Multiple sequence alignment - TraesCS3A01G150900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G150900 chr3A 100.000 6250 0 0 667 6916 137911853 137918102 0.000000e+00 11542.0
1 TraesCS3A01G150900 chr3A 88.571 1015 71 20 3717 4726 741128852 741127878 0.000000e+00 1190.0
2 TraesCS3A01G150900 chr3A 87.390 682 49 11 3717 4393 555833665 555833016 0.000000e+00 749.0
3 TraesCS3A01G150900 chr3A 100.000 324 0 0 1 324 137911187 137911510 3.570000e-167 599.0
4 TraesCS3A01G150900 chr3A 90.379 343 17 12 4386 4725 555832007 555831678 2.960000e-118 436.0
5 TraesCS3A01G150900 chr3A 80.968 310 34 13 3714 4008 603279254 603279553 9.030000e-54 222.0
6 TraesCS3A01G150900 chr3A 91.729 133 11 0 3225 3357 420739494 420739362 1.180000e-42 185.0
7 TraesCS3A01G150900 chr3A 91.339 127 11 0 3222 3348 621323739 621323865 2.560000e-39 174.0
8 TraesCS3A01G150900 chr3A 89.630 135 13 1 3222 3355 332556166 332556300 3.320000e-38 171.0
9 TraesCS3A01G150900 chr3A 92.453 53 4 0 925 977 743980650 743980702 7.440000e-10 76.8
10 TraesCS3A01G150900 chr3D 92.916 1468 67 16 976 2409 127334993 127336457 0.000000e+00 2100.0
11 TraesCS3A01G150900 chr3D 93.568 1306 69 2 2405 3710 127341902 127343192 0.000000e+00 1932.0
12 TraesCS3A01G150900 chr3D 92.120 901 47 13 5114 6005 127343195 127344080 0.000000e+00 1249.0
13 TraesCS3A01G150900 chr3D 87.197 1031 68 31 3713 4727 37487297 37486315 0.000000e+00 1114.0
14 TraesCS3A01G150900 chr3D 90.713 603 31 12 6007 6605 127344179 127344760 0.000000e+00 780.0
15 TraesCS3A01G150900 chr3D 91.265 332 6 5 6583 6893 127344766 127345095 1.380000e-116 431.0
16 TraesCS3A01G150900 chr3D 90.441 136 13 0 3222 3357 311668802 311668937 5.510000e-41 180.0
17 TraesCS3A01G150900 chr3D 88.889 135 14 1 3222 3355 251316138 251316004 1.540000e-36 165.0
18 TraesCS3A01G150900 chr3D 94.231 52 3 0 870 921 565644900 565644849 5.750000e-11 80.5
19 TraesCS3A01G150900 chr3B 91.383 1555 84 16 5114 6646 181496873 181498399 0.000000e+00 2084.0
20 TraesCS3A01G150900 chr3B 90.854 831 38 11 1747 2552 181494892 181495709 0.000000e+00 1079.0
21 TraesCS3A01G150900 chr3B 85.980 1020 105 20 3717 4725 431253327 431252335 0.000000e+00 1057.0
22 TraesCS3A01G150900 chr3B 89.660 648 39 12 974 1609 181493928 181494559 0.000000e+00 800.0
23 TraesCS3A01G150900 chr3B 95.171 497 23 1 2579 3074 181495703 181496199 0.000000e+00 784.0
24 TraesCS3A01G150900 chr3B 93.947 380 18 1 3337 3711 181496492 181496871 2.800000e-158 569.0
25 TraesCS3A01G150900 chr3B 93.796 274 7 4 6647 6915 181500178 181500446 3.000000e-108 403.0
26 TraesCS3A01G150900 chr3B 91.981 212 16 1 3072 3282 181496280 181496491 5.240000e-76 296.0
27 TraesCS3A01G150900 chr3B 90.164 61 6 0 858 918 736417885 736417945 5.750000e-11 80.5
28 TraesCS3A01G150900 chr3B 97.297 37 1 0 1700 1736 181494810 181494846 5.790000e-06 63.9
29 TraesCS3A01G150900 chr7D 88.000 1025 58 28 3717 4725 548052608 548053583 0.000000e+00 1151.0
30 TraesCS3A01G150900 chr7D 87.805 1025 53 33 3717 4725 487762317 487761349 0.000000e+00 1134.0
31 TraesCS3A01G150900 chr7D 95.515 379 13 2 4733 5111 43616855 43617229 2.760000e-168 603.0
32 TraesCS3A01G150900 chr7D 95.872 218 8 1 4895 5111 439473706 439473923 1.100000e-92 351.0
33 TraesCS3A01G150900 chr7D 95.192 208 8 2 4727 4933 439473499 439473705 1.860000e-85 327.0
34 TraesCS3A01G150900 chr7D 85.106 94 9 3 3918 4008 574674445 574674536 2.660000e-14 91.6
35 TraesCS3A01G150900 chr7D 93.878 49 3 0 870 918 62100619 62100667 2.680000e-09 75.0
36 TraesCS3A01G150900 chr7A 87.144 1019 63 23 3720 4726 12746208 12747170 0.000000e+00 1094.0
37 TraesCS3A01G150900 chr1B 86.849 768 47 23 3717 4477 9585789 9586509 0.000000e+00 809.0
38 TraesCS3A01G150900 chr2A 87.647 680 42 15 3718 4393 428090968 428090327 0.000000e+00 752.0
39 TraesCS3A01G150900 chr2A 89.826 344 19 11 4386 4726 428089474 428089144 1.780000e-115 427.0
40 TraesCS3A01G150900 chr2A 96.313 217 8 0 4895 5111 238005427 238005643 2.370000e-94 357.0
41 TraesCS3A01G150900 chr2A 95.567 203 6 1 4731 4933 238009603 238009802 8.650000e-84 322.0
42 TraesCS3A01G150900 chr2A 95.522 201 6 1 4733 4933 238005229 238005426 1.120000e-82 318.0
43 TraesCS3A01G150900 chr2A 91.406 128 10 1 3222 3349 144653823 144653697 2.560000e-39 174.0
44 TraesCS3A01G150900 chr2A 88.406 138 16 0 3221 3358 527913921 527913784 4.290000e-37 167.0
45 TraesCS3A01G150900 chr2A 90.909 55 4 1 868 922 572452960 572453013 9.620000e-09 73.1
46 TraesCS3A01G150900 chr1A 87.390 682 48 13 3710 4386 23150920 23151568 0.000000e+00 749.0
47 TraesCS3A01G150900 chr1A 94.444 252 12 2 667 918 14479030 14478781 3.030000e-103 387.0
48 TraesCS3A01G150900 chr1A 98.851 87 1 0 1 87 14479684 14479598 9.290000e-34 156.0
49 TraesCS3A01G150900 chr5A 87.225 681 45 15 3717 4393 670421833 670422475 0.000000e+00 737.0
50 TraesCS3A01G150900 chr5A 83.791 765 75 25 3717 4464 529844009 529843277 0.000000e+00 680.0
51 TraesCS3A01G150900 chr5D 82.155 891 90 31 3717 4585 416764683 416763840 0.000000e+00 701.0
52 TraesCS3A01G150900 chr5D 96.296 216 7 1 4896 5111 225263091 225263305 3.070000e-93 353.0
53 TraesCS3A01G150900 chr5D 83.442 308 30 9 3717 4008 322189733 322189431 4.110000e-67 267.0
54 TraesCS3A01G150900 chr5D 86.957 69 8 1 854 922 207172240 207172307 7.440000e-10 76.8
55 TraesCS3A01G150900 chr6D 87.565 579 58 10 3988 4560 380398083 380398653 0.000000e+00 658.0
56 TraesCS3A01G150900 chr2D 96.042 379 12 1 4733 5111 621040529 621040904 1.270000e-171 614.0
57 TraesCS3A01G150900 chr2D 95.276 381 15 1 4731 5111 621045196 621045573 9.930000e-168 601.0
58 TraesCS3A01G150900 chr1D 95.550 382 14 1 4731 5112 65597344 65596966 5.930000e-170 608.0
59 TraesCS3A01G150900 chr1D 82.692 312 32 12 3712 4006 47639021 47639327 2.480000e-64 257.0
60 TraesCS3A01G150900 chr1D 82.848 309 32 12 3716 4008 463531178 463531481 2.480000e-64 257.0
61 TraesCS3A01G150900 chr1D 80.087 231 29 9 3792 4008 421553 421780 9.290000e-34 156.0
62 TraesCS3A01G150900 chr1D 98.182 55 1 0 923 977 441654190 441654244 5.710000e-16 97.1
63 TraesCS3A01G150900 chr1D 90.164 61 6 0 862 922 453082531 453082591 5.750000e-11 80.5
64 TraesCS3A01G150900 chr4A 95.515 379 15 2 4733 5111 653081644 653081268 7.670000e-169 604.0
65 TraesCS3A01G150900 chr4A 91.525 236 15 4 3715 3946 17102789 17102555 3.110000e-83 320.0
66 TraesCS3A01G150900 chr4A 91.270 126 10 1 3223 3348 477033207 477033331 3.320000e-38 171.0
67 TraesCS3A01G150900 chr4A 100.000 30 0 0 948 977 112721840 112721811 1.000000e-03 56.5
68 TraesCS3A01G150900 chr6B 92.573 377 24 2 4735 5111 9916682 9916310 7.890000e-149 538.0
69 TraesCS3A01G150900 chr2B 85.797 345 19 13 3716 4055 425423917 425424236 8.590000e-89 339.0
70 TraesCS3A01G150900 chr2B 81.169 308 36 12 3717 4008 599257962 599257661 1.940000e-55 228.0
71 TraesCS3A01G150900 chr2B 90.164 61 6 0 858 918 296051164 296051224 5.750000e-11 80.5
72 TraesCS3A01G150900 chr4B 95.918 49 2 0 870 918 16558214 16558262 5.750000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G150900 chr3A 137911187 137918102 6915 False 6070.500000 11542 100.000000 1 6916 2 chr3A.!!$F5 6915
1 TraesCS3A01G150900 chr3A 741127878 741128852 974 True 1190.000000 1190 88.571000 3717 4726 1 chr3A.!!$R2 1009
2 TraesCS3A01G150900 chr3A 555831678 555833665 1987 True 592.500000 749 88.884500 3717 4725 2 chr3A.!!$R3 1008
3 TraesCS3A01G150900 chr3D 127334993 127336457 1464 False 2100.000000 2100 92.916000 976 2409 1 chr3D.!!$F1 1433
