Multiple sequence alignment - TraesCS3A01G137200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G137200 chr3A 100.000 3699 0 0 1 3699 114432342 114436040 0.000000e+00 6831
1 TraesCS3A01G137200 chr3B 94.502 1164 53 7 883 2039 147552967 147554126 0.000000e+00 1784
2 TraesCS3A01G137200 chr3B 94.955 892 26 5 2811 3694 147557819 147558699 0.000000e+00 1380
3 TraesCS3A01G137200 chr3B 98.534 341 5 0 2037 2377 244231010 244230670 1.470000e-168 603
4 TraesCS3A01G137200 chr3B 90.196 357 16 1 2374 2730 147554124 147554461 7.290000e-122 448
5 TraesCS3A01G137200 chr3B 100.000 78 0 0 2743 2820 147554450 147554527 1.070000e-30 145
6 TraesCS3A01G137200 chr3D 92.685 1203 57 17 848 2039 96401905 96403087 0.000000e+00 1705
7 TraesCS3A01G137200 chr3D 89.952 826 45 13 2908 3696 96403629 96404453 0.000000e+00 1031
8 TraesCS3A01G137200 chr3D 91.111 540 24 8 2374 2913 96403085 96403600 0.000000e+00 710
9 TraesCS3A01G137200 chr3D 78.311 1125 197 22 921 2038 516667250 516666166 0.000000e+00 682
10 TraesCS3A01G137200 chr3D 82.620 397 56 7 1079 1472 516418770 516419156 4.580000e-89 339
11 TraesCS3A01G137200 chr7D 89.026 729 64 13 69 789 241941965 241941245 0.000000e+00 889
12 TraesCS3A01G137200 chr7A 89.152 719 47 9 73 769 3970482 3969773 0.000000e+00 867
13 TraesCS3A01G137200 chr7A 87.083 720 62 20 75 783 120577027 120576328 0.000000e+00 785
14 TraesCS3A01G137200 chr7A 79.006 362 72 4 1180 1539 6531909 6532268 1.030000e-60 244
15 TraesCS3A01G137200 chrUn 88.579 718 54 20 70 769 26879185 26879892 0.000000e+00 846
16 TraesCS3A01G137200 chr1A 88.920 704 53 16 73 770 541981002 541980318 0.000000e+00 845
17 TraesCS3A01G137200 chr1A 98.529 340 5 0 2037 2376 151875782 151875443 5.290000e-168 601
18 TraesCS3A01G137200 chr1D 88.515 714 56 19 72 769 42359407 42360110 0.000000e+00 841
19 TraesCS3A01G137200 chr5A 87.225 728 69 16 72 782 40154478 40153758 0.000000e+00 808
20 TraesCS3A01G137200 chr5A 97.708 349 8 0 2026 2374 72863777 72863429 5.290000e-168 601
21 TraesCS3A01G137200 chr4A 87.380 729 59 19 71 781 610355187 610354474 0.000000e+00 806
22 TraesCS3A01G137200 chr4A 86.798 712 68 21 73 769 17400671 17399971 0.000000e+00 771
23 TraesCS3A01G137200 chr4A 78.528 163 26 7 2500 2660 557966768 557966613 8.450000e-17 99
24 TraesCS3A01G137200 chr5B 98.824 340 4 0 2037 2376 595128817 595129156 1.140000e-169 606
25 TraesCS3A01G137200 chr4B 97.989 348 5 1 2037 2382 245686119 245685772 1.470000e-168 603
26 TraesCS3A01G137200 chr4B 97.443 352 7 2 2039 2388 128541212 128540861 1.900000e-167 599
27 TraesCS3A01G137200 chr6B 98.529 340 5 0 2037 2376 589123140 589123479 5.290000e-168 601
28 TraesCS3A01G137200 chr2A 97.971 345 7 0 2030 2374 423776441 423776097 1.900000e-167 599
29 TraesCS3A01G137200 chr2A 97.695 347 8 0 2029 2375 218142624 218142278 6.840000e-167 597
30 TraesCS3A01G137200 chr2A 80.980 347 60 6 1220 1564 717557067 717556725 1.690000e-68 270
31 TraesCS3A01G137200 chr4D 83.102 432 70 3 1138 1568 41920261 41920690 1.250000e-104 390
32 TraesCS3A01G137200 chr4D 79.755 163 24 7 2500 2660 41921289 41921444 3.910000e-20 110
33 TraesCS3A01G137200 chr2D 79.097 421 85 2 1143 1560 587370752 587370332 1.680000e-73 287
34 TraesCS3A01G137200 chr2B 80.183 328 61 4 1205 1530 698002634 698002959 3.690000e-60 243


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G137200 chr3A 114432342 114436040 3698 False 6831.000000 6831 100.000000 1 3699 1 chr3A.!!$F1 3698
1 TraesCS3A01G137200 chr3B 147552967 147558699 5732 False 939.250000 1784 94.913250 883 3694 4 chr3B.!!$F1 2811
2 TraesCS3A01G137200 chr3D 96401905 96404453 2548 False 1148.666667 1705 91.249333 848 3696 3 chr3D.!!$F2 2848
3 TraesCS3A01G137200 chr3D 516666166 516667250 1084 True 682.000000 682 78.311000 921 2038 1 chr3D.!!$R1 1117
4 TraesCS3A01G137200 chr7D 241941245 241941965 720 True 889.000000 889 89.026000 69 789 1 chr7D.!!$R1 720
5 TraesCS3A01G137200 chr7A 3969773 3970482 709 True 867.000000 867 89.152000 73 769 1 chr7A.!!$R1 696
6 TraesCS3A01G137200 chr7A 120576328 120577027 699 True 785.000000 785 87.083000 75 783 1 chr7A.!!$R2 708
7 TraesCS3A01G137200 chrUn 26879185 26879892 707 False 846.000000 846 88.579000 70 769 1 chrUn.!!$F1 699
8 TraesCS3A01G137200 chr1A 541980318 541981002 684 True 845.000000 845 88.920000 73 770 1 chr1A.!!$R2 697
9 TraesCS3A01G137200 chr1D 42359407 42360110 703 False 841.000000 841 88.515000 72 769 1 chr1D.!!$F1 697
10 TraesCS3A01G137200 chr5A 40153758 40154478 720 True 808.000000 808 87.225000 72 782 1 chr5A.!!$R1 710
11 TraesCS3A01G137200 chr4A 610354474 610355187 713 True 806.000000 806 87.380000 71 781 1 chr4A.!!$R3 710
12 TraesCS3A01G137200 chr4A 17399971 17400671 700 True 771.000000 771 86.798000 73 769 1 chr4A.!!$R1 696
13 TraesCS3A01G137200 chr4D 41920261 41921444 1183 False 250.000000 390 81.428500 1138 2660 2 chr4D.!!$F1 1522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
881 983 0.107831 TCAAACTCCCAACTCACCGG 59.892 55.0 0.00 0.0 0.0 5.28 F
885 987 0.178941 ACTCCCAACTCACCGGTACT 60.179 55.0 6.87 0.0 0.0 2.73 F
2309 2452 0.178990 GTCAGGGGTGCTTGGAACTT 60.179 55.0 0.00 0.0 0.0 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2366 2509 0.105039 GTCAGCGGGATAAGAGGGTG 59.895 60.0 0.0 0.0 0.00 4.61 R
2367 2510 0.325296 TGTCAGCGGGATAAGAGGGT 60.325 55.0 0.0 0.0 0.00 4.34 R
3541 7056 0.323633 CATGTCCATGCTCCCACCAA 60.324 55.0 0.0 0.0 31.39 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.870363 GAACTTGCCAAGATTTTAGTGCA 58.130 39.130 12.25 0.00 0.00 4.57
23 24 5.473039 GAACTTGCCAAGATTTTAGTGCAT 58.527 37.500 12.25 0.00 0.00 3.96
24 25 5.064441 ACTTGCCAAGATTTTAGTGCATC 57.936 39.130 12.25 0.00 0.00 3.91
25 26 4.523943 ACTTGCCAAGATTTTAGTGCATCA 59.476 37.500 12.25 0.00 0.00 3.07
26 27 5.010922 ACTTGCCAAGATTTTAGTGCATCAA 59.989 36.000 12.25 0.00 0.00 2.57
27 28 5.664294 TGCCAAGATTTTAGTGCATCAAT 57.336 34.783 0.00 0.00 0.00 2.57
28 29 6.772360 TGCCAAGATTTTAGTGCATCAATA 57.228 33.333 0.00 0.00 0.00 1.90
29 30 7.350744 TGCCAAGATTTTAGTGCATCAATAT 57.649 32.000 0.00 0.00 0.00 1.28
30 31 8.462589 TGCCAAGATTTTAGTGCATCAATATA 57.537 30.769 0.00 0.00 0.00 0.86
31 32 8.911965 TGCCAAGATTTTAGTGCATCAATATAA 58.088 29.630 0.00 0.00 0.00 0.98
32 33 9.918630 GCCAAGATTTTAGTGCATCAATATAAT 57.081 29.630 0.00 0.00 0.00 1.28
43 44 8.017373 AGTGCATCAATATAATAATGAACGTGC 58.983 33.333 0.00 0.00 33.63 5.34
44 45 7.802720 GTGCATCAATATAATAATGAACGTGCA 59.197 33.333 0.00 0.00 35.45 4.57
45 46 8.016801 TGCATCAATATAATAATGAACGTGCAG 58.983 33.333 1.02 0.00 33.87 4.41
46 47 8.017373 GCATCAATATAATAATGAACGTGCAGT 58.983 33.333 1.02 0.74 30.72 4.40
56 57 4.582760 CGTGCAGTTACGGGCTAA 57.417 55.556 0.00 0.00 40.22 3.09
57 58 3.059603 CGTGCAGTTACGGGCTAAT 57.940 52.632 0.00 0.00 40.22 1.73
58 59 0.928229 CGTGCAGTTACGGGCTAATC 59.072 55.000 0.00 0.00 40.22 1.75
59 60 1.470979 CGTGCAGTTACGGGCTAATCT 60.471 52.381 0.00 0.00 40.22 2.40
60 61 2.202566 GTGCAGTTACGGGCTAATCTC 58.797 52.381 0.00 0.00 0.00 2.75
61 62 1.138266 TGCAGTTACGGGCTAATCTCC 59.862 52.381 4.02 0.00 0.00 3.71
62 63 1.540580 GCAGTTACGGGCTAATCTCCC 60.541 57.143 0.00 0.00 40.43 4.30
63 64 1.760613 CAGTTACGGGCTAATCTCCCA 59.239 52.381 0.00 0.00 44.11 4.37
64 65 2.169769 CAGTTACGGGCTAATCTCCCAA 59.830 50.000 0.00 0.00 44.11 4.12
65 66 3.046374 AGTTACGGGCTAATCTCCCAAT 58.954 45.455 0.00 0.00 44.11 3.16
66 67 3.139077 GTTACGGGCTAATCTCCCAATG 58.861 50.000 0.00 0.00 44.11 2.82
67 68 1.213296 ACGGGCTAATCTCCCAATGT 58.787 50.000 0.00 0.00 44.11 2.71
111 112 6.861065 TTCACACTGTCTTAAAATCTGGTC 57.139 37.500 0.00 0.00 0.00 4.02
452 534 1.356270 CGTGCATGTGTGTTGCTGT 59.644 52.632 0.00 0.00 40.77 4.40
457 539 1.469595 GCATGTGTGTTGCTGTGTGTT 60.470 47.619 0.00 0.00 37.14 3.32
458 540 2.186891 CATGTGTGTTGCTGTGTGTTG 58.813 47.619 0.00 0.00 0.00 3.33
459 541 1.242989 TGTGTGTTGCTGTGTGTTGT 58.757 45.000 0.00 0.00 0.00 3.32
460 542 1.611006 TGTGTGTTGCTGTGTGTTGTT 59.389 42.857 0.00 0.00 0.00 2.83
461 543 1.984990 GTGTGTTGCTGTGTGTTGTTG 59.015 47.619 0.00 0.00 0.00 3.33
462 544 1.611006 TGTGTTGCTGTGTGTTGTTGT 59.389 42.857 0.00 0.00 0.00 3.32
516 616 1.154131 TTGTTGTGTGTGTGTGCGC 60.154 52.632 0.00 0.00 0.00 6.09
517 617 2.647481 GTTGTGTGTGTGTGCGCG 60.647 61.111 0.00 0.00 0.00 6.86
518 618 3.121676 TTGTGTGTGTGTGCGCGT 61.122 55.556 8.43 0.00 0.00 6.01
519 619 3.374087 TTGTGTGTGTGTGCGCGTG 62.374 57.895 8.43 0.00 0.00 5.34
535 635 1.836510 CGTGCGTGTGTTGGTGCATA 61.837 55.000 0.00 0.00 39.85 3.14
577 677 1.381191 TCCTGCCCTCGCACTGATA 60.381 57.895 0.00 0.00 41.12 2.15
578 678 0.975556 TCCTGCCCTCGCACTGATAA 60.976 55.000 0.00 0.00 41.12 1.75
638 740 3.642141 TGAGGGGCAAAAGAGTCTTTTT 58.358 40.909 24.99 12.68 0.00 1.94
672 774 8.532977 TTTAGGCTCAAAATAAACAGAAATGC 57.467 30.769 0.00 0.00 0.00 3.56
797 899 6.417191 TTTCTCATGTTTATACTCCGTTGC 57.583 37.500 0.00 0.00 0.00 4.17
798 900 5.079689 TCTCATGTTTATACTCCGTTGCA 57.920 39.130 0.00 0.00 0.00 4.08
799 901 5.483811 TCTCATGTTTATACTCCGTTGCAA 58.516 37.500 0.00 0.00 0.00 4.08
800 902 6.112734 TCTCATGTTTATACTCCGTTGCAAT 58.887 36.000 0.59 0.00 0.00 3.56
801 903 6.257849 TCTCATGTTTATACTCCGTTGCAATC 59.742 38.462 0.59 0.00 0.00 2.67
802 904 4.850859 TGTTTATACTCCGTTGCAATCG 57.149 40.909 0.59 8.41 0.00 3.34
803 905 3.062909 TGTTTATACTCCGTTGCAATCGC 59.937 43.478 0.59 0.00 39.24 4.58
812 914 3.618652 TGCAATCGCATGGGCAAT 58.381 50.000 4.59 0.00 45.36 3.56
813 915 1.898885 TGCAATCGCATGGGCAATT 59.101 47.368 4.59 0.00 45.36 2.32
814 916 0.460459 TGCAATCGCATGGGCAATTG 60.460 50.000 15.73 15.73 45.21 2.32
815 917 1.155424 GCAATCGCATGGGCAATTGG 61.155 55.000 19.37 7.37 43.17 3.16
816 918 1.144496 AATCGCATGGGCAATTGGC 59.856 52.632 23.06 23.06 41.24 4.52
824 926 0.609151 TGGGCAATTGGCAGTCAATG 59.391 50.000 30.43 0.00 44.68 2.82
825 927 0.609662 GGGCAATTGGCAGTCAATGT 59.390 50.000 30.43 0.00 44.68 2.71
826 928 1.824230 GGGCAATTGGCAGTCAATGTA 59.176 47.619 30.43 0.00 44.68 2.29
827 929 2.431782 GGGCAATTGGCAGTCAATGTAT 59.568 45.455 30.43 0.00 44.68 2.29
828 930 3.636300 GGGCAATTGGCAGTCAATGTATA 59.364 43.478 30.43 0.00 44.68 1.47
829 931 4.099266 GGGCAATTGGCAGTCAATGTATAA 59.901 41.667 30.43 0.00 44.68 0.98
830 932 5.395103 GGGCAATTGGCAGTCAATGTATAAA 60.395 40.000 30.43 0.00 44.68 1.40
831 933 6.105333 GGCAATTGGCAGTCAATGTATAAAA 58.895 36.000 25.76 0.00 44.68 1.52
832 934 6.762661 GGCAATTGGCAGTCAATGTATAAAAT 59.237 34.615 25.76 0.00 44.68 1.82
833 935 7.254522 GGCAATTGGCAGTCAATGTATAAAATG 60.255 37.037 25.76 0.00 44.68 2.32
834 936 7.623770 CAATTGGCAGTCAATGTATAAAATGC 58.376 34.615 0.00 0.00 44.68 3.56
835 937 5.911378 TGGCAGTCAATGTATAAAATGCA 57.089 34.783 0.00 0.00 34.17 3.96
836 938 6.278172 TGGCAGTCAATGTATAAAATGCAA 57.722 33.333 0.00 0.00 34.17 4.08
837 939 6.695429 TGGCAGTCAATGTATAAAATGCAAA 58.305 32.000 0.00 0.00 34.17 3.68
838 940 7.157347 TGGCAGTCAATGTATAAAATGCAAAA 58.843 30.769 0.00 0.00 34.17 2.44
839 941 7.331440 TGGCAGTCAATGTATAAAATGCAAAAG 59.669 33.333 0.00 0.00 34.17 2.27
840 942 7.545265 GGCAGTCAATGTATAAAATGCAAAAGA 59.455 33.333 0.00 0.00 34.17 2.52
841 943 8.924691 GCAGTCAATGTATAAAATGCAAAAGAA 58.075 29.630 0.00 0.00 32.79 2.52
843 945 9.643693 AGTCAATGTATAAAATGCAAAAGAAGG 57.356 29.630 0.00 0.00 0.00 3.46
844 946 9.638239 GTCAATGTATAAAATGCAAAAGAAGGA 57.362 29.630 0.00 0.00 0.00 3.36
847 949 8.707938 ATGTATAAAATGCAAAAGAAGGAAGC 57.292 30.769 0.00 0.00 0.00 3.86
848 950 7.665690 TGTATAAAATGCAAAAGAAGGAAGCA 58.334 30.769 0.00 0.00 39.79 3.91
849 951 7.598493 TGTATAAAATGCAAAAGAAGGAAGCAC 59.402 33.333 0.00 0.00 38.12 4.40
850 952 4.405116 AAATGCAAAAGAAGGAAGCACA 57.595 36.364 0.00 0.00 38.12 4.57
851 953 2.869233 TGCAAAAGAAGGAAGCACAC 57.131 45.000 0.00 0.00 0.00 3.82
852 954 2.098614 TGCAAAAGAAGGAAGCACACA 58.901 42.857 0.00 0.00 0.00 3.72
867 969 3.254166 AGCACACATTCACCATCTCAAAC 59.746 43.478 0.00 0.00 0.00 2.93
881 983 0.107831 TCAAACTCCCAACTCACCGG 59.892 55.000 0.00 0.00 0.00 5.28
882 984 0.179029 CAAACTCCCAACTCACCGGT 60.179 55.000 0.00 0.00 0.00 5.28
885 987 0.178941 ACTCCCAACTCACCGGTACT 60.179 55.000 6.87 0.00 0.00 2.73
886 988 1.076024 ACTCCCAACTCACCGGTACTA 59.924 52.381 6.87 0.00 0.00 1.82
887 989 1.475682 CTCCCAACTCACCGGTACTAC 59.524 57.143 6.87 0.00 0.00 2.73
888 990 1.203038 TCCCAACTCACCGGTACTACA 60.203 52.381 6.87 0.00 0.00 2.74
889 991 1.067354 CCCAACTCACCGGTACTACAC 60.067 57.143 6.87 0.00 0.00 2.90
941 1044 2.543777 TCTTTCGTTTCTCCAGGGTG 57.456 50.000 0.00 0.00 0.00 4.61
984 1087 6.419484 TCTTAATTGGGCGAATCAGATCTA 57.581 37.500 0.00 0.00 0.00 1.98
1136 1258 2.513204 CTCGTCGCCGTCCTCCTA 60.513 66.667 0.00 0.00 35.01 2.94
1140 1262 2.124403 TCGCCGTCCTCCTACTCC 60.124 66.667 0.00 0.00 0.00 3.85
1144 1266 2.702302 CCGTCCTCCTACTCCCCCT 61.702 68.421 0.00 0.00 0.00 4.79
1185 1307 2.120232 GACATGGTTCGACAGATAGCG 58.880 52.381 0.00 0.00 0.00 4.26
1636 1758 5.106277 TGGTACTATATCAGATACTGCGTGC 60.106 44.000 0.00 0.00 0.00 5.34
1641 1763 2.509336 AGATACTGCGTGCGTGCC 60.509 61.111 0.00 0.00 0.00 5.01
1819 1941 3.313526 GCTATACTTTGTGCACCATCCTG 59.686 47.826 15.69 1.25 0.00 3.86
2042 2185 6.685527 CCTTATCTTGGAAAGGTTTAGAGC 57.314 41.667 0.00 0.00 46.24 4.09
2043 2186 6.180472 CCTTATCTTGGAAAGGTTTAGAGCA 58.820 40.000 0.00 0.00 46.24 4.26
2044 2187 6.830838 CCTTATCTTGGAAAGGTTTAGAGCAT 59.169 38.462 0.00 0.00 46.24 3.79
2045 2188 7.201767 CCTTATCTTGGAAAGGTTTAGAGCATG 60.202 40.741 0.00 0.00 46.24 4.06
2046 2189 5.241403 TCTTGGAAAGGTTTAGAGCATGA 57.759 39.130 0.00 0.00 46.24 3.07
2047 2190 5.819991 TCTTGGAAAGGTTTAGAGCATGAT 58.180 37.500 0.00 0.00 46.24 2.45
2048 2191 6.248433 TCTTGGAAAGGTTTAGAGCATGATT 58.752 36.000 0.00 0.00 46.24 2.57
2049 2192 5.902613 TGGAAAGGTTTAGAGCATGATTG 57.097 39.130 0.00 0.00 0.00 2.67
2050 2193 4.706476 TGGAAAGGTTTAGAGCATGATTGG 59.294 41.667 0.00 0.00 0.00 3.16
2051 2194 4.949856 GGAAAGGTTTAGAGCATGATTGGA 59.050 41.667 0.00 0.00 0.00 3.53
2052 2195 5.595952 GGAAAGGTTTAGAGCATGATTGGAT 59.404 40.000 0.00 0.00 0.00 3.41
2053 2196 6.772716 GGAAAGGTTTAGAGCATGATTGGATA 59.227 38.462 0.00 0.00 0.00 2.59
2054 2197 7.255277 GGAAAGGTTTAGAGCATGATTGGATAC 60.255 40.741 0.00 0.00 0.00 2.24
2055 2198 5.300752 AGGTTTAGAGCATGATTGGATACG 58.699 41.667 0.00 0.00 42.51 3.06
2056 2199 5.057149 GGTTTAGAGCATGATTGGATACGT 58.943 41.667 0.00 0.00 42.51 3.57
2057 2200 5.527582 GGTTTAGAGCATGATTGGATACGTT 59.472 40.000 0.00 0.00 42.51 3.99
2058 2201 6.038271 GGTTTAGAGCATGATTGGATACGTTT 59.962 38.462 0.00 0.00 42.51 3.60
2059 2202 7.415206 GGTTTAGAGCATGATTGGATACGTTTT 60.415 37.037 0.00 0.00 42.51 2.43
2060 2203 8.609176 GTTTAGAGCATGATTGGATACGTTTTA 58.391 33.333 0.00 0.00 42.51 1.52
2061 2204 6.851222 AGAGCATGATTGGATACGTTTTAG 57.149 37.500 0.00 0.00 42.51 1.85
2062 2205 6.349300 AGAGCATGATTGGATACGTTTTAGT 58.651 36.000 0.00 0.00 42.51 2.24
2063 2206 6.480320 AGAGCATGATTGGATACGTTTTAGTC 59.520 38.462 0.00 0.00 42.51 2.59
2064 2207 5.527582 AGCATGATTGGATACGTTTTAGTCC 59.472 40.000 0.00 0.00 42.51 3.85
2065 2208 5.277828 GCATGATTGGATACGTTTTAGTCCC 60.278 44.000 0.00 0.00 42.51 4.46
2066 2209 5.423704 TGATTGGATACGTTTTAGTCCCA 57.576 39.130 0.00 0.00 42.51 4.37
2067 2210 5.996644 TGATTGGATACGTTTTAGTCCCAT 58.003 37.500 0.00 0.00 42.51 4.00
2068 2211 5.820423 TGATTGGATACGTTTTAGTCCCATG 59.180 40.000 0.00 0.00 42.51 3.66
2069 2212 5.423704 TTGGATACGTTTTAGTCCCATGA 57.576 39.130 0.00 0.00 42.51 3.07
2070 2213 4.761975 TGGATACGTTTTAGTCCCATGAC 58.238 43.478 0.00 0.00 40.25 3.06
2072 2215 5.657745 TGGATACGTTTTAGTCCCATGACTA 59.342 40.000 0.00 0.00 45.97 2.59
2083 2226 4.514401 GTCCCATGACTAAAAGTAGTGGG 58.486 47.826 17.22 17.22 46.41 4.61
2086 2229 5.422214 CCATGACTAAAAGTAGTGGGACT 57.578 43.478 0.00 0.00 40.82 3.85
2087 2230 6.540438 CCATGACTAAAAGTAGTGGGACTA 57.460 41.667 0.00 0.00 40.82 2.59
2088 2231 6.942976 CCATGACTAAAAGTAGTGGGACTAA 58.057 40.000 0.00 0.00 40.82 2.24
2089 2232 7.391620 CCATGACTAAAAGTAGTGGGACTAAA 58.608 38.462 0.00 0.00 40.82 1.85
2090 2233 7.881232 CCATGACTAAAAGTAGTGGGACTAAAA 59.119 37.037 0.00 0.00 40.82 1.52
2091 2234 8.718734 CATGACTAAAAGTAGTGGGACTAAAAC 58.281 37.037 0.00 0.00 40.82 2.43
2092 2235 8.026396 TGACTAAAAGTAGTGGGACTAAAACT 57.974 34.615 0.00 0.00 40.82 2.66
2093 2236 8.488668 TGACTAAAAGTAGTGGGACTAAAACTT 58.511 33.333 0.00 0.00 40.82 2.66
2094 2237 8.672823 ACTAAAAGTAGTGGGACTAAAACTTG 57.327 34.615 0.00 0.00 39.20 3.16
2095 2238 6.387041 AAAAGTAGTGGGACTAAAACTTGC 57.613 37.500 0.00 0.00 31.62 4.01
2096 2239 4.976540 AGTAGTGGGACTAAAACTTGCT 57.023 40.909 0.00 0.00 31.62 3.91
2097 2240 6.429521 AAGTAGTGGGACTAAAACTTGCTA 57.570 37.500 0.00 0.00 31.62 3.49
2098 2241 6.038997 AGTAGTGGGACTAAAACTTGCTAG 57.961 41.667 0.00 0.00 31.62 3.42
2099 2242 4.976540 AGTGGGACTAAAACTTGCTAGT 57.023 40.909 0.00 0.00 35.68 2.57
2100 2243 4.895961 AGTGGGACTAAAACTTGCTAGTC 58.104 43.478 0.07 0.62 42.17 2.59
2101 2244 4.593634 AGTGGGACTAAAACTTGCTAGTCT 59.406 41.667 0.07 0.00 42.42 3.24
2102 2245 4.930405 GTGGGACTAAAACTTGCTAGTCTC 59.070 45.833 0.07 1.39 43.29 3.36
2103 2246 5.148651 GGGACTAAAACTTGCTAGTCTCA 57.851 43.478 0.07 0.00 42.76 3.27
2104 2247 4.930405 GGGACTAAAACTTGCTAGTCTCAC 59.070 45.833 0.07 0.00 42.76 3.51
2105 2248 4.930405 GGACTAAAACTTGCTAGTCTCACC 59.070 45.833 0.07 0.00 42.42 4.02
2106 2249 4.895961 ACTAAAACTTGCTAGTCTCACCC 58.104 43.478 0.07 0.00 31.99 4.61
2107 2250 3.857157 AAAACTTGCTAGTCTCACCCA 57.143 42.857 0.07 0.00 31.99 4.51
2108 2251 4.373156 AAAACTTGCTAGTCTCACCCAT 57.627 40.909 0.07 0.00 31.99 4.00
2109 2252 3.340814 AACTTGCTAGTCTCACCCATG 57.659 47.619 0.07 0.00 31.99 3.66
2110 2253 1.065854 ACTTGCTAGTCTCACCCATGC 60.066 52.381 0.00 0.00 0.00 4.06
2111 2254 1.209019 CTTGCTAGTCTCACCCATGCT 59.791 52.381 0.00 0.00 0.00 3.79
2112 2255 1.279496 TGCTAGTCTCACCCATGCTT 58.721 50.000 0.00 0.00 0.00 3.91
2113 2256 1.065926 TGCTAGTCTCACCCATGCTTG 60.066 52.381 0.00 0.00 0.00 4.01
2114 2257 1.745141 GCTAGTCTCACCCATGCTTGG 60.745 57.143 11.68 11.68 43.23 3.61
2115 2258 1.833630 CTAGTCTCACCCATGCTTGGA 59.166 52.381 19.85 0.00 46.92 3.53
2116 2259 1.293062 AGTCTCACCCATGCTTGGAT 58.707 50.000 19.85 0.00 46.92 3.41
2117 2260 1.211457 AGTCTCACCCATGCTTGGATC 59.789 52.381 19.85 3.99 46.92 3.36
2118 2261 0.548031 TCTCACCCATGCTTGGATCC 59.452 55.000 19.85 4.20 46.92 3.36
2119 2262 0.256752 CTCACCCATGCTTGGATCCA 59.743 55.000 19.85 11.44 46.92 3.41
2120 2263 0.703488 TCACCCATGCTTGGATCCAA 59.297 50.000 25.53 25.53 46.92 3.53
2121 2264 1.076841 TCACCCATGCTTGGATCCAAA 59.923 47.619 26.87 14.63 46.92 3.28
2122 2265 2.112998 CACCCATGCTTGGATCCAAAT 58.887 47.619 26.87 16.27 46.92 2.32
2123 2266 3.053019 TCACCCATGCTTGGATCCAAATA 60.053 43.478 26.87 18.63 46.92 1.40
2124 2267 3.068590 CACCCATGCTTGGATCCAAATAC 59.931 47.826 26.87 19.00 46.92 1.89
2125 2268 3.052642 ACCCATGCTTGGATCCAAATACT 60.053 43.478 26.87 10.16 46.92 2.12
2126 2269 4.167892 ACCCATGCTTGGATCCAAATACTA 59.832 41.667 26.87 12.31 46.92 1.82
2127 2270 5.139727 CCCATGCTTGGATCCAAATACTAA 58.860 41.667 26.87 10.11 46.92 2.24
2128 2271 5.598005 CCCATGCTTGGATCCAAATACTAAA 59.402 40.000 26.87 8.81 46.92 1.85
2129 2272 6.239120 CCCATGCTTGGATCCAAATACTAAAG 60.239 42.308 26.87 14.21 46.92 1.85
2130 2273 6.547141 CCATGCTTGGATCCAAATACTAAAGA 59.453 38.462 26.87 1.90 46.92 2.52
2131 2274 7.255381 CCATGCTTGGATCCAAATACTAAAGAG 60.255 40.741 26.87 12.80 46.92 2.85
2132 2275 6.957631 TGCTTGGATCCAAATACTAAAGAGA 58.042 36.000 26.87 1.15 35.33 3.10
2133 2276 6.823689 TGCTTGGATCCAAATACTAAAGAGAC 59.176 38.462 26.87 8.83 35.33 3.36
2134 2277 7.051000 GCTTGGATCCAAATACTAAAGAGACT 58.949 38.462 26.87 0.00 35.33 3.24
2135 2278 8.204836 GCTTGGATCCAAATACTAAAGAGACTA 58.795 37.037 26.87 0.00 35.33 2.59
2172 2315 7.654022 TGAACATTTATTATCCTCCAAACCC 57.346 36.000 0.00 0.00 0.00 4.11
2173 2316 7.418378 TGAACATTTATTATCCTCCAAACCCT 58.582 34.615 0.00 0.00 0.00 4.34
2174 2317 7.898636 TGAACATTTATTATCCTCCAAACCCTT 59.101 33.333 0.00 0.00 0.00 3.95
2175 2318 7.898014 ACATTTATTATCCTCCAAACCCTTC 57.102 36.000 0.00 0.00 0.00 3.46
2176 2319 7.418378 ACATTTATTATCCTCCAAACCCTTCA 58.582 34.615 0.00 0.00 0.00 3.02
2177 2320 7.898636 ACATTTATTATCCTCCAAACCCTTCAA 59.101 33.333 0.00 0.00 0.00 2.69
2178 2321 8.927411 CATTTATTATCCTCCAAACCCTTCAAT 58.073 33.333 0.00 0.00 0.00 2.57
2179 2322 8.533569 TTTATTATCCTCCAAACCCTTCAATC 57.466 34.615 0.00 0.00 0.00 2.67
2180 2323 2.899303 TCCTCCAAACCCTTCAATCC 57.101 50.000 0.00 0.00 0.00 3.01
2181 2324 2.069775 TCCTCCAAACCCTTCAATCCA 58.930 47.619 0.00 0.00 0.00 3.41
2182 2325 2.041620 TCCTCCAAACCCTTCAATCCAG 59.958 50.000 0.00 0.00 0.00 3.86
2183 2326 2.041620 CCTCCAAACCCTTCAATCCAGA 59.958 50.000 0.00 0.00 0.00 3.86
2184 2327 3.500289 CCTCCAAACCCTTCAATCCAGAA 60.500 47.826 0.00 0.00 0.00 3.02
2185 2328 3.496331 TCCAAACCCTTCAATCCAGAAC 58.504 45.455 0.00 0.00 0.00 3.01
2186 2329 3.140144 TCCAAACCCTTCAATCCAGAACT 59.860 43.478 0.00 0.00 0.00 3.01
2187 2330 4.352595 TCCAAACCCTTCAATCCAGAACTA 59.647 41.667 0.00 0.00 0.00 2.24
2188 2331 5.076873 CCAAACCCTTCAATCCAGAACTAA 58.923 41.667 0.00 0.00 0.00 2.24
2189 2332 5.183904 CCAAACCCTTCAATCCAGAACTAAG 59.816 44.000 0.00 0.00 0.00 2.18
2190 2333 4.576330 ACCCTTCAATCCAGAACTAAGG 57.424 45.455 0.00 0.00 34.54 2.69
2191 2334 4.175962 ACCCTTCAATCCAGAACTAAGGA 58.824 43.478 0.00 0.00 36.42 3.36
2192 2335 4.226168 ACCCTTCAATCCAGAACTAAGGAG 59.774 45.833 0.00 0.00 37.34 3.69
2193 2336 4.471386 CCCTTCAATCCAGAACTAAGGAGA 59.529 45.833 0.00 0.00 37.34 3.71
2194 2337 5.396213 CCCTTCAATCCAGAACTAAGGAGAG 60.396 48.000 0.00 0.00 37.34 3.20
2195 2338 5.396213 CCTTCAATCCAGAACTAAGGAGAGG 60.396 48.000 0.00 0.00 37.34 3.69
2196 2339 4.947883 TCAATCCAGAACTAAGGAGAGGA 58.052 43.478 0.00 0.00 37.34 3.71
2197 2340 5.342017 TCAATCCAGAACTAAGGAGAGGAA 58.658 41.667 0.00 0.00 37.34 3.36
2198 2341 5.966935 TCAATCCAGAACTAAGGAGAGGAAT 59.033 40.000 0.00 0.00 37.34 3.01
2199 2342 6.445139 TCAATCCAGAACTAAGGAGAGGAATT 59.555 38.462 0.00 0.00 37.34 2.17
2200 2343 7.623677 TCAATCCAGAACTAAGGAGAGGAATTA 59.376 37.037 0.00 0.00 37.34 1.40
2201 2344 7.996758 ATCCAGAACTAAGGAGAGGAATTAA 57.003 36.000 0.00 0.00 37.34 1.40
2202 2345 7.808279 TCCAGAACTAAGGAGAGGAATTAAA 57.192 36.000 0.00 0.00 0.00 1.52
2203 2346 8.393959 TCCAGAACTAAGGAGAGGAATTAAAT 57.606 34.615 0.00 0.00 0.00 1.40
2204 2347 8.267894 TCCAGAACTAAGGAGAGGAATTAAATG 58.732 37.037 0.00 0.00 0.00 2.32
2205 2348 8.267894 CCAGAACTAAGGAGAGGAATTAAATGA 58.732 37.037 0.00 0.00 0.00 2.57
2206 2349 9.323985 CAGAACTAAGGAGAGGAATTAAATGAG 57.676 37.037 0.00 0.00 0.00 2.90
2207 2350 8.490311 AGAACTAAGGAGAGGAATTAAATGAGG 58.510 37.037 0.00 0.00 0.00 3.86
2208 2351 7.996758 ACTAAGGAGAGGAATTAAATGAGGA 57.003 36.000 0.00 0.00 0.00 3.71
2209 2352 8.028652 ACTAAGGAGAGGAATTAAATGAGGAG 57.971 38.462 0.00 0.00 0.00 3.69
2210 2353 7.846823 ACTAAGGAGAGGAATTAAATGAGGAGA 59.153 37.037 0.00 0.00 0.00 3.71
2211 2354 6.745794 AGGAGAGGAATTAAATGAGGAGAG 57.254 41.667 0.00 0.00 0.00 3.20
2212 2355 6.448202 AGGAGAGGAATTAAATGAGGAGAGA 58.552 40.000 0.00 0.00 0.00 3.10
2213 2356 6.554605 AGGAGAGGAATTAAATGAGGAGAGAG 59.445 42.308 0.00 0.00 0.00 3.20
2214 2357 6.553100 GGAGAGGAATTAAATGAGGAGAGAGA 59.447 42.308 0.00 0.00 0.00 3.10
2215 2358 7.255942 GGAGAGGAATTAAATGAGGAGAGAGAG 60.256 44.444 0.00 0.00 0.00 3.20
2216 2359 7.361438 AGAGGAATTAAATGAGGAGAGAGAGA 58.639 38.462 0.00 0.00 0.00 3.10
2217 2360 7.506938 AGAGGAATTAAATGAGGAGAGAGAGAG 59.493 40.741 0.00 0.00 0.00 3.20
2218 2361 6.041979 AGGAATTAAATGAGGAGAGAGAGAGC 59.958 42.308 0.00 0.00 0.00 4.09
2219 2362 6.041979 GGAATTAAATGAGGAGAGAGAGAGCT 59.958 42.308 0.00 0.00 0.00 4.09
2220 2363 7.232534 GGAATTAAATGAGGAGAGAGAGAGCTA 59.767 40.741 0.00 0.00 0.00 3.32
2221 2364 8.546083 AATTAAATGAGGAGAGAGAGAGCTAA 57.454 34.615 0.00 0.00 0.00 3.09
2222 2365 8.725606 ATTAAATGAGGAGAGAGAGAGCTAAT 57.274 34.615 0.00 0.00 0.00 1.73
2223 2366 9.821240 ATTAAATGAGGAGAGAGAGAGCTAATA 57.179 33.333 0.00 0.00 0.00 0.98
2224 2367 7.524717 AAATGAGGAGAGAGAGAGCTAATAC 57.475 40.000 0.00 0.00 0.00 1.89
2225 2368 5.638530 TGAGGAGAGAGAGAGCTAATACA 57.361 43.478 0.00 0.00 0.00 2.29
2226 2369 6.199557 TGAGGAGAGAGAGAGCTAATACAT 57.800 41.667 0.00 0.00 0.00 2.29
2227 2370 7.323052 TGAGGAGAGAGAGAGCTAATACATA 57.677 40.000 0.00 0.00 0.00 2.29
2228 2371 7.927788 TGAGGAGAGAGAGAGCTAATACATAT 58.072 38.462 0.00 0.00 0.00 1.78
2229 2372 8.390143 TGAGGAGAGAGAGAGCTAATACATATT 58.610 37.037 0.00 0.00 0.00 1.28
2230 2373 9.243105 GAGGAGAGAGAGAGCTAATACATATTT 57.757 37.037 0.00 0.00 0.00 1.40
2231 2374 9.600432 AGGAGAGAGAGAGCTAATACATATTTT 57.400 33.333 0.00 0.00 0.00 1.82
2248 2391 8.747538 ACATATTTTAGTAGGTTTCCCATGAC 57.252 34.615 0.00 0.00 0.00 3.06
2249 2392 8.557450 ACATATTTTAGTAGGTTTCCCATGACT 58.443 33.333 0.00 0.00 0.00 3.41
2253 2396 9.816787 ATTTTAGTAGGTTTCCCATGACTAAAA 57.183 29.630 19.00 19.00 45.07 1.52
2254 2397 8.857694 TTTAGTAGGTTTCCCATGACTAAAAG 57.142 34.615 8.74 0.00 38.44 2.27
2255 2398 6.697641 AGTAGGTTTCCCATGACTAAAAGA 57.302 37.500 0.00 0.00 0.00 2.52
2256 2399 7.272144 AGTAGGTTTCCCATGACTAAAAGAT 57.728 36.000 0.00 0.00 0.00 2.40
2257 2400 7.699878 AGTAGGTTTCCCATGACTAAAAGATT 58.300 34.615 0.00 0.00 0.00 2.40
2258 2401 8.170730 AGTAGGTTTCCCATGACTAAAAGATTT 58.829 33.333 0.00 0.00 0.00 2.17
2259 2402 7.855784 AGGTTTCCCATGACTAAAAGATTTT 57.144 32.000 0.00 0.00 0.00 1.82
2260 2403 8.950007 AGGTTTCCCATGACTAAAAGATTTTA 57.050 30.769 0.00 0.00 0.00 1.52
2274 2417 9.660180 CTAAAAGATTTTAGCCTCAAGACTAGT 57.340 33.333 11.10 0.00 41.97 2.57
2275 2418 8.554835 AAAAGATTTTAGCCTCAAGACTAGTC 57.445 34.615 15.41 15.41 0.00 2.59
2276 2419 6.228616 AGATTTTAGCCTCAAGACTAGTCC 57.771 41.667 19.38 2.89 0.00 3.85
2277 2420 5.961421 AGATTTTAGCCTCAAGACTAGTCCT 59.039 40.000 19.38 10.36 0.00 3.85
2278 2421 7.126733 AGATTTTAGCCTCAAGACTAGTCCTA 58.873 38.462 19.38 9.39 0.00 2.94
2279 2422 6.777213 TTTTAGCCTCAAGACTAGTCCTAG 57.223 41.667 19.38 13.33 39.04 3.02
2280 2423 2.661718 AGCCTCAAGACTAGTCCTAGC 58.338 52.381 19.38 14.54 36.66 3.42
2281 2424 1.684450 GCCTCAAGACTAGTCCTAGCC 59.316 57.143 19.38 0.89 36.66 3.93
2282 2425 2.688515 GCCTCAAGACTAGTCCTAGCCT 60.689 54.545 19.38 0.00 36.66 4.58
2283 2426 3.219281 CCTCAAGACTAGTCCTAGCCTC 58.781 54.545 19.38 0.00 36.66 4.70
2284 2427 3.117663 CCTCAAGACTAGTCCTAGCCTCT 60.118 52.174 19.38 0.00 36.66 3.69
2285 2428 4.532834 CTCAAGACTAGTCCTAGCCTCTT 58.467 47.826 19.38 1.65 36.66 2.85
2286 2429 4.936802 TCAAGACTAGTCCTAGCCTCTTT 58.063 43.478 19.38 0.91 36.66 2.52
2287 2430 5.334421 TCAAGACTAGTCCTAGCCTCTTTT 58.666 41.667 19.38 0.17 36.66 2.27
2288 2431 5.780793 TCAAGACTAGTCCTAGCCTCTTTTT 59.219 40.000 19.38 0.00 36.66 1.94
2289 2432 6.952358 TCAAGACTAGTCCTAGCCTCTTTTTA 59.048 38.462 19.38 0.00 36.66 1.52
2290 2433 7.122948 TCAAGACTAGTCCTAGCCTCTTTTTAG 59.877 40.741 19.38 0.00 36.66 1.85
2291 2434 6.495847 AGACTAGTCCTAGCCTCTTTTTAGT 58.504 40.000 19.38 0.00 36.66 2.24
2292 2435 6.604396 AGACTAGTCCTAGCCTCTTTTTAGTC 59.396 42.308 19.38 0.00 36.66 2.59
2293 2436 6.254522 ACTAGTCCTAGCCTCTTTTTAGTCA 58.745 40.000 1.22 0.00 36.66 3.41
2294 2437 5.669164 AGTCCTAGCCTCTTTTTAGTCAG 57.331 43.478 0.00 0.00 0.00 3.51
2295 2438 4.468153 AGTCCTAGCCTCTTTTTAGTCAGG 59.532 45.833 0.00 0.00 0.00 3.86
2296 2439 3.775316 TCCTAGCCTCTTTTTAGTCAGGG 59.225 47.826 0.00 0.00 0.00 4.45
2297 2440 3.118223 CCTAGCCTCTTTTTAGTCAGGGG 60.118 52.174 0.00 0.00 33.13 4.79
2298 2441 2.349445 AGCCTCTTTTTAGTCAGGGGT 58.651 47.619 0.00 0.00 32.47 4.95
2299 2442 2.040412 AGCCTCTTTTTAGTCAGGGGTG 59.960 50.000 0.00 0.00 32.47 4.61
2300 2443 2.437413 CCTCTTTTTAGTCAGGGGTGC 58.563 52.381 0.00 0.00 0.00 5.01
2301 2444 2.040412 CCTCTTTTTAGTCAGGGGTGCT 59.960 50.000 0.00 0.00 0.00 4.40
2302 2445 3.498661 CCTCTTTTTAGTCAGGGGTGCTT 60.499 47.826 0.00 0.00 0.00 3.91
2303 2446 3.486383 TCTTTTTAGTCAGGGGTGCTTG 58.514 45.455 0.00 0.00 0.00 4.01
2304 2447 2.286365 TTTTAGTCAGGGGTGCTTGG 57.714 50.000 0.00 0.00 0.00 3.61
2305 2448 1.440618 TTTAGTCAGGGGTGCTTGGA 58.559 50.000 0.00 0.00 0.00 3.53
2306 2449 1.440618 TTAGTCAGGGGTGCTTGGAA 58.559 50.000 0.00 0.00 0.00 3.53
2307 2450 0.690762 TAGTCAGGGGTGCTTGGAAC 59.309 55.000 0.00 0.00 0.00 3.62
2308 2451 1.062488 AGTCAGGGGTGCTTGGAACT 61.062 55.000 0.00 0.00 0.00 3.01
2309 2452 0.178990 GTCAGGGGTGCTTGGAACTT 60.179 55.000 0.00 0.00 0.00 2.66
2310 2453 0.555769 TCAGGGGTGCTTGGAACTTT 59.444 50.000 0.00 0.00 0.00 2.66
2311 2454 1.777878 TCAGGGGTGCTTGGAACTTTA 59.222 47.619 0.00 0.00 0.00 1.85
2312 2455 2.162681 CAGGGGTGCTTGGAACTTTAG 58.837 52.381 0.00 0.00 0.00 1.85
2313 2456 0.888619 GGGGTGCTTGGAACTTTAGC 59.111 55.000 0.00 0.00 35.50 3.09
2314 2457 0.888619 GGGTGCTTGGAACTTTAGCC 59.111 55.000 0.00 0.00 34.03 3.93
2315 2458 1.547901 GGGTGCTTGGAACTTTAGCCT 60.548 52.381 0.00 0.00 34.03 4.58
2316 2459 1.813178 GGTGCTTGGAACTTTAGCCTC 59.187 52.381 0.00 0.00 34.03 4.70
2317 2460 2.553247 GGTGCTTGGAACTTTAGCCTCT 60.553 50.000 0.00 0.00 34.03 3.69
2318 2461 3.307480 GGTGCTTGGAACTTTAGCCTCTA 60.307 47.826 0.00 0.00 34.03 2.43
2319 2462 4.324267 GTGCTTGGAACTTTAGCCTCTAA 58.676 43.478 0.00 0.00 34.03 2.10
2320 2463 4.760204 GTGCTTGGAACTTTAGCCTCTAAA 59.240 41.667 0.00 0.00 34.03 1.85
2321 2464 5.240844 GTGCTTGGAACTTTAGCCTCTAAAA 59.759 40.000 0.00 0.00 34.03 1.52
2322 2465 5.473504 TGCTTGGAACTTTAGCCTCTAAAAG 59.526 40.000 0.00 0.00 38.41 2.27
2323 2466 5.705905 GCTTGGAACTTTAGCCTCTAAAAGA 59.294 40.000 2.08 0.00 36.43 2.52
2324 2467 6.128145 GCTTGGAACTTTAGCCTCTAAAAGAG 60.128 42.308 2.08 0.00 41.96 2.85
2325 2468 6.681729 TGGAACTTTAGCCTCTAAAAGAGA 57.318 37.500 5.50 0.00 45.07 3.10
2326 2469 6.465084 TGGAACTTTAGCCTCTAAAAGAGAC 58.535 40.000 5.50 0.00 45.07 3.36
2327 2470 6.270231 TGGAACTTTAGCCTCTAAAAGAGACT 59.730 38.462 5.50 1.89 45.07 3.24
2328 2471 7.453752 TGGAACTTTAGCCTCTAAAAGAGACTA 59.546 37.037 5.50 0.91 45.07 2.59
2329 2472 8.479689 GGAACTTTAGCCTCTAAAAGAGACTAT 58.520 37.037 5.50 0.00 45.07 2.12
2330 2473 9.878667 GAACTTTAGCCTCTAAAAGAGACTATT 57.121 33.333 5.50 0.00 45.07 1.73
2337 2480 9.878667 AGCCTCTAAAAGAGACTATTTTTAGTC 57.121 33.333 12.70 5.24 45.07 2.59
2338 2481 9.654663 GCCTCTAAAAGAGACTATTTTTAGTCA 57.345 33.333 12.70 4.01 45.07 3.41
2357 2500 9.720769 TTTAGTCAGACTAAAAATAGTCCCTTG 57.279 33.333 26.93 5.29 44.84 3.61
2358 2501 7.317722 AGTCAGACTAAAAATAGTCCCTTGT 57.682 36.000 0.00 0.00 45.66 3.16
2359 2502 8.431910 AGTCAGACTAAAAATAGTCCCTTGTA 57.568 34.615 0.00 0.00 45.66 2.41
2360 2503 9.047947 AGTCAGACTAAAAATAGTCCCTTGTAT 57.952 33.333 0.00 0.00 45.66 2.29
2361 2504 9.315525 GTCAGACTAAAAATAGTCCCTTGTATC 57.684 37.037 11.35 0.00 45.66 2.24
2362 2505 8.483758 TCAGACTAAAAATAGTCCCTTGTATCC 58.516 37.037 11.35 0.00 45.66 2.59
2363 2506 8.265055 CAGACTAAAAATAGTCCCTTGTATCCA 58.735 37.037 11.35 0.00 45.66 3.41
2364 2507 8.832735 AGACTAAAAATAGTCCCTTGTATCCAA 58.167 33.333 11.35 0.00 45.66 3.53
2365 2508 9.110502 GACTAAAAATAGTCCCTTGTATCCAAG 57.889 37.037 4.96 0.00 40.86 3.61
2366 2509 6.775594 AAAAATAGTCCCTTGTATCCAAGC 57.224 37.500 0.00 0.00 45.57 4.01
2367 2510 5.450818 AAATAGTCCCTTGTATCCAAGCA 57.549 39.130 0.00 0.00 45.57 3.91
2368 2511 2.789409 AGTCCCTTGTATCCAAGCAC 57.211 50.000 0.00 0.00 45.57 4.40
2369 2512 1.282157 AGTCCCTTGTATCCAAGCACC 59.718 52.381 0.00 0.00 45.57 5.01
2370 2513 0.623723 TCCCTTGTATCCAAGCACCC 59.376 55.000 0.00 0.00 45.57 4.61
2371 2514 0.625849 CCCTTGTATCCAAGCACCCT 59.374 55.000 0.00 0.00 45.57 4.34
2372 2515 1.408822 CCCTTGTATCCAAGCACCCTC 60.409 57.143 0.00 0.00 45.57 4.30
2373 2516 1.561542 CCTTGTATCCAAGCACCCTCT 59.438 52.381 0.00 0.00 45.57 3.69
2374 2517 2.025887 CCTTGTATCCAAGCACCCTCTT 60.026 50.000 0.00 0.00 45.57 2.85
2375 2518 3.199946 CCTTGTATCCAAGCACCCTCTTA 59.800 47.826 0.00 0.00 45.57 2.10
2381 2524 0.815615 CAAGCACCCTCTTATCCCGC 60.816 60.000 0.00 0.00 0.00 6.13
2403 2546 2.034879 CAAGCATTGGAGACCGCGT 61.035 57.895 4.92 0.00 43.94 6.01
2488 2631 4.402056 AACTGTTGTCTATACCCATCCG 57.598 45.455 0.00 0.00 0.00 4.18
2520 2663 5.504853 TCATTATGCACAATACCACCTCAA 58.495 37.500 0.00 0.00 0.00 3.02
2551 2694 1.439679 GGTCTCAACCAATCGACACC 58.560 55.000 0.00 0.00 45.68 4.16
2679 2822 7.758820 TTTTCCTCACCACTCCCTATTTATA 57.241 36.000 0.00 0.00 0.00 0.98
2689 2832 7.127339 ACCACTCCCTATTTATATTGTCACAGT 59.873 37.037 0.00 0.00 0.00 3.55
2713 2856 9.331282 AGTTGTTCCTAGATCATGTTAATTAGC 57.669 33.333 0.00 0.00 0.00 3.09
2730 2873 8.565416 GTTAATTAGCGGGCTTAATACATTCTT 58.435 33.333 0.00 0.00 0.00 2.52
2731 2874 7.582667 AATTAGCGGGCTTAATACATTCTTT 57.417 32.000 0.00 0.00 0.00 2.52
2732 2875 7.582667 ATTAGCGGGCTTAATACATTCTTTT 57.417 32.000 0.00 0.00 0.00 2.27
2733 2876 5.914898 AGCGGGCTTAATACATTCTTTTT 57.085 34.783 0.00 0.00 0.00 1.94
3082 6562 3.567478 ATCCTCCTAATCCACAAGCAC 57.433 47.619 0.00 0.00 0.00 4.40
3094 6574 5.235850 TCCACAAGCACTTTGATAAGGTA 57.764 39.130 0.00 0.00 39.21 3.08
3330 6842 7.867403 ACATGTGAAATGTTATTGTGGTCTTTC 59.133 33.333 0.00 0.00 0.00 2.62
3374 6886 5.999205 TTTTTGGCACACCTATTGATCAT 57.001 34.783 0.00 0.00 39.29 2.45
3541 7056 2.582636 AGAATAATGGGCTGGAGTTGGT 59.417 45.455 0.00 0.00 0.00 3.67
3593 7108 3.960102 AGGAACCATCAAAGCAAGAACAA 59.040 39.130 0.00 0.00 0.00 2.83
3678 7193 9.569122 ACAACACTAACAAGGTAAAGATTATGT 57.431 29.630 0.00 0.00 0.00 2.29
3696 7211 8.908903 AGATTATGTTGGGCAAAATAAATACGA 58.091 29.630 0.00 0.00 35.00 3.43
3697 7212 9.691362 GATTATGTTGGGCAAAATAAATACGAT 57.309 29.630 0.00 0.00 35.00 3.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.870363 TGCACTAAAATCTTGGCAAGTTC 58.130 39.130 25.39 1.64 0.00 3.01
2 3 4.523943 TGATGCACTAAAATCTTGGCAAGT 59.476 37.500 25.39 11.29 34.64 3.16
4 5 5.465532 TTGATGCACTAAAATCTTGGCAA 57.534 34.783 0.00 0.00 34.64 4.52
5 6 5.664294 ATTGATGCACTAAAATCTTGGCA 57.336 34.783 0.00 0.00 35.54 4.92
6 7 9.918630 ATTATATTGATGCACTAAAATCTTGGC 57.081 29.630 0.00 0.00 0.00 4.52
17 18 8.017373 GCACGTTCATTATTATATTGATGCACT 58.983 33.333 12.45 0.00 29.19 4.40
18 19 7.802720 TGCACGTTCATTATTATATTGATGCAC 59.197 33.333 14.54 4.63 31.83 4.57
19 20 7.869800 TGCACGTTCATTATTATATTGATGCA 58.130 30.769 14.54 14.54 33.15 3.96
20 21 8.017373 ACTGCACGTTCATTATTATATTGATGC 58.983 33.333 11.27 11.27 0.00 3.91
21 22 9.882996 AACTGCACGTTCATTATTATATTGATG 57.117 29.630 0.00 0.00 0.00 3.07
24 25 9.301606 CGTAACTGCACGTTCATTATTATATTG 57.698 33.333 5.04 0.00 37.05 1.90
25 26 8.492748 CCGTAACTGCACGTTCATTATTATATT 58.507 33.333 5.04 0.00 40.31 1.28
26 27 7.117236 CCCGTAACTGCACGTTCATTATTATAT 59.883 37.037 5.04 0.00 40.31 0.86
27 28 6.421501 CCCGTAACTGCACGTTCATTATTATA 59.578 38.462 5.04 0.00 40.31 0.98
28 29 5.235616 CCCGTAACTGCACGTTCATTATTAT 59.764 40.000 5.04 0.00 40.31 1.28
29 30 4.567558 CCCGTAACTGCACGTTCATTATTA 59.432 41.667 5.04 0.00 40.31 0.98
30 31 3.372822 CCCGTAACTGCACGTTCATTATT 59.627 43.478 5.04 0.00 40.31 1.40
31 32 2.933906 CCCGTAACTGCACGTTCATTAT 59.066 45.455 5.04 0.00 40.31 1.28
32 33 2.339418 CCCGTAACTGCACGTTCATTA 58.661 47.619 5.04 0.00 40.31 1.90
33 34 1.153353 CCCGTAACTGCACGTTCATT 58.847 50.000 5.04 0.00 40.31 2.57
34 35 1.296056 GCCCGTAACTGCACGTTCAT 61.296 55.000 5.04 0.00 40.31 2.57
35 36 1.957186 GCCCGTAACTGCACGTTCA 60.957 57.895 5.04 0.00 40.31 3.18
36 37 0.388907 TAGCCCGTAACTGCACGTTC 60.389 55.000 5.04 0.00 40.31 3.95
37 38 0.033781 TTAGCCCGTAACTGCACGTT 59.966 50.000 6.74 6.74 40.31 3.99
38 39 0.248289 ATTAGCCCGTAACTGCACGT 59.752 50.000 0.00 0.00 40.31 4.49
39 40 0.928229 GATTAGCCCGTAACTGCACG 59.072 55.000 0.00 0.00 41.59 5.34
40 41 2.202566 GAGATTAGCCCGTAACTGCAC 58.797 52.381 0.00 0.00 0.00 4.57
41 42 1.138266 GGAGATTAGCCCGTAACTGCA 59.862 52.381 0.00 0.00 0.00 4.41
42 43 1.540580 GGGAGATTAGCCCGTAACTGC 60.541 57.143 0.00 0.00 35.50 4.40
43 44 2.528041 GGGAGATTAGCCCGTAACTG 57.472 55.000 0.00 0.00 35.50 3.16
50 51 6.779860 TCTATAAACATTGGGAGATTAGCCC 58.220 40.000 0.00 0.00 46.22 5.19
51 52 7.680730 TCTCTATAAACATTGGGAGATTAGCC 58.319 38.462 0.00 0.00 0.00 3.93
52 53 9.561069 TTTCTCTATAAACATTGGGAGATTAGC 57.439 33.333 0.00 0.00 31.32 3.09
90 91 4.455877 GGGACCAGATTTTAAGACAGTGTG 59.544 45.833 0.00 0.00 0.00 3.82
111 112 6.405278 AACTTTTCCAGTGTCAAATAAGGG 57.595 37.500 0.00 0.00 35.12 3.95
180 181 2.352127 GGCTCAAAATGGACAGAAGTGC 60.352 50.000 0.00 0.00 36.51 4.40
272 276 3.716006 GCGCGTGCACTCACACAT 61.716 61.111 17.66 0.00 43.28 3.21
452 534 0.110010 CGCACACACACAACAACACA 60.110 50.000 0.00 0.00 0.00 3.72
457 539 1.231296 ACACACGCACACACACAACA 61.231 50.000 0.00 0.00 0.00 3.33
458 540 0.792729 CACACACGCACACACACAAC 60.793 55.000 0.00 0.00 0.00 3.32
459 541 1.231296 ACACACACGCACACACACAA 61.231 50.000 0.00 0.00 0.00 3.33
460 542 1.669437 ACACACACGCACACACACA 60.669 52.632 0.00 0.00 0.00 3.72
461 543 1.225991 CACACACACGCACACACAC 60.226 57.895 0.00 0.00 0.00 3.82
462 544 1.669437 ACACACACACGCACACACA 60.669 52.632 0.00 0.00 0.00 3.72
516 616 1.836510 TATGCACCAACACACGCACG 61.837 55.000 0.00 0.00 37.17 5.34
517 617 0.521291 ATATGCACCAACACACGCAC 59.479 50.000 0.00 0.00 37.17 5.34
518 618 0.520847 CATATGCACCAACACACGCA 59.479 50.000 0.00 0.00 39.01 5.24
519 619 0.521291 ACATATGCACCAACACACGC 59.479 50.000 1.58 0.00 0.00 5.34
520 620 3.373748 ACATACATATGCACCAACACACG 59.626 43.478 1.58 0.00 37.19 4.49
535 635 1.197492 CACACGCAGCAACACATACAT 59.803 47.619 0.00 0.00 0.00 2.29
577 677 1.401409 GCAATAGCACACACACGCATT 60.401 47.619 0.00 0.00 41.58 3.56
578 678 0.168788 GCAATAGCACACACACGCAT 59.831 50.000 0.00 0.00 41.58 4.73
612 712 1.425066 ACTCTTTTGCCCCTCATGTGA 59.575 47.619 0.00 0.00 0.00 3.58
661 763 9.432982 TTTATTCCCTATATGGCATTTCTGTTT 57.567 29.630 4.78 0.00 0.00 2.83
783 885 3.936902 GCGATTGCAACGGAGTATAAA 57.063 42.857 18.46 0.00 45.00 1.40
799 901 2.023414 CTGCCAATTGCCCATGCGAT 62.023 55.000 0.00 0.00 43.74 4.58
800 902 2.679287 TGCCAATTGCCCATGCGA 60.679 55.556 0.00 0.00 41.78 5.10
801 903 2.202824 CTGCCAATTGCCCATGCG 60.203 61.111 0.00 0.00 41.78 4.73
802 904 1.153509 GACTGCCAATTGCCCATGC 60.154 57.895 0.00 0.00 40.16 4.06
803 905 0.609151 TTGACTGCCAATTGCCCATG 59.391 50.000 0.00 0.00 40.16 3.66
804 906 1.208535 CATTGACTGCCAATTGCCCAT 59.791 47.619 0.00 0.00 42.55 4.00
805 907 0.609151 CATTGACTGCCAATTGCCCA 59.391 50.000 0.00 0.00 42.55 5.36
806 908 0.609662 ACATTGACTGCCAATTGCCC 59.390 50.000 0.00 0.00 42.55 5.36
807 909 3.806625 ATACATTGACTGCCAATTGCC 57.193 42.857 0.00 0.00 42.55 4.52
808 910 7.623770 CATTTTATACATTGACTGCCAATTGC 58.376 34.615 0.00 0.00 42.55 3.56
809 911 7.278203 TGCATTTTATACATTGACTGCCAATTG 59.722 33.333 0.00 0.00 42.55 2.32
810 912 7.329499 TGCATTTTATACATTGACTGCCAATT 58.671 30.769 0.00 0.00 42.55 2.32
811 913 6.876155 TGCATTTTATACATTGACTGCCAAT 58.124 32.000 0.00 0.00 45.88 3.16
812 914 6.278172 TGCATTTTATACATTGACTGCCAA 57.722 33.333 0.00 0.00 39.41 4.52
813 915 5.911378 TGCATTTTATACATTGACTGCCA 57.089 34.783 0.00 0.00 0.00 4.92
814 916 7.545265 TCTTTTGCATTTTATACATTGACTGCC 59.455 33.333 0.00 0.00 0.00 4.85
815 917 8.464770 TCTTTTGCATTTTATACATTGACTGC 57.535 30.769 0.00 0.00 0.00 4.40
817 919 9.643693 CCTTCTTTTGCATTTTATACATTGACT 57.356 29.630 0.00 0.00 0.00 3.41
818 920 9.638239 TCCTTCTTTTGCATTTTATACATTGAC 57.362 29.630 0.00 0.00 0.00 3.18
821 923 9.154847 GCTTCCTTCTTTTGCATTTTATACATT 57.845 29.630 0.00 0.00 0.00 2.71
822 924 8.313292 TGCTTCCTTCTTTTGCATTTTATACAT 58.687 29.630 0.00 0.00 0.00 2.29
823 925 7.598493 GTGCTTCCTTCTTTTGCATTTTATACA 59.402 33.333 0.00 0.00 36.04 2.29
824 926 7.598493 TGTGCTTCCTTCTTTTGCATTTTATAC 59.402 33.333 0.00 0.00 36.04 1.47
825 927 7.598493 GTGTGCTTCCTTCTTTTGCATTTTATA 59.402 33.333 0.00 0.00 36.04 0.98
826 928 6.424812 GTGTGCTTCCTTCTTTTGCATTTTAT 59.575 34.615 0.00 0.00 36.04 1.40
827 929 5.752955 GTGTGCTTCCTTCTTTTGCATTTTA 59.247 36.000 0.00 0.00 36.04 1.52
828 930 4.571984 GTGTGCTTCCTTCTTTTGCATTTT 59.428 37.500 0.00 0.00 36.04 1.82
829 931 4.122046 GTGTGCTTCCTTCTTTTGCATTT 58.878 39.130 0.00 0.00 36.04 2.32
830 932 3.132646 TGTGTGCTTCCTTCTTTTGCATT 59.867 39.130 0.00 0.00 36.04 3.56
831 933 2.694628 TGTGTGCTTCCTTCTTTTGCAT 59.305 40.909 0.00 0.00 36.04 3.96
832 934 2.098614 TGTGTGCTTCCTTCTTTTGCA 58.901 42.857 0.00 0.00 0.00 4.08
833 935 2.869233 TGTGTGCTTCCTTCTTTTGC 57.131 45.000 0.00 0.00 0.00 3.68
834 936 4.741676 GTGAATGTGTGCTTCCTTCTTTTG 59.258 41.667 0.00 0.00 0.00 2.44
835 937 4.202151 GGTGAATGTGTGCTTCCTTCTTTT 60.202 41.667 0.00 0.00 0.00 2.27
836 938 3.319122 GGTGAATGTGTGCTTCCTTCTTT 59.681 43.478 0.00 0.00 0.00 2.52
837 939 2.887152 GGTGAATGTGTGCTTCCTTCTT 59.113 45.455 0.00 0.00 0.00 2.52
838 940 2.158623 TGGTGAATGTGTGCTTCCTTCT 60.159 45.455 0.00 0.00 0.00 2.85
839 941 2.229792 TGGTGAATGTGTGCTTCCTTC 58.770 47.619 0.00 0.00 0.00 3.46
840 942 2.363306 TGGTGAATGTGTGCTTCCTT 57.637 45.000 0.00 0.00 0.00 3.36
841 943 2.040813 AGATGGTGAATGTGTGCTTCCT 59.959 45.455 0.00 0.00 0.00 3.36
842 944 2.421424 GAGATGGTGAATGTGTGCTTCC 59.579 50.000 0.00 0.00 0.00 3.46
843 945 3.076621 TGAGATGGTGAATGTGTGCTTC 58.923 45.455 0.00 0.00 0.00 3.86
844 946 3.144657 TGAGATGGTGAATGTGTGCTT 57.855 42.857 0.00 0.00 0.00 3.91
845 947 2.865119 TGAGATGGTGAATGTGTGCT 57.135 45.000 0.00 0.00 0.00 4.40
846 948 3.254166 AGTTTGAGATGGTGAATGTGTGC 59.746 43.478 0.00 0.00 0.00 4.57
847 949 4.083110 GGAGTTTGAGATGGTGAATGTGTG 60.083 45.833 0.00 0.00 0.00 3.82
848 950 4.074970 GGAGTTTGAGATGGTGAATGTGT 58.925 43.478 0.00 0.00 0.00 3.72
849 951 3.441572 GGGAGTTTGAGATGGTGAATGTG 59.558 47.826 0.00 0.00 0.00 3.21
850 952 3.074390 TGGGAGTTTGAGATGGTGAATGT 59.926 43.478 0.00 0.00 0.00 2.71
851 953 3.689347 TGGGAGTTTGAGATGGTGAATG 58.311 45.455 0.00 0.00 0.00 2.67
852 954 4.082125 GTTGGGAGTTTGAGATGGTGAAT 58.918 43.478 0.00 0.00 0.00 2.57
867 969 1.475682 GTAGTACCGGTGAGTTGGGAG 59.524 57.143 19.93 0.00 0.00 4.30
881 983 1.379527 GGCATTGCCTGGTGTAGTAC 58.620 55.000 20.66 0.00 46.69 2.73
882 984 3.873781 GGCATTGCCTGGTGTAGTA 57.126 52.632 20.66 0.00 46.69 1.82
893 995 3.207669 CGAGGAGCAGGGCATTGC 61.208 66.667 0.00 0.00 44.41 3.56
894 996 1.817099 GACGAGGAGCAGGGCATTG 60.817 63.158 0.00 0.00 0.00 2.82
895 997 1.630126 ATGACGAGGAGCAGGGCATT 61.630 55.000 0.00 0.00 0.00 3.56
941 1044 9.696917 ATTAAGAAACACAAGATGGTGAATTTC 57.303 29.630 0.00 1.60 41.32 2.17
984 1087 1.079819 CATCCTGCGTTCCACTCGT 60.080 57.895 0.00 0.00 0.00 4.18
1356 1478 2.036256 ATGTGGCCACCCAGCTTC 59.964 61.111 32.62 6.06 43.18 3.86
1636 1758 3.423154 GCAGGAAACGGAGGCACG 61.423 66.667 0.00 0.00 40.31 5.34
1819 1941 1.026718 ACCAGCGAGCCATTAGTTGC 61.027 55.000 0.00 0.00 0.00 4.17
1880 2002 2.182537 CAATCAGCTTTGGCGGCC 59.817 61.111 13.32 13.32 44.37 6.13
2039 2182 6.292919 GGACTAAAACGTATCCAATCATGCTC 60.293 42.308 0.00 0.00 0.00 4.26
2040 2183 5.527582 GGACTAAAACGTATCCAATCATGCT 59.472 40.000 0.00 0.00 0.00 3.79
2041 2184 5.277828 GGGACTAAAACGTATCCAATCATGC 60.278 44.000 0.00 0.00 32.45 4.06
2042 2185 5.820423 TGGGACTAAAACGTATCCAATCATG 59.180 40.000 0.00 0.00 32.45 3.07
2043 2186 5.996644 TGGGACTAAAACGTATCCAATCAT 58.003 37.500 0.00 0.00 32.45 2.45
2044 2187 5.423704 TGGGACTAAAACGTATCCAATCA 57.576 39.130 0.00 0.00 32.45 2.57
2045 2188 6.018180 GTCATGGGACTAAAACGTATCCAATC 60.018 42.308 0.00 0.00 40.99 2.67
2046 2189 5.820947 GTCATGGGACTAAAACGTATCCAAT 59.179 40.000 0.00 0.00 40.99 3.16
2047 2190 5.180271 GTCATGGGACTAAAACGTATCCAA 58.820 41.667 0.00 0.00 40.99 3.53
2048 2191 4.761975 GTCATGGGACTAAAACGTATCCA 58.238 43.478 0.00 0.00 40.99 3.41
2063 2206 4.225267 AGTCCCACTACTTTTAGTCATGGG 59.775 45.833 16.70 16.70 46.94 4.00
2064 2207 5.422214 AGTCCCACTACTTTTAGTCATGG 57.578 43.478 0.00 0.00 36.31 3.66
2065 2208 8.718734 GTTTTAGTCCCACTACTTTTAGTCATG 58.281 37.037 0.00 0.00 36.31 3.07
2066 2209 8.657712 AGTTTTAGTCCCACTACTTTTAGTCAT 58.342 33.333 0.00 0.00 36.31 3.06
2067 2210 8.026396 AGTTTTAGTCCCACTACTTTTAGTCA 57.974 34.615 0.00 0.00 36.31 3.41
2068 2211 8.771766 CAAGTTTTAGTCCCACTACTTTTAGTC 58.228 37.037 0.00 0.00 36.31 2.59
2069 2212 7.228108 GCAAGTTTTAGTCCCACTACTTTTAGT 59.772 37.037 0.00 0.00 39.30 2.24
2070 2213 7.444487 AGCAAGTTTTAGTCCCACTACTTTTAG 59.556 37.037 0.00 0.00 28.93 1.85
2071 2214 7.284820 AGCAAGTTTTAGTCCCACTACTTTTA 58.715 34.615 0.00 0.00 28.93 1.52
2072 2215 6.127101 AGCAAGTTTTