Multiple sequence alignment - TraesCS3A01G146800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G146800 chr3A 100.000 6497 0 0 1 6497 128528677 128522181 0.000000e+00 11998.0
1 TraesCS3A01G146800 chr3A 86.667 105 12 2 3750 3853 261350890 261350993 1.480000e-21 115.0
2 TraesCS3A01G146800 chr3A 87.805 82 10 0 3586 3667 658633722 658633641 5.360000e-16 97.1
3 TraesCS3A01G146800 chr3A 86.905 84 11 0 3586 3669 606439408 606439491 1.930000e-15 95.3
4 TraesCS3A01G146800 chr1A 97.765 3937 79 8 572 4504 389868919 389872850 0.000000e+00 6774.0
5 TraesCS3A01G146800 chr1A 94.022 2024 94 16 4492 6497 389873777 389875791 0.000000e+00 3042.0
6 TraesCS3A01G146800 chr1A 91.512 377 27 4 1 372 389868538 389868914 1.250000e-141 514.0
7 TraesCS3A01G146800 chr1A 86.364 110 12 3 3747 3853 104946055 104946164 4.120000e-22 117.0
8 TraesCS3A01G146800 chr1D 94.820 2278 79 16 3810 6066 310143079 310145338 0.000000e+00 3517.0
9 TraesCS3A01G146800 chr1D 93.408 1426 63 13 572 1984 310140158 310141565 0.000000e+00 2084.0
10 TraesCS3A01G146800 chr1D 92.630 597 24 9 2992 3585 310142294 310142873 0.000000e+00 841.0
11 TraesCS3A01G146800 chr1D 86.965 491 28 10 1993 2451 310141605 310142091 2.680000e-143 520.0
12 TraesCS3A01G146800 chr1D 93.220 354 19 4 1 349 310139796 310140149 3.470000e-142 516.0
13 TraesCS3A01G146800 chr1D 82.857 455 55 7 6048 6497 310146841 310147277 2.840000e-103 387.0
14 TraesCS3A01G146800 chr1D 95.833 96 3 1 479 573 212433010 212432915 3.140000e-33 154.0
15 TraesCS3A01G146800 chr1D 93.023 86 6 0 2513 2598 310142088 310142173 6.840000e-25 126.0
16 TraesCS3A01G146800 chr1B 94.268 2198 99 9 3664 5851 420234507 420236687 0.000000e+00 3336.0
17 TraesCS3A01G146800 chr1B 89.121 1866 95 38 670 2451 420231539 420233380 0.000000e+00 2222.0
18 TraesCS3A01G146800 chr1B 92.544 912 56 6 2681 3585 420233575 420234481 0.000000e+00 1297.0
19 TraesCS3A01G146800 chr1B 89.205 176 17 2 2521 2695 420233386 420233560 1.100000e-52 219.0
20 TraesCS3A01G146800 chr1B 87.850 107 10 2 3750 3853 301273396 301273502 8.850000e-24 122.0
21 TraesCS3A01G146800 chr1B 85.586 111 13 3 3747 3854 370729985 370729875 5.320000e-21 113.0
22 TraesCS3A01G146800 chrUn 100.000 393 0 0 2679 3071 479646003 479646395 0.000000e+00 726.0
23 TraesCS3A01G146800 chrUn 95.833 96 3 1 479 573 233521131 233521226 3.140000e-33 154.0
24 TraesCS3A01G146800 chrUn 95.833 96 3 1 479 573 428544465 428544370 3.140000e-33 154.0
25 TraesCS3A01G146800 chrUn 100.000 50 0 0 429 478 45072637 45072686 6.940000e-15 93.5
26 TraesCS3A01G146800 chrUn 100.000 50 0 0 429 478 273236448 273236497 6.940000e-15 93.5
27 TraesCS3A01G146800 chrUn 100.000 50 0 0 429 478 428854818 428854769 6.940000e-15 93.5
28 TraesCS3A01G146800 chrUn 100.000 50 0 0 429 478 432306537 432306586 6.940000e-15 93.5
29 TraesCS3A01G146800 chr7A 83.577 274 42 3 6153 6423 591874096 591873823 3.010000e-63 254.0
30 TraesCS3A01G146800 chr7A 87.342 79 10 0 3586 3664 47783825 47783747 2.490000e-14 91.6
31 TraesCS3A01G146800 chr4D 78.780 377 67 6 6050 6423 39296676 39296310 2.340000e-59 241.0
32 TraesCS3A01G146800 chr4D 95.833 96 3 1 479 573 123693103 123693008 3.140000e-33 154.0
33 TraesCS3A01G146800 chr4D 100.000 50 0 0 429 478 240973449 240973400 6.940000e-15 93.5
34 TraesCS3A01G146800 chr4D 100.000 50 0 0 429 478 424978257 424978208 6.940000e-15 93.5
35 TraesCS3A01G146800 chr5D 78.215 381 75 8 6048 6423 394834269 394834646 3.030000e-58 237.0
36 TraesCS3A01G146800 chr2A 80.427 281 52 3 6145 6422 718621246 718620966 1.840000e-50 211.0
37 TraesCS3A01G146800 chr2A 91.358 81 6 1 3586 3666 685386070 685385991 6.890000e-20 110.0
38 TraesCS3A01G146800 chr4B 80.515 272 49 4 6145 6412 58567352 58567623 8.540000e-49 206.0
39 TraesCS3A01G146800 chr4B 95.833 96 3 1 479 573 536110343 536110248 3.140000e-33 154.0
40 TraesCS3A01G146800 chr4B 100.000 50 0 0 429 478 365628522 365628571 6.940000e-15 93.5
41 TraesCS3A01G146800 chr3D 85.052 194 29 0 6230 6423 186934316 186934509 1.430000e-46 198.0
42 TraesCS3A01G146800 chr3D 92.958 71 1 3 6429 6497 186935139 186935207 4.150000e-17 100.0
43 TraesCS3A01G146800 chr6D 78.777 278 54 4 6146 6420 372427052 372426777 1.440000e-41 182.0
44 TraesCS3A01G146800 chr6D 78.755 273 53 5 6147 6416 298210600 298210870 1.860000e-40 178.0
45 TraesCS3A01G146800 chr6D 77.592 299 53 7 6117 6410 315682404 315682693 1.120000e-37 169.0
46 TraesCS3A01G146800 chr6D 86.885 61 3 4 2460 2515 306200986 306201046 5.440000e-06 63.9
47 TraesCS3A01G146800 chr5B 77.244 312 53 16 6116 6423 575068236 575067939 4.030000e-37 167.0
48 TraesCS3A01G146800 chr5B 88.696 115 8 4 3743 3853 440275832 440275945 1.140000e-27 135.0
49 TraesCS3A01G146800 chr7D 95.833 96 3 1 479 573 578994888 578994793 3.140000e-33 154.0
50 TraesCS3A01G146800 chr7D 98.113 53 1 0 429 481 606898967 606898915 6.940000e-15 93.5
51 TraesCS3A01G146800 chr7D 95.652 46 1 1 5963 6008 494934714 494934670 9.040000e-09 73.1
52 TraesCS3A01G146800 chr2D 95.833 96 3 1 479 573 17988459 17988364 3.140000e-33 154.0
53 TraesCS3A01G146800 chr2D 95.833 96 3 1 479 573 200953984 200954079 3.140000e-33 154.0
54 TraesCS3A01G146800 chr2D 95.833 96 3 1 479 573 637304564 637304659 3.140000e-33 154.0
55 TraesCS3A01G146800 chr2D 100.000 50 0 0 429 478 635034911 635034960 6.940000e-15 93.5
56 TraesCS3A01G146800 chr7B 87.387 111 8 5 3748 3853 216938224 216938333 8.850000e-24 122.0
57 TraesCS3A01G146800 chr7B 96.923 65 2 0 6433 6497 204098039 204097975 6.890000e-20 110.0
