Multiple sequence alignment - TraesCS3A01G154600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G154600 chr3A 100.000 3390 0 0 1 3390 146396849 146393460 0.000000e+00 6261.0
1 TraesCS3A01G154600 chr3A 90.000 130 11 2 531 660 697472321 697472448 2.090000e-37 167.0
2 TraesCS3A01G154600 chr3B 94.133 2727 82 38 689 3390 189159815 189157142 0.000000e+00 4078.0
3 TraesCS3A01G154600 chr3B 96.396 111 4 0 550 660 452977086 452976976 2.080000e-42 183.0
4 TraesCS3A01G154600 chr3D 95.415 1592 29 16 844 2425 132608249 132606692 0.000000e+00 2495.0
5 TraesCS3A01G154600 chr3D 96.720 945 27 2 2450 3390 132606700 132605756 0.000000e+00 1570.0
6 TraesCS3A01G154600 chr3D 88.571 280 29 3 1 279 158536362 158536085 1.510000e-88 337.0
7 TraesCS3A01G154600 chr3D 94.805 154 5 3 690 843 132608538 132608388 1.570000e-58 237.0
8 TraesCS3A01G154600 chr3D 91.892 148 10 2 410 555 132608885 132608738 4.430000e-49 206.0
9 TraesCS3A01G154600 chr3D 86.923 130 17 0 281 410 132643607 132643478 2.730000e-31 147.0
10 TraesCS3A01G154600 chr7D 89.753 283 27 2 1 282 267247614 267247895 8.940000e-96 361.0
11 TraesCS3A01G154600 chr7D 88.693 283 27 4 1 281 260988644 260988365 1.160000e-89 340.0
12 TraesCS3A01G154600 chr7D 94.318 88 5 0 1044 1131 148148069 148148156 5.900000e-28 135.0
13 TraesCS3A01G154600 chr7D 81.579 152 21 6 410 555 552154779 552154629 5.940000e-23 119.0
14 TraesCS3A01G154600 chr5D 89.362 282 29 1 1 281 278150185 278150466 1.500000e-93 353.0
15 TraesCS3A01G154600 chr5D 88.380 284 26 6 1 281 312611439 312611160 5.420000e-88 335.0
16 TraesCS3A01G154600 chr7B 88.811 286 27 3 1 281 454721389 454721104 2.500000e-91 346.0
17 TraesCS3A01G154600 chr7B 88.339 283 31 2 1 281 63655267 63654985 4.190000e-89 339.0
18 TraesCS3A01G154600 chr7B 92.941 85 6 0 1044 1128 111312961 111313045 1.280000e-24 124.0
19 TraesCS3A01G154600 chr6B 88.772 285 26 4 1 281 261587978 261587696 9.010000e-91 344.0
20 TraesCS3A01G154600 chr6B 94.118 68 4 0 1044 1111 595226698 595226765 1.660000e-18 104.0
21 TraesCS3A01G154600 chr5B 88.462 286 26 4 1 281 639013425 639013142 4.190000e-89 339.0
22 TraesCS3A01G154600 chr5B 96.396 111 4 0 553 663 36727663 36727553 2.080000e-42 183.0
23 TraesCS3A01G154600 chr1A 75.670 522 86 30 1037 1546 521331960 521332452 4.400000e-54 222.0
24 TraesCS3A01G154600 chr1A 94.828 116 6 0 546 661 384334441 384334556 7.470000e-42 182.0
25 TraesCS3A01G154600 chr1A 91.935 124 10 0 537 660 362406257 362406380 1.250000e-39 174.0
26 TraesCS3A01G154600 chr2B 95.798 119 4 1 543 660 213374636 213374518 1.240000e-44 191.0
27 TraesCS3A01G154600 chr2B 96.429 112 4 0 549 660 76928416 76928527 5.780000e-43 185.0
28 TraesCS3A01G154600 chr1D 94.828 116 6 0 545 660 459859154 459859039 7.470000e-42 182.0
29 TraesCS3A01G154600 chr1D 85.271 129 16 3 1037 1163 426404860 426404987 2.750000e-26 130.0
30 TraesCS3A01G154600 chr5A 94.017 117 7 0 546 662 260334273 260334157 9.670000e-41 178.0
31 TraesCS3A01G154600 chr6D 90.351 114 9 2 1044 1156 398178700 398178812 7.580000e-32 148.0
32 TraesCS3A01G154600 chr6D 83.099 71 7 3 476 546 320686466 320686401 3.650000e-05 60.2
33 TraesCS3A01G154600 chr7A 88.235 119 11 3 1044 1161 149303043 149303159 4.560000e-29 139.0
34 TraesCS3A01G154600 chr6A 92.784 97 6 1 1044 1140 544174184 544174279 4.560000e-29 139.0
35 TraesCS3A01G154600 chr2D 82.781 151 21 4 410 555 134651038 134650888 2.750000e-26 130.0
36 TraesCS3A01G154600 chr1B 83.969 131 17 4 1037 1166 575923503 575923630 4.590000e-24 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G154600 chr3A 146393460 146396849 3389 True 6261 6261 100.000 1 3390 1 chr3A.!!$R1 3389
1 TraesCS3A01G154600 chr3B 189157142 189159815 2673 True 4078 4078 94.133 689 3390 1 chr3B.!!$R1 2701
2 TraesCS3A01G154600 chr3D 132605756 132608885 3129 True 1127 2495 94.708 410 3390 4 chr3D.!!$R3 2980

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
692 695 0.249489 GCCGTCCGTGCATTCTAGAT 60.249 55.0 0.0 0.0 0.00 1.98 F
1397 1721 0.250166 CGGAGTGTTTTCCTTCCCGT 60.250 55.0 0.0 0.0 34.96 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1774 2102 0.036732 TCAAGAGCGGCCAAAGACAT 59.963 50.0 2.24 0.0 0.0 3.06 R
2890 3234 0.606604 TAGGCGTCAGGAGGTTGTTC 59.393 55.0 0.00 0.0 0.0 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.099380 GGAGACGTACTTCCTCTCAAAG 57.901 50.000 6.09 0.00 33.38 2.77
43 44 6.319141 CTCTCAAAGGAAAGAAATTTCGGT 57.681 37.500 12.42 4.55 0.00 4.69
44 45 7.435068 CTCTCAAAGGAAAGAAATTTCGGTA 57.565 36.000 12.42 0.00 0.00 4.02
45 46 7.811117 TCTCAAAGGAAAGAAATTTCGGTAA 57.189 32.000 12.42 0.00 0.00 2.85
46 47 7.645402 TCTCAAAGGAAAGAAATTTCGGTAAC 58.355 34.615 12.42 4.10 0.00 2.50
47 48 7.283580 TCTCAAAGGAAAGAAATTTCGGTAACA 59.716 33.333 12.42 0.00 0.00 2.41
48 49 7.197703 TCAAAGGAAAGAAATTTCGGTAACAC 58.802 34.615 12.42 1.69 0.00 3.32
49 50 6.702716 AAGGAAAGAAATTTCGGTAACACA 57.297 33.333 12.42 0.00 0.00 3.72
50 51 6.894339 AGGAAAGAAATTTCGGTAACACAT 57.106 33.333 12.42 0.00 0.00 3.21
51 52 7.284919 AGGAAAGAAATTTCGGTAACACATT 57.715 32.000 12.42 0.00 0.00 2.71
52 53 7.368059 AGGAAAGAAATTTCGGTAACACATTC 58.632 34.615 12.42 7.15 0.00 2.67
53 54 7.230712 AGGAAAGAAATTTCGGTAACACATTCT 59.769 33.333 12.42 0.00 0.00 2.40
54 55 7.537649 GGAAAGAAATTTCGGTAACACATTCTC 59.462 37.037 12.42 0.00 0.00 2.87
55 56 7.504924 AAGAAATTTCGGTAACACATTCTCA 57.495 32.000 12.42 0.00 0.00 3.27
56 57 7.687941 AGAAATTTCGGTAACACATTCTCAT 57.312 32.000 12.42 0.00 0.00 2.90
57 58 7.752695 AGAAATTTCGGTAACACATTCTCATC 58.247 34.615 12.42 0.00 0.00 2.92
58 59 7.607991 AGAAATTTCGGTAACACATTCTCATCT 59.392 33.333 12.42 0.00 0.00 2.90
59 60 6.910536 ATTTCGGTAACACATTCTCATCTC 57.089 37.500 0.00 0.00 0.00 2.75
60 61 4.386867 TCGGTAACACATTCTCATCTCC 57.613 45.455 0.00 0.00 0.00 3.71
61 62 3.767131 TCGGTAACACATTCTCATCTCCA 59.233 43.478 0.00 0.00 0.00 3.86
62 63 4.405680 TCGGTAACACATTCTCATCTCCAT 59.594 41.667 0.00 0.00 0.00 3.41
63 64 4.747108 CGGTAACACATTCTCATCTCCATC 59.253 45.833 0.00 0.00 0.00 3.51
64 65 4.747108 GGTAACACATTCTCATCTCCATCG 59.253 45.833 0.00 0.00 0.00 3.84
65 66 3.465742 ACACATTCTCATCTCCATCGG 57.534 47.619 0.00 0.00 0.00 4.18
66 67 2.768527 ACACATTCTCATCTCCATCGGT 59.231 45.455 0.00 0.00 0.00 4.69
67 68 3.198635 ACACATTCTCATCTCCATCGGTT 59.801 43.478 0.00 0.00 0.00 4.44
68 69 3.806521 CACATTCTCATCTCCATCGGTTC 59.193 47.826 0.00 0.00 0.00 3.62
69 70 3.181461 ACATTCTCATCTCCATCGGTTCC 60.181 47.826 0.00 0.00 0.00 3.62
70 71 2.159179 TCTCATCTCCATCGGTTCCA 57.841 50.000 0.00 0.00 0.00 3.53
71 72 2.682594 TCTCATCTCCATCGGTTCCAT 58.317 47.619 0.00 0.00 0.00 3.41
72 73 3.041211 TCTCATCTCCATCGGTTCCATT 58.959 45.455 0.00 0.00 0.00 3.16
73 74 3.455910 TCTCATCTCCATCGGTTCCATTT 59.544 43.478 0.00 0.00 0.00 2.32
74 75 3.544684 TCATCTCCATCGGTTCCATTTG 58.455 45.455 0.00 0.00 0.00 2.32
75 76 3.054434 TCATCTCCATCGGTTCCATTTGT 60.054 43.478 0.00 0.00 0.00 2.83
76 77 2.710377 TCTCCATCGGTTCCATTTGTG 58.290 47.619 0.00 0.00 0.00 3.33
77 78 1.745087 CTCCATCGGTTCCATTTGTGG 59.255 52.381 0.00 0.00 0.00 4.17
78 79 1.074727 TCCATCGGTTCCATTTGTGGT 59.925 47.619 0.00 0.00 0.00 4.16
79 80 1.892474 CCATCGGTTCCATTTGTGGTT 59.108 47.619 0.00 0.00 0.00 3.67
80 81 3.085533 CCATCGGTTCCATTTGTGGTTA 58.914 45.455 0.00 0.00 0.00 2.85
81 82 3.699038 CCATCGGTTCCATTTGTGGTTAT 59.301 43.478 0.00 0.00 0.00 1.89
82 83 4.202010 CCATCGGTTCCATTTGTGGTTATC 60.202 45.833 0.00 0.00 0.00 1.75
83 84 4.295141 TCGGTTCCATTTGTGGTTATCT 57.705 40.909 0.00 0.00 0.00 1.98
84 85 4.258543 TCGGTTCCATTTGTGGTTATCTC 58.741 43.478 0.00 0.00 0.00 2.75
85 86 4.019681 TCGGTTCCATTTGTGGTTATCTCT 60.020 41.667 0.00 0.00 0.00 3.10
86 87 4.332819 CGGTTCCATTTGTGGTTATCTCTC 59.667 45.833 0.00 0.00 0.00 3.20
87 88 5.501156 GGTTCCATTTGTGGTTATCTCTCT 58.499 41.667 0.00 0.00 0.00 3.10
88 89 5.586643 GGTTCCATTTGTGGTTATCTCTCTC 59.413 44.000 0.00 0.00 0.00 3.20
89 90 5.359194 TCCATTTGTGGTTATCTCTCTCC 57.641 43.478 0.00 0.00 0.00 3.71
90 91 5.032846 TCCATTTGTGGTTATCTCTCTCCT 58.967 41.667 0.00 0.00 0.00 3.69
91 92 5.488919 TCCATTTGTGGTTATCTCTCTCCTT 59.511 40.000 0.00 0.00 0.00 3.36
92 93 6.012508 TCCATTTGTGGTTATCTCTCTCCTTT 60.013 38.462 0.00 0.00 0.00 3.11
93 94 7.182026 TCCATTTGTGGTTATCTCTCTCCTTTA 59.818 37.037 0.00 0.00 0.00 1.85
94 95 7.995488 CCATTTGTGGTTATCTCTCTCCTTTAT 59.005 37.037 0.00 0.00 0.00 1.40
