Multiple sequence alignment - TraesCS3A01G144200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G144200 chr3A 100.000 1945 0 0 576 2520 126034849 126036793 0.000000e+00 3592.0
1 TraesCS3A01G144200 chr3A 100.000 261 0 0 1 261 126034274 126034534 1.360000e-132 483.0
2 TraesCS3A01G144200 chr3A 86.198 384 25 10 1620 1988 126156716 126157086 8.450000e-105 390.0
3 TraesCS3A01G144200 chr3D 92.160 1352 61 15 645 1971 119403655 119404986 0.000000e+00 1868.0
4 TraesCS3A01G144200 chr3D 92.606 284 18 1 2237 2520 438889009 438889289 3.020000e-109 405.0
5 TraesCS3A01G144200 chr3D 90.262 267 20 3 1 261 448442116 448441850 6.670000e-91 344.0
6 TraesCS3A01G144200 chr3D 87.847 288 24 6 1589 1873 119415973 119416252 6.720000e-86 327.0
7 TraesCS3A01G144200 chr3D 82.653 294 23 12 2237 2520 5668937 5669212 4.190000e-58 235.0
8 TraesCS3A01G144200 chr3D 80.000 180 20 2 2003 2182 119417777 119417940 4.400000e-23 119.0
9 TraesCS3A01G144200 chr3D 78.195 133 25 4 2235 2365 388318721 388318851 5.780000e-12 82.4
10 TraesCS3A01G144200 chr3B 94.380 1032 43 9 718 1742 171701083 171702106 0.000000e+00 1570.0
11 TraesCS3A01G144200 chr3B 83.989 356 36 10 1634 1988 171804668 171805003 3.130000e-84 322.0
12 TraesCS3A01G144200 chr3B 81.749 263 28 9 1744 1988 171702168 171702428 4.250000e-48 202.0
13 TraesCS3A01G144200 chr3B 84.080 201 20 1 2235 2435 469650305 469650117 1.540000e-42 183.0
14 TraesCS3A01G144200 chr3B 91.111 90 7 1 2091 2180 171709809 171709897 1.220000e-23 121.0
15 TraesCS3A01G144200 chr3B 89.535 86 9 0 2097 2182 171807824 171807909 2.650000e-20 110.0
16 TraesCS3A01G144200 chr3B 91.429 70 5 1 681 750 171701020 171701088 7.420000e-16 95.3
17 TraesCS3A01G144200 chr5D 93.750 288 15 1 2233 2520 531427216 531427500 1.790000e-116 429.0
18 TraesCS3A01G144200 chr7D 96.316 190 4 1 2237 2426 612689681 612689495 2.430000e-80 309.0
19 TraesCS3A01G144200 chr7D 92.784 97 7 0 2424 2520 612685414 612685318 9.400000e-30 141.0
20 TraesCS3A01G144200 chr6B 90.000 210 17 2 2237 2446 4810668 4810873 4.130000e-68 268.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G144200 chr3A 126034274 126036793 2519 False 2037.500000 3592 100.0000 1 2520 2 chr3A.!!$F2 2519
1 TraesCS3A01G144200 chr3D 119403655 119404986 1331 False 1868.000000 1868 92.1600 645 1971 1 chr3D.!!$F2 1326
2 TraesCS3A01G144200 chr3D 119415973 119417940 1967 False 223.000000 327 83.9235 1589 2182 2 chr3D.!!$F5 593
3 TraesCS3A01G144200 chr3B 171701020 171702428 1408 False 622.433333 1570 89.1860 681 1988 3 chr3B.!!$F2 1307
4 TraesCS3A01G144200 chr3B 171804668 171807909 3241 False 216.000000 322 86.7620 1634 2182 2 chr3B.!!$F3 548

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
758 792 0.035458 CCAGTCCGTTTCTTCAGCCT 59.965 55.0 0.0 0.0 0.0 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2437 6675 0.026674 CTATGTTGCCGTGCACGATG 59.973 55.0 39.1 24.46 43.02 3.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 4.849329 GACGGCCGGTGCTACGAG 62.849 72.222 31.76 0.00 37.74 4.18
38 39 4.063967 CCGGTGCTACGAGCCACA 62.064 66.667 0.00 0.00 41.51 4.17
39 40 2.184322 CGGTGCTACGAGCCACAT 59.816 61.111 0.00 0.00 41.51 3.21
40 41 1.878522 CGGTGCTACGAGCCACATC 60.879 63.158 0.00 0.00 41.51 3.06
42 43 1.878522 GTGCTACGAGCCACATCGG 60.879 63.158 0.91 0.00 46.91 4.18
57 58 2.277692 CGGCGAATGCTGCATGTG 60.278 61.111 17.00 12.52 41.39 3.21
58 59 2.581409 GGCGAATGCTGCATGTGC 60.581 61.111 23.44 23.44 42.25 4.57
59 60 2.581409 GCGAATGCTGCATGTGCC 60.581 61.111 21.87 10.06 41.18 5.01
60 61 2.277692 CGAATGCTGCATGTGCCG 60.278 61.111 17.00 13.14 41.18 5.69
61 62 2.752939 CGAATGCTGCATGTGCCGA 61.753 57.895 17.00 0.00 41.18 5.54
62 63 1.731700 GAATGCTGCATGTGCCGAT 59.268 52.632 17.00 0.00 41.18 4.18
63 64 0.594028 GAATGCTGCATGTGCCGATG 60.594 55.000 17.00 0.00 41.18 3.84
64 65 2.011741 AATGCTGCATGTGCCGATGG 62.012 55.000 17.00 0.00 41.18 3.51
76 77 3.940640 CGATGGCCGGCGACAATG 61.941 66.667 22.54 6.74 33.91 2.82
77 78 3.585990 GATGGCCGGCGACAATGG 61.586 66.667 22.54 0.00 0.00 3.16
78 79 4.108299 ATGGCCGGCGACAATGGA 62.108 61.111 22.54 0.00 0.00 3.41
79 80 3.636929 ATGGCCGGCGACAATGGAA 62.637 57.895 22.54 0.00 0.00 3.53
80 81 2.828549 GGCCGGCGACAATGGAAT 60.829 61.111 22.54 0.00 0.00 3.01
81 82 2.414785 GGCCGGCGACAATGGAATT 61.415 57.895 22.54 0.00 36.63 2.17
92 93 1.941377 AATGGAATTGCTTGGCCTCA 58.059 45.000 3.32 0.00 33.44 3.86
93 94 2.170012 ATGGAATTGCTTGGCCTCAT 57.830 45.000 3.32 0.00 0.00 2.90
94 95 1.477553 TGGAATTGCTTGGCCTCATC 58.522 50.000 3.32 0.00 0.00 2.92
95 96 1.272592 TGGAATTGCTTGGCCTCATCA 60.273 47.619 3.32 0.00 0.00 3.07
96 97 2.037144 GGAATTGCTTGGCCTCATCAT 58.963 47.619 3.32 0.00 0.00 2.45
97 98 2.035576 GGAATTGCTTGGCCTCATCATC 59.964 50.000 3.32 0.00 0.00 2.92
98 99 1.700955 ATTGCTTGGCCTCATCATCC 58.299 50.000 3.32 0.00 0.00 3.51
99 100 0.332293 TTGCTTGGCCTCATCATCCA 59.668 50.000 3.32 0.00 0.00 3.41
100 101 0.106868 TGCTTGGCCTCATCATCCAG 60.107 55.000 3.32 0.00 0.00 3.86
101 102 1.453762 GCTTGGCCTCATCATCCAGC 61.454 60.000 3.32 0.00 0.00 4.85
102 103 0.183014 CTTGGCCTCATCATCCAGCT 59.817 55.000 3.32 0.00 0.00 4.24
103 104 0.182061 TTGGCCTCATCATCCAGCTC 59.818 55.000 3.32 0.00 0.00 4.09
104 105 0.693430 TGGCCTCATCATCCAGCTCT 60.693 55.000 3.32 0.00 0.00 4.09
105 106 0.250381 GGCCTCATCATCCAGCTCTG 60.250 60.000 0.00 0.00 0.00 3.35
114 115 2.202987 CCAGCTCTGGCCGATGAC 60.203 66.667 2.59 0.00 44.73 3.06
115 116 2.584418 CAGCTCTGGCCGATGACG 60.584 66.667 0.00 0.00 39.73 4.35
116 117 4.521062 AGCTCTGGCCGATGACGC 62.521 66.667 0.00 2.86 39.73 5.19
117 118 4.819761 GCTCTGGCCGATGACGCA 62.820 66.667 0.00 0.00 38.29 5.24
118 119 2.584418 CTCTGGCCGATGACGCAG 60.584 66.667 0.00 0.00 38.29 5.18
119 120 4.147449 TCTGGCCGATGACGCAGG 62.147 66.667 0.00 0.00 38.29 4.85
120 121 4.457496 CTGGCCGATGACGCAGGT 62.457 66.667 0.00 0.00 38.29 4.00
121 122 4.758251 TGGCCGATGACGCAGGTG 62.758 66.667 0.00 0.00 38.29 4.00
124 125 4.457496 CCGATGACGCAGGTGGCT 62.457 66.667 0.00 0.00 41.67 4.75
125 126 2.494445 CGATGACGCAGGTGGCTA 59.506 61.111 0.00 0.00 41.67 3.93
126 127 1.589993 CGATGACGCAGGTGGCTAG 60.590 63.158 0.00 0.00 41.67 3.42
127 128 1.884926 GATGACGCAGGTGGCTAGC 60.885 63.158 6.04 6.04 41.67 3.42
128 129 2.303549 GATGACGCAGGTGGCTAGCT 62.304 60.000 15.72 0.00 41.67 3.32
133 134 2.270205 CAGGTGGCTAGCTGTGGG 59.730 66.667 19.99 0.00 45.14 4.61
134 135 3.011517 AGGTGGCTAGCTGTGGGG 61.012 66.667 15.72 0.00 32.40 4.96
135 136 4.115199 GGTGGCTAGCTGTGGGGG 62.115 72.222 15.72 0.00 0.00 5.40
150 151 3.562232 GGGGACGGGTGTGGTGAA 61.562 66.667 0.00 0.00 0.00 3.18
151 152 2.032071 GGGACGGGTGTGGTGAAG 59.968 66.667 0.00 0.00 0.00 3.02
152 153 2.032071 GGACGGGTGTGGTGAAGG 59.968 66.667 0.00 0.00 0.00 3.46
153 154 2.668550 GACGGGTGTGGTGAAGGC 60.669 66.667 0.00 0.00 0.00 4.35
154 155 3.469863 GACGGGTGTGGTGAAGGCA 62.470 63.158 0.00 0.00 0.00 4.75
155 156 2.978010 CGGGTGTGGTGAAGGCAC 60.978 66.667 0.00 0.00 44.39 5.01
156 157 2.194597 GGGTGTGGTGAAGGCACA 59.805 61.111 0.00 0.00 46.96 4.57
157 158 1.454847 GGGTGTGGTGAAGGCACAA 60.455 57.895 0.00 0.00 46.96 3.33
159 160 1.733526 GTGTGGTGAAGGCACAACC 59.266 57.895 0.00 0.00 46.41 3.77
168 169 2.870372 GGCACAACCTGATGCGTC 59.130 61.111 0.00 0.00 43.02 5.19
169 170 2.476051 GCACAACCTGATGCGTCG 59.524 61.111 0.58 0.00 30.97 5.12
170 171 3.027170 GCACAACCTGATGCGTCGG 62.027 63.158 7.86 7.86 30.97 4.79
171 172 1.374125 CACAACCTGATGCGTCGGA 60.374 57.895 16.68 0.00 32.11 4.55
172 173 1.079819 ACAACCTGATGCGTCGGAG 60.080 57.895 16.68 8.77 32.11 4.63
173 174 1.811266 CAACCTGATGCGTCGGAGG 60.811 63.158 16.68 13.07 32.11 4.30
174 175 3.019003 AACCTGATGCGTCGGAGGG 62.019 63.158 16.68 10.33 32.11 4.30
175 176 4.899239 CCTGATGCGTCGGAGGGC 62.899 72.222 16.68 0.00 32.11 5.19
218 219 4.764143 CCAGAGCGGGGGATTTTT 57.236 55.556 0.00 0.00 0.00 1.94
235 236 1.886886 TTTTTCGGAAGGGGAACTCG 58.113 50.000 0.00 0.00 0.00 4.18
236 237 0.604511 TTTTCGGAAGGGGAACTCGC 60.605 55.000 0.00 0.00 0.00 5.03
237 238 1.760479 TTTCGGAAGGGGAACTCGCA 61.760 55.000 0.00 0.00 0.00 5.10
238 239 2.125512 CGGAAGGGGAACTCGCAG 60.126 66.667 0.00 0.00 0.00 5.18
239 240 2.269241 GGAAGGGGAACTCGCAGG 59.731 66.667 0.00 0.00 0.00 4.85
240 241 2.436824 GAAGGGGAACTCGCAGGC 60.437 66.667 0.00 0.00 0.00 4.85
241 242 2.930562 AAGGGGAACTCGCAGGCT 60.931 61.111 0.00 0.00 0.00 4.58
242 243 2.860972 GAAGGGGAACTCGCAGGCTC 62.861 65.000 0.00 0.00 0.00 4.70
243 244 4.821589 GGGGAACTCGCAGGCTCG 62.822 72.222 0.00 0.00 0.00 5.03
244 245 4.070552 GGGAACTCGCAGGCTCGT 62.071 66.667 6.32 0.00 0.00 4.18
245 246 2.707849 GGGAACTCGCAGGCTCGTA 61.708 63.158 6.32 0.00 0.00 3.43
246 247 1.226717 GGAACTCGCAGGCTCGTAG 60.227 63.158 6.32 5.68 0.00 3.51
247 248 1.507174 GAACTCGCAGGCTCGTAGT 59.493 57.895 6.32 6.15 0.00 2.73
248 249 0.798771 GAACTCGCAGGCTCGTAGTG 60.799 60.000 6.32 0.00 0.00 2.74
249 250 1.524863 AACTCGCAGGCTCGTAGTGT 61.525 55.000 6.32 1.14 0.00 3.55
250 251 1.213013 CTCGCAGGCTCGTAGTGTT 59.787 57.895 6.32 0.00 0.00 3.32