58 TraesCS3A01G146800 chr7B 89.024 82 9 0 3586 3667 393046788 393046869 1.150000e-17 102.0
59 TraesCS3A01G146800 chr6A 91.358 81 7 0 3586 3666 583383286 583383206 1.910000e-20 111.0
60 TraesCS3A01G146800 chr6A 85.714 91 9 3 6144 6231 49464692 49464781 6.940000e-15 93.5
61 TraesCS3A01G146800 chr2B 85.981 107 10 5 3751 3853 161412326 161412221 6.890000e-20 110.0
62 TraesCS3A01G146800 chr3B 94.286 70 4 0 6428 6497 661180233 661180164 2.480000e-19 108.0
63 TraesCS3A01G146800 chr4A 89.610 77 8 0 3586 3662 144841376 144841300 1.490000e-16 99.0
64 TraesCS3A01G146800 chr4A 87.342 79 10 0 3586 3664 27273306 27273384 2.490000e-14 91.6
65 TraesCS3A01G146800 chr5A 76.536 179 38 4 6045 6219 495095593 495095415 1.930000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G146800 chr3A 128522181 128528677 6496 True 11998.000000 11998 100.0000 1 6497 1 chr3A.!!$R1 6496
1 TraesCS3A01G146800 chr1A 389868538 389875791 7253 False 3443.333333 6774 94.4330 1 6497 3 chr1A.!!$F2 6496
2 TraesCS3A01G146800 chr1D 310139796 310147277 7481 False 1141.571429 3517 90.9890 1 6497 7 chr1D.!!$F1 6496
3 TraesCS3A01G146800 chr1B 420231539 420236687 5148 False 1768.500000 3336 91.2845 670 5851 4 chr1B.!!$F2 5181

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
523 529 0.108963 CCCACCCCAACGTTCTTGTA 59.891 55.000 0.00 0.00 0.00 2.41 F
549 555 0.179000 AATACTCTCCCCGCTTGCTG 59.821 55.000 0.00 0.00 0.00 4.41 F
697 703 0.321919 TCTGGAGCCATCTGTGTTGC 60.322 55.000 0.00 0.00 0.00 4.17 F
866 878 0.996762 AACCTCCACCAACTTCCCCA 60.997 55.000 0.00 0.00 0.00 4.96 F
2040 2128 1.202417 TGACGGCGATTGAATCTCTCC 60.202 52.381 16.62 1.43 0.00 3.71 F
2677 2803 0.393808 ACACGCATGACCCCCATAAC 60.394 55.000 0.00 0.00 33.31 1.89 F
3523 3691 0.806102 ACGATGAATTCACCTCGCCG 60.806 55.000 24.35 16.37 33.17 6.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1930 1985 0.757935 TTCGCCGGCTATTACCCTCT 60.758 55.000 26.68 0.0 0.00 3.69 R
2134 2235 1.301401 TACGCAAGCCTGTGGTCAC 60.301 57.895 0.19 0.0 45.62 3.67 R
2512 2637 2.306805 TCACCCTGACAATTGATCTGCT 59.693 45.455 13.59 0.0 0.00 4.24 R
2634 2760 4.365899 ACTTTTCCTCCGTTTTCAACAC 57.634 40.909 0.00 0.0 0.00 3.32 R
3642 3810 1.475213 GGGCCTCTTTGATTCGTAGGG 60.475 57.143 0.84 0.0 0.00 3.53 R
4437 4639 2.843545 GGGGGCTCCACAGTGAAA 59.156 61.111 4.16 0.0 35.00 2.69 R
5572 6721 2.185310 ATCACTTCACCCCACTCCGC 62.185 60.000 0.00 0.0 0.00 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 0.109272 GTCGTCATCGAGAAGGTGCA 60.109 55.000 0.00 0.00 46.96 4.57
94 95 1.195115 GATGCAGTACTGGTCCCTGA 58.805 55.000 23.95 0.00 0.00 3.86
133 138 2.972505 CAAGGTGCGCGTGGACTT 60.973 61.111 20.19 10.28 36.55 3.01
257 263 4.680237 CGCGGTGCTGGAAGGTGA 62.680 66.667 0.00 0.00 0.00 4.02
278 284 0.750911 GGAGATGCAGGGCTTCTTGG 60.751 60.000 7.86 0.00 41.89 3.61
280 286 1.679977 GATGCAGGGCTTCTTGGCA 60.680 57.895 0.00 0.00 43.83 4.92
284 290 3.185203 AGGGCTTCTTGGCACCCA 61.185 61.111 12.21 0.00 45.45 4.51
363 369 0.317479 CGAGTCGAAGTTTGGTCCCT 59.683 55.000 6.73 0.00 0.00 4.20
372 378 1.202770 AGTTTGGTCCCTTCCTTCACG 60.203 52.381 0.00 0.00 0.00 4.35
374 380 0.765135 TTGGTCCCTTCCTTCACGGA 60.765 55.000 0.00 0.00 41.06 4.69
375 381 1.295746 GGTCCCTTCCTTCACGGAC 59.704 63.158 0.00 0.00 42.97 4.79
376 382 1.192803 GGTCCCTTCCTTCACGGACT 61.193 60.000 5.17 0.00 42.97 3.85
377 383 0.685660 GTCCCTTCCTTCACGGACTT 59.314 55.000 0.00 0.00 42.97 3.01
378 384 1.071857 GTCCCTTCCTTCACGGACTTT 59.928 52.381 0.00 0.00 42.97 2.66
379 385 1.346722 TCCCTTCCTTCACGGACTTTC 59.653 52.381 0.00 0.00 42.97 2.62
380 386 1.348036 CCCTTCCTTCACGGACTTTCT 59.652 52.381 0.00 0.00 42.97 2.52
381 387 2.417719 CCTTCCTTCACGGACTTTCTG 58.582 52.381 0.00 0.00 42.97 3.02
382 388 1.801178 CTTCCTTCACGGACTTTCTGC 59.199 52.381 0.00 0.00 42.97 4.26
383 389 1.048601 TCCTTCACGGACTTTCTGCT 58.951 50.000 0.00 0.00 36.69 4.24
384 390 1.151668 CCTTCACGGACTTTCTGCTG 58.848 55.000 0.00 0.00 33.16 4.41
385 391 1.270305 CCTTCACGGACTTTCTGCTGA 60.270 52.381 0.00 0.00 33.16 4.26
386 392 1.795286 CTTCACGGACTTTCTGCTGAC 59.205 52.381 0.00 0.00 0.00 3.51
387 393 1.040646 TCACGGACTTTCTGCTGACT 58.959 50.000 0.00 0.00 0.00 3.41
388 394 1.412710 TCACGGACTTTCTGCTGACTT 59.587 47.619 0.00 0.00 0.00 3.01
389 395 1.795286 CACGGACTTTCTGCTGACTTC 59.205 52.381 0.00 0.00 0.00 3.01
390 396 1.063806 CGGACTTTCTGCTGACTTCG 58.936 55.000 0.00 0.00 0.00 3.79
391 397 1.603172 CGGACTTTCTGCTGACTTCGT 60.603 52.381 0.00 0.00 0.00 3.85
392 398 2.062519 GGACTTTCTGCTGACTTCGTC 58.937 52.381 0.00 0.00 0.00 4.20
393 399 2.545952 GGACTTTCTGCTGACTTCGTCA 60.546 50.000 0.00 0.00 40.50 4.35
394 400 3.123804 GACTTTCTGCTGACTTCGTCAA 58.876 45.455 0.00 0.00 42.26 3.18
395 401 3.733337 ACTTTCTGCTGACTTCGTCAAT 58.267 40.909 0.00 0.00 42.26 2.57
396 402 4.130118 ACTTTCTGCTGACTTCGTCAATT 58.870 39.130 0.00 0.00 42.26 2.32
397 403 4.024556 ACTTTCTGCTGACTTCGTCAATTG 60.025 41.667 0.00 0.00 42.26 2.32
398 404 1.800586 TCTGCTGACTTCGTCAATTGC 59.199 47.619 0.00 0.00 42.26 3.56
399 405 1.802960 CTGCTGACTTCGTCAATTGCT 59.197 47.619 0.00 0.00 42.26 3.91
400 406 2.221169 TGCTGACTTCGTCAATTGCTT 58.779 42.857 0.00 0.00 42.26 3.91
401 407 2.618241 TGCTGACTTCGTCAATTGCTTT 59.382 40.909 0.00 0.00 42.26 3.51
402 408 3.066621 TGCTGACTTCGTCAATTGCTTTT 59.933 39.130 0.00 0.00 42.26 2.27
403 409 4.044426 GCTGACTTCGTCAATTGCTTTTT 58.956 39.130 0.00 0.00 42.26 1.94
404 410 5.212194 GCTGACTTCGTCAATTGCTTTTTA 58.788 37.500 0.00 0.00 42.26 1.52