95 96 9.401058 CATTTGTGGTTATCTCTCTCCTTTATT 57.599 33.333 0.00 0.00 0.00 1.40
96 97 9.981460 ATTTGTGGTTATCTCTCTCCTTTATTT 57.019 29.630 0.00 0.00 0.00 1.40
97 98 9.807921 TTTGTGGTTATCTCTCTCCTTTATTTT 57.192 29.630 0.00 0.00 0.00 1.82
98 99 8.792830 TGTGGTTATCTCTCTCCTTTATTTTG 57.207 34.615 0.00 0.00 0.00 2.44
99 100 8.383175 TGTGGTTATCTCTCTCCTTTATTTTGT 58.617 33.333 0.00 0.00 0.00 2.83
100 101 8.669243 GTGGTTATCTCTCTCCTTTATTTTGTG 58.331 37.037 0.00 0.00 0.00 3.33
101 102 7.336931 TGGTTATCTCTCTCCTTTATTTTGTGC 59.663 37.037 0.00 0.00 0.00 4.57
102 103 7.336931 GGTTATCTCTCTCCTTTATTTTGTGCA 59.663 37.037 0.00 0.00 0.00 4.57
103 104 8.730680 GTTATCTCTCTCCTTTATTTTGTGCAA 58.269 33.333 0.00 0.00 0.00 4.08
104 105 7.765695 ATCTCTCTCCTTTATTTTGTGCAAA 57.234 32.000 0.00 0.00 0.00 3.68
105 106 6.970484 TCTCTCTCCTTTATTTTGTGCAAAC 58.030 36.000 0.00 0.00 0.00 2.93
106 107 6.772716 TCTCTCTCCTTTATTTTGTGCAAACT 59.227 34.615 0.00 0.00 0.00 2.66
107 108 7.936847 TCTCTCTCCTTTATTTTGTGCAAACTA 59.063 33.333 0.00 0.00 0.00 2.24
108 109 8.635765 TCTCTCCTTTATTTTGTGCAAACTAT 57.364 30.769 0.00 0.00 0.00 2.12
109 110 9.077885 TCTCTCCTTTATTTTGTGCAAACTATT 57.922 29.630 0.00 0.00 0.00 1.73
110 111 9.132521 CTCTCCTTTATTTTGTGCAAACTATTG 57.867 33.333 0.00 0.00 39.65 1.90
111 112 8.637986 TCTCCTTTATTTTGTGCAAACTATTGT 58.362 29.630 0.00 0.00 38.85 2.71
112 113 9.260002 CTCCTTTATTTTGTGCAAACTATTGTT 57.740 29.630 0.00 0.00 38.85 2.83
113 114 9.039870 TCCTTTATTTTGTGCAAACTATTGTTG 57.960 29.630 0.00 0.00 38.85 3.33
114 115 8.825745 CCTTTATTTTGTGCAAACTATTGTTGT 58.174 29.630 0.00 0.00 38.85 3.32
115 116 9.635632 CTTTATTTTGTGCAAACTATTGTTGTG 57.364 29.630 0.00 0.00 38.85 3.33
116 117 8.709386 TTATTTTGTGCAAACTATTGTTGTGT 57.291 26.923 0.00 0.00 38.85 3.72
117 118 7.608308 ATTTTGTGCAAACTATTGTTGTGTT 57.392 28.000 0.00 0.00 38.85 3.32
118 119 6.400579 TTTGTGCAAACTATTGTTGTGTTG 57.599 33.333 0.00 0.00 38.85 3.33
119 120 5.065704 TGTGCAAACTATTGTTGTGTTGT 57.934 34.783 0.00 0.00 38.85 3.32
120 121 6.196079 TGTGCAAACTATTGTTGTGTTGTA 57.804 33.333 0.00 0.00 38.85 2.41
121 122 6.800543 TGTGCAAACTATTGTTGTGTTGTAT 58.199 32.000 0.00 0.00 38.85 2.29
122 123 6.915300 TGTGCAAACTATTGTTGTGTTGTATC 59.085 34.615 0.00 0.00 38.85 2.24
123 124 6.915300 GTGCAAACTATTGTTGTGTTGTATCA 59.085 34.615 0.00 0.00 38.85 2.15
124 125 7.594758 GTGCAAACTATTGTTGTGTTGTATCAT 59.405 33.333 0.00 0.00 38.85 2.45
125 126 8.140628 TGCAAACTATTGTTGTGTTGTATCATT 58.859 29.630 0.00 0.00 38.85 2.57
126 127 8.977505 GCAAACTATTGTTGTGTTGTATCATTT 58.022 29.630 0.00 0.00 38.85 2.32
128 129 8.519492 AACTATTGTTGTGTTGTATCATTTGC 57.481 30.769 0.00 0.00 34.71 3.68
129 130 7.885297 ACTATTGTTGTGTTGTATCATTTGCT 58.115 30.769 0.00 0.00 0.00 3.91
130 131 8.359642 ACTATTGTTGTGTTGTATCATTTGCTT 58.640 29.630 0.00 0.00 0.00 3.91
131 132 6.825284 TTGTTGTGTTGTATCATTTGCTTG 57.175 33.333 0.00 0.00 0.00 4.01
132 133 4.744137 TGTTGTGTTGTATCATTTGCTTGC 59.256 37.500 0.00 0.00 0.00 4.01
133 134 4.581077 TGTGTTGTATCATTTGCTTGCA 57.419 36.364 0.00 0.00 0.00 4.08
134 135 4.297510 TGTGTTGTATCATTTGCTTGCAC 58.702 39.130 0.00 0.00 0.00 4.57
135 136 4.037803 TGTGTTGTATCATTTGCTTGCACT 59.962 37.500 0.00 0.00 0.00 4.40
136 137 4.984161 GTGTTGTATCATTTGCTTGCACTT 59.016 37.500 0.00 0.00 0.00 3.16
137 138 4.983538 TGTTGTATCATTTGCTTGCACTTG 59.016 37.500 0.00 0.00 0.00 3.16
138 139 4.852134 TGTATCATTTGCTTGCACTTGT 57.148 36.364 0.00 0.00 0.00 3.16
139 140 5.199024 TGTATCATTTGCTTGCACTTGTT 57.801 34.783 0.00 0.00 0.00 2.83
140 141 4.983538 TGTATCATTTGCTTGCACTTGTTG 59.016 37.500 0.00 0.00 0.00 3.33
141 142 3.523606 TCATTTGCTTGCACTTGTTGT 57.476 38.095 0.00 0.00 0.00 3.32
142 143 3.859443 TCATTTGCTTGCACTTGTTGTT 58.141 36.364 0.00 0.00 0.00 2.83
143 144 3.617706 TCATTTGCTTGCACTTGTTGTTG 59.382 39.130 0.00 0.00 0.00 3.33
144 145 2.739885 TTGCTTGCACTTGTTGTTGT 57.260 40.000 0.00 0.00 0.00 3.32
145 146 2.739885 TGCTTGCACTTGTTGTTGTT 57.260 40.000 0.00 0.00 0.00 2.83
146 147 2.335752 TGCTTGCACTTGTTGTTGTTG 58.664 42.857 0.00 0.00 0.00 3.33
147 148 2.288702 TGCTTGCACTTGTTGTTGTTGT 60.289 40.909 0.00 0.00 0.00 3.32
148 149 2.736192 GCTTGCACTTGTTGTTGTTGTT 59.264 40.909 0.00 0.00 0.00 2.83
149 150 3.923461 GCTTGCACTTGTTGTTGTTGTTA 59.077 39.130 0.00 0.00 0.00 2.41
150 151 4.031652 GCTTGCACTTGTTGTTGTTGTTAG 59.968 41.667 0.00 0.00 0.00 2.34
151 152 3.506810 TGCACTTGTTGTTGTTGTTAGC 58.493 40.909 0.00 0.00 0.00 3.09
152 153 3.057245 TGCACTTGTTGTTGTTGTTAGCA 60.057 39.130 0.00 0.00 0.00 3.49
153 154 4.111916 GCACTTGTTGTTGTTGTTAGCAT 58.888 39.130 0.00 0.00 0.00 3.79
154 155 4.207019 GCACTTGTTGTTGTTGTTAGCATC 59.793 41.667 0.00 0.00 0.00 3.91
155 156 5.339177 CACTTGTTGTTGTTGTTAGCATCA 58.661 37.500 0.00 0.00 0.00 3.07
156 157 5.978919 CACTTGTTGTTGTTGTTAGCATCAT 59.021 36.000 0.00 0.00 0.00 2.45
157 158 7.138081 CACTTGTTGTTGTTGTTAGCATCATA 58.862 34.615 0.00 0.00 0.00 2.15
158 159 7.809331 CACTTGTTGTTGTTGTTAGCATCATAT 59.191 33.333 0.00 0.00 0.00 1.78
159 160 9.008965 ACTTGTTGTTGTTGTTAGCATCATATA 57.991 29.630 0.00 0.00 0.00 0.86
160 161 9.494479 CTTGTTGTTGTTGTTAGCATCATATAG 57.506 33.333 0.00 0.00 0.00 1.31
161 162 7.984391 TGTTGTTGTTGTTAGCATCATATAGG 58.016 34.615 0.00 0.00 0.00 2.57
162 163 7.609918 TGTTGTTGTTGTTAGCATCATATAGGT 59.390 33.333 0.00 0.00 0.00 3.08
163 164 8.458843 GTTGTTGTTGTTAGCATCATATAGGTT 58.541 33.333 0.00 0.00 0.00 3.50
164 165 7.984391 TGTTGTTGTTAGCATCATATAGGTTG 58.016 34.615 0.00 0.00 0.00 3.77
165 166 7.609918 TGTTGTTGTTAGCATCATATAGGTTGT 59.390 33.333 0.00 0.00 0.00 3.32
166 167 8.458843 GTTGTTGTTAGCATCATATAGGTTGTT 58.541 33.333 0.00 0.00 0.00 2.83
167 168 8.208718 TGTTGTTAGCATCATATAGGTTGTTC 57.791 34.615 0.00 0.00 0.00 3.18
168 169 7.826744 TGTTGTTAGCATCATATAGGTTGTTCA 59.173 33.333 0.00 0.00 0.00 3.18
169 170 7.786178 TGTTAGCATCATATAGGTTGTTCAC 57.214 36.000 0.00 0.00 0.00 3.18
180 181 2.294074 GGTTGTTCACCTAGTTGCACA 58.706 47.619 0.00 0.00 43.29 4.57
181 182 2.884639 GGTTGTTCACCTAGTTGCACAT 59.115 45.455 0.00 0.00 43.29 3.21
182 183 3.058224 GGTTGTTCACCTAGTTGCACATC 60.058 47.826 0.00 0.00 43.29 3.06
183 184 3.769739 TGTTCACCTAGTTGCACATCT 57.230 42.857 0.00 0.00 0.00 2.90
184 185 4.882842 TGTTCACCTAGTTGCACATCTA 57.117 40.909 0.00 0.00 0.00 1.98
185 186 4.820897 TGTTCACCTAGTTGCACATCTAG 58.179 43.478 8.26 8.26 34.98 2.43
186 187 4.526650 TGTTCACCTAGTTGCACATCTAGA 59.473 41.667 14.55 0.00 36.66 2.43
187 188 4.720649 TCACCTAGTTGCACATCTAGAC 57.279 45.455 14.55 0.00 36.66 2.59
188 189 4.086457 TCACCTAGTTGCACATCTAGACA 58.914 43.478 14.55 0.00 36.66 3.41
189 190 4.526650 TCACCTAGTTGCACATCTAGACAA 59.473 41.667 14.55 0.00 36.66 3.18
190 191 4.627467 CACCTAGTTGCACATCTAGACAAC 59.373 45.833 13.43 13.43 42.08 3.32
191 192 4.184629 CCTAGTTGCACATCTAGACAACC 58.815 47.826 16.29 3.97 42.61 3.77
192 193 4.081420 CCTAGTTGCACATCTAGACAACCT 60.081 45.833 16.29 9.28 42.61 3.50
193 194 5.127194 CCTAGTTGCACATCTAGACAACCTA 59.873 44.000 16.29 9.74 42.61 3.08
194 195 5.683876 AGTTGCACATCTAGACAACCTAT 57.316 39.130 16.29 1.15 42.61 2.57
195 196 6.054860 AGTTGCACATCTAGACAACCTATT 57.945 37.500 16.29 0.87 42.61 1.73
196 197 6.476378 AGTTGCACATCTAGACAACCTATTT 58.524 36.000 16.29 0.58 42.61 1.40
197 198 7.620880 AGTTGCACATCTAGACAACCTATTTA 58.379 34.615 16.29 0.00 42.61 1.40
198 199 8.267894 AGTTGCACATCTAGACAACCTATTTAT 58.732 33.333 16.29 0.00 42.61 1.40
199 200 8.893727 GTTGCACATCTAGACAACCTATTTATT 58.106 33.333 11.17 0.00 37.11 1.40
200 201 8.437360 TGCACATCTAGACAACCTATTTATTG 57.563 34.615 0.00 0.00 0.00 1.90
201 202 7.012327 TGCACATCTAGACAACCTATTTATTGC 59.988 37.037 0.00 0.00 0.00 3.56
202 203 7.227512 GCACATCTAGACAACCTATTTATTGCT 59.772 37.037 0.00 0.00 0.00 3.91
203 204 9.764363 CACATCTAGACAACCTATTTATTGCTA 57.236 33.333 0.00 0.00 0.00 3.49
225 226 9.389570 TGCTAAACTTAATTTACGAAGAAAAGC 57.610 29.630 0.00 0.00 0.00 3.51
226 227 9.608617 GCTAAACTTAATTTACGAAGAAAAGCT 57.391 29.630 0.00 0.00 0.00 3.74
240 241 9.233232 ACGAAGAAAAGCTAAAATTGTTAGTTG 57.767 29.630 0.00 0.00 0.00 3.16
241 242 8.207906 CGAAGAAAAGCTAAAATTGTTAGTTGC 58.792 33.333 0.00 0.00 0.00 4.17
242 243 7.946655 AGAAAAGCTAAAATTGTTAGTTGCC 57.053 32.000 0.00 0.00 0.00 4.52
243 244 7.726216 AGAAAAGCTAAAATTGTTAGTTGCCT 58.274 30.769 0.00 0.00 0.00 4.75
244 245 8.856103 AGAAAAGCTAAAATTGTTAGTTGCCTA 58.144 29.630 0.00 0.00 0.00 3.93