251 252 1.073216 CTCGCAGGCTCGTAGTGTTG 61.073 60.000 6.32 0.00 0.00 3.33
252 253 2.094659 CGCAGGCTCGTAGTGTTGG 61.095 63.158 0.00 0.00 0.00 3.77
253 254 1.741770 GCAGGCTCGTAGTGTTGGG 60.742 63.158 0.00 0.00 0.00 4.12
254 255 1.972198 CAGGCTCGTAGTGTTGGGA 59.028 57.895 0.00 0.00 0.00 4.37
255 256 0.108615 CAGGCTCGTAGTGTTGGGAG 60.109 60.000 0.00 0.00 0.00 4.30
256 257 0.251653 AGGCTCGTAGTGTTGGGAGA 60.252 55.000 0.00 0.00 0.00 3.71
257 258 0.606604 GGCTCGTAGTGTTGGGAGAA 59.393 55.000 0.00 0.00 0.00 2.87
258 259 1.672145 GGCTCGTAGTGTTGGGAGAAC 60.672 57.143 0.00 0.00 0.00 3.01
259 260 1.978542 CTCGTAGTGTTGGGAGAACG 58.021 55.000 0.00 0.00 0.00 3.95
260 261 1.538512 CTCGTAGTGTTGGGAGAACGA 59.461 52.381 0.00 0.00 37.72 3.85
592 593 2.584608 GGTGGCTGGCATACGACT 59.415 61.111 7.33 0.00 0.00 4.18
593 594 1.815421 GGTGGCTGGCATACGACTG 60.815 63.158 7.33 0.00 0.00 3.51
594 595 2.125147 TGGCTGGCATACGACTGC 60.125 61.111 0.00 5.57 44.11 4.40
600 601 3.693245 GCATACGACTGCCGACTG 58.307 61.111 0.00 0.00 41.76 3.51
601 602 1.878522 GCATACGACTGCCGACTGG 60.879 63.158 0.00 0.00 41.76 4.00
611 612 2.978010 CCGACTGGCCAAAGCGTT 60.978 61.111 7.01 0.00 41.24 4.84
612 613 2.556287 CGACTGGCCAAAGCGTTC 59.444 61.111 7.01 0.00 41.24 3.95
613 614 2.250939 CGACTGGCCAAAGCGTTCA 61.251 57.895 7.01 0.00 41.24 3.18
614 615 1.576421 GACTGGCCAAAGCGTTCAG 59.424 57.895 7.01 0.00 41.24 3.02
642 643 4.227134 CGCGCCTATCACTGCCCT 62.227 66.667 0.00 0.00 0.00 5.19
643 644 2.856628 CGCGCCTATCACTGCCCTA 61.857 63.158 0.00 0.00 0.00 3.53
652 653 6.504398 GCCTATCACTGCCCTAAAATAAAAC 58.496 40.000 0.00 0.00 0.00 2.43
664 665 4.948341 AAAATAAAACAGGGAAGGCGTT 57.052 36.364 0.00 0.00 0.00 4.84
738 772 2.610433 CGCTTGTCTTGTCTGCTCATA 58.390 47.619 0.00 0.00 0.00 2.15
739 773 2.346847 CGCTTGTCTTGTCTGCTCATAC 59.653 50.000 0.00 0.00 0.00 2.39
740 774 2.675348 GCTTGTCTTGTCTGCTCATACC 59.325 50.000 0.00 0.00 0.00 2.73
741 775 3.866066 GCTTGTCTTGTCTGCTCATACCA 60.866 47.826 0.00 0.00 0.00 3.25
742 776 3.599730 TGTCTTGTCTGCTCATACCAG 57.400 47.619 0.00 0.00 0.00 4.00
743 777 2.899900 TGTCTTGTCTGCTCATACCAGT 59.100 45.455 0.00 0.00 0.00 4.00
755 789 4.177026 CTCATACCAGTCCGTTTCTTCAG 58.823 47.826 0.00 0.00 0.00 3.02
756 790 2.450609 TACCAGTCCGTTTCTTCAGC 57.549 50.000 0.00 0.00 0.00 4.26
757 791 0.250338 ACCAGTCCGTTTCTTCAGCC 60.250 55.000 0.00 0.00 0.00 4.85
758 792 0.035458 CCAGTCCGTTTCTTCAGCCT 59.965 55.000 0.00 0.00 0.00 4.58
906 941 1.037493 TATATGCTCGCTGGAACGGT 58.963 50.000 0.00 0.00 36.83 4.83
949 984 1.735920 CACAGCGAGCTCACCTCAC 60.736 63.158 15.40 0.00 40.78 3.51
989 1024 1.214589 CGTGTCCGTTCACCCTAGG 59.785 63.158 0.06 0.06 35.18 3.02
1457 1497 6.374417 AAGTATGCCTAGGTTCTTCTTCAA 57.626 37.500 11.31 0.00 0.00 2.69
1523 1563 3.458189 GTTACGGATGAACCCTGAGATG 58.542 50.000 0.00 0.00 34.64 2.90
1742 1785 7.953158 AAGTACATGCATGCTAGTATGTTAG 57.047 36.000 26.53 12.84 41.14 2.34
1743 1786 7.055667 AGTACATGCATGCTAGTATGTTAGT 57.944 36.000 26.53 16.92 41.14 2.24
1744 1787 8.178313 AGTACATGCATGCTAGTATGTTAGTA 57.822 34.615 26.53 16.11 41.14 1.82
1792 1899 1.030457 CTTCATCAGCTTGGGCATCC 58.970 55.000 0.00 0.00 41.70 3.51
1805 1915 1.153369 GCATCCTCGCCTTGCTACA 60.153 57.895 0.00 0.00 33.61 2.74
1809 1919 1.141881 CCTCGCCTTGCTACATCGT 59.858 57.895 0.00 0.00 0.00 3.73
1815 1925 1.943968 GCCTTGCTACATCGTGTTGGA 60.944 52.381 0.00 0.00 0.00 3.53
1816 1926 2.632377 CCTTGCTACATCGTGTTGGAT 58.368 47.619 0.00 0.00 0.00 3.41
1830 1940 3.023119 TGTTGGATATGTTGCATGGTCC 58.977 45.455 0.00 7.81 0.00 4.46
1835 1946 3.319122 GGATATGTTGCATGGTCCTTTCC 59.681 47.826 0.00 0.00 0.00 3.13
1845 1956 1.422402 TGGTCCTTTCCACCTTGTACC 59.578 52.381 0.00 0.00 34.66 3.34
1865 1976 3.114065 CCGAACCTCTATCGTAGTTTGC 58.886 50.000 0.00 0.00 38.60 3.68
1908 2026 3.340789 GGTCCTTGTTGCGACCAC 58.659 61.111 0.45 0.00 46.59 4.16
1909 2027 1.227853 GGTCCTTGTTGCGACCACT 60.228 57.895 0.45 0.00 46.59 4.00
1922 3430 2.086869 CGACCACTAGTACCTTTCGGA 58.913 52.381 0.00 0.00 0.00 4.55
1926 3434 2.426381 CCACTAGTACCTTTCGGACTCC 59.574 54.545 0.00 0.00 0.00 3.85
1958 3466 2.028385 GGACGACAGCCTTCCTTCTAAA 60.028 50.000 0.00 0.00 30.97 1.85
1994 3504 1.695239 ATCCATGCTCTCCCTGGCA 60.695 57.895 0.00 0.00 42.80 4.92
1999 3509 1.073444 CATGCTCTCCCTGGCATACAT 59.927 52.381 0.00 0.00 45.82 2.29
2001 3511 1.694150 TGCTCTCCCTGGCATACATAC 59.306 52.381 0.00 0.00 33.23 2.39
2005 3547 0.671796 TCCCTGGCATACATACGACG 59.328 55.000 0.00 0.00 0.00 5.12
2014 3556 4.384846 GGCATACATACGACGAATAACCAG 59.615 45.833 0.00 0.00 0.00 4.00
2023 3565 3.680937 CGACGAATAACCAGCCAAACTTA 59.319 43.478 0.00 0.00 0.00 2.24
2031 3573 1.531149 CCAGCCAAACTTACGTGTGAG 59.469 52.381 0.00 0.00 29.31 3.51
2039 3581 1.201647 ACTTACGTGTGAGCATAGCGT 59.798 47.619 0.00 0.00 39.23 5.07
2042 3584 0.038618 ACGTGTGAGCATAGCGTGAA 60.039 50.000 0.00 0.00 34.36 3.18
2049 3592 2.742053 TGAGCATAGCGTGAACCTTTTC 59.258 45.455 0.00 0.00 0.00 2.29
2059 3602 2.018515 TGAACCTTTTCGCTTTTCGGT 58.981 42.857 0.00 0.00 39.05 4.69
2076 6314 5.793030 TTCGGTTCAAATAACCAACCAAT 57.207 34.783 7.62 0.00 39.79 3.16
2078 6316 7.469537 TTCGGTTCAAATAACCAACCAATAT 57.530 32.000 7.62 0.00 39.79 1.28
2079 6317 8.577048 TTCGGTTCAAATAACCAACCAATATA 57.423 30.769 7.62 0.00 39.79 0.86
2081 6319 9.191479 TCGGTTCAAATAACCAACCAATATATT 57.809 29.630 7.62 0.00 39.79 1.28
2114 6352 7.715265 AACGGATACATGTATTTTAGCTCTG 57.285 36.000 19.19 12.56 0.00 3.35
2126 6364 5.900339 TTTTAGCTCTGTAACTGACAACG 57.100 39.130 0.00 0.00 37.70 4.10
2130 6368 0.034337 TCTGTAACTGACAACGCCCC 59.966 55.000 0.00 0.00 37.70 5.80
2168 6406 9.060347 CAAGATATACCAATCAACAGCTACAAT 57.940 33.333 0.00 0.00 0.00 2.71
2182 6420 8.846607 CAACAGCTACAATAATTTAAAACGACC 58.153 33.333 0.00 0.00 0.00 4.79
2183 6421 8.331730 ACAGCTACAATAATTTAAAACGACCT 57.668 30.769 0.00 0.00 0.00 3.85
2184 6422 9.439500 ACAGCTACAATAATTTAAAACGACCTA 57.561 29.630 0.00 0.00 0.00 3.08
2187 6425 9.202545 GCTACAATAATTTAAAACGACCTAACG 57.797 33.333 0.00 0.00 39.31 3.18
2190 6428 8.772705 ACAATAATTTAAAACGACCTAACGACA 58.227 29.630 0.00 0.00 37.03 4.35
2191 6429 9.257865 CAATAATTTAAAACGACCTAACGACAG 57.742 33.333 0.00 0.00 37.03 3.51
2192 6430 8.761575 ATAATTTAAAACGACCTAACGACAGA 57.238 30.769 0.00 0.00 37.03 3.41
2193 6431 5.888412 TTTAAAACGACCTAACGACAGAC 57.112 39.130 0.00 0.00 37.03 3.51
2194 6432 3.722728 AAAACGACCTAACGACAGACT 57.277 42.857 0.00 0.00 37.03 3.24
2195 6433 3.722728 AAACGACCTAACGACAGACTT 57.277 42.857 0.00 0.00 37.03 3.01
2196 6434 2.985406 ACGACCTAACGACAGACTTC 57.015 50.000 0.00 0.00 37.03 3.01
2197 6435 2.224606 ACGACCTAACGACAGACTTCA 58.775 47.619 0.00 0.00 37.03 3.02
2198 6436 2.225963 ACGACCTAACGACAGACTTCAG 59.774 50.000 0.00 0.00 37.03 3.02
2199 6437 2.225963 CGACCTAACGACAGACTTCAGT 59.774 50.000 0.00 0.00 35.09 3.41
2200 6438 3.304525 CGACCTAACGACAGACTTCAGTT 60.305 47.826 0.00 0.00 35.09 3.16
2201 6439 4.228317 GACCTAACGACAGACTTCAGTTC 58.772 47.826 0.00 0.00 0.00 3.01
2202 6440 3.890147 ACCTAACGACAGACTTCAGTTCT 59.110 43.478 0.00 0.00 0.00 3.01
2203 6441 4.023021 ACCTAACGACAGACTTCAGTTCTC 60.023 45.833 0.00 0.00 0.00 2.87
2204 6442 4.216687 CCTAACGACAGACTTCAGTTCTCT 59.783 45.833 0.00 0.00 0.00 3.10
2205 6443 4.657436 AACGACAGACTTCAGTTCTCTT 57.343 40.909 0.00 0.00 0.00 2.85
2206 6444 3.971150 ACGACAGACTTCAGTTCTCTTG 58.029 45.455 0.00 0.00 0.00 3.02
2207 6445 3.632604 ACGACAGACTTCAGTTCTCTTGA 59.367 43.478 0.00 0.00 0.00 3.02
2208 6446 4.098044 ACGACAGACTTCAGTTCTCTTGAA 59.902 41.667 0.00 0.00 0.00 2.69
2209 6447 5.043903 CGACAGACTTCAGTTCTCTTGAAA 58.956 41.667 0.00 0.00 33.52 2.69
2210 6448 5.520288 CGACAGACTTCAGTTCTCTTGAAAA 59.480 40.000 0.00 0.00 33.52 2.29
2211 6449 6.201806 CGACAGACTTCAGTTCTCTTGAAAAT 59.798 38.462 0.00 0.00 33.52 1.82
2212 6450 7.382488 CGACAGACTTCAGTTCTCTTGAAAATA 59.618 37.037 0.00 0.00 33.52 1.40
2213 6451 8.964476 ACAGACTTCAGTTCTCTTGAAAATAA 57.036 30.769 0.00 0.00 33.52 1.40
2214 6452 8.831550 ACAGACTTCAGTTCTCTTGAAAATAAC 58.168 33.333 0.00 0.00 33.52 1.89
2215 6453 9.050601 CAGACTTCAGTTCTCTTGAAAATAACT 57.949 33.333 0.00 0.00 33.52 2.24
2216 6454 9.620259 AGACTTCAGTTCTCTTGAAAATAACTT 57.380 29.630 0.00 0.00 33.52 2.66
2234 6472 9.874215 AAATAACTTTTCAGAGTAAAACGTAGC 57.126 29.630 0.00 0.00 0.00 3.58
2235 6473 6.913873 AACTTTTCAGAGTAAAACGTAGCA 57.086 33.333 0.00 0.00 0.00 3.49
2236 6474 6.913873 ACTTTTCAGAGTAAAACGTAGCAA 57.086 33.333 0.00 0.00 0.00 3.91
2237 6475 7.311364 ACTTTTCAGAGTAAAACGTAGCAAA 57.689 32.000 0.00 0.00 0.00 3.68
2238 6476 7.754625 ACTTTTCAGAGTAAAACGTAGCAAAA 58.245 30.769 0.00 0.00 0.00 2.44
2239 6477 8.238631 ACTTTTCAGAGTAAAACGTAGCAAAAA 58.761 29.630 0.00 0.00 0.00 1.94
2240 6478 9.233232 CTTTTCAGAGTAAAACGTAGCAAAAAT 57.767 29.630 0.00 0.00 0.00 1.82
2241 6479 8.555166 TTTCAGAGTAAAACGTAGCAAAAATG 57.445 30.769 0.00 0.00 0.00 2.32
2242 6480 6.140110 TCAGAGTAAAACGTAGCAAAAATGC 58.860 36.000 0.00 0.00 0.00 3.56
2244 6482 6.303259 CAGAGTAAAACGTAGCAAAAATGCTC 59.697 38.462 6.59 0.00 45.00 4.26