405 411 5.858581 GCTGACTTCGTCAATTGCTTTTTAT 59.141 36.000 0.00 0.00 42.26 1.40
406 412 6.032880 GCTGACTTCGTCAATTGCTTTTTATC 59.967 38.462 0.00 0.00 42.26 1.75
407 413 6.077197 TGACTTCGTCAATTGCTTTTTATCG 58.923 36.000 0.00 0.00 39.78 2.92
408 414 4.851558 ACTTCGTCAATTGCTTTTTATCGC 59.148 37.500 0.00 0.00 0.00 4.58
409 415 4.678509 TCGTCAATTGCTTTTTATCGCT 57.321 36.364 0.00 0.00 0.00 4.93
410 416 5.041951 TCGTCAATTGCTTTTTATCGCTT 57.958 34.783 0.00 0.00 0.00 4.68
411 417 6.171932 TCGTCAATTGCTTTTTATCGCTTA 57.828 33.333 0.00 0.00 0.00 3.09
412 418 6.604012 TCGTCAATTGCTTTTTATCGCTTAA 58.396 32.000 0.00 0.00 0.00 1.85
413 419 7.247728 TCGTCAATTGCTTTTTATCGCTTAAT 58.752 30.769 0.00 0.00 0.00 1.40
414 420 8.391859 TCGTCAATTGCTTTTTATCGCTTAATA 58.608 29.630 0.00 0.00 0.00 0.98
415 421 8.673275 CGTCAATTGCTTTTTATCGCTTAATAG 58.327 33.333 0.00 0.00 0.00 1.73
416 422 9.716507 GTCAATTGCTTTTTATCGCTTAATAGA 57.283 29.630 0.00 0.00 0.00 1.98
419 425 9.736023 AATTGCTTTTTATCGCTTAATAGAAGG 57.264 29.630 0.00 0.00 0.00 3.46
420 426 7.259290 TGCTTTTTATCGCTTAATAGAAGGG 57.741 36.000 0.00 0.00 0.00 3.95
421 427 7.051623 TGCTTTTTATCGCTTAATAGAAGGGA 58.948 34.615 6.54 6.54 42.22 4.20
422 428 7.554835 TGCTTTTTATCGCTTAATAGAAGGGAA 59.445 33.333 7.96 0.00 41.52 3.97
423 429 8.568794 GCTTTTTATCGCTTAATAGAAGGGAAT 58.431 33.333 7.96 1.54 41.52 3.01
429 435 8.753497 ATCGCTTAATAGAAGGGAATTTTTCT 57.247 30.769 7.96 6.21 41.52 2.52
430 436 8.209917 TCGCTTAATAGAAGGGAATTTTTCTC 57.790 34.615 1.96 0.00 36.48 2.87
431 437 7.827236 TCGCTTAATAGAAGGGAATTTTTCTCA 59.173 33.333 1.96 0.00 36.48 3.27
432 438 8.125448 CGCTTAATAGAAGGGAATTTTTCTCAG 58.875 37.037 4.65 1.21 35.42 3.35
433 439 9.178758 GCTTAATAGAAGGGAATTTTTCTCAGA 57.821 33.333 4.65 0.00 35.42 3.27
436 442 8.800370 AATAGAAGGGAATTTTTCTCAGAGAC 57.200 34.615 0.00 0.00 35.42 3.36
437 443 6.446909 AGAAGGGAATTTTTCTCAGAGACT 57.553 37.500 0.00 0.00 30.58 3.24
438 444 6.846988 AGAAGGGAATTTTTCTCAGAGACTT 58.153 36.000 0.00 0.00 30.58 3.01
439 445 7.293828 AGAAGGGAATTTTTCTCAGAGACTTT 58.706 34.615 0.00 0.00 30.58 2.66
440 446 7.782168 AGAAGGGAATTTTTCTCAGAGACTTTT 59.218 33.333 0.00 0.00 30.58 2.27
441 447 7.904558 AGGGAATTTTTCTCAGAGACTTTTT 57.095 32.000 0.00 0.00 30.58 1.94
442 448 7.720442 AGGGAATTTTTCTCAGAGACTTTTTG 58.280 34.615 0.00 0.00 30.58 2.44
443 449 7.343057 AGGGAATTTTTCTCAGAGACTTTTTGT 59.657 33.333 0.00 0.00 30.58 2.83
444 450 7.981789 GGGAATTTTTCTCAGAGACTTTTTGTT 59.018 33.333 0.00 0.00 0.00 2.83
445 451 9.025020 GGAATTTTTCTCAGAGACTTTTTGTTC 57.975 33.333 0.00 0.00 0.00 3.18
446 452 9.794685 GAATTTTTCTCAGAGACTTTTTGTTCT 57.205 29.630 0.00 0.00 0.00 3.01
447 453 9.578439 AATTTTTCTCAGAGACTTTTTGTTCTG 57.422 29.630 0.00 0.00 36.29 3.02
448 454 7.687941 TTTTCTCAGAGACTTTTTGTTCTGT 57.312 32.000 0.00 0.00 36.33 3.41
449 455 6.668541 TTCTCAGAGACTTTTTGTTCTGTG 57.331 37.500 0.00 0.00 36.33 3.66
450 456 5.977635 TCTCAGAGACTTTTTGTTCTGTGA 58.022 37.500 0.00 0.00 35.97 3.58
451 457 6.586344 TCTCAGAGACTTTTTGTTCTGTGAT 58.414 36.000 0.00 0.00 34.91 3.06
452 458 6.481313 TCTCAGAGACTTTTTGTTCTGTGATG 59.519 38.462 0.00 0.00 34.91 3.07
453 459 6.115446 TCAGAGACTTTTTGTTCTGTGATGT 58.885 36.000 0.00 0.00 36.33 3.06
454 460 7.272244 TCAGAGACTTTTTGTTCTGTGATGTA 58.728 34.615 0.00 0.00 36.33 2.29
455 461 7.933577 TCAGAGACTTTTTGTTCTGTGATGTAT 59.066 33.333 0.00 0.00 36.33 2.29
456 462 8.562892 CAGAGACTTTTTGTTCTGTGATGTATT 58.437 33.333 0.00 0.00 33.38 1.89
457 463 9.125026 AGAGACTTTTTGTTCTGTGATGTATTT 57.875 29.630 0.00 0.00 0.00 1.40
461 467 9.965824 ACTTTTTGTTCTGTGATGTATTTAAGG 57.034 29.630 0.00 0.00 0.00 2.69
462 468 8.810652 TTTTTGTTCTGTGATGTATTTAAGGC 57.189 30.769 0.00 0.00 0.00 4.35
463 469 7.759489 TTTGTTCTGTGATGTATTTAAGGCT 57.241 32.000 0.00 0.00 0.00 4.58
464 470 6.985188 TGTTCTGTGATGTATTTAAGGCTC 57.015 37.500 0.00 0.00 0.00 4.70
465 471 6.711277 TGTTCTGTGATGTATTTAAGGCTCT 58.289 36.000 0.00 0.00 0.00 4.09
466 472 6.595326 TGTTCTGTGATGTATTTAAGGCTCTG 59.405 38.462 0.00 0.00 0.00 3.35
467 473 6.299805 TCTGTGATGTATTTAAGGCTCTGT 57.700 37.500 0.00 0.00 0.00 3.41
468 474 6.711277 TCTGTGATGTATTTAAGGCTCTGTT 58.289 36.000 0.00 0.00 0.00 3.16
469 475 6.595326 TCTGTGATGTATTTAAGGCTCTGTTG 59.405 38.462 0.00 0.00 0.00 3.33
470 476 6.472016 TGTGATGTATTTAAGGCTCTGTTGA 58.528 36.000 0.00 0.00 0.00 3.18
471 477 7.112122 TGTGATGTATTTAAGGCTCTGTTGAT 58.888 34.615 0.00 0.00 0.00 2.57
472 478 7.280876 TGTGATGTATTTAAGGCTCTGTTGATC 59.719 37.037 0.00 0.00 0.00 2.92
473 479 7.280876 GTGATGTATTTAAGGCTCTGTTGATCA 59.719 37.037 0.00 0.00 0.00 2.92
474 480 7.496920 TGATGTATTTAAGGCTCTGTTGATCAG 59.503 37.037 0.00 0.00 44.85 2.90
475 481 6.711277 TGTATTTAAGGCTCTGTTGATCAGT 58.289 36.000 0.00 0.00 43.97 3.41
476 482 7.168219 TGTATTTAAGGCTCTGTTGATCAGTT 58.832 34.615 0.00 0.00 43.97 3.16
477 483 7.665559 TGTATTTAAGGCTCTGTTGATCAGTTT 59.334 33.333 0.00 0.00 43.97 2.66
478 484 9.162764 GTATTTAAGGCTCTGTTGATCAGTTTA 57.837 33.333 0.00 0.00 43.97 2.01
479 485 7.672983 TTTAAGGCTCTGTTGATCAGTTTAG 57.327 36.000 0.00 0.00 43.97 1.85
480 486 3.604582 AGGCTCTGTTGATCAGTTTAGC 58.395 45.455 11.60 11.60 43.97 3.09
481 487 3.008375 AGGCTCTGTTGATCAGTTTAGCA 59.992 43.478 18.17 4.25 40.81 3.49
482 488 3.753272 GGCTCTGTTGATCAGTTTAGCAA 59.247 43.478 18.17 0.00 40.81 3.91
483 489 4.378874 GGCTCTGTTGATCAGTTTAGCAAC 60.379 45.833 18.17 0.00 44.12 4.17
484 490 4.378874 GCTCTGTTGATCAGTTTAGCAACC 60.379 45.833 13.96 0.00 43.42 3.77
485 491 4.072131 TCTGTTGATCAGTTTAGCAACCC 58.928 43.478 0.00 0.00 43.42 4.11
486 492 4.074970 CTGTTGATCAGTTTAGCAACCCT 58.925 43.478 0.00 0.00 43.42 4.34
487 493 5.012664 TCTGTTGATCAGTTTAGCAACCCTA 59.987 40.000 0.00 0.00 43.42 3.53
488 494 5.245531 TGTTGATCAGTTTAGCAACCCTAG 58.754 41.667 0.00 0.00 43.42 3.02
489 495 5.221843 TGTTGATCAGTTTAGCAACCCTAGT 60.222 40.000 0.00 0.00 43.42 2.57
490 496 5.499004 TGATCAGTTTAGCAACCCTAGTT 57.501 39.130 0.00 0.00 36.33 2.24
491 497 5.876357 TGATCAGTTTAGCAACCCTAGTTT 58.124 37.500 0.00 0.00 32.45 2.66
492 498 7.011499 TGATCAGTTTAGCAACCCTAGTTTA 57.989 36.000 0.00 0.00 32.45 2.01
493 499 7.455058 TGATCAGTTTAGCAACCCTAGTTTAA 58.545 34.615 0.00 0.00 32.45 1.52
494 500 7.606456 TGATCAGTTTAGCAACCCTAGTTTAAG 59.394 37.037 0.00 0.00 32.45 1.85
495 501 6.834107 TCAGTTTAGCAACCCTAGTTTAAGT 58.166 36.000 0.00 0.00 32.45 2.24
496 502 7.965718 TCAGTTTAGCAACCCTAGTTTAAGTA 58.034 34.615 0.00 0.00 32.45 2.24
497 503 7.874528 TCAGTTTAGCAACCCTAGTTTAAGTAC 59.125 37.037 0.00 0.00 32.45 2.73
498 504 7.876582 CAGTTTAGCAACCCTAGTTTAAGTACT 59.123 37.037 0.00 0.00 32.45 2.73
499 505 9.093458 AGTTTAGCAACCCTAGTTTAAGTACTA 57.907 33.333 0.00 0.00 32.45 1.82
500 506 9.363763 GTTTAGCAACCCTAGTTTAAGTACTAG 57.636 37.037 0.00 7.19 44.66 2.57
501 507 5.975282 AGCAACCCTAGTTTAAGTACTAGC 58.025 41.667 8.32 0.12 44.03 3.42
502 508 5.482878 AGCAACCCTAGTTTAAGTACTAGCA 59.517 40.000 8.32 0.00 44.03 3.49
503 509 6.156429 AGCAACCCTAGTTTAAGTACTAGCAT 59.844 38.462 8.32 0.00 44.03 3.79
504 510 6.479331 GCAACCCTAGTTTAAGTACTAGCATC 59.521 42.308 8.32 0.00 44.03 3.91
505 511 6.728089 ACCCTAGTTTAAGTACTAGCATCC 57.272 41.667 8.32 0.00 44.03 3.51
506 512 5.601729 ACCCTAGTTTAAGTACTAGCATCCC 59.398 44.000 8.32 0.00 44.03 3.85
507 513 5.601313 CCCTAGTTTAAGTACTAGCATCCCA 59.399 44.000 8.32 0.00 44.03 4.37
508 514 6.462628 CCCTAGTTTAAGTACTAGCATCCCAC 60.463 46.154 8.32 0.00 44.03 4.61
509 515 5.354842 AGTTTAAGTACTAGCATCCCACC 57.645 43.478 0.00 0.00 0.00 4.61
510 516 4.163649 AGTTTAAGTACTAGCATCCCACCC 59.836 45.833 0.00 0.00 0.00 4.61
511 517 1.508256 AAGTACTAGCATCCCACCCC 58.492 55.000 0.00 0.00 0.00 4.95
512 518 0.341961 AGTACTAGCATCCCACCCCA 59.658 55.000 0.00 0.00 0.00 4.96
513 519 1.209621 GTACTAGCATCCCACCCCAA 58.790 55.000 0.00 0.00 0.00 4.12
514 520 1.134189 GTACTAGCATCCCACCCCAAC 60.134 57.143 0.00 0.00 0.00 3.77
515 521 1.153168 CTAGCATCCCACCCCAACG 60.153 63.158 0.00 0.00 0.00 4.10
516 522 1.910580 CTAGCATCCCACCCCAACGT 61.911 60.000 0.00 0.00 0.00 3.99
517 523 1.493854 TAGCATCCCACCCCAACGTT 61.494 55.000 0.00 0.00 0.00 3.99
518 524 2.340328 GCATCCCACCCCAACGTTC 61.340 63.158 0.00 0.00 0.00 3.95
519 525 1.378762 CATCCCACCCCAACGTTCT 59.621 57.895 0.00 0.00 0.00 3.01
520 526 0.251165 CATCCCACCCCAACGTTCTT 60.251 55.000 0.00 0.00 0.00 2.52
521 527 0.251165 ATCCCACCCCAACGTTCTTG 60.251 55.000 0.00 0.00 0.00 3.02
522 528 1.152839 CCCACCCCAACGTTCTTGT 60.153 57.895 0.00 0.00 0.00 3.16
523 529 0.108963 CCCACCCCAACGTTCTTGTA 59.891 55.000 0.00 0.00 0.00 2.41
524 530 1.232119 CCACCCCAACGTTCTTGTAC 58.768 55.000 0.00 0.00 0.00 2.90
525 531 1.202722 CCACCCCAACGTTCTTGTACT 60.203 52.381 0.00 0.00 0.00 2.73
526 532 2.567985 CACCCCAACGTTCTTGTACTT 58.432 47.619 0.00 0.00 0.00 2.24
527 533 2.546789 CACCCCAACGTTCTTGTACTTC 59.453 50.000 0.00 0.00 0.00 3.01
528 534 2.171027 ACCCCAACGTTCTTGTACTTCA 59.829 45.455 0.00 0.00 0.00 3.02
529 535 3.207778 CCCCAACGTTCTTGTACTTCAA 58.792 45.455 0.00 0.00 34.61 2.69
530 536 3.628487 CCCCAACGTTCTTGTACTTCAAA 59.372 43.478 0.00 0.00 35.48 2.69
531 537 4.096682 CCCCAACGTTCTTGTACTTCAAAA 59.903 41.667 0.00 0.00 35.48 2.44
532 538 5.221165 CCCCAACGTTCTTGTACTTCAAAAT 60.221 40.000 0.00 0.00 35.48 1.82
533 539 6.016943 CCCCAACGTTCTTGTACTTCAAAATA 60.017 38.462 0.00 0.00 35.48 1.40
534 540 6.854381 CCCAACGTTCTTGTACTTCAAAATAC 59.146 38.462 0.00 0.00 35.48 1.89
535 541 7.255001 CCCAACGTTCTTGTACTTCAAAATACT 60.255 37.037 0.00 0.00 35.48 2.12
536 542 7.797123 CCAACGTTCTTGTACTTCAAAATACTC 59.203 37.037 0.00 0.00 35.48 2.59
537 543 8.548721 CAACGTTCTTGTACTTCAAAATACTCT 58.451 33.333 0.00 0.00 35.48 3.24
538 544 8.295569 ACGTTCTTGTACTTCAAAATACTCTC 57.704 34.615 0.00 0.00 35.48 3.20
539 545 7.384387 ACGTTCTTGTACTTCAAAATACTCTCC 59.616 37.037 0.00 0.00 35.48 3.71
540 546 7.148623 CGTTCTTGTACTTCAAAATACTCTCCC 60.149 40.741 0.00 0.00 35.48 4.30
541 547 6.708285 TCTTGTACTTCAAAATACTCTCCCC 58.292 40.000 0.00 0.00 35.48 4.81
542 548 5.080969 TGTACTTCAAAATACTCTCCCCG 57.919 43.478 0.00 0.00 0.00 5.73
543 549 2.987232 ACTTCAAAATACTCTCCCCGC 58.013 47.619 0.00 0.00 0.00 6.13
544 550 2.572104 ACTTCAAAATACTCTCCCCGCT 59.428 45.455 0.00 0.00 0.00 5.52
545 551 3.009143 ACTTCAAAATACTCTCCCCGCTT 59.991 43.478 0.00 0.00 0.00 4.68
546 552 2.985896 TCAAAATACTCTCCCCGCTTG 58.014 47.619 0.00 0.00 0.00 4.01
547 553 1.401905 CAAAATACTCTCCCCGCTTGC 59.598 52.381 0.00 0.00 0.00 4.01
548 554 0.912486 AAATACTCTCCCCGCTTGCT 59.088 50.000 0.00 0.00 0.00 3.91
549 555 0.179000 AATACTCTCCCCGCTTGCTG 59.821 55.000 0.00 0.00 0.00 4.41
550 556 2.317149 ATACTCTCCCCGCTTGCTGC 62.317 60.000 0.00 0.00 38.57 5.25
551 557 4.093291 CTCTCCCCGCTTGCTGCT 62.093 66.667 0.00 0.00 40.11 4.24
552 558 3.618780 CTCTCCCCGCTTGCTGCTT 62.619 63.158 0.00 0.00 40.11 3.91
553 559 3.437795 CTCCCCGCTTGCTGCTTG 61.438 66.667 0.00 0.00 40.11 4.01
557 563 4.112341 CCGCTTGCTGCTTGCCTC 62.112 66.667 0.00 0.00 42.00 4.70
558 564 3.359523 CGCTTGCTGCTTGCCTCA 61.360 61.111 0.00 0.00 42.00 3.86
559 565 2.567049 GCTTGCTGCTTGCCTCAG 59.433 61.111 0.00 0.00 42.00 3.35
564 570 2.350134 CTGCTTGCCTCAGCCAGA 59.650 61.111 0.00 0.00 39.25 3.86
565 571 2.033141 TGCTTGCCTCAGCCAGAC 59.967 61.111 0.00 0.00 39.25 3.51
566 572 2.033141 GCTTGCCTCAGCCAGACA 59.967 61.111 0.00 0.00 38.69 3.41
567 573 1.378250 GCTTGCCTCAGCCAGACAT 60.378 57.895 0.00 0.00 38.69 3.06
568 574 1.654954 GCTTGCCTCAGCCAGACATG 61.655 60.000 0.00 0.00 38.69 3.21
579 585 0.463295 CCAGACATGGCTTCATCGCT 60.463 55.000 0.00 0.00 40.52 4.93
697 703 0.321919 TCTGGAGCCATCTGTGTTGC 60.322 55.000 0.00 0.00 0.00 4.17
761 773 2.030027 TCCTGGTGTGTTCCTCTCAT 57.970 50.000 0.00 0.00 0.00 2.90
833 845 1.899142 CCCATCCACCCGTCAAAATTT 59.101 47.619 0.00 0.00 0.00 1.82
866 878 0.996762 AACCTCCACCAACTTCCCCA 60.997 55.000 0.00 0.00 0.00 4.96
1174 1194 2.047844 CTGTGCCGGTGACCTCTG 60.048 66.667 1.90 0.00 0.00 3.35
1938 1993 4.618927 CGGTTGTCGTATCAAAGAGGGTAA 60.619 45.833 0.00 0.00 0.00 2.85
1944 1999 4.022589 TCGTATCAAAGAGGGTAATAGCCG 60.023 45.833 2.53 0.00 41.56 5.52
2040 2128 1.202417 TGACGGCGATTGAATCTCTCC 60.202 52.381 16.62 1.43 0.00 3.71
2113 2214 1.401905 GACCCGCATTTTTCTAGGCTG 59.598 52.381 0.00 0.00 0.00 4.85
2134 2235 1.597027 ACCACCAAAGAAGCCGTCG 60.597 57.895 0.00 0.00 0.00 5.12
2197 2298 2.225394 TGTCCCTTGCTACCTTCTCTCT 60.225 50.000 0.00 0.00 0.00 3.10
2384 2504 2.135139 GCAATGATTGAGCCGACGATA 58.865 47.619 9.76 0.00 0.00 2.92
2634 2760 7.703058 ATAAACAAATGTACCTCCCTCTTTG 57.297 36.000 0.00 0.00 0.00 2.77
2677 2803 0.393808 ACACGCATGACCCCCATAAC 60.394 55.000 0.00 0.00 33.31 1.89
3279 3442 6.084326 TCCCTGTTCAACTTTAGCATTTTC 57.916 37.500 0.00 0.00 0.00 2.29
3298 3461 5.664294 TTTCATCTGCTATGTGGCAAAAT 57.336 34.783 0.00 0.00 41.94 1.82
3325 3489 5.256474 AGTGCTACATGTAGAGGCAAAATT 58.744 37.500 32.39 10.81 35.21 1.82
3382 3546 6.544038 GCACTTATGAAGCCAAACAAAATT 57.456 33.333 0.00 0.00 0.00 1.82
3523 3691 0.806102 ACGATGAATTCACCTCGCCG 60.806 55.000 24.35 16.37 33.17 6.46
3524 3692 0.806102 CGATGAATTCACCTCGCCGT 60.806 55.000 16.13 0.00 0.00 5.68
3621 3789 8.088365 GCATGAAACTTCAACCCTATACTTTTT 58.912 33.333 0.00 0.00 41.13 1.94
3684 3852 5.338381 CCCTTAGCAGTGTTTCCAATCTAGA 60.338 44.000 0.00 0.00 0.00 2.43
3796 3966 4.497507 CGCTCAAACGGATGTATCTAGACA 60.498 45.833 0.00 0.00 0.00 3.41
4316 4518 4.640690 AGGGCACTGGACTCCGGT 62.641 66.667 3.39 3.39 45.12 5.28
4437 4639 2.641305 GATCAGGCAGCTCTTGATGTT 58.359 47.619 13.00 0.00 31.27 2.71
5572 6721 4.292599 CATCATATTGGTTTGATGCCACG 58.707 43.478 0.46 0.00 41.82 4.94
5648 6806 6.312672 TGAATAAGAACGATGTGTGTGTATGG 59.687 38.462 0.00 0.00 0.00 2.74
5669 6828 3.374058 GGTATATGCTGTGTGTGTCAACC 59.626 47.826 0.00 0.00 0.00 3.77
5895 7062 8.606602 AGAAAAACAAAGTTACGAATACGAACT 58.393 29.630 0.00 0.00 42.66 3.01
5963 7130 3.347216 CAAGGGAGAATACACCCAACTG 58.653 50.000 0.00 0.00 46.96 3.16
6000 7175 5.007332 GGTAATGATAACCGGTGAACATCAC 59.993 44.000 14.73 10.72 46.23 3.06
6075 8771 0.732571 CTACAATCGGGCGCACAAAT 59.267 50.000 11.77 0.00 0.00 2.32
6077 8773 1.583451 CAATCGGGCGCACAAATCG 60.583 57.895 11.77 3.26 0.00 3.34
6101 8797 2.656069 ATACGTTCGGGCAGGCTGT 61.656 57.895 17.16 0.00 0.00 4.40
6113 8809 1.676014 GCAGGCTGTCCGATTACTGTT 60.676 52.381 17.16 0.00 37.47 3.16
6133 8829 4.158764 TGTTTGGTCACGATTTTTCAACCT 59.841 37.500 0.00 0.00 0.00 3.50
6139 8835 5.411669 GGTCACGATTTTTCAACCTAGATGT 59.588 40.000 0.00 0.00 0.00 3.06
6141 8837 6.369065 GTCACGATTTTTCAACCTAGATGTCT 59.631 38.462 0.00 0.00 0.00 3.41
6142 8838 6.934645 TCACGATTTTTCAACCTAGATGTCTT 59.065 34.615 0.00 0.00 0.00 3.01
6143 8839 7.444183 TCACGATTTTTCAACCTAGATGTCTTT 59.556 33.333 0.00 0.00 0.00 2.52
6167 8863 2.035237 AACAGGCCTCAAACGTCCGA 62.035 55.000 0.00 0.00 0.00 4.55
6176 8872 0.318699 CAAACGTCCGAGCTGACTGA 60.319 55.000 0.00 0.00 32.97 3.41
6181 8877 1.228583 TCCGAGCTGACTGACACCT 60.229 57.895 0.00 0.00 0.00 4.00
6182 8878 0.827925 TCCGAGCTGACTGACACCTT 60.828 55.000 0.00 0.00 0.00 3.50
6227 8926 0.908910 TATGGGGCGTCTGAACATGT 59.091 50.000 0.00 0.00 0.00 3.21
6232 8931 1.738099 GCGTCTGAACATGTCCGCT 60.738 57.895 0.00 0.00 38.22 5.52
6234 8933 1.802880 GCGTCTGAACATGTCCGCTAT 60.803 52.381 0.00 0.00 38.22 2.97
6254 8953 3.606662 CGGATCCGACAGCCCGAT 61.607 66.667 30.62 0.00 44.29 4.18
6285 8985 1.462426 TTACACCAATTCCACCCCCT 58.538 50.000 0.00 0.00 0.00 4.79
6312 9012 4.384056 CTGTCGGATCCATTTGCTATCTT 58.616 43.478 13.41 0.00 0.00 2.40
6315 9015 5.059833 GTCGGATCCATTTGCTATCTTCTT 58.940 41.667 13.41 0.00 0.00 2.52
6318 9018 5.762218 CGGATCCATTTGCTATCTTCTTTCT 59.238 40.000 13.41 0.00 0.00 2.52
6319 9019 6.261826 CGGATCCATTTGCTATCTTCTTTCTT 59.738 38.462 13.41 0.00 0.00 2.52
6320 9020 7.201767 CGGATCCATTTGCTATCTTCTTTCTTT 60.202 37.037 13.41 0.00 0.00 2.52
6324 9024 8.306761 TCCATTTGCTATCTTCTTTCTTTTTCC 58.693 33.333 0.00 0.00 0.00 3.13
6338 9041 1.469335 TTTTCCTCCTCCACGTCGCT 61.469 55.000 0.00 0.00 0.00 4.93
6392 9096 2.583593 CGTTCCTAGCCTCTGCGC 60.584 66.667 0.00 0.00 44.33 6.09
6423 9127 2.292521 TGGTAGAGCAATCCACTCTCCT 60.293 50.000 0.00 0.00 43.42 3.69
6426 9130 0.540923 GAGCAATCCACTCTCCTGCT 59.459 55.000 0.00 0.00 45.71 4.24
6442 9146 0.840617 TGCTGTGGTGGAGGTGTTTA 59.159 50.000 0.00 0.00 0.00 2.01
6470 9174 4.466370 TGAGTATCTCGGAGAACCAAATGT 59.534 41.667 12.40 0.00 34.09 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 1.198713 CAGGGACCAGTACTGCATCT 58.801 55.000 17.86 8.60 0.00 2.90
102 103 1.446272 CCTTGTCGCGAAGGAGACC 60.446 63.158 20.03 2.24 44.87 3.85
104 105 1.289066 CACCTTGTCGCGAAGGAGA 59.711 57.895 28.99 5.99 44.87 3.71
