Multiple sequence alignment - TraesCS3A01G151400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G151400 chr3A 100.000 4080 0 0 1 4080 140808571 140804492 0.000000e+00 7535.0
1 TraesCS3A01G151400 chr3A 78.182 275 52 7 2720 2990 421719960 421719690 7.010000e-38 169.0
2 TraesCS3A01G151400 chr3D 91.331 2734 120 47 668 3326 129023937 129026628 0.000000e+00 3627.0
3 TraesCS3A01G151400 chr3D 90.574 679 42 9 3 669 129023240 129023908 0.000000e+00 880.0
4 TraesCS3A01G151400 chr3D 79.742 775 142 14 1877 2645 310683039 310683804 7.710000e-152 547.0
5 TraesCS3A01G151400 chr3D 78.039 255 52 4 2720 2972 310684034 310684286 1.520000e-34 158.0
6 TraesCS3A01G151400 chr3D 87.654 81 1 3 3338 3414 129026870 129026945 7.270000e-13 86.1
7 TraesCS3A01G151400 chr3D 97.727 44 1 0 3461 3504 129026946 129026989 4.370000e-10 76.8
8 TraesCS3A01G151400 chr3B 91.121 2748 133 46 668 3372 183082160 183084839 0.000000e+00 3620.0
9 TraesCS3A01G151400 chr3B 89.985 679 43 10 1 669 183081468 183082131 0.000000e+00 854.0
10 TraesCS3A01G151400 chr3B 79.521 752 139 14 1900 2645 410774942 410774200 4.670000e-144 521.0
11 TraesCS3A01G151400 chr3B 88.406 138 12 4 3460 3594 183084969 183085105 3.260000e-36 163.0
12 TraesCS3A01G151400 chr3B 77.455 275 54 7 2720 2990 410774098 410773828 1.520000e-34 158.0
13 TraesCS3A01G151400 chr1D 81.234 778 136 10 1870 2642 137968331 137967559 1.610000e-173 619.0
14 TraesCS3A01G151400 chr1A 80.922 781 137 12 1870 2644 154700612 154701386 1.250000e-169 606.0
15 TraesCS3A01G151400 chr1A 85.484 186 19 8 3901 4080 521228520 521228703 1.940000e-43 187.0
16 TraesCS3A01G151400 chr1B 80.720 778 140 10 1870 2642 212410383 212409611 7.550000e-167 597.0
17 TraesCS3A01G151400 chr1B 76.060 731 152 17 1915 2635 622367012 622366295 3.880000e-95 359.0
18 TraesCS3A01G151400 chr7D 81.141 403 40 15 3684 4080 601403487 601403115 1.430000e-74 291.0
19 TraesCS3A01G151400 chr7D 80.789 380 34 14 3684 4054 601432336 601431987 1.120000e-65 261.0
20 TraesCS3A01G151400 chr5D 86.923 260 28 6 3595 3852 434315938 434315683 1.860000e-73 287.0
21 TraesCS3A01G151400 chrUn 83.784 185 23 7 3901 4080 7548045 7547863 7.010000e-38 169.0
22 TraesCS3A01G151400 chr2B 81.646 158 25 4 3896 4052 692624834 692624680 1.190000e-25 128.0
23 TraesCS3A01G151400 chr7A 80.769 156 22 7 3901 4051 730831359 730831511 9.270000e-22 115.0
24 TraesCS3A01G151400 chr7A 100.000 32 0 0 3710 3741 730831224 730831255 4.400000e-05 60.2
25 TraesCS3A01G151400 chr7B 86.047 86 8 4 3971 4054 468417260 468417343 5.620000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G151400 chr3A 140804492 140808571 4079 True 7535.000000 7535 100.000000 1 4080 1 chr3A.!!$R1 4079
1 TraesCS3A01G151400 chr3D 129023240 129026989 3749 False 1167.475000 3627 91.821500 3 3504 4 chr3D.!!$F1 3501
2 TraesCS3A01G151400 chr3D 310683039 310684286 1247 False 352.500000 547 78.890500 1877 2972 2 chr3D.!!$F2 1095
3 TraesCS3A01G151400 chr3B 183081468 183085105 3637 False 1545.666667 3620 89.837333 1 3594 3 chr3B.!!$F1 3593
4 TraesCS3A01G151400 chr3B 410773828 410774942 1114 True 339.500000 521 78.488000 1900 2990 2 chr3B.!!$R1 1090
5 TraesCS3A01G151400 chr1D 137967559 137968331 772 True 619.000000 619 81.234000 1870 2642 1 chr1D.!!$R1 772
6 TraesCS3A01G151400 chr1A 154700612 154701386 774 False 606.000000 606 80.922000 1870 2644 1 chr1A.!!$F1 774
7 TraesCS3A01G151400 chr1B 212409611 212410383 772 True 597.000000 597 80.720000 1870 2642 1 chr1B.!!$R1 772
8 TraesCS3A01G151400 chr1B 622366295 622367012 717 True 359.000000 359 76.060000 1915 2635 1 chr1B.!!$R2 720

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
709 755 0.112218 TGCCCATGTACACTTGCCTT 59.888 50.0 0.00 0.0 0.0 4.35 F
1907 2014 0.250124 TGTTGCCGTCGGACAAGAAT 60.250 50.0 17.49 0.0 0.0 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2697 2809 0.532862 CCACTCAACAGCACTCGGTT 60.533 55.0 0.00 0.0 0.00 4.44 R
3300 3591 0.035739 ACCACCACGCGGAAATTACT 59.964 50.0 12.47 0.0 35.59 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
127 139 2.686915 GCCCCTGACAGAGAAAATGATG 59.313 50.000 3.32 0.00 0.00 3.07
173 185 4.324176 GGTTTTGGCATAATCCCCAACAAT 60.324 41.667 0.00 0.00 40.60 2.71
191 203 6.073112 CCAACAATCCAAACAAGCCTTAAATG 60.073 38.462 0.00 0.00 0.00 2.32
195 207 6.610075 ATCCAAACAAGCCTTAAATGTGAT 57.390 33.333 0.00 0.00 0.00 3.06
196 208 6.418057 TCCAAACAAGCCTTAAATGTGATT 57.582 33.333 0.00 0.00 0.00 2.57
246 258 0.380733 TCCACCGATGATTCTCGACG 59.619 55.000 6.97 0.00 41.12 5.12
250 262 0.380733 CCGATGATTCTCGACGGTGA 59.619 55.000 0.00 0.00 41.12 4.02
251 263 1.001268 CCGATGATTCTCGACGGTGAT 60.001 52.381 0.00 0.00 41.12 3.06
277 289 4.870426 TGCCGAGTTGAAGCTAATTTCTAG 59.130 41.667 0.00 0.00 0.00 2.43
279 291 5.220491 GCCGAGTTGAAGCTAATTTCTAGTG 60.220 44.000 0.00 0.00 0.00 2.74
280 292 5.220491 CCGAGTTGAAGCTAATTTCTAGTGC 60.220 44.000 0.00 0.00 0.00 4.40
281 293 5.578727 CGAGTTGAAGCTAATTTCTAGTGCT 59.421 40.000 0.00 0.00 35.30 4.40
282 294 6.454848 CGAGTTGAAGCTAATTTCTAGTGCTG 60.455 42.308 0.00 0.00 33.96 4.41
283 295 6.467677 AGTTGAAGCTAATTTCTAGTGCTGA 58.532 36.000 0.00 0.00 33.96 4.26
284 296 6.593382 AGTTGAAGCTAATTTCTAGTGCTGAG 59.407 38.462 0.00 0.00 33.96 3.35
324 336 8.713271 GTGAAACTGGTACTAGAAAATTCAGAG 58.287 37.037 13.86 0.00 0.00 3.35
355 367 2.713967 GCCCTGCGTGAATTGGCAT 61.714 57.895 0.00 0.00 41.76 4.40
356 368 1.383456 GCCCTGCGTGAATTGGCATA 61.383 55.000 0.00 0.00 41.76 3.14
395 410 5.359009 ACAAAAGATCATTGCCTACATCCTG 59.641 40.000 10.24 0.00 0.00 3.86
414 429 2.483877 CTGCTGAATCGCCACAAGTTTA 59.516 45.455 0.00 0.00 0.00 2.01
508 523 0.238289 CCCTGCTTTGCAACACGTAG 59.762 55.000 0.00 0.00 38.41 3.51
525 540 1.961394 GTAGTGTCAGTCTGTCACCCA 59.039 52.381 21.74 10.93 37.17 4.51
547 562 1.201429 CCAGGGTTACCAGCAGACCT 61.201 60.000 2.98 0.00 40.13 3.85
693 739 3.345808 TCGAGTTGCGCTGTTGCC 61.346 61.111 9.73 0.00 40.61 4.52
709 755 0.112218 TGCCCATGTACACTTGCCTT 59.888 50.000 0.00 0.00 0.00 4.35
710 756 1.352687 TGCCCATGTACACTTGCCTTA 59.647 47.619 0.00 0.00 0.00 2.69
711 757 2.025416 TGCCCATGTACACTTGCCTTAT 60.025 45.455 0.00 0.00 0.00 1.73
712 758 2.358898 GCCCATGTACACTTGCCTTATG 59.641 50.000 0.00 0.00 0.00 1.90
713 759 3.884895 CCCATGTACACTTGCCTTATGA 58.115 45.455 0.00 0.00 0.00 2.15
714 760 3.627577 CCCATGTACACTTGCCTTATGAC 59.372 47.826 0.00 0.00 0.00 3.06
715 761 4.517285 CCATGTACACTTGCCTTATGACT 58.483 43.478 0.00 0.00 0.00 3.41
716 762 4.943705 CCATGTACACTTGCCTTATGACTT 59.056 41.667 0.00 0.00 0.00 3.01
720 766 7.609760 TGTACACTTGCCTTATGACTTTATG 57.390 36.000 0.00 0.00 0.00 1.90
730 776 5.396772 CCTTATGACTTTATGAGCCAGTCCA 60.397 44.000 0.00 0.00 36.83 4.02
757 803 1.196808 ACACGCCGTGATCATTTTGTC 59.803 47.619 25.94 0.00 36.96 3.18
778 824 1.268899 CTGAAGCTGGCAGAAACTTGG 59.731 52.381 20.86 3.99 35.39 3.61
808 859 1.204704 CCTATGTGGTTCAGCGAGACA 59.795 52.381 0.00 0.00 0.00 3.41
867 918 2.421424 GCACCCAGCTGAAGAATAAGTG 59.579 50.000 17.39 9.94 41.15 3.16
868 919 3.869912 GCACCCAGCTGAAGAATAAGTGA 60.870 47.826 17.39 0.00 41.15 3.41
869 920 4.326826 CACCCAGCTGAAGAATAAGTGAA 58.673 43.478 17.39 0.00 0.00 3.18
870 921 4.946157 CACCCAGCTGAAGAATAAGTGAAT 59.054 41.667 17.39 0.00 0.00 2.57
885 936 4.373348 AGTGAATAACCGAGCTACTGAC 57.627 45.455 0.00 0.00 0.00 3.51
889 940 4.818005 TGAATAACCGAGCTACTGACGATA 59.182 41.667 0.00 0.00 0.00 2.92
895 946 4.691685 ACCGAGCTACTGACGATAGATAAG 59.308 45.833 0.00 0.00 41.38 1.73
896 947 4.930405 CCGAGCTACTGACGATAGATAAGA 59.070 45.833 0.00 0.00 41.38 2.10
900 951 8.111836 CGAGCTACTGACGATAGATAAGATAAC 58.888 40.741 0.00 0.00 41.38 1.89
903 954 7.899330 GCTACTGACGATAGATAAGATAACGTC 59.101 40.741 0.00 0.00 44.13 4.34
906 957 7.130303 TGACGATAGATAAGATAACGTCAGG 57.870 40.000 13.80 0.00 46.57 3.86
907 958 6.709397 TGACGATAGATAAGATAACGTCAGGT 59.291 38.462 13.80 0.00 46.57 4.00
921 993 2.855963 CGTCAGGTTAATAACGTGCGAT 59.144 45.455 23.92 0.00 44.55 4.58
932 1004 2.024868 CGTGCGATTCGGTGGTTCA 61.025 57.895 8.34 0.00 0.00 3.18
974 1049 6.470235 CGTTTTTCTGATTGATATGCTTCACC 59.530 38.462 0.00 0.00 0.00 4.02
976 1051 6.932356 TTTCTGATTGATATGCTTCACCTC 57.068 37.500 0.00 0.00 0.00 3.85
977 1052 5.883685 TCTGATTGATATGCTTCACCTCT 57.116 39.130 0.00 0.00 0.00 3.69
989 1064 3.683802 CTTCACCTCTCCTTGCAGATTT 58.316 45.455 0.00 0.00 0.00 2.17
991 1066 2.005451 CACCTCTCCTTGCAGATTTCG 58.995 52.381 0.00 0.00 0.00 3.46
1093 1182 1.360820 GAGCTTCAAGGTAAGTCGCC 58.639 55.000 0.00 0.00 0.00 5.54
1102 1191 2.171725 GTAAGTCGCCCGTGCCATC 61.172 63.158 0.00 0.00 0.00 3.51
1126 1215 1.402613 CATGCAATGCCGACTTGATCA 59.597 47.619 1.53 0.00 37.62 2.92
1127 1216 1.753930 TGCAATGCCGACTTGATCAT 58.246 45.000 1.53 0.00 0.00 2.45
1128 1217 2.093890 TGCAATGCCGACTTGATCATT 58.906 42.857 1.53 0.00 0.00 2.57
1129 1218 2.159352 TGCAATGCCGACTTGATCATTG 60.159 45.455 1.53 8.85 45.00 2.82
1130 1219 2.097954 GCAATGCCGACTTGATCATTGA 59.902 45.455 15.39 0.00 45.01 2.57
1169 1258 4.065281 GTGCCGGTGTAGGAGCGT 62.065 66.667 1.90 0.00 44.30 5.07
1171 1260 3.755628 GCCGGTGTAGGAGCGTCA 61.756 66.667 1.90 0.00 44.30 4.35
1172 1261 3.077519 GCCGGTGTAGGAGCGTCAT 62.078 63.158 1.90 0.00 44.30 3.06
1173 1262 1.226974 CCGGTGTAGGAGCGTCATG 60.227 63.158 0.00 0.00 44.30 3.07
1174 1263 1.226974 CGGTGTAGGAGCGTCATGG 60.227 63.158 0.00 0.00 40.79 3.66
1175 1264 1.521681 GGTGTAGGAGCGTCATGGC 60.522 63.158 0.00 0.00 0.00 4.40
1176 1265 1.878522 GTGTAGGAGCGTCATGGCG 60.879 63.158 16.99 16.99 38.18 5.69
1791 1889 0.669625 GGTACACCACGAGCAACTCC 60.670 60.000 0.00 0.00 35.64 3.85
1890 1997 3.374402 CGTCGGAGGAGCTGGTGT 61.374 66.667 0.00 0.00 0.00 4.16
1907 2014 0.250124 TGTTGCCGTCGGACAAGAAT 60.250 50.000 17.49 0.00 0.00 2.40
2057 2164 2.356313 CTCGTGCTCTGGTGCGTT 60.356 61.111 0.00 0.00 35.36 4.84
2272 2382 3.576356 CATGGCGCCCATCGTGTC 61.576 66.667 26.77 0.00 43.15 3.67
2660 2770 4.386245 GTGAGCACCTCGATCGAC 57.614 61.111 15.15 4.35 32.35 4.20
2689 2801 0.938637 GCATGGCGAGTCTCGATCAG 60.939 60.000 26.11 12.66 43.74 2.90
2690 2802 0.383590 CATGGCGAGTCTCGATCAGT 59.616 55.000 26.11 9.78 43.74 3.41
2691 2803 0.383590 ATGGCGAGTCTCGATCAGTG 59.616 55.000 26.11 0.00 43.74 3.66
2692 2804 0.960861 TGGCGAGTCTCGATCAGTGT 60.961 55.000 26.11 0.00 43.74 3.55
2697 2809 2.872858 CGAGTCTCGATCAGTGTGGATA 59.127 50.000 17.52 0.00 43.74 2.59
2698 2810 3.312697 CGAGTCTCGATCAGTGTGGATAA 59.687 47.826 17.52 0.00 43.74 1.75
2700 2812 3.381908 AGTCTCGATCAGTGTGGATAACC 59.618 47.826 0.00 0.00 0.00 2.85
2701 2813 2.357952 TCTCGATCAGTGTGGATAACCG 59.642 50.000 0.00 0.00 39.42 4.44
2702 2814 2.357952 CTCGATCAGTGTGGATAACCGA 59.642 50.000 0.00 0.00 39.42 4.69
2705 2817 3.448686 GATCAGTGTGGATAACCGAGTG 58.551 50.000 0.00 0.00 39.42 3.51
2712 2843 1.621317 TGGATAACCGAGTGCTGTTGA 59.379 47.619 0.00 0.00 39.42 3.18
2716 2847 0.532862 AACCGAGTGCTGTTGAGTGG 60.533 55.000 0.00 0.00 0.00 4.00
3044 3312 3.096633 AACAAGGACGCCGACACCA 62.097 57.895 0.00 0.00 0.00 4.17
3048 3316 2.358247 GGACGCCGACACCACATT 60.358 61.111 0.00 0.00 0.00 2.71
3116 3402 1.204941 ACTAGCGACGCCTTCTTCATT 59.795 47.619 17.79 0.00 0.00 2.57
3117 3403 1.590238 CTAGCGACGCCTTCTTCATTG 59.410 52.381 17.79 0.00 0.00 2.82
3118 3404 1.226128 GCGACGCCTTCTTCATTGC 60.226 57.895 9.14 0.00 0.00 3.56
3119 3405 1.911293 GCGACGCCTTCTTCATTGCA 61.911 55.000 9.14 0.00 0.00 4.08
3120 3406 0.729116 CGACGCCTTCTTCATTGCAT 59.271 50.000 0.00 0.00 0.00 3.96
3121 3407 1.530441 CGACGCCTTCTTCATTGCATG 60.530 52.381 0.00 0.00 0.00 4.06
3122 3408 1.470098 GACGCCTTCTTCATTGCATGT 59.530 47.619 0.00 0.00 0.00 3.21
3123 3409 1.200716 ACGCCTTCTTCATTGCATGTG 59.799 47.619 0.00 0.00 0.00 3.21
3124 3410 1.468565 CGCCTTCTTCATTGCATGTGG 60.469 52.381 0.00 0.00 0.00 4.17
3125 3411 1.738030 GCCTTCTTCATTGCATGTGGC 60.738 52.381 0.00 0.00 45.13 5.01
3134 3420 3.430862 GCATGTGGCGAGGCGAAA 61.431 61.111 0.00 0.00 0.00 3.46
3147 3437 1.435515 GCGAAACAAACTGGTGGCA 59.564 52.632 0.00 0.00 0.00 4.92
3215 3506 4.025145 GGACGTGTGTTCGAGAATTTTCTT 60.025 41.667 0.00 0.00 37.73 2.52
3287 3578 0.606096 TCAACACGGTGATCGATGGT 59.394 50.000 16.29 0.00 42.43 3.55
3289 3580 2.159296 TCAACACGGTGATCGATGGTAG 60.159 50.000 16.29 0.00 42.43 3.18
3291 3582 2.646930 ACACGGTGATCGATGGTAGTA 58.353 47.619 16.29 0.00 42.43 1.82
3293 3584 4.392047 ACACGGTGATCGATGGTAGTATA 58.608 43.478 16.29 0.00 42.43 1.47
3294 3585 5.008331 ACACGGTGATCGATGGTAGTATAT 58.992 41.667 16.29 0.00 42.43 0.86
3295 3586 5.106277 ACACGGTGATCGATGGTAGTATATG 60.106 44.000 16.29 0.00 42.43 1.78
3296 3587 4.142447 ACGGTGATCGATGGTAGTATATGC 60.142 45.833 0.54 0.00 42.43 3.14
3298 3589 5.344066 GGTGATCGATGGTAGTATATGCTG 58.656 45.833 0.54 0.00 0.00 4.41
3300 3591 6.095021 GGTGATCGATGGTAGTATATGCTGTA 59.905 42.308 0.54 0.00 0.00 2.74
3305 3598 8.803397 TCGATGGTAGTATATGCTGTAGTAAT 57.197 34.615 3.24 0.00 0.00 1.89
3327 3620 2.424302 GCGTGGTGGTGTGTAGGT 59.576 61.111 0.00 0.00 0.00 3.08
3364 3887 6.463049 GGAGAGATGCTGTTACTTATGGCTTA 60.463 42.308 0.00 0.00 0.00 3.09
3365 3888 6.889198 AGAGATGCTGTTACTTATGGCTTAA 58.111 36.000 0.00 0.00 0.00 1.85
3366 3889 6.763610 AGAGATGCTGTTACTTATGGCTTAAC 59.236 38.462 0.00 0.00 0.00 2.01
3367 3890 5.823045 AGATGCTGTTACTTATGGCTTAACC 59.177 40.000 0.00 0.00 39.84 2.85
3368 3891 3.936453 TGCTGTTACTTATGGCTTAACCG 59.064 43.478 0.00 0.00 43.94 4.44
3369 3892 3.937079 GCTGTTACTTATGGCTTAACCGT 59.063 43.478 0.00 0.00 43.94 4.83
3370 3893 4.201783 GCTGTTACTTATGGCTTAACCGTG 60.202 45.833 0.00 0.00 43.94 4.94
3371 3894 5.149973 TGTTACTTATGGCTTAACCGTGA 57.850 39.130 0.00 0.00 43.94 4.35
3372 3895 5.736813 TGTTACTTATGGCTTAACCGTGAT 58.263 37.500 0.00 0.00 43.94 3.06
3373 3896 6.876155 TGTTACTTATGGCTTAACCGTGATA 58.124 36.000 0.00 0.00 43.94 2.15
3374 3897 6.757947 TGTTACTTATGGCTTAACCGTGATAC 59.242 38.462 0.00 0.00 43.94 2.24
3377 3900 3.906720 ATGGCTTAACCGTGATACAGT 57.093 42.857 0.00 0.00 43.94 3.55
3409 3968 4.694339 GGCTGTACAATAAATCCGTCTCT 58.306 43.478 0.00 0.00 0.00 3.10
3414 3973 7.115095 GCTGTACAATAAATCCGTCTCTGTATC 59.885 40.741 0.00 0.00 0.00 2.24
3415 3974 8.234136 TGTACAATAAATCCGTCTCTGTATCT 57.766 34.615 0.00 0.00 0.00 1.98
3416 3975 8.135529 TGTACAATAAATCCGTCTCTGTATCTG 58.864 37.037 0.00 0.00 0.00 2.90
3418 3977 8.234136 ACAATAAATCCGTCTCTGTATCTGTA 57.766 34.615 0.00 0.00 0.00 2.74
3432 3991 8.762481 TCTGTATCTGTATGTGGTACATTACT 57.238 34.615 0.00 0.00 44.52 2.24
3435 3994 8.410912 TGTATCTGTATGTGGTACATTACTGAC 58.589 37.037 0.00 0.00 44.52 3.51
3441 4000 2.527497 TGGTACATTACTGACCACCGA 58.473 47.619 0.00 0.00 38.34 4.69
3459 4018 2.202892 GGAAGATCGTGACCGGGC 60.203 66.667 6.32 1.57 33.95 6.13
3516 4092 1.091771 GCATGTCAGTATGCCACGCT 61.092 55.000 0.00 0.00 45.93 5.07
3518 4094 0.826715 ATGTCAGTATGCCACGCTCT 59.173 50.000 0.00 0.00 34.76 4.09
3522 4100 2.094417 GTCAGTATGCCACGCTCTTTTC 59.906 50.000 0.00 0.00 34.76 2.29
3526 4104 3.431725 GCCACGCTCTTTTCCCCG 61.432 66.667 0.00 0.00 0.00 5.73
3530 4108 0.320073 CACGCTCTTTTCCCCGTACA 60.320 55.000 0.00 0.00 32.05 2.90
3533 4111 1.607251 CGCTCTTTTCCCCGTACAAGT 60.607 52.381 0.00 0.00 0.00 3.16
3546 4124 7.371936 TCCCCGTACAAGTTATTGAAAATTTG 58.628 34.615 0.00 0.00 38.83 2.32
3602 4180 9.463443 AAACAACAGATAAAACATCACTTTAGC 57.537 29.630 0.00 0.00 0.00 3.09
3603 4181 8.396272 ACAACAGATAAAACATCACTTTAGCT 57.604 30.769 0.00 0.00 35.84 3.32
3604 4182 9.502091 ACAACAGATAAAACATCACTTTAGCTA 57.498 29.630 0.00 0.00 33.80 3.32
3605 4183 9.760660 CAACAGATAAAACATCACTTTAGCTAC 57.239 33.333 0.00 0.00 33.80 3.58
3606 4184 9.502091 AACAGATAAAACATCACTTTAGCTACA 57.498 29.630 0.00 0.00 33.80 2.74
3607 4185 8.936864 ACAGATAAAACATCACTTTAGCTACAC 58.063 33.333 0.00 0.00 33.80 2.90
3608 4186 9.155975 CAGATAAAACATCACTTTAGCTACACT 57.844 33.333 0.00 0.00 33.80 3.55
3609 4187 9.155975 AGATAAAACATCACTTTAGCTACACTG 57.844 33.333 0.00 0.00 34.19 3.66
3610 4188 9.151471 GATAAAACATCACTTTAGCTACACTGA 57.849 33.333 0.00 0.00 0.00 3.41
3611 4189 7.801716 AAAACATCACTTTAGCTACACTGAA 57.198 32.000 0.00 0.00 0.00 3.02
3612 4190 7.426929 AAACATCACTTTAGCTACACTGAAG 57.573 36.000 0.00 0.00 45.26 3.02
3613 4191 6.346477 ACATCACTTTAGCTACACTGAAGA 57.654 37.500 8.73 0.00 43.07 2.87
3614 4192 6.159988 ACATCACTTTAGCTACACTGAAGAC 58.840 40.000 8.73 0.00 43.07 3.01
3615 4193 4.795268 TCACTTTAGCTACACTGAAGACG 58.205 43.478 8.73 1.24 43.07 4.18
3616 4194 3.365220 CACTTTAGCTACACTGAAGACGC 59.635 47.826 8.73 0.00 43.07 5.19
3617 4195 2.649331 TTAGCTACACTGAAGACGCC 57.351 50.000 0.00 0.00 0.00 5.68
3618 4196 1.835494 TAGCTACACTGAAGACGCCT 58.165 50.000 0.00 0.00 0.00 5.52
3619 4197 0.244994 AGCTACACTGAAGACGCCTG 59.755 55.000 0.00 0.00 0.00 4.85
3620 4198 0.737715 GCTACACTGAAGACGCCTGG 60.738 60.000 0.00 0.00 0.00 4.45
3621 4199 0.888619 CTACACTGAAGACGCCTGGA 59.111 55.000 0.00 0.00 0.00 3.86
3622 4200 1.272490 CTACACTGAAGACGCCTGGAA 59.728 52.381 0.00 0.00 0.00 3.53
3623 4201 0.468226 ACACTGAAGACGCCTGGAAA 59.532 50.000 0.00 0.00 0.00 3.13
3624 4202 1.072331 ACACTGAAGACGCCTGGAAAT 59.928 47.619 0.00 0.00 0.00 2.17
3625 4203 2.154462 CACTGAAGACGCCTGGAAATT 58.846 47.619 0.00 0.00 0.00 1.82
3626 4204 3.244422 ACACTGAAGACGCCTGGAAATTA 60.244 43.478 0.00 0.00 0.00 1.40
3627 4205 3.751175 CACTGAAGACGCCTGGAAATTAA 59.249 43.478 0.00 0.00 0.00 1.40
3628 4206 4.396166 CACTGAAGACGCCTGGAAATTAAT 59.604 41.667 0.00 0.00 0.00 1.40
3629 4207 5.010282 ACTGAAGACGCCTGGAAATTAATT 58.990 37.500 0.00 0.00 0.00 1.40
3630 4208 5.476945 ACTGAAGACGCCTGGAAATTAATTT 59.523 36.000 13.24 13.24 0.00 1.82
3631 4209 5.949735 TGAAGACGCCTGGAAATTAATTTC 58.050 37.500 26.19 26.19 44.08 2.17
3632 4210 4.616181 AGACGCCTGGAAATTAATTTCG 57.384 40.909 26.71 20.29 45.37 3.46
3633 4211 3.377172 AGACGCCTGGAAATTAATTTCGG 59.623 43.478 26.71 23.95 45.37 4.30
3634 4212 2.425668 ACGCCTGGAAATTAATTTCGGG 59.574 45.455 28.47 28.47 45.37 5.14
3635 4213 2.425668 CGCCTGGAAATTAATTTCGGGT 59.574 45.455 30.40 9.99 45.37 5.28
3636 4214 3.488553 CGCCTGGAAATTAATTTCGGGTC 60.489 47.826 30.40 25.05 45.37 4.46
3637 4215 3.445805 GCCTGGAAATTAATTTCGGGTCA 59.554 43.478 30.40 22.92 45.37 4.02
3638 4216 4.440112 GCCTGGAAATTAATTTCGGGTCAG 60.440 45.833 30.40 27.32 45.37 3.51
3639 4217 4.705023 CCTGGAAATTAATTTCGGGTCAGT 59.295 41.667 26.71 0.00 45.37 3.41
3640 4218 5.163652 CCTGGAAATTAATTTCGGGTCAGTC 60.164 44.000 26.71 15.09 45.37 3.51
3641 4219 4.393680 TGGAAATTAATTTCGGGTCAGTCG 59.606 41.667 26.71 0.00 45.37 4.18
3642 4220 4.632688 GGAAATTAATTTCGGGTCAGTCGA 59.367 41.667 26.71 0.00 45.37 4.20
3643 4221 5.296035 GGAAATTAATTTCGGGTCAGTCGAT 59.704 40.000 26.71 0.00 45.37 3.59
3644 4222 6.183360 GGAAATTAATTTCGGGTCAGTCGATT 60.183 38.462 26.71 0.00 45.37 3.34
3645 4223 6.753107 AATTAATTTCGGGTCAGTCGATTT 57.247 33.333 0.00 0.00 36.49 2.17
3646 4224 6.753107 ATTAATTTCGGGTCAGTCGATTTT 57.247 33.333 0.00 0.00 36.49 1.82
3647 4225 6.563222 TTAATTTCGGGTCAGTCGATTTTT 57.437 33.333 0.00 0.00 36.49 1.94
3670 4248 7.521871 TTTTTGGCCATTGATTATTTGCTTT 57.478 28.000 6.09 0.00 0.00 3.51
3671 4249 6.497785 TTTGGCCATTGATTATTTGCTTTG 57.502 33.333 6.09 0.00 0.00 2.77
3672 4250 5.417754 TGGCCATTGATTATTTGCTTTGA 57.582 34.783 0.00 0.00 0.00 2.69
3673 4251 5.421277 TGGCCATTGATTATTTGCTTTGAG 58.579 37.500 0.00 0.00 0.00 3.02
3674 4252 5.187381 TGGCCATTGATTATTTGCTTTGAGA 59.813 36.000 0.00 0.00 0.00 3.27
3675 4253 6.126997 TGGCCATTGATTATTTGCTTTGAGAT 60.127 34.615 0.00 0.00 0.00 2.75
3676 4254 6.764560 GGCCATTGATTATTTGCTTTGAGATT 59.235 34.615 0.00 0.00 0.00 2.40
3677 4255 7.042254 GGCCATTGATTATTTGCTTTGAGATTC 60.042 37.037 0.00 0.00 0.00 2.52
3678 4256 7.493320 GCCATTGATTATTTGCTTTGAGATTCA 59.507 33.333 0.00 0.00 0.00 2.57
3679 4257 9.542462 CCATTGATTATTTGCTTTGAGATTCAT 57.458 29.630 0.00 0.00 0.00 2.57
3695 4273 9.702494 TTGAGATTCATATTGTACTATGAGCTG 57.298 33.333 0.00 0.00 38.86 4.24
3696 4274 8.309656 TGAGATTCATATTGTACTATGAGCTGG 58.690 37.037 0.00 0.00 38.86 4.85
3697 4275 7.102346 AGATTCATATTGTACTATGAGCTGGC 58.898 38.462 0.00 0.00 38.86 4.85
3698 4276 6.425210 TTCATATTGTACTATGAGCTGGCT 57.575 37.500 0.00 0.00 38.86 4.75
3699 4277 6.425210 TCATATTGTACTATGAGCTGGCTT 57.575 37.500 0.00 0.00 34.08 4.35
3700 4278 7.539034 TCATATTGTACTATGAGCTGGCTTA 57.461 36.000 0.00 0.00 34.08 3.09
3701 4279 7.606349 TCATATTGTACTATGAGCTGGCTTAG 58.394 38.462 0.00 0.00 34.08 2.18
3702 4280 7.451566 TCATATTGTACTATGAGCTGGCTTAGA 59.548 37.037 0.00 0.00 34.08 2.10
3703 4281 6.678568 ATTGTACTATGAGCTGGCTTAGAT 57.321 37.500 0.00 0.08 0.00 1.98
3704 4282 6.485830 TTGTACTATGAGCTGGCTTAGATT 57.514 37.500 0.00 0.00 0.00 2.40
3705 4283 6.485830 TGTACTATGAGCTGGCTTAGATTT 57.514 37.500 0.00 0.00 0.00 2.17
3706 4284 6.889198 TGTACTATGAGCTGGCTTAGATTTT 58.111 36.000 0.00 0.00 0.00 1.82
3707 4285 6.763135 TGTACTATGAGCTGGCTTAGATTTTG 59.237 38.462 0.00 0.00 0.00 2.44
3708 4286 5.749462 ACTATGAGCTGGCTTAGATTTTGT 58.251 37.500 0.00 0.00 0.00 2.83
3709 4287 6.183347 ACTATGAGCTGGCTTAGATTTTGTT 58.817 36.000 0.00 0.00 0.00 2.83
3710 4288 5.990120 ATGAGCTGGCTTAGATTTTGTTT 57.010 34.783 0.00 0.00 0.00 2.83
3711 4289 5.789643 TGAGCTGGCTTAGATTTTGTTTT 57.210 34.783 0.00 0.00 0.00 2.43
3712 4290 6.160576 TGAGCTGGCTTAGATTTTGTTTTT 57.839 33.333 0.00 0.00 0.00 1.94
3733 4311 6.463995 TTTTGACTGACCATATATTTGGGC 57.536 37.500 15.61 13.42 45.85 5.36
3734 4312 4.098914 TGACTGACCATATATTTGGGCC 57.901 45.455 14.79 0.00 44.96 5.80
3735 4313 3.461458 TGACTGACCATATATTTGGGCCA 59.539 43.478 14.79 0.00 44.96 5.36
3736 4314 4.074970 GACTGACCATATATTTGGGCCAG 58.925 47.826 22.81 22.81 44.96 4.85
3737 4315 3.463329 ACTGACCATATATTTGGGCCAGT 59.537 43.478 23.66 23.66 44.96 4.00
3738 4316 4.074970 CTGACCATATATTTGGGCCAGTC 58.925 47.826 14.79 8.84 44.96 3.51
3739 4317 3.461458 TGACCATATATTTGGGCCAGTCA 59.539 43.478 14.79 14.71 44.96 3.41
3740 4318 4.079500 TGACCATATATTTGGGCCAGTCAA 60.080 41.667 14.79 5.15 44.96 3.18
3741 4319 4.215109 ACCATATATTTGGGCCAGTCAAC 58.785 43.478 15.61 0.00 41.35 3.18
3742 4320 4.079212 ACCATATATTTGGGCCAGTCAACT 60.079 41.667 15.61 0.00 41.35 3.16
3743 4321 4.895297 CCATATATTTGGGCCAGTCAACTT 59.105 41.667 6.23 0.00 32.80 2.66
3744 4322 5.221303 CCATATATTTGGGCCAGTCAACTTG 60.221 44.000 6.23 0.90 32.80 3.16
3745 4323 0.681175 ATTTGGGCCAGTCAACTTGC 59.319 50.000 6.23 0.00 34.24 4.01
3746 4324 0.396974 TTTGGGCCAGTCAACTTGCT 60.397 50.000 6.23 0.00 35.25 3.91
3749 4327 0.036875 GGGCCAGTCAACTTGCTACT 59.963 55.000 4.39 0.00 35.25 2.57
3753 4331 1.071605 CAGTCAACTTGCTACTCGGC 58.928 55.000 0.00 0.00 0.00 5.54
3754 4332 0.037232 AGTCAACTTGCTACTCGGCC 60.037 55.000 0.00 0.00 0.00 6.13
3769 4347 3.573491 GCCGAAGCCCACGTATGC 61.573 66.667 0.43 0.43 0.00 3.14
3770 4348 2.895372 CCGAAGCCCACGTATGCC 60.895 66.667 4.98 0.00 0.00 4.40
3771 4349 3.261951 CGAAGCCCACGTATGCCG 61.262 66.667 4.98 0.00 44.03 5.69
3772 4350 3.573491 GAAGCCCACGTATGCCGC 61.573 66.667 4.98 0.00 41.42 6.53
3795 4373 3.721706 CCTCGCCTCTGCCCCTTT 61.722 66.667 0.00 0.00 0.00 3.11
3796 4374 2.437359 CTCGCCTCTGCCCCTTTG 60.437 66.667 0.00 0.00 0.00 2.77
3797 4375 3.249189 TCGCCTCTGCCCCTTTGT 61.249 61.111 0.00 0.00 0.00 2.83
3798 4376 2.282462 CGCCTCTGCCCCTTTGTT 60.282 61.111 0.00 0.00 0.00 2.83
3799 4377 1.903404 CGCCTCTGCCCCTTTGTTT 60.903 57.895 0.00 0.00 0.00 2.83
3800 4378 1.463553 CGCCTCTGCCCCTTTGTTTT 61.464 55.000 0.00 0.00 0.00 2.43
3801 4379 0.758734 GCCTCTGCCCCTTTGTTTTT 59.241 50.000 0.00 0.00 0.00 1.94
3802 4380 1.270305 GCCTCTGCCCCTTTGTTTTTC 60.270 52.381 0.00 0.00 0.00 2.29
3803 4381 2.319844 CCTCTGCCCCTTTGTTTTTCT 58.680 47.619 0.00 0.00 0.00 2.52
3804 4382 2.700371 CCTCTGCCCCTTTGTTTTTCTT 59.300 45.455 0.00 0.00 0.00 2.52
3805 4383 3.134623 CCTCTGCCCCTTTGTTTTTCTTT 59.865 43.478 0.00 0.00 0.00 2.52
3806 4384 4.343814 CCTCTGCCCCTTTGTTTTTCTTTA 59.656 41.667 0.00 0.00 0.00 1.85
3807 4385 5.163353 CCTCTGCCCCTTTGTTTTTCTTTAA 60.163 40.000 0.00 0.00 0.00 1.52
3808 4386 6.301169 TCTGCCCCTTTGTTTTTCTTTAAA 57.699 33.333 0.00 0.00 0.00 1.52
3809 4387 6.712276 TCTGCCCCTTTGTTTTTCTTTAAAA 58.288 32.000 0.00 0.00 33.41 1.52
3810 4388 6.821160 TCTGCCCCTTTGTTTTTCTTTAAAAG 59.179 34.615 0.00 0.00 36.44 2.27
3811 4389 6.712276 TGCCCCTTTGTTTTTCTTTAAAAGA 58.288 32.000 0.00 0.00 36.44 2.52
3812 4390 7.168905 TGCCCCTTTGTTTTTCTTTAAAAGAA 58.831 30.769 0.00 0.00 45.30 2.52
3827 4405 9.912634 TCTTTAAAAGAAATCTGCCTTTATGTG 57.087 29.630 0.00 0.00 33.83 3.21
3828 4406 9.696917 CTTTAAAAGAAATCTGCCTTTATGTGT 57.303 29.630 0.00 0.00 32.81 3.72
3831 4409 8.593492 AAAAGAAATCTGCCTTTATGTGTTTC 57.407 30.769 0.00 0.00 32.81 2.78
3832 4410 7.530426 AAGAAATCTGCCTTTATGTGTTTCT 57.470 32.000 0.00 0.00 36.54 2.52
3833 4411 7.530426 AGAAATCTGCCTTTATGTGTTTCTT 57.470 32.000 0.00 0.00 32.51 2.52
3834 4412 7.597386 AGAAATCTGCCTTTATGTGTTTCTTC 58.403 34.615 0.00 0.00 32.51 2.87
3835 4413 7.449704 AGAAATCTGCCTTTATGTGTTTCTTCT 59.550 33.333 0.00 0.00 32.51 2.85
3836 4414 7.530426 AATCTGCCTTTATGTGTTTCTTCTT 57.470 32.000 0.00 0.00 0.00 2.52
3837 4415 6.959639 TCTGCCTTTATGTGTTTCTTCTTT 57.040 33.333 0.00 0.00 0.00 2.52
3838 4416 7.346751 TCTGCCTTTATGTGTTTCTTCTTTT 57.653 32.000 0.00 0.00 0.00 2.27
3839 4417 7.202526 TCTGCCTTTATGTGTTTCTTCTTTTG 58.797 34.615 0.00 0.00 0.00 2.44
3840 4418 6.872920 TGCCTTTATGTGTTTCTTCTTTTGT 58.127 32.000 0.00 0.00 0.00 2.83
3841 4419 7.327214 TGCCTTTATGTGTTTCTTCTTTTGTT 58.673 30.769 0.00 0.00 0.00 2.83
3842 4420 7.821846 TGCCTTTATGTGTTTCTTCTTTTGTTT 59.178 29.630 0.00 0.00 0.00 2.83
3843 4421 8.664798 GCCTTTATGTGTTTCTTCTTTTGTTTT 58.335 29.630 0.00 0.00 0.00 2.43
3866 4444 8.877808 TTTTTGTTTTTGCTGGAAAATTGTTT 57.122 23.077 7.90 0.00 33.46 2.83
3867 4445 7.864307 TTTGTTTTTGCTGGAAAATTGTTTG 57.136 28.000 7.90 0.00 33.46 2.93
3868 4446 6.566197 TGTTTTTGCTGGAAAATTGTTTGT 57.434 29.167 7.90 0.00 33.46 2.83
3869 4447 6.974965 TGTTTTTGCTGGAAAATTGTTTGTT 58.025 28.000 7.90 0.00 33.46 2.83
3870 4448 7.428826 TGTTTTTGCTGGAAAATTGTTTGTTT 58.571 26.923 7.90 0.00 33.46 2.83
3871 4449 7.922811 TGTTTTTGCTGGAAAATTGTTTGTTTT 59.077 25.926 7.90 0.00 33.46 2.43
3872 4450 8.759641 GTTTTTGCTGGAAAATTGTTTGTTTTT 58.240 25.926 7.90 0.00 33.46 1.94
3905 4483 9.745018 TTCTTCATCAGTTGGATTTTATTCTCT 57.255 29.630 0.00 0.00 32.57 3.10
3906 4484 9.745018 TCTTCATCAGTTGGATTTTATTCTCTT 57.255 29.630 0.00 0.00 32.57 2.85
3908 4486 9.745018 TTCATCAGTTGGATTTTATTCTCTTCT 57.255 29.630 0.00 0.00 32.57 2.85
3909 4487 9.745018 TCATCAGTTGGATTTTATTCTCTTCTT 57.255 29.630 0.00 0.00 32.57 2.52
3911 4489 9.972106 ATCAGTTGGATTTTATTCTCTTCTTCT 57.028 29.630 0.00 0.00 29.81 2.85
3912 4490 9.224267 TCAGTTGGATTTTATTCTCTTCTTCTG 57.776 33.333 0.00 0.00 0.00 3.02
3913 4491 9.007901 CAGTTGGATTTTATTCTCTTCTTCTGT 57.992 33.333 0.00 0.00 0.00 3.41
3926 4504 9.672673 TTCTCTTCTTCTGTAGATATTTTTGGG 57.327 33.333 0.00 0.00 31.54 4.12
3927 4505 8.826765 TCTCTTCTTCTGTAGATATTTTTGGGT 58.173 33.333 0.00 0.00 31.54 4.51
3928 4506 8.792830 TCTTCTTCTGTAGATATTTTTGGGTG 57.207 34.615 0.00 0.00 31.54 4.61
3929 4507 8.383175 TCTTCTTCTGTAGATATTTTTGGGTGT 58.617 33.333 0.00 0.00 31.54 4.16
3930 4508 8.934023 TTCTTCTGTAGATATTTTTGGGTGTT 57.066 30.769 0.00 0.00 31.54 3.32
3931 4509 8.335532 TCTTCTGTAGATATTTTTGGGTGTTG 57.664 34.615 0.00 0.00 0.00 3.33
3932 4510 7.393234 TCTTCTGTAGATATTTTTGGGTGTTGG 59.607 37.037 0.00 0.00 0.00 3.77
3933 4511 5.949354 TCTGTAGATATTTTTGGGTGTTGGG 59.051 40.000 0.00 0.00 0.00 4.12
3934 4512 5.646215 TGTAGATATTTTTGGGTGTTGGGT 58.354 37.500 0.00 0.00 0.00 4.51
3935 4513 5.478679 TGTAGATATTTTTGGGTGTTGGGTG 59.521 40.000 0.00 0.00 0.00 4.61
3936 4514 4.746466 AGATATTTTTGGGTGTTGGGTGA 58.254 39.130 0.00 0.00 0.00 4.02
3937 4515 4.772100 AGATATTTTTGGGTGTTGGGTGAG 59.228 41.667 0.00 0.00 0.00 3.51
3938 4516 2.239681 TTTTTGGGTGTTGGGTGAGT 57.760 45.000 0.00 0.00 0.00 3.41
3939 4517 1.479709 TTTTGGGTGTTGGGTGAGTG 58.520 50.000 0.00 0.00 0.00 3.51
3940 4518 0.333312 TTTGGGTGTTGGGTGAGTGT 59.667 50.000 0.00 0.00 0.00 3.55
3941 4519 1.214217 TTGGGTGTTGGGTGAGTGTA 58.786 50.000 0.00 0.00 0.00 2.90
3942 4520 1.214217 TGGGTGTTGGGTGAGTGTAA 58.786 50.000 0.00 0.00 0.00 2.41
3943 4521 1.564818 TGGGTGTTGGGTGAGTGTAAA 59.435 47.619 0.00 0.00 0.00 2.01
3944 4522 2.175931 TGGGTGTTGGGTGAGTGTAAAT 59.824 45.455 0.00 0.00 0.00 1.40
3945 4523 2.556622 GGGTGTTGGGTGAGTGTAAATG 59.443 50.000 0.00 0.00 0.00 2.32
3946 4524 3.482436 GGTGTTGGGTGAGTGTAAATGA 58.518 45.455 0.00 0.00 0.00 2.57
3947 4525 3.886505 GGTGTTGGGTGAGTGTAAATGAA 59.113 43.478 0.00 0.00 0.00 2.57
3948 4526 4.522789 GGTGTTGGGTGAGTGTAAATGAAT 59.477 41.667 0.00 0.00 0.00 2.57
3949 4527 5.708230 GGTGTTGGGTGAGTGTAAATGAATA 59.292 40.000 0.00 0.00 0.00 1.75
3950 4528 6.349033 GGTGTTGGGTGAGTGTAAATGAATAC 60.349 42.308 0.00 0.00 0.00 1.89
3951 4529 6.205853 GTGTTGGGTGAGTGTAAATGAATACA 59.794 38.462 0.00 0.00 33.52 2.29
3952 4530 6.945435 TGTTGGGTGAGTGTAAATGAATACAT 59.055 34.615 0.00 0.00 38.03 2.29
3953 4531 8.103935 TGTTGGGTGAGTGTAAATGAATACATA 58.896 33.333 0.00 0.00 38.03 2.29
3954 4532 8.395633 GTTGGGTGAGTGTAAATGAATACATAC 58.604 37.037 0.00 0.00 38.03 2.39
3955 4533 7.625469 TGGGTGAGTGTAAATGAATACATACA 58.375 34.615 0.00 0.00 38.03 2.29
3956 4534 8.271458 TGGGTGAGTGTAAATGAATACATACAT 58.729 33.333 0.00 0.00 38.03 2.29
3957 4535 9.772973 GGGTGAGTGTAAATGAATACATACATA 57.227 33.333 0.00 0.00 38.03 2.29
3988 4566 6.908825 ACAATATGTGCGAAAATTACACTGT 58.091 32.000 0.00 0.00 35.33 3.55
3989 4567 6.801377 ACAATATGTGCGAAAATTACACTGTG 59.199 34.615 6.19 6.19 35.33 3.66
3990 4568 6.735678 ATATGTGCGAAAATTACACTGTGA 57.264 33.333 15.86 0.00 35.33 3.58
3991 4569 5.627499 ATGTGCGAAAATTACACTGTGAT 57.373 34.783 15.86 1.48 35.33 3.06
3992 4570 6.735678 ATGTGCGAAAATTACACTGTGATA 57.264 33.333 15.86 1.86 35.33 2.15
3993 4571 6.735678 TGTGCGAAAATTACACTGTGATAT 57.264 33.333 15.86 4.29 35.33 1.63
3994 4572 6.541969 TGTGCGAAAATTACACTGTGATATG 58.458 36.000 15.86 0.00 35.33 1.78
3995 4573 6.370166 TGTGCGAAAATTACACTGTGATATGA 59.630 34.615 15.86 0.00 35.33 2.15
3996 4574 6.682863 GTGCGAAAATTACACTGTGATATGAC 59.317 38.462 15.86 0.00 0.00 3.06
3997 4575 6.593770 TGCGAAAATTACACTGTGATATGACT 59.406 34.615 15.86 0.00 0.00 3.41
3998 4576 6.901887 GCGAAAATTACACTGTGATATGACTG 59.098 38.462 15.86 0.00 0.00 3.51
3999 4577 7.413000 GCGAAAATTACACTGTGATATGACTGT 60.413 37.037 15.86 0.00 0.00 3.55
4000 4578 8.443160 CGAAAATTACACTGTGATATGACTGTT 58.557 33.333 15.86 0.00 0.00 3.16
4001 4579 9.546909 GAAAATTACACTGTGATATGACTGTTG 57.453 33.333 15.86 2.29 0.00 3.33
4002 4580 8.621532 AAATTACACTGTGATATGACTGTTGT 57.378 30.769 15.86 7.19 0.00 3.32
4003 4581 8.621532 AATTACACTGTGATATGACTGTTGTT 57.378 30.769 15.86 0.00 0.00 2.83
4004 4582 8.621532 ATTACACTGTGATATGACTGTTGTTT 57.378 30.769 15.86 0.00 0.00 2.83
4005 4583 6.304356 ACACTGTGATATGACTGTTGTTTG 57.696 37.500 15.86 0.00 0.00 2.93
4006 4584 5.822519 ACACTGTGATATGACTGTTGTTTGT 59.177 36.000 15.86 0.00 0.00 2.83
4007 4585 6.989759 ACACTGTGATATGACTGTTGTTTGTA 59.010 34.615 15.86 0.00 0.00 2.41
4008 4586 7.661437 ACACTGTGATATGACTGTTGTTTGTAT 59.339 33.333 15.86 0.00 0.00 2.29
4009 4587 9.150348 CACTGTGATATGACTGTTGTTTGTATA 57.850 33.333 0.32 0.00 0.00 1.47
4010 4588 9.151471 ACTGTGATATGACTGTTGTTTGTATAC 57.849 33.333 0.00 0.00 0.00 1.47
4011 4589 9.371136 CTGTGATATGACTGTTGTTTGTATACT 57.629 33.333 4.17 0.00 0.00 2.12
4033 4611 7.095695 ACTACAACAAGTGCAATTTTAGTGT 57.904 32.000 0.00 1.90 0.00 3.55
4034 4612 8.215926 ACTACAACAAGTGCAATTTTAGTGTA 57.784 30.769 0.00 2.99 0.00 2.90
4035 4613 8.679100 ACTACAACAAGTGCAATTTTAGTGTAA 58.321 29.630 0.00 0.00 0.00 2.41
4036 4614 9.509855 CTACAACAAGTGCAATTTTAGTGTAAA 57.490 29.630 0.00 0.00 0.00 2.01
4037 4615 8.406172 ACAACAAGTGCAATTTTAGTGTAAAG 57.594 30.769 0.00 0.00 0.00 1.85
4038 4616 8.032451 ACAACAAGTGCAATTTTAGTGTAAAGT 58.968 29.630 0.00 0.00 0.00 2.66
4039 4617 8.868916 CAACAAGTGCAATTTTAGTGTAAAGTT 58.131 29.630 0.00 0.00 0.00 2.66
4040 4618 8.406172 ACAAGTGCAATTTTAGTGTAAAGTTG 57.594 30.769 0.00 9.22 43.78 3.16
4041 4619 8.032451 ACAAGTGCAATTTTAGTGTAAAGTTGT 58.968 29.630 0.00 0.00 43.23 3.32
4042 4620 7.985634 AGTGCAATTTTAGTGTAAAGTTGTG 57.014 32.000 13.12 0.00 43.23 3.33
4043 4621 7.543756 AGTGCAATTTTAGTGTAAAGTTGTGT 58.456 30.769 13.12 1.01 43.23 3.72
4044 4622 7.487829 AGTGCAATTTTAGTGTAAAGTTGTGTG 59.512 33.333 13.12 0.00 43.23 3.82
4045 4623 6.254589 TGCAATTTTAGTGTAAAGTTGTGTGC 59.745 34.615 13.12 0.00 43.23 4.57
4046 4624 6.254589 GCAATTTTAGTGTAAAGTTGTGTGCA 59.745 34.615 13.12 0.00 43.23 4.57
4047 4625 7.201478 GCAATTTTAGTGTAAAGTTGTGTGCAA 60.201 33.333 13.12 0.00 43.23 4.08
4048 4626 7.985634 ATTTTAGTGTAAAGTTGTGTGCAAG 57.014 32.000 0.00 0.00 34.94 4.01
4049 4627 6.503589 TTTAGTGTAAAGTTGTGTGCAAGT 57.496 33.333 0.00 0.00 39.76 3.16
4050 4628 6.503589 TTAGTGTAAAGTTGTGTGCAAGTT 57.496 33.333 0.00 0.00 46.77 2.66
4057 4635 4.118093 AGTTGTGTGCAAGTTTTTACCC 57.882 40.909 0.00 0.00 34.84 3.69
4058 4636 3.767131 AGTTGTGTGCAAGTTTTTACCCT 59.233 39.130 0.00 0.00 34.84 4.34
4059 4637 4.221924 AGTTGTGTGCAAGTTTTTACCCTT 59.778 37.500 0.00 0.00 34.84 3.95
4060 4638 4.810191 TGTGTGCAAGTTTTTACCCTTT 57.190 36.364 0.00 0.00 0.00 3.11
4061 4639 5.153950 TGTGTGCAAGTTTTTACCCTTTT 57.846 34.783 0.00 0.00 0.00 2.27
4062 4640 5.172205 TGTGTGCAAGTTTTTACCCTTTTC 58.828 37.500 0.00 0.00 0.00 2.29
4063 4641 5.172205 GTGTGCAAGTTTTTACCCTTTTCA 58.828 37.500 0.00 0.00 0.00 2.69
4064 4642 5.815222 GTGTGCAAGTTTTTACCCTTTTCAT 59.185 36.000 0.00 0.00 0.00 2.57
4065 4643 6.315144 GTGTGCAAGTTTTTACCCTTTTCATT 59.685 34.615 0.00 0.00 0.00 2.57
4066 4644 7.492994 GTGTGCAAGTTTTTACCCTTTTCATTA 59.507 33.333 0.00 0.00 0.00 1.90
4067 4645 8.207545 TGTGCAAGTTTTTACCCTTTTCATTAT 58.792 29.630 0.00 0.00 0.00 1.28
4068 4646 8.708742 GTGCAAGTTTTTACCCTTTTCATTATC 58.291 33.333 0.00 0.00 0.00 1.75
4069 4647 8.424918 TGCAAGTTTTTACCCTTTTCATTATCA 58.575 29.630 0.00 0.00 0.00 2.15
4070 4648 9.435688 GCAAGTTTTTACCCTTTTCATTATCAT 57.564 29.630 0.00 0.00 0.00 2.45
4076 4654 9.768215 TTTTACCCTTTTCATTATCATTCTCCT 57.232 29.630 0.00 0.00 0.00 3.69
4077 4655 9.768215 TTTACCCTTTTCATTATCATTCTCCTT 57.232 29.630 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
127 139 0.621082 GGGATAGATAGGGGCCTTGC 59.379 60.000 0.84 0.00 0.00 4.01
173 185 6.418057 AATCACATTTAAGGCTTGTTTGGA 57.582 33.333 10.69 1.03 0.00 3.53
191 203 7.756272 TGTGATTGATTTGCTTGTCATAATCAC 59.244 33.333 15.82 15.82 40.08 3.06
195 207 6.389091 GGTGTGATTGATTTGCTTGTCATAA 58.611 36.000 0.00 0.00 0.00 1.90
196 208 5.105797 GGGTGTGATTGATTTGCTTGTCATA 60.106 40.000 0.00 0.00 0.00 2.15
246 258 2.922335 GCTTCAACTCGGCAAAATCACC 60.922 50.000 0.00 0.00 0.00 4.02
248 260 2.229792 AGCTTCAACTCGGCAAAATCA 58.770 42.857 0.00 0.00 0.00 2.57
250 262 5.391312 AATTAGCTTCAACTCGGCAAAAT 57.609 34.783 0.00 0.00 0.00 1.82
251 263 4.846779 AATTAGCTTCAACTCGGCAAAA 57.153 36.364 0.00 0.00 0.00 2.44
277 289 1.079266 CAGACCTCAGCCTCAGCAC 60.079 63.158 0.00 0.00 43.56 4.40
279 291 1.516892 CTCAGACCTCAGCCTCAGC 59.483 63.158 0.00 0.00 40.32 4.26
280 292 0.614415 ACCTCAGACCTCAGCCTCAG 60.614 60.000 0.00 0.00 0.00 3.35
281 293 0.902048 CACCTCAGACCTCAGCCTCA 60.902 60.000 0.00 0.00 0.00 3.86
282 294 0.613292 TCACCTCAGACCTCAGCCTC 60.613 60.000 0.00 0.00 0.00 4.70
283 295 0.178921 TTCACCTCAGACCTCAGCCT 60.179 55.000 0.00 0.00 0.00 4.58
284 296 0.687354 TTTCACCTCAGACCTCAGCC 59.313 55.000 0.00 0.00 0.00 4.85
324 336 1.934463 CAGGGCATATGCGACGAAC 59.066 57.895 21.04 6.24 43.26 3.95
344 356 8.986477 ATTTGTAAGAAACTATGCCAATTCAC 57.014 30.769 0.00 0.00 0.00 3.18
377 389 2.812591 CAGCAGGATGTAGGCAATGATC 59.187 50.000 0.00 0.00 39.31 2.92
380 392 2.336945 TCAGCAGGATGTAGGCAATG 57.663 50.000 0.00 0.00 39.31 2.82
395 410 3.429085 CATAAACTTGTGGCGATTCAGC 58.571 45.455 0.00 0.00 0.00 4.26
508 523 0.597637 CGTGGGTGACAGACTGACAC 60.598 60.000 24.20 24.20 41.15 3.67
525 540 3.246112 TGCTGGTAACCCTGGCGT 61.246 61.111 0.00 0.00 34.47 5.68
547 562 0.391130 CGAACGGCAGAATCTTCCCA 60.391 55.000 0.00 0.00 0.00 4.37
631 647 6.319658 GCAAGATGTCAAAGGAAATGGATCTA 59.680 38.462 0.00 0.00 0.00 1.98
693 739 4.517285 AGTCATAAGGCAAGTGTACATGG 58.483 43.478 0.00 0.00 0.00 3.66
709 755 4.443457 GCTGGACTGGCTCATAAAGTCATA 60.443 45.833 4.60 0.00 39.36 2.15
710 756 3.683847 GCTGGACTGGCTCATAAAGTCAT 60.684 47.826 4.60 0.00 39.36 3.06
711 757 2.355108 GCTGGACTGGCTCATAAAGTCA 60.355 50.000 4.60 0.00 41.73 3.41
712 758 2.284190 GCTGGACTGGCTCATAAAGTC 58.716 52.381 0.00 0.00 39.70 3.01
713 759 1.630369 TGCTGGACTGGCTCATAAAGT 59.370 47.619 0.00 0.00 0.00 2.66
714 760 2.012673 GTGCTGGACTGGCTCATAAAG 58.987 52.381 0.00 0.00 0.00 1.85
715 761 1.340017 GGTGCTGGACTGGCTCATAAA 60.340 52.381 0.00 0.00 0.00 1.40
716 762 0.253044 GGTGCTGGACTGGCTCATAA 59.747 55.000 0.00 0.00 0.00 1.90
720 766 1.968540 GTTGGTGCTGGACTGGCTC 60.969 63.158 0.00 0.00 0.00 4.70
730 776 3.825160 ATCACGGCGTGTTGGTGCT 62.825 57.895 35.65 12.75 34.79 4.40
757 803 1.268899 CAAGTTTCTGCCAGCTTCAGG 59.731 52.381 11.60 0.00 32.63 3.86
778 824 7.067859 TCGCTGAACCACATAGGGTATATATAC 59.932 40.741 13.60 13.60 37.53 1.47
867 918 3.687572 TCGTCAGTAGCTCGGTTATTC 57.312 47.619 0.00 0.00 0.00 1.75
868 919 5.061853 TCTATCGTCAGTAGCTCGGTTATT 58.938 41.667 0.00 0.00 0.00 1.40
869 920 4.639334 TCTATCGTCAGTAGCTCGGTTAT 58.361 43.478 0.00 0.00 0.00 1.89
870 921 4.063998 TCTATCGTCAGTAGCTCGGTTA 57.936 45.455 0.00 0.00 0.00 2.85
889 940 9.674824 CGTTATTAACCTGACGTTATCTTATCT 57.325 33.333 0.00 0.00 36.81 1.98
895 946 5.553211 CGCACGTTATTAACCTGACGTTATC 60.553 44.000 9.01 0.00 45.32 1.75
896 947 4.266029 CGCACGTTATTAACCTGACGTTAT 59.734 41.667 9.01 0.00 45.32 1.89
900 951 2.252747 TCGCACGTTATTAACCTGACG 58.747 47.619 9.01 10.66 41.00 4.35
903 954 3.302221 CCGAATCGCACGTTATTAACCTG 60.302 47.826 0.00 1.76 0.00 4.00
904 955 2.861935 CCGAATCGCACGTTATTAACCT 59.138 45.455 0.00 0.00 0.00 3.50
905 956 2.604462 ACCGAATCGCACGTTATTAACC 59.396 45.455 0.00 0.00 0.00 2.85
906 957 3.542680 CCACCGAATCGCACGTTATTAAC 60.543 47.826 0.00 0.00 0.00 2.01
907 958 2.604011 CCACCGAATCGCACGTTATTAA 59.396 45.455 0.00 0.00 0.00 1.40
912 984 1.562575 GAACCACCGAATCGCACGTT 61.563 55.000 0.00 0.00 0.00 3.99
916 988 0.250124 AACTGAACCACCGAATCGCA 60.250 50.000 0.00 0.00 0.00 5.10
921 993 2.168936 ACACAGTAACTGAACCACCGAA 59.831 45.455 0.00 0.00 35.18 4.30
974 1049 0.649475 CGCGAAATCTGCAAGGAGAG 59.351 55.000 0.00 0.00 0.00 3.20
976 1051 0.649475 CTCGCGAAATCTGCAAGGAG 59.351 55.000 11.33 0.00 0.00 3.69
977 1052 0.740868 CCTCGCGAAATCTGCAAGGA 60.741 55.000 11.33 0.00 0.00 3.36
989 1064 1.511305 GTCTCCATCAACCTCGCGA 59.489 57.895 9.26 9.26 0.00 5.87
991 1066 1.519455 CCGTCTCCATCAACCTCGC 60.519 63.158 0.00 0.00 0.00 5.03
1053 1128 3.770040 TCCACGGTGGATCGGCTG 61.770 66.667 25.53 0.00 42.67 4.85
1067 1142 0.902984 TACCTTGAAGCTCCGCTCCA 60.903 55.000 0.00 0.00 38.25 3.86
1073 1148 1.360820 GCGACTTACCTTGAAGCTCC 58.639 55.000 0.00 0.00 0.00 4.70
1075 1150 0.036294 GGGCGACTTACCTTGAAGCT 60.036 55.000 0.00 0.00 0.00 3.74
1076 1151 1.359459 CGGGCGACTTACCTTGAAGC 61.359 60.000 0.00 0.00 0.00 3.86
1082 1157 4.078516 GGCACGGGCGACTTACCT 62.079 66.667 2.17 0.00 42.47 3.08
1093 1182 1.438562 TTGCATGATCGATGGCACGG 61.439 55.000 0.54 0.00 31.99 4.94
1102 1191 0.659427 AAGTCGGCATTGCATGATCG 59.341 50.000 11.39 4.46 0.00 3.69
1169 1258 4.545706 GGGTCGCCATCGCCATGA 62.546 66.667 0.00 0.00 34.88 3.07
1174 1263 3.865929 ATCATCGGGTCGCCATCGC 62.866 63.158 0.00 0.00 35.26 4.58
1175 1264 2.023771 CATCATCGGGTCGCCATCG 61.024 63.158 0.00 0.00 0.00 3.84
1176 1265 1.669115 CCATCATCGGGTCGCCATC 60.669 63.158 0.00 0.00 0.00 3.51
1383 1478 4.430765 GACGGACACCATCGGCGT 62.431 66.667 6.85 0.00 0.00 5.68
1668 1763 0.976253 GCGTCTTCGTCTTCGTCTTC 59.024 55.000 0.00 0.00 39.49 2.87
1669 1764 0.725118 CGCGTCTTCGTCTTCGTCTT 60.725 55.000 0.00 0.00 39.49 3.01
1670 1765 1.154450 CGCGTCTTCGTCTTCGTCT 60.154 57.895 0.00 0.00 39.49 4.18
1671 1766 2.144680 CCGCGTCTTCGTCTTCGTC 61.145 63.158 4.92 0.00 39.49 4.20
1672 1767 2.126965 CCGCGTCTTCGTCTTCGT 60.127 61.111 4.92 0.00 39.49 3.85
1673 1768 3.533691 GCCGCGTCTTCGTCTTCG 61.534 66.667 4.92 0.00 39.49 3.79
1791 1889 4.082274 TCAATGCGTTTAGACATGCAAG 57.918 40.909 0.00 0.00 41.22 4.01
1865 1963 4.710167 TCCTCCGACGACTGGCGA 62.710 66.667 11.23 0.00 44.57 5.54
1890 1997 0.871722 CAATTCTTGTCCGACGGCAA 59.128 50.000 18.40 18.40 0.00 4.52
1907 2014 3.702048 CGGAGGAGGAACGGCCAA 61.702 66.667 2.24 0.00 40.02 4.52
2057 2164 2.741985 CACATGAGCGCCACCGAA 60.742 61.111 2.29 0.00 36.29 4.30
2272 2382 3.449018 CCCGTATATCTTGATCTCCAGGG 59.551 52.174 0.00 0.00 0.00 4.45
2645 2755 1.357334 GAGGTCGATCGAGGTGCTC 59.643 63.158 20.09 5.25 0.00 4.26
2678 2790 3.381908 GGTTATCCACACTGATCGAGACT 59.618 47.826 0.00 0.00 0.00 3.24
2689 2801 1.337823 ACAGCACTCGGTTATCCACAC 60.338 52.381 0.00 0.00 0.00 3.82
2690 2802 0.973632 ACAGCACTCGGTTATCCACA 59.026 50.000 0.00 0.00 0.00 4.17
2691 2803 1.732259 CAACAGCACTCGGTTATCCAC 59.268 52.381 0.00 0.00 0.00 4.02
2692 2804 1.621317 TCAACAGCACTCGGTTATCCA 59.379 47.619 0.00 0.00 0.00 3.41
2697 2809 0.532862 CCACTCAACAGCACTCGGTT 60.533 55.000 0.00 0.00 0.00 4.44
2698 2810 1.069765 CCACTCAACAGCACTCGGT 59.930 57.895 0.00 0.00 0.00 4.69
2700 2812 1.069765 ACCCACTCAACAGCACTCG 59.930 57.895 0.00 0.00 0.00 4.18
2701 2813 1.510480 GCACCCACTCAACAGCACTC 61.510 60.000 0.00 0.00 0.00 3.51
2702 2814 1.526917 GCACCCACTCAACAGCACT 60.527 57.895 0.00 0.00 0.00 4.40
2705 2817 2.263741 CCTGCACCCACTCAACAGC 61.264 63.158 0.00 0.00 0.00 4.40
2712 2843 4.962836 GCACAGCCTGCACCCACT 62.963 66.667 0.00 0.00 46.29 4.00
2848 3113 1.746239 CACGATGCACATGGCCTGA 60.746 57.895 3.32 0.00 43.89 3.86
3044 3312 1.205893 GGCTTCGAGGTCTCTGAATGT 59.794 52.381 0.00 0.00 0.00 2.71
3048 3316 2.701780 GCGGCTTCGAGGTCTCTGA 61.702 63.158 0.00 0.00 35.61 3.27
3116 3402 4.695993 TTCGCCTCGCCACATGCA 62.696 61.111 0.00 0.00 41.33 3.96
3117 3403 3.430862 TTTCGCCTCGCCACATGC 61.431 61.111 0.00 0.00 0.00 4.06
3118 3404 1.851021 TTGTTTCGCCTCGCCACATG 61.851 55.000 0.00 0.00 0.00 3.21
3119 3405 1.169661 TTTGTTTCGCCTCGCCACAT 61.170 50.000 0.00 0.00 0.00 3.21
3120 3406 1.820056 TTTGTTTCGCCTCGCCACA 60.820 52.632 0.00 0.00 0.00 4.17
3121 3407 1.370051 GTTTGTTTCGCCTCGCCAC 60.370 57.895 0.00 0.00 0.00 5.01
3122 3408 1.525077 AGTTTGTTTCGCCTCGCCA 60.525 52.632 0.00 0.00 0.00 5.69
3123 3409 1.082104 CAGTTTGTTTCGCCTCGCC 60.082 57.895 0.00 0.00 0.00 5.54
3124 3410 1.082104 CCAGTTTGTTTCGCCTCGC 60.082 57.895 0.00 0.00 0.00 5.03
3125 3411 0.041312 CACCAGTTTGTTTCGCCTCG 60.041 55.000 0.00 0.00 0.00 4.63
3126 3412 0.310854 CCACCAGTTTGTTTCGCCTC 59.689 55.000 0.00 0.00 0.00 4.70
3127 3413 1.734388 GCCACCAGTTTGTTTCGCCT 61.734 55.000 0.00 0.00 0.00 5.52
3134 3420 0.466189 CCAGTCTGCCACCAGTTTGT 60.466 55.000 0.00 0.00 40.09 2.83
3147 3437 0.608308 TGTCCACGATCGACCAGTCT 60.608 55.000 24.34 0.00 0.00 3.24
3200 3491 4.212636 TCGACCCAAAGAAAATTCTCGAAC 59.787 41.667 0.00 0.00 36.28 3.95
3208 3499 4.275936 CAGTCAACTCGACCCAAAGAAAAT 59.724 41.667 0.00 0.00 46.69 1.82
3215 3506 1.070786 GGCAGTCAACTCGACCCAA 59.929 57.895 0.00 0.00 46.69 4.12
3287 3578 7.025365 CGCGGAAATTACTACAGCATATACTA 58.975 38.462 0.00 0.00 0.00 1.82
3289 3580 5.632347 ACGCGGAAATTACTACAGCATATAC 59.368 40.000 12.47 0.00 0.00 1.47
3291 3582 4.447724 CACGCGGAAATTACTACAGCATAT 59.552 41.667 12.47 0.00 0.00 1.78
3293 3584 2.607635 CACGCGGAAATTACTACAGCAT 59.392 45.455 12.47 0.00 0.00 3.79
3294 3585 1.996898 CACGCGGAAATTACTACAGCA 59.003 47.619 12.47 0.00 0.00 4.41
3295 3586 1.326548 CCACGCGGAAATTACTACAGC 59.673 52.381 12.47 0.00 0.00 4.40
3296 3587 2.347452 CACCACGCGGAAATTACTACAG 59.653 50.000 12.47 0.00 35.59 2.74
3298 3589 1.662122 CCACCACGCGGAAATTACTAC 59.338 52.381 12.47 0.00 35.59 2.73
3300 3591 0.035739 ACCACCACGCGGAAATTACT 59.964 50.000 12.47 0.00 35.59 2.24
3305 3598 2.307611 TACACACCACCACGCGGAAA 62.308 55.000 12.47 0.00 35.59 3.13
3327 3620 5.132985 ACAGCATCTCTCCTACTAAGTCCTA 59.867 44.000 0.00 0.00 0.00 2.94
3364 3887 5.506815 CCGTATCACATACTGTATCACGGTT 60.507 44.000 17.48 0.91 41.02 4.44
3365 3888 4.023450 CCGTATCACATACTGTATCACGGT 60.023 45.833 17.48 0.00 41.02 4.83
3366 3889 4.473199 CCGTATCACATACTGTATCACGG 58.527 47.826 14.53 14.53 40.21 4.94
3367 3890 3.912563 GCCGTATCACATACTGTATCACG 59.087 47.826 0.00 3.59 33.59 4.35
3368 3891 4.917998 CAGCCGTATCACATACTGTATCAC 59.082 45.833 0.00 0.00 33.59 3.06
3369 3892 4.583073 ACAGCCGTATCACATACTGTATCA 59.417 41.667 0.00 0.00 33.59 2.15
3370 3893 5.122512 ACAGCCGTATCACATACTGTATC 57.877 43.478 0.00 0.00 33.59 2.24
3371 3894 5.533528 TGTACAGCCGTATCACATACTGTAT 59.466 40.000 0.00 0.00 31.18 2.29
3372 3895 4.883006 TGTACAGCCGTATCACATACTGTA 59.117 41.667 0.00 0.00 33.59 2.74
3373 3896 3.697542 TGTACAGCCGTATCACATACTGT 59.302 43.478 0.00 0.00 33.59 3.55
3374 3897 4.301637 TGTACAGCCGTATCACATACTG 57.698 45.455 0.00 0.00 33.59 2.74
3377 3900 7.601130 GGATTTATTGTACAGCCGTATCACATA 59.399 37.037 0.00 0.00 0.00 2.29
3409 3968 8.410912 GTCAGTAATGTACCACATACAGATACA 58.589 37.037 11.95 0.00 47.00 2.29
3414 3973 5.972935 TGGTCAGTAATGTACCACATACAG 58.027 41.667 9.46 0.00 47.00 2.74
3432 3991 0.611062 ACGATCTTCCTCGGTGGTCA 60.611 55.000 0.00 0.00 42.88 4.02
3435 3994 0.179134 GTCACGATCTTCCTCGGTGG 60.179 60.000 0.00 0.00 42.88 4.61
3441 4000 2.722201 GCCCGGTCACGATCTTCCT 61.722 63.158 0.00 0.00 44.60 3.36
3459 4018 2.582498 GACGAATGGGGACGAGCG 60.582 66.667 0.00 0.00 0.00 5.03
3462 4021 1.389609 GCTAGGACGAATGGGGACGA 61.390 60.000 0.00 0.00 0.00 4.20
3463 4022 1.067582 GCTAGGACGAATGGGGACG 59.932 63.158 0.00 0.00 0.00 4.79
3510 4086 1.017701 GTACGGGGAAAAGAGCGTGG 61.018 60.000 0.00 0.00 0.00 4.94
3514 4090 2.180432 ACTTGTACGGGGAAAAGAGC 57.820 50.000 0.00 0.00 0.00 4.09
3516 4092 5.867330 TCAATAACTTGTACGGGGAAAAGA 58.133 37.500 0.00 0.00 33.87 2.52
3518 4094 6.956202 TTTCAATAACTTGTACGGGGAAAA 57.044 33.333 0.00 0.00 33.87 2.29
3522 4100 7.371936 TCAAATTTTCAATAACTTGTACGGGG 58.628 34.615 0.00 0.00 33.87 5.73
3582 4160 9.155975 AGTGTAGCTAAAGTGATGTTTTATCTG 57.844 33.333 0.00 0.00 0.00 2.90
3589 4167 6.647067 GTCTTCAGTGTAGCTAAAGTGATGTT 59.353 38.462 23.97 0.00 0.00 2.71
3594 4172 3.365220 GCGTCTTCAGTGTAGCTAAAGTG 59.635 47.826 12.02 12.02 0.00 3.16
3595 4173 3.576648 GCGTCTTCAGTGTAGCTAAAGT 58.423 45.455 0.00 0.00 0.00 2.66
3596 4174 2.924290 GGCGTCTTCAGTGTAGCTAAAG 59.076 50.000 0.00 0.00 0.00 1.85
3597 4175 2.561419 AGGCGTCTTCAGTGTAGCTAAA 59.439 45.455 0.00 0.00 0.00 1.85
3598 4176 2.094700 CAGGCGTCTTCAGTGTAGCTAA 60.095 50.000 0.00 0.00 0.00 3.09
3599 4177 1.472878 CAGGCGTCTTCAGTGTAGCTA 59.527 52.381 0.00 0.00 0.00 3.32
3600 4178 0.244994 CAGGCGTCTTCAGTGTAGCT 59.755 55.000 0.00 0.00 0.00 3.32
3601 4179 0.737715 CCAGGCGTCTTCAGTGTAGC 60.738 60.000 0.00 0.00 0.00 3.58
3602 4180 0.888619 TCCAGGCGTCTTCAGTGTAG 59.111 55.000 0.00 0.00 0.00 2.74
3603 4181 1.334160 TTCCAGGCGTCTTCAGTGTA 58.666 50.000 0.00 0.00 0.00 2.90
3604 4182 0.468226 TTTCCAGGCGTCTTCAGTGT 59.532 50.000 0.00 0.00 0.00 3.55
3605 4183 1.813513 ATTTCCAGGCGTCTTCAGTG 58.186 50.000 0.00 0.00 0.00 3.66
3606 4184 2.568623 AATTTCCAGGCGTCTTCAGT 57.431 45.000 0.00 0.00 0.00 3.41
3607 4185 5.567138 AATTAATTTCCAGGCGTCTTCAG 57.433 39.130 0.00 0.00 0.00 3.02
3608 4186 5.391523 CGAAATTAATTTCCAGGCGTCTTCA 60.392 40.000 27.32 0.00 42.34 3.02
3609 4187 5.028375 CGAAATTAATTTCCAGGCGTCTTC 58.972 41.667 27.32 6.67 42.34 2.87
3610 4188 4.142469 CCGAAATTAATTTCCAGGCGTCTT 60.142 41.667 27.32 0.00 42.34 3.01
3611 4189 3.377172 CCGAAATTAATTTCCAGGCGTCT 59.623 43.478 27.32 0.00 42.34 4.18
3612 4190 3.488553 CCCGAAATTAATTTCCAGGCGTC 60.489 47.826 27.32 8.32 42.34 5.19
3613 4191 2.425668 CCCGAAATTAATTTCCAGGCGT 59.574 45.455 27.32 0.44 42.34 5.68
3614 4192 2.425668 ACCCGAAATTAATTTCCAGGCG 59.574 45.455 28.43 20.37 42.34 5.52
3615 4193 3.445805 TGACCCGAAATTAATTTCCAGGC 59.554 43.478 28.43 23.48 42.34 4.85
3616 4194 4.705023 ACTGACCCGAAATTAATTTCCAGG 59.295 41.667 28.93 28.30 42.34 4.45
3617 4195 5.447279 CGACTGACCCGAAATTAATTTCCAG 60.447 44.000 27.32 26.88 42.34 3.86
3618 4196 4.393680 CGACTGACCCGAAATTAATTTCCA 59.606 41.667 27.32 20.00 42.34 3.53
3619 4197 4.632688 TCGACTGACCCGAAATTAATTTCC 59.367 41.667 27.32 17.28 42.34 3.13
3620 4198 5.789710 TCGACTGACCCGAAATTAATTTC 57.210 39.130 24.91 24.91 42.00 2.17
3621 4199 6.753107 AATCGACTGACCCGAAATTAATTT 57.247 33.333 13.24 13.24 39.62 1.82
3622 4200 6.753107 AAATCGACTGACCCGAAATTAATT 57.247 33.333 0.00 0.00 39.62 1.40
3623 4201 6.753107 AAAATCGACTGACCCGAAATTAAT 57.247 33.333 0.00 0.00 39.62 1.40
3624 4202 6.563222 AAAAATCGACTGACCCGAAATTAA 57.437 33.333 0.00 0.00 39.62 1.40
3646 4224 7.230108 TCAAAGCAAATAATCAATGGCCAAAAA 59.770 29.630 10.96 0.00 0.00 1.94
3647 4225 6.713903 TCAAAGCAAATAATCAATGGCCAAAA 59.286 30.769 10.96 0.00 0.00 2.44
3648 4226 6.236409 TCAAAGCAAATAATCAATGGCCAAA 58.764 32.000 10.96 0.00 0.00 3.28
3649 4227 5.802465 TCAAAGCAAATAATCAATGGCCAA 58.198 33.333 10.96 0.00 0.00 4.52
3650 4228 5.187381 TCTCAAAGCAAATAATCAATGGCCA 59.813 36.000 8.56 8.56 0.00 5.36
3651 4229 5.663456 TCTCAAAGCAAATAATCAATGGCC 58.337 37.500 0.00 0.00 0.00 5.36
3652 4230 7.493320 TGAATCTCAAAGCAAATAATCAATGGC 59.507 33.333 0.00 0.00 0.00 4.40
3653 4231 8.936070 TGAATCTCAAAGCAAATAATCAATGG 57.064 30.769 0.00 0.00 0.00 3.16
3669 4247 9.702494 CAGCTCATAGTACAATATGAATCTCAA 57.298 33.333 6.36 0.00 40.68 3.02
3670 4248 8.309656 CCAGCTCATAGTACAATATGAATCTCA 58.690 37.037 6.36 0.00 40.68 3.27
3671 4249 7.277539 GCCAGCTCATAGTACAATATGAATCTC 59.722 40.741 6.36 0.00 40.68 2.75
3672 4250 7.038445 AGCCAGCTCATAGTACAATATGAATCT 60.038 37.037 6.36 4.50 40.68 2.40
3673 4251 7.102346 AGCCAGCTCATAGTACAATATGAATC 58.898 38.462 6.36 2.81 40.68 2.52
3674 4252 7.013823 AGCCAGCTCATAGTACAATATGAAT 57.986 36.000 6.36 0.00 40.68 2.57
3675 4253 6.425210 AGCCAGCTCATAGTACAATATGAA 57.575 37.500 6.36 0.00 40.68 2.57
3676 4254 6.425210 AAGCCAGCTCATAGTACAATATGA 57.575 37.500 0.00 0.11 39.33 2.15
3677 4255 7.606349 TCTAAGCCAGCTCATAGTACAATATG 58.394 38.462 0.00 0.00 34.96 1.78
3678 4256 7.782897 TCTAAGCCAGCTCATAGTACAATAT 57.217 36.000 0.00 0.00 0.00 1.28
3679 4257 7.782897 ATCTAAGCCAGCTCATAGTACAATA 57.217 36.000 0.00 0.00 0.00 1.90
3680 4258 6.678568 ATCTAAGCCAGCTCATAGTACAAT 57.321 37.500 0.00 0.00 0.00 2.71
3681 4259 6.485830 AATCTAAGCCAGCTCATAGTACAA 57.514 37.500 0.00 0.00 0.00 2.41
3682 4260 6.485830 AAATCTAAGCCAGCTCATAGTACA 57.514 37.500 0.00 0.00 0.00 2.90
3683 4261 6.763610 ACAAAATCTAAGCCAGCTCATAGTAC 59.236 38.462 0.00 0.00 0.00 2.73
3684 4262 6.889198 ACAAAATCTAAGCCAGCTCATAGTA 58.111 36.000 0.00 0.00 0.00 1.82
3685 4263 5.749462 ACAAAATCTAAGCCAGCTCATAGT 58.251 37.500 0.00 0.00 0.00 2.12
3686 4264 6.690194 AACAAAATCTAAGCCAGCTCATAG 57.310 37.500 0.00 0.00 0.00 2.23
3687 4265 7.466746 AAAACAAAATCTAAGCCAGCTCATA 57.533 32.000 0.00 0.00 0.00 2.15
3688 4266 5.990120 AAACAAAATCTAAGCCAGCTCAT 57.010 34.783 0.00 0.00 0.00 2.90
3689 4267 5.789643 AAAACAAAATCTAAGCCAGCTCA 57.210 34.783 0.00 0.00 0.00 4.26
3709 4287 6.127196 GGCCCAAATATATGGTCAGTCAAAAA 60.127 38.462 0.00 0.00 38.91 1.94
3710 4288 5.362430 GGCCCAAATATATGGTCAGTCAAAA 59.638 40.000 0.00 0.00 38.91 2.44
3711 4289 4.892934 GGCCCAAATATATGGTCAGTCAAA 59.107 41.667 0.00 0.00 38.91 2.69
3712 4290 4.079500 TGGCCCAAATATATGGTCAGTCAA 60.080 41.667 0.00 0.00 38.91 3.18
3713 4291 3.461458 TGGCCCAAATATATGGTCAGTCA 59.539 43.478 0.00 0.00 38.91 3.41
3714 4292 4.074970 CTGGCCCAAATATATGGTCAGTC 58.925 47.826 12.09 0.00 38.91 3.51
3715 4293 3.463329 ACTGGCCCAAATATATGGTCAGT 59.537 43.478 17.79 17.79 42.78 3.41
3716 4294 4.074970 GACTGGCCCAAATATATGGTCAG 58.925 47.826 16.73 16.73 41.57 3.51
3717 4295 3.461458 TGACTGGCCCAAATATATGGTCA 59.539 43.478 0.00 0.00 38.91 4.02
3718 4296 4.098914 TGACTGGCCCAAATATATGGTC 57.901 45.455 0.00 0.00 38.91 4.02
3719 4297 4.079212 AGTTGACTGGCCCAAATATATGGT 60.079 41.667 0.00 0.00 38.91 3.55
3720 4298 4.473444 AGTTGACTGGCCCAAATATATGG 58.527 43.478 0.00 0.00 40.35 2.74
3721 4299 5.737063 GCAAGTTGACTGGCCCAAATATATG 60.737 44.000 7.16 0.00 36.93 1.78
3722 4300 4.342092 GCAAGTTGACTGGCCCAAATATAT 59.658 41.667 7.16 0.00 36.93 0.86
3723 4301 3.699038 GCAAGTTGACTGGCCCAAATATA 59.301 43.478 7.16 0.00 36.93 0.86
3724 4302 2.497273 GCAAGTTGACTGGCCCAAATAT 59.503 45.455 7.16 0.00 36.93 1.28
3725 4303 1.892474 GCAAGTTGACTGGCCCAAATA 59.108 47.619 7.16 0.00 36.93 1.40
3726 4304 0.681175 GCAAGTTGACTGGCCCAAAT 59.319 50.000 7.16 0.00 36.93 2.32
3727 4305 0.396974 AGCAAGTTGACTGGCCCAAA 60.397 50.000 7.16 0.00 43.99 3.28
3728 4306 0.476338 TAGCAAGTTGACTGGCCCAA 59.524 50.000 7.16 0.00 43.99 4.12
3729 4307 0.250727 GTAGCAAGTTGACTGGCCCA 60.251 55.000 7.16 0.00 43.99 5.36
3730 4308 0.036875 AGTAGCAAGTTGACTGGCCC 59.963 55.000 7.16 0.00 43.99 5.80
3731 4309 1.443802 GAGTAGCAAGTTGACTGGCC 58.556 55.000 7.16 0.00 43.99 5.36
3732 4310 1.071605 CGAGTAGCAAGTTGACTGGC 58.928 55.000 7.16 2.19 43.26 4.85
3733 4311 1.714794 CCGAGTAGCAAGTTGACTGG 58.285 55.000 7.16 3.51 0.00 4.00
3734 4312 1.071605 GCCGAGTAGCAAGTTGACTG 58.928 55.000 7.16 0.00 0.00 3.51
3735 4313 0.037232 GGCCGAGTAGCAAGTTGACT 60.037 55.000 7.16 1.52 0.00 3.41
3736 4314 1.352156 CGGCCGAGTAGCAAGTTGAC 61.352 60.000 24.07 0.00 0.00 3.18
3737 4315 1.080093 CGGCCGAGTAGCAAGTTGA 60.080 57.895 24.07 0.00 0.00 3.18
3738 4316 0.669318 TTCGGCCGAGTAGCAAGTTG 60.669 55.000 29.20 0.00 0.00 3.16
3739 4317 0.389948 CTTCGGCCGAGTAGCAAGTT 60.390 55.000 29.20 0.00 0.00 2.66
3740 4318 1.215647 CTTCGGCCGAGTAGCAAGT 59.784 57.895 29.20 0.00 0.00 3.16
3741 4319 2.167861 GCTTCGGCCGAGTAGCAAG 61.168 63.158 35.61 26.74 33.88 4.01
3742 4320 2.125673 GCTTCGGCCGAGTAGCAA 60.126 61.111 35.61 18.93 33.88 3.91
3753 4331 2.895372 GGCATACGTGGGCTTCGG 60.895 66.667 12.14 0.00 0.00 4.30
3754 4332 3.261951 CGGCATACGTGGGCTTCG 61.262 66.667 12.14 5.62 37.93 3.79
3778 4356 3.721706 AAAGGGGCAGAGGCGAGG 61.722 66.667 0.00 0.00 42.47 4.63
3779 4357 2.437359 CAAAGGGGCAGAGGCGAG 60.437 66.667 0.00 0.00 42.47 5.03
3780 4358 2.351924 AAACAAAGGGGCAGAGGCGA 62.352 55.000 0.00 0.00 42.47 5.54
3781 4359 1.463553 AAAACAAAGGGGCAGAGGCG 61.464 55.000 0.00 0.00 42.47 5.52
3782 4360 0.758734 AAAAACAAAGGGGCAGAGGC 59.241 50.000 0.00 0.00 40.13 4.70
3783 4361 2.319844 AGAAAAACAAAGGGGCAGAGG 58.680 47.619 0.00 0.00 0.00 3.69
3784 4362 4.406648 AAAGAAAAACAAAGGGGCAGAG 57.593 40.909 0.00 0.00 0.00 3.35
3785 4363 5.941555 TTAAAGAAAAACAAAGGGGCAGA 57.058 34.783 0.00 0.00 0.00 4.26
3786 4364 6.821160 TCTTTTAAAGAAAAACAAAGGGGCAG 59.179 34.615 4.77 0.00 34.16 4.85
3787 4365 6.712276 TCTTTTAAAGAAAAACAAAGGGGCA 58.288 32.000 4.77 0.00 34.16 5.36
3788 4366 7.618502 TTCTTTTAAAGAAAAACAAAGGGGC 57.381 32.000 16.64 0.00 44.10 5.80
3801 4379 9.912634 CACATAAAGGCAGATTTCTTTTAAAGA 57.087 29.630 2.94 2.94 35.22 2.52
3802 4380 9.696917 ACACATAAAGGCAGATTTCTTTTAAAG 57.303 29.630 0.00 0.00 35.22 1.85
3805 4383 9.691362 GAAACACATAAAGGCAGATTTCTTTTA 57.309 29.630 0.00 0.00 35.22 1.52
3806 4384 8.424133 AGAAACACATAAAGGCAGATTTCTTTT 58.576 29.630 0.00 0.00 32.64 2.27
3807 4385 7.955918 AGAAACACATAAAGGCAGATTTCTTT 58.044 30.769 0.00 0.00 32.64 2.52
3808 4386 7.530426 AGAAACACATAAAGGCAGATTTCTT 57.470 32.000 0.00 0.00 32.64 2.52
3809 4387 7.449704 AGAAGAAACACATAAAGGCAGATTTCT 59.550 33.333 0.00 0.00 36.88 2.52
3810 4388 7.597386 AGAAGAAACACATAAAGGCAGATTTC 58.403 34.615 0.00 0.00 0.00 2.17
3811 4389 7.530426 AGAAGAAACACATAAAGGCAGATTT 57.470 32.000 0.00 0.00 0.00 2.17
3812 4390 7.530426 AAGAAGAAACACATAAAGGCAGATT 57.470 32.000 0.00 0.00 0.00 2.40
3813 4391 7.530426 AAAGAAGAAACACATAAAGGCAGAT 57.470 32.000 0.00 0.00 0.00 2.90
3814 4392 6.959639 AAAGAAGAAACACATAAAGGCAGA 57.040 33.333 0.00 0.00 0.00 4.26
3815 4393 6.980397 ACAAAAGAAGAAACACATAAAGGCAG 59.020 34.615 0.00 0.00 0.00 4.85
3816 4394 6.872920 ACAAAAGAAGAAACACATAAAGGCA 58.127 32.000 0.00 0.00 0.00 4.75
3817 4395 7.770801 AACAAAAGAAGAAACACATAAAGGC 57.229 32.000 0.00 0.00 0.00 4.35
3841 4419 8.758715 CAAACAATTTTCCAGCAAAAACAAAAA 58.241 25.926 0.00 0.00 37.52 1.94
3842 4420 7.922811 ACAAACAATTTTCCAGCAAAAACAAAA 59.077 25.926 0.00 0.00 37.52 2.44
3843 4421 7.428826 ACAAACAATTTTCCAGCAAAAACAAA 58.571 26.923 0.00 0.00 37.52 2.83
3844 4422 6.974965 ACAAACAATTTTCCAGCAAAAACAA 58.025 28.000 0.00 0.00 37.52 2.83
3845 4423 6.566197 ACAAACAATTTTCCAGCAAAAACA 57.434 29.167 0.00 0.00 37.52 2.83
3846 4424 7.865875 AAACAAACAATTTTCCAGCAAAAAC 57.134 28.000 0.00 0.00 37.52 2.43
3847 4425 8.877808 AAAAACAAACAATTTTCCAGCAAAAA 57.122 23.077 0.00 0.00 37.52 1.94
3879 4457 9.745018 AGAGAATAAAATCCAACTGATGAAGAA 57.255 29.630 0.00 0.00 32.68 2.52
3880 4458 9.745018 AAGAGAATAAAATCCAACTGATGAAGA 57.255 29.630 0.00 0.00 32.68 2.87
3882 4460 9.745018 AGAAGAGAATAAAATCCAACTGATGAA 57.255 29.630 0.00 0.00 32.68 2.57
3883 4461 9.745018 AAGAAGAGAATAAAATCCAACTGATGA 57.255 29.630 0.00 0.00 32.68 2.92
3885 4463 9.972106 AGAAGAAGAGAATAAAATCCAACTGAT 57.028 29.630 0.00 0.00 34.22 2.90
3886 4464 9.224267 CAGAAGAAGAGAATAAAATCCAACTGA 57.776 33.333 0.00 0.00 0.00 3.41
3887 4465 9.007901 ACAGAAGAAGAGAATAAAATCCAACTG 57.992 33.333 0.00 0.00 0.00 3.16
3900 4478 9.672673 CCCAAAAATATCTACAGAAGAAGAGAA 57.327 33.333 0.00 0.00 37.89 2.87
3901 4479 8.826765 ACCCAAAAATATCTACAGAAGAAGAGA 58.173 33.333 0.00 0.00 37.89 3.10
3902 4480 8.887717 CACCCAAAAATATCTACAGAAGAAGAG 58.112 37.037 0.00 0.00 37.89 2.85
3903 4481 8.383175 ACACCCAAAAATATCTACAGAAGAAGA 58.617 33.333 0.00 0.00 37.89 2.87
3904 4482 8.567285 ACACCCAAAAATATCTACAGAAGAAG 57.433 34.615 0.00 0.00 37.89 2.85
3905 4483 8.792633 CAACACCCAAAAATATCTACAGAAGAA 58.207 33.333 0.00 0.00 37.89 2.52
3906 4484 7.393234 CCAACACCCAAAAATATCTACAGAAGA 59.607 37.037 0.00 0.00 39.02 2.87
3907 4485 7.362920 CCCAACACCCAAAAATATCTACAGAAG 60.363 40.741 0.00 0.00 0.00 2.85
3908 4486 6.435904 CCCAACACCCAAAAATATCTACAGAA 59.564 38.462 0.00 0.00 0.00 3.02
3909 4487 5.949354 CCCAACACCCAAAAATATCTACAGA 59.051 40.000 0.00 0.00 0.00 3.41
3910 4488 5.714806 ACCCAACACCCAAAAATATCTACAG 59.285 40.000 0.00 0.00 0.00 2.74
3911 4489 5.478679 CACCCAACACCCAAAAATATCTACA 59.521 40.000 0.00 0.00 0.00 2.74
3912 4490 5.712917 TCACCCAACACCCAAAAATATCTAC 59.287 40.000 0.00 0.00 0.00 2.59
3913 4491 5.893500 TCACCCAACACCCAAAAATATCTA 58.106 37.500 0.00 0.00 0.00 1.98
3914 4492 4.746466 TCACCCAACACCCAAAAATATCT 58.254 39.130 0.00 0.00 0.00 1.98
3915 4493 4.526650 ACTCACCCAACACCCAAAAATATC 59.473 41.667 0.00 0.00 0.00 1.63
3916 4494 4.283212 CACTCACCCAACACCCAAAAATAT 59.717 41.667 0.00 0.00 0.00 1.28
3917 4495 3.639094 CACTCACCCAACACCCAAAAATA 59.361 43.478 0.00 0.00 0.00 1.40
3918 4496 2.433970 CACTCACCCAACACCCAAAAAT 59.566 45.455 0.00 0.00 0.00 1.82
3919 4497 1.827969 CACTCACCCAACACCCAAAAA 59.172 47.619 0.00 0.00 0.00 1.94
3920 4498 1.272760 ACACTCACCCAACACCCAAAA 60.273 47.619 0.00 0.00 0.00 2.44
3921 4499 0.333312 ACACTCACCCAACACCCAAA 59.667 50.000 0.00 0.00 0.00 3.28
3922 4500 1.214217 TACACTCACCCAACACCCAA 58.786 50.000 0.00 0.00 0.00 4.12
3923 4501 1.214217 TTACACTCACCCAACACCCA 58.786 50.000 0.00 0.00 0.00 4.51
3924 4502 2.351706 TTTACACTCACCCAACACCC 57.648 50.000 0.00 0.00 0.00 4.61
3925 4503 3.482436 TCATTTACACTCACCCAACACC 58.518 45.455 0.00 0.00 0.00 4.16
3926 4504 5.705609 ATTCATTTACACTCACCCAACAC 57.294 39.130 0.00 0.00 0.00 3.32
3927 4505 6.299922 TGTATTCATTTACACTCACCCAACA 58.700 36.000 0.00 0.00 0.00 3.33
3928 4506 6.811253 TGTATTCATTTACACTCACCCAAC 57.189 37.500 0.00 0.00 0.00 3.77
3929 4507 8.103935 TGTATGTATTCATTTACACTCACCCAA 58.896 33.333 0.00 0.00 35.04 4.12
3930 4508 7.625469 TGTATGTATTCATTTACACTCACCCA 58.375 34.615 0.00 0.00 35.04 4.51
3931 4509 8.677148 ATGTATGTATTCATTTACACTCACCC 57.323 34.615 0.00 0.00 35.04 4.61
3962 4540 8.673711 ACAGTGTAATTTTCGCACATATTGTAT 58.326 29.630 0.00 0.00 35.75 2.29
3963 4541 7.960195 CACAGTGTAATTTTCGCACATATTGTA 59.040 33.333 0.00 0.00 35.75 2.41
3964 4542 6.801377 CACAGTGTAATTTTCGCACATATTGT 59.199 34.615 0.00 0.00 35.75 2.71
3965 4543 7.020602 TCACAGTGTAATTTTCGCACATATTG 58.979 34.615 0.00 0.00 35.75 1.90
3966 4544 7.139896 TCACAGTGTAATTTTCGCACATATT 57.860 32.000 0.00 0.00 35.75 1.28
3967 4545 6.735678 TCACAGTGTAATTTTCGCACATAT 57.264 33.333 0.00 0.00 35.75 1.78
3968 4546 6.735678 ATCACAGTGTAATTTTCGCACATA 57.264 33.333 0.00 0.00 35.75 2.29
3969 4547 5.627499 ATCACAGTGTAATTTTCGCACAT 57.373 34.783 0.00 0.00 35.75 3.21
3970 4548 6.370166 TCATATCACAGTGTAATTTTCGCACA 59.630 34.615 0.00 0.00 35.75 4.57
3971 4549 6.682863 GTCATATCACAGTGTAATTTTCGCAC 59.317 38.462 0.00 0.00 0.00 5.34
3972 4550 6.593770 AGTCATATCACAGTGTAATTTTCGCA 59.406 34.615 0.00 0.00 0.00 5.10
3973 4551 6.901887 CAGTCATATCACAGTGTAATTTTCGC 59.098 38.462 0.00 0.00 0.00 4.70
3974 4552 7.963981 ACAGTCATATCACAGTGTAATTTTCG 58.036 34.615 0.00 0.00 0.00 3.46
3975 4553 9.546909 CAACAGTCATATCACAGTGTAATTTTC 57.453 33.333 0.00 0.00 0.00 2.29
3976 4554 9.066892 ACAACAGTCATATCACAGTGTAATTTT 57.933 29.630 0.00 0.00 0.00 1.82
3977 4555 8.621532 ACAACAGTCATATCACAGTGTAATTT 57.378 30.769 0.00 0.00 0.00 1.82
3978 4556 8.621532 AACAACAGTCATATCACAGTGTAATT 57.378 30.769 0.00 0.00 0.00 1.40
3979 4557 8.506437 CAAACAACAGTCATATCACAGTGTAAT 58.494 33.333 0.00 0.00 0.00 1.89
3980 4558 7.497579 ACAAACAACAGTCATATCACAGTGTAA 59.502 33.333 0.00 0.00 0.00 2.41
3981 4559 6.989759 ACAAACAACAGTCATATCACAGTGTA 59.010 34.615 0.00 0.00 0.00 2.90
3982 4560 5.822519 ACAAACAACAGTCATATCACAGTGT 59.177 36.000 0.00 0.00 0.00 3.55
3983 4561 6.304356 ACAAACAACAGTCATATCACAGTG 57.696 37.500 0.00 0.00 0.00 3.66
3984 4562 9.151471 GTATACAAACAACAGTCATATCACAGT 57.849 33.333 0.00 0.00 0.00 3.55
3985 4563 9.371136 AGTATACAAACAACAGTCATATCACAG 57.629 33.333 5.50 0.00 0.00 3.66
4007 4585 8.846211 ACACTAAAATTGCACTTGTTGTAGTAT 58.154 29.630 0.00 0.00 0.00 2.12
4008 4586 8.215926 ACACTAAAATTGCACTTGTTGTAGTA 57.784 30.769 0.00 0.00 0.00 1.82
4009 4587 7.095695 ACACTAAAATTGCACTTGTTGTAGT 57.904 32.000 0.00 0.00 0.00 2.73
4010 4588 9.509855 TTTACACTAAAATTGCACTTGTTGTAG 57.490 29.630 0.00 0.00 0.00 2.74
4011 4589 9.509855 CTTTACACTAAAATTGCACTTGTTGTA 57.490 29.630 0.00 0.00 0.00 2.41
4012 4590 8.032451 ACTTTACACTAAAATTGCACTTGTTGT 58.968 29.630 0.00 0.00 0.00 3.32
4013 4591 8.406172 ACTTTACACTAAAATTGCACTTGTTG 57.594 30.769 0.00 0.00 0.00 3.33
4014 4592 8.868916 CAACTTTACACTAAAATTGCACTTGTT 58.131 29.630 0.00 0.00 29.79 2.83
4015 4593 8.032451 ACAACTTTACACTAAAATTGCACTTGT 58.968 29.630 0.00 0.00 38.14 3.16
4016 4594 8.320295 CACAACTTTACACTAAAATTGCACTTG 58.680 33.333 0.00 0.00 38.14 3.16
4017 4595 8.032451 ACACAACTTTACACTAAAATTGCACTT 58.968 29.630 0.00 0.00 38.14 3.16
4018 4596 7.487829 CACACAACTTTACACTAAAATTGCACT 59.512 33.333 0.00 0.00 38.14 4.40
4019 4597 7.608755 CACACAACTTTACACTAAAATTGCAC 58.391 34.615 0.00 0.00 38.14 4.57
4020 4598 6.254589 GCACACAACTTTACACTAAAATTGCA 59.745 34.615 0.00 0.00 38.14 4.08
4021 4599 6.254589 TGCACACAACTTTACACTAAAATTGC 59.745 34.615 0.00 0.00 38.14 3.56
4022 4600 7.748031 TGCACACAACTTTACACTAAAATTG 57.252 32.000 0.00 0.00 39.83 2.32
4023 4601 8.032451 ACTTGCACACAACTTTACACTAAAATT 58.968 29.630 0.00 0.00 0.00 1.82
4024 4602 7.543756 ACTTGCACACAACTTTACACTAAAAT 58.456 30.769 0.00 0.00 0.00 1.82
4025 4603 6.915349 ACTTGCACACAACTTTACACTAAAA 58.085 32.000 0.00 0.00 0.00 1.52
4026 4604 6.503589 ACTTGCACACAACTTTACACTAAA 57.496 33.333 0.00 0.00 0.00 1.85
4027 4605 6.503589 AACTTGCACACAACTTTACACTAA 57.496 33.333 0.00 0.00 0.00 2.24
4028 4606 6.503589 AAACTTGCACACAACTTTACACTA 57.496 33.333 0.00 0.00 0.00 2.74
4029 4607 5.385509 AAACTTGCACACAACTTTACACT 57.614 34.783 0.00 0.00 0.00 3.55
4030 4608 6.460664 AAAAACTTGCACACAACTTTACAC 57.539 33.333 0.00 0.00 0.00 2.90
4031 4609 6.586844 GGTAAAAACTTGCACACAACTTTACA 59.413 34.615 13.16 0.00 35.00 2.41
4032 4610 6.035220 GGGTAAAAACTTGCACACAACTTTAC 59.965 38.462 0.00 0.00 33.94 2.01
4033 4611 6.071278 AGGGTAAAAACTTGCACACAACTTTA 60.071 34.615 0.00 0.00 0.00 1.85
4034 4612 4.932799 GGGTAAAAACTTGCACACAACTTT 59.067 37.500 0.00 0.00 0.00 2.66
4035 4613 4.221924 AGGGTAAAAACTTGCACACAACTT 59.778 37.500 0.00 0.00 0.00 2.66
4036 4614 3.767131 AGGGTAAAAACTTGCACACAACT 59.233 39.130 0.00 0.00 0.00 3.16
4037 4615 4.118093 AGGGTAAAAACTTGCACACAAC 57.882 40.909 0.00 0.00 0.00 3.32
4038 4616 4.810191 AAGGGTAAAAACTTGCACACAA 57.190 36.364 0.00 0.00 0.00 3.33
4039 4617 4.810191 AAAGGGTAAAAACTTGCACACA 57.190 36.364 0.00 0.00 0.00 3.72
4040 4618 5.172205 TGAAAAGGGTAAAAACTTGCACAC 58.828 37.500 0.00 0.00 0.00 3.82
4041 4619 5.407407 TGAAAAGGGTAAAAACTTGCACA 57.593 34.783 0.00 0.00 0.00 4.57
4042 4620 6.918892 AATGAAAAGGGTAAAAACTTGCAC 57.081 33.333 0.00 0.00 0.00 4.57
4043 4621 8.424918 TGATAATGAAAAGGGTAAAAACTTGCA 58.575 29.630 0.00 0.00 0.00 4.08
4044 4622 8.825667 TGATAATGAAAAGGGTAAAAACTTGC 57.174 30.769 0.00 0.00 0.00 4.01
4050 4628 9.768215 AGGAGAATGATAATGAAAAGGGTAAAA 57.232 29.630 0.00 0.00 0.00 1.52
4051 4629 9.768215 AAGGAGAATGATAATGAAAAGGGTAAA 57.232 29.630 0.00 0.00 0.00 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.