4 TraesCS3A01G150900 chr3D 37486315 37487297 982 True 1114.000000 1114 87.197000 3713 4727 1 chr3D.!!$R1 1014
5 TraesCS3A01G150900 chr3D 127341902 127345095 3193 False 1098.000000 1932 91.916500 2405 6893 4 chr3D.!!$F3 4488
6 TraesCS3A01G150900 chr3B 431252335 431253327 992 True 1057.000000 1057 85.980000 3717 4725 1 chr3B.!!$R1 1008
7 TraesCS3A01G150900 chr3B 181493928 181500446 6518 False 759.862500 2084 93.011125 974 6915 8 chr3B.!!$F2 5941
8 TraesCS3A01G150900 chr7D 548052608 548053583 975 False 1151.000000 1151 88.000000 3717 4725 1 chr7D.!!$F3 1008
9 TraesCS3A01G150900 chr7D 487761349 487762317 968 True 1134.000000 1134 87.805000 3717 4725 1 chr7D.!!$R1 1008
10 TraesCS3A01G150900 chr7A 12746208 12747170 962 False 1094.000000 1094 87.144000 3720 4726 1 chr7A.!!$F1 1006
11 TraesCS3A01G150900 chr1B 9585789 9586509 720 False 809.000000 809 86.849000 3717 4477 1 chr1B.!!$F1 760
12 TraesCS3A01G150900 chr2A 428089144 428090968 1824 True 589.500000 752 88.736500 3718 4726 2 chr2A.!!$R3 1008
13 TraesCS3A01G150900 chr2A 238005229 238009802 4573 False 332.333333 357 95.800667 4731 5111 3 chr2A.!!$F2 380
14 TraesCS3A01G150900 chr1A 23150920 23151568 648 False 749.000000 749 87.390000 3710 4386 1 chr1A.!!$F1 676
15 TraesCS3A01G150900 chr1A 14478781 14479684 903 True 271.500000 387 96.647500 1 918 2 chr1A.!!$R1 917
16 TraesCS3A01G150900 chr5A 670421833 670422475 642 False 737.000000 737 87.225000 3717 4393 1 chr5A.!!$F1 676
17 TraesCS3A01G150900 chr5A 529843277 529844009 732 True 680.000000 680 83.791000 3717 4464 1 chr5A.!!$R1 747
18 TraesCS3A01G150900 chr5D 416763840 416764683 843 True 701.000000 701 82.155000 3717 4585 1 chr5D.!!$R2 868
19 TraesCS3A01G150900 chr6D 380398083 380398653 570 False 658.000000 658 87.565000 3988 4560 1 chr6D.!!$F1 572

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
90 91 0.036732 AGCTTTGCCGGATCAGTTCA 59.963 50.0 5.05 0.00 0.00 3.18 F
95 96 0.037326 TGCCGGATCAGTTCAGTCAC 60.037 55.0 5.05 0.00 0.00 3.67 F
96 97 0.037326 GCCGGATCAGTTCAGTCACA 60.037 55.0 5.05 0.00 0.00 3.58 F
1595 1615 0.675837 GTTTCGGTAGGAGCAACCCC 60.676 60.0 0.00 0.00 40.05 4.95 F
2559 2801 0.607489 ATGCAGACCTGTTCCACAGC 60.607 55.0 0.00 0.00 44.63 4.40 F
3122 3448 1.210538 TGCCTAGTCCTCTCGACCTA 58.789 55.0 0.00 0.00 43.08 3.08 F
4537 6823 0.249489 CGATCGGGAGTTAGGGCAAG 60.249 60.0 7.38 0.00 0.00 4.01 F
4730 7028 0.249120 TGTCAACGGGCCTGACTATG 59.751 55.0 21.41 11.52 43.03 2.23 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1687 1707 0.107459 CTGCCTCTCTTACCCTTGGC 60.107 60.000 0.00 0.0 40.62 4.52 R
1871 2090 0.454600 CGCCGTTAAGCTACCTCAGA 59.545 55.000 0.00 0.0 0.00 3.27 R
1935 2161 3.526931 TGGCAGTGCTAGTCATTCTAC 57.473 47.619 16.11 0.0 0.00 2.59 R
3129 3455 0.036388 CACAGGTAGGATGTTGGCGT 60.036 55.000 0.00 0.0 0.00 5.68 R
4499 6782 1.133253 CATCGCACGCACTTTCCAG 59.867 57.895 0.00 0.0 0.00 3.86 R
4728 7026 0.106369 CTGGCCCCACATGACATCAT 60.106 55.000 0.00 0.0 36.96 2.45 R
5391 8378 0.818040 ACAGAACAAAGGGCGGTGTC 60.818 55.000 0.00 0.0 0.00 3.67 R
6570 10553 0.396811 AGAAGTTACGGCCTTGCAGT 59.603 50.000 0.00 0.0 40.45 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 9.773328 CATCGTTGAAGTATAACAAACAATCAT 57.227 29.630 0.00 0.00 0.00 2.45
87 88 3.838244 TTATAGCTTTGCCGGATCAGT 57.162 42.857 5.05 0.00 0.00 3.41
88 89 2.717639 ATAGCTTTGCCGGATCAGTT 57.282 45.000 5.05 0.00 0.00 3.16
89 90 2.024176 TAGCTTTGCCGGATCAGTTC 57.976 50.000 5.05 0.00 0.00 3.01
90 91 0.036732 AGCTTTGCCGGATCAGTTCA 59.963 50.000 5.05 0.00 0.00 3.18
91 92 0.449388 GCTTTGCCGGATCAGTTCAG 59.551 55.000 5.05 0.00 0.00 3.02
92 93 1.813513 CTTTGCCGGATCAGTTCAGT 58.186 50.000 5.05 0.00 0.00 3.41
93 94 1.734465 CTTTGCCGGATCAGTTCAGTC 59.266 52.381 5.05 0.00 0.00 3.51
94 95 0.684535 TTGCCGGATCAGTTCAGTCA 59.315 50.000 5.05 0.00 0.00 3.41
95 96 0.037326 TGCCGGATCAGTTCAGTCAC 60.037 55.000 5.05 0.00 0.00 3.67
96 97 0.037326 GCCGGATCAGTTCAGTCACA 60.037 55.000 5.05 0.00 0.00 3.58
97 98 1.714794 CCGGATCAGTTCAGTCACAC 58.285 55.000 0.00 0.00 0.00 3.82
98 99 1.673033 CCGGATCAGTTCAGTCACACC 60.673 57.143 0.00 0.00 0.00 4.16
99 100 1.000843 CGGATCAGTTCAGTCACACCA 59.999 52.381 0.00 0.00 0.00 4.17
100 101 2.354103 CGGATCAGTTCAGTCACACCAT 60.354 50.000 0.00 0.00 0.00 3.55
101 102 3.005554 GGATCAGTTCAGTCACACCATG 58.994 50.000 0.00 0.00 0.00 3.66
102 103 3.306989 GGATCAGTTCAGTCACACCATGA 60.307 47.826 0.00 0.00 33.79 3.07
103 104 4.511527 GATCAGTTCAGTCACACCATGAT 58.488 43.478 0.00 0.00 40.28 2.45
104 105 5.395657 GGATCAGTTCAGTCACACCATGATA 60.396 44.000 0.00 0.00 40.28 2.15
105 106 4.820897 TCAGTTCAGTCACACCATGATAC 58.179 43.478 0.00 0.00 40.28 2.24
106 107 4.283212 TCAGTTCAGTCACACCATGATACA 59.717 41.667 0.00 0.00 40.28 2.29
107 108 4.389992 CAGTTCAGTCACACCATGATACAC 59.610 45.833 0.00 0.00 40.28 2.90
108 109 4.040339 AGTTCAGTCACACCATGATACACA 59.960 41.667 0.00 0.00 40.28 3.72
109 110 4.615588 TCAGTCACACCATGATACACAA 57.384 40.909 0.00 0.00 40.28 3.33
110 111 5.164620 TCAGTCACACCATGATACACAAT 57.835 39.130 0.00 0.00 40.28 2.71
111 112 5.559770 TCAGTCACACCATGATACACAATT 58.440 37.500 0.00 0.00 40.28 2.32
112 113 5.412286 TCAGTCACACCATGATACACAATTG 59.588 40.000 3.24 3.24 40.28 2.32
113 114 5.412286 CAGTCACACCATGATACACAATTGA 59.588 40.000 13.59 0.00 40.28 2.57
114 115 6.094464 CAGTCACACCATGATACACAATTGAT 59.906 38.462 13.59 2.17 40.28 2.57
115 116 6.660521 AGTCACACCATGATACACAATTGATT 59.339 34.615 13.59 0.35 40.28 2.57
116 117 6.748658 GTCACACCATGATACACAATTGATTG 59.251 38.462 13.59 3.25 40.28 2.67
117 118 6.433716 TCACACCATGATACACAATTGATTGT 59.566 34.615 13.59 9.65 41.19 2.71
118 119 7.039853 TCACACCATGATACACAATTGATTGTT 60.040 33.333 13.59 0.00 39.68 2.83
130 131 5.180271 CAATTGATTGTTGATCTTTGGGGG 58.820 41.667 0.00 0.00 35.69 5.40
149 150 5.084818 GGGGGTTTCAAATATTTGACCAG 57.915 43.478 26.69 3.49 45.99 4.00
150 151 4.530553 GGGGGTTTCAAATATTTGACCAGT 59.469 41.667 26.69 0.00 45.99 4.00
151 152 5.717654 GGGGGTTTCAAATATTTGACCAGTA 59.282 40.000 26.69 12.00 45.99 2.74
152 153 6.350696 GGGGGTTTCAAATATTTGACCAGTAC 60.351 42.308 26.69 18.55 45.99 2.73
153 154 6.436218 GGGGTTTCAAATATTTGACCAGTACT 59.564 38.462 26.69 0.00 45.99 2.73
154 155 7.612633 GGGGTTTCAAATATTTGACCAGTACTA 59.387 37.037 26.69 10.02 45.99 1.82
155 156 9.185680 GGGTTTCAAATATTTGACCAGTACTAT 57.814 33.333 26.69 0.00 45.99 2.12
166 167 6.671614 TGACCAGTACTATTTTTATTGCCG 57.328 37.500 0.00 0.00 0.00 5.69
167 168 5.587043 TGACCAGTACTATTTTTATTGCCGG 59.413 40.000 0.00 0.00 0.00 6.13
168 169 5.503002 ACCAGTACTATTTTTATTGCCGGT 58.497 37.500 1.90 0.00 0.00 5.28
169 170 5.355910 ACCAGTACTATTTTTATTGCCGGTG 59.644 40.000 1.90 0.00 0.00 4.94
170 171 5.587043 CCAGTACTATTTTTATTGCCGGTGA 59.413 40.000 1.90 0.00 0.00 4.02
171 172 6.094325 CCAGTACTATTTTTATTGCCGGTGAA 59.906 38.462 1.90 0.00 0.00 3.18
172 173 7.186804 CAGTACTATTTTTATTGCCGGTGAAG 58.813 38.462 1.90 0.00 0.00 3.02
173 174 7.065324 CAGTACTATTTTTATTGCCGGTGAAGA 59.935 37.037 1.90 0.00 0.00 2.87
174 175 7.773690 AGTACTATTTTTATTGCCGGTGAAGAT 59.226 33.333 1.90 0.00 0.00 2.40
175 176 7.404671 ACTATTTTTATTGCCGGTGAAGATT 57.595 32.000 1.90 0.00 0.00 2.40
176 177 8.514330 ACTATTTTTATTGCCGGTGAAGATTA 57.486 30.769 1.90 0.00 0.00 1.75
177 178 8.962679 ACTATTTTTATTGCCGGTGAAGATTAA 58.037 29.630 1.90 0.00 0.00 1.40
178 179 9.796120 CTATTTTTATTGCCGGTGAAGATTAAA 57.204 29.630 1.90 0.00 0.00 1.52
180 181 9.665719 ATTTTTATTGCCGGTGAAGATTAAAAT 57.334 25.926 1.90 6.06 0.00 1.82
181 182 8.472683 TTTTATTGCCGGTGAAGATTAAAATG 57.527 30.769 1.90 0.00 0.00 2.32
182 183 5.659440 ATTGCCGGTGAAGATTAAAATGT 57.341 34.783 1.90 0.00 0.00 2.71
183 184 5.461032 TTGCCGGTGAAGATTAAAATGTT 57.539 34.783 1.90 0.00 0.00 2.71
184 185 5.461032 TGCCGGTGAAGATTAAAATGTTT 57.539 34.783 1.90 0.00 0.00 2.83
185 186 6.576662 TGCCGGTGAAGATTAAAATGTTTA 57.423 33.333 1.90 0.00 0.00 2.01
186 187 7.164230 TGCCGGTGAAGATTAAAATGTTTAT 57.836 32.000 1.90 0.00 0.00 1.40
187 188 7.607250 TGCCGGTGAAGATTAAAATGTTTATT 58.393 30.769 1.90 0.00 0.00 1.40
188 189 8.091449 TGCCGGTGAAGATTAAAATGTTTATTT 58.909 29.630 1.90 0.00 38.11 1.40
189 190 8.931775 GCCGGTGAAGATTAAAATGTTTATTTT 58.068 29.630 1.90 0.00 45.71 1.82
213 214 9.612066 TTTTTCAAGGAAAAGATTAGCATGTTT 57.388 25.926 4.55 0.00 41.55 2.83
214 215 8.816640 TTTCAAGGAAAAGATTAGCATGTTTC 57.183 30.769 0.00 0.00 0.00 2.78
215 216 7.765695 TCAAGGAAAAGATTAGCATGTTTCT 57.234 32.000 0.00 0.00 0.00 2.52
216 217 8.181904 TCAAGGAAAAGATTAGCATGTTTCTT 57.818 30.769 0.00 0.00 0.00 2.52
217 218 9.295825 TCAAGGAAAAGATTAGCATGTTTCTTA 57.704 29.630 0.00 0.00 0.00 2.10
218 219 9.346725 CAAGGAAAAGATTAGCATGTTTCTTAC 57.653 33.333 0.00 0.00 0.00 2.34
219 220 8.870075 AGGAAAAGATTAGCATGTTTCTTACT 57.130 30.769 0.00 0.00 0.00 2.24
220 221 8.951243 AGGAAAAGATTAGCATGTTTCTTACTC 58.049 33.333 0.00 0.00 0.00 2.59
221 222 7.905493 GGAAAAGATTAGCATGTTTCTTACTCG 59.095 37.037 0.00 0.00 0.00 4.18
222 223 7.907214 AAAGATTAGCATGTTTCTTACTCGT 57.093 32.000 0.00 0.00 0.00 4.18
223 224 7.527084 AAGATTAGCATGTTTCTTACTCGTC 57.473 36.000 0.00 0.00 0.00 4.20
224 225 6.043411 AGATTAGCATGTTTCTTACTCGTCC 58.957 40.000 0.00 0.00 0.00 4.79
225 226 3.963428 AGCATGTTTCTTACTCGTCCT 57.037 42.857 0.00 0.00 0.00 3.85
226 227 6.519679 TTAGCATGTTTCTTACTCGTCCTA 57.480 37.500 0.00 0.00 0.00 2.94
227 228 5.599999 AGCATGTTTCTTACTCGTCCTAT 57.400 39.130 0.00 0.00 0.00 2.57
228 229 5.352284 AGCATGTTTCTTACTCGTCCTATG 58.648 41.667 0.00 0.00 0.00 2.23
229 230 5.105310 AGCATGTTTCTTACTCGTCCTATGT 60.105 40.000 0.00 0.00 0.00 2.29
230 231 5.005779 GCATGTTTCTTACTCGTCCTATGTG 59.994 44.000 0.00 0.00 0.00 3.21
231 232 5.970317 TGTTTCTTACTCGTCCTATGTGA 57.030 39.130 0.00 0.00 0.00 3.58
232 233 6.525578 TGTTTCTTACTCGTCCTATGTGAT 57.474 37.500 0.00 0.00 0.00 3.06
233 234 6.330278 TGTTTCTTACTCGTCCTATGTGATG 58.670 40.000 0.00 0.00 0.00 3.07
234 235 6.071560 TGTTTCTTACTCGTCCTATGTGATGT 60.072 38.462 0.00 0.00 0.00 3.06
235 236 7.121611 TGTTTCTTACTCGTCCTATGTGATGTA 59.878 37.037 0.00 0.00 0.00 2.29
236 237 7.634671 TTCTTACTCGTCCTATGTGATGTAA 57.365 36.000 0.00 0.00 0.00 2.41
237 238 7.260558 TCTTACTCGTCCTATGTGATGTAAG 57.739 40.000 0.00 0.00 37.81 2.34
238 239 6.827251 TCTTACTCGTCCTATGTGATGTAAGT 59.173 38.462 0.00 0.00 37.74 2.24
239 240 5.916661 ACTCGTCCTATGTGATGTAAGTT 57.083 39.130 0.00 0.00 0.00 2.66
240 241 5.892568 ACTCGTCCTATGTGATGTAAGTTC 58.107 41.667 0.00 0.00 0.00 3.01
241 242 5.652891 ACTCGTCCTATGTGATGTAAGTTCT 59.347 40.000 0.00 0.00 0.00 3.01
242 243 6.153000 ACTCGTCCTATGTGATGTAAGTTCTT 59.847 38.462 0.00 0.00 0.00 2.52
243 244 6.931838 TCGTCCTATGTGATGTAAGTTCTTT 58.068 36.000 0.00 0.00 0.00 2.52
244 245 7.383687 TCGTCCTATGTGATGTAAGTTCTTTT 58.616 34.615 0.00 0.00 0.00 2.27
245 246 7.876068 TCGTCCTATGTGATGTAAGTTCTTTTT 59.124 33.333 0.00 0.00 0.00 1.94
272 273 7.793902 TCAAACTTAGAATTACTTCGACAAGC 58.206 34.615 0.00 0.00 36.45 4.01
273 274 7.656137 TCAAACTTAGAATTACTTCGACAAGCT 59.344 33.333 0.00 0.00 36.45 3.74
274 275 7.964604 AACTTAGAATTACTTCGACAAGCTT 57.035 32.000 0.00 0.00 36.45 3.74
275 276 9.485206 AAACTTAGAATTACTTCGACAAGCTTA 57.515 29.630 0.00 0.00 36.45 3.09
276 277 9.654663 AACTTAGAATTACTTCGACAAGCTTAT 57.345 29.630 0.00 0.00 36.45 1.73
277 278 9.088512 ACTTAGAATTACTTCGACAAGCTTATG 57.911 33.333 0.00 0.00 36.45 1.90
278 279 6.910536 AGAATTACTTCGACAAGCTTATGG 57.089 37.500 0.00 0.00 36.45 2.74
279 280 5.817816 AGAATTACTTCGACAAGCTTATGGG 59.182 40.000 0.00 0.00 36.45 4.00
280 281 2.403252 ACTTCGACAAGCTTATGGGG 57.597 50.000 0.00 0.00 32.09 4.96
281 282 1.906574 ACTTCGACAAGCTTATGGGGA 59.093 47.619 0.00 0.00 32.09 4.81
282 283 2.304761 ACTTCGACAAGCTTATGGGGAA 59.695 45.455 0.00 0.00 32.09 3.97
283 284 3.244770 ACTTCGACAAGCTTATGGGGAAA 60.245 43.478 0.00 0.00 32.09 3.13
284 285 3.644966 TCGACAAGCTTATGGGGAAAT 57.355 42.857 0.00 0.00 0.00 2.17
285 286 3.278574 TCGACAAGCTTATGGGGAAATG 58.721 45.455 0.00 0.00 0.00 2.32
286 287 3.054728 TCGACAAGCTTATGGGGAAATGA 60.055 43.478 0.00 0.00 0.00 2.57
287 288 3.313526 CGACAAGCTTATGGGGAAATGAG 59.686 47.826 0.00 0.00 0.00 2.90
288 289 3.026694 ACAAGCTTATGGGGAAATGAGC 58.973 45.455 0.00 0.00 38.97 4.26
290 291 3.677156 AGCTTATGGGGAAATGAGCTT 57.323 42.857 0.00 0.00 44.56 3.74
291 292 3.294214 AGCTTATGGGGAAATGAGCTTG 58.706 45.455 0.00 0.00 44.56 4.01
292 293 3.053395 AGCTTATGGGGAAATGAGCTTGA 60.053 43.478 0.00 0.00 44.56 3.02
293 294 3.067320 GCTTATGGGGAAATGAGCTTGAC 59.933 47.826 0.00 0.00 36.51 3.18
294 295 2.905415 ATGGGGAAATGAGCTTGACA 57.095 45.000 0.00 0.00 0.00 3.58
295 296 2.673775 TGGGGAAATGAGCTTGACAA 57.326 45.000 0.00 0.00 0.00 3.18
296 297 2.517959 TGGGGAAATGAGCTTGACAAG 58.482 47.619 11.02 11.02 0.00 3.16
297 298 2.108075 TGGGGAAATGAGCTTGACAAGA 59.892 45.455 19.51 0.00 0.00 3.02
298 299 3.245371 TGGGGAAATGAGCTTGACAAGAT 60.245 43.478 19.51 13.11 0.00 2.40
299 300 4.018506 TGGGGAAATGAGCTTGACAAGATA 60.019 41.667 19.51 4.31 0.00 1.98
300 301 5.136105 GGGGAAATGAGCTTGACAAGATAT 58.864 41.667 19.51 6.43 0.00 1.63
301 302 5.240403 GGGGAAATGAGCTTGACAAGATATC 59.760 44.000 19.51 12.73 0.00 1.63
302 303 6.060788 GGGAAATGAGCTTGACAAGATATCT 58.939 40.000 19.51 6.09 0.00 1.98
303 304 6.204495 GGGAAATGAGCTTGACAAGATATCTC 59.796 42.308 19.51 14.79 0.00 2.75
304 305 6.073873 GGAAATGAGCTTGACAAGATATCTCG 60.074 42.308 19.51 0.00 0.00 4.04
305 306 5.781210 ATGAGCTTGACAAGATATCTCGA 57.219 39.130 19.51 7.11 0.00 4.04
306 307 5.781210 TGAGCTTGACAAGATATCTCGAT 57.219 39.130 19.51 0.00 0.00 3.59
307 308 6.154203 TGAGCTTGACAAGATATCTCGATT 57.846 37.500 19.51 0.00 0.00 3.34
308 309 6.212235 TGAGCTTGACAAGATATCTCGATTC 58.788 40.000 19.51 1.27 0.00 2.52
309 310 6.154203 AGCTTGACAAGATATCTCGATTCA 57.846 37.500 19.51 3.84 0.00 2.57
310 311 6.757237 AGCTTGACAAGATATCTCGATTCAT 58.243 36.000 19.51 0.00 0.00 2.57
311 312 7.215789 AGCTTGACAAGATATCTCGATTCATT 58.784 34.615 19.51 0.00 0.00 2.57
312 313 7.171167 AGCTTGACAAGATATCTCGATTCATTG 59.829 37.037 19.51 0.44 0.00 2.82
313 314 7.570875 GCTTGACAAGATATCTCGATTCATTGG 60.571 40.741 19.51 2.59 0.00 3.16
314 315 6.226052 TGACAAGATATCTCGATTCATTGGG 58.774 40.000 5.51 0.00 0.00 4.12
315 316 6.179906 ACAAGATATCTCGATTCATTGGGT 57.820 37.500 5.51 0.00 0.00 4.51
316 317 6.595682 ACAAGATATCTCGATTCATTGGGTT 58.404 36.000 5.51 0.00 0.00 4.11
317 318 7.056635 ACAAGATATCTCGATTCATTGGGTTT 58.943 34.615 5.51 0.00 0.00 3.27
318 319 8.210946 ACAAGATATCTCGATTCATTGGGTTTA 58.789 33.333 5.51 0.00 0.00 2.01
319 320 9.224267 CAAGATATCTCGATTCATTGGGTTTAT 57.776 33.333 5.51 0.00 0.00 1.40
320 321 9.799106 AAGATATCTCGATTCATTGGGTTTATT 57.201 29.630 5.51 0.00 0.00 1.40
321 322 9.224267 AGATATCTCGATTCATTGGGTTTATTG 57.776 33.333 0.00 0.00 0.00 1.90
322 323 8.924511 ATATCTCGATTCATTGGGTTTATTGT 57.075 30.769 0.00 0.00 0.00 2.71
323 324 6.435430 TCTCGATTCATTGGGTTTATTGTG 57.565 37.500 0.00 0.00 0.00 3.33
707 708 3.891366 CACCAGTCACTCCAGGAAATTTT 59.109 43.478 0.00 0.00 0.00 1.82
708 709 5.070001 CACCAGTCACTCCAGGAAATTTTA 58.930 41.667 0.00 0.00 0.00 1.52
720 721 6.644592 TCCAGGAAATTTTAGACATTTTTGCG 59.355 34.615 0.00 0.00 0.00 4.85
886 887 9.396022 CTCTCCCACATGTTTGTAATATTAGTT 57.604 33.333 0.00 0.00 33.76 2.24
921 922 4.593597 GCACGTGCAAGCTTACTAATAA 57.406 40.909 34.52 0.00 41.59 1.40
922 923 5.156804 GCACGTGCAAGCTTACTAATAAT 57.843 39.130 34.52 0.00 41.59 1.28
923 924 6.281848 GCACGTGCAAGCTTACTAATAATA 57.718 37.500 34.52 0.00 41.59 0.98
924 925 6.355638 GCACGTGCAAGCTTACTAATAATAG 58.644 40.000 34.52 0.00 41.59 1.73
925 926 6.564125 GCACGTGCAAGCTTACTAATAATAGG 60.564 42.308 34.52 0.00 41.59 2.57
926 927 6.700081 CACGTGCAAGCTTACTAATAATAGGA 59.300 38.462 0.82 0.00 33.15 2.94
927 928 7.385205 CACGTGCAAGCTTACTAATAATAGGAT 59.615 37.037 0.82 0.00 33.15 3.24
928 929 7.931948 ACGTGCAAGCTTACTAATAATAGGATT 59.068 33.333 0.00 0.00 33.15 3.01
929 930 9.419297 CGTGCAAGCTTACTAATAATAGGATTA 57.581 33.333 0.00 0.00 33.15 1.75
947 948 6.393171 AGGATTAAAAGCATCAAGTTTCTGC 58.607 36.000 0.00 0.00 36.15 4.26
948 949 5.578336 GGATTAAAAGCATCAAGTTTCTGCC 59.422 40.000 3.38 0.00 36.56 4.85
949 950 3.391506 AAAAGCATCAAGTTTCTGCCC 57.608 42.857 3.38 0.00 36.56 5.36
950 951 1.999648 AAGCATCAAGTTTCTGCCCA 58.000 45.000 3.38 0.00 36.56 5.36
951 952 2.226962 AGCATCAAGTTTCTGCCCAT 57.773 45.000 3.38 0.00 36.56 4.00
952 953 2.532843 AGCATCAAGTTTCTGCCCATT 58.467 42.857 3.38 0.00 36.56 3.16
953 954 3.700538 AGCATCAAGTTTCTGCCCATTA 58.299 40.909 3.38 0.00 36.56 1.90
954 955 4.088634 AGCATCAAGTTTCTGCCCATTAA 58.911 39.130 3.38 0.00 36.56 1.40
955 956 4.527816 AGCATCAAGTTTCTGCCCATTAAA 59.472 37.500 3.38 0.00 36.56 1.52
956 957 5.011943 AGCATCAAGTTTCTGCCCATTAAAA 59.988 36.000 3.38 0.00 36.56 1.52
957 958 5.700373 GCATCAAGTTTCTGCCCATTAAAAA 59.300 36.000 0.00 0.00 0.00 1.94
958 959 6.128472 GCATCAAGTTTCTGCCCATTAAAAAG 60.128 38.462 0.00 0.00 0.00 2.27
959 960 6.723298 TCAAGTTTCTGCCCATTAAAAAGA 57.277 33.333 0.00 0.00 0.00 2.52
960 961 7.118496 TCAAGTTTCTGCCCATTAAAAAGAA 57.882 32.000 0.00 0.00 0.00 2.52
961 962 6.983890 TCAAGTTTCTGCCCATTAAAAAGAAC 59.016 34.615 0.00 0.00 0.00 3.01
962 963 6.731292 AGTTTCTGCCCATTAAAAAGAACT 57.269 33.333 0.00 0.00 0.00 3.01
963 964 6.515832 AGTTTCTGCCCATTAAAAAGAACTG 58.484 36.000 0.00 0.00 0.00 3.16
964 965 6.323739 AGTTTCTGCCCATTAAAAAGAACTGA 59.676 34.615 0.00 0.00 0.00 3.41
965 966 6.723298 TTCTGCCCATTAAAAAGAACTGAA 57.277 33.333 0.00 0.00 0.00 3.02
966 967 6.723298 TCTGCCCATTAAAAAGAACTGAAA 57.277 33.333 0.00 0.00 0.00 2.69
967 968 7.118496 TCTGCCCATTAAAAAGAACTGAAAA 57.882 32.000 0.00 0.00 0.00 2.29
968 969 7.209475 TCTGCCCATTAAAAAGAACTGAAAAG 58.791 34.615 0.00 0.00 0.00 2.27
969 970 6.287525 TGCCCATTAAAAAGAACTGAAAAGG 58.712 36.000 0.00 0.00 0.00 3.11
970 971 6.098982 TGCCCATTAAAAAGAACTGAAAAGGA 59.901 34.615 0.00 0.00 0.00 3.36
971 972 6.989759 GCCCATTAAAAAGAACTGAAAAGGAA 59.010 34.615 0.00 0.00 0.00 3.36
972 973 7.497579 GCCCATTAAAAAGAACTGAAAAGGAAA 59.502 33.333 0.00 0.00 0.00 3.13
1013 1016 1.127951 CGTTCGTGTGGGCTTTATGTC 59.872 52.381 0.00 0.00 0.00 3.06
1016 1019 0.719465 CGTGTGGGCTTTATGTCGAC 59.281 55.000 9.11 9.11 0.00 4.20
1017 1020 0.719465 GTGTGGGCTTTATGTCGACG 59.281 55.000 11.62 0.00 31.40 5.12
1431 1434 1.482593 CCACCTCGTATGCTTCTTCCT 59.517 52.381 0.00 0.00 0.00 3.36
1434 1437 2.694109 ACCTCGTATGCTTCTTCCTACC 59.306 50.000 0.00 0.00 0.00 3.18
1438 1441 3.884091 TCGTATGCTTCTTCCTACCTCTC 59.116 47.826 0.00 0.00 0.00 3.20
1439 1442 3.886505 CGTATGCTTCTTCCTACCTCTCT 59.113 47.826 0.00 0.00 0.00 3.10
1514 1534 3.119137 TGTCGGTGAGTGATAATGGACTG 60.119 47.826 0.00 0.00 0.00 3.51
1517 1537 3.118775 CGGTGAGTGATAATGGACTGGAA 60.119 47.826 0.00 0.00 0.00 3.53
1592 1612 2.876550 ACTTTGTTTCGGTAGGAGCAAC 59.123 45.455 0.00 0.00 0.00 4.17
1595 1615 0.675837 GTTTCGGTAGGAGCAACCCC 60.676 60.000 0.00 0.00 40.05 4.95
1613 1633 3.290710 CCCCCACTATGACCAATTTGAG 58.709 50.000 0.00 0.00 0.00 3.02
1629 1649 8.352942 ACCAATTTGAGTAGTTGACAGAAATTC 58.647 33.333 0.00 0.00 32.70 2.17
1639 1659 9.132521 GTAGTTGACAGAAATTCCATGATTTTG 57.867 33.333 0.00 0.00 29.75 2.44
1643 1663 4.933400 ACAGAAATTCCATGATTTTGCTGC 59.067 37.500 0.00 0.00 29.75 5.25
1649 1669 2.492881 TCCATGATTTTGCTGCACGAAT 59.507 40.909 0.00 5.96 0.00 3.34
1670 1690 1.207791 AACAGGAGATAGTGGGGCAG 58.792 55.000 0.00 0.00 0.00 4.85
1703 1883 0.833949 GGAGCCAAGGGTAAGAGAGG 59.166 60.000 0.00 0.00 0.00 3.69
1736 1916 2.510768 ACCTCTGTTCGTGACTGAAC 57.489 50.000 11.46 11.46 46.63 3.18
1745 1960 4.668289 GTTCGTGACTGAACAAAAATGGT 58.332 39.130 12.85 0.00 45.92 3.55
1783 1998 9.716531 ATTTGATCTTCCTTTCAAGATTTTTCC 57.283 29.630 0.00 0.00 42.20 3.13
1816 2035 5.437289 CTGTGAGCCAGAAAATGTAAACA 57.563 39.130 0.00 0.00 44.49 2.83
1836 2055 2.014128 ACCAGGGTTATTCGAAATGCG 58.986 47.619 0.00 0.00 42.69 4.73
1871 2090 3.003275 CCAACAAAAGTCAGTGTACGCAT 59.997 43.478 9.48 0.00 0.00 4.73
1913 2139 5.627367 CGAAATCTGAAGAGATGATACGGAC 59.373 44.000 0.00 0.00 39.04 4.79
1922 2148 5.420409 AGAGATGATACGGACAAACCTTTC 58.580 41.667 0.00 0.00 36.31 2.62
1935 2161 4.036380 ACAAACCTTTCAAAACTCTAGCCG 59.964 41.667 0.00 0.00 0.00 5.52
1973 2199 0.835941 CATACTGCTCCCCTGCTTCT 59.164 55.000 0.00 0.00 0.00 2.85
1979 2205 1.076024 TGCTCCCCTGCTTCTGAAATT 59.924 47.619 0.00 0.00 0.00 1.82
1994 2220 9.070149 GCTTCTGAAATTGTGTATTTTCATCTC 57.930 33.333 0.00 0.00 36.59 2.75
2096 2322 7.092444 ACCTAGATAACTGGAATTGTTGATGGA 60.092 37.037 0.00 0.00 0.00 3.41
2122 2348 5.185454 CCATGTTTAGCACTTCACATCCTA 58.815 41.667 0.00 0.00 0.00 2.94
2123 2349 5.295292 CCATGTTTAGCACTTCACATCCTAG 59.705 44.000 0.00 0.00 0.00 3.02
2220 2448 5.192522 AGGTCAGGGATGTTCATTTCATAGT 59.807 40.000 0.00 0.00 0.00 2.12
2278 2506 2.574824 AGCCCGTCTGGTATAAAGGTTT 59.425 45.455 0.00 0.00 36.04 3.27
2336 2564 7.660617 TCTTCCATTCTTAGAATCATCATGCTC 59.339 37.037 4.24 0.00 0.00 4.26
2367 2608 4.706962 GGCTGGTTAGATCCTGTGAAAATT 59.293 41.667 0.00 0.00 0.00 1.82
2393 2634 4.351111 AGGTCTTTTCTGGATAACCACACT 59.649 41.667 0.00 0.00 41.77 3.55
2522 2764 5.934625 AGTGTGACCTTAAATGTAGAAGCAG 59.065 40.000 0.00 0.00 0.00 4.24
2559 2801 0.607489 ATGCAGACCTGTTCCACAGC 60.607 55.000 0.00 0.00 44.63 4.40
2578 2820 2.682856 AGCCCACACTACGCATATTTTG 59.317 45.455 0.00 0.00 0.00 2.44
2593 2835 8.124823 ACGCATATTTTGAACTATGATTGTCAG 58.875 33.333 5.56 0.00 0.00 3.51
2598 2840 7.750229 TTTTGAACTATGATTGTCAGCTTCT 57.250 32.000 0.00 0.00 0.00 2.85
2680 2922 9.699410 AGGATATACATTCACTGAATTTTCCAA 57.301 29.630 1.17 0.00 28.87 3.53
2726 2968 3.561960 CCATCCAAGGACTGGTGATCAAA 60.562 47.826 0.00 0.00 46.51 2.69
2816 3058 2.436417 GCAGCCCAATCAAGTAAGTCA 58.564 47.619 0.00 0.00 0.00 3.41
2837 3079 9.807649 AAGTCATGCCTATCAATTGAAAATTAC 57.192 29.630 13.09 4.17 0.00 1.89
2994 3237 1.880027 CAGTGGGTTAAACTGGACAGC 59.120 52.381 0.00 0.00 41.13 4.40
3119 3445 1.606668 CTCATGCCTAGTCCTCTCGAC 59.393 57.143 0.00 0.00 42.32 4.20
3122 3448 1.210538 TGCCTAGTCCTCTCGACCTA 58.789 55.000 0.00 0.00 43.08 3.08
3129 3455 2.575279 AGTCCTCTCGACCTACCTAACA 59.425 50.000 0.00 0.00 43.08 2.41
3130 3456 2.682352 GTCCTCTCGACCTACCTAACAC 59.318 54.545 0.00 0.00 35.23 3.32
3243 3569 3.632643 TTACCTCCGTCCCAAATTACC 57.367 47.619 0.00 0.00 0.00 2.85
3250 3576 3.073356 TCCGTCCCAAATTACCTGTCTTT 59.927 43.478 0.00 0.00 0.00 2.52
3293 3619 5.918576 TGTATCTAACACTGAAACGTGTCTG 59.081 40.000 10.80 10.80 46.71 3.51
3301 3627 6.078328 ACACTGAAACGTGTCTGGATACATC 61.078 44.000 16.06 0.00 44.32 3.06
3302 3628 8.944113 ACACTGAAACGTGTCTGGATACATCC 62.944 46.154 16.06 0.98 44.32 3.51
3364 3690 7.013369 GGAGGGAGTATTAGTTTATTTGCTTGG 59.987 40.741 0.00 0.00 0.00 3.61
3448 3779 6.734137 ACAATACACAAGTTACACAACCATG 58.266 36.000 0.00 0.00 35.05 3.66
3450 3781 6.952773 ATACACAAGTTACACAACCATGTT 57.047 33.333 0.00 0.00 37.82 2.71
3471 3802 4.551702 TCAAGCTTAGTGGCTACATTGA 57.448 40.909 2.02 2.25 42.24 2.57
3553 3884 7.824289 TGACCTTTTCAATAAACATCTCGATCT 59.176 33.333 0.00 0.00 0.00 2.75
3651 3982 6.588204 ACCAATCACTAGTGTTCTGTACAAA 58.412 36.000 21.99 0.00 38.80 2.83
3711 4042 5.509832 TCTGTGTGAGTACTAGGGAACTA 57.490 43.478 0.00 0.00 43.67 2.24
3771 4102 3.325135 CGAGAATCAAAGTAGGGCCCTAT 59.675 47.826 34.16 17.30 33.17 2.57
3966 4334 8.575649 AAAAGGTACCCATGTAGTATTTCTTG 57.424 34.615 8.74 0.00 0.00 3.02
3967 4335 7.504926 AAGGTACCCATGTAGTATTTCTTGA 57.495 36.000 8.74 0.00 0.00 3.02
3971 4339 8.621286 GGTACCCATGTAGTATTTCTTGAAATG 58.379 37.037 16.22 2.35 0.00 2.32
4133 4531 7.658982 TGAATCATAGTTCCTTCTATGCATGAC 59.341 37.037 10.16 0.00 43.84 3.06
4219 4617 8.970020 TCTCACCTTGCATAAAACATATTTCAT 58.030 29.630 0.00 0.00 0.00 2.57
4312 4710 1.249407 AAAAGGATTTACGCCGGCAA 58.751 45.000 28.98 14.33 37.28 4.52
4501 6784 3.869065 TCGCTAAACCAGGGATAAACTG 58.131 45.455 0.00 0.00 41.03 3.16
4537 6823 0.249489 CGATCGGGAGTTAGGGCAAG 60.249 60.000 7.38 0.00 0.00 4.01
4580 6870 1.133363 CGTGCGTGCATGTATTTGGC 61.133 55.000 7.93 0.00 0.00 4.52
4625 6915 2.321719 TGGTTTACTGGGCCCTTTTTC 58.678 47.619 25.70 9.03 0.00 2.29
4626 6916 2.090999 TGGTTTACTGGGCCCTTTTTCT 60.091 45.455 25.70 0.82 0.00 2.52
4627 6917 2.561419 GGTTTACTGGGCCCTTTTTCTC 59.439 50.000 25.70 8.00 0.00 2.87
4628 6918 3.227614 GTTTACTGGGCCCTTTTTCTCA 58.772 45.455 25.70 0.00 0.00 3.27
4629 6919 3.825908 TTACTGGGCCCTTTTTCTCAT 57.174 42.857 25.70 0.00 0.00 2.90
4630 6920 4.938575 TTACTGGGCCCTTTTTCTCATA 57.061 40.909 25.70 0.00 0.00 2.15
4631 6921 5.466127 TTACTGGGCCCTTTTTCTCATAT 57.534 39.130 25.70 0.00 0.00 1.78
4727 7025 1.071471 CTTGTCAACGGGCCTGACT 59.929 57.895 21.41 1.02 43.03 3.41
4728 7026 0.320374 CTTGTCAACGGGCCTGACTA 59.680 55.000 21.41 12.80 43.03 2.59
4729 7027 0.981183 TTGTCAACGGGCCTGACTAT 59.019 50.000 21.41 0.00 43.03 2.12
4730 7028 0.249120 TGTCAACGGGCCTGACTATG 59.751 55.000 21.41 11.52 43.03 2.23
4731 7029 0.535335 GTCAACGGGCCTGACTATGA 59.465 55.000 21.41 13.70 40.10 2.15
4732 7030 1.139058 GTCAACGGGCCTGACTATGAT 59.861 52.381 21.41 0.00 40.10 2.45
4733 7031 1.138859 TCAACGGGCCTGACTATGATG 59.861 52.381 21.41 5.43 0.00 3.07
4734 7032 1.134401 CAACGGGCCTGACTATGATGT 60.134 52.381 21.41 0.00 0.00 3.06
4735 7033 0.753262 ACGGGCCTGACTATGATGTC 59.247 55.000 21.41 0.00 37.47 3.06
4736 7034 0.752658 CGGGCCTGACTATGATGTCA 59.247 55.000 5.28 0.00 43.72 3.58
4764 7062 3.199880 CCAGACTTATAGGCACAAGGG 57.800 52.381 0.00 0.00 0.00 3.95
4787 7085 1.448013 GCGCCACCCTAGTTCTGTC 60.448 63.158 0.00 0.00 0.00 3.51
4809 7107 8.388656 TGTCCCAGTTTAATTATAGAGTCCTT 57.611 34.615 0.00 0.00 0.00 3.36
4810 7108 8.483758 TGTCCCAGTTTAATTATAGAGTCCTTC 58.516 37.037 0.00 0.00 0.00 3.46
4811 7109 8.706521 GTCCCAGTTTAATTATAGAGTCCTTCT 58.293 37.037 0.00 0.00 40.06 2.85
4941 7278 4.473477 CTACTTATAGCCACCCCTATGC 57.527 50.000 0.00 0.00 30.94 3.14
4946 7283 0.471022 TAGCCACCCCTATGCGATCA 60.471 55.000 0.00 0.00 0.00 2.92
4948 7285 0.250901 GCCACCCCTATGCGATCAAT 60.251 55.000 0.00 0.00 0.00 2.57
4949 7286 1.527034 CCACCCCTATGCGATCAATG 58.473 55.000 0.00 0.00 0.00 2.82
4951 7288 2.420642 CACCCCTATGCGATCAATGAG 58.579 52.381 0.00 0.00 0.00 2.90
4952 7289 2.050144 ACCCCTATGCGATCAATGAGT 58.950 47.619 0.00 0.00 0.00 3.41
4983 7320 9.270640 CCAGAAAATAATCTATCTTCTCACCTG 57.729 37.037 0.00 0.00 0.00 4.00
5111 7448 3.256960 AACCCCAGCCCGTGACAT 61.257 61.111 0.00 0.00 0.00 3.06
5112 7449 1.921346 AACCCCAGCCCGTGACATA 60.921 57.895 0.00 0.00 0.00 2.29
5166 7532 4.540359 TGAATTGGCAAGAAATTCCTGG 57.460 40.909 5.96 0.00 41.37 4.45
5228 8210 2.442236 TCCAAAGGATGAGCCATTCC 57.558 50.000 0.00 0.00 40.02 3.01
5337 8322 9.898152 GGCTATAGCAGATCCTATTTTTCTTAT 57.102 33.333 25.53 0.00 44.36 1.73
5370 8357 8.997621 AACGCTTTAAGATGAATAAGTGTCTA 57.002 30.769 0.00 0.00 39.61 2.59
5391 8378 8.409371 TGTCTAAACTATCTATCAGTCAAGCAG 58.591 37.037 0.00 0.00 0.00 4.24
5457 9316 5.010112 TCCTGTGTTGTGTTTCAGTTTTCAA 59.990 36.000 0.00 0.00 0.00 2.69
5460 9319 5.570973 TGTGTTGTGTTTCAGTTTTCAATCG 59.429 36.000 0.00 0.00 0.00 3.34
5687 9553 9.345517 CTGTGTTATTTGGTTTGATAATCACTG 57.654 33.333 0.00 0.00 0.00 3.66
5699 9565 9.515020 GTTTGATAATCACTGTTTGTTGAGAAA 57.485 29.630 0.00 0.00 0.00 2.52
5765 9631 5.013079 TGGTCCTGTTGAATCTCACTGTATT 59.987 40.000 0.00 0.00 0.00 1.89
5824 9694 5.260424 TGTGTACCCACTGCAATTTGATAT 58.740 37.500 0.00 0.00 42.34 1.63
5981 9852 9.607988 TTCTTCAGTGGCTTATTTATCGAATAA 57.392 29.630 0.00 0.00 37.76 1.40
6057 10025 2.146342 AGAAACACATCGCCACAGAAG 58.854 47.619 0.00 0.00 0.00 2.85
6222 10190 1.741770 GCGGAGTTGCTTCGGATGT 60.742 57.895 0.00 0.00 32.35 3.06
6343 10323 1.816224 TGTAATTCCCTCGGCTTTTGC 59.184 47.619 0.00 0.00 46.64 3.68
6417 10398 3.130340 GCAGTTGGTTTGTTCCAAGAGAA 59.870 43.478 0.00 0.00 46.35 2.87
6420 10401 4.770010 AGTTGGTTTGTTCCAAGAGAAACA 59.230 37.500 0.00 0.00 46.35 2.83
6421 10402 4.981806 TGGTTTGTTCCAAGAGAAACAG 57.018 40.909 0.00 0.00 35.85 3.16
6456 10439 1.506262 CGCCAACAGGTACAATGCC 59.494 57.895 0.00 0.00 0.00 4.40
6457 10440 1.240641 CGCCAACAGGTACAATGCCA 61.241 55.000 0.00 0.00 0.00 4.92
6496 10479 5.241064 TGAATCTATCCGCTAACAGGTACTC 59.759 44.000 0.00 0.00 34.60 2.59
6502 10485 1.332997 CGCTAACAGGTACTCCCTACG 59.667 57.143 0.00 0.00 43.86 3.51
6550 10533 1.827344 CTGCTCCATCACCAGTGTCTA 59.173 52.381 0.00 0.00 0.00 2.59
6570 10553 5.531659 GTCTAGTGCTATCTTGCCTAGTGTA 59.468 44.000 0.00 0.00 36.33 2.90
6898 13490 2.124983 CATCCACAGGGCGGACTG 60.125 66.667 0.00 0.00 44.03 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 3.253188 GGCTTTAGAAGATGTTGTGTGCA 59.747 43.478 0.00 0.00 0.00 4.57
87 88 4.615588 TGTGTATCATGGTGTGACTGAA 57.384 40.909 0.00 0.00 40.28 3.02
88 89 4.615588 TTGTGTATCATGGTGTGACTGA 57.384 40.909 0.00 0.00 40.28 3.41
89 90 5.412286 TCAATTGTGTATCATGGTGTGACTG 59.588 40.000 5.13 0.00 40.28 3.51
90 91 5.559770 TCAATTGTGTATCATGGTGTGACT 58.440 37.500 5.13 0.00 40.28 3.41
91 92 5.878332 TCAATTGTGTATCATGGTGTGAC 57.122 39.130 5.13 0.00 40.28 3.67
92 93 6.854778 CAATCAATTGTGTATCATGGTGTGA 58.145 36.000 5.13 0.00 35.75 3.58
107 108 5.180271 CCCCCAAAGATCAACAATCAATTG 58.820 41.667 0.00 0.00 43.26 2.32
108 109 5.425196 CCCCCAAAGATCAACAATCAATT 57.575 39.130 0.00 0.00 36.79 2.32
140 141 8.188139 CGGCAATAAAAATAGTACTGGTCAAAT 58.812 33.333 5.39 0.00 0.00 2.32
141 142 7.362229 CCGGCAATAAAAATAGTACTGGTCAAA 60.362 37.037 5.39 0.00 0.00 2.69
142 143 6.094325 CCGGCAATAAAAATAGTACTGGTCAA 59.906 38.462 5.39 0.00 0.00 3.18
143 144 5.587043 CCGGCAATAAAAATAGTACTGGTCA 59.413 40.000 5.39 0.00 0.00 4.02
144 145 5.587443 ACCGGCAATAAAAATAGTACTGGTC 59.413 40.000 5.39 0.00 29.57 4.02
145 146 5.355910 CACCGGCAATAAAAATAGTACTGGT 59.644 40.000 5.39 0.00 35.96 4.00
146 147 5.587043 TCACCGGCAATAAAAATAGTACTGG 59.413 40.000 5.39 0.00 0.00 4.00
147 148 6.671614 TCACCGGCAATAAAAATAGTACTG 57.328 37.500 5.39 0.00 0.00 2.74
148 149 7.107542 TCTTCACCGGCAATAAAAATAGTACT 58.892 34.615 0.00 0.00 0.00 2.73
149 150 7.311364 TCTTCACCGGCAATAAAAATAGTAC 57.689 36.000 0.00 0.00 0.00 2.73
150 151 8.514330 AATCTTCACCGGCAATAAAAATAGTA 57.486 30.769 0.00 0.00 0.00 1.82
151 152 7.404671 AATCTTCACCGGCAATAAAAATAGT 57.595 32.000 0.00 0.00 0.00 2.12
152 153 9.796120 TTTAATCTTCACCGGCAATAAAAATAG 57.204 29.630 0.00 0.00 0.00 1.73
154 155 9.665719 ATTTTAATCTTCACCGGCAATAAAAAT 57.334 25.926 0.00 1.61 0.00 1.82
155 156 8.930760 CATTTTAATCTTCACCGGCAATAAAAA 58.069 29.630 0.00 0.00 0.00 1.94
156 157 8.091449 ACATTTTAATCTTCACCGGCAATAAAA 58.909 29.630 0.00 4.04 0.00 1.52
157 158 7.607250 ACATTTTAATCTTCACCGGCAATAAA 58.393 30.769 0.00 0.00 0.00 1.40
158 159 7.164230 ACATTTTAATCTTCACCGGCAATAA 57.836 32.000 0.00 0.00 0.00 1.40
159 160 6.767524 ACATTTTAATCTTCACCGGCAATA 57.232 33.333 0.00 0.00 0.00 1.90
160 161 5.659440 ACATTTTAATCTTCACCGGCAAT 57.341 34.783 0.00 0.00 0.00 3.56
161 162 5.461032 AACATTTTAATCTTCACCGGCAA 57.539 34.783 0.00 0.00 0.00 4.52
162 163 5.461032 AAACATTTTAATCTTCACCGGCA 57.539 34.783 0.00 0.00 0.00 5.69
163 164 8.474006 AAATAAACATTTTAATCTTCACCGGC 57.526 30.769 0.00 0.00 0.00 6.13
187 188 9.612066 AAACATGCTAATCTTTTCCTTGAAAAA 57.388 25.926 0.00 0.00 40.34 1.94
188 189 9.260002 GAAACATGCTAATCTTTTCCTTGAAAA 57.740 29.630 0.00 2.39 38.90 2.29
189 190 8.641541 AGAAACATGCTAATCTTTTCCTTGAAA 58.358 29.630 0.00 0.00 0.00 2.69
190 191 8.181904 AGAAACATGCTAATCTTTTCCTTGAA 57.818 30.769 0.00 0.00 0.00 2.69
191 192 7.765695 AGAAACATGCTAATCTTTTCCTTGA 57.234 32.000 0.00 0.00 0.00 3.02
192 193 9.346725 GTAAGAAACATGCTAATCTTTTCCTTG 57.653 33.333 7.81 0.00 34.24 3.61
193 194 9.301897 AGTAAGAAACATGCTAATCTTTTCCTT 57.698 29.630 7.81 0.00 34.24 3.36
194 195 8.870075 AGTAAGAAACATGCTAATCTTTTCCT 57.130 30.769 7.81 0.00 34.24 3.36
195 196 7.905493 CGAGTAAGAAACATGCTAATCTTTTCC 59.095 37.037 7.81 0.32 34.24 3.13
196 197 8.443937 ACGAGTAAGAAACATGCTAATCTTTTC 58.556 33.333 7.81 2.45 34.24 2.29
197 198 8.324163 ACGAGTAAGAAACATGCTAATCTTTT 57.676 30.769 7.81 0.00 34.24 2.27
198 199 7.064728 GGACGAGTAAGAAACATGCTAATCTTT 59.935 37.037 7.81 0.00 34.24 2.52
199 200 6.535508 GGACGAGTAAGAAACATGCTAATCTT 59.464 38.462 0.00 0.45 36.24 2.40
200 201 6.043411 GGACGAGTAAGAAACATGCTAATCT 58.957 40.000 0.00 0.00 0.00 2.40
201 202 6.043411 AGGACGAGTAAGAAACATGCTAATC 58.957 40.000 0.00 0.00 0.00 1.75
202 203 5.978814 AGGACGAGTAAGAAACATGCTAAT 58.021 37.500 0.00 0.00 0.00 1.73
203 204 5.401531 AGGACGAGTAAGAAACATGCTAA 57.598 39.130 0.00 0.00 0.00 3.09
204 205 6.096423 ACATAGGACGAGTAAGAAACATGCTA 59.904 38.462 0.00 0.00 0.00 3.49
205 206 3.963428 AGGACGAGTAAGAAACATGCT 57.037 42.857 0.00 0.00 0.00 3.79
206 207 5.005779 CACATAGGACGAGTAAGAAACATGC 59.994 44.000 0.00 0.00 0.00 4.06
207 208 6.330278 TCACATAGGACGAGTAAGAAACATG 58.670 40.000 0.00 0.00 0.00 3.21
208 209 6.525578 TCACATAGGACGAGTAAGAAACAT 57.474 37.500 0.00 0.00 0.00 2.71
209 210 5.970317 TCACATAGGACGAGTAAGAAACA 57.030 39.130 0.00 0.00 0.00 2.83
210 211 6.331061 ACATCACATAGGACGAGTAAGAAAC 58.669 40.000 0.00 0.00 0.00 2.78
211 212 6.525578 ACATCACATAGGACGAGTAAGAAA 57.474 37.500 0.00 0.00 0.00 2.52
212 213 7.338703 ACTTACATCACATAGGACGAGTAAGAA 59.661 37.037 13.86 0.00 39.45 2.52
213 214 6.827251 ACTTACATCACATAGGACGAGTAAGA 59.173 38.462 13.86 0.00 39.45 2.10
214 215 7.028926 ACTTACATCACATAGGACGAGTAAG 57.971 40.000 0.00 0.00 41.56 2.34
215 216 7.338703 AGAACTTACATCACATAGGACGAGTAA 59.661 37.037 0.00 0.00 0.00 2.24
216 217 6.827251 AGAACTTACATCACATAGGACGAGTA 59.173 38.462 0.00 0.00 0.00 2.59
217 218 5.652891 AGAACTTACATCACATAGGACGAGT 59.347 40.000 0.00 0.00 0.00 4.18
218 219 6.137794 AGAACTTACATCACATAGGACGAG 57.862 41.667 0.00 0.00 0.00 4.18
219 220 6.525578 AAGAACTTACATCACATAGGACGA 57.474 37.500 0.00 0.00 0.00 4.20
220 221 7.596749 AAAAGAACTTACATCACATAGGACG 57.403 36.000 0.00 0.00 0.00 4.79
246 247 8.280497 GCTTGTCGAAGTAATTCTAAGTTTGAA 58.720 33.333 2.21 2.21 0.00 2.69
247 248 7.656137 AGCTTGTCGAAGTAATTCTAAGTTTGA 59.344 33.333 0.96 0.00 0.00 2.69
248 249 7.797819 AGCTTGTCGAAGTAATTCTAAGTTTG 58.202 34.615 0.96 0.00 0.00 2.93
249 250 7.964604 AGCTTGTCGAAGTAATTCTAAGTTT 57.035 32.000 0.96 0.00 0.00 2.66
250 251 7.964604 AAGCTTGTCGAAGTAATTCTAAGTT 57.035 32.000 0.00 0.00 0.00 2.66
251 252 9.088512 CATAAGCTTGTCGAAGTAATTCTAAGT 57.911 33.333 9.86 0.00 0.00 2.24
252 253 8.543774 CCATAAGCTTGTCGAAGTAATTCTAAG 58.456 37.037 9.86 4.63 0.00 2.18
253 254 7.494625 CCCATAAGCTTGTCGAAGTAATTCTAA 59.505 37.037 9.86 0.00 0.00 2.10
254 255 6.984474 CCCATAAGCTTGTCGAAGTAATTCTA 59.016 38.462 9.86 0.00 0.00 2.10
255 256 5.817816 CCCATAAGCTTGTCGAAGTAATTCT 59.182 40.000 9.86 0.00 0.00 2.40
256 257 5.007724 CCCCATAAGCTTGTCGAAGTAATTC 59.992 44.000 9.86 0.00 0.00 2.17
257 258 4.881850 CCCCATAAGCTTGTCGAAGTAATT 59.118 41.667 9.86 0.00 0.00 1.40
258 259 4.163458 TCCCCATAAGCTTGTCGAAGTAAT 59.837 41.667 9.86 0.00 0.00 1.89
259 260 3.516300 TCCCCATAAGCTTGTCGAAGTAA 59.484 43.478 9.86 0.00 0.00 2.24
260 261 3.101437 TCCCCATAAGCTTGTCGAAGTA 58.899 45.455 9.86 0.00 0.00 2.24
261 262 1.906574 TCCCCATAAGCTTGTCGAAGT 59.093 47.619 9.86 0.00 0.00 3.01
262 263 2.691409 TCCCCATAAGCTTGTCGAAG 57.309 50.000 9.86 0.00 0.00 3.79
263 264 3.426787 TTTCCCCATAAGCTTGTCGAA 57.573 42.857 9.86 1.16 0.00 3.71
264 265 3.054728 TCATTTCCCCATAAGCTTGTCGA 60.055 43.478 9.86 0.00 0.00 4.20
265 266 3.278574 TCATTTCCCCATAAGCTTGTCG 58.721 45.455 9.86 0.00 0.00 4.35
266 267 3.067320 GCTCATTTCCCCATAAGCTTGTC 59.933 47.826 9.86 0.00 0.00 3.18
267 268 3.026694 GCTCATTTCCCCATAAGCTTGT 58.973 45.455 9.86 0.00 0.00 3.16
268 269 3.294214 AGCTCATTTCCCCATAAGCTTG 58.706 45.455 9.86 0.00 36.75 4.01
269 270 3.677156 AGCTCATTTCCCCATAAGCTT 57.323 42.857 3.48 3.48 36.75 3.74
270 271 3.053395 TCAAGCTCATTTCCCCATAAGCT 60.053 43.478 0.00 0.00 41.60 3.74
271 272 3.067320 GTCAAGCTCATTTCCCCATAAGC 59.933 47.826 0.00 0.00 0.00 3.09
272 273 4.272489 TGTCAAGCTCATTTCCCCATAAG 58.728 43.478 0.00 0.00 0.00 1.73
273 274 4.314522 TGTCAAGCTCATTTCCCCATAA 57.685 40.909 0.00 0.00 0.00 1.90
274 275 4.018506 TCTTGTCAAGCTCATTTCCCCATA 60.019 41.667 7.78 0.00 0.00 2.74
275 276 2.905415 TGTCAAGCTCATTTCCCCAT 57.095 45.000 0.00 0.00 0.00 4.00
276 277 2.108075 TCTTGTCAAGCTCATTTCCCCA 59.892 45.455 7.78 0.00 0.00 4.96
277 278 2.795329 TCTTGTCAAGCTCATTTCCCC 58.205 47.619 7.78 0.00 0.00 4.81
278 279 6.060788 AGATATCTTGTCAAGCTCATTTCCC 58.939 40.000 7.78 0.00 0.00 3.97
279 280 6.073873 CGAGATATCTTGTCAAGCTCATTTCC 60.074 42.308 6.70 0.00 0.00 3.13
280 281 6.699204 TCGAGATATCTTGTCAAGCTCATTTC 59.301 38.462 17.85 4.99 0.00 2.17
281 282 6.577103 TCGAGATATCTTGTCAAGCTCATTT 58.423 36.000 17.85 0.00 0.00 2.32
282 283 6.154203 TCGAGATATCTTGTCAAGCTCATT 57.846 37.500 17.85 0.00 0.00 2.57
283 284 5.781210 TCGAGATATCTTGTCAAGCTCAT 57.219 39.130 17.85 0.00 0.00 2.90
284 285 5.781210 ATCGAGATATCTTGTCAAGCTCA 57.219 39.130 17.85 0.00 0.00 4.26
285 286 6.212235 TGAATCGAGATATCTTGTCAAGCTC 58.788 40.000 17.85 7.62 0.00 4.09
286 287 6.154203 TGAATCGAGATATCTTGTCAAGCT 57.846 37.500 17.85 0.61 0.00 3.74
287 288 7.289395 CAATGAATCGAGATATCTTGTCAAGC 58.711 38.462 17.85 6.89 0.00 4.01
288 289 7.095313 CCCAATGAATCGAGATATCTTGTCAAG 60.095 40.741 17.85 6.21 0.00 3.02
289 290 6.707608 CCCAATGAATCGAGATATCTTGTCAA 59.292 38.462 17.85 1.57 0.00 3.18
290 291 6.183361 ACCCAATGAATCGAGATATCTTGTCA 60.183 38.462 17.85 15.29 0.00 3.58
291 292 6.226787 ACCCAATGAATCGAGATATCTTGTC 58.773 40.000 17.85 10.73 0.00 3.18
292 293 6.179906 ACCCAATGAATCGAGATATCTTGT 57.820 37.500 17.85 1.67 0.00 3.16
293 294 7.502120 AAACCCAATGAATCGAGATATCTTG 57.498 36.000 13.18 13.18 0.00 3.02
294 295 9.799106 AATAAACCCAATGAATCGAGATATCTT 57.201 29.630 6.70 0.00 0.00 2.40
295 296 9.224267 CAATAAACCCAATGAATCGAGATATCT 57.776 33.333 4.47 4.47 0.00 1.98
296 297 9.003658 ACAATAAACCCAATGAATCGAGATATC 57.996 33.333 0.00 0.00 0.00 1.63
297 298 8.786898 CACAATAAACCCAATGAATCGAGATAT 58.213 33.333 0.00 0.00 0.00 1.63
298 299 8.153479 CACAATAAACCCAATGAATCGAGATA 57.847 34.615 0.00 0.00 0.00 1.98
299 300 7.031226 CACAATAAACCCAATGAATCGAGAT 57.969 36.000 0.00 0.00 0.00 2.75
300 301 6.435430 CACAATAAACCCAATGAATCGAGA 57.565 37.500 0.00 0.00 0.00 4.04
746 747 8.623030 CAAAACCAAAAATGGTCTGAAAATGAT 58.377 29.630 0.20 0.00 42.20 2.45
921 922 8.193438 GCAGAAACTTGATGCTTTTAATCCTAT 58.807 33.333 0.00 0.00 37.00 2.57
922 923 7.362920 GGCAGAAACTTGATGCTTTTAATCCTA 60.363 37.037 0.00 0.00 39.88 2.94
923 924 6.393171 GCAGAAACTTGATGCTTTTAATCCT 58.607 36.000 0.00 0.00 37.00 3.24
924 925 5.578336 GGCAGAAACTTGATGCTTTTAATCC 59.422 40.000 0.00 0.00 39.88 3.01
925 926 5.578336 GGGCAGAAACTTGATGCTTTTAATC 59.422 40.000 0.00 0.00 39.88 1.75
926 927 5.011943 TGGGCAGAAACTTGATGCTTTTAAT 59.988 36.000 0.00 0.00 39.88 1.40
927 928 4.343526 TGGGCAGAAACTTGATGCTTTTAA 59.656 37.500 0.00 0.00 39.88 1.52
928 929 3.894427 TGGGCAGAAACTTGATGCTTTTA 59.106 39.130 0.00 0.00 39.88 1.52
929 930 2.699846 TGGGCAGAAACTTGATGCTTTT 59.300 40.909 0.00 0.00 39.88 2.27
930 931 2.318908 TGGGCAGAAACTTGATGCTTT 58.681 42.857 0.00 0.00 39.88 3.51
931 932 1.999648 TGGGCAGAAACTTGATGCTT 58.000 45.000 0.00 0.00 39.88 3.91
932 933 2.226962 ATGGGCAGAAACTTGATGCT 57.773 45.000 0.00 0.00 39.88 3.79
933 934 4.454728 TTAATGGGCAGAAACTTGATGC 57.545 40.909 0.00 0.00 39.25 3.91
934 935 7.153985 TCTTTTTAATGGGCAGAAACTTGATG 58.846 34.615 0.00 0.00 0.00 3.07
935 936 7.301868 TCTTTTTAATGGGCAGAAACTTGAT 57.698 32.000 0.00 0.00 0.00 2.57
936 937 6.723298 TCTTTTTAATGGGCAGAAACTTGA 57.277 33.333 0.00 0.00 0.00 3.02
937 938 6.986231 AGTTCTTTTTAATGGGCAGAAACTTG 59.014 34.615 0.00 0.00 0.00 3.16
938 939 6.986231 CAGTTCTTTTTAATGGGCAGAAACTT 59.014 34.615 0.00 0.00 0.00 2.66
939 940 6.323739 TCAGTTCTTTTTAATGGGCAGAAACT 59.676 34.615 0.00 0.00 0.00 2.66
940 941 6.512297 TCAGTTCTTTTTAATGGGCAGAAAC 58.488 36.000 0.00 0.00 0.00 2.78
941 942 6.723298 TCAGTTCTTTTTAATGGGCAGAAA 57.277 33.333 0.00 0.00 0.00 2.52
942 943 6.723298 TTCAGTTCTTTTTAATGGGCAGAA 57.277 33.333 0.00 0.00 0.00 3.02
943 944 6.723298 TTTCAGTTCTTTTTAATGGGCAGA 57.277 33.333 0.00 0.00 0.00 4.26
944 945 6.424812 CCTTTTCAGTTCTTTTTAATGGGCAG 59.575 38.462 0.00 0.00 0.00 4.85
945 946 6.098982 TCCTTTTCAGTTCTTTTTAATGGGCA 59.901 34.615 0.00 0.00 0.00 5.36
946 947 6.521162 TCCTTTTCAGTTCTTTTTAATGGGC 58.479 36.000 0.00 0.00 0.00 5.36
947 948 8.826710 GTTTCCTTTTCAGTTCTTTTTAATGGG 58.173 33.333 0.00 0.00 0.00 4.00
948 949 8.826710 GGTTTCCTTTTCAGTTCTTTTTAATGG 58.173 33.333 0.00 0.00 0.00 3.16
949 950 8.539674 CGGTTTCCTTTTCAGTTCTTTTTAATG 58.460 33.333 0.00 0.00 0.00 1.90
950 951 8.471609 TCGGTTTCCTTTTCAGTTCTTTTTAAT 58.528 29.630 0.00 0.00 0.00 1.40
951 952 7.828712 TCGGTTTCCTTTTCAGTTCTTTTTAA 58.171 30.769 0.00 0.00 0.00 1.52
952 953 7.393841 TCGGTTTCCTTTTCAGTTCTTTTTA 57.606 32.000 0.00 0.00 0.00 1.52
953 954 6.275494 TCGGTTTCCTTTTCAGTTCTTTTT 57.725 33.333 0.00 0.00 0.00 1.94
954 955 5.678871 GCTCGGTTTCCTTTTCAGTTCTTTT 60.679 40.000 0.00 0.00 0.00 2.27
955 956 4.202020 GCTCGGTTTCCTTTTCAGTTCTTT 60.202 41.667 0.00 0.00 0.00 2.52
956 957 3.315470 GCTCGGTTTCCTTTTCAGTTCTT 59.685 43.478 0.00 0.00 0.00 2.52
957 958 2.879026 GCTCGGTTTCCTTTTCAGTTCT 59.121 45.455 0.00 0.00 0.00 3.01
958 959 2.031069 GGCTCGGTTTCCTTTTCAGTTC 60.031 50.000 0.00 0.00 0.00 3.01
959 960 1.954382 GGCTCGGTTTCCTTTTCAGTT 59.046 47.619 0.00 0.00 0.00 3.16
960 961 1.143073 AGGCTCGGTTTCCTTTTCAGT 59.857 47.619 0.00 0.00 0.00 3.41
961 962 1.807142 GAGGCTCGGTTTCCTTTTCAG 59.193 52.381 0.00 0.00 31.71 3.02
962 963 1.876416 CGAGGCTCGGTTTCCTTTTCA 60.876 52.381 28.52 0.00 36.00 2.69
963 964 0.796927 CGAGGCTCGGTTTCCTTTTC 59.203 55.000 28.52 0.00 36.00 2.29
964 965 0.395312 TCGAGGCTCGGTTTCCTTTT 59.605 50.000 33.93 0.00 40.88 2.27
965 966 0.395312 TTCGAGGCTCGGTTTCCTTT 59.605 50.000 33.93 0.00 40.88 3.11
966 967 0.320508 GTTCGAGGCTCGGTTTCCTT 60.321 55.000 33.93 0.00 40.88 3.36
967 968 1.292541 GTTCGAGGCTCGGTTTCCT 59.707 57.895 33.93 0.00 40.88 3.36
968 969 1.740664 GGTTCGAGGCTCGGTTTCC 60.741 63.158 33.93 24.82 40.88 3.13
969 970 0.601841 TTGGTTCGAGGCTCGGTTTC 60.602 55.000 33.93 21.16 40.88 2.78
970 971 0.179040 TTTGGTTCGAGGCTCGGTTT 60.179 50.000 33.93 0.00 40.88 3.27
971 972 0.883370 GTTTGGTTCGAGGCTCGGTT 60.883 55.000 33.93 0.00 40.88 4.44
972 973 1.301479 GTTTGGTTCGAGGCTCGGT 60.301 57.895 33.93 0.00 40.88 4.69
1013 1016 1.217882 GAGATTATGGGCCAACGTCG 58.782 55.000 11.89 0.00 0.00 5.12
1016 1019 1.949525 CAAGGAGATTATGGGCCAACG 59.050 52.381 11.89 0.00 0.00 4.10
1017 1020 1.683385 GCAAGGAGATTATGGGCCAAC 59.317 52.381 11.89 2.53 0.00 3.77
1431 1434 2.971901 TGTGTGTGAGGAGAGAGGTA 57.028 50.000 0.00 0.00 0.00 3.08
1434 1437 2.097304 CGAGATGTGTGTGAGGAGAGAG 59.903 54.545 0.00 0.00 0.00 3.20
1438 1441 0.891373 ACCGAGATGTGTGTGAGGAG 59.109 55.000 0.00 0.00 0.00 3.69
1439 1442 0.888619 GACCGAGATGTGTGTGAGGA 59.111 55.000 0.00 0.00 0.00 3.71
1514 1534 4.337836 GGATCTCCATTTCAAGAAGCTTCC 59.662 45.833 22.81 5.35 35.64 3.46
1517 1537 4.581309 TGGATCTCCATTTCAAGAAGCT 57.419 40.909 0.00 0.00 42.01 3.74
1539 1559 8.267894 ACTAACATCTACTGCCAATAAACTCAT 58.732 33.333 0.00 0.00 0.00 2.90
1557 1577 5.611844 CGAAACAAAGTCGTGGACTAACATC 60.612 44.000 0.00 0.00 42.59 3.06
1592 1612 3.290710 CTCAAATTGGTCATAGTGGGGG 58.709 50.000 0.00 0.00 0.00 5.40
1595 1615 6.878923 TCAACTACTCAAATTGGTCATAGTGG 59.121 38.462 0.00 0.00 0.00 4.00
1613 1633 9.132521 CAAAATCATGGAATTTCTGTCAACTAC 57.867 33.333 0.00 0.00 0.00 2.73
1629 1649 2.350899 TTCGTGCAGCAAAATCATGG 57.649 45.000 0.00 0.00 0.00 3.66
1639 1659 2.346803 TCTCCTGTTAATTCGTGCAGC 58.653 47.619 0.00 0.00 0.00 5.25
1643 1663 5.050490 CCCACTATCTCCTGTTAATTCGTG 58.950 45.833 0.00 0.00 0.00 4.35
1649 1669 2.771943 CTGCCCCACTATCTCCTGTTAA 59.228 50.000 0.00 0.00 0.00 2.01
1687 1707 0.107459 CTGCCTCTCTTACCCTTGGC 60.107 60.000 0.00 0.00 40.62 4.52
1688 1708 1.208293 GTCTGCCTCTCTTACCCTTGG 59.792 57.143 0.00 0.00 0.00 3.61
1703 1883 2.224161 ACAGAGGTTCTTCACTGTCTGC 60.224 50.000 0.00 0.00 38.95 4.26
1736 1916 4.935352 TGTCTCCCTTTCACCATTTTTG 57.065 40.909 0.00 0.00 0.00 2.44
1744 1959 5.124617 GGAAGATCAAATGTCTCCCTTTCAC 59.875 44.000 0.00 0.00 0.00 3.18
1745 1960 5.014544 AGGAAGATCAAATGTCTCCCTTTCA 59.985 40.000 0.00 0.00 0.00 2.69
1783 1998 3.503827 TGGCTCACAGAAGTATGTACG 57.496 47.619 0.00 0.00 0.00 3.67
1816 2035 2.014128 CGCATTTCGAATAACCCTGGT 58.986 47.619 0.00 0.00 41.67 4.00
1871 2090 0.454600 CGCCGTTAAGCTACCTCAGA 59.545 55.000 0.00 0.00 0.00 3.27
1913 2139 4.036380 ACGGCTAGAGTTTTGAAAGGTTTG 59.964 41.667 0.00 0.00 0.00 2.93
1922 2148 5.411781 AGTCATTCTACGGCTAGAGTTTTG 58.588 41.667 0.00 0.00 30.31 2.44
1935 2161 3.526931 TGGCAGTGCTAGTCATTCTAC 57.473 47.619 16.11 0.00 0.00 2.59
1973 2199 6.657117 TCCGGAGATGAAAATACACAATTTCA 59.343 34.615 0.00 3.71 46.23 2.69
1979 2205 4.503910 CTGTCCGGAGATGAAAATACACA 58.496 43.478 3.06 0.00 0.00 3.72
2096 2322 5.590259 GGATGTGAAGTGCTAAACATGGTAT 59.410 40.000 0.00 0.00 33.51 2.73
2122 2348 2.502947 TGCATGAGCCAAGTATGACTCT 59.497 45.455 0.00 0.00 37.02 3.24
2123 2349 2.611292 GTGCATGAGCCAAGTATGACTC 59.389 50.000 0.00 0.00 41.13 3.36
2304 2532 6.484288 TGATTCTAAGAATGGAAGAAAGCCA 58.516 36.000 0.00 0.00 40.24 4.75
2305 2533 7.284034 TGATGATTCTAAGAATGGAAGAAAGCC 59.716 37.037 0.00 0.00 33.26 4.35
2309 2537 7.997223 AGCATGATGATTCTAAGAATGGAAGAA 59.003 33.333 0.00 0.00 34.00 2.52
2336 2564 5.888161 ACAGGATCTAACCAGCCAAAATAAG 59.112 40.000 0.00 0.00 0.00 1.73
2367 2608 5.163141 TGTGGTTATCCAGAAAAGACCTTCA 60.163 40.000 0.00 0.00 45.24 3.02
2554 2796 0.108377 TATGCGTAGTGTGGGCTGTG 60.108 55.000 0.00 0.00 0.00 3.66
2559 2801 4.394920 AGTTCAAAATATGCGTAGTGTGGG 59.605 41.667 3.83 0.00 0.00 4.61
2578 2820 6.578023 AGGTAGAAGCTGACAATCATAGTTC 58.422 40.000 0.00 0.00 0.00 3.01
2593 2835 5.354842 AGTACCATGGTAAAGGTAGAAGC 57.645 43.478 26.19 9.69 40.83 3.86
2598 2840 6.108015 CGCTTTAAGTACCATGGTAAAGGTA 58.892 40.000 27.54 15.99 39.31 3.08
2680 2922 8.945193 TGGGTAAGGAGAATAAGCTGTATAAAT 58.055 33.333 0.00 0.00 0.00 1.40
2816 3058 9.918630 GCATAGTAATTTTCAATTGATAGGCAT 57.081 29.630 9.40 0.00 0.00 4.40
2994 3237 7.970614 GCTTCCCTAAACAACTCATGAATTTAG 59.029 37.037 15.20 15.20 34.19 1.85
3119 3445 2.277084 GATGTTGGCGTGTTAGGTAGG 58.723 52.381 0.00 0.00 0.00 3.18
3122 3448 0.690762 AGGATGTTGGCGTGTTAGGT 59.309 50.000 0.00 0.00 0.00 3.08
3129 3455 0.036388 CACAGGTAGGATGTTGGCGT 60.036 55.000 0.00 0.00 0.00 5.68
3130 3456 0.249120 TCACAGGTAGGATGTTGGCG 59.751 55.000 0.00 0.00 0.00 5.69
3187 3513 5.276270 CCCTTATGACTGAATGCAAATTCG 58.724 41.667 0.00 0.00 33.42 3.34
3243 3569 7.258441 TCCGTATCTAGACAAATCAAAGACAG 58.742 38.462 0.00 0.00 0.00 3.51
3301 3627 9.454859 ACTTGTCTTGGATTTTTCTAGATAAGG 57.545 33.333 0.00 0.00 37.97 2.69
3309 3635 7.309194 CCCGAATTACTTGTCTTGGATTTTTCT 60.309 37.037 0.00 0.00 0.00 2.52
3318 3644 2.671396 CCGTCCCGAATTACTTGTCTTG 59.329 50.000 0.00 0.00 0.00 3.02
3364 3690 6.566197 AAGACCATTGTTCTTGATGAAGAC 57.434 37.500 0.00 0.00 37.97 3.01
3381 3707 6.013379 AGTTCAGATGATCCTACAAAAGACCA 60.013 38.462 0.00 0.00 0.00 4.02
3418 3744 7.010697 TGTGTAACTTGTGTATTGTCAACAG 57.989 36.000 0.00 0.00 38.04 3.16
3424 3750 6.320164 ACATGGTTGTGTAACTTGTGTATTGT 59.680 34.615 0.00 0.00 38.04 2.71
3426 3752 6.952773 ACATGGTTGTGTAACTTGTGTATT 57.047 33.333 0.00 0.00 38.04 1.89
3448 3779 4.695455 TCAATGTAGCCACTAAGCTTGAAC 59.305 41.667 9.86 0.00 41.41 3.18
3450 3781 4.020218 AGTCAATGTAGCCACTAAGCTTGA 60.020 41.667 9.86 0.00 41.41 3.02
3471 3802 5.757850 AGAGAATCGAGCAAAACAAAAGT 57.242 34.783 0.00 0.00 42.67 2.66
3553 3884 8.034215 GGGATCAAATCAATGTTTTCACATACA 58.966 33.333 0.00 0.00 43.34 2.29
3651 3982 8.593945 ATCCATACAAATGACAACATAAACCT 57.406 30.769 0.00 0.00 35.50 3.50
3711 4042 1.383109 TGGAGACGGCCCTGATCAT 60.383 57.895 0.00 0.00 0.00 2.45
3947 4312 9.967451 TTCATTTCAAGAAATACTACATGGGTA 57.033 29.630 7.65 0.18 38.84 3.69
3963 4328 8.834465 AGGTATGATCGAAGATTTCATTTCAAG 58.166 33.333 3.94 0.00 45.12 3.02
3966 4334 8.830580 TGAAGGTATGATCGAAGATTTCATTTC 58.169 33.333 3.94 3.69 45.12 2.17
3967 4335 8.737168 TGAAGGTATGATCGAAGATTTCATTT 57.263 30.769 3.94 0.00 45.12 2.32
4074 4457 5.712152 AGCATAGGAAGAAAACCAAACTG 57.288 39.130 0.00 0.00 0.00 3.16
4080 4463 5.164233 GCTGAAAAGCATAGGAAGAAAACC 58.836 41.667 0.00 0.00 34.41 3.27
4194 4592 9.241317 GATGAAATATGTTTTATGCAAGGTGAG 57.759 33.333 0.00 0.00 0.00 3.51
4252 4650 9.656040 TTTATTTTGCTAGTGTAGGATCGTTTA 57.344 29.630 0.00 0.00 0.00 2.01
4259 4657 7.501225 GCCCTATTTTATTTTGCTAGTGTAGGA 59.499 37.037 0.00 0.00 0.00 2.94
4312 4710 2.737180 CGCTATGGGCATCGTCCT 59.263 61.111 0.00 0.00 41.91 3.85
4324 4723 5.163581 CCGTATTAGGTATTACAGCCGCTAT 60.164 44.000 0.00 0.00 0.00 2.97
4453 6736 3.583228 AGATCGAGGAGAGGTCTCTAGA 58.417 50.000 6.94 0.00 42.48 2.43
4499 6782 1.133253 CATCGCACGCACTTTCCAG 59.867 57.895 0.00 0.00 0.00 3.86
4500 6783 2.965147 GCATCGCACGCACTTTCCA 61.965 57.895 0.00 0.00 0.00 3.53
4501 6784 2.202349 GCATCGCACGCACTTTCC 60.202 61.111 0.00 0.00 0.00 3.13
4580 6870 0.818445 CAGGCAGCCCATTCTAGCAG 60.818 60.000 8.22 0.00 0.00 4.24
4668 6966 0.770499 CACAGGGCCCCCAAATTTTT 59.230 50.000 21.43 0.00 38.92 1.94
4727 7025 1.143481 CTGGCCCCACATGACATCATA 59.857 52.381 0.00 0.00 34.26 2.15
4728 7026 0.106369 CTGGCCCCACATGACATCAT 60.106 55.000 0.00 0.00 36.96 2.45
4729 7027 1.206811 TCTGGCCCCACATGACATCA 61.207 55.000 0.00 0.00 0.00 3.07
4730 7028 0.749454 GTCTGGCCCCACATGACATC 60.749 60.000 0.00 0.00 0.00 3.06
4731 7029 1.210204 AGTCTGGCCCCACATGACAT 61.210 55.000 0.00 0.00 0.00 3.06
4732 7030 1.426251 AAGTCTGGCCCCACATGACA 61.426 55.000 0.00 0.00 0.00 3.58
4733 7031 0.618458 TAAGTCTGGCCCCACATGAC 59.382 55.000 0.00 0.00 0.00 3.06
4734 7032 1.595311 ATAAGTCTGGCCCCACATGA 58.405 50.000 0.00 0.00 0.00 3.07
4735 7033 2.224621 CCTATAAGTCTGGCCCCACATG 60.225 54.545 0.00 0.00 0.00 3.21
4736 7034 2.057922 CCTATAAGTCTGGCCCCACAT 58.942 52.381 0.00 0.00 0.00 3.21
4771 7069 1.198759 TGGGACAGAACTAGGGTGGC 61.199 60.000 0.00 0.00 0.00 5.01
4809 7107 7.899709 ACCCAGACTCTTTAACCTAAATCTAGA 59.100 37.037 0.00 0.00 0.00 2.43
4810 7108 8.080363 ACCCAGACTCTTTAACCTAAATCTAG 57.920 38.462 0.00 0.00 0.00 2.43
4811 7109 7.899709 AGACCCAGACTCTTTAACCTAAATCTA 59.100 37.037 0.00 0.00 0.00 1.98
4897 7195 5.050490 GCCTATTACAATGACGTGACAGAT 58.950 41.667 0.00 0.00 0.00 2.90
4941 7278 6.480524 TTTTCTGGTTGTACTCATTGATCG 57.519 37.500 0.00 0.00 0.00 3.69
5111 7448 9.249053 TGTTTAACCAGGATAAATTCAAGCATA 57.751 29.630 5.27 0.00 0.00 3.14
5112 7449 8.133024 TGTTTAACCAGGATAAATTCAAGCAT 57.867 30.769 5.27 0.00 0.00 3.79
5166 7532 7.864379 CAGGAAATCCATATAAATGTTGTCTGC 59.136 37.037 1.67 0.00 38.89 4.26
5228 8210 2.887783 ACGGGACATGTAGAGCTATGAG 59.112 50.000 0.00 0.00 0.00 2.90
5370 8357 7.038659 GTGTCTGCTTGACTGATAGATAGTTT 58.961 38.462 10.73 0.00 45.54 2.66
5391 8378 0.818040 ACAGAACAAAGGGCGGTGTC 60.818 55.000 0.00 0.00 0.00 3.67
5457 9316 4.911610 CGACAAAAGTTCAAAAGCATCGAT 59.088 37.500 0.00 0.00 0.00 3.59
5460 9319 5.034152 TGTCGACAAAAGTTCAAAAGCATC 58.966 37.500 17.62 0.00 0.00 3.91
5687 9553 6.645700 TGAAGCAACAATTTCTCAACAAAC 57.354 33.333 0.00 0.00 0.00 2.93
5699 9565 6.094603 GTCTGTATCATCCTTGAAGCAACAAT 59.905 38.462 0.00 0.00 34.96 2.71
5765 9631 2.817258 GCAGGGTGCAAGTGTACAATAA 59.183 45.455 0.00 0.00 44.26 1.40
5824 9694 3.759086 GGACTGTGATCAGAGTGTACAGA 59.241 47.826 28.52 0.00 43.76 3.41
5888 9759 3.047115 AGGACATGAGAGAGCATTCCAT 58.953 45.455 0.00 0.00 32.58 3.41
5897 9768 4.286808 TCATCCAACAAAGGACATGAGAGA 59.713 41.667 0.00 0.00 41.30 3.10
6005 9876 5.928153 TCGACATAGCTGAATCATACGTAG 58.072 41.667 0.08 0.00 0.00 3.51
6057 10025 4.537965 CGTACACATAGACCATGCTACTC 58.462 47.826 0.00 0.00 38.29 2.59
6269 10237 9.282247 GCAGTTCAATATTCTAACATTGAGTTG 57.718 33.333 11.08 2.38 41.02 3.16
6362 10342 1.492720 GCTAGATAACACAGCGCTCC 58.507 55.000 7.13 0.00 0.00 4.70
6417 10398 4.154918 GCGGAAAGATTCACAAGATCTGTT 59.845 41.667 0.00 0.00 35.47 3.16
6420 10401 3.274288 GGCGGAAAGATTCACAAGATCT 58.726 45.455 0.00 0.00 0.00 2.75
6421 10402 3.009723 TGGCGGAAAGATTCACAAGATC 58.990 45.455 0.00 0.00 0.00 2.75
6456 10439 7.659390 GGATAGATTCAGAAGATTTGGGTACTG 59.341 40.741 0.00 0.00 0.00 2.74
6457 10440 7.472100 CGGATAGATTCAGAAGATTTGGGTACT 60.472 40.741 0.00 0.00 0.00 2.73
6496 10479 1.581934 CATGTACATGCACCGTAGGG 58.418 55.000 22.27 0.00 41.99 3.53
6550 10533 4.098654 CAGTACACTAGGCAAGATAGCACT 59.901 45.833 0.00 0.00 35.83 4.40
6570 10553 0.396811 AGAAGTTACGGCCTTGCAGT 59.603 50.000 0.00 0.00 40.45 4.40
6639 10651 5.171476 CAGAATAATATCCTGTAGCCCACG 58.829 45.833 0.00 0.00 0.00 4.94
6702 13286 2.745100 GGACGGAGCCGAAAACCC 60.745 66.667 16.83 4.86 42.83 4.11
6881 13473 2.124983 CAGTCCGCCCTGTGGATG 60.125 66.667 0.00 0.00 44.40 3.51
6895 13487 1.727022 GCGCACGTACGTACACAGT 60.727 57.895 22.34 12.13 34.88 3.55
6896 13488 1.441515 AGCGCACGTACGTACACAG 60.442 57.895 22.34 9.54 34.88 3.66
6898 13490 3.058351 CAGCGCACGTACGTACAC 58.942 61.111 22.34 9.81 34.88 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.