2245 6483 6.204882 AGAGTAAAACGTAGCAAAAATGCTCT 59.795 34.615 6.59 0.00 45.00 4.09
2246 6484 6.735130 AGTAAAACGTAGCAAAAATGCTCTT 58.265 32.000 6.59 0.00 45.00 2.85
2247 6485 7.200455 AGTAAAACGTAGCAAAAATGCTCTTT 58.800 30.769 6.59 6.10 45.00 2.52
2248 6486 5.888412 AAACGTAGCAAAAATGCTCTTTG 57.112 34.783 6.59 0.00 45.00 2.77
2249 6487 3.900941 ACGTAGCAAAAATGCTCTTTGG 58.099 40.909 6.59 0.00 45.00 3.28
2250 6488 3.568007 ACGTAGCAAAAATGCTCTTTGGA 59.432 39.130 6.59 0.00 45.00 3.53
2251 6489 4.161333 CGTAGCAAAAATGCTCTTTGGAG 58.839 43.478 6.59 0.00 45.00 3.86
2252 6490 3.672767 AGCAAAAATGCTCTTTGGAGG 57.327 42.857 0.00 0.00 42.12 4.30
2253 6491 2.071540 GCAAAAATGCTCTTTGGAGGC 58.928 47.619 7.52 0.00 39.80 4.70
2254 6492 2.691927 CAAAAATGCTCTTTGGAGGCC 58.308 47.619 0.00 0.00 39.80 5.19
2255 6493 0.890683 AAAATGCTCTTTGGAGGCCG 59.109 50.000 0.00 0.00 39.80 6.13
2256 6494 0.038166 AAATGCTCTTTGGAGGCCGA 59.962 50.000 0.00 0.00 39.80 5.54
2257 6495 0.393537 AATGCTCTTTGGAGGCCGAG 60.394 55.000 0.00 0.00 39.80 4.63
2258 6496 2.821810 GCTCTTTGGAGGCCGAGC 60.822 66.667 11.57 11.57 41.60 5.03
2259 6497 2.665000 CTCTTTGGAGGCCGAGCA 59.335 61.111 0.00 0.00 36.03 4.26
2260 6498 1.743252 CTCTTTGGAGGCCGAGCAC 60.743 63.158 0.00 0.00 36.03 4.40
2261 6499 2.747855 CTTTGGAGGCCGAGCACC 60.748 66.667 0.00 0.00 0.00 5.01
2262 6500 3.551496 CTTTGGAGGCCGAGCACCA 62.551 63.158 0.00 0.47 35.58 4.17
2263 6501 2.826777 CTTTGGAGGCCGAGCACCAT 62.827 60.000 0.00 0.00 36.73 3.55
2264 6502 3.626996 TTGGAGGCCGAGCACCATG 62.627 63.158 0.00 0.00 36.73 3.66
2265 6503 4.864334 GGAGGCCGAGCACCATGG 62.864 72.222 11.19 11.19 0.00 3.66
2266 6504 4.864334 GAGGCCGAGCACCATGGG 62.864 72.222 18.09 6.26 0.00 4.00
2274 6512 4.175337 GCACCATGGGGCTCGCTA 62.175 66.667 32.34 0.00 37.90 4.26
2275 6513 2.831770 CACCATGGGGCTCGCTAT 59.168 61.111 18.09 0.00 37.90 2.97
2276 6514 1.302033 CACCATGGGGCTCGCTATC 60.302 63.158 18.09 0.00 37.90 2.08
2277 6515 1.766059 ACCATGGGGCTCGCTATCA 60.766 57.895 18.09 0.00 37.90 2.15
2278 6516 1.130054 ACCATGGGGCTCGCTATCAT 61.130 55.000 18.09 0.00 37.90 2.45
2279 6517 0.675837 CCATGGGGCTCGCTATCATG 60.676 60.000 2.85 0.00 36.08 3.07
2280 6518 0.675837 CATGGGGCTCGCTATCATGG 60.676 60.000 0.00 0.00 33.60 3.66
2281 6519 1.845627 ATGGGGCTCGCTATCATGGG 61.846 60.000 0.00 0.00 0.00 4.00
2282 6520 2.359230 GGGCTCGCTATCATGGGC 60.359 66.667 0.00 0.00 0.00 5.36
2287 6525 2.734723 CGCTATCATGGGCGTCGG 60.735 66.667 16.25 0.00 45.34 4.79
2288 6526 2.421739 GCTATCATGGGCGTCGGT 59.578 61.111 0.00 0.00 0.00 4.69
2289 6527 1.664965 GCTATCATGGGCGTCGGTC 60.665 63.158 0.00 0.00 0.00 4.79
2290 6528 2.041976 CTATCATGGGCGTCGGTCT 58.958 57.895 0.00 0.00 0.00 3.85
2291 6529 0.389391 CTATCATGGGCGTCGGTCTT 59.611 55.000 0.00 0.00 0.00 3.01
2292 6530 0.387929 TATCATGGGCGTCGGTCTTC 59.612 55.000 0.00 0.00 0.00 2.87
2293 6531 1.613317 ATCATGGGCGTCGGTCTTCA 61.613 55.000 0.00 0.00 0.00 3.02
2294 6532 2.100631 CATGGGCGTCGGTCTTCAC 61.101 63.158 0.00 0.00 0.00 3.18
2295 6533 2.579657 ATGGGCGTCGGTCTTCACA 61.580 57.895 0.00 0.00 0.00 3.58
2296 6534 1.899437 ATGGGCGTCGGTCTTCACAT 61.899 55.000 0.00 0.00 0.00 3.21
2297 6535 2.100631 GGGCGTCGGTCTTCACATG 61.101 63.158 0.00 0.00 0.00 3.21
2298 6536 2.100631 GGCGTCGGTCTTCACATGG 61.101 63.158 0.00 0.00 0.00 3.66
2299 6537 1.080093 GCGTCGGTCTTCACATGGA 60.080 57.895 0.00 0.00 0.00 3.41
2300 6538 0.460284 GCGTCGGTCTTCACATGGAT 60.460 55.000 0.00 0.00 0.00 3.41
2301 6539 1.560923 CGTCGGTCTTCACATGGATC 58.439 55.000 0.00 0.00 0.00 3.36
2302 6540 1.135112 CGTCGGTCTTCACATGGATCA 60.135 52.381 0.00 0.00 0.00 2.92
2303 6541 2.544685 GTCGGTCTTCACATGGATCAG 58.455 52.381 0.00 0.00 0.00 2.90
2304 6542 2.166459 GTCGGTCTTCACATGGATCAGA 59.834 50.000 0.00 0.00 0.00 3.27
2305 6543 2.166459 TCGGTCTTCACATGGATCAGAC 59.834 50.000 0.00 3.00 34.31 3.51
2306 6544 2.544685 GGTCTTCACATGGATCAGACG 58.455 52.381 0.00 0.00 35.65 4.18
2307 6545 1.929836 GTCTTCACATGGATCAGACGC 59.070 52.381 0.00 0.00 0.00 5.19
2308 6546 1.550072 TCTTCACATGGATCAGACGCA 59.450 47.619 0.00 0.00 0.00 5.24
2309 6547 1.931841 CTTCACATGGATCAGACGCAG 59.068 52.381 0.00 0.00 0.00 5.18
2310 6548 0.460811 TCACATGGATCAGACGCAGC 60.461 55.000 0.00 0.00 0.00 5.25
2311 6549 0.461516 CACATGGATCAGACGCAGCT 60.462 55.000 0.00 0.00 0.00 4.24
2312 6550 0.251354 ACATGGATCAGACGCAGCTT 59.749 50.000 0.00 0.00 0.00 3.74
2313 6551 0.935898 CATGGATCAGACGCAGCTTC 59.064 55.000 0.00 0.00 0.00 3.86
2314 6552 0.529337 ATGGATCAGACGCAGCTTCG 60.529 55.000 3.63 3.63 0.00 3.79
2315 6553 1.153745 GGATCAGACGCAGCTTCGT 60.154 57.895 12.19 12.19 46.38 3.85
2316 6554 0.100682 GGATCAGACGCAGCTTCGTA 59.899 55.000 12.34 0.00 43.42 3.43
2317 6555 1.192793 GATCAGACGCAGCTTCGTAC 58.807 55.000 12.34 5.84 43.42 3.67
2318 6556 0.811915 ATCAGACGCAGCTTCGTACT 59.188 50.000 12.34 8.13 43.42 2.73
2319 6557 0.596577 TCAGACGCAGCTTCGTACTT 59.403 50.000 12.34 0.00 43.42 2.24
2320 6558 0.710567 CAGACGCAGCTTCGTACTTG 59.289 55.000 12.34 7.23 43.42 3.16
2321 6559 0.314302 AGACGCAGCTTCGTACTTGT 59.686 50.000 12.34 0.00 43.42 3.16
2322 6560 0.708918 GACGCAGCTTCGTACTTGTC 59.291 55.000 12.34 0.00 43.42 3.18
2323 6561 0.314302 ACGCAGCTTCGTACTTGTCT 59.686 50.000 10.37 0.00 41.36 3.41
2324 6562 0.985549 CGCAGCTTCGTACTTGTCTC 59.014 55.000 0.00 0.00 0.00 3.36
2325 6563 1.666023 CGCAGCTTCGTACTTGTCTCA 60.666 52.381 0.00 0.00 0.00 3.27
2326 6564 2.611518 GCAGCTTCGTACTTGTCTCAT 58.388 47.619 0.00 0.00 0.00 2.90
2327 6565 2.346847 GCAGCTTCGTACTTGTCTCATG 59.653 50.000 0.00 0.00 0.00 3.07
2328 6566 3.579709 CAGCTTCGTACTTGTCTCATGT 58.420 45.455 0.00 0.00 0.00 3.21
2329 6567 4.733850 CAGCTTCGTACTTGTCTCATGTA 58.266 43.478 0.00 0.00 0.00 2.29
2330 6568 5.344066 CAGCTTCGTACTTGTCTCATGTAT 58.656 41.667 0.00 0.00 0.00 2.29
2331 6569 5.807520 CAGCTTCGTACTTGTCTCATGTATT 59.192 40.000 0.00 0.00 0.00 1.89
2332 6570 6.020281 CAGCTTCGTACTTGTCTCATGTATTC 60.020 42.308 0.00 0.00 0.00 1.75
2333 6571 5.232414 GCTTCGTACTTGTCTCATGTATTCC 59.768 44.000 0.00 0.00 0.00 3.01
2334 6572 5.907866 TCGTACTTGTCTCATGTATTCCA 57.092 39.130 0.00 0.00 0.00 3.53
2335 6573 5.647589 TCGTACTTGTCTCATGTATTCCAC 58.352 41.667 0.00 0.00 0.00 4.02
2336 6574 4.804139 CGTACTTGTCTCATGTATTCCACC 59.196 45.833 0.00 0.00 0.00 4.61
2337 6575 4.222124 ACTTGTCTCATGTATTCCACCC 57.778 45.455 0.00 0.00 0.00 4.61
2338 6576 2.979814 TGTCTCATGTATTCCACCCG 57.020 50.000 0.00 0.00 0.00 5.28
2339 6577 1.134521 TGTCTCATGTATTCCACCCGC 60.135 52.381 0.00 0.00 0.00 6.13
2340 6578 0.468226 TCTCATGTATTCCACCCGCC 59.532 55.000 0.00 0.00 0.00 6.13
2341 6579 0.180171 CTCATGTATTCCACCCGCCA 59.820 55.000 0.00 0.00 0.00 5.69
2342 6580 0.180171 TCATGTATTCCACCCGCCAG 59.820 55.000 0.00 0.00 0.00 4.85
2343 6581 0.819259 CATGTATTCCACCCGCCAGG 60.819 60.000 0.00 0.00 43.78 4.45
2344 6582 2.516225 GTATTCCACCCGCCAGGC 60.516 66.667 0.00 0.00 40.58 4.85
2345 6583 2.690881 TATTCCACCCGCCAGGCT 60.691 61.111 10.54 0.00 40.58 4.58
2346 6584 2.305607 TATTCCACCCGCCAGGCTT 61.306 57.895 10.54 0.00 40.58 4.35
2347 6585 1.858739 TATTCCACCCGCCAGGCTTT 61.859 55.000 10.54 0.00 40.58 3.51
2348 6586 2.730129 ATTCCACCCGCCAGGCTTTT 62.730 55.000 10.54 0.00 40.58 2.27
2349 6587 2.034999 CCACCCGCCAGGCTTTTA 59.965 61.111 10.54 0.00 40.58 1.52
2350 6588 2.340328 CCACCCGCCAGGCTTTTAC 61.340 63.158 10.54 0.00 40.58 2.01
2351 6589 1.602323 CACCCGCCAGGCTTTTACA 60.602 57.895 10.54 0.00 40.58 2.41
2352 6590 1.602605 ACCCGCCAGGCTTTTACAC 60.603 57.895 10.54 0.00 40.58 2.90
2353 6591 2.340328 CCCGCCAGGCTTTTACACC 61.340 63.158 10.54 0.00 35.76 4.16
2354 6592 2.686816 CCGCCAGGCTTTTACACCG 61.687 63.158 10.54 0.00 0.00 4.94
2355 6593 2.566529 GCCAGGCTTTTACACCGC 59.433 61.111 3.29 0.00 0.00 5.68
2356 6594 2.265182 GCCAGGCTTTTACACCGCA 61.265 57.895 3.29 0.00 0.00 5.69
2357 6595 1.579429 CCAGGCTTTTACACCGCAC 59.421 57.895 0.00 0.00 0.00 5.34
2358 6596 1.579429 CAGGCTTTTACACCGCACC 59.421 57.895 0.00 0.00 0.00 5.01
2359 6597 1.964373 AGGCTTTTACACCGCACCG 60.964 57.895 0.00 0.00 0.00 4.94
2360 6598 2.255881 GGCTTTTACACCGCACCGT 61.256 57.895 0.00 0.00 0.00 4.83
2361 6599 0.950071 GGCTTTTACACCGCACCGTA 60.950 55.000 0.00 0.00 0.00 4.02
2362 6600 1.081094 GCTTTTACACCGCACCGTAT 58.919 50.000 0.00 0.00 0.00 3.06
2363 6601 1.465777 GCTTTTACACCGCACCGTATT 59.534 47.619 0.00 0.00 0.00 1.89
2364 6602 2.475022 GCTTTTACACCGCACCGTATTC 60.475 50.000 0.00 0.00 0.00 1.75
2365 6603 1.724429 TTTACACCGCACCGTATTCC 58.276 50.000 0.00 0.00 0.00 3.01
2366 6604 0.108233 TTACACCGCACCGTATTCCC 60.108 55.000 0.00 0.00 0.00 3.97
2367 6605 1.256361 TACACCGCACCGTATTCCCA 61.256 55.000 0.00 0.00 0.00 4.37
2368 6606 1.153249 CACCGCACCGTATTCCCAT 60.153 57.895 0.00 0.00 0.00 4.00
2369 6607 0.746563 CACCGCACCGTATTCCCATT 60.747 55.000 0.00 0.00 0.00 3.16
2370 6608 0.034863 ACCGCACCGTATTCCCATTT 60.035 50.000 0.00 0.00 0.00 2.32
2371 6609 1.209990 ACCGCACCGTATTCCCATTTA 59.790 47.619 0.00 0.00 0.00 1.40
2372 6610 2.158726 ACCGCACCGTATTCCCATTTAT 60.159 45.455 0.00 0.00 0.00 1.40