245 246 9.639601 GAAAAGCTAAAATTGTTAGTTGCCTAT 57.360 29.630 0.00 0.00 0.00 2.57
246 247 9.996554 AAAAGCTAAAATTGTTAGTTGCCTATT 57.003 25.926 0.00 0.00 0.00 1.73
247 248 9.639601 AAAGCTAAAATTGTTAGTTGCCTATTC 57.360 29.630 0.00 0.00 0.00 1.75
248 249 8.348285 AGCTAAAATTGTTAGTTGCCTATTCA 57.652 30.769 0.00 0.00 0.00 2.57
249 250 8.244113 AGCTAAAATTGTTAGTTGCCTATTCAC 58.756 33.333 0.00 0.00 0.00 3.18
250 251 7.488150 GCTAAAATTGTTAGTTGCCTATTCACC 59.512 37.037 0.00 0.00 0.00 4.02
251 252 5.914898 AATTGTTAGTTGCCTATTCACCC 57.085 39.130 0.00 0.00 0.00 4.61
252 253 4.650972 TTGTTAGTTGCCTATTCACCCT 57.349 40.909 0.00 0.00 0.00 4.34
253 254 4.650972 TGTTAGTTGCCTATTCACCCTT 57.349 40.909 0.00 0.00 0.00 3.95
254 255 4.585879 TGTTAGTTGCCTATTCACCCTTC 58.414 43.478 0.00 0.00 0.00 3.46
255 256 2.808906 AGTTGCCTATTCACCCTTCC 57.191 50.000 0.00 0.00 0.00 3.46
256 257 1.285078 AGTTGCCTATTCACCCTTCCC 59.715 52.381 0.00 0.00 0.00 3.97
257 258 1.285078 GTTGCCTATTCACCCTTCCCT 59.715 52.381 0.00 0.00 0.00 4.20
258 259 2.508300 GTTGCCTATTCACCCTTCCCTA 59.492 50.000 0.00 0.00 0.00 3.53
259 260 2.853430 TGCCTATTCACCCTTCCCTAA 58.147 47.619 0.00 0.00 0.00 2.69
260 261 3.403322 TGCCTATTCACCCTTCCCTAAT 58.597 45.455 0.00 0.00 0.00 1.73
261 262 3.394606 TGCCTATTCACCCTTCCCTAATC 59.605 47.826 0.00 0.00 0.00 1.75
262 263 3.394606 GCCTATTCACCCTTCCCTAATCA 59.605 47.826 0.00 0.00 0.00 2.57
263 264 4.141251 GCCTATTCACCCTTCCCTAATCAA 60.141 45.833 0.00 0.00 0.00 2.57
264 265 5.458215 GCCTATTCACCCTTCCCTAATCAAT 60.458 44.000 0.00 0.00 0.00 2.57
265 266 6.241645 CCTATTCACCCTTCCCTAATCAATC 58.758 44.000 0.00 0.00 0.00 2.67
266 267 5.732331 ATTCACCCTTCCCTAATCAATCA 57.268 39.130 0.00 0.00 0.00 2.57
267 268 5.732331 TTCACCCTTCCCTAATCAATCAT 57.268 39.130 0.00 0.00 0.00 2.45
268 269 6.840090 TTCACCCTTCCCTAATCAATCATA 57.160 37.500 0.00 0.00 0.00 2.15
269 270 7.406620 TTCACCCTTCCCTAATCAATCATAT 57.593 36.000 0.00 0.00 0.00 1.78
270 271 7.020827 TCACCCTTCCCTAATCAATCATATC 57.979 40.000 0.00 0.00 0.00 1.63
271 272 5.877012 CACCCTTCCCTAATCAATCATATCG 59.123 44.000 0.00 0.00 0.00 2.92
272 273 5.785423 ACCCTTCCCTAATCAATCATATCGA 59.215 40.000 0.00 0.00 0.00 3.59
273 274 6.445139 ACCCTTCCCTAATCAATCATATCGAT 59.555 38.462 2.16 2.16 35.12 3.59
274 275 6.989169 CCCTTCCCTAATCAATCATATCGATC 59.011 42.308 0.00 0.00 31.11 3.69
275 276 6.989169 CCTTCCCTAATCAATCATATCGATCC 59.011 42.308 0.00 0.00 31.11 3.36
276 277 7.147585 CCTTCCCTAATCAATCATATCGATCCT 60.148 40.741 0.00 0.00 31.11 3.24
277 278 7.739995 TCCCTAATCAATCATATCGATCCTT 57.260 36.000 0.00 0.00 31.11 3.36
278 279 8.150827 TCCCTAATCAATCATATCGATCCTTT 57.849 34.615 0.00 0.00 31.11 3.11
279 280 8.260818 TCCCTAATCAATCATATCGATCCTTTC 58.739 37.037 0.00 0.00 31.11 2.62
280 281 8.043113 CCCTAATCAATCATATCGATCCTTTCA 58.957 37.037 0.00 0.00 31.11 2.69
281 282 9.610705 CCTAATCAATCATATCGATCCTTTCAT 57.389 33.333 0.00 0.00 31.11 2.57
287 288 9.499585 CAATCATATCGATCCTTTCATAAATGC 57.500 33.333 0.00 0.00 31.11 3.56
288 289 7.615582 TCATATCGATCCTTTCATAAATGCC 57.384 36.000 0.00 0.00 0.00 4.40
289 290 7.397221 TCATATCGATCCTTTCATAAATGCCT 58.603 34.615 0.00 0.00 0.00 4.75
290 291 8.539544 TCATATCGATCCTTTCATAAATGCCTA 58.460 33.333 0.00 0.00 0.00 3.93
291 292 9.166173 CATATCGATCCTTTCATAAATGCCTAA 57.834 33.333 0.00 0.00 0.00 2.69
292 293 9.739276 ATATCGATCCTTTCATAAATGCCTAAA 57.261 29.630 0.00 0.00 0.00 1.85
293 294 7.873719 TCGATCCTTTCATAAATGCCTAAAA 57.126 32.000 0.00 0.00 0.00 1.52
294 295 8.287439 TCGATCCTTTCATAAATGCCTAAAAA 57.713 30.769 0.00 0.00 0.00 1.94
310 311 1.609208 AAAAAGAGGCGTGTCATGCT 58.391 45.000 16.44 3.09 0.00 3.79
311 312 1.609208 AAAAGAGGCGTGTCATGCTT 58.391 45.000 16.44 9.29 0.00 3.91
312 313 1.609208 AAAGAGGCGTGTCATGCTTT 58.391 45.000 16.44 6.92 0.00 3.51
313 314 1.609208 AAGAGGCGTGTCATGCTTTT 58.391 45.000 16.44 1.54 0.00 2.27
314 315 2.472695 AGAGGCGTGTCATGCTTTTA 57.527 45.000 16.44 0.00 0.00 1.52
315 316 2.778299 AGAGGCGTGTCATGCTTTTAA 58.222 42.857 16.44 0.00 0.00 1.52
316 317 2.744202 AGAGGCGTGTCATGCTTTTAAG 59.256 45.455 16.44 0.00 0.00 1.85
317 318 2.742053 GAGGCGTGTCATGCTTTTAAGA 59.258 45.455 16.44 0.00 0.00 2.10
318 319 2.484264 AGGCGTGTCATGCTTTTAAGAC 59.516 45.455 16.44 0.00 0.00 3.01
319 320 2.495939 GCGTGTCATGCTTTTAAGACG 58.504 47.619 9.90 0.00 33.83 4.18
320 321 2.495939 CGTGTCATGCTTTTAAGACGC 58.504 47.619 0.00 0.00 37.95 5.19
321 322 2.724839 CGTGTCATGCTTTTAAGACGCC 60.725 50.000 0.00 0.00 38.03 5.68
322 323 2.484264 GTGTCATGCTTTTAAGACGCCT 59.516 45.455 0.00 0.00 35.95 5.52
323 324 3.682858 GTGTCATGCTTTTAAGACGCCTA 59.317 43.478 0.00 0.00 35.95 3.93
324 325 4.153475 GTGTCATGCTTTTAAGACGCCTAA 59.847 41.667 0.00 0.00 35.95 2.69
325 326 4.153475 TGTCATGCTTTTAAGACGCCTAAC 59.847 41.667 0.00 0.00 33.83 2.34
326 327 4.392138 GTCATGCTTTTAAGACGCCTAACT 59.608 41.667 0.00 0.00 0.00 2.24
327 328 4.391830 TCATGCTTTTAAGACGCCTAACTG 59.608 41.667 0.00 0.00 0.00 3.16
328 329 3.735591 TGCTTTTAAGACGCCTAACTGT 58.264 40.909 0.00 0.00 0.00 3.55
329 330 4.885413 TGCTTTTAAGACGCCTAACTGTA 58.115 39.130 0.00 0.00 0.00 2.74
330 331 5.484715 TGCTTTTAAGACGCCTAACTGTAT 58.515 37.500 0.00 0.00 0.00 2.29
331 332 5.350365 TGCTTTTAAGACGCCTAACTGTATG 59.650 40.000 0.00 0.00 0.00 2.39
332 333 5.579511 GCTTTTAAGACGCCTAACTGTATGA 59.420 40.000 0.00 0.00 0.00 2.15
333 334 6.258068 GCTTTTAAGACGCCTAACTGTATGAT 59.742 38.462 0.00 0.00 0.00 2.45
334 335 7.534085 TTTTAAGACGCCTAACTGTATGATG 57.466 36.000 0.00 0.00 0.00 3.07
335 336 4.737855 AAGACGCCTAACTGTATGATGT 57.262 40.909 0.00 0.00 0.00 3.06
336 337 4.046938 AGACGCCTAACTGTATGATGTG 57.953 45.455 0.00 0.00 0.00 3.21
337 338 3.699538 AGACGCCTAACTGTATGATGTGA 59.300 43.478 0.00 0.00 0.00 3.58
338 339 4.342378 AGACGCCTAACTGTATGATGTGAT 59.658 41.667 0.00 0.00 0.00 3.06
339 340 5.535030 AGACGCCTAACTGTATGATGTGATA 59.465 40.000 0.00 0.00 0.00 2.15
340 341 5.773575 ACGCCTAACTGTATGATGTGATAG 58.226 41.667 0.00 0.00 0.00 2.08
341 342 5.302059 ACGCCTAACTGTATGATGTGATAGT 59.698 40.000 0.00 0.00 0.00 2.12
342 343 6.489022 ACGCCTAACTGTATGATGTGATAGTA 59.511 38.462 0.00 0.00 0.00 1.82
343 344 7.013942 ACGCCTAACTGTATGATGTGATAGTAA 59.986 37.037 0.00 0.00 0.00 2.24
344 345 7.865889 CGCCTAACTGTATGATGTGATAGTAAA 59.134 37.037 0.00 0.00 0.00 2.01
345 346 9.542462 GCCTAACTGTATGATGTGATAGTAAAA 57.458 33.333 0.00 0.00 0.00 1.52
354 355 7.420184 TGATGTGATAGTAAAACATATGCCG 57.580 36.000 1.58 0.00 34.74 5.69
355 356 5.666969 TGTGATAGTAAAACATATGCCGC 57.333 39.130 1.58 0.00 0.00 6.53
356 357 4.210328 TGTGATAGTAAAACATATGCCGCG 59.790 41.667 1.58 0.00 0.00 6.46
357 358 4.210537 GTGATAGTAAAACATATGCCGCGT 59.789 41.667 4.92 0.00 0.00 6.01
358 359 4.446385 TGATAGTAAAACATATGCCGCGTC 59.554 41.667 4.92 0.00 0.00 5.19
359 360 2.901249 AGTAAAACATATGCCGCGTCT 58.099 42.857 4.92 0.00 0.00 4.18
360 361 3.267483 AGTAAAACATATGCCGCGTCTT 58.733 40.909 4.92 0.00 0.00 3.01
361 362 4.435425 AGTAAAACATATGCCGCGTCTTA 58.565 39.130 4.92 0.00 0.00 2.10
362 363 3.944422 AAAACATATGCCGCGTCTTAG 57.056 42.857 4.92 0.00 0.00 2.18
363 364 2.596904 AACATATGCCGCGTCTTAGT 57.403 45.000 4.92 0.00 0.00 2.24
364 365 3.720949 AACATATGCCGCGTCTTAGTA 57.279 42.857 4.92 0.00 0.00 1.82
365 366 3.936372 ACATATGCCGCGTCTTAGTAT 57.064 42.857 4.92 0.00 0.00 2.12
366 367 3.575630 ACATATGCCGCGTCTTAGTATG 58.424 45.455 4.92 7.39 0.00 2.39
367 368 3.005472 ACATATGCCGCGTCTTAGTATGT 59.995 43.478 4.92 7.99 0.00 2.29
368 369 4.216902 ACATATGCCGCGTCTTAGTATGTA 59.783 41.667 4.92 0.00 31.62 2.29
369 370 2.768833 TGCCGCGTCTTAGTATGTAG 57.231 50.000 4.92 0.00 0.00 2.74
370 371 2.019249 TGCCGCGTCTTAGTATGTAGT 58.981 47.619 4.92 0.00 0.00 2.73
371 372 2.223409 TGCCGCGTCTTAGTATGTAGTG 60.223 50.000 4.92 0.00 0.00 2.74
372 373 2.382519 CCGCGTCTTAGTATGTAGTGC 58.617 52.381 4.92 0.00 0.00 4.40
373 374 2.034789 CGCGTCTTAGTATGTAGTGCG 58.965 52.381 0.00 0.00 36.96 5.34
374 375 2.538333 CGCGTCTTAGTATGTAGTGCGT 60.538 50.000 0.00 0.00 38.39 5.24
375 376 3.432782 GCGTCTTAGTATGTAGTGCGTT 58.567 45.455 0.00 0.00 0.00 4.84
376 377 4.591202 GCGTCTTAGTATGTAGTGCGTTA 58.409 43.478 0.00 0.00 0.00 3.18
377 378 4.669728 GCGTCTTAGTATGTAGTGCGTTAG 59.330 45.833 0.00 0.00 0.00 2.34
378 379 5.203370 CGTCTTAGTATGTAGTGCGTTAGG 58.797 45.833 0.00 0.00 0.00 2.69
379 380 4.974888 GTCTTAGTATGTAGTGCGTTAGGC 59.025 45.833 0.00 0.00 43.96 3.93