105 106 2.383527 GCACCTTGTCGCGAAGGAG 61.384 63.158 28.99 22.83 44.87 3.69
133 138 2.241171 TCGAGCGTTCTGTCGAGAA 58.759 52.632 0.00 0.00 40.19 2.87
159 164 2.945668 AGCAGACAAAAGTCTTGGTGTC 59.054 45.455 16.66 16.66 40.56 3.67
245 250 1.280133 CATCTCCTTCACCTTCCAGCA 59.720 52.381 0.00 0.00 0.00 4.41
257 263 0.998145 AAGAAGCCCTGCATCTCCTT 59.002 50.000 0.00 0.00 35.50 3.36
372 378 2.156343 ACGAAGTCAGCAGAAAGTCC 57.844 50.000 0.00 0.00 29.74 3.85
385 391 5.334879 AGCGATAAAAAGCAATTGACGAAGT 60.335 36.000 10.34 0.00 39.05 3.01
386 392 5.088739 AGCGATAAAAAGCAATTGACGAAG 58.911 37.500 10.34 0.00 35.48 3.79
387 393 5.041951 AGCGATAAAAAGCAATTGACGAA 57.958 34.783 10.34 0.00 35.48 3.85
388 394 4.678509 AGCGATAAAAAGCAATTGACGA 57.321 36.364 10.34 0.00 35.48 4.20
389 395 6.846870 TTAAGCGATAAAAAGCAATTGACG 57.153 33.333 10.34 2.60 35.48 4.35
390 396 9.716507 TCTATTAAGCGATAAAAAGCAATTGAC 57.283 29.630 10.34 0.30 35.48 3.18
393 399 9.736023 CCTTCTATTAAGCGATAAAAAGCAATT 57.264 29.630 0.00 0.00 35.48 2.32
394 400 8.352942 CCCTTCTATTAAGCGATAAAAAGCAAT 58.647 33.333 0.00 0.00 35.48 3.56
395 401 7.554835 TCCCTTCTATTAAGCGATAAAAAGCAA 59.445 33.333 0.00 0.00 35.48 3.91
396 402 7.051623 TCCCTTCTATTAAGCGATAAAAAGCA 58.948 34.615 0.00 0.00 35.48 3.91
397 403 7.492352 TCCCTTCTATTAAGCGATAAAAAGC 57.508 36.000 0.00 0.00 0.00 3.51
403 409 9.847224 AGAAAAATTCCCTTCTATTAAGCGATA 57.153 29.630 0.00 0.00 30.05 2.92
404 410 8.753497 AGAAAAATTCCCTTCTATTAAGCGAT 57.247 30.769 0.00 0.00 30.05 4.58
405 411 7.827236 TGAGAAAAATTCCCTTCTATTAAGCGA 59.173 33.333 0.00 0.00 32.01 4.93
406 412 7.985476 TGAGAAAAATTCCCTTCTATTAAGCG 58.015 34.615 0.00 0.00 32.01 4.68
407 413 9.178758 TCTGAGAAAAATTCCCTTCTATTAAGC 57.821 33.333 0.00 0.00 32.01 3.09
410 416 9.892130 GTCTCTGAGAAAAATTCCCTTCTATTA 57.108 33.333 9.31 0.00 32.01 0.98
411 417 8.610369 AGTCTCTGAGAAAAATTCCCTTCTATT 58.390 33.333 9.31 0.00 32.01 1.73
412 418 8.156822 AGTCTCTGAGAAAAATTCCCTTCTAT 57.843 34.615 9.31 0.00 32.01 1.98
413 419 7.560796 AGTCTCTGAGAAAAATTCCCTTCTA 57.439 36.000 9.31 0.00 32.01 2.10
414 420 6.446909 AGTCTCTGAGAAAAATTCCCTTCT 57.553 37.500 9.31 0.00 34.58 2.85
415 421 7.517614 AAAGTCTCTGAGAAAAATTCCCTTC 57.482 36.000 9.31 0.00 0.00 3.46
416 422 7.904558 AAAAGTCTCTGAGAAAAATTCCCTT 57.095 32.000 9.31 3.22 0.00 3.95
417 423 7.343057 ACAAAAAGTCTCTGAGAAAAATTCCCT 59.657 33.333 9.31 0.00 0.00 4.20
418 424 7.492524 ACAAAAAGTCTCTGAGAAAAATTCCC 58.507 34.615 9.31 0.00 0.00 3.97
419 425 8.932945 AACAAAAAGTCTCTGAGAAAAATTCC 57.067 30.769 9.31 0.00 0.00 3.01
420 426 9.794685 AGAACAAAAAGTCTCTGAGAAAAATTC 57.205 29.630 9.31 7.37 0.00 2.17
421 427 9.578439 CAGAACAAAAAGTCTCTGAGAAAAATT 57.422 29.630 9.31 0.46 37.46 1.82
422 428 8.743714 ACAGAACAAAAAGTCTCTGAGAAAAAT 58.256 29.630 9.31 0.00 38.07 1.82
423 429 8.023128 CACAGAACAAAAAGTCTCTGAGAAAAA 58.977 33.333 9.31 0.00 38.07 1.94
424 430 7.390440 TCACAGAACAAAAAGTCTCTGAGAAAA 59.610 33.333 9.31 0.00 38.07 2.29
425 431 6.878923 TCACAGAACAAAAAGTCTCTGAGAAA 59.121 34.615 9.31 0.00 38.07 2.52
426 432 6.406370 TCACAGAACAAAAAGTCTCTGAGAA 58.594 36.000 9.31 0.00 38.07 2.87
427 433 5.977635 TCACAGAACAAAAAGTCTCTGAGA 58.022 37.500 2.58 2.58 38.07 3.27
428 434 6.259608 ACATCACAGAACAAAAAGTCTCTGAG 59.740 38.462 5.01 0.00 38.07 3.35
429 435 6.115446 ACATCACAGAACAAAAAGTCTCTGA 58.885 36.000 5.01 0.00 38.07 3.27
430 436 6.369059 ACATCACAGAACAAAAAGTCTCTG 57.631 37.500 0.00 0.00 39.33 3.35
431 437 8.682936 AATACATCACAGAACAAAAAGTCTCT 57.317 30.769 0.00 0.00 0.00 3.10
435 441 9.965824 CCTTAAATACATCACAGAACAAAAAGT 57.034 29.630 0.00 0.00 0.00 2.66
436 442 8.915654 GCCTTAAATACATCACAGAACAAAAAG 58.084 33.333 0.00 0.00 0.00 2.27
437 443 8.637986 AGCCTTAAATACATCACAGAACAAAAA 58.362 29.630 0.00 0.00 0.00 1.94
438 444 8.177119 AGCCTTAAATACATCACAGAACAAAA 57.823 30.769 0.00 0.00 0.00 2.44
439 445 7.665559 AGAGCCTTAAATACATCACAGAACAAA 59.334 33.333 0.00 0.00 0.00 2.83
440 446 7.119699 CAGAGCCTTAAATACATCACAGAACAA 59.880 37.037 0.00 0.00 0.00 2.83
441 447 6.595326 CAGAGCCTTAAATACATCACAGAACA 59.405 38.462 0.00 0.00 0.00 3.18
442 448 6.595716 ACAGAGCCTTAAATACATCACAGAAC 59.404 38.462 0.00 0.00 0.00 3.01
443 449 6.711277 ACAGAGCCTTAAATACATCACAGAA 58.289 36.000 0.00 0.00 0.00 3.02
444 450 6.299805 ACAGAGCCTTAAATACATCACAGA 57.700 37.500 0.00 0.00 0.00 3.41
445 451 6.595326 TCAACAGAGCCTTAAATACATCACAG 59.405 38.462 0.00 0.00 0.00 3.66
446 452 6.472016 TCAACAGAGCCTTAAATACATCACA 58.528 36.000 0.00 0.00 0.00 3.58
447 453 6.985188 TCAACAGAGCCTTAAATACATCAC 57.015 37.500 0.00 0.00 0.00 3.06
448 454 7.337938 TGATCAACAGAGCCTTAAATACATCA 58.662 34.615 0.00 0.00 0.00 3.07
449 455 7.792374 TGATCAACAGAGCCTTAAATACATC 57.208 36.000 0.00 0.00 0.00 3.06
464 470 8.438047 AACTAGGGTTGCTAAACTGATCAACAG 61.438 40.741 0.00 0.00 41.95 3.16
465 471 4.098914 AGGGTTGCTAAACTGATCAACA 57.901 40.909 0.00 0.00 40.20 3.33
466 472 5.246307 ACTAGGGTTGCTAAACTGATCAAC 58.754 41.667 0.00 0.00 38.36 3.18
467 473 5.499004 ACTAGGGTTGCTAAACTGATCAA 57.501 39.130 0.00 0.00 36.48 2.57
468 474 5.499004 AACTAGGGTTGCTAAACTGATCA 57.501 39.130 0.00 0.00 36.48 2.92
469 475 7.606839 ACTTAAACTAGGGTTGCTAAACTGATC 59.393 37.037 0.00 0.00 36.48 2.92
470 476 7.459234 ACTTAAACTAGGGTTGCTAAACTGAT 58.541 34.615 0.00 0.00 36.48 2.90
471 477 6.834107 ACTTAAACTAGGGTTGCTAAACTGA 58.166 36.000 0.00 0.00 36.48 3.41
472 478 7.876582 AGTACTTAAACTAGGGTTGCTAAACTG 59.123 37.037 0.00 0.00 36.48 3.16
473 479 7.971201 AGTACTTAAACTAGGGTTGCTAAACT 58.029 34.615 0.00 0.00 36.48 2.66
474 480 9.363763 CTAGTACTTAAACTAGGGTTGCTAAAC 57.636 37.037 0.00 0.00 43.47 2.01
475 481 8.037166 GCTAGTACTTAAACTAGGGTTGCTAAA 58.963 37.037 13.68 0.00 46.05 1.85
476 482 7.178983 TGCTAGTACTTAAACTAGGGTTGCTAA 59.821 37.037 13.68 0.00 46.05 3.09
477 483 6.664816 TGCTAGTACTTAAACTAGGGTTGCTA 59.335 38.462 13.68 0.00 46.05 3.49
478 484 5.482878 TGCTAGTACTTAAACTAGGGTTGCT 59.517 40.000 13.68 0.00 46.05 3.91
479 485 5.727434 TGCTAGTACTTAAACTAGGGTTGC 58.273 41.667 13.68 3.64 46.05 4.17
480 486 6.985059 GGATGCTAGTACTTAAACTAGGGTTG 59.015 42.308 13.68 0.00 46.05 3.77
481 487 6.099413 GGGATGCTAGTACTTAAACTAGGGTT 59.901 42.308 13.68 0.00 46.05 4.11
482 488 5.601729 GGGATGCTAGTACTTAAACTAGGGT 59.398 44.000 13.68 0.00 46.05 4.34
483 489 5.601313 TGGGATGCTAGTACTTAAACTAGGG 59.399 44.000 13.68 0.00 46.05 3.53
484 490 6.462628 GGTGGGATGCTAGTACTTAAACTAGG 60.463 46.154 13.68 0.42 46.05 3.02
486 492 5.364735 GGGTGGGATGCTAGTACTTAAACTA 59.635 44.000 0.00 0.00 0.00 2.24
487 493 4.163649 GGGTGGGATGCTAGTACTTAAACT 59.836 45.833 0.00 0.00 0.00 2.66
488 494 4.449131 GGGTGGGATGCTAGTACTTAAAC 58.551 47.826 0.00 0.00 0.00 2.01
489 495 3.457012 GGGGTGGGATGCTAGTACTTAAA 59.543 47.826 0.00 0.00 0.00 1.52
490 496 3.043418 GGGGTGGGATGCTAGTACTTAA 58.957 50.000 0.00 0.00 0.00 1.85
491 497 2.022820 TGGGGTGGGATGCTAGTACTTA 60.023 50.000 0.00 0.00 0.00 2.24
492 498 1.274184 TGGGGTGGGATGCTAGTACTT 60.274 52.381 0.00 0.00 0.00 2.24
493 499 0.341961 TGGGGTGGGATGCTAGTACT 59.658 55.000 0.00 0.00 0.00 2.73
494 500 1.134189 GTTGGGGTGGGATGCTAGTAC 60.134 57.143 0.00 0.00 0.00 2.73
495 501 1.209621 GTTGGGGTGGGATGCTAGTA 58.790 55.000 0.00 0.00 0.00 1.82
496 502 1.910580 CGTTGGGGTGGGATGCTAGT 61.911 60.000 0.00 0.00 0.00 2.57
497 503 1.153168 CGTTGGGGTGGGATGCTAG 60.153 63.158 0.00 0.00 0.00 3.42
498 504 1.493854 AACGTTGGGGTGGGATGCTA 61.494 55.000 0.00 0.00 0.00 3.49
499 505 2.764637 GAACGTTGGGGTGGGATGCT 62.765 60.000 5.00 0.00 0.00 3.79
500 506 2.282887 AACGTTGGGGTGGGATGC 60.283 61.111 0.00 0.00 0.00 3.91
501 507 0.251165 AAGAACGTTGGGGTGGGATG 60.251 55.000 5.00 0.00 0.00 3.51
502 508 0.251165 CAAGAACGTTGGGGTGGGAT 60.251 55.000 5.00 0.00 0.00 3.85
503 509 1.149627 CAAGAACGTTGGGGTGGGA 59.850 57.895 5.00 0.00 0.00 4.37
504 510 0.108963 TACAAGAACGTTGGGGTGGG 59.891 55.000 5.00 0.00 0.00 4.61
505 511 1.202722 AGTACAAGAACGTTGGGGTGG 60.203 52.381 5.00 0.00 0.00 4.61
506 512 2.249844 AGTACAAGAACGTTGGGGTG 57.750 50.000 5.00 0.22 0.00 4.61
507 513 2.171027 TGAAGTACAAGAACGTTGGGGT 59.829 45.455 5.00 2.83 0.00 4.95
508 514 2.841215 TGAAGTACAAGAACGTTGGGG 58.159 47.619 5.00 0.00 0.00 4.96
509 515 4.886247 TTTGAAGTACAAGAACGTTGGG 57.114 40.909 5.00 0.00 39.77 4.12
510 516 7.636326 AGTATTTTGAAGTACAAGAACGTTGG 58.364 34.615 5.00 0.00 39.77 3.77
511 517 8.548721 AGAGTATTTTGAAGTACAAGAACGTTG 58.451 33.333 5.00 0.00 39.77 4.10
512 518 8.658499 AGAGTATTTTGAAGTACAAGAACGTT 57.342 30.769 0.00 0.00 39.77 3.99
513 519 7.384387 GGAGAGTATTTTGAAGTACAAGAACGT 59.616 37.037 0.00 0.00 39.77 3.99
514 520 7.148623 GGGAGAGTATTTTGAAGTACAAGAACG 60.149 40.741 0.00 0.00 39.77 3.95
515 521 7.119407 GGGGAGAGTATTTTGAAGTACAAGAAC 59.881 40.741 0.00 0.00 39.77 3.01
516 522 7.166167 GGGGAGAGTATTTTGAAGTACAAGAA 58.834 38.462 0.00 0.00 39.77 2.52
517 523 6.573680 CGGGGAGAGTATTTTGAAGTACAAGA 60.574 42.308 0.00 0.00 39.77 3.02
518 524 5.581085 CGGGGAGAGTATTTTGAAGTACAAG 59.419 44.000 0.00 0.00 39.77 3.16
519 525 5.484715 CGGGGAGAGTATTTTGAAGTACAA 58.515 41.667 0.00 0.00 36.65 2.41
520 526 4.622220 GCGGGGAGAGTATTTTGAAGTACA 60.622 45.833 0.00 0.00 0.00 2.90
521 527 3.869832 GCGGGGAGAGTATTTTGAAGTAC 59.130 47.826 0.00 0.00 0.00 2.73
522 528 3.773119 AGCGGGGAGAGTATTTTGAAGTA 59.227 43.478 0.00 0.00 0.00 2.24
523 529 2.572104 AGCGGGGAGAGTATTTTGAAGT 59.428 45.455 0.00 0.00 0.00 3.01
524 530 3.268023 AGCGGGGAGAGTATTTTGAAG 57.732 47.619 0.00 0.00 0.00 3.02
525 531 3.343617 CAAGCGGGGAGAGTATTTTGAA 58.656 45.455 0.00 0.00 0.00 2.69
526 532 2.939640 GCAAGCGGGGAGAGTATTTTGA 60.940 50.000 0.00 0.00 0.00 2.69
527 533 1.401905 GCAAGCGGGGAGAGTATTTTG 59.598 52.381 0.00 0.00 0.00 2.44
528 534 1.282157 AGCAAGCGGGGAGAGTATTTT 59.718 47.619 0.00 0.00 0.00 1.82
529 535 0.912486 AGCAAGCGGGGAGAGTATTT 59.088 50.000 0.00 0.00 0.00 1.40
530 536 0.179000 CAGCAAGCGGGGAGAGTATT 59.821 55.000 0.00 0.00 0.00 1.89
531 537 1.826024 CAGCAAGCGGGGAGAGTAT 59.174 57.895 0.00 0.00 0.00 2.12
532 538 3.019003 GCAGCAAGCGGGGAGAGTA 62.019 63.158 0.00 0.00 0.00 2.59
533 539 4.400961 GCAGCAAGCGGGGAGAGT 62.401 66.667 0.00 0.00 0.00 3.24
547 553 2.039405 GTCTGGCTGAGGCAAGCAG 61.039 63.158 10.72 0.00 45.43 4.24
548 554 2.033141 GTCTGGCTGAGGCAAGCA 59.967 61.111 10.72 0.00 45.43 3.91
549 555 1.378250 ATGTCTGGCTGAGGCAAGC 60.378 57.895 10.72 6.35 40.58 4.01
550 556 1.030488 CCATGTCTGGCTGAGGCAAG 61.030 60.000 10.72 4.70 40.58 4.01
551 557 1.001764 CCATGTCTGGCTGAGGCAA 60.002 57.895 10.72 0.00 40.58 4.52
552 558 2.672908 CCATGTCTGGCTGAGGCA 59.327 61.111 8.86 8.86 41.75 4.75
560 566 0.463295 AGCGATGAAGCCATGTCTGG 60.463 55.000 0.00 0.00 46.17 3.86
561 567 0.935898 GAGCGATGAAGCCATGTCTG 59.064 55.000 0.00 0.00 38.01 3.51
562 568 0.829333 AGAGCGATGAAGCCATGTCT 59.171 50.000 0.00 0.00 38.01 3.41
563 569 1.216122 GAGAGCGATGAAGCCATGTC 58.784 55.000 0.00 0.00 38.01 3.06
564 570 0.529337 CGAGAGCGATGAAGCCATGT 60.529 55.000 0.00 0.00 40.82 3.21
565 571 1.220169 CCGAGAGCGATGAAGCCATG 61.220 60.000 0.00 0.00 40.82 3.66
566 572 1.068753 CCGAGAGCGATGAAGCCAT 59.931 57.895 0.00 0.00 40.82 4.40
567 573 2.496341 CCGAGAGCGATGAAGCCA 59.504 61.111 0.00 0.00 40.82 4.75
568 574 2.279784 CCCGAGAGCGATGAAGCC 60.280 66.667 0.00 0.00 40.82 4.35
569 575 2.279784 CCCCGAGAGCGATGAAGC 60.280 66.667 0.00 0.00 40.82 3.86
570 576 2.279784 GCCCCGAGAGCGATGAAG 60.280 66.667 0.00 0.00 40.82 3.02
697 703 1.980772 CCCCAAAGCAAGCCCTCTG 60.981 63.158 0.00 0.00 0.00 3.35
833 845 5.222568 TGGTGGAGGTTATTTTGGGGAAATA 60.223 40.000 0.00 0.00 38.80 1.40
866 878 0.179092 GCTGGTTAACGCGAGGGTAT 60.179 55.000 15.93 0.00 0.00 2.73
1293 1313 4.409218 TACGCGCACTCCACGTCC 62.409 66.667 5.73 0.00 40.99 4.79
1861 1916 4.884668 TTGAAAGGTGTCCGTCTTAGAT 57.115 40.909 0.00 0.00 0.00 1.98
1930 1985 0.757935 TTCGCCGGCTATTACCCTCT 60.758 55.000 26.68 0.00 0.00 3.69
1938 1993 2.112815 GCTTTGGTTCGCCGGCTAT 61.113 57.895 26.68 0.00 41.18 2.97
1944 1999 3.431725 CCTCCGCTTTGGTTCGCC 61.432 66.667 0.00 0.00 39.52 5.54
1991 2048 8.352942 CAGAATTTACTTTTGAGCTTTAGTGGT 58.647 33.333 0.00 0.00 0.00 4.16
1996 2084 8.575589 TCATGCAGAATTTACTTTTGAGCTTTA 58.424 29.630 0.00 0.00 0.00 1.85
2040 2128 6.636850 GCAATAATTTAACATAGGCTCCAACG 59.363 38.462 0.00 0.00 0.00 4.10
2054 2142 7.466185 CGGTGTTCATAGGACGCAATAATTTAA 60.466 37.037 0.00 0.00 0.00 1.52
2113 2214 2.919494 CGGCTTCTTTGGTGGTGCC 61.919 63.158 0.00 0.00 37.24 5.01
2134 2235 1.301401 TACGCAAGCCTGTGGTCAC 60.301 57.895 0.19 0.00 45.62 3.67
2197 2298 4.756642 CCACTGTATGAGCTGACAGAAAAA 59.243 41.667 21.13 0.00 44.88 1.94
2384 2504 7.996098 TTTTCGAAGAAAACCTATCCTGAAT 57.004 32.000 0.00 0.00 45.90 2.57
2485 2610 3.026630 TGAGCTGAAACCGTAGAACAG 57.973 47.619 0.00 0.00 0.00 3.16
2512 2637 2.306805 TCACCCTGACAATTGATCTGCT 59.693 45.455 13.59 0.00 0.00 4.24
2634 2760 4.365899 ACTTTTCCTCCGTTTTCAACAC 57.634 40.909 0.00 0.00 0.00 3.32
2677 2803 5.760253 GGTTCATCATACTGATACAGTTGGG 59.240 44.000 9.63 1.34 42.59 4.12
3279 3442 7.009815 CACTAAAATTTTGCCACATAGCAGATG 59.990 37.037 13.76 0.00 45.13 2.90
3298 3461 5.414789 TGCCTCTACATGTAGCACTAAAA 57.585 39.130 25.31 7.84 33.32 1.52
3325 3489 6.542821 ACAAGTTCCAAAATATCAGAGACCA 58.457 36.000 0.00 0.00 0.00 4.02
3382 3546 3.410631 TTTCCTCCTTGACAACGCATA 57.589 42.857 0.00 0.00 0.00 3.14
3621 3789 9.457436 GTAGGGTTTTGAAAATGTAGGAATAGA 57.543 33.333 0.00 0.00 0.00 1.98
3642 3810 1.475213 GGGCCTCTTTGATTCGTAGGG 60.475 57.143 0.84 0.00 0.00 3.53
3796 3966 9.486497 CAAACAGATGATCTAGCACTACAATAT 57.514 33.333 0.00 0.00 0.00 1.28
4316 4518 4.265904 TCGAATCACCTGAGCAACTTTA 57.734 40.909 0.00 0.00 0.00 1.85
4437 4639 2.843545 GGGGGCTCCACAGTGAAA 59.156 61.111 4.16 0.00 35.00 2.69
5572 6721 2.185310 ATCACTTCACCCCACTCCGC 62.185 60.000 0.00 0.00 0.00 5.54
5648 6806 4.093408 CAGGTTGACACACACAGCATATAC 59.907 45.833 0.00 0.00 0.00 1.47
5851 7018 9.528489 TGTTTTTCTCCAACTTTATTATAGGCT 57.472 29.630 0.00 0.00 0.00 4.58
5895 7062 4.383118 CGCAAATCTCTCCCTTCCTCTTAA 60.383 45.833 0.00 0.00 0.00 1.85
5963 7130 3.732048 TCATTACCCTGGAGTTTTCCC 57.268 47.619 0.00 0.00 43.33 3.97
5966 7141 5.190677 CGGTTATCATTACCCTGGAGTTTT 58.809 41.667 0.00 0.00 31.75 2.43
6000 7175 2.027385 GCTTGCTATCCTTTTCCCAGG 58.973 52.381 0.00 0.00 34.86 4.45
6007 7182 5.453567 AAAAAGTTCGCTTGCTATCCTTT 57.546 34.783 0.00 0.00 37.53 3.11
6043 7219 4.499188 CCCGATTGTAGATGCTCTTACGAA 60.499 45.833 0.00 0.00 0.00 3.85
6075 8771 3.840594 CCGAACGTATGGGGCCGA 61.841 66.667 0.00 0.00 0.00 5.54
6081 8777 2.895372 GCCTGCCCGAACGTATGG 60.895 66.667 0.00 0.00 0.00 2.74
6095 8791 2.615493 CCAAACAGTAATCGGACAGCCT 60.615 50.000 0.00 0.00 0.00 4.58
6101 8797 2.296752 TCGTGACCAAACAGTAATCGGA 59.703 45.455 0.00 0.00 0.00 4.55
6107 8803 6.259638 GTTGAAAAATCGTGACCAAACAGTA 58.740 36.000 0.00 0.00 0.00 2.74
6113 8809 5.369833 TCTAGGTTGAAAAATCGTGACCAA 58.630 37.500 0.00 0.00 0.00 3.67
6133 8829 4.287067 AGGCCTGTTTGAGAAAGACATCTA 59.713 41.667 3.11 0.00 0.00 1.98
6139 8835 3.576078 TTGAGGCCTGTTTGAGAAAGA 57.424 42.857 12.00 0.00 0.00 2.52
6141 8837 2.357637 CGTTTGAGGCCTGTTTGAGAAA 59.642 45.455 12.00 0.00 0.00 2.52
6142 8838 1.946768 CGTTTGAGGCCTGTTTGAGAA 59.053 47.619 12.00 0.00 0.00 2.87
6143 8839 1.134220 ACGTTTGAGGCCTGTTTGAGA 60.134 47.619 12.00 0.00 0.00 3.27
6176 8872 7.010160 CCATATTTGGGTTGGATATAAGGTGT 58.990 38.462 0.00 0.00 39.56 4.16
6204 8902 0.468226 GTTCAGACGCCCCATATCCA 59.532 55.000 0.00 0.00 0.00 3.41
6241 8940 4.770362 TGGGATCGGGCTGTCGGA 62.770 66.667 0.00 0.00 0.00 4.55
6254 8953 5.591067 GGAATTGGTGTAATTTACGATGGGA 59.409 40.000 2.30 0.00 39.06 4.37
6285 8985 2.158957 GCAAATGGATCCGACAGGTCTA 60.159 50.000 7.39 0.00 39.05 2.59
6312 9012 3.135895 ACGTGGAGGAGGAAAAAGAAAGA 59.864 43.478 0.00 0.00 0.00 2.52
6315 9015 2.547218 CGACGTGGAGGAGGAAAAAGAA 60.547 50.000 0.00 0.00 0.00 2.52
6318 9018 0.601841 GCGACGTGGAGGAGGAAAAA 60.602 55.000 0.11 0.00 0.00 1.94
6319 9019 1.005394 GCGACGTGGAGGAGGAAAA 60.005 57.895 0.11 0.00 0.00 2.29
6320 9020 1.874345 GAGCGACGTGGAGGAGGAAA 61.874 60.000 0.11 0.00 0.00 3.13
6365 9069 2.678934 TAGGAACGGCTGCGGAGT 60.679 61.111 14.45 1.12 0.00 3.85
6374 9078 2.105128 CGCAGAGGCTAGGAACGG 59.895 66.667 0.00 0.00 38.10 4.44
6423 9127 0.840617 TAAACACCTCCACCACAGCA 59.159 50.000 0.00 0.00 0.00 4.41
6426 9130 1.418637 GGTCTAAACACCTCCACCACA 59.581 52.381 0.00 0.00 33.08 4.17
6442 9146 3.547746 GTTCTCCGAGATACTCAGGTCT 58.452 50.000 0.00 0.00 0.00 3.85
6470 9174 1.134521 ACAACTTCTTCGTGTCCTGCA 60.135 47.619 0.00 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.