2373 6611 2.882137 CCGCACCGTATTCCCATTTATT 59.118 45.455 0.00 0.00 0.00 1.40
2374 6612 4.066490 CCGCACCGTATTCCCATTTATTA 58.934 43.478 0.00 0.00 0.00 0.98
2375 6613 4.698304 CCGCACCGTATTCCCATTTATTAT 59.302 41.667 0.00 0.00 0.00 1.28
2376 6614 5.391523 CCGCACCGTATTCCCATTTATTATG 60.392 44.000 0.00 0.00 0.00 1.90
2377 6615 5.399013 GCACCGTATTCCCATTTATTATGC 58.601 41.667 0.00 0.00 0.00 3.14
2378 6616 5.048364 GCACCGTATTCCCATTTATTATGCA 60.048 40.000 0.00 0.00 0.00 3.96
2379 6617 6.378582 CACCGTATTCCCATTTATTATGCAC 58.621 40.000 0.00 0.00 0.00 4.57
2380 6618 6.016693 CACCGTATTCCCATTTATTATGCACA 60.017 38.462 0.00 0.00 0.00 4.57
2381 6619 6.206634 ACCGTATTCCCATTTATTATGCACAG 59.793 38.462 0.00 0.00 0.00 3.66
2382 6620 6.206634 CCGTATTCCCATTTATTATGCACAGT 59.793 38.462 0.00 0.00 0.00 3.55
2383 6621 7.077605 CGTATTCCCATTTATTATGCACAGTG 58.922 38.462 0.00 0.00 0.00 3.66
2384 6622 5.850557 TTCCCATTTATTATGCACAGTGG 57.149 39.130 1.84 0.00 0.00 4.00
2385 6623 3.636300 TCCCATTTATTATGCACAGTGGC 59.364 43.478 1.84 0.00 0.00 5.01
2392 6630 2.203379 TGCACAGTGGCAGCACAT 60.203 55.556 1.84 0.00 39.25 3.21
2393 6631 2.257371 GCACAGTGGCAGCACATG 59.743 61.111 1.84 0.00 0.00 3.21
2394 6632 2.558286 GCACAGTGGCAGCACATGT 61.558 57.895 1.84 0.00 0.00 3.21
2395 6633 1.236616 GCACAGTGGCAGCACATGTA 61.237 55.000 0.00 0.00 0.00 2.29
2396 6634 1.237533 CACAGTGGCAGCACATGTAA 58.762 50.000 0.00 0.00 0.00 2.41
2397 6635 1.608109 CACAGTGGCAGCACATGTAAA 59.392 47.619 0.00 0.00 0.00 2.01
2398 6636 1.608590 ACAGTGGCAGCACATGTAAAC 59.391 47.619 0.00 0.00 0.00 2.01
2399 6637 1.068333 CAGTGGCAGCACATGTAAACC 60.068 52.381 0.00 0.00 0.00 3.27
2400 6638 0.958091 GTGGCAGCACATGTAAACCA 59.042 50.000 0.00 1.16 0.00 3.67
2401 6639 1.068333 GTGGCAGCACATGTAAACCAG 60.068 52.381 0.00 0.00 0.00 4.00
2402 6640 0.109132 GGCAGCACATGTAAACCAGC 60.109 55.000 0.00 0.00 0.00 4.85
2403 6641 0.454957 GCAGCACATGTAAACCAGCG 60.455 55.000 0.00 0.00 0.00 5.18
2404 6642 0.168788 CAGCACATGTAAACCAGCGG 59.831 55.000 0.00 0.00 0.00 5.52
2405 6643 1.154035 GCACATGTAAACCAGCGGC 60.154 57.895 0.00 0.00 0.00 6.53
2406 6644 1.506262 CACATGTAAACCAGCGGCC 59.494 57.895 0.00 0.00 0.00 6.13
2407 6645 1.074072 ACATGTAAACCAGCGGCCA 59.926 52.632 2.24 0.00 0.00 5.36
2408 6646 0.960364 ACATGTAAACCAGCGGCCAG 60.960 55.000 2.24 0.00 0.00 4.85
2409 6647 0.676466 CATGTAAACCAGCGGCCAGA 60.676 55.000 2.24 0.00 0.00 3.86
2410 6648 0.676782 ATGTAAACCAGCGGCCAGAC 60.677 55.000 2.24 0.00 0.00 3.51
2411 6649 2.038837 GTAAACCAGCGGCCAGACC 61.039 63.158 2.24 0.00 0.00 3.85
2412 6650 2.521451 TAAACCAGCGGCCAGACCA 61.521 57.895 2.24 0.00 39.03 4.02
2413 6651 2.463589 TAAACCAGCGGCCAGACCAG 62.464 60.000 2.24 0.00 39.03 4.00
2422 6660 3.414700 CCAGACCAGCGCACGAAC 61.415 66.667 11.47 0.00 0.00 3.95
2423 6661 2.661537 CAGACCAGCGCACGAACA 60.662 61.111 11.47 0.00 0.00 3.18
2424 6662 2.108157 AGACCAGCGCACGAACAA 59.892 55.556 11.47 0.00 0.00 2.83
2425 6663 1.956170 AGACCAGCGCACGAACAAG 60.956 57.895 11.47 0.00 0.00 3.16
2426 6664 2.203015 ACCAGCGCACGAACAAGT 60.203 55.556 11.47 0.00 0.00 3.16
2427 6665 2.249309 CCAGCGCACGAACAAGTG 59.751 61.111 11.47 0.00 44.47 3.16
2435 6673 2.532531 CACGAACAAGTGCCATCATC 57.467 50.000 0.00 0.00 35.17 2.92
2436 6674 1.078709 ACGAACAAGTGCCATCATCG 58.921 50.000 0.00 0.00 35.16 3.84
2437 6675 0.247814 CGAACAAGTGCCATCATCGC 60.248 55.000 0.00 0.00 0.00 4.58
2438 6676 0.804364 GAACAAGTGCCATCATCGCA 59.196 50.000 0.00 0.00 0.00 5.10
2439 6677 1.402968 GAACAAGTGCCATCATCGCAT 59.597 47.619 0.00 0.00 38.76 4.73
2440 6678 1.019673 ACAAGTGCCATCATCGCATC 58.980 50.000 0.00 0.00 38.76 3.91
2441 6679 0.041576 CAAGTGCCATCATCGCATCG 60.042 55.000 0.00 0.00 38.76 3.84
2442 6680 0.462581 AAGTGCCATCATCGCATCGT 60.463 50.000 0.00 0.00 38.76 3.73
2443 6681 1.156034 AGTGCCATCATCGCATCGTG 61.156 55.000 0.00 0.00 38.76 4.35
2444 6682 2.250485 GCCATCATCGCATCGTGC 59.750 61.111 0.58 0.58 40.69 5.34
2445 6683 2.536673 GCCATCATCGCATCGTGCA 61.537 57.895 9.95 0.00 45.36 4.57
2446 6684 1.277739 CCATCATCGCATCGTGCAC 59.722 57.895 6.82 6.82 45.36 4.57
2447 6685 1.083847 CATCATCGCATCGTGCACG 60.084 57.895 32.76 32.76 45.36 5.34
2448 6686 2.239812 ATCATCGCATCGTGCACGG 61.240 57.895 36.41 23.44 45.36 4.94
2449 6687 4.580044 CATCGCATCGTGCACGGC 62.580 66.667 36.41 30.08 45.36 5.68
2453 6691 4.024143 GCATCGTGCACGGCAACA 62.024 61.111 36.41 19.36 44.26 3.33
2454 6692 2.869646 CATCGTGCACGGCAACAT 59.130 55.556 36.41 20.77 41.47 2.71
2455 6693 1.976478 GCATCGTGCACGGCAACATA 61.976 55.000 36.41 17.82 44.26 2.29
2456 6694 0.026674 CATCGTGCACGGCAACATAG 59.973 55.000 36.41 14.83 41.47 2.23
2457 6695 0.108377 ATCGTGCACGGCAACATAGA 60.108 50.000 36.41 16.29 41.47 1.98
2458 6696 1.011968 TCGTGCACGGCAACATAGAC 61.012 55.000 36.41 0.00 41.47 2.59
2459 6697 1.419922 GTGCACGGCAACATAGACG 59.580 57.895 0.00 0.00 41.47 4.18
2460 6698 1.011968 GTGCACGGCAACATAGACGA 61.012 55.000 0.00 0.00 41.47 4.20
2461 6699 0.319986 TGCACGGCAACATAGACGAA 60.320 50.000 0.00 0.00 34.76 3.85
2462 6700 0.094730 GCACGGCAACATAGACGAAC 59.905 55.000 0.00 0.00 0.00 3.95
2463 6701 1.424403 CACGGCAACATAGACGAACA 58.576 50.000 0.00 0.00 0.00 3.18
2464 6702 1.126113 CACGGCAACATAGACGAACAC 59.874 52.381 0.00 0.00 0.00 3.32
2465 6703 0.365523 CGGCAACATAGACGAACACG 59.634 55.000 0.00 0.00 0.00 4.49
2466 6704 0.719465 GGCAACATAGACGAACACGG 59.281 55.000 0.00 0.00 0.00 4.94
2467 6705 0.719465 GCAACATAGACGAACACGGG 59.281 55.000 0.00 0.00 0.00 5.28
2468 6706 1.938016 GCAACATAGACGAACACGGGT 60.938 52.381 0.00 0.00 0.00 5.28
2469 6707 2.671914 GCAACATAGACGAACACGGGTA 60.672 50.000 0.00 0.00 0.00 3.69
2470 6708 3.176708 CAACATAGACGAACACGGGTAG 58.823 50.000 0.00 0.00 0.00 3.18
2471 6709 1.747355 ACATAGACGAACACGGGTAGG 59.253 52.381 0.00 0.00 0.00 3.18
2472 6710 2.019249 CATAGACGAACACGGGTAGGA 58.981 52.381 0.00 0.00 0.00 2.94
2473 6711 2.425143 TAGACGAACACGGGTAGGAT 57.575 50.000 0.00 0.00 0.00 3.24
2474 6712 1.553706 AGACGAACACGGGTAGGATT 58.446 50.000 0.00 0.00 0.00 3.01
2475 6713 1.475682 AGACGAACACGGGTAGGATTC 59.524 52.381 0.00 0.00 0.00 2.52
2476 6714 1.475682 GACGAACACGGGTAGGATTCT 59.524 52.381 0.00 0.00 0.00 2.40
2477 6715 1.203994 ACGAACACGGGTAGGATTCTG 59.796 52.381 0.00 0.00 0.00 3.02
2478 6716 1.470979 CGAACACGGGTAGGATTCTGG 60.471 57.143 0.00 0.00 0.00 3.86
2479 6717 0.252197 AACACGGGTAGGATTCTGGC 59.748 55.000 0.00 0.00 0.00 4.85
2480 6718 0.907704 ACACGGGTAGGATTCTGGCA 60.908 55.000 0.00 0.00 0.00 4.92
2481 6719 0.179073 CACGGGTAGGATTCTGGCAG 60.179 60.000 8.58 8.58 0.00 4.85
2482 6720 0.325296 ACGGGTAGGATTCTGGCAGA 60.325 55.000 14.43 14.43 0.00 4.26
2483 6721 1.051812 CGGGTAGGATTCTGGCAGAT 58.948 55.000 19.50 8.57 0.00 2.90
2484 6722 1.417890 CGGGTAGGATTCTGGCAGATT 59.582 52.381 19.50 15.17 0.00 2.40
2485 6723 2.808202 CGGGTAGGATTCTGGCAGATTG 60.808 54.545 19.50 0.00 0.00 2.67
2486 6724 2.173569 GGGTAGGATTCTGGCAGATTGT 59.826 50.000 19.50 7.66 0.00 2.71
2487 6725 3.391296 GGGTAGGATTCTGGCAGATTGTA 59.609 47.826 19.50 3.13 0.00 2.41
2488 6726 4.503991 GGGTAGGATTCTGGCAGATTGTAG 60.504 50.000 19.50 0.00 0.00 2.74
2489 6727 3.205784 AGGATTCTGGCAGATTGTAGC 57.794 47.619 19.50 5.78 0.00 3.58
2490 6728 1.869767 GGATTCTGGCAGATTGTAGCG 59.130 52.381 19.50 0.00 0.00 4.26
2491 6729 2.483714 GGATTCTGGCAGATTGTAGCGA 60.484 50.000 19.50 0.15 0.00 4.93
2492 6730 2.010145 TTCTGGCAGATTGTAGCGAC 57.990 50.000 19.50 0.00 0.00 5.19
2493 6731 0.175760 TCTGGCAGATTGTAGCGACC 59.824 55.000 14.43 0.00 0.00 4.79
2494 6732 1.148157 CTGGCAGATTGTAGCGACCG 61.148 60.000 9.42 0.00 0.00 4.79
2495 6733 1.883084 GGCAGATTGTAGCGACCGG 60.883 63.158 0.00 0.00 0.00 5.28
2496 6734 1.153628 GCAGATTGTAGCGACCGGT 60.154 57.895 6.92 6.92 0.00 5.28
2497 6735 0.739813 GCAGATTGTAGCGACCGGTT 60.740 55.000 9.42 0.00 0.00 4.44
2498 6736 1.722011 CAGATTGTAGCGACCGGTTT 58.278 50.000 9.42 0.00 0.00 3.27
2499 6737 2.073816 CAGATTGTAGCGACCGGTTTT 58.926 47.619 9.42 0.00 0.00 2.43
2500 6738 3.255725 CAGATTGTAGCGACCGGTTTTA 58.744 45.455 9.42 0.00 0.00 1.52
2501 6739 3.061697 CAGATTGTAGCGACCGGTTTTAC 59.938 47.826 9.42 12.46 0.00 2.01
2502 6740 2.818130 TTGTAGCGACCGGTTTTACT 57.182 45.000 9.42 6.70 0.00 2.24
2503 6741 2.352503 TGTAGCGACCGGTTTTACTC 57.647 50.000 9.42 0.00 0.00 2.59
2504 6742 1.262882 GTAGCGACCGGTTTTACTCG 58.737 55.000 9.42 7.80 0.00 4.18
2505 6743 2.774126 GCGACCGGTTTTACTCGC 59.226 61.111 18.48 18.48 44.11 5.03
2506 6744 1.735559 GCGACCGGTTTTACTCGCT 60.736 57.895 23.93 0.00 46.28 4.93
2507 6745 1.952266 GCGACCGGTTTTACTCGCTG 61.952 60.000 23.93 2.05 46.28 5.18
2508 6746 0.387622 CGACCGGTTTTACTCGCTGA 60.388 55.000 9.42 0.00 0.00 4.26
2509 6747 1.734707 CGACCGGTTTTACTCGCTGAT 60.735 52.381 9.42 0.00 0.00 2.90
2510 6748 1.659098 GACCGGTTTTACTCGCTGATG 59.341 52.381 9.42 0.00 0.00 3.07
2511 6749 0.373716 CCGGTTTTACTCGCTGATGC 59.626 55.000 0.00 0.00 0.00 3.91
2512 6750 1.075542 CGGTTTTACTCGCTGATGCA 58.924 50.000 0.00 0.00 39.64 3.96
2513 6751 1.665679 CGGTTTTACTCGCTGATGCAT 59.334 47.619 0.00 0.00 39.64 3.96
2514 6752 2.285834 CGGTTTTACTCGCTGATGCATC 60.286 50.000 20.14 20.14 39.64 3.91
2515 6753 2.032178 GGTTTTACTCGCTGATGCATCC 59.968 50.000 23.67 8.49 39.64 3.51
2516 6754 1.953559 TTTACTCGCTGATGCATCCC 58.046 50.000 23.67 13.46 39.64 3.85
2517 6755 0.829990 TTACTCGCTGATGCATCCCA 59.170 50.000 23.67 6.06 39.64 4.37
2518 6756 1.051008 TACTCGCTGATGCATCCCAT 58.949 50.000 23.67 6.27 39.64 4.00
2519 6757 0.534427 ACTCGCTGATGCATCCCATG 60.534 55.000 23.67 11.03 39.64 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 4.849329 CTCGTAGCACCGGCCGTC 62.849 72.222 26.12 12.82 42.56 4.79
21 22 3.371097 ATGTGGCTCGTAGCACCGG 62.371 63.158 0.00 0.00 44.75 5.28
22 23 1.878522 GATGTGGCTCGTAGCACCG 60.879 63.158 8.71 0.00 44.75 4.94
23 24 1.878522 CGATGTGGCTCGTAGCACC 60.879 63.158 8.71 0.44 44.75 5.01
24 25 1.878522 CCGATGTGGCTCGTAGCAC 60.879 63.158 8.71 0.00 44.75 4.40
25 26 2.494445 CCGATGTGGCTCGTAGCA 59.506 61.111 8.71 0.00 44.75 3.49
34 35 2.711311 CAGCATTCGCCGATGTGG 59.289 61.111 0.00 0.00 39.83 4.17
35 36 2.023741 GCAGCATTCGCCGATGTG 59.976 61.111 0.00 0.00 39.83 3.21
36 37 1.820906 ATGCAGCATTCGCCGATGT 60.821 52.632 0.52 0.00 39.83 3.06
37 38 1.370051 CATGCAGCATTCGCCGATG 60.370 57.895 4.69 0.00 39.83 3.84
38 39 1.820906 ACATGCAGCATTCGCCGAT 60.821 52.632 4.69 0.00 39.83 4.18
39 40 2.436469 ACATGCAGCATTCGCCGA 60.436 55.556 4.69 0.00 39.83 5.54
40 41 2.277692 CACATGCAGCATTCGCCG 60.278 61.111 4.69 0.00 39.83 6.46
41 42 2.581409 GCACATGCAGCATTCGCC 60.581 61.111 4.69 0.00 41.59 5.54
42 43 2.581409 GGCACATGCAGCATTCGC 60.581 61.111 4.69 11.13 44.36 4.70
43 44 2.055310 ATCGGCACATGCAGCATTCG 62.055 55.000 4.69 7.89 44.36 3.34
44 45 0.594028 CATCGGCACATGCAGCATTC 60.594 55.000 4.69 0.00 44.36 2.67
45 46 1.435925 CATCGGCACATGCAGCATT 59.564 52.632 4.69 0.00 44.36 3.56
46 47 2.486663 CCATCGGCACATGCAGCAT 61.487 57.895 0.52 0.52 44.36 3.79
47 48 3.135457 CCATCGGCACATGCAGCA 61.135 61.111 12.17 0.00 44.36 4.41
59 60 3.940640 CATTGTCGCCGGCCATCG 61.941 66.667 23.46 6.82 38.88 3.84
60 61 3.585990 CCATTGTCGCCGGCCATC 61.586 66.667 23.46 12.06 0.00 3.51
61 62 2.909457 ATTCCATTGTCGCCGGCCAT 62.909 55.000 23.46 4.92 0.00 4.40
62 63 3.636929 ATTCCATTGTCGCCGGCCA 62.637 57.895 23.46 11.71 0.00 5.36
63 64 2.414785 AATTCCATTGTCGCCGGCC 61.415 57.895 23.46 8.57 0.00 6.13
64 65 1.226660 CAATTCCATTGTCGCCGGC 60.227 57.895 19.07 19.07 35.57 6.13
65 66 1.226660 GCAATTCCATTGTCGCCGG 60.227 57.895 0.00 0.00 42.20 6.13
66 67 0.171007 AAGCAATTCCATTGTCGCCG 59.829 50.000 0.00 0.00 42.20 6.46
67 68 1.632422 CAAGCAATTCCATTGTCGCC 58.368 50.000 0.00 0.00 42.20 5.54
68 69 1.632422 CCAAGCAATTCCATTGTCGC 58.368 50.000 0.00 0.00 42.20 5.19
69 70 1.632422 GCCAAGCAATTCCATTGTCG 58.368 50.000 0.00 0.00 42.20 4.35
70 71 1.551883 AGGCCAAGCAATTCCATTGTC 59.448 47.619 5.01 0.00 42.20 3.18
71 72 1.551883 GAGGCCAAGCAATTCCATTGT 59.448 47.619 5.01 0.00 42.20 2.71
72 73 1.551430 TGAGGCCAAGCAATTCCATTG 59.449 47.619 5.01 0.00 43.06 2.82
73 74 1.941377 TGAGGCCAAGCAATTCCATT 58.059 45.000 5.01 0.00 0.00 3.16
74 75 2.037144 GATGAGGCCAAGCAATTCCAT 58.963 47.619 5.01 0.00 0.00 3.41
75 76 1.272592 TGATGAGGCCAAGCAATTCCA 60.273 47.619 5.01 0.00 0.00 3.53
76 77 1.477553 TGATGAGGCCAAGCAATTCC 58.522 50.000 5.01 0.00 0.00 3.01
77 78 2.035576 GGATGATGAGGCCAAGCAATTC 59.964 50.000 5.01 0.00 0.00 2.17
78 79 2.037144 GGATGATGAGGCCAAGCAATT 58.963 47.619 5.01 0.00 0.00 2.32
79 80 1.063492 TGGATGATGAGGCCAAGCAAT 60.063 47.619 5.01 0.00 0.00 3.56
80 81 0.332293 TGGATGATGAGGCCAAGCAA 59.668 50.000 5.01 0.00 0.00 3.91
81 82 0.106868 CTGGATGATGAGGCCAAGCA 60.107 55.000 5.01 1.15 0.00 3.91
82 83 1.453762 GCTGGATGATGAGGCCAAGC 61.454 60.000 5.01 0.00 0.00 4.01
83 84 0.183014 AGCTGGATGATGAGGCCAAG 59.817 55.000 5.01 0.00 0.00 3.61
84 85 0.182061 GAGCTGGATGATGAGGCCAA 59.818 55.000 5.01 0.00 0.00 4.52
85 86 0.693430 AGAGCTGGATGATGAGGCCA 60.693 55.000 5.01 0.00 0.00 5.36
86 87 0.250381 CAGAGCTGGATGATGAGGCC 60.250 60.000 0.00 0.00 0.00 5.19
87 88 3.309052 CAGAGCTGGATGATGAGGC 57.691 57.895 0.00 0.00 0.00 4.70
99 100 4.521062 GCGTCATCGGCCAGAGCT 62.521 66.667 2.24 0.00 39.73 4.09
100 101 4.819761 TGCGTCATCGGCCAGAGC 62.820 66.667 2.24 1.72 37.56 4.09
101 102 2.584418 CTGCGTCATCGGCCAGAG 60.584 66.667 2.24 0.00 37.56 3.35
102 103 4.147449 CCTGCGTCATCGGCCAGA 62.147 66.667 2.24 0.78 37.56 3.86
103 104 4.457496 ACCTGCGTCATCGGCCAG 62.457 66.667 2.24 0.00 37.56 4.85
104 105 4.758251 CACCTGCGTCATCGGCCA 62.758 66.667 2.24 0.00 37.56 5.36
115 116 2.437359 CCACAGCTAGCCACCTGC 60.437 66.667 12.13 0.00 41.71 4.85
116 117 2.270205 CCCACAGCTAGCCACCTG 59.730 66.667 12.13 5.55 35.26 4.00
117 118 3.011517 CCCCACAGCTAGCCACCT 61.012 66.667 12.13 0.00 0.00 4.00
118 119 4.115199 CCCCCACAGCTAGCCACC 62.115 72.222 12.13 0.00 0.00 4.61
133 134 3.546714 CTTCACCACACCCGTCCCC 62.547 68.421 0.00 0.00 0.00 4.81
134 135 2.032071 CTTCACCACACCCGTCCC 59.968 66.667 0.00 0.00 0.00 4.46
135 136 2.032071 CCTTCACCACACCCGTCC 59.968 66.667 0.00 0.00 0.00 4.79
136 137 2.668550 GCCTTCACCACACCCGTC 60.669 66.667 0.00 0.00 0.00 4.79
137 138 3.484806 TGCCTTCACCACACCCGT 61.485 61.111 0.00 0.00 0.00 5.28
138 139 2.978010 GTGCCTTCACCACACCCG 60.978 66.667 0.00 0.00 37.24 5.28
139 140 1.454847 TTGTGCCTTCACCACACCC 60.455 57.895 0.00 0.00 42.39 4.61
140 141 1.733526 GTTGTGCCTTCACCACACC 59.266 57.895 0.00 0.00 42.39 4.16
141 142 1.733526 GGTTGTGCCTTCACCACAC 59.266 57.895 0.00 0.00 42.39 3.82
142 143 4.251246 GGTTGTGCCTTCACCACA 57.749 55.556 2.81 0.00 42.46 4.17
151 152 2.870372 GACGCATCAGGTTGTGCC 59.130 61.111 0.00 0.00 38.08 5.01
152 153 2.476051 CGACGCATCAGGTTGTGC 59.524 61.111 0.00 0.00 37.97 4.57
153 154 1.354337 CTCCGACGCATCAGGTTGTG 61.354 60.000 0.00 0.00 0.00 3.33
154 155 1.079819 CTCCGACGCATCAGGTTGT 60.080 57.895 0.00 0.00 0.00 3.32
155 156 1.811266 CCTCCGACGCATCAGGTTG 60.811 63.158 0.00 0.00 0.00 3.77
156 157 2.579201 CCTCCGACGCATCAGGTT 59.421 61.111 0.00 0.00 0.00 3.50
157 158 3.461773 CCCTCCGACGCATCAGGT 61.462 66.667 0.00 0.00 0.00 4.00
158 159 4.899239 GCCCTCCGACGCATCAGG 62.899 72.222 0.00 0.00 0.00 3.86
201 202 4.764143 AAAAATCCCCCGCTCTGG 57.236 55.556 0.00 0.00 37.55 3.86
216 217 1.886886 CGAGTTCCCCTTCCGAAAAA 58.113 50.000 0.00 0.00 0.00 1.94
217 218 0.604511 GCGAGTTCCCCTTCCGAAAA 60.605 55.000 0.00 0.00 0.00 2.29
218 219 1.004200 GCGAGTTCCCCTTCCGAAA 60.004 57.895 0.00 0.00 0.00 3.46
219 220 2.167398 CTGCGAGTTCCCCTTCCGAA 62.167 60.000 0.00 0.00 0.00 4.30
220 221 2.602267 TGCGAGTTCCCCTTCCGA 60.602 61.111 0.00 0.00 0.00 4.55
221 222 2.125512 CTGCGAGTTCCCCTTCCG 60.126 66.667 0.00 0.00 0.00 4.30
222 223 2.269241 CCTGCGAGTTCCCCTTCC 59.731 66.667 0.00 0.00 0.00 3.46
223 224 2.436824 GCCTGCGAGTTCCCCTTC 60.437 66.667 0.00 0.00 0.00 3.46
224 225 2.930562 AGCCTGCGAGTTCCCCTT 60.931 61.111 0.00 0.00 0.00 3.95
225 226 3.394836 GAGCCTGCGAGTTCCCCT 61.395 66.667 0.00 0.00 0.00 4.79
226 227 4.821589 CGAGCCTGCGAGTTCCCC 62.822 72.222 0.00 0.00 0.00 4.81
227 228 2.615262 CTACGAGCCTGCGAGTTCCC 62.615 65.000 0.00 0.00 34.83 3.97
228 229 1.226717 CTACGAGCCTGCGAGTTCC 60.227 63.158 0.00 0.00 34.83 3.62
229 230 0.798771 CACTACGAGCCTGCGAGTTC 60.799 60.000 0.00 0.00 34.83 3.01
230 231 1.213013 CACTACGAGCCTGCGAGTT 59.787 57.895 0.00 0.00 34.83 3.01
231 232 1.524863 AACACTACGAGCCTGCGAGT 61.525 55.000 0.00 0.00 34.83 4.18
232 233 1.073216 CAACACTACGAGCCTGCGAG 61.073 60.000 0.00 0.00 34.83 5.03
233 234 1.080772 CAACACTACGAGCCTGCGA 60.081 57.895 0.00 0.00 34.83 5.10
234 235 2.094659 CCAACACTACGAGCCTGCG 61.095 63.158 0.00 0.00 37.29 5.18
235 236 1.741770 CCCAACACTACGAGCCTGC 60.742 63.158 0.00 0.00 0.00 4.85
236 237 0.108615 CTCCCAACACTACGAGCCTG 60.109 60.000 0.00 0.00 0.00 4.85
237 238 0.251653 TCTCCCAACACTACGAGCCT 60.252 55.000 0.00 0.00 0.00 4.58
238 239 0.606604 TTCTCCCAACACTACGAGCC 59.393 55.000 0.00 0.00 0.00 4.70
239 240 1.711206 GTTCTCCCAACACTACGAGC 58.289 55.000 0.00 0.00 0.00 5.03
240 241 1.538512 TCGTTCTCCCAACACTACGAG 59.461 52.381 0.00 0.00 33.65 4.18
241 242 1.608055 TCGTTCTCCCAACACTACGA 58.392 50.000 0.00 0.00 35.89 3.43
575 576 1.815421 CAGTCGTATGCCAGCCACC 60.815 63.158 0.00 0.00 0.00 4.61
576 577 2.464459 GCAGTCGTATGCCAGCCAC 61.464 63.158 3.64 0.00 40.43 5.01
577 578 2.125147 GCAGTCGTATGCCAGCCA 60.125 61.111 3.64 0.00 40.43 4.75
583 584 1.878522 CCAGTCGGCAGTCGTATGC 60.879 63.158 0.00 6.12 45.74 3.14
584 585 4.402192 CCAGTCGGCAGTCGTATG 57.598 61.111 0.00 0.00 40.32 2.39
594 595 2.966309 GAACGCTTTGGCCAGTCGG 61.966 63.158 21.65 10.35 34.44 4.79
595 596 2.175184 CTGAACGCTTTGGCCAGTCG 62.175 60.000 17.89 17.89 34.44 4.18
596 597 1.576421 CTGAACGCTTTGGCCAGTC 59.424 57.895 5.11 0.00 34.44 3.51
597 598 2.555547 GCTGAACGCTTTGGCCAGT 61.556 57.895 5.11 0.00 35.14 4.00
598 599 2.256461 GCTGAACGCTTTGGCCAG 59.744 61.111 5.11 0.00 35.14 4.85
599 600 3.294493 GGCTGAACGCTTTGGCCA 61.294 61.111 0.00 0.00 42.08 5.36
600 601 4.404654 CGGCTGAACGCTTTGGCC 62.405 66.667 0.00 0.00 39.13 5.36
601 602 4.404654 CCGGCTGAACGCTTTGGC 62.405 66.667 0.00 0.00 39.13 4.52
602 603 2.978010 ACCGGCTGAACGCTTTGG 60.978 61.111 0.00 0.00 39.13 3.28
603 604 2.252260 CACCGGCTGAACGCTTTG 59.748 61.111 0.00 0.00 39.13 2.77
604 605 3.660111 GCACCGGCTGAACGCTTT 61.660 61.111 0.00 0.00 39.13 3.51
625 626 2.363711 TTAGGGCAGTGATAGGCGCG 62.364 60.000 0.00 0.00 46.29 6.86
626 627 0.179056 TTTAGGGCAGTGATAGGCGC 60.179 55.000 0.00 0.00 42.61 6.53
627 628 2.325583 TTTTAGGGCAGTGATAGGCG 57.674 50.000 0.00 0.00 0.00 5.52
628 629 6.096282 TGTTTTATTTTAGGGCAGTGATAGGC 59.904 38.462 0.00 0.00 0.00 3.93
629 630 7.201821 CCTGTTTTATTTTAGGGCAGTGATAGG 60.202 40.741 0.00 0.00 0.00 2.57
630 631 7.201821 CCCTGTTTTATTTTAGGGCAGTGATAG 60.202 40.741 0.00 0.00 43.08 2.08
631 632 6.605594 CCCTGTTTTATTTTAGGGCAGTGATA 59.394 38.462 0.00 0.00 43.08 2.15
632 633 5.422012 CCCTGTTTTATTTTAGGGCAGTGAT 59.578 40.000 0.00 0.00 43.08 3.06
633 634 4.770010 CCCTGTTTTATTTTAGGGCAGTGA 59.230 41.667 0.00 0.00 43.08 3.41
634 635 5.072040 CCCTGTTTTATTTTAGGGCAGTG 57.928 43.478 0.00 0.00 43.08 3.66
640 641 4.461431 ACGCCTTCCCTGTTTTATTTTAGG 59.539 41.667 0.00 0.00 0.00 2.69
641 642 5.638596 ACGCCTTCCCTGTTTTATTTTAG 57.361 39.130 0.00 0.00 0.00 1.85
642 643 5.774630 CAACGCCTTCCCTGTTTTATTTTA 58.225 37.500 0.00 0.00 0.00 1.52
643 644 4.627058 CAACGCCTTCCCTGTTTTATTTT 58.373 39.130 0.00 0.00 0.00 1.82
664 665 2.519063 CTTGTGTGGCTGGTGGCA 60.519 61.111 0.00 0.00 46.87 4.92
668 669 1.526917 GCTCACTTGTGTGGCTGGT 60.527 57.895 0.46 0.00 43.94 4.00
738 772 0.250338 GGCTGAAGAAACGGACTGGT 60.250 55.000 0.00 0.00 0.00 4.00
739 773 0.035458 AGGCTGAAGAAACGGACTGG 59.965 55.000 0.00 0.00 32.69 4.00
740 774 1.151668 CAGGCTGAAGAAACGGACTG 58.848 55.000 9.42 0.00 44.34 3.51
741 775 0.603975 GCAGGCTGAAGAAACGGACT 60.604 55.000 20.86 0.00 34.44 3.85
742 776 1.578206 GGCAGGCTGAAGAAACGGAC 61.578 60.000 20.86 0.00 0.00 4.79
743 777 1.302511 GGCAGGCTGAAGAAACGGA 60.303 57.895 20.86 0.00 0.00 4.69
756 790 0.747283 GGAGAGTGCATGAAGGCAGG 60.747 60.000 0.00 0.00 45.96 4.85
757 791 0.747283 GGGAGAGTGCATGAAGGCAG 60.747 60.000 0.00 0.00 45.96 4.85
758 792 1.300963 GGGAGAGTGCATGAAGGCA 59.699 57.895 0.00 0.00 42.53 4.75
906 941 3.311110 GGGTGTCCAGACTCGCCA 61.311 66.667 5.82 0.00 33.46 5.69
989 1024 1.405933 GGATGCCCATTTGTTCTTGGC 60.406 52.381 0.00 0.00 42.49 4.52
1432 1468 6.407202 TGAAGAAGAACCTAGGCATACTTTC 58.593 40.000 9.30 3.96 0.00 2.62
1436 1476 5.582665 CAGTTGAAGAAGAACCTAGGCATAC 59.417 44.000 9.30 0.00 0.00 2.39
1523 1563 1.004918 CGTGTGGTTCTCCAGTCCC 60.005 63.158 0.00 0.00 45.24 4.46
1723 1766 9.045223 TCTTTTACTAACATACTAGCATGCATG 57.955 33.333 22.70 22.70 0.00 4.06
1744 1787 9.744468 AACGTTAATTAAAGATGCAAGTCTTTT 57.256 25.926 17.93 5.86 43.90 2.27
1792 1899 0.458543 ACACGATGTAGCAAGGCGAG 60.459 55.000 0.00 0.00 0.00 5.03
1805 1915 3.316029 CCATGCAACATATCCAACACGAT 59.684 43.478 0.00 0.00 0.00 3.73
1809 1919 3.023119 GGACCATGCAACATATCCAACA 58.977 45.455 0.00 0.00 0.00 3.33
1815 1925 3.701040 GTGGAAAGGACCATGCAACATAT 59.299 43.478 0.00 0.00 42.17 1.78
1816 1926 3.088532 GTGGAAAGGACCATGCAACATA 58.911 45.455 0.00 0.00 42.17 2.29
1830 1940 2.148768 GGTTCGGTACAAGGTGGAAAG 58.851 52.381 0.00 0.00 0.00 2.62
1835 1946 3.488721 CGATAGAGGTTCGGTACAAGGTG 60.489 52.174 0.00 0.00 39.76 4.00
1845 1956 4.030134 AGCAAACTACGATAGAGGTTCG 57.970 45.455 0.00 0.00 42.20 3.95
1887 2004 2.281484 TCGCAACAAGGACCAGCC 60.281 61.111 0.00 0.00 0.00 4.85
1988 3498 2.502213 TTCGTCGTATGTATGCCAGG 57.498 50.000 0.00 0.00 0.00 4.45
1989 3499 4.384846 GGTTATTCGTCGTATGTATGCCAG 59.615 45.833 0.00 0.00 0.00 4.85
1990 3500 4.202131 TGGTTATTCGTCGTATGTATGCCA 60.202 41.667 0.00 0.00 0.00 4.92
1991 3501 4.300803 TGGTTATTCGTCGTATGTATGCC 58.699 43.478 0.00 0.00 0.00 4.40
1992 3502 4.143389 GCTGGTTATTCGTCGTATGTATGC 60.143 45.833 0.00 0.00 0.00 3.14
1994 3504 4.038282 TGGCTGGTTATTCGTCGTATGTAT 59.962 41.667 0.00 0.00 0.00 2.29
1999 3509 2.995258 GTTTGGCTGGTTATTCGTCGTA 59.005 45.455 0.00 0.00 0.00 3.43
2001 3511 2.073816 AGTTTGGCTGGTTATTCGTCG 58.926 47.619 0.00 0.00 0.00 5.12
2023 3565 0.038618 TTCACGCTATGCTCACACGT 60.039 50.000 0.00 0.00 37.47 4.49
2031 3573 1.790481 GCGAAAAGGTTCACGCTATGC 60.790 52.381 0.00 0.00 46.06 3.14
2039 3581 2.018515 ACCGAAAAGCGAAAAGGTTCA 58.981 42.857 0.00 0.00 44.57 3.18
2042 3584 2.018515 TGAACCGAAAAGCGAAAAGGT 58.981 42.857 0.00 0.00 44.57 3.50
2049 3592 3.891324 TGGTTATTTGAACCGAAAAGCG 58.109 40.909 2.23 0.00 43.15 4.68
2087 6325 9.826574 AGAGCTAAAATACATGTATCCGTTTTA 57.173 29.630 18.52 16.94 0.00 1.52
2088 6326 8.612619 CAGAGCTAAAATACATGTATCCGTTTT 58.387 33.333 18.52 16.75 0.00 2.43
2089 6327 7.769044 ACAGAGCTAAAATACATGTATCCGTTT 59.231 33.333 18.52 16.46 0.00 3.60
2090 6328 7.272978 ACAGAGCTAAAATACATGTATCCGTT 58.727 34.615 18.52 14.48 0.00 4.44
2091 6329 6.817184 ACAGAGCTAAAATACATGTATCCGT 58.183 36.000 18.52 9.44 0.00 4.69
2092 6330 8.700644 GTTACAGAGCTAAAATACATGTATCCG 58.299 37.037 18.52 8.60 0.00 4.18
2093 6331 9.765795 AGTTACAGAGCTAAAATACATGTATCC 57.234 33.333 18.52 5.76 0.00 2.59
2096 6334 9.582431 GTCAGTTACAGAGCTAAAATACATGTA 57.418 33.333 8.27 8.27 0.00 2.29
2097 6335 8.094548 TGTCAGTTACAGAGCTAAAATACATGT 58.905 33.333 2.69 2.69 33.01 3.21
2098 6336 8.479313 TGTCAGTTACAGAGCTAAAATACATG 57.521 34.615 0.00 0.00 33.01 3.21
2099 6337 8.936864 GTTGTCAGTTACAGAGCTAAAATACAT 58.063 33.333 0.00 0.00 39.87 2.29
2100 6338 7.115805 CGTTGTCAGTTACAGAGCTAAAATACA 59.884 37.037 0.00 0.00 39.87 2.29
2101 6339 7.445836 CGTTGTCAGTTACAGAGCTAAAATAC 58.554 38.462 0.00 0.00 39.87 1.89
2104 6342 4.210537 GCGTTGTCAGTTACAGAGCTAAAA 59.789 41.667 0.00 0.00 39.87 1.52
2106 6344 3.314553 GCGTTGTCAGTTACAGAGCTAA 58.685 45.455 0.00 0.00 39.87 3.09
2114 6352 1.232621 GGTGGGGCGTTGTCAGTTAC 61.233 60.000 0.00 0.00 0.00 2.50
2126 6364 3.196207 TTGAGCACTGAGGTGGGGC 62.196 63.158 0.00 0.00 43.18 5.80
2130 6368 4.100035 TGGTATATCTTGAGCACTGAGGTG 59.900 45.833 0.00 0.00 45.53 4.00
2168 6406 7.867403 AGTCTGTCGTTAGGTCGTTTTAAATTA 59.133 33.333 0.00 0.00 0.00 1.40
2171 6409 5.591099 AGTCTGTCGTTAGGTCGTTTTAAA 58.409 37.500 0.00 0.00 0.00 1.52
2182 6420 5.365403 AGAGAACTGAAGTCTGTCGTTAG 57.635 43.478 0.00 0.00 0.00 2.34
2183 6421 5.298527 TCAAGAGAACTGAAGTCTGTCGTTA 59.701 40.000 0.00 0.00 0.00 3.18
2184 6422 4.098044 TCAAGAGAACTGAAGTCTGTCGTT 59.902 41.667 0.00 0.00 0.00 3.85
2185 6423 3.632604 TCAAGAGAACTGAAGTCTGTCGT 59.367 43.478 0.00 0.00 0.00 4.34
2186 6424 4.230314 TCAAGAGAACTGAAGTCTGTCG 57.770 45.455 0.00 0.00 0.00 4.35
2187 6425 6.910536 TTTTCAAGAGAACTGAAGTCTGTC 57.089 37.500 0.00 0.00 32.39 3.51
2188 6426 8.831550 GTTATTTTCAAGAGAACTGAAGTCTGT 58.168 33.333 0.00 0.00 32.39 3.41
2189 6427 9.050601 AGTTATTTTCAAGAGAACTGAAGTCTG 57.949 33.333 0.00 0.00 32.39 3.51
2190 6428 9.620259 AAGTTATTTTCAAGAGAACTGAAGTCT 57.380 29.630 0.00 0.00 32.39 3.24
2208 6446 9.874215 GCTACGTTTTACTCTGAAAAGTTATTT 57.126 29.630 0.00 0.00 32.44 1.40
2209 6447 9.048446 TGCTACGTTTTACTCTGAAAAGTTATT 57.952 29.630 0.00 0.00 32.44 1.40
2210 6448 8.597662 TGCTACGTTTTACTCTGAAAAGTTAT 57.402 30.769 0.00 0.00 32.44 1.89
2211 6449 8.422973 TTGCTACGTTTTACTCTGAAAAGTTA 57.577 30.769 0.00 0.00 32.44 2.24
2212 6450 6.913873 TGCTACGTTTTACTCTGAAAAGTT 57.086 33.333 0.00 0.00 32.44 2.66
2213 6451 6.913873 TTGCTACGTTTTACTCTGAAAAGT 57.086 33.333 0.00 0.00 34.13 2.66
2214 6452 8.609478 TTTTTGCTACGTTTTACTCTGAAAAG 57.391 30.769 0.00 0.00 0.00 2.27
2215 6453 9.015577 CATTTTTGCTACGTTTTACTCTGAAAA 57.984 29.630 0.00 0.00 0.00 2.29
2216 6454 7.166804 GCATTTTTGCTACGTTTTACTCTGAAA 59.833 33.333 0.00 0.00 0.00 2.69
2217 6455 6.635239 GCATTTTTGCTACGTTTTACTCTGAA 59.365 34.615 0.00 0.00 0.00 3.02
2218 6456 6.017440 AGCATTTTTGCTACGTTTTACTCTGA 60.017 34.615 0.00 0.00 44.28 3.27
2219 6457 6.142817 AGCATTTTTGCTACGTTTTACTCTG 58.857 36.000 0.00 0.00 44.28 3.35
2220 6458 6.204882 AGAGCATTTTTGCTACGTTTTACTCT 59.795 34.615 0.00 0.00 46.36 3.24
2221 6459 6.371389 AGAGCATTTTTGCTACGTTTTACTC 58.629 36.000 0.00 0.00 46.36 2.59
2222 6460 6.313744 AGAGCATTTTTGCTACGTTTTACT 57.686 33.333 0.00 0.00 46.36 2.24
2223 6461 6.986424 AAGAGCATTTTTGCTACGTTTTAC 57.014 33.333 0.00 0.00 46.36 2.01
2224 6462 6.419413 CCAAAGAGCATTTTTGCTACGTTTTA 59.581 34.615 0.00 0.00 46.36 1.52
2225 6463 5.234116 CCAAAGAGCATTTTTGCTACGTTTT 59.766 36.000 0.00 0.00 46.36 2.43
2226 6464 4.744631 CCAAAGAGCATTTTTGCTACGTTT 59.255 37.500 0.00 0.00 46.36 3.60
2227 6465 4.037446 TCCAAAGAGCATTTTTGCTACGTT 59.963 37.500 0.00 0.00 46.36 3.99
2228 6466 3.568007 TCCAAAGAGCATTTTTGCTACGT 59.432 39.130 0.00 0.00 46.36 3.57
2229 6467 4.159377 TCCAAAGAGCATTTTTGCTACG 57.841 40.909 0.00 0.00 46.36 3.51
2230 6468 4.488879 CCTCCAAAGAGCATTTTTGCTAC 58.511 43.478 0.00 0.00 46.36 3.58
2231 6469 3.056607 GCCTCCAAAGAGCATTTTTGCTA 60.057 43.478 0.00 0.00 46.36 3.49
2233 6471 2.071540 GCCTCCAAAGAGCATTTTTGC 58.928 47.619 0.00 0.00 38.96 3.68
2234 6472 2.691927 GGCCTCCAAAGAGCATTTTTG 58.308 47.619 0.00 0.00 38.96 2.44
2235 6473 1.273327 CGGCCTCCAAAGAGCATTTTT 59.727 47.619 0.00 0.00 38.96 1.94
2236 6474 0.890683 CGGCCTCCAAAGAGCATTTT 59.109 50.000 0.00 0.00 38.96 1.82
2237 6475 0.038166 TCGGCCTCCAAAGAGCATTT 59.962 50.000 0.00 0.00 38.96 2.32
2238 6476 0.393537 CTCGGCCTCCAAAGAGCATT 60.394 55.000 0.00 0.00 38.96 3.56
2239 6477 1.222936 CTCGGCCTCCAAAGAGCAT 59.777 57.895 0.00 0.00 38.96 3.79
2240 6478 2.665000 CTCGGCCTCCAAAGAGCA 59.335 61.111 0.00 0.00 38.96 4.26
2242 6480 1.743252 GTGCTCGGCCTCCAAAGAG 60.743 63.158 0.00 0.00 40.09 2.85
2243 6481 2.347490 GTGCTCGGCCTCCAAAGA 59.653 61.111 0.00 0.00 0.00 2.52
2244 6482 2.747855 GGTGCTCGGCCTCCAAAG 60.748 66.667 0.00 0.00 0.00 2.77
2245 6483 2.905996 ATGGTGCTCGGCCTCCAAA 61.906 57.895 0.00 0.00 35.88 3.28
2246 6484 3.329889 ATGGTGCTCGGCCTCCAA 61.330 61.111 0.00 0.00 35.88 3.53
2247 6485 4.100084 CATGGTGCTCGGCCTCCA 62.100 66.667 0.00 1.94 36.43 3.86
2248 6486 4.864334 CCATGGTGCTCGGCCTCC 62.864 72.222 2.57 0.00 0.00 4.30
2249 6487 4.864334 CCCATGGTGCTCGGCCTC 62.864 72.222 11.73 0.00 0.00 4.70
2253 6491 4.864334 GAGCCCCATGGTGCTCGG 62.864 72.222 29.80 15.69 43.94 4.63
2257 6495 3.482232 ATAGCGAGCCCCATGGTGC 62.482 63.158 11.79 11.79 0.00 5.01
2258 6496 1.302033 GATAGCGAGCCCCATGGTG 60.302 63.158 11.73 0.00 0.00 4.17
2259 6497 1.130054 ATGATAGCGAGCCCCATGGT 61.130 55.000 11.73 0.00 0.00 3.55
2260 6498 0.675837 CATGATAGCGAGCCCCATGG 60.676 60.000 4.14 4.14 33.08 3.66
2261 6499 0.675837 CCATGATAGCGAGCCCCATG 60.676 60.000 0.00 12.02 35.61 3.66
2262 6500 1.681666 CCATGATAGCGAGCCCCAT 59.318 57.895 0.00 0.00 0.00 4.00
2263 6501 2.519622 CCCATGATAGCGAGCCCCA 61.520 63.158 0.00 0.00 0.00 4.96
2264 6502 2.348998 CCCATGATAGCGAGCCCC 59.651 66.667 0.00 0.00 0.00 5.80
2265 6503 2.359230 GCCCATGATAGCGAGCCC 60.359 66.667 0.00 0.00 0.00 5.19
2271 6509 1.664965 GACCGACGCCCATGATAGC 60.665 63.158 0.00 0.00 0.00 2.97
2272 6510 0.389391 AAGACCGACGCCCATGATAG 59.611 55.000 0.00 0.00 0.00 2.08
2273 6511 0.387929 GAAGACCGACGCCCATGATA 59.612 55.000 0.00 0.00 0.00 2.15
2274 6512 1.144057 GAAGACCGACGCCCATGAT 59.856 57.895 0.00 0.00 0.00 2.45
2275 6513 2.279810 TGAAGACCGACGCCCATGA 61.280 57.895 0.00 0.00 0.00 3.07
2276 6514 2.100631 GTGAAGACCGACGCCCATG 61.101 63.158 0.00 0.00 0.00 3.66
2277 6515 1.899437 ATGTGAAGACCGACGCCCAT 61.899 55.000 0.00 0.00 0.00 4.00
2278 6516 2.579657 ATGTGAAGACCGACGCCCA 61.580 57.895 0.00 0.00 0.00 5.36
2279 6517 2.100631 CATGTGAAGACCGACGCCC 61.101 63.158 0.00 0.00 0.00 6.13
2280 6518 2.100631 CCATGTGAAGACCGACGCC 61.101 63.158 0.00 0.00 0.00 5.68
2281 6519 0.460284 ATCCATGTGAAGACCGACGC 60.460 55.000 0.00 0.00 0.00 5.19
2282 6520 1.135112 TGATCCATGTGAAGACCGACG 60.135 52.381 0.00 0.00 0.00 5.12
2283 6521 2.166459 TCTGATCCATGTGAAGACCGAC 59.834 50.000 0.00 0.00 0.00 4.79
2284 6522 2.166459 GTCTGATCCATGTGAAGACCGA 59.834 50.000 0.00 0.00 32.82 4.69
2285 6523 2.544685 GTCTGATCCATGTGAAGACCG 58.455 52.381 0.00 0.00 32.82 4.79
2286 6524 2.544685 CGTCTGATCCATGTGAAGACC 58.455 52.381 8.59 0.00 35.00 3.85
2287 6525 1.929836 GCGTCTGATCCATGTGAAGAC 59.070 52.381 0.00 0.00 35.09 3.01
2288 6526 1.550072 TGCGTCTGATCCATGTGAAGA 59.450 47.619 0.00 0.00 0.00 2.87
2289 6527 1.931841 CTGCGTCTGATCCATGTGAAG 59.068 52.381 0.00 0.00 0.00 3.02
2290 6528 2.008543 GCTGCGTCTGATCCATGTGAA 61.009 52.381 0.00 0.00 0.00 3.18
2291 6529 0.460811 GCTGCGTCTGATCCATGTGA 60.461 55.000 0.00 0.00 0.00 3.58
2292 6530 0.461516 AGCTGCGTCTGATCCATGTG 60.462 55.000 0.00 0.00 0.00 3.21
2293 6531 0.251354 AAGCTGCGTCTGATCCATGT 59.749 50.000 0.00 0.00 0.00 3.21
2294 6532 0.935898 GAAGCTGCGTCTGATCCATG 59.064 55.000 8.36 0.00 0.00 3.66
2295 6533 0.529337 CGAAGCTGCGTCTGATCCAT 60.529 55.000 5.73 0.00 0.00 3.41
2296 6534 1.153765 CGAAGCTGCGTCTGATCCA 60.154 57.895 5.73 0.00 0.00 3.41
2297 6535 0.100682 TACGAAGCTGCGTCTGATCC 59.899 55.000 26.26 0.00 44.39 3.36
2298 6536 1.192793 GTACGAAGCTGCGTCTGATC 58.807 55.000 26.26 6.77 44.39 2.92
2299 6537 0.811915 AGTACGAAGCTGCGTCTGAT 59.188 50.000 26.26 5.21 44.39 2.90
2300 6538 0.596577 AAGTACGAAGCTGCGTCTGA 59.403 50.000 26.26 2.79 44.39 3.27
2301 6539 0.710567 CAAGTACGAAGCTGCGTCTG 59.289 55.000 26.26 15.84 44.39 3.51
2302 6540 0.314302 ACAAGTACGAAGCTGCGTCT 59.686 50.000 26.26 17.58 44.39 4.18
2303 6541 0.708918 GACAAGTACGAAGCTGCGTC 59.291 55.000 26.26 15.47 44.39 5.19
2305 6543 0.985549 GAGACAAGTACGAAGCTGCG 59.014 55.000 14.05 14.05 37.29 5.18
2306 6544 2.065993 TGAGACAAGTACGAAGCTGC 57.934 50.000 0.00 0.00 0.00 5.25
2307 6545 3.579709 ACATGAGACAAGTACGAAGCTG 58.420 45.455 0.00 0.00 0.00 4.24
2308 6546 3.944055 ACATGAGACAAGTACGAAGCT 57.056 42.857 0.00 0.00 0.00 3.74
2309 6547 5.232414 GGAATACATGAGACAAGTACGAAGC 59.768 44.000 0.00 0.00 0.00 3.86
2310 6548 6.253727 GTGGAATACATGAGACAAGTACGAAG 59.746 42.308 0.00 0.00 0.00 3.79
2311 6549 6.097356 GTGGAATACATGAGACAAGTACGAA 58.903 40.000 0.00 0.00 0.00 3.85
2312 6550 5.393787 GGTGGAATACATGAGACAAGTACGA 60.394 44.000 0.00 0.00 0.00 3.43
2313 6551 4.804139 GGTGGAATACATGAGACAAGTACG 59.196 45.833 0.00 0.00 0.00 3.67
2314 6552 5.116882 GGGTGGAATACATGAGACAAGTAC 58.883 45.833 0.00 0.00 0.00 2.73
2315 6553 4.142026 CGGGTGGAATACATGAGACAAGTA 60.142 45.833 0.00 0.00 0.00 2.24
2316 6554 3.369471 CGGGTGGAATACATGAGACAAGT 60.369 47.826 0.00 0.00 0.00 3.16
2317 6555 3.198068 CGGGTGGAATACATGAGACAAG 58.802 50.000 0.00 0.00 0.00 3.16
2318 6556 2.679639 GCGGGTGGAATACATGAGACAA 60.680 50.000 0.00 0.00 0.00 3.18
2319 6557 1.134521 GCGGGTGGAATACATGAGACA 60.135 52.381 0.00 0.00 0.00 3.41
2320 6558 1.583054 GCGGGTGGAATACATGAGAC 58.417 55.000 0.00 0.00 0.00 3.36
2321 6559 0.468226 GGCGGGTGGAATACATGAGA 59.532 55.000 0.00 0.00 0.00 3.27
2322 6560 0.180171 TGGCGGGTGGAATACATGAG 59.820 55.000 0.00 0.00 0.00 2.90
2323 6561 0.180171 CTGGCGGGTGGAATACATGA 59.820 55.000 0.00 0.00 0.00 3.07
2324 6562 0.819259 CCTGGCGGGTGGAATACATG 60.819 60.000 3.48 0.00 0.00 3.21
2325 6563 1.531748 CCTGGCGGGTGGAATACAT 59.468 57.895 3.48 0.00 0.00 2.29
2326 6564 2.994699 CCTGGCGGGTGGAATACA 59.005 61.111 3.48 0.00 0.00 2.29
2327 6565 2.516225 GCCTGGCGGGTGGAATAC 60.516 66.667 15.16 0.00 37.43 1.89
2328 6566 1.858739 AAAGCCTGGCGGGTGGAATA 61.859 55.000 15.16 0.00 40.98 1.75
2329 6567 2.730129 AAAAGCCTGGCGGGTGGAAT 62.730 55.000 15.16 0.00 40.98 3.01
2330 6568 2.070399 TAAAAGCCTGGCGGGTGGAA 62.070 55.000 15.16 0.00 40.98 3.53
2331 6569 2.530672 TAAAAGCCTGGCGGGTGGA 61.531 57.895 15.16 0.00 40.98 4.02
2332 6570 2.034999 TAAAAGCCTGGCGGGTGG 59.965 61.111 15.16 0.00 40.98 4.61
2333 6571 1.602323 TGTAAAAGCCTGGCGGGTG 60.602 57.895 15.16 0.00 40.98 4.61
2334 6572 1.602605 GTGTAAAAGCCTGGCGGGT 60.603 57.895 15.16 4.10 44.55 5.28
2335 6573 2.340328 GGTGTAAAAGCCTGGCGGG 61.340 63.158 13.96 8.39 38.36 6.13
2336 6574 2.686816 CGGTGTAAAAGCCTGGCGG 61.687 63.158 13.96 0.00 0.00 6.13
2337 6575 2.867472 CGGTGTAAAAGCCTGGCG 59.133 61.111 13.96 0.00 0.00 5.69
2338 6576 2.265182 TGCGGTGTAAAAGCCTGGC 61.265 57.895 11.65 11.65 0.00 4.85
2339 6577 1.579429 GTGCGGTGTAAAAGCCTGG 59.421 57.895 0.00 0.00 0.00 4.45
2340 6578 1.579429 GGTGCGGTGTAAAAGCCTG 59.421 57.895 0.00 0.00 0.00 4.85
2341 6579 1.964373 CGGTGCGGTGTAAAAGCCT 60.964 57.895 0.00 0.00 0.00 4.58
2342 6580 0.950071 TACGGTGCGGTGTAAAAGCC 60.950 55.000 0.00 0.00 0.00 4.35
2343 6581 1.081094 ATACGGTGCGGTGTAAAAGC 58.919 50.000 0.00 0.00 0.00 3.51
2344 6582 2.094734 GGAATACGGTGCGGTGTAAAAG 59.905 50.000 0.00 0.00 0.00 2.27
2345 6583 2.075338 GGAATACGGTGCGGTGTAAAA 58.925 47.619 0.00 0.00 0.00 1.52
2346 6584 1.675415 GGGAATACGGTGCGGTGTAAA 60.675 52.381 0.00 0.00 0.00 2.01
2347 6585 0.108233 GGGAATACGGTGCGGTGTAA 60.108 55.000 0.00 0.00 0.00 2.41
2348 6586 1.256361 TGGGAATACGGTGCGGTGTA 61.256 55.000 0.00 0.00 0.00 2.90
2349 6587 1.906105 ATGGGAATACGGTGCGGTGT 61.906 55.000 0.00 0.00 0.00 4.16
2350 6588 0.746563 AATGGGAATACGGTGCGGTG 60.747 55.000 0.00 0.00 0.00 4.94
2351 6589 0.034863 AAATGGGAATACGGTGCGGT 60.035 50.000 0.00 0.00 0.00 5.68
2352 6590 1.956297 TAAATGGGAATACGGTGCGG 58.044 50.000 0.00 0.00 0.00 5.69
2353 6591 5.627172 CATAATAAATGGGAATACGGTGCG 58.373 41.667 0.00 0.00 0.00 5.34
2354 6592 5.048364 TGCATAATAAATGGGAATACGGTGC 60.048 40.000 0.00 0.00 0.00 5.01
2355 6593 6.016693 TGTGCATAATAAATGGGAATACGGTG 60.017 38.462 0.00 0.00 0.00 4.94
2356 6594 6.065374 TGTGCATAATAAATGGGAATACGGT 58.935 36.000 0.00 0.00 0.00 4.83
2357 6595 6.206634 ACTGTGCATAATAAATGGGAATACGG 59.793 38.462 0.00 0.00 0.00 4.02
2358 6596 7.077605 CACTGTGCATAATAAATGGGAATACG 58.922 38.462 0.00 0.00 0.00 3.06
2359 6597 7.370383 CCACTGTGCATAATAAATGGGAATAC 58.630 38.462 1.29 0.00 0.00 1.89
2360 6598 6.015519 GCCACTGTGCATAATAAATGGGAATA 60.016 38.462 1.29 0.00 0.00 1.75
2361 6599 5.221501 GCCACTGTGCATAATAAATGGGAAT 60.222 40.000 1.29 0.00 0.00 3.01
2362 6600 4.099266 GCCACTGTGCATAATAAATGGGAA 59.901 41.667 1.29 0.00 0.00 3.97
2363 6601 3.636300 GCCACTGTGCATAATAAATGGGA 59.364 43.478 1.29 0.00 0.00 4.37
2364 6602 3.384146 TGCCACTGTGCATAATAAATGGG 59.616 43.478 1.29 0.00 36.04 4.00
2365 6603 4.613944 CTGCCACTGTGCATAATAAATGG 58.386 43.478 1.29 0.00 41.16 3.16
2366 6604 4.046462 GCTGCCACTGTGCATAATAAATG 58.954 43.478 1.29 0.00 41.16 2.32
2367 6605 3.700539 TGCTGCCACTGTGCATAATAAAT 59.299 39.130 1.29 0.00 41.16 1.40
2368 6606 3.087781 TGCTGCCACTGTGCATAATAAA 58.912 40.909 1.29 0.00 41.16 1.40
2369 6607 2.423185 GTGCTGCCACTGTGCATAATAA 59.577 45.455 1.29 0.00 41.16 1.40
2370 6608 2.016318 GTGCTGCCACTGTGCATAATA 58.984 47.619 1.29 0.00 41.16 0.98
2371 6609 0.813184 GTGCTGCCACTGTGCATAAT 59.187 50.000 1.29 0.00 41.16 1.28
2372 6610 0.536915 TGTGCTGCCACTGTGCATAA 60.537 50.000 1.29 0.00 42.54 1.90
2373 6611 0.322726 ATGTGCTGCCACTGTGCATA 60.323 50.000 1.29 0.00 42.54 3.14
2374 6612 1.605451 ATGTGCTGCCACTGTGCAT 60.605 52.632 1.29 0.00 42.54 3.96
2375 6613 2.203379 ATGTGCTGCCACTGTGCA 60.203 55.556 1.29 3.65 42.54 4.57
2376 6614 1.236616 TACATGTGCTGCCACTGTGC 61.237 55.000 9.11 0.00 42.54 4.57
2377 6615 1.237533 TTACATGTGCTGCCACTGTG 58.762 50.000 9.11 0.00 42.54 3.66
2378 6616 1.608590 GTTTACATGTGCTGCCACTGT 59.391 47.619 9.11 0.20 42.54 3.55
2379 6617 1.068333 GGTTTACATGTGCTGCCACTG 60.068 52.381 9.11 0.00 42.54 3.66
2380 6618 1.247567 GGTTTACATGTGCTGCCACT 58.752 50.000 9.11 0.00 42.54 4.00
2381 6619 0.958091 TGGTTTACATGTGCTGCCAC 59.042 50.000 9.11 0.00 42.40 5.01
2382 6620 1.246649 CTGGTTTACATGTGCTGCCA 58.753 50.000 9.11 10.38 0.00 4.92
2383 6621 0.109132 GCTGGTTTACATGTGCTGCC 60.109 55.000 9.11 6.14 0.00 4.85
2384 6622 0.454957 CGCTGGTTTACATGTGCTGC 60.455 55.000 9.11 3.57 0.00 5.25
2385 6623 0.168788 CCGCTGGTTTACATGTGCTG 59.831 55.000 9.11 0.00 0.00 4.41
2386 6624 1.586154 GCCGCTGGTTTACATGTGCT 61.586 55.000 9.11 0.00 0.00 4.40
2387 6625 1.154035 GCCGCTGGTTTACATGTGC 60.154 57.895 9.11 0.51 0.00 4.57
2388 6626 1.240641 TGGCCGCTGGTTTACATGTG 61.241 55.000 9.11 0.00 0.00 3.21
2389 6627 0.960364 CTGGCCGCTGGTTTACATGT 60.960 55.000 2.69 2.69 0.00 3.21
2390 6628 0.676466 TCTGGCCGCTGGTTTACATG 60.676 55.000 0.00 0.00 0.00 3.21
2391 6629 0.676782 GTCTGGCCGCTGGTTTACAT 60.677 55.000 0.00 0.00 0.00 2.29
2392 6630 1.302192 GTCTGGCCGCTGGTTTACA 60.302 57.895 0.00 0.00 0.00 2.41
2393 6631 2.038837 GGTCTGGCCGCTGGTTTAC 61.039 63.158 0.00 0.00 0.00 2.01
2394 6632 2.349755 GGTCTGGCCGCTGGTTTA 59.650 61.111 0.00 0.00 0.00 2.01
2395 6633 3.850098 CTGGTCTGGCCGCTGGTTT 62.850 63.158 0.00 0.00 41.21 3.27
2396 6634 4.335647 CTGGTCTGGCCGCTGGTT 62.336 66.667 0.00 0.00 41.21 3.67
2405 6643 3.414700 GTTCGTGCGCTGGTCTGG 61.415 66.667 9.73 0.00 0.00 3.86
2406 6644 2.162921 CTTGTTCGTGCGCTGGTCTG 62.163 60.000 9.73 0.00 0.00 3.51
2407 6645 1.956170 CTTGTTCGTGCGCTGGTCT 60.956 57.895 9.73 0.00 0.00 3.85
2408 6646 2.244651 ACTTGTTCGTGCGCTGGTC 61.245 57.895 9.73 0.00 0.00 4.02
2409 6647 2.203015 ACTTGTTCGTGCGCTGGT 60.203 55.556 9.73 0.00 0.00 4.00
2410 6648 2.249309 CACTTGTTCGTGCGCTGG 59.751 61.111 9.73 0.00 0.00 4.85
2416 6654 1.201954 CGATGATGGCACTTGTTCGTG 60.202 52.381 0.00 0.00 37.94 4.35
2417 6655 1.078709 CGATGATGGCACTTGTTCGT 58.921 50.000 0.00 0.00 0.00 3.85
2418 6656 0.247814 GCGATGATGGCACTTGTTCG 60.248 55.000 0.00 0.00 0.00 3.95
2419 6657 0.804364 TGCGATGATGGCACTTGTTC 59.196 50.000 0.00 0.00 35.04 3.18
2420 6658 1.402968 GATGCGATGATGGCACTTGTT 59.597 47.619 3.74 0.00 44.23 2.83
2421 6659 1.019673 GATGCGATGATGGCACTTGT 58.980 50.000 3.74 0.00 44.23 3.16
2422 6660 0.041576 CGATGCGATGATGGCACTTG 60.042 55.000 3.74 0.00 44.23 3.16
2423 6661 0.462581 ACGATGCGATGATGGCACTT 60.463 50.000 3.74 0.00 44.23 3.16
2424 6662 1.144716 ACGATGCGATGATGGCACT 59.855 52.632 3.74 0.00 44.23 4.40
2425 6663 1.277739 CACGATGCGATGATGGCAC 59.722 57.895 3.74 0.00 44.23 5.01
2426 6664 2.536673 GCACGATGCGATGATGGCA 61.537 57.895 4.22 4.22 45.71 4.92
2427 6665 2.250485 GCACGATGCGATGATGGC 59.750 61.111 0.00 0.00 31.71 4.40
2436 6674 1.976478 TATGTTGCCGTGCACGATGC 61.976 55.000 39.10 32.29 45.29 3.91
2437 6675 0.026674 CTATGTTGCCGTGCACGATG 59.973 55.000 39.10 24.46 43.02 3.84
2438 6676 0.108377 TCTATGTTGCCGTGCACGAT 60.108 50.000 39.10 25.45 43.02 3.73
2439 6677 1.011968 GTCTATGTTGCCGTGCACGA 61.012 55.000 39.10 20.36 43.02 4.35
2440 6678 1.419922 GTCTATGTTGCCGTGCACG 59.580 57.895 31.77 31.77 38.71 5.34
2441 6679 1.011968 TCGTCTATGTTGCCGTGCAC 61.012 55.000 6.82 6.82 38.71 4.57
2442 6680 0.319986 TTCGTCTATGTTGCCGTGCA 60.320 50.000 0.00 0.00 36.47 4.57
2443 6681 0.094730 GTTCGTCTATGTTGCCGTGC 59.905 55.000 0.00 0.00 0.00 5.34
2444 6682 1.126113 GTGTTCGTCTATGTTGCCGTG 59.874 52.381 0.00 0.00 0.00 4.94
2445 6683 1.425412 GTGTTCGTCTATGTTGCCGT 58.575 50.000 0.00 0.00 0.00 5.68
2446 6684 0.365523 CGTGTTCGTCTATGTTGCCG 59.634 55.000 0.00 0.00 0.00 5.69
2447 6685 0.719465 CCGTGTTCGTCTATGTTGCC 59.281 55.000 0.00 0.00 35.01 4.52
2448 6686 0.719465 CCCGTGTTCGTCTATGTTGC 59.281 55.000 0.00 0.00 35.01 4.17
2449 6687 2.074547 ACCCGTGTTCGTCTATGTTG 57.925 50.000 0.00 0.00 35.01 3.33
2450 6688 2.165030 CCTACCCGTGTTCGTCTATGTT 59.835 50.000 0.00 0.00 35.01 2.71
2451 6689 1.747355 CCTACCCGTGTTCGTCTATGT 59.253 52.381 0.00 0.00 35.01 2.29
2452 6690 2.019249 TCCTACCCGTGTTCGTCTATG 58.981 52.381 0.00 0.00 35.01 2.23
2453 6691 2.425143 TCCTACCCGTGTTCGTCTAT 57.575 50.000 0.00 0.00 35.01 1.98
2454 6692 2.425143 ATCCTACCCGTGTTCGTCTA 57.575 50.000 0.00 0.00 35.01 2.59
2455 6693 1.475682 GAATCCTACCCGTGTTCGTCT 59.524 52.381 0.00 0.00 35.01 4.18
2456 6694 1.475682 AGAATCCTACCCGTGTTCGTC 59.524 52.381 0.00 0.00 35.01 4.20
2457 6695 1.203994 CAGAATCCTACCCGTGTTCGT 59.796 52.381 0.00 0.00 35.01 3.85
2458 6696 1.470979 CCAGAATCCTACCCGTGTTCG 60.471 57.143 0.00 0.00 0.00 3.95
2459 6697 1.742750 GCCAGAATCCTACCCGTGTTC 60.743 57.143 0.00 0.00 0.00 3.18
2460 6698 0.252197 GCCAGAATCCTACCCGTGTT 59.748 55.000 0.00 0.00 0.00 3.32
2461 6699 0.907704 TGCCAGAATCCTACCCGTGT 60.908 55.000 0.00 0.00 0.00 4.49
2462 6700 0.179073 CTGCCAGAATCCTACCCGTG 60.179 60.000 0.00 0.00 0.00 4.94
2463 6701 0.325296 TCTGCCAGAATCCTACCCGT 60.325 55.000 0.00 0.00 0.00 5.28
2464 6702 1.051812 ATCTGCCAGAATCCTACCCG 58.948 55.000 0.00 0.00 0.00 5.28
2465 6703 2.173569 ACAATCTGCCAGAATCCTACCC 59.826 50.000 0.00 0.00 0.00 3.69
2466 6704 3.567478 ACAATCTGCCAGAATCCTACC 57.433 47.619 0.00 0.00 0.00 3.18
2467 6705 4.061596 GCTACAATCTGCCAGAATCCTAC 58.938 47.826 0.00 0.00 0.00 3.18
2468 6706 3.243873 CGCTACAATCTGCCAGAATCCTA 60.244 47.826 0.00 0.00 0.00 2.94
2469 6707 2.484417 CGCTACAATCTGCCAGAATCCT 60.484 50.000 0.00 0.00 0.00 3.24
2470 6708 1.869767 CGCTACAATCTGCCAGAATCC 59.130 52.381 0.00 0.00 0.00 3.01
2471 6709 2.541762 GTCGCTACAATCTGCCAGAATC 59.458 50.000 0.00 0.00 0.00 2.52
2472 6710 2.555199 GTCGCTACAATCTGCCAGAAT 58.445 47.619 0.00 0.00 0.00 2.40
2473 6711 1.405526 GGTCGCTACAATCTGCCAGAA 60.406 52.381 0.00 0.00 0.00 3.02
2474 6712 0.175760 GGTCGCTACAATCTGCCAGA 59.824 55.000 0.00 0.00 0.00 3.86
2475 6713 1.148157 CGGTCGCTACAATCTGCCAG 61.148 60.000 0.00 0.00 0.00 4.85
2476 6714 1.153647 CGGTCGCTACAATCTGCCA 60.154 57.895 0.00 0.00 0.00 4.92
2477 6715 1.883084 CCGGTCGCTACAATCTGCC 60.883 63.158 0.00 0.00 0.00 4.85
2478 6716 0.739813 AACCGGTCGCTACAATCTGC 60.740 55.000 8.04 0.00 0.00 4.26
2479 6717 1.722011 AAACCGGTCGCTACAATCTG 58.278 50.000 8.04 0.00 0.00 2.90
2480 6718 2.467566 AAAACCGGTCGCTACAATCT 57.532 45.000 8.04 0.00 0.00 2.40
2481 6719 3.256558 AGTAAAACCGGTCGCTACAATC 58.743 45.455 8.04 0.00 0.00 2.67
2482 6720 3.256558 GAGTAAAACCGGTCGCTACAAT 58.743 45.455 8.04 0.00 0.00 2.71
2483 6721 2.676076 GAGTAAAACCGGTCGCTACAA 58.324 47.619 8.04 0.00 0.00 2.41
2484 6722 1.401409 CGAGTAAAACCGGTCGCTACA 60.401 52.381 8.04 0.00 0.00 2.74
2485 6723 1.262882 CGAGTAAAACCGGTCGCTAC 58.737 55.000 8.04 10.05 0.00 3.58
2486 6724 3.700577 CGAGTAAAACCGGTCGCTA 57.299 52.632 8.04 0.00 0.00 4.26
2487 6725 4.565531 CGAGTAAAACCGGTCGCT 57.434 55.556 8.04 3.41 0.00 4.93
2489 6727 0.387622 TCAGCGAGTAAAACCGGTCG 60.388 55.000 8.04 7.24 34.04 4.79
2490 6728 1.659098 CATCAGCGAGTAAAACCGGTC 59.341 52.381 8.04 0.00 34.04 4.79
2491 6729 1.722011 CATCAGCGAGTAAAACCGGT 58.278 50.000 0.00 0.00 36.94 5.28
2492 6730 0.373716 GCATCAGCGAGTAAAACCGG 59.626 55.000 0.00 0.00 0.00 5.28
2493 6731 1.075542 TGCATCAGCGAGTAAAACCG 58.924 50.000 0.00 0.00 46.23 4.44
2494 6732 2.032178 GGATGCATCAGCGAGTAAAACC 59.968 50.000 27.25 2.73 46.23 3.27
2495 6733 2.032178 GGGATGCATCAGCGAGTAAAAC 59.968 50.000 27.25 5.88 46.23 2.43
2496 6734 2.288666 GGGATGCATCAGCGAGTAAAA 58.711 47.619 27.25 0.00 46.23 1.52
2497 6735 1.209261 TGGGATGCATCAGCGAGTAAA 59.791 47.619 27.25 0.00 46.23 2.01
2498 6736 0.829990 TGGGATGCATCAGCGAGTAA 59.170 50.000 27.25 1.42 46.23 2.24
2499 6737 1.051008 ATGGGATGCATCAGCGAGTA 58.949 50.000 27.25 6.17 46.23 2.59
2500 6738 0.534427 CATGGGATGCATCAGCGAGT 60.534 55.000 27.25 4.91 46.23 4.18
2501 6739 2.244946 CATGGGATGCATCAGCGAG 58.755 57.895 27.25 9.62 46.23 5.03
2502 6740 4.468007 CATGGGATGCATCAGCGA 57.532 55.556 27.25 9.39 46.23 4.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.