342 7.097192 GTCACTTAGTTGACAGAATATCCACA 58.903 38.462 9.07 0.00 44.62 4.17
342 343 6.535508 GGTCACTTAGTTGACAGAATATCCAC 59.464 42.308 13.72 0.00 46.68 4.02
343 344 6.212589 TGGTCACTTAGTTGACAGAATATCCA 59.787 38.462 13.72 0.00 46.68 3.41
344 345 6.535508 GTGGTCACTTAGTTGACAGAATATCC 59.464 42.308 13.72 0.00 46.68 2.59
345 346 7.324178 AGTGGTCACTTAGTTGACAGAATATC 58.676 38.462 13.72 0.67 46.68 1.63
346 347 7.039011 TGAGTGGTCACTTAGTTGACAGAATAT 60.039 37.037 5.02 0.00 46.68 1.28
347 348 6.266786 TGAGTGGTCACTTAGTTGACAGAATA 59.733 38.462 5.02 0.12 46.68 1.75
348 349 5.070446 TGAGTGGTCACTTAGTTGACAGAAT 59.930 40.000 5.02 3.22 46.68 2.40
384 385 4.705507 ACGTTTGAGCAGGATAGAGAACTA 59.294 41.667 0.00 0.00 0.00 2.24
387 388 4.537135 AACGTTTGAGCAGGATAGAGAA 57.463 40.909 0.00 0.00 0.00 2.87
390 391 5.580691 CACATTAACGTTTGAGCAGGATAGA 59.419 40.000 5.91 0.00 0.00 1.98
396 397 5.914635 ACATTTCACATTAACGTTTGAGCAG 59.085 36.000 5.91 0.55 0.00 4.24
406 407 9.462174 TGTTTTGATCTCACATTTCACATTAAC 57.538 29.630 0.00 0.00 0.00 2.01
461 462 2.930019 TGGAGCCCCTGGTGTCTG 60.930 66.667 0.00 0.00 0.00 3.51
502 503 0.244994 CACTGCGGCAGAGTAGAGTT 59.755 55.000 34.70 8.34 35.18 3.01
606 607 2.069273 AGCGTGATGAAGTGCTGTTAC 58.931 47.619 0.00 0.00 36.09 2.50
621 622 1.600413 GCCAGGAAAAGACAAAGCGTG 60.600 52.381 0.00 0.00 0.00 5.34
622 623 0.668535 GCCAGGAAAAGACAAAGCGT 59.331 50.000 0.00 0.00 0.00 5.07
623 624 0.954452 AGCCAGGAAAAGACAAAGCG 59.046 50.000 0.00 0.00 0.00 4.68
652 656 0.603975 GACACTGTCAGGCTTGTCCC 60.604 60.000 4.53 0.00 33.63 4.46
682 686 3.501445 AGCAATTGAGAGTTCAGTCAAGC 59.499 43.478 10.34 0.00 36.16 4.01
699 703 8.243961 AGTACTCACTATCTGACATAAGCAAT 57.756 34.615 0.00 0.00 31.45 3.56
721 725 0.898326 TGAGCTTGACCGGCAGAGTA 60.898 55.000 0.00 0.00 0.00 2.59
813 817 6.106673 TGCTAGGACAAAGCTCAATTAGTAC 58.893 40.000 0.00 0.00 40.73 2.73
815 819 5.165961 TGCTAGGACAAAGCTCAATTAGT 57.834 39.130 0.00 0.00 40.73 2.24
859 863 2.334653 GAGAGATCGGCGGCAGAG 59.665 66.667 10.53 0.00 0.00 3.35
860 864 3.586961 CGAGAGATCGGCGGCAGA 61.587 66.667 10.53 5.06 0.00 4.26
861 865 2.890847 AAACGAGAGATCGGCGGCAG 62.891 60.000 10.53 0.00 37.45 4.85
862 866 3.001902 AAACGAGAGATCGGCGGCA 62.002 57.895 10.53 0.00 37.45 5.69
863 867 2.202756 AAACGAGAGATCGGCGGC 60.203 61.111 7.21 0.00 37.45 6.53
864 868 0.099968 TACAAACGAGAGATCGGCGG 59.900 55.000 7.21 0.00 37.45 6.13
865 869 1.189403 GTACAAACGAGAGATCGGCG 58.811 55.000 0.00 0.00 37.45 6.46
879 884 3.319405 ACATGAATTTTGGGCACGTACAA 59.681 39.130 0.00 0.00 0.00 2.41
907 912 9.757227 TTCGAACATTCCACAGATTAAAATTTT 57.243 25.926 8.75 8.75 0.00 1.82
908 913 9.191995 GTTCGAACATTCCACAGATTAAAATTT 57.808 29.630 23.12 0.00 0.00 1.82
910 915 7.881142 TGTTCGAACATTCCACAGATTAAAAT 58.119 30.769 26.53 0.00 33.17 1.82
917 952 3.738982 ACATGTTCGAACATTCCACAGA 58.261 40.909 35.15 11.01 46.95 3.41
938 973 8.818141 TGAACAAAATTACACAAAGTCAACAA 57.182 26.923 0.00 0.00 0.00 2.83
1047 1088 1.752310 CTCGAGCCTCTGGAGCTGA 60.752 63.158 0.00 0.00 41.75 4.26
1334 1378 3.775654 CTCCTCCTCCCACACCGC 61.776 72.222 0.00 0.00 0.00 5.68
1335 1379 2.283966 ACTCCTCCTCCCACACCG 60.284 66.667 0.00 0.00 0.00 4.94
1336 1380 1.229209 TCACTCCTCCTCCCACACC 60.229 63.158 0.00 0.00 0.00 4.16
1337 1381 1.878656 CGTCACTCCTCCTCCCACAC 61.879 65.000 0.00 0.00 0.00 3.82
1338 1382 1.606601 CGTCACTCCTCCTCCCACA 60.607 63.158 0.00 0.00 0.00 4.17
1339 1383 1.304217 TCGTCACTCCTCCTCCCAC 60.304 63.158 0.00 0.00 0.00 4.61
1340 1384 1.000771 CTCGTCACTCCTCCTCCCA 60.001 63.158 0.00 0.00 0.00 4.37
1341 1385 2.419739 GCTCGTCACTCCTCCTCCC 61.420 68.421 0.00 0.00 0.00 4.30
1383 1427 4.147449 AGCTGCGCGTCCATGCTA 62.147 61.111 8.43 0.00 31.71 3.49
1599 1643 4.179599 GGGGGAGGAGGAGGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
1974 2039 5.276461 TCATGCACGGATTGAAGTAGTAT 57.724 39.130 0.00 0.00 0.00 2.12
1976 2041 3.610040 TCATGCACGGATTGAAGTAGT 57.390 42.857 0.00 0.00 0.00 2.73
1978 2043 3.123050 CGATCATGCACGGATTGAAGTA 58.877 45.455 10.59 0.00 0.00 2.24
1982 2047 1.665169 CAACGATCATGCACGGATTGA 59.335 47.619 19.38 6.89 31.78 2.57
1984 2049 1.016627 CCAACGATCATGCACGGATT 58.983 50.000 13.80 0.69 0.00 3.01
1992 2066 5.058149 TGGATTTTTGTCCAACGATCATG 57.942 39.130 0.00 0.00 45.03 3.07
2001 2075 3.072915 TCAGCTCTCTGGATTTTTGTCCA 59.927 43.478 0.00 0.00 45.78 4.02
2002 2076 3.438434 GTCAGCTCTCTGGATTTTTGTCC 59.562 47.826 0.00 0.00 40.69 4.02
2003 2077 4.067896 TGTCAGCTCTCTGGATTTTTGTC 58.932 43.478 0.00 0.00 40.69 3.18
2004 2078 4.090761 TGTCAGCTCTCTGGATTTTTGT 57.909 40.909 0.00 0.00 40.69 2.83
2006 2080 4.699257 GTCATGTCAGCTCTCTGGATTTTT 59.301 41.667 0.00 0.00 40.69 1.94
2007 2081 4.260170 GTCATGTCAGCTCTCTGGATTTT 58.740 43.478 0.00 0.00 40.69 1.82
2008 2082 3.262660 TGTCATGTCAGCTCTCTGGATTT 59.737 43.478 0.00 0.00 40.69 2.17
2009 2083 2.836372 TGTCATGTCAGCTCTCTGGATT 59.164 45.455 0.00 0.00 40.69 3.01
2011 2085 1.928868 TGTCATGTCAGCTCTCTGGA 58.071 50.000 0.00 0.00 40.69 3.86
2012 2086 2.552031 CATGTCATGTCAGCTCTCTGG 58.448 52.381 4.53 0.00 40.69 3.86
2013 2087 1.934525 GCATGTCATGTCAGCTCTCTG 59.065 52.381 14.26 0.00 41.67 3.35
2015 2089 1.664659 GTGCATGTCATGTCAGCTCTC 59.335 52.381 14.26 0.00 0.00 3.20
2016 2090 1.735386 GTGCATGTCATGTCAGCTCT 58.265 50.000 14.26 0.00 0.00 4.09
2017 2091 0.372679 CGTGCATGTCATGTCAGCTC 59.627 55.000 14.26 0.51 0.00 4.09
2019 2093 1.358877 TACGTGCATGTCATGTCAGC 58.641 50.000 16.44 0.45 43.50 4.26
2020 2094 2.931969 ACATACGTGCATGTCATGTCAG 59.068 45.455 16.44 12.31 43.50 3.51
2021 2095 2.672381 CACATACGTGCATGTCATGTCA 59.328 45.455 16.44 9.73 43.50 3.58
2022 2096 3.308820 CACATACGTGCATGTCATGTC 57.691 47.619 16.44 7.37 43.50 3.06
2050 2136 3.055819 TCACAAGCTTCCAGTGGAGTATC 60.056 47.826 12.67 3.16 34.17 2.24
2059 2145 2.671177 CGCCGTCACAAGCTTCCAG 61.671 63.158 0.00 0.00 0.00 3.86
2164 2250 4.067896 TGAAGTGGATTCAGAAAGAGTGC 58.932 43.478 0.00 0.00 43.09 4.40
2184 2374 8.265764 AGACTGTGATACATGTACTACTACTGA 58.734 37.037 7.96 0.00 0.00 3.41
2185 2375 8.439993 AGACTGTGATACATGTACTACTACTG 57.560 38.462 7.96 9.20 0.00 2.74
2189 2379 9.854668 ATTAGAGACTGTGATACATGTACTACT 57.145 33.333 7.96 1.49 0.00 2.57
2202 2396 9.043079 CGTACAGAGTTATATTAGAGACTGTGA 57.957 37.037 0.00 0.00 37.01 3.58
2203 2397 8.828644 ACGTACAGAGTTATATTAGAGACTGTG 58.171 37.037 0.00 0.00 38.79 3.66
2206 2400 9.190858 CGTACGTACAGAGTTATATTAGAGACT 57.809 37.037 24.50 0.00 0.00 3.24
2207 2401 8.973378 ACGTACGTACAGAGTTATATTAGAGAC 58.027 37.037 21.41 0.00 0.00 3.36
2208 2402 9.186323 GACGTACGTACAGAGTTATATTAGAGA 57.814 37.037 22.87 0.00 0.00 3.10
2209 2403 8.431593 GGACGTACGTACAGAGTTATATTAGAG 58.568 40.741 25.57 5.67 0.00 2.43
2210 2404 8.144478 AGGACGTACGTACAGAGTTATATTAGA 58.856 37.037 31.08 0.00 0.00 2.10
2211 2405 8.219769 CAGGACGTACGTACAGAGTTATATTAG 58.780 40.741 31.08 6.68 0.00 1.73
2212 2406 7.171508 CCAGGACGTACGTACAGAGTTATATTA 59.828 40.741 31.08 0.00 0.00 0.98
2214 2408 5.468072 CCAGGACGTACGTACAGAGTTATAT 59.532 44.000 31.08 5.38 0.00 0.86
2216 2410 3.624861 CCAGGACGTACGTACAGAGTTAT 59.375 47.826 31.08 6.94 0.00 1.89
2218 2412 1.808945 CCAGGACGTACGTACAGAGTT 59.191 52.381 31.08 8.50 0.00 3.01
2221 2415 2.408271 ATCCAGGACGTACGTACAGA 57.592 50.000 31.08 25.73 0.00 3.41
2222 2416 3.498927 AAATCCAGGACGTACGTACAG 57.501 47.619 31.08 23.48 0.00 2.74
2223 2417 3.005684 ACAAAATCCAGGACGTACGTACA 59.994 43.478 31.08 12.49 0.00 2.90
2224 2418 3.578688 ACAAAATCCAGGACGTACGTAC 58.421 45.455 23.27 23.27 0.00 3.67
2226 2420 2.825861 ACAAAATCCAGGACGTACGT 57.174 45.000 23.04 23.04 0.00 3.57
2227 2421 3.495377 TGAAACAAAATCCAGGACGTACG 59.505 43.478 15.01 15.01 0.00 3.67
2229 2423 4.069304 CCTGAAACAAAATCCAGGACGTA 58.931 43.478 0.00 0.00 46.84 3.57
2230 2424 2.884639 CCTGAAACAAAATCCAGGACGT 59.115 45.455 0.00 0.00 46.84 4.34
2232 2426 3.636764 ACACCTGAAACAAAATCCAGGAC 59.363 43.478 13.50 0.00 46.84 3.85
2233 2427 3.909732 ACACCTGAAACAAAATCCAGGA 58.090 40.909 13.50 0.00 46.84 3.86
2235 2429 4.805192 CACAACACCTGAAACAAAATCCAG 59.195 41.667 0.00 0.00 0.00 3.86
2236 2430 4.382470 CCACAACACCTGAAACAAAATCCA 60.382 41.667 0.00 0.00 0.00 3.41
2237 2431 4.119136 CCACAACACCTGAAACAAAATCC 58.881 43.478 0.00 0.00 0.00 3.01
2238 2432 4.566360 CACCACAACACCTGAAACAAAATC 59.434 41.667 0.00 0.00 0.00 2.17
2239 2433 4.502962 CACCACAACACCTGAAACAAAAT 58.497 39.130 0.00 0.00 0.00 1.82
2240 2434 3.306364 CCACCACAACACCTGAAACAAAA 60.306 43.478 0.00 0.00 0.00 2.44
2245 2439 1.040339 GCCCACCACAACACCTGAAA 61.040 55.000 0.00 0.00 0.00 2.69
2395 2589 4.365111 TGATGCCCTGCACCCACC 62.365 66.667 0.00 0.00 43.04 4.61
2465 2659 5.935206 TGGCATTCGACTGATTTAGTTTACA 59.065 36.000 6.99 0.00 40.53 2.41
2466 2660 6.417191 TGGCATTCGACTGATTTAGTTTAC 57.583 37.500 6.99 0.00 40.53 2.01
2467 2661 6.038161 CCATGGCATTCGACTGATTTAGTTTA 59.962 38.462 6.99 0.00 40.53 2.01
2482 2676 1.667724 CGACTGAGTTCCATGGCATTC 59.332 52.381 6.96 2.90 0.00 2.67
2483 2677 1.679944 CCGACTGAGTTCCATGGCATT 60.680 52.381 6.96 0.00 0.00 3.56
2547 2753 9.486497 CAGCAGAATACTGAATCACAAGTATAT 57.514 33.333 0.00 0.00 46.03 0.86
2548 2754 8.478066 ACAGCAGAATACTGAATCACAAGTATA 58.522 33.333 0.00 0.00 46.03 1.47
2549 2755 7.334090 ACAGCAGAATACTGAATCACAAGTAT 58.666 34.615 0.00 0.00 46.03 2.12
2551 2757 5.555017 ACAGCAGAATACTGAATCACAAGT 58.445 37.500 0.00 0.00 46.03 3.16
2573 2779 1.193426 GAGCTCGTTCAGTTCAGCAAC 59.807 52.381 0.00 0.00 32.60 4.17
2577 2783 1.000283 ACCAGAGCTCGTTCAGTTCAG 60.000 52.381 8.37 0.00 34.79 3.02
2582 2788 0.108898 CCAGACCAGAGCTCGTTCAG 60.109 60.000 8.37 3.13 0.00 3.02
2583 2789 0.827925 ACCAGACCAGAGCTCGTTCA 60.828 55.000 8.37 0.00 0.00 3.18
2590 2796 0.177604 CATCCAGACCAGACCAGAGC 59.822 60.000 0.00 0.00 0.00 4.09
2593 2799 1.153489 CGCATCCAGACCAGACCAG 60.153 63.158 0.00 0.00 0.00 4.00
2597 2803 1.341089 ACTAGTCGCATCCAGACCAGA 60.341 52.381 0.00 0.00 39.31 3.86
2598 2804 1.107114 ACTAGTCGCATCCAGACCAG 58.893 55.000 0.00 0.00 39.31 4.00
2600 2806 0.818296 ACACTAGTCGCATCCAGACC 59.182 55.000 0.00 0.00 39.31 3.85
2602 2808 2.164422 CAGAACACTAGTCGCATCCAGA 59.836 50.000 0.00 0.00 0.00 3.86
2605 2811 2.094700 TCACAGAACACTAGTCGCATCC 60.095 50.000 0.00 0.00 0.00 3.51
2607 2813 3.579709 CTTCACAGAACACTAGTCGCAT 58.420 45.455 0.00 0.00 0.00 4.73
2608 2814 2.288213 CCTTCACAGAACACTAGTCGCA 60.288 50.000 0.00 0.00 0.00 5.10
2610 2816 2.329379 GCCTTCACAGAACACTAGTCG 58.671 52.381 0.00 0.00 0.00 4.18
2611 2817 2.037251 TGGCCTTCACAGAACACTAGTC 59.963 50.000 3.32 0.00 0.00 2.59
2616 2822 0.531974 TCGTGGCCTTCACAGAACAC 60.532 55.000 3.32 0.00 46.36 3.32
2628 2834 4.851179 GTCGGGGGATTCGTGGCC 62.851 72.222 0.00 0.00 0.00 5.36
2654 2864 2.581216 TCCCCGGCTATACTAGACAG 57.419 55.000 0.00 0.00 31.54 3.51
2658 2868 1.558233 CCCTTCCCCGGCTATACTAG 58.442 60.000 0.00 0.00 0.00 2.57
2668 2878 3.787001 GGAGAGTGCCCTTCCCCG 61.787 72.222 0.00 0.00 0.00 5.73
2673 2883 1.439543 AAACAGAGGAGAGTGCCCTT 58.560 50.000 0.00 0.00 33.36 3.95
2679 2889 2.640332 GGAGGGAAAAACAGAGGAGAGT 59.360 50.000 0.00 0.00 0.00 3.24
2694 2904 2.610859 GCTGGGACTTGGGAGGGA 60.611 66.667 0.00 0.00 0.00 4.20
2695 2905 2.538141 TTGCTGGGACTTGGGAGGG 61.538 63.158 0.00 0.00 0.00 4.30
2696 2906 1.303643 GTTGCTGGGACTTGGGAGG 60.304 63.158 0.00 0.00 0.00 4.30
2697 2907 1.672356 CGTTGCTGGGACTTGGGAG 60.672 63.158 0.00 0.00 0.00 4.30
2698 2908 2.111999 CTCGTTGCTGGGACTTGGGA 62.112 60.000 0.00 0.00 0.00 4.37
2772 2982 4.507916 CGCGGAGGAGGGAGAGGA 62.508 72.222 0.00 0.00 0.00 3.71
2823 3039 3.405823 AACAAATTGCAATGGGACTGG 57.594 42.857 13.82 0.00 0.00 4.00
2824 3040 3.747529 GGAAACAAATTGCAATGGGACTG 59.252 43.478 13.82 8.21 0.00 3.51
2825 3041 3.647590 AGGAAACAAATTGCAATGGGACT 59.352 39.130 13.82 2.81 0.00 3.85
2826 3042 4.006780 AGGAAACAAATTGCAATGGGAC 57.993 40.909 13.82 3.19 0.00 4.46
2827 3043 4.837860 AGTAGGAAACAAATTGCAATGGGA 59.162 37.500 13.82 0.00 0.00 4.37
2828 3044 5.151297 AGTAGGAAACAAATTGCAATGGG 57.849 39.130 13.82 10.71 0.00 4.00
2829 3045 5.170748 GGAGTAGGAAACAAATTGCAATGG 58.829 41.667 13.82 11.09 0.00 3.16
2830 3046 4.858692 CGGAGTAGGAAACAAATTGCAATG 59.141 41.667 13.82 5.51 0.00 2.82
2831 3047 4.522789 ACGGAGTAGGAAACAAATTGCAAT 59.477 37.500 5.99 5.99 41.94 3.56
2832 3048 3.886505 ACGGAGTAGGAAACAAATTGCAA 59.113 39.130 0.00 0.00 41.94 4.08
2833 3049 3.482436 ACGGAGTAGGAAACAAATTGCA 58.518 40.909 0.00 0.00 41.94 4.08
2843 3059 8.102047 CTATTCTAATAGGAGACGGAGTAGGAA 58.898 40.741 2.34 0.00 36.69 3.36
2844 3060 7.457218 TCTATTCTAATAGGAGACGGAGTAGGA 59.543 40.741 9.32 0.00 39.24 2.94
2845 3061 7.622713 TCTATTCTAATAGGAGACGGAGTAGG 58.377 42.308 9.32 0.00 39.24 3.18
2846 3062 9.504708 TTTCTATTCTAATAGGAGACGGAGTAG 57.495 37.037 9.32 0.00 39.24 2.57
2847 3063 9.857656 TTTTCTATTCTAATAGGAGACGGAGTA 57.142 33.333 9.32 0.00 39.24 2.59
2848 3064 8.763984 TTTTCTATTCTAATAGGAGACGGAGT 57.236 34.615 9.32 0.00 40.79 3.85
2850 3066 9.589461 AGATTTTCTATTCTAATAGGAGACGGA 57.411 33.333 9.32 0.00 39.06 4.69
2851 3067 9.849166 GAGATTTTCTATTCTAATAGGAGACGG 57.151 37.037 9.32 0.00 39.06 4.79
2869 3085 8.312524 GTCGTTCTCGTGTTTATAGAGATTTTC 58.687 37.037 0.00 0.00 40.26 2.29
2870 3086 7.811236 TGTCGTTCTCGTGTTTATAGAGATTTT 59.189 33.333 0.00 0.00 40.26 1.82
2872 3088 6.849502 TGTCGTTCTCGTGTTTATAGAGATT 58.150 36.000 0.00 0.00 40.26 2.40
2873 3089 6.432607 TGTCGTTCTCGTGTTTATAGAGAT 57.567 37.500 0.00 0.00 40.26 2.75
2874 3090 5.868043 TGTCGTTCTCGTGTTTATAGAGA 57.132 39.130 0.00 0.00 39.03 3.10
2877 3093 4.026804 GCCATGTCGTTCTCGTGTTTATAG 60.027 45.833 0.00 0.00 38.33 1.31
2879 3095 2.671396 GCCATGTCGTTCTCGTGTTTAT 59.329 45.455 0.00 0.00 38.33 1.40
2891 3152 1.436336 GCTACGGTAGCCATGTCGT 59.564 57.895 25.98 0.00 45.95 4.34
2892 3153 4.320971 GCTACGGTAGCCATGTCG 57.679 61.111 25.98 0.00 45.95 4.35
2900 3161 1.332997 AGAACGATTCGGCTACGGTAG 59.667 52.381 11.29 10.83 41.39 3.18
2901 3162 1.382522 AGAACGATTCGGCTACGGTA 58.617 50.000 11.29 0.00 41.39 4.02
2902 3163 1.064654 GTAGAACGATTCGGCTACGGT 59.935 52.381 18.80 0.00 41.39 4.83
2903 3164 1.332997 AGTAGAACGATTCGGCTACGG 59.667 52.381 23.42 0.00 40.74 4.02
2904 3165 2.287373 AGAGTAGAACGATTCGGCTACG 59.713 50.000 23.42 0.00 40.74 3.51
2906 3167 3.812053 GGTAGAGTAGAACGATTCGGCTA 59.188 47.826 11.29 8.67 34.02 3.93
2908 3169 2.601741 CGGTAGAGTAGAACGATTCGGC 60.602 54.545 11.29 2.09 34.02 5.54
2910 3171 2.287373 AGCGGTAGAGTAGAACGATTCG 59.713 50.000 4.14 4.14 34.02 3.34
2916 3177 1.601430 CCGGTAGCGGTAGAGTAGAAC 59.399 57.143 24.98 0.00 0.00 3.01
2920 3181 3.403038 GATTACCGGTAGCGGTAGAGTA 58.597 50.000 36.26 26.27 44.16 2.59
2921 3182 2.225467 GATTACCGGTAGCGGTAGAGT 58.775 52.381 36.26 27.99 44.16 3.24
2922 3183 1.538950 GGATTACCGGTAGCGGTAGAG 59.461 57.143 36.26 14.88 44.16 2.43
2926 3187 2.136229 GGGGATTACCGGTAGCGGT 61.136 63.158 37.78 37.78 45.24 5.68
2928 3189 2.739132 GGGGGATTACCGGTAGCG 59.261 66.667 15.20 7.49 41.60 4.26
2936 3197 1.402107 TTAGGACGCCGGGGGATTAC 61.402 60.000 23.83 2.16 0.00 1.89
2938 3199 0.472352 TATTAGGACGCCGGGGGATT 60.472 55.000 23.83 9.62 0.00 3.01
2939 3200 1.156803 TATTAGGACGCCGGGGGAT 59.843 57.895 23.83 10.36 0.00 3.85
2940 3201 1.833934 GTATTAGGACGCCGGGGGA 60.834 63.158 23.83 1.87 0.00 4.81
2972 3272 0.611896 TAGCAAGCAGAAAAGGGGGC 60.612 55.000 0.00 0.00 0.00 5.80
2974 3274 1.272147 ACCTAGCAAGCAGAAAAGGGG 60.272 52.381 0.00 0.00 0.00 4.79
2975 3275 2.206576 ACCTAGCAAGCAGAAAAGGG 57.793 50.000 0.00 0.00 0.00 3.95
2976 3276 5.302357 CTAAACCTAGCAAGCAGAAAAGG 57.698 43.478 0.00 0.00 0.00 3.11
3001 3301 4.416738 GGGGCCTTCGAGCAAGCT 62.417 66.667 0.84 0.00 0.00 3.74
3046 3352 3.067742 TCGTATTAGTACCTGAAGGCAGC 59.932 47.826 0.00 0.00 40.91 5.25
3047 3353 4.913335 TCGTATTAGTACCTGAAGGCAG 57.087 45.455 0.00 0.00 41.93 4.85
3048 3354 5.597182 AGAATCGTATTAGTACCTGAAGGCA 59.403 40.000 0.00 0.00 39.32 4.75
3049 3355 6.086785 AGAATCGTATTAGTACCTGAAGGC 57.913 41.667 0.00 0.00 39.32 4.35
3067 3373 4.208873 CACAGAAGCTTAGCATCGAGAATC 59.791 45.833 7.07 0.00 31.18 2.52
3068 3374 4.118410 CACAGAAGCTTAGCATCGAGAAT 58.882 43.478 7.07 0.00 31.18 2.40
3069 3375 3.193479 TCACAGAAGCTTAGCATCGAGAA 59.807 43.478 7.07 0.00 31.18 2.87
3071 3377 3.114809 CTCACAGAAGCTTAGCATCGAG 58.885 50.000 7.07 5.25 31.18 4.04
3073 3379 3.156511 TCTCACAGAAGCTTAGCATCG 57.843 47.619 7.07 3.54 31.18 3.84
3074 3380 6.315891 AGAAAATCTCACAGAAGCTTAGCATC 59.684 38.462 7.07 3.74 0.00 3.91
3075 3381 6.179040 AGAAAATCTCACAGAAGCTTAGCAT 58.821 36.000 7.07 0.00 0.00 3.79
3076 3382 5.555017 AGAAAATCTCACAGAAGCTTAGCA 58.445 37.500 7.07 0.00 0.00 3.49
3077 3383 6.493449 AAGAAAATCTCACAGAAGCTTAGC 57.507 37.500 0.00 0.00 0.00 3.09
3078 3384 7.361628 GGGAAAGAAAATCTCACAGAAGCTTAG 60.362 40.741 0.00 0.00 0.00 2.18
3079 3385 6.431234 GGGAAAGAAAATCTCACAGAAGCTTA 59.569 38.462 0.00 0.00 0.00 3.09
3092 3398 5.869344 GCCATAACACAAGGGAAAGAAAATC 59.131 40.000 0.00 0.00 0.00 2.17
3093 3399 5.543790 AGCCATAACACAAGGGAAAGAAAAT 59.456 36.000 0.00 0.00 0.00 1.82
3095 3470 4.479158 AGCCATAACACAAGGGAAAGAAA 58.521 39.130 0.00 0.00 0.00 2.52
3101 3476 2.969821 ACAAGCCATAACACAAGGGA 57.030 45.000 0.00 0.00 0.00 4.20
3105 3480 5.935206 TCTCGATTAACAAGCCATAACACAA 59.065 36.000 0.00 0.00 0.00 3.33
3106 3481 5.483811 TCTCGATTAACAAGCCATAACACA 58.516 37.500 0.00 0.00 0.00 3.72
3107 3482 5.006746 CCTCTCGATTAACAAGCCATAACAC 59.993 44.000 0.00 0.00 0.00 3.32
3108 3483 5.105106 TCCTCTCGATTAACAAGCCATAACA 60.105 40.000 0.00 0.00 0.00 2.41
3109 3484 5.357257 TCCTCTCGATTAACAAGCCATAAC 58.643 41.667 0.00 0.00 0.00 1.89
3112 3487 4.487714 TTCCTCTCGATTAACAAGCCAT 57.512 40.909 0.00 0.00 0.00 4.40
3121 3496 5.692928 ACCTAGCTACTTTCCTCTCGATTA 58.307 41.667 0.00 0.00 0.00 1.75
3122 3497 4.538738 ACCTAGCTACTTTCCTCTCGATT 58.461 43.478 0.00 0.00 0.00 3.34
3123 3498 4.173290 ACCTAGCTACTTTCCTCTCGAT 57.827 45.455 0.00 0.00 0.00 3.59
3124 3499 3.648507 ACCTAGCTACTTTCCTCTCGA 57.351 47.619 0.00 0.00 0.00 4.04
3125 3500 4.158025 TGAAACCTAGCTACTTTCCTCTCG 59.842 45.833 13.22 0.00 0.00 4.04
3126 3501 5.656480 CTGAAACCTAGCTACTTTCCTCTC 58.344 45.833 13.22 0.00 0.00 3.20
3127 3502 4.081365 GCTGAAACCTAGCTACTTTCCTCT 60.081 45.833 13.22 0.00 38.14 3.69
3128 3503 4.185394 GCTGAAACCTAGCTACTTTCCTC 58.815 47.826 13.22 5.17 38.14 3.71
3129 3504 4.209307 GCTGAAACCTAGCTACTTTCCT 57.791 45.455 13.22 0.00 38.14 3.36
3138 3513 1.799383 GCAGCAGCTGAAACCTAGC 59.201 57.895 27.39 3.74 41.43 3.42
3139 3514 2.084844 CGCAGCAGCTGAAACCTAG 58.915 57.895 27.39 3.68 39.10 3.02
3140 3515 4.284123 CGCAGCAGCTGAAACCTA 57.716 55.556 27.39 0.00 39.10 3.08
3153 3528 2.244669 CGATTGCATCTCGCGCAG 59.755 61.111 8.75 4.17 46.97 5.18
3154 3529 3.264159 CCGATTGCATCTCGCGCA 61.264 61.111 8.75 0.00 46.97 6.09
3155 3530 4.656558 GCCGATTGCATCTCGCGC 62.657 66.667 0.00 12.71 46.97 6.86
3164 3539 1.742831 TGTAACATTCCTGCCGATTGC 59.257 47.619 0.00 0.00 41.77 3.56
3165 3540 3.427503 GGTTGTAACATTCCTGCCGATTG 60.428 47.826 0.00 0.00 0.00 2.67
3166 3541 2.752903 GGTTGTAACATTCCTGCCGATT 59.247 45.455 0.00 0.00 0.00 3.34
3167 3542 2.026262 AGGTTGTAACATTCCTGCCGAT 60.026 45.455 0.00 0.00 0.00 4.18
3168 3543 1.349688 AGGTTGTAACATTCCTGCCGA 59.650 47.619 0.00 0.00 0.00 5.54
3169 3544 1.821216 AGGTTGTAACATTCCTGCCG 58.179 50.000 0.00 0.00 0.00 5.69
3170 3545 3.056821 GGAAAGGTTGTAACATTCCTGCC 60.057 47.826 17.37 8.89 40.44 4.85
3171 3546 3.056821 GGGAAAGGTTGTAACATTCCTGC 60.057 47.826 20.95 9.71 41.92 4.85
3172 3547 3.509967 GGGGAAAGGTTGTAACATTCCTG 59.490 47.826 20.95 0.00 41.92 3.86
3173 3548 3.401342 AGGGGAAAGGTTGTAACATTCCT 59.599 43.478 20.95 11.04 41.92 3.36
3174 3549 3.774734 AGGGGAAAGGTTGTAACATTCC 58.225 45.455 16.80 16.80 41.71 3.01
3175 3550 4.219944 GGAAGGGGAAAGGTTGTAACATTC 59.780 45.833 0.00 0.68 30.85 2.67
3176 3551 4.157246 GGAAGGGGAAAGGTTGTAACATT 58.843 43.478 0.00 0.00 33.91 2.71
3177 3552 3.501568 GGGAAGGGGAAAGGTTGTAACAT 60.502 47.826 0.00 0.00 0.00 2.71
3178 3553 2.158430 GGGAAGGGGAAAGGTTGTAACA 60.158 50.000 0.00 0.00 0.00 2.41
3179 3554 2.109480 AGGGAAGGGGAAAGGTTGTAAC 59.891 50.000 0.00 0.00 0.00 2.50
3180 3555 2.435104 AGGGAAGGGGAAAGGTTGTAA 58.565 47.619 0.00 0.00 0.00 2.41
3181 3556 2.143231 AGGGAAGGGGAAAGGTTGTA 57.857 50.000 0.00 0.00 0.00 2.41
3182 3557 1.241485 AAGGGAAGGGGAAAGGTTGT 58.759 50.000 0.00 0.00 0.00 3.32
3183 3558 1.970640 CAAAGGGAAGGGGAAAGGTTG 59.029 52.381 0.00 0.00 0.00 3.77
3184 3559 1.132849 CCAAAGGGAAGGGGAAAGGTT 60.133 52.381 0.00 0.00 35.59 3.50
3185 3560 0.487325 CCAAAGGGAAGGGGAAAGGT 59.513 55.000 0.00 0.00 35.59 3.50
3186 3561 3.381388 CCAAAGGGAAGGGGAAAGG 57.619 57.895 0.00 0.00 35.59 3.11
3198 3573 6.755542 ATCTAATCTAAGAGACCCCAAAGG 57.244 41.667 0.00 0.00 43.78 3.11
3199 3574 8.490311 AGAAATCTAATCTAAGAGACCCCAAAG 58.510 37.037 0.00 0.00 0.00 2.77
3200 3575 8.393959 AGAAATCTAATCTAAGAGACCCCAAA 57.606 34.615 0.00 0.00 0.00 3.28
3201 3576 7.201920 CGAGAAATCTAATCTAAGAGACCCCAA 60.202 40.741 0.00 0.00 0.00 4.12
3202 3577 6.265649 CGAGAAATCTAATCTAAGAGACCCCA 59.734 42.308 0.00 0.00 0.00 4.96
3203 3578 6.490721 TCGAGAAATCTAATCTAAGAGACCCC 59.509 42.308 0.00 0.00 0.00 4.95
3204 3579 7.364970 GTCGAGAAATCTAATCTAAGAGACCC 58.635 42.308 0.00 0.00 0.00 4.46
3205 3580 7.013464 TGGTCGAGAAATCTAATCTAAGAGACC 59.987 40.741 0.00 0.00 37.57 3.85
3206 3581 7.932335 TGGTCGAGAAATCTAATCTAAGAGAC 58.068 38.462 0.00 0.00 0.00 3.36
3207 3582 7.993758 TCTGGTCGAGAAATCTAATCTAAGAGA 59.006 37.037 0.00 0.00 0.00 3.10
3208 3583 8.160521 TCTGGTCGAGAAATCTAATCTAAGAG 57.839 38.462 0.00 0.00 0.00 2.85
3209 3584 8.521170 TTCTGGTCGAGAAATCTAATCTAAGA 57.479 34.615 0.00 0.00 37.78 2.10
3222 3597 3.067106 GCAGTCAATTTCTGGTCGAGAA 58.933 45.455 8.78 0.00 39.05 2.87
3223 3598 2.612972 GGCAGTCAATTTCTGGTCGAGA 60.613 50.000 8.78 0.00 33.98 4.04
3224 3599 1.734465 GGCAGTCAATTTCTGGTCGAG 59.266 52.381 8.78 0.00 33.98 4.04
3225 3600 1.071542 TGGCAGTCAATTTCTGGTCGA 59.928 47.619 8.78 0.00 33.98 4.20
3226 3601 1.466167 CTGGCAGTCAATTTCTGGTCG 59.534 52.381 6.28 0.00 33.98 4.79
3227 3602 1.815003 CCTGGCAGTCAATTTCTGGTC 59.185 52.381 14.43 0.00 33.98 4.02
3228 3603 1.425066 TCCTGGCAGTCAATTTCTGGT 59.575 47.619 14.43 0.00 33.98 4.00
3229 3604 2.205022 TCCTGGCAGTCAATTTCTGG 57.795 50.000 14.43 0.00 33.98 3.86
3230 3605 3.349927 TCATCCTGGCAGTCAATTTCTG 58.650 45.455 14.43 3.76 36.18 3.02
3231 3606 3.726557 TCATCCTGGCAGTCAATTTCT 57.273 42.857 14.43 0.00 0.00 2.52
3232 3607 4.996788 ATTCATCCTGGCAGTCAATTTC 57.003 40.909 14.43 0.00 0.00 2.17
3233 3608 5.750352 AAATTCATCCTGGCAGTCAATTT 57.250 34.783 14.43 13.59 0.00 1.82
3234 3609 6.855763 TTAAATTCATCCTGGCAGTCAATT 57.144 33.333 14.43 8.71 0.00 2.32
3235 3610 7.427989 AATTAAATTCATCCTGGCAGTCAAT 57.572 32.000 14.43 1.03 0.00 2.57
3236 3611 6.855763 AATTAAATTCATCCTGGCAGTCAA 57.144 33.333 14.43 0.00 0.00 3.18
3237 3612 6.404623 CGAAATTAAATTCATCCTGGCAGTCA 60.405 38.462 14.43 0.00 0.00 3.41
3238 3613 5.973565 CGAAATTAAATTCATCCTGGCAGTC 59.026 40.000 14.43 0.00 0.00 3.51
3239 3614 5.163519 CCGAAATTAAATTCATCCTGGCAGT 60.164 40.000 14.43 0.00 0.00 4.40
3240 3615 5.163519 ACCGAAATTAAATTCATCCTGGCAG 60.164 40.000 7.75 7.75 0.00 4.85
3241 3616 4.709397 ACCGAAATTAAATTCATCCTGGCA 59.291 37.500 4.24 0.00 0.00 4.92
3242 3617 5.262588 ACCGAAATTAAATTCATCCTGGC 57.737 39.130 4.24 0.00 0.00 4.85
3243 3618 5.359576 TGGACCGAAATTAAATTCATCCTGG 59.640 40.000 18.00 8.18 36.16 4.45
3244 3619 6.449635 TGGACCGAAATTAAATTCATCCTG 57.550 37.500 18.00 0.00 36.16 3.86
3245 3620 6.833416 TCATGGACCGAAATTAAATTCATCCT 59.167 34.615 18.00 7.10 36.16 3.24
3246 3621 7.038154 TCATGGACCGAAATTAAATTCATCC 57.962 36.000 13.29 13.29 35.91 3.51
3247 3622 9.533253 AATTCATGGACCGAAATTAAATTCATC 57.467 29.630 4.24 1.05 0.00 2.92
3248 3623 9.533253 GAATTCATGGACCGAAATTAAATTCAT 57.467 29.630 0.00 0.00 33.16 2.57
3249 3624 8.526978 TGAATTCATGGACCGAAATTAAATTCA 58.473 29.630 3.38 0.00 37.92 2.57
3250 3625 8.925161 TGAATTCATGGACCGAAATTAAATTC 57.075 30.769 3.38 0.00 33.41 2.17
3251 3626 8.531146 ACTGAATTCATGGACCGAAATTAAATT 58.469 29.630 8.96 0.00 0.00 1.82
3252 3627 7.975616 CACTGAATTCATGGACCGAAATTAAAT 59.024 33.333 8.96 0.00 0.00 1.40
3253 3628 7.040062 ACACTGAATTCATGGACCGAAATTAAA 60.040 33.333 8.96 0.00 0.00 1.52
3254 3629 6.432783 ACACTGAATTCATGGACCGAAATTAA 59.567 34.615 8.96 0.00 0.00 1.40
3255 3630 5.943416 ACACTGAATTCATGGACCGAAATTA 59.057 36.000 8.96 0.00 0.00 1.40
3256 3631 4.766891 ACACTGAATTCATGGACCGAAATT 59.233 37.500 8.96 0.00 0.00 1.82
3257 3632 4.335416 ACACTGAATTCATGGACCGAAAT 58.665 39.130 8.96 0.00 0.00 2.17
3258 3633 3.750371 ACACTGAATTCATGGACCGAAA 58.250 40.909 8.96 0.00 0.00 3.46
3259 3634 3.417069 ACACTGAATTCATGGACCGAA 57.583 42.857 8.96 0.00 0.00 4.30
3260 3635 3.417069 AACACTGAATTCATGGACCGA 57.583 42.857 8.96 0.00 0.00 4.69
3261 3636 4.454161 TGTTAACACTGAATTCATGGACCG 59.546 41.667 8.96 0.00 0.00 4.79
3262 3637 5.957842 TGTTAACACTGAATTCATGGACC 57.042 39.130 8.96 0.00 0.00 4.46
3263 3638 7.336931 AGGTATGTTAACACTGAATTCATGGAC 59.663 37.037 11.22 10.09 0.00 4.02
3264 3639 7.402054 AGGTATGTTAACACTGAATTCATGGA 58.598 34.615 11.22 0.70 0.00 3.41
3265 3640 7.630242 AGGTATGTTAACACTGAATTCATGG 57.370 36.000 11.22 6.77 0.00 3.66
3266 3641 9.383519 ACTAGGTATGTTAACACTGAATTCATG 57.616 33.333 11.22 11.64 0.00 3.07
3267 3642 9.959721 AACTAGGTATGTTAACACTGAATTCAT 57.040 29.630 11.22 0.00 0.00 2.57
3270 3645 9.662947 GGTAACTAGGTATGTTAACACTGAATT 57.337 33.333 11.22 2.92 37.49 2.17
3271 3646 8.262933 GGGTAACTAGGTATGTTAACACTGAAT 58.737 37.037 11.22 0.00 38.82 2.57
3290 3665 2.225445 TGTACTGGCCTACTGGGTAACT 60.225 50.000 3.32 0.00 37.43 2.24
3293 3668 1.360162 ACTGTACTGGCCTACTGGGTA 59.640 52.381 3.32 0.00 37.43 3.69
3294 3669 0.116541 ACTGTACTGGCCTACTGGGT 59.883 55.000 3.32 0.00 37.43 4.51
3296 3671 2.165845 GTGTACTGTACTGGCCTACTGG 59.834 54.545 17.98 0.00 0.00 4.00
3297 3672 3.090037 AGTGTACTGTACTGGCCTACTG 58.910 50.000 17.98 5.89 0.00 2.74
3298 3673 3.090037 CAGTGTACTGTACTGGCCTACT 58.910 50.000 17.98 9.48 41.36 2.57
3299 3674 3.505464 CAGTGTACTGTACTGGCCTAC 57.495 52.381 17.98 7.48 41.36 3.18
3329 3704 2.642154 TTGTACCGCTCCCTCAAAAA 57.358 45.000 0.00 0.00 0.00 1.94
3330 3705 2.224670 ACATTGTACCGCTCCCTCAAAA 60.225 45.455 0.00 0.00 0.00 2.44
3331 3706 1.349688 ACATTGTACCGCTCCCTCAAA 59.650 47.619 0.00 0.00 0.00 2.69
3332 3707 0.981183 ACATTGTACCGCTCCCTCAA 59.019 50.000 0.00 0.00 0.00 3.02
3333 3708 0.981183 AACATTGTACCGCTCCCTCA 59.019 50.000 0.00 0.00 0.00 3.86
3334 3709 1.066430 TGAACATTGTACCGCTCCCTC 60.066 52.381 0.00 0.00 0.00 4.30
3335 3710 0.981183 TGAACATTGTACCGCTCCCT 59.019 50.000 0.00 0.00 0.00 4.20
3336 3711 2.038387 ATGAACATTGTACCGCTCCC 57.962 50.000 0.00 0.00 0.00 4.30
3337 3712 4.127171 ACATATGAACATTGTACCGCTCC 58.873 43.478 10.38 0.00 0.00 4.70
3338 3713 5.734855 AACATATGAACATTGTACCGCTC 57.265 39.130 10.38 0.00 0.00 5.03
3339 3714 6.257849 CACTAACATATGAACATTGTACCGCT 59.742 38.462 10.38 0.00 0.00 5.52
3340 3715 6.418956 CACTAACATATGAACATTGTACCGC 58.581 40.000 10.38 0.00 0.00 5.68
3347 3722 8.340618 AGTCAAAGCACTAACATATGAACATT 57.659 30.769 10.38 0.00 0.00 2.71
3353 3728 5.941733 TGCAAGTCAAAGCACTAACATATG 58.058 37.500 0.00 0.00 35.51 1.78
3359 3734 2.158682 TCCCTGCAAGTCAAAGCACTAA 60.159 45.455 0.00 0.00 36.62 2.24
3360 3735 1.419762 TCCCTGCAAGTCAAAGCACTA 59.580 47.619 0.00 0.00 36.62 2.74
3361 3736 0.183492 TCCCTGCAAGTCAAAGCACT 59.817 50.000 0.00 0.00 36.62 4.40
3403 3778 0.107312 CTGTTCCATGGCAGAGGAGG 60.107 60.000 12.69 0.00 34.91 4.30
3404 3779 0.107312 CCTGTTCCATGGCAGAGGAG 60.107 60.000 21.16 4.22 34.91 3.69
3405 3780 1.565390 CCCTGTTCCATGGCAGAGGA 61.565 60.000 26.28 7.32 34.87 3.71
3412 3787 2.043652 CCTGCCCCTGTTCCATGG 60.044 66.667 4.97 4.97 0.00 3.66
3421 3796 1.541368 TTTGTAGCTCCCTGCCCCT 60.541 57.895 0.00 0.00 44.23 4.79
3423 3798 0.251165 TTGTTTGTAGCTCCCTGCCC 60.251 55.000 0.00 0.00 44.23 5.36
3424 3799 1.474077 CATTGTTTGTAGCTCCCTGCC 59.526 52.381 0.00 0.00 44.23 4.85
3435 3810 0.101399 TGTTTCGGCGCATTGTTTGT 59.899 45.000 10.83 0.00 0.00 2.83
3440 3815 1.013596 TCCTATGTTTCGGCGCATTG 58.986 50.000 10.83 1.07 0.00 2.82
3447 3822 6.314784 GTGAATCTGTTTTCCTATGTTTCGG 58.685 40.000 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.