380 381 2.884894 AGTATGTAGTGCGTTAGGCC 57.115 50.000 0.00 0.00 42.61 5.19
381 382 1.066605 AGTATGTAGTGCGTTAGGCCG 59.933 52.381 0.00 0.00 42.61 6.13
382 383 0.386476 TATGTAGTGCGTTAGGCCGG 59.614 55.000 0.00 0.00 42.61 6.13
383 384 2.889018 GTAGTGCGTTAGGCCGGC 60.889 66.667 21.18 21.18 42.61 6.13
384 385 4.501714 TAGTGCGTTAGGCCGGCG 62.502 66.667 22.54 7.20 42.61 6.46
401 402 3.047280 GCCACATTGACGGCGTGA 61.047 61.111 21.19 5.98 38.82 4.35
402 403 2.860293 CCACATTGACGGCGTGAC 59.140 61.111 21.19 4.04 32.23 3.67
403 404 2.677003 CCACATTGACGGCGTGACC 61.677 63.158 21.19 3.11 32.23 4.02
404 405 1.958715 CACATTGACGGCGTGACCA 60.959 57.895 21.19 6.52 39.03 4.02
405 406 1.227704 ACATTGACGGCGTGACCAA 60.228 52.632 21.19 16.66 39.03 3.67
406 407 1.206578 CATTGACGGCGTGACCAAC 59.793 57.895 21.19 1.27 39.03 3.77
456 459 1.232621 GGGACGTGTAAGTTGGTGCC 61.233 60.000 0.00 0.00 33.73 5.01
513 516 1.133482 AGTTTTTGAGGGGTCAGTGGG 60.133 52.381 0.00 0.00 0.00 4.61
532 535 2.884827 GGCGAAATAAGTACGTCCAGT 58.115 47.619 0.00 0.00 0.00 4.00
567 570 9.668497 AGTAAAAATAATACTCCCTCTGTTCAC 57.332 33.333 0.00 0.00 0.00 3.18
568 571 9.668497 GTAAAAATAATACTCCCTCTGTTCACT 57.332 33.333 0.00 0.00 0.00 3.41
570 573 9.588096 AAAAATAATACTCCCTCTGTTCACTTT 57.412 29.630 0.00 0.00 0.00 2.66
571 574 9.588096 AAAATAATACTCCCTCTGTTCACTTTT 57.412 29.630 0.00 0.00 0.00 2.27
576 579 9.892130 AATACTCCCTCTGTTCACTTTTATAAG 57.108 33.333 0.00 0.00 37.40 1.73
577 580 7.554959 ACTCCCTCTGTTCACTTTTATAAGA 57.445 36.000 0.00 0.00 35.30 2.10
578 581 7.387643 ACTCCCTCTGTTCACTTTTATAAGAC 58.612 38.462 0.00 0.00 35.30 3.01
579 582 6.708285 TCCCTCTGTTCACTTTTATAAGACC 58.292 40.000 0.00 0.00 35.30 3.85
580 583 6.500751 TCCCTCTGTTCACTTTTATAAGACCT 59.499 38.462 0.00 0.00 35.30 3.85
581 584 7.017254 TCCCTCTGTTCACTTTTATAAGACCTT 59.983 37.037 0.00 0.00 35.30 3.50
582 585 7.119846 CCCTCTGTTCACTTTTATAAGACCTTG 59.880 40.741 0.00 0.00 35.30 3.61
583 586 7.878127 CCTCTGTTCACTTTTATAAGACCTTGA 59.122 37.037 0.00 0.00 35.30 3.02
584 587 9.273016 CTCTGTTCACTTTTATAAGACCTTGAA 57.727 33.333 0.00 0.00 35.30 2.69
585 588 9.273016 TCTGTTCACTTTTATAAGACCTTGAAG 57.727 33.333 0.00 0.00 35.30 3.02
586 589 9.273016 CTGTTCACTTTTATAAGACCTTGAAGA 57.727 33.333 0.00 0.00 35.30 2.87
587 590 9.052759 TGTTCACTTTTATAAGACCTTGAAGAC 57.947 33.333 0.00 0.00 35.30 3.01
588 591 9.052759 GTTCACTTTTATAAGACCTTGAAGACA 57.947 33.333 0.00 0.00 35.30 3.41
589 592 9.793259 TTCACTTTTATAAGACCTTGAAGACAT 57.207 29.630 0.00 0.00 35.30 3.06
590 593 9.793259 TCACTTTTATAAGACCTTGAAGACATT 57.207 29.630 0.00 0.00 35.30 2.71
596 599 7.913674 ATAAGACCTTGAAGACATTTCAGAC 57.086 36.000 0.00 0.00 0.00 3.51
597 600 5.296151 AGACCTTGAAGACATTTCAGACA 57.704 39.130 0.00 0.00 0.00 3.41
598 601 5.684704 AGACCTTGAAGACATTTCAGACAA 58.315 37.500 0.00 0.00 0.00 3.18
599 602 6.302269 AGACCTTGAAGACATTTCAGACAAT 58.698 36.000 0.00 0.00 0.00 2.71
600 603 6.206243 AGACCTTGAAGACATTTCAGACAATG 59.794 38.462 0.00 0.00 39.67 2.82
602 605 6.147581 CCTTGAAGACATTTCAGACAATGTG 58.852 40.000 12.82 2.31 45.55 3.21
603 606 6.238842 CCTTGAAGACATTTCAGACAATGTGT 60.239 38.462 12.82 8.23 45.55 3.72
604 607 7.041167 CCTTGAAGACATTTCAGACAATGTGTA 60.041 37.037 12.82 0.00 45.55 2.90
605 608 7.800155 TGAAGACATTTCAGACAATGTGTAA 57.200 32.000 12.82 3.20 45.55 2.41
606 609 8.219546 TGAAGACATTTCAGACAATGTGTAAA 57.780 30.769 12.82 0.00 45.55 2.01
607 610 8.681806 TGAAGACATTTCAGACAATGTGTAAAA 58.318 29.630 12.82 0.00 45.55 1.52
608 611 8.856490 AAGACATTTCAGACAATGTGTAAAAC 57.144 30.769 12.82 2.36 45.55 2.43
609 612 7.995289 AGACATTTCAGACAATGTGTAAAACA 58.005 30.769 12.82 0.00 45.55 2.83
610 613 8.131100 AGACATTTCAGACAATGTGTAAAACAG 58.869 33.333 12.82 0.00 45.55 3.16
611 614 6.697019 ACATTTCAGACAATGTGTAAAACAGC 59.303 34.615 0.00 0.00 44.19 4.40
612 615 4.829064 TCAGACAATGTGTAAAACAGCC 57.171 40.909 0.00 0.00 43.64 4.85
613 616 4.460263 TCAGACAATGTGTAAAACAGCCT 58.540 39.130 0.00 0.00 43.64 4.58
614 617 5.616270 TCAGACAATGTGTAAAACAGCCTA 58.384 37.500 0.00 0.00 43.64 3.93
615 618 6.237901 TCAGACAATGTGTAAAACAGCCTAT 58.762 36.000 0.00 0.00 43.64 2.57
616 619 6.714810 TCAGACAATGTGTAAAACAGCCTATT 59.285 34.615 0.00 0.00 43.64 1.73
617 620 7.230510 TCAGACAATGTGTAAAACAGCCTATTT 59.769 33.333 0.00 0.00 43.64 1.40
618 621 7.867403 CAGACAATGTGTAAAACAGCCTATTTT 59.133 33.333 0.00 0.00 43.64 1.82
619 622 7.867403 AGACAATGTGTAAAACAGCCTATTTTG 59.133 33.333 0.00 0.00 43.64 2.44
620 623 7.721402 ACAATGTGTAAAACAGCCTATTTTGA 58.279 30.769 0.00 0.00 43.64 2.69
621 624 7.867403 ACAATGTGTAAAACAGCCTATTTTGAG 59.133 33.333 0.00 0.00 43.64 3.02
622 625 5.768317 TGTGTAAAACAGCCTATTTTGAGC 58.232 37.500 0.00 0.00 33.78 4.26
623 626 5.534654 TGTGTAAAACAGCCTATTTTGAGCT 59.465 36.000 0.00 0.00 37.32 4.09
629 632 3.988976 AGCCTATTTTGAGCTGTCTGA 57.011 42.857 0.00 0.00 34.99 3.27
630 633 4.292186 AGCCTATTTTGAGCTGTCTGAA 57.708 40.909 0.00 0.00 34.99 3.02
631 634 4.655963 AGCCTATTTTGAGCTGTCTGAAA 58.344 39.130 0.00 0.00 34.99 2.69
632 635 4.699257 AGCCTATTTTGAGCTGTCTGAAAG 59.301 41.667 0.00 0.00 34.99 2.62
633 636 4.697352 GCCTATTTTGAGCTGTCTGAAAGA 59.303 41.667 0.00 0.00 43.69 2.52
650 653 7.461107 TCTGAAAGAACTTACAAAAGTGAACG 58.539 34.615 0.00 0.00 45.37 3.95
651 654 6.548171 TGAAAGAACTTACAAAAGTGAACGG 58.452 36.000 0.00 0.00 45.37 4.44
652 655 6.372103 TGAAAGAACTTACAAAAGTGAACGGA 59.628 34.615 0.00 0.00 45.37 4.69
653 656 5.986004 AGAACTTACAAAAGTGAACGGAG 57.014 39.130 0.00 0.00 45.37 4.63
654 657 4.814771 AGAACTTACAAAAGTGAACGGAGG 59.185 41.667 0.00 0.00 45.37 4.30
655 658 3.473625 ACTTACAAAAGTGAACGGAGGG 58.526 45.455 0.00 0.00 44.40 4.30
656 659 3.118149 ACTTACAAAAGTGAACGGAGGGT 60.118 43.478 0.00 0.00 44.40 4.34
657 660 1.675552 ACAAAAGTGAACGGAGGGTG 58.324 50.000 0.00 0.00 0.00 4.61
658 661 1.064979 ACAAAAGTGAACGGAGGGTGT 60.065 47.619 0.00 0.00 0.00 4.16
659 662 2.171027 ACAAAAGTGAACGGAGGGTGTA 59.829 45.455 0.00 0.00 0.00 2.90
675 678 1.153309 GTACCATACCACCCGTGCC 60.153 63.158 0.00 0.00 0.00 5.01
690 693 1.153647 TGCCGTCCGTGCATTCTAG 60.154 57.895 0.00 0.00 32.85 2.43
691 694 1.141019 GCCGTCCGTGCATTCTAGA 59.859 57.895 0.00 0.00 0.00 2.43
692 695 0.249489 GCCGTCCGTGCATTCTAGAT 60.249 55.000 0.00 0.00 0.00 1.98
693 696 1.806623 GCCGTCCGTGCATTCTAGATT 60.807 52.381 0.00 0.00 0.00 2.40
694 697 2.550978 CCGTCCGTGCATTCTAGATTT 58.449 47.619 0.00 0.00 0.00 2.17
695 698 2.285220 CCGTCCGTGCATTCTAGATTTG 59.715 50.000 0.00 0.00 0.00 2.32
696 699 2.930040 CGTCCGTGCATTCTAGATTTGT 59.070 45.455 0.00 0.00 0.00 2.83
697 700 4.109766 CGTCCGTGCATTCTAGATTTGTA 58.890 43.478 0.00 0.00 0.00 2.41
698 701 4.565166 CGTCCGTGCATTCTAGATTTGTAA 59.435 41.667 0.00 0.00 0.00 2.41
700 703 6.422223 GTCCGTGCATTCTAGATTTGTAATG 58.578 40.000 0.00 0.00 33.45 1.90
703 875 5.523369 GTGCATTCTAGATTTGTAATGGGC 58.477 41.667 0.00 0.00 31.46 5.36
714 886 6.440647 AGATTTGTAATGGGCGATAGGATAGA 59.559 38.462 0.00 0.00 0.00 1.98
818 990 5.188359 ACCATTAAAAGCAGAATCTTGGCAT 59.812 36.000 0.00 0.00 0.00 4.40
841 1151 0.696501 AGCCCGGGTTCAAATGTAGT 59.303 50.000 24.63 0.00 0.00 2.73
842 1152 1.074889 AGCCCGGGTTCAAATGTAGTT 59.925 47.619 24.63 0.00 0.00 2.24
1011 1323 2.755876 AGAGACATGAGCGGCGGA 60.756 61.111 9.78 0.00 0.00 5.54
1012 1324 2.279120 GAGACATGAGCGGCGGAG 60.279 66.667 9.78 0.00 0.00 4.63
1142 1466 1.004200 CCACCGTTGAGTACCACCC 60.004 63.158 0.00 0.00 0.00 4.61
1353 1677 2.352032 CGTCCGGCTCCCTCTCTTT 61.352 63.158 0.00 0.00 0.00 2.52
1370 1694 1.626825 CTTTTTCCTCCACTCCCCGTA 59.373 52.381 0.00 0.00 0.00 4.02
1378 1702 3.152400 ACTCCCCGTACCCGATGC 61.152 66.667 0.00 0.00 35.63 3.91
1395 1719 0.536460 TGCGGAGTGTTTTCCTTCCC 60.536 55.000 0.00 0.00 34.96 3.97
1396 1720 1.574702 GCGGAGTGTTTTCCTTCCCG 61.575 60.000 0.00 0.00 38.58 5.14
1397 1721 0.250166 CGGAGTGTTTTCCTTCCCGT 60.250 55.000 0.00 0.00 34.96 5.28
1398 1722 1.001181 CGGAGTGTTTTCCTTCCCGTA 59.999 52.381 0.00 0.00 34.96 4.02
1399 1723 2.548493 CGGAGTGTTTTCCTTCCCGTAA 60.548 50.000 0.00 0.00 34.96 3.18
1400 1724 3.682696 GGAGTGTTTTCCTTCCCGTAAT 58.317 45.455 0.00 0.00 34.27 1.89
1401 1725 3.439129 GGAGTGTTTTCCTTCCCGTAATG 59.561 47.826 0.00 0.00 34.27 1.90
1402 1726 2.817844 AGTGTTTTCCTTCCCGTAATGC 59.182 45.455 0.00 0.00 0.00 3.56
1403 1727 2.094906 GTGTTTTCCTTCCCGTAATGCC 60.095 50.000 0.00 0.00 0.00 4.40
1404 1728 2.164338 GTTTTCCTTCCCGTAATGCCA 58.836 47.619 0.00 0.00 0.00 4.92
1422 1746 1.663695 CATGTAATGGTGGTCCGTCC 58.336 55.000 0.00 0.00 41.79 4.79
1774 2102 5.056480 GTGTGCTATCCAGTAATGCATGTA 58.944 41.667 0.00 0.00 36.04 2.29
1785 2113 3.806625 AATGCATGTATGTCTTTGGCC 57.193 42.857 0.00 0.00 0.00 5.36
1800 2128 3.267860 GCCGCTCTTGAGCCATCG 61.268 66.667 15.87 3.15 0.00 3.84
1808 2136 1.559219 TCTTGAGCCATCGATTTCCCA 59.441 47.619 0.00 0.00 0.00 4.37
1817 2145 6.248433 AGCCATCGATTTCCCATATAAATGT 58.752 36.000 0.00 0.00 0.00 2.71
1871 2199 4.324267 CTGATCATGCAGCTGATTCCATA 58.676 43.478 20.43 1.44 36.01 2.74
1891 2219 6.150976 TCCATAATAACAACTGAGCAGGTTTG 59.849 38.462 2.20 1.42 0.00 2.93
1965 2296 7.833285 ACTACCAAATTAACTTTCCACATGT 57.167 32.000 0.00 0.00 0.00 3.21
1966 2297 8.245195 ACTACCAAATTAACTTTCCACATGTT 57.755 30.769 0.00 0.00 0.00 2.71
2184 2519 1.237285 ACACCGCAATCAAGGCAGTC 61.237 55.000 0.00 0.00 0.00 3.51
2309 2644 2.683867 TCACCGGTCGTTTTGAACAAAT 59.316 40.909 2.59 0.00 32.01 2.32
2330 2665 5.725110 ATTTCTCGACATCTTGATTTCCG 57.275 39.130 0.00 0.00 0.00 4.30
2408 2743 1.873591 AGTCGAGAACAACATTGTGGC 59.126 47.619 0.00 0.00 41.31 5.01
2441 2776 4.010414 GATGCTCAGATGGCGCGC 62.010 66.667 25.94 25.94 0.00 6.86
2461 2796 1.463444 CGGTTGTTCTCGAAATGGGAC 59.537 52.381 0.00 0.00 0.00 4.46
2539 2874 3.319274 TGCACTGTGGTGTGGACT 58.681 55.556 10.21 0.00 44.65 3.85
2619 2959 1.005097 AGGCATGCTCTTGTGGATGAA 59.995 47.619 18.92 0.00 37.88 2.57
2632 2972 9.695526 CTCTTGTGGATGAACAAATTTGAAATA 57.304 29.630 24.64 8.17 39.47 1.40
2695 3036 6.312399 TGCACAAACAAGATAATCTCGTTT 57.688 33.333 0.00 0.00 0.00 3.60
2723 3064 3.825908 AGGTTTCTGCCTATTTTCCCA 57.174 42.857 0.00 0.00 37.04 4.37
2828 3170 2.559998 AAAACAAGTCCAGCACAACG 57.440 45.000 0.00 0.00 0.00 4.10
2890 3234 3.486383 ACACAACTGGAACAATAGTGGG 58.514 45.455 0.00 0.00 38.70 4.61
2971 3317 0.824109 AATCATCGTCCTTCTCGGCA 59.176 50.000 0.00 0.00 0.00 5.69
2986 3332 4.318332 TCTCGGCATGATATCCAAATCAC 58.682 43.478 0.00 0.00 38.65 3.06
2995 3341 5.316167 TGATATCCAAATCACTGGTATGCC 58.684 41.667 0.00 0.00 37.74 4.40
3101 3447 3.798337 GGACAAGCAACAAGACAATTGTG 59.202 43.478 17.58 4.25 31.44 3.33
3295 3643 4.651778 AGTTTACAACATCTGGCAGCTAA 58.348 39.130 10.34 0.00 0.00 3.09
3349 3697 1.066002 CCTTTGCACCAGTCACAACAG 59.934 52.381 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 6.319141 ACCGAAATTTCTTTCCTTTGAGAG 57.681 37.500 15.92 0.00 37.99 3.20
21 22 7.283580 TGTTACCGAAATTTCTTTCCTTTGAGA 59.716 33.333 15.92 0.00 37.99 3.27
22 23 7.378728 GTGTTACCGAAATTTCTTTCCTTTGAG 59.621 37.037 15.92 0.00 37.99 3.02
23 24 7.148052 TGTGTTACCGAAATTTCTTTCCTTTGA 60.148 33.333 15.92 0.00 37.99 2.69
24 25 6.975772 TGTGTTACCGAAATTTCTTTCCTTTG 59.024 34.615 15.92 0.00 37.99 2.77
25 26 7.102847 TGTGTTACCGAAATTTCTTTCCTTT 57.897 32.000 15.92 0.00 37.99 3.11
26 27 6.702716 TGTGTTACCGAAATTTCTTTCCTT 57.297 33.333 15.92 0.00 37.99 3.36
27 28 6.894339 ATGTGTTACCGAAATTTCTTTCCT 57.106 33.333 15.92 0.00 37.99 3.36
28 29 7.368059 AGAATGTGTTACCGAAATTTCTTTCC 58.632 34.615 15.92 1.57 37.99 3.13
29 30 8.073768 TGAGAATGTGTTACCGAAATTTCTTTC 58.926 33.333 15.92 3.86 37.90 2.62
30 31 7.936584 TGAGAATGTGTTACCGAAATTTCTTT 58.063 30.769 15.92 5.29 0.00 2.52
31 32 7.504924 TGAGAATGTGTTACCGAAATTTCTT 57.495 32.000 15.92 5.63 0.00 2.52
32 33 7.607991 AGATGAGAATGTGTTACCGAAATTTCT 59.392 33.333 15.92 1.07 0.00 2.52
33 34 7.752695 AGATGAGAATGTGTTACCGAAATTTC 58.247 34.615 8.20 8.20 0.00 2.17
34 35 7.148239 GGAGATGAGAATGTGTTACCGAAATTT 60.148 37.037 0.00 0.00 0.00 1.82
35 36 6.316390 GGAGATGAGAATGTGTTACCGAAATT 59.684 38.462 0.00 0.00 0.00 1.82
36 37 5.817816 GGAGATGAGAATGTGTTACCGAAAT 59.182 40.000 0.00 0.00 0.00 2.17
37 38 5.175859 GGAGATGAGAATGTGTTACCGAAA 58.824 41.667 0.00 0.00 0.00 3.46
38 39 4.221924 TGGAGATGAGAATGTGTTACCGAA 59.778 41.667 0.00 0.00 0.00 4.30
39 40 3.767131 TGGAGATGAGAATGTGTTACCGA 59.233 43.478 0.00 0.00 0.00 4.69
40 41 4.123497 TGGAGATGAGAATGTGTTACCG 57.877 45.455 0.00 0.00 0.00 4.02
41 42 4.747108 CGATGGAGATGAGAATGTGTTACC 59.253 45.833 0.00 0.00 0.00 2.85
42 43 4.747108 CCGATGGAGATGAGAATGTGTTAC 59.253 45.833 0.00 0.00 0.00 2.50
43 44 4.405680 ACCGATGGAGATGAGAATGTGTTA 59.594 41.667 0.00 0.00 0.00 2.41
44 45 3.198635 ACCGATGGAGATGAGAATGTGTT 59.801 43.478 0.00 0.00 0.00 3.32
45 46 2.768527 ACCGATGGAGATGAGAATGTGT 59.231 45.455 0.00 0.00 0.00 3.72
46 47 3.465742 ACCGATGGAGATGAGAATGTG 57.534 47.619 0.00 0.00 0.00 3.21
47 48 3.181461 GGAACCGATGGAGATGAGAATGT 60.181 47.826 0.00 0.00 0.00 2.71
48 49 3.181462 TGGAACCGATGGAGATGAGAATG 60.181 47.826 0.00 0.00 0.00 2.67
49 50 3.041211 TGGAACCGATGGAGATGAGAAT 58.959 45.455 0.00 0.00 0.00 2.40
50 51 2.466846 TGGAACCGATGGAGATGAGAA 58.533 47.619 0.00 0.00 0.00 2.87
51 52 2.159179 TGGAACCGATGGAGATGAGA 57.841 50.000 0.00 0.00 0.00 3.27
52 53 3.482156 AATGGAACCGATGGAGATGAG 57.518 47.619 0.00 0.00 0.00 2.90
53 54 3.054434 ACAAATGGAACCGATGGAGATGA 60.054 43.478 0.00 0.00 0.00 2.92
54 55 3.065786 CACAAATGGAACCGATGGAGATG 59.934 47.826 0.00 0.00 0.00 2.90
55 56 3.282021 CACAAATGGAACCGATGGAGAT 58.718 45.455 0.00 0.00 0.00 2.75
56 57 2.710377 CACAAATGGAACCGATGGAGA 58.290 47.619 0.00 0.00 0.00 3.71
69 70 8.970859 ATAAAGGAGAGAGATAACCACAAATG 57.029 34.615 0.00 0.00 0.00 2.32
70 71 9.981460 AAATAAAGGAGAGAGATAACCACAAAT 57.019 29.630 0.00 0.00 0.00 2.32
71 72 9.807921 AAAATAAAGGAGAGAGATAACCACAAA 57.192 29.630 0.00 0.00 0.00 2.83
72 73 9.231297 CAAAATAAAGGAGAGAGATAACCACAA 57.769 33.333 0.00 0.00 0.00 3.33
73 74 8.383175 ACAAAATAAAGGAGAGAGATAACCACA 58.617 33.333 0.00 0.00 0.00 4.17
74 75 8.669243 CACAAAATAAAGGAGAGAGATAACCAC 58.331 37.037 0.00 0.00 0.00 4.16
75 76 7.336931 GCACAAAATAAAGGAGAGAGATAACCA 59.663 37.037 0.00 0.00 0.00 3.67
76 77 7.336931 TGCACAAAATAAAGGAGAGAGATAACC 59.663 37.037 0.00 0.00 0.00 2.85
77 78 8.268850 TGCACAAAATAAAGGAGAGAGATAAC 57.731 34.615 0.00 0.00 0.00 1.89
78 79 8.862325 TTGCACAAAATAAAGGAGAGAGATAA 57.138 30.769 0.00 0.00 0.00 1.75
79 80 8.730680 GTTTGCACAAAATAAAGGAGAGAGATA 58.269 33.333 0.00 0.00 31.33 1.98
80 81 7.449704 AGTTTGCACAAAATAAAGGAGAGAGAT 59.550 33.333 0.00 0.00 31.33 2.75
81 82 6.772716 AGTTTGCACAAAATAAAGGAGAGAGA 59.227 34.615 0.00 0.00 31.33 3.10
82 83 6.974965 AGTTTGCACAAAATAAAGGAGAGAG 58.025 36.000 0.00 0.00 31.33 3.20
83 84 6.959639 AGTTTGCACAAAATAAAGGAGAGA 57.040 33.333 0.00 0.00 31.33 3.10
84 85 9.132521 CAATAGTTTGCACAAAATAAAGGAGAG 57.867 33.333 7.29 0.00 35.02 3.20
85 86 8.637986 ACAATAGTTTGCACAAAATAAAGGAGA 58.362 29.630 7.29 0.00 35.02 3.71
86 87 8.816640 ACAATAGTTTGCACAAAATAAAGGAG 57.183 30.769 7.29 0.54 35.02 3.69
87 88 9.039870 CAACAATAGTTTGCACAAAATAAAGGA 57.960 29.630 7.29 0.00 35.02 3.36
88 89 8.825745 ACAACAATAGTTTGCACAAAATAAAGG 58.174 29.630 7.29 3.62 35.02 3.11
89 90 9.635632 CACAACAATAGTTTGCACAAAATAAAG 57.364 29.630 7.29 5.94 35.02 1.85
90 91 9.155975 ACACAACAATAGTTTGCACAAAATAAA 57.844 25.926 7.29 0.00 35.02 1.40
91 92 8.709386 ACACAACAATAGTTTGCACAAAATAA 57.291 26.923 7.29 0.00 35.02 1.40
92 93 8.598924 CAACACAACAATAGTTTGCACAAAATA 58.401 29.630 5.83 5.83 35.28 1.40
93 94 7.118971 ACAACACAACAATAGTTTGCACAAAAT 59.881 29.630 1.46 1.46 35.28 1.82
94 95 6.425114 ACAACACAACAATAGTTTGCACAAAA 59.575 30.769 0.00 0.00 35.28 2.44
95 96 5.928839 ACAACACAACAATAGTTTGCACAAA 59.071 32.000 0.00 0.00 35.28 2.83
96 97 5.473931 ACAACACAACAATAGTTTGCACAA 58.526 33.333 0.00 0.00 35.28 3.33
97 98 5.065704 ACAACACAACAATAGTTTGCACA 57.934 34.783 0.00 0.00 35.28 4.57
98 99 6.915300 TGATACAACACAACAATAGTTTGCAC 59.085 34.615 0.00 0.00 35.28 4.57
99 100 7.032377 TGATACAACACAACAATAGTTTGCA 57.968 32.000 0.00 0.00 35.28 4.08
100 101 8.519492 AATGATACAACACAACAATAGTTTGC 57.481 30.769 0.00 0.00 35.28 3.68
102 103 8.977505 GCAAATGATACAACACAACAATAGTTT 58.022 29.630 0.00 0.00 35.28 2.66
103 104 8.359642 AGCAAATGATACAACACAACAATAGTT 58.640 29.630 0.00 0.00 38.88 2.24
104 105 7.885297 AGCAAATGATACAACACAACAATAGT 58.115 30.769 0.00 0.00 0.00 2.12
105 106 8.641155 CAAGCAAATGATACAACACAACAATAG 58.359 33.333 0.00 0.00 0.00 1.73
106 107 7.116090 GCAAGCAAATGATACAACACAACAATA 59.884 33.333 0.00 0.00 0.00 1.90
107 108 6.073657 GCAAGCAAATGATACAACACAACAAT 60.074 34.615 0.00 0.00 0.00 2.71
108 109 5.233902 GCAAGCAAATGATACAACACAACAA 59.766 36.000 0.00 0.00 0.00 2.83
109 110 4.744137 GCAAGCAAATGATACAACACAACA 59.256 37.500 0.00 0.00 0.00 3.33
110 111 4.744137 TGCAAGCAAATGATACAACACAAC 59.256 37.500 0.00 0.00 0.00 3.32
111 112 4.744137 GTGCAAGCAAATGATACAACACAA 59.256 37.500 0.00 0.00 0.00 3.33
112 113 4.037803 AGTGCAAGCAAATGATACAACACA 59.962 37.500 0.00 0.00 0.00 3.72
113 114 4.549458 AGTGCAAGCAAATGATACAACAC 58.451 39.130 0.00 0.00 0.00 3.32
114 115 4.852134 AGTGCAAGCAAATGATACAACA 57.148 36.364 0.00 0.00 0.00 3.33
115 116 4.984161 ACAAGTGCAAGCAAATGATACAAC 59.016 37.500 13.25 0.00 0.00 3.32
116 117 5.199024 ACAAGTGCAAGCAAATGATACAA 57.801 34.783 13.25 0.00 0.00 2.41
117 118 4.852134 ACAAGTGCAAGCAAATGATACA 57.148 36.364 13.25 0.00 0.00 2.29
118 119 4.984161 ACAACAAGTGCAAGCAAATGATAC 59.016 37.500 13.25 0.00 0.00 2.24
119 120 5.199024 ACAACAAGTGCAAGCAAATGATA 57.801 34.783 13.25 0.00 0.00 2.15
120 121 4.062677 ACAACAAGTGCAAGCAAATGAT 57.937 36.364 13.25 1.50 0.00 2.45
121 122 3.523606 ACAACAAGTGCAAGCAAATGA 57.476 38.095 13.25 0.00 0.00 2.57
122 123 3.371591 ACAACAACAAGTGCAAGCAAATG 59.628 39.130 0.00 1.53 0.00 2.32
123 124 3.598299 ACAACAACAAGTGCAAGCAAAT 58.402 36.364 0.00 0.00 0.00 2.32
124 125 3.037431 ACAACAACAAGTGCAAGCAAA 57.963 38.095 0.00 0.00 0.00 3.68
125 126 2.735663 CAACAACAACAAGTGCAAGCAA 59.264 40.909 0.00 0.00 0.00 3.91
126 127 2.288702 ACAACAACAACAAGTGCAAGCA 60.289 40.909 0.00 0.00 0.00 3.91
127 128 2.336667 ACAACAACAACAAGTGCAAGC 58.663 42.857 0.00 0.00 0.00 4.01
128 129 4.031652 GCTAACAACAACAACAAGTGCAAG 59.968 41.667 0.00 0.00 0.00 4.01
129 130 3.923461 GCTAACAACAACAACAAGTGCAA 59.077 39.130 0.00 0.00 0.00 4.08
130 131 3.057245 TGCTAACAACAACAACAAGTGCA 60.057 39.130 0.00 0.00 0.00 4.57
131 132 3.506810 TGCTAACAACAACAACAAGTGC 58.493 40.909 0.00 0.00 0.00 4.40
132 133 5.339177 TGATGCTAACAACAACAACAAGTG 58.661 37.500 0.00 0.00 0.00 3.16
133 134 5.574891 TGATGCTAACAACAACAACAAGT 57.425 34.783 0.00 0.00 0.00 3.16
134 135 9.494479 CTATATGATGCTAACAACAACAACAAG 57.506 33.333 0.00 0.00 31.76 3.16
135 136 8.458052 CCTATATGATGCTAACAACAACAACAA 58.542 33.333 0.00 0.00 31.76 2.83
136 137 7.609918 ACCTATATGATGCTAACAACAACAACA 59.390 33.333 0.00 0.00 31.76 3.33
137 138 7.985476 ACCTATATGATGCTAACAACAACAAC 58.015 34.615 0.00 0.00 31.76 3.32
138 139 8.458052 CAACCTATATGATGCTAACAACAACAA 58.542 33.333 0.00 0.00 31.76 2.83
139 140 7.609918 ACAACCTATATGATGCTAACAACAACA 59.390 33.333 0.00 0.00 31.76 3.33
140 141 7.985476 ACAACCTATATGATGCTAACAACAAC 58.015 34.615 0.00 0.00 31.76 3.32
141 142 8.574251 AACAACCTATATGATGCTAACAACAA 57.426 30.769 0.00 0.00 31.76 2.83
142 143 7.826744 TGAACAACCTATATGATGCTAACAACA 59.173 33.333 0.00 0.00 32.62 3.33
143 144 8.122952 GTGAACAACCTATATGATGCTAACAAC 58.877 37.037 0.00 0.00 0.00 3.32
144 145 7.282224 GGTGAACAACCTATATGATGCTAACAA 59.718 37.037 0.00 0.00 46.55 2.83
145 146 6.765989 GGTGAACAACCTATATGATGCTAACA 59.234 38.462 0.00 0.00 46.55 2.41
146 147 7.190920 GGTGAACAACCTATATGATGCTAAC 57.809 40.000 0.00 0.00 46.55 2.34
160 161 2.294074 TGTGCAACTAGGTGAACAACC 58.706 47.619 19.84 0.00 44.11 3.77
161 162 3.815401 AGATGTGCAACTAGGTGAACAAC 59.185 43.478 25.49 22.09 40.52 3.32
162 163 4.085357 AGATGTGCAACTAGGTGAACAA 57.915 40.909 25.49 9.42 40.52 2.83
163 164 3.769739 AGATGTGCAACTAGGTGAACA 57.230 42.857 24.04 24.04 41.40 3.18
164 165 4.865365 GTCTAGATGTGCAACTAGGTGAAC 59.135 45.833 12.45 12.45 38.04 3.18
165 166 4.526650 TGTCTAGATGTGCAACTAGGTGAA 59.473 41.667 13.29 0.00 38.04 3.18
166 167 4.086457 TGTCTAGATGTGCAACTAGGTGA 58.914 43.478 13.29 0.00 38.04 4.02
167 168 4.456280 TGTCTAGATGTGCAACTAGGTG 57.544 45.455 2.45 2.45 38.04 4.00
168 169 4.322801 GGTTGTCTAGATGTGCAACTAGGT 60.323 45.833 18.23 0.00 40.49 3.08
169 170 4.081420 AGGTTGTCTAGATGTGCAACTAGG 60.081 45.833 18.23 5.89 40.49 3.02
170 171 5.078411 AGGTTGTCTAGATGTGCAACTAG 57.922 43.478 18.23 14.00 40.49 2.57
171 172 6.791867 ATAGGTTGTCTAGATGTGCAACTA 57.208 37.500 18.23 11.63 40.49 2.24
172 173 5.683876 ATAGGTTGTCTAGATGTGCAACT 57.316 39.130 18.23 10.35 40.49 3.16
173 174 6.743575 AAATAGGTTGTCTAGATGTGCAAC 57.256 37.500 13.07 13.07 40.08 4.17
174 175 8.892723 CAATAAATAGGTTGTCTAGATGTGCAA 58.107 33.333 0.00 0.00 0.00 4.08
175 176 7.012327 GCAATAAATAGGTTGTCTAGATGTGCA 59.988 37.037 0.00 0.00 0.00 4.57
176 177 7.227512 AGCAATAAATAGGTTGTCTAGATGTGC 59.772 37.037 0.00 0.00 0.00 4.57
177 178 8.668510 AGCAATAAATAGGTTGTCTAGATGTG 57.331 34.615 0.00 0.00 0.00 3.21
199 200 9.389570 GCTTTTCTTCGTAAATTAAGTTTAGCA 57.610 29.630 0.00 0.00 33.11 3.49
200 201 9.608617 AGCTTTTCTTCGTAAATTAAGTTTAGC 57.391 29.630 0.00 0.00 33.11 3.09
214 215 9.233232 CAACTAACAATTTTAGCTTTTCTTCGT 57.767 29.630 0.00 0.00 0.00 3.85
215 216 8.207906 GCAACTAACAATTTTAGCTTTTCTTCG 58.792 33.333 0.00 0.00 0.00 3.79
216 217 8.487970 GGCAACTAACAATTTTAGCTTTTCTTC 58.512 33.333 0.00 0.00 0.00 2.87
217 218 8.365399 GGCAACTAACAATTTTAGCTTTTCTT 57.635 30.769 0.00 0.00 0.00 2.52
218 219 7.946655 GGCAACTAACAATTTTAGCTTTTCT 57.053 32.000 0.00 0.00 0.00 2.52
237 238 1.285078 AGGGAAGGGTGAATAGGCAAC 59.715 52.381 0.00 0.00 0.00 4.17
238 239 1.681229 AGGGAAGGGTGAATAGGCAA 58.319 50.000 0.00 0.00 0.00 4.52
239 240 2.579624 TAGGGAAGGGTGAATAGGCA 57.420 50.000 0.00 0.00 0.00 4.75
240 241 3.394606 TGATTAGGGAAGGGTGAATAGGC 59.605 47.826 0.00 0.00 0.00 3.93
241 242 5.646692 TTGATTAGGGAAGGGTGAATAGG 57.353 43.478 0.00 0.00 0.00 2.57
242 243 6.841601 TGATTGATTAGGGAAGGGTGAATAG 58.158 40.000 0.00 0.00 0.00 1.73
243 244 6.840090 TGATTGATTAGGGAAGGGTGAATA 57.160 37.500 0.00 0.00 0.00 1.75
244 245 5.732331 TGATTGATTAGGGAAGGGTGAAT 57.268 39.130 0.00 0.00 0.00 2.57
245 246 5.732331 ATGATTGATTAGGGAAGGGTGAA 57.268 39.130 0.00 0.00 0.00 3.18
246 247 6.295859 CGATATGATTGATTAGGGAAGGGTGA 60.296 42.308 0.00 0.00 0.00 4.02
247 248 5.877012 CGATATGATTGATTAGGGAAGGGTG 59.123 44.000 0.00 0.00 0.00 4.61
248 249 5.785423 TCGATATGATTGATTAGGGAAGGGT 59.215 40.000 0.00 0.00 0.00 4.34
249 250 6.299805 TCGATATGATTGATTAGGGAAGGG 57.700 41.667 0.00 0.00 0.00 3.95
250 251 6.989169 GGATCGATATGATTGATTAGGGAAGG 59.011 42.308 0.00 0.00 37.47 3.46
251 252 7.790027 AGGATCGATATGATTGATTAGGGAAG 58.210 38.462 0.00 0.00 37.47 3.46
252 253 7.739995 AGGATCGATATGATTGATTAGGGAA 57.260 36.000 0.00 0.00 37.47 3.97
253 254 7.739995 AAGGATCGATATGATTGATTAGGGA 57.260 36.000 0.00 0.00 37.47 4.20
254 255 8.043113 TGAAAGGATCGATATGATTGATTAGGG 58.957 37.037 0.00 0.00 37.47 3.53
255 256 9.610705 ATGAAAGGATCGATATGATTGATTAGG 57.389 33.333 0.00 0.00 37.47 2.69
261 262 9.499585 GCATTTATGAAAGGATCGATATGATTG 57.500 33.333 0.00 0.00 37.47 2.67
262 263 8.680903 GGCATTTATGAAAGGATCGATATGATT 58.319 33.333 0.00 0.00 37.47 2.57
263 264 8.051535 AGGCATTTATGAAAGGATCGATATGAT 58.948 33.333 0.00 0.00 41.06 2.45
264 265 7.397221 AGGCATTTATGAAAGGATCGATATGA 58.603 34.615 0.00 0.00 0.00 2.15
265 266 7.621428 AGGCATTTATGAAAGGATCGATATG 57.379 36.000 0.00 0.00 0.00 1.78
266 267 9.739276 TTTAGGCATTTATGAAAGGATCGATAT 57.261 29.630 0.00 0.00 0.00 1.63
267 268 9.567776 TTTTAGGCATTTATGAAAGGATCGATA 57.432 29.630 0.00 0.00 0.00 2.92
268 269 8.463930 TTTTAGGCATTTATGAAAGGATCGAT 57.536 30.769 0.00 0.00 0.00 3.59
269 270 7.873719 TTTTAGGCATTTATGAAAGGATCGA 57.126 32.000 0.00 0.00 0.00 3.59
291 292 1.609208 AGCATGACACGCCTCTTTTT 58.391 45.000 0.00 0.00 0.00 1.94
292 293 1.609208 AAGCATGACACGCCTCTTTT 58.391 45.000 0.00 0.00 0.00 2.27
293 294 1.609208 AAAGCATGACACGCCTCTTT 58.391 45.000 0.00 0.00 0.00 2.52
294 295 1.609208 AAAAGCATGACACGCCTCTT 58.391 45.000 0.00 0.00 0.00 2.85
295 296 2.472695 TAAAAGCATGACACGCCTCT 57.527 45.000 0.00 0.00 0.00 3.69
296 297 2.742053 TCTTAAAAGCATGACACGCCTC 59.258 45.455 0.00 0.00 0.00 4.70
297 298 2.484264 GTCTTAAAAGCATGACACGCCT 59.516 45.455 0.00 0.00 0.00 5.52
298 299 2.724839 CGTCTTAAAAGCATGACACGCC 60.725 50.000 0.00 0.00 0.00 5.68
299 300 2.495939 CGTCTTAAAAGCATGACACGC 58.504 47.619 0.00 0.00 0.00 5.34
300 301 2.495939 GCGTCTTAAAAGCATGACACG 58.504 47.619 0.00 0.00 32.01 4.49
301 302 2.484264 AGGCGTCTTAAAAGCATGACAC 59.516 45.455 0.00 0.00 33.55 3.67
302 303 2.778299 AGGCGTCTTAAAAGCATGACA 58.222 42.857 0.00 0.00 33.55 3.58
303 304 4.392138 AGTTAGGCGTCTTAAAAGCATGAC 59.608 41.667 0.00 0.00 33.94 3.06
304 305 4.391830 CAGTTAGGCGTCTTAAAAGCATGA 59.608 41.667 0.00 0.00 33.55 3.07
305 306 4.154195 ACAGTTAGGCGTCTTAAAAGCATG 59.846 41.667 0.00 0.00 33.55 4.06
306 307 4.324267 ACAGTTAGGCGTCTTAAAAGCAT 58.676 39.130 0.00 0.00 33.55 3.79
307 308 3.735591 ACAGTTAGGCGTCTTAAAAGCA 58.264 40.909 0.00 0.00 33.55 3.91
308 309 5.579511 TCATACAGTTAGGCGTCTTAAAAGC 59.420 40.000 0.00 0.00 0.00 3.51
309 310 7.277981 ACATCATACAGTTAGGCGTCTTAAAAG 59.722 37.037 0.00 0.00 0.00 2.27
310 311 7.064134 CACATCATACAGTTAGGCGTCTTAAAA 59.936 37.037 0.00 0.00 0.00 1.52
311 312 6.533723 CACATCATACAGTTAGGCGTCTTAAA 59.466 38.462 0.00 0.00 0.00 1.52
312 313 6.040247 CACATCATACAGTTAGGCGTCTTAA 58.960 40.000 0.00 0.00 0.00 1.85
313 314 5.358725 TCACATCATACAGTTAGGCGTCTTA 59.641 40.000 0.00 0.00 0.00 2.10
314 315 4.159693 TCACATCATACAGTTAGGCGTCTT 59.840 41.667 0.00 0.00 0.00 3.01
315 316 3.699538 TCACATCATACAGTTAGGCGTCT 59.300 43.478 0.00 0.00 0.00 4.18
316 317 4.041740 TCACATCATACAGTTAGGCGTC 57.958 45.455 0.00 0.00 0.00 5.19
317 318 4.672587 ATCACATCATACAGTTAGGCGT 57.327 40.909 0.00 0.00 0.00 5.68
318 319 5.773575 ACTATCACATCATACAGTTAGGCG 58.226 41.667 0.00 0.00 0.00 5.52
319 320 9.542462 TTTTACTATCACATCATACAGTTAGGC 57.458 33.333 0.00 0.00 0.00 3.93
328 329 9.150348 CGGCATATGTTTTACTATCACATCATA 57.850 33.333 4.29 0.00 33.19 2.15
329 330 7.361201 GCGGCATATGTTTTACTATCACATCAT 60.361 37.037 4.29 0.00 33.19 2.45
330 331 6.073276 GCGGCATATGTTTTACTATCACATCA 60.073 38.462 4.29 0.00 33.19 3.07
331 332 6.307155 GCGGCATATGTTTTACTATCACATC 58.693 40.000 4.29 0.00 33.19 3.06
332 333 5.107104 CGCGGCATATGTTTTACTATCACAT 60.107 40.000 4.29 0.00 35.33 3.21
333 334 4.210328 CGCGGCATATGTTTTACTATCACA 59.790 41.667 4.29 0.00 0.00 3.58
334 335 4.210537 ACGCGGCATATGTTTTACTATCAC 59.789 41.667 12.47 0.00 0.00 3.06
335 336 4.373527 ACGCGGCATATGTTTTACTATCA 58.626 39.130 12.47 0.00 0.00 2.15
336 337 4.684703 AGACGCGGCATATGTTTTACTATC 59.315 41.667 17.71 0.00 0.00 2.08
337 338 4.628074 AGACGCGGCATATGTTTTACTAT 58.372 39.130 17.71 0.00 0.00 2.12
338 339 4.049546 AGACGCGGCATATGTTTTACTA 57.950 40.909 17.71 0.00 0.00 1.82
339 340 2.901249 AGACGCGGCATATGTTTTACT 58.099 42.857 17.71 0.00 0.00 2.24
340 341 3.668596 AAGACGCGGCATATGTTTTAC 57.331 42.857 17.71 0.00 0.00 2.01
341 342 4.435425 ACTAAGACGCGGCATATGTTTTA 58.565 39.130 17.71 0.15 0.00 1.52
342 343 3.267483 ACTAAGACGCGGCATATGTTTT 58.733 40.909 17.71 0.00 0.00 2.43
343 344 2.901249 ACTAAGACGCGGCATATGTTT 58.099 42.857 17.71 0.00 0.00 2.83
344 345 2.596904 ACTAAGACGCGGCATATGTT 57.403 45.000 17.71 0.36 0.00 2.71
345 346 3.005472 ACATACTAAGACGCGGCATATGT 59.995 43.478 17.71 18.83 0.00 2.29
346 347 3.575630 ACATACTAAGACGCGGCATATG 58.424 45.455 17.71 18.16 0.00 1.78
347 348 3.936372 ACATACTAAGACGCGGCATAT 57.064 42.857 17.71 3.14 0.00 1.78
348 349 3.817084 ACTACATACTAAGACGCGGCATA 59.183 43.478 17.71 5.44 0.00 3.14
349 350 2.621998 ACTACATACTAAGACGCGGCAT 59.378 45.455 17.71 4.02 0.00 4.40
350 351 2.019249 ACTACATACTAAGACGCGGCA 58.981 47.619 17.71 0.00 0.00 5.69
351 352 2.382519 CACTACATACTAAGACGCGGC 58.617 52.381 12.47 7.86 0.00 6.53
352 353 2.382519 GCACTACATACTAAGACGCGG 58.617 52.381 12.47 0.00 0.00 6.46
353 354 2.034789 CGCACTACATACTAAGACGCG 58.965 52.381 3.53 3.53 34.06 6.01
354 355 3.062323 ACGCACTACATACTAAGACGC 57.938 47.619 0.00 0.00 0.00 5.19
355 356 5.203370 CCTAACGCACTACATACTAAGACG 58.797 45.833 0.00 0.00 0.00 4.18
356 357 4.974888 GCCTAACGCACTACATACTAAGAC 59.025 45.833 0.00 0.00 37.47 3.01
357 358 4.037208 GGCCTAACGCACTACATACTAAGA 59.963 45.833 0.00 0.00 40.31 2.10
358 359 4.296690 GGCCTAACGCACTACATACTAAG 58.703 47.826 0.00 0.00 40.31 2.18
359 360 3.243168 CGGCCTAACGCACTACATACTAA 60.243 47.826 0.00 0.00 40.31 2.24
360 361 2.291465 CGGCCTAACGCACTACATACTA 59.709 50.000 0.00 0.00 40.31 1.82
361 362 1.066605 CGGCCTAACGCACTACATACT 59.933 52.381 0.00 0.00 40.31 2.12
362 363 1.484356 CGGCCTAACGCACTACATAC 58.516 55.000 0.00 0.00 40.31 2.39
363 364 0.386476 CCGGCCTAACGCACTACATA 59.614 55.000 0.00 0.00 40.31 2.29
364 365 1.143183 CCGGCCTAACGCACTACAT 59.857 57.895 0.00 0.00 40.31 2.29
365 366 2.574929 CCGGCCTAACGCACTACA 59.425 61.111 0.00 0.00 40.31 2.74
366 367 2.889018 GCCGGCCTAACGCACTAC 60.889 66.667 18.11 0.00 40.31 2.73
367 368 4.501714 CGCCGGCCTAACGCACTA 62.502 66.667 23.46 0.00 40.31 2.74
385 386 2.677003 GGTCACGCCGTCAATGTGG 61.677 63.158 0.00 0.00 34.43 4.17
386 387 1.502990 TTGGTCACGCCGTCAATGTG 61.503 55.000 0.00 0.00 41.21 3.21
387 388 1.227704 TTGGTCACGCCGTCAATGT 60.228 52.632 0.00 0.00 41.21 2.71
388 389 1.206578 GTTGGTCACGCCGTCAATG 59.793 57.895 0.00 0.00 41.21 2.82
389 390 2.314647 CGTTGGTCACGCCGTCAAT 61.315 57.895 0.00 0.00 43.37 2.57
390 391 2.962786 CGTTGGTCACGCCGTCAA 60.963 61.111 0.00 0.00 43.37 3.18
402 403 2.943653 GCCTTTGACCGTCGTTGG 59.056 61.111 0.00 0.00 0.00 3.77
403 404 2.549282 CGCCTTTGACCGTCGTTG 59.451 61.111 0.00 0.00 0.00 4.10
404 405 3.343421 GCGCCTTTGACCGTCGTT 61.343 61.111 0.00 0.00 0.00 3.85
407 408 2.668550 AAGGCGCCTTTGACCGTC 60.669 61.111 35.84 0.00 31.29 4.79
408 409 2.978010 CAAGGCGCCTTTGACCGT 60.978 61.111 38.60 14.61 33.42 4.83
439 440 2.443887 TAGGCACCAACTTACACGTC 57.556 50.000 0.00 0.00 0.00 4.34
440 441 2.486918 GTTAGGCACCAACTTACACGT 58.513 47.619 0.00 0.00 0.00 4.49
441 442 1.458064 CGTTAGGCACCAACTTACACG 59.542 52.381 0.00 0.00 0.00 4.49
442 443 1.802365 CCGTTAGGCACCAACTTACAC 59.198 52.381 0.00 0.00 0.00 2.90
443 444 2.172851 CCGTTAGGCACCAACTTACA 57.827 50.000 0.00 0.00 0.00 2.41
467 470 3.554692 CGTCTGACCCATTCGCGC 61.555 66.667 0.00 0.00 0.00 6.86
470 473 0.109458 TTCGTCGTCTGACCCATTCG 60.109 55.000 1.55 1.08 42.37 3.34
476 479 5.587033 AAAACTTATTTCGTCGTCTGACC 57.413 39.130 1.55 0.00 42.37 4.02
480 483 5.178809 CCCTCAAAAACTTATTTCGTCGTCT 59.821 40.000 0.00 0.00 0.00 4.18
513 516 3.504863 TCACTGGACGTACTTATTTCGC 58.495 45.455 0.00 0.00 0.00 4.70
554 557 6.819146 GGTCTTATAAAAGTGAACAGAGGGAG 59.181 42.308 0.00 0.00 34.13 4.30
555 558 6.500751 AGGTCTTATAAAAGTGAACAGAGGGA 59.499 38.462 0.00 0.00 34.13 4.20
556 559 6.712276 AGGTCTTATAAAAGTGAACAGAGGG 58.288 40.000 0.00 0.00 34.13 4.30
557 560 7.878127 TCAAGGTCTTATAAAAGTGAACAGAGG 59.122 37.037 0.00 0.00 34.13 3.69
558 561 8.833231 TCAAGGTCTTATAAAAGTGAACAGAG 57.167 34.615 0.00 0.00 34.13 3.35
559 562 9.273016 CTTCAAGGTCTTATAAAAGTGAACAGA 57.727 33.333 0.00 0.00 34.13 3.41
560 563 9.273016 TCTTCAAGGTCTTATAAAAGTGAACAG 57.727 33.333 0.00 0.00 34.13 3.16
561 564 9.052759 GTCTTCAAGGTCTTATAAAAGTGAACA 57.947 33.333 0.00 0.00 34.13 3.18
562 565 9.052759 TGTCTTCAAGGTCTTATAAAAGTGAAC 57.947 33.333 0.00 0.00 34.13 3.18
563 566 9.793259 ATGTCTTCAAGGTCTTATAAAAGTGAA 57.207 29.630 0.00 0.00 34.13 3.18
564 567 9.793259 AATGTCTTCAAGGTCTTATAAAAGTGA 57.207 29.630 0.00 0.00 34.13 3.41
570 573 9.436957 GTCTGAAATGTCTTCAAGGTCTTATAA 57.563 33.333 0.00 0.00 0.00 0.98
571 574 8.593679 TGTCTGAAATGTCTTCAAGGTCTTATA 58.406 33.333 0.00 0.00 0.00 0.98
572 575 7.453393 TGTCTGAAATGTCTTCAAGGTCTTAT 58.547 34.615 0.00 0.00 0.00 1.73
573 576 6.826668 TGTCTGAAATGTCTTCAAGGTCTTA 58.173 36.000 0.00 0.00 0.00 2.10
574 577 5.684704 TGTCTGAAATGTCTTCAAGGTCTT 58.315 37.500 0.00 0.00 0.00 3.01
575 578 5.296151 TGTCTGAAATGTCTTCAAGGTCT 57.704 39.130 0.00 0.00 0.00 3.85
576 579 6.016777 ACATTGTCTGAAATGTCTTCAAGGTC 60.017 38.462 10.41 0.00 45.47 3.85
577 580 5.829924 ACATTGTCTGAAATGTCTTCAAGGT 59.170 36.000 10.41 0.00 45.47 3.50
578 581 6.147581 CACATTGTCTGAAATGTCTTCAAGG 58.852 40.000 12.25 0.00 45.47 3.61
579 582 6.732154 ACACATTGTCTGAAATGTCTTCAAG 58.268 36.000 12.25 6.29 45.47 3.02
580 583 6.698008 ACACATTGTCTGAAATGTCTTCAA 57.302 33.333 12.25 0.00 45.47 2.69
581 584 7.800155 TTACACATTGTCTGAAATGTCTTCA 57.200 32.000 12.25 0.00 45.47 3.02
582 585 8.958043 GTTTTACACATTGTCTGAAATGTCTTC 58.042 33.333 12.25 0.00 45.47 2.87
583 586 8.465999 TGTTTTACACATTGTCTGAAATGTCTT 58.534 29.630 12.25 7.68 45.47 3.01
584 587 7.995289 TGTTTTACACATTGTCTGAAATGTCT 58.005 30.769 12.25 6.84 45.47 3.41
585 588 7.096477 GCTGTTTTACACATTGTCTGAAATGTC 60.096 37.037 12.25 5.04 45.47 3.06
587 590 6.144402 GGCTGTTTTACACATTGTCTGAAATG 59.856 38.462 9.50 9.50 42.21 2.32
588 591 6.040842 AGGCTGTTTTACACATTGTCTGAAAT 59.959 34.615 0.00 0.00 33.76 2.17
589 592 5.359576 AGGCTGTTTTACACATTGTCTGAAA 59.640 36.000 0.00 0.00 33.76 2.69
590 593 4.887071 AGGCTGTTTTACACATTGTCTGAA 59.113 37.500 0.00 0.00 33.76 3.02
591 594 4.460263 AGGCTGTTTTACACATTGTCTGA 58.540 39.130 0.00 0.00 33.76 3.27
592 595 4.836125 AGGCTGTTTTACACATTGTCTG 57.164 40.909 0.00 0.00 33.76 3.51
593 596 7.524717 AAATAGGCTGTTTTACACATTGTCT 57.475 32.000 3.12 0.00 33.76 3.41
594 597 7.865385 TCAAAATAGGCTGTTTTACACATTGTC 59.135 33.333 19.57 0.00 33.76 3.18
595 598 7.721402 TCAAAATAGGCTGTTTTACACATTGT 58.279 30.769 19.57 0.00 33.76 2.71
596 599 7.148755 GCTCAAAATAGGCTGTTTTACACATTG 60.149 37.037 19.57 8.44 33.76 2.82
597 600 6.868339 GCTCAAAATAGGCTGTTTTACACATT 59.132 34.615 19.57 0.00 33.76 2.71
598 601 6.209391 AGCTCAAAATAGGCTGTTTTACACAT 59.791 34.615 19.57 5.01 33.76 3.21
599 602 5.534654 AGCTCAAAATAGGCTGTTTTACACA 59.465 36.000 19.57 5.77 34.82 3.72
600 603 5.858581 CAGCTCAAAATAGGCTGTTTTACAC 59.141 40.000 19.57 12.31 45.59 2.90
601 604 6.012658 CAGCTCAAAATAGGCTGTTTTACA 57.987 37.500 19.57 9.97 45.59 2.41
609 612 3.988976 TCAGACAGCTCAAAATAGGCT 57.011 42.857 0.00 0.00 36.70 4.58
610 613 4.697352 TCTTTCAGACAGCTCAAAATAGGC 59.303 41.667 0.00 0.00 0.00 3.93
611 614 6.429385 AGTTCTTTCAGACAGCTCAAAATAGG 59.571 38.462 0.00 0.00 0.00 2.57
612 615 7.432350 AGTTCTTTCAGACAGCTCAAAATAG 57.568 36.000 0.00 0.00 0.00 1.73
613 616 7.807977 AAGTTCTTTCAGACAGCTCAAAATA 57.192 32.000 0.00 0.00 0.00 1.40
614 617 6.705863 AAGTTCTTTCAGACAGCTCAAAAT 57.294 33.333 0.00 0.00 0.00 1.82
615 618 6.597672 TGTAAGTTCTTTCAGACAGCTCAAAA 59.402 34.615 0.00 0.00 0.00 2.44
616 619 6.112734 TGTAAGTTCTTTCAGACAGCTCAAA 58.887 36.000 0.00 0.00 0.00 2.69
617 620 5.670485 TGTAAGTTCTTTCAGACAGCTCAA 58.330 37.500 0.00 0.00 0.00 3.02
618 621 5.276461 TGTAAGTTCTTTCAGACAGCTCA 57.724 39.130 0.00 0.00 0.00 4.26
619 622 6.604735 TTTGTAAGTTCTTTCAGACAGCTC 57.395 37.500 0.00 0.00 0.00 4.09
620 623 6.599638 ACTTTTGTAAGTTCTTTCAGACAGCT 59.400 34.615 0.00 0.00 41.85 4.24
621 624 6.688813 CACTTTTGTAAGTTCTTTCAGACAGC 59.311 38.462 0.00 0.00 41.85 4.40
622 625 7.974675 TCACTTTTGTAAGTTCTTTCAGACAG 58.025 34.615 0.00 0.00 41.85 3.51
623 626 7.915293 TCACTTTTGTAAGTTCTTTCAGACA 57.085 32.000 0.00 0.00 41.85 3.41
624 627 7.425595 CGTTCACTTTTGTAAGTTCTTTCAGAC 59.574 37.037 0.00 0.00 41.85 3.51
625 628 7.413657 CCGTTCACTTTTGTAAGTTCTTTCAGA 60.414 37.037 0.00 0.00 41.85 3.27
626 629 6.687105 CCGTTCACTTTTGTAAGTTCTTTCAG 59.313 38.462 0.00 0.00 41.85 3.02
627 630 6.372103 TCCGTTCACTTTTGTAAGTTCTTTCA 59.628 34.615 0.00 0.00 41.85 2.69
628 631 6.778108 TCCGTTCACTTTTGTAAGTTCTTTC 58.222 36.000 0.00 0.00 41.85 2.62
629 632 6.183360 CCTCCGTTCACTTTTGTAAGTTCTTT 60.183 38.462 0.00 0.00 41.85 2.52
630 633 5.296035 CCTCCGTTCACTTTTGTAAGTTCTT 59.704 40.000 0.00 0.00 41.85 2.52
631 634 4.814771 CCTCCGTTCACTTTTGTAAGTTCT 59.185 41.667 0.00 0.00 41.85 3.01
632 635 4.024302 CCCTCCGTTCACTTTTGTAAGTTC 60.024 45.833 0.00 0.00 41.85 3.01
633 636 3.881089 CCCTCCGTTCACTTTTGTAAGTT 59.119 43.478 0.00 0.00 41.85 2.66
634 637 3.118149 ACCCTCCGTTCACTTTTGTAAGT 60.118 43.478 0.00 0.00 45.40 2.24
635 638 3.250040 CACCCTCCGTTCACTTTTGTAAG 59.750 47.826 0.00 0.00 37.40 2.34
636 639 3.207778 CACCCTCCGTTCACTTTTGTAA 58.792 45.455 0.00 0.00 0.00 2.41
637 640 2.171027 ACACCCTCCGTTCACTTTTGTA 59.829 45.455 0.00 0.00 0.00 2.41
638 641 1.064979 ACACCCTCCGTTCACTTTTGT 60.065 47.619 0.00 0.00 0.00 2.83
639 642 1.675552 ACACCCTCCGTTCACTTTTG 58.324 50.000 0.00 0.00 0.00 2.44
640 643 2.486013 GGTACACCCTCCGTTCACTTTT 60.486 50.000 0.00 0.00 0.00 2.27
641 644 1.071228 GGTACACCCTCCGTTCACTTT 59.929 52.381 0.00 0.00 0.00 2.66
642 645 0.683412 GGTACACCCTCCGTTCACTT 59.317 55.000 0.00 0.00 0.00 3.16
643 646 0.470456 TGGTACACCCTCCGTTCACT 60.470 55.000 0.00 0.00 34.29 3.41
644 647 2.051941 TGGTACACCCTCCGTTCAC 58.948 57.895 0.00 0.00 34.29 3.18
645 648 4.623308 TGGTACACCCTCCGTTCA 57.377 55.556 0.00 0.00 34.29 3.18
657 660 1.153309 GGCACGGGTGGTATGGTAC 60.153 63.158 0.43 0.00 0.00 3.34
658 661 3.311725 GGCACGGGTGGTATGGTA 58.688 61.111 0.43 0.00 0.00 3.25
675 678 2.930040 ACAAATCTAGAATGCACGGACG 59.070 45.455 0.00 0.00 0.00 4.79
690 693 6.640518 TCTATCCTATCGCCCATTACAAATC 58.359 40.000 0.00 0.00 0.00 2.17
691 694 6.440647 TCTCTATCCTATCGCCCATTACAAAT 59.559 38.462 0.00 0.00 0.00 2.32
692 695 5.778241 TCTCTATCCTATCGCCCATTACAAA 59.222 40.000 0.00 0.00 0.00 2.83
693 696 5.330233 TCTCTATCCTATCGCCCATTACAA 58.670 41.667 0.00 0.00 0.00 2.41
694 697 4.930696 TCTCTATCCTATCGCCCATTACA 58.069 43.478 0.00 0.00 0.00 2.41
695 698 5.194432 TCTCTCTATCCTATCGCCCATTAC 58.806 45.833 0.00 0.00 0.00 1.89
696 699 5.452341 TCTCTCTATCCTATCGCCCATTA 57.548 43.478 0.00 0.00 0.00 1.90
697 700 4.323569 TCTCTCTATCCTATCGCCCATT 57.676 45.455 0.00 0.00 0.00 3.16
698 701 4.469657 GATCTCTCTATCCTATCGCCCAT 58.530 47.826 0.00 0.00 0.00 4.00
700 703 3.219281 GGATCTCTCTATCCTATCGCCC 58.781 54.545 0.00 0.00 41.99 6.13
703 875 5.949354 AGGTTTGGATCTCTCTATCCTATCG 59.051 44.000 4.63 0.00 44.98 2.92
714 886 6.550854 TGATTTGTTTTCAGGTTTGGATCTCT 59.449 34.615 0.00 0.00 0.00 3.10
818 990 3.521765 ATTTGAACCCGGGCTGCCA 62.522 57.895 24.08 10.73 0.00 4.92
1142 1466 1.541672 GGAGAGGGAGAGGGAGAGG 59.458 68.421 0.00 0.00 0.00 3.69
1334 1658 4.824515 AGAGAGGGAGCCGGACGG 62.825 72.222 5.05 6.35 38.57 4.79
1335 1659 1.889530 AAAAGAGAGGGAGCCGGACG 61.890 60.000 5.05 0.00 0.00 4.79
1336 1660 0.325272 AAAAAGAGAGGGAGCCGGAC 59.675 55.000 5.05 0.00 0.00 4.79
1337 1661 0.613777 GAAAAAGAGAGGGAGCCGGA 59.386 55.000 5.05 0.00 0.00 5.14
1338 1662 0.393132 GGAAAAAGAGAGGGAGCCGG 60.393 60.000 0.00 0.00 0.00 6.13
1339 1663 0.615850 AGGAAAAAGAGAGGGAGCCG 59.384 55.000 0.00 0.00 0.00 5.52
1340 1664 1.065053 GGAGGAAAAAGAGAGGGAGCC 60.065 57.143 0.00 0.00 0.00 4.70
1341 1665 1.630878 TGGAGGAAAAAGAGAGGGAGC 59.369 52.381 0.00 0.00 0.00 4.70
1342 1666 2.909662 AGTGGAGGAAAAAGAGAGGGAG 59.090 50.000 0.00 0.00 0.00 4.30
1353 1677 0.906282 GGTACGGGGAGTGGAGGAAA 60.906 60.000 0.00 0.00 0.00 3.13
1378 1702 0.250166 ACGGGAAGGAAAACACTCCG 60.250 55.000 0.00 0.00 40.75 4.63
1381 1705 2.817844 GCATTACGGGAAGGAAAACACT 59.182 45.455 0.00 0.00 0.00 3.55
1389 1713 2.631160 TACATGGCATTACGGGAAGG 57.369 50.000 0.00 0.00 0.00 3.46
1402 1726 4.070509 AGGACGGACCACCATTACATGG 62.071 54.545 0.00 0.92 45.69 3.66
1403 1727 1.209504 AGGACGGACCACCATTACATG 59.790 52.381 7.35 0.00 42.04 3.21
1404 1728 1.209504 CAGGACGGACCACCATTACAT 59.790 52.381 7.35 0.00 42.04 2.29
1422 1746 1.002868 CTCCTGACCTGCAACCCAG 60.003 63.158 0.00 0.00 41.41 4.45
1774 2102 0.036732 TCAAGAGCGGCCAAAGACAT 59.963 50.000 2.24 0.00 0.00 3.06
1800 2128 8.345724 AGATCTGCACATTTATATGGGAAATC 57.654 34.615 0.00 0.00 37.35 2.17
1808 2136 6.596309 TCTCGGAGATCTGCACATTTATAT 57.404 37.500 15.10 0.00 33.89 0.86
1817 2145 4.071423 CTCTATCTTCTCGGAGATCTGCA 58.929 47.826 15.10 0.92 37.54 4.41
1871 2199 4.499696 GCACAAACCTGCTCAGTTGTTATT 60.500 41.667 3.92 0.00 31.98 1.40
1891 2219 2.415512 GTCATCCGAGTGTAAAAGGCAC 59.584 50.000 0.00 0.00 37.13 5.01
1965 2296 1.278127 CCGAAGCTCCTCACCCTAAAA 59.722 52.381 0.00 0.00 0.00 1.52
1966 2297 0.902531 CCGAAGCTCCTCACCCTAAA 59.097 55.000 0.00 0.00 0.00 1.85
2120 2451 8.359642 TCTGTCAACAATTATCAAGGGAAAAAG 58.640 33.333 0.00 0.00 0.00 2.27
2184 2519 1.691196 TGTGCCTTTGAGGTTGAAGG 58.309 50.000 0.00 0.00 44.21 3.46
2309 2644 4.566004 ACGGAAATCAAGATGTCGAGAAA 58.434 39.130 0.00 0.00 0.00 2.52
2408 2743 1.590238 GCATCATGTCGAGGAAAGACG 59.410 52.381 0.00 0.00 41.24 4.18
2441 2776 1.463444 GTCCCATTTCGAGAACAACCG 59.537 52.381 0.00 0.00 0.00 4.44
2461 2796 3.599730 TGCTTCTACCATCACTGTCTG 57.400 47.619 0.00 0.00 0.00 3.51
2539 2874 0.842030 AGGATTCAGGGTGCTCCACA 60.842 55.000 7.20 0.00 35.86 4.17
2619 2959 7.310609 CCAAGGAGTGGGATATTTCAAATTTGT 60.311 37.037 17.47 1.67 44.64 2.83
2695 3036 2.656947 AGGCAGAAACCTTGTTAGCA 57.343 45.000 0.00 0.00 36.28 3.49
2696 3037 5.644977 AAATAGGCAGAAACCTTGTTAGC 57.355 39.130 0.00 0.00 41.50 3.09
2805 3147 1.134848 TGTGCTGGACTTGTTTTTGGC 60.135 47.619 0.00 0.00 0.00 4.52
2890 3234 0.606604 TAGGCGTCAGGAGGTTGTTC 59.393 55.000 0.00 0.00 0.00 3.18
2971 3317 5.948162 GGCATACCAGTGATTTGGATATCAT 59.052 40.000 4.83 0.00 40.87 2.45
2986 3332 3.609853 TCTGTTAAAGCAGGCATACCAG 58.390 45.455 0.00 0.00 39.06 4.00
2995 3341 9.387123 GAGTGAAATTTAACTCTGTTAAAGCAG 57.613 33.333 23.52 0.00 39.79 4.24
3295 3643 5.995897 GGTGGTAATATCGGCAGATTACTTT 59.004 40.000 4.22 0.00 38.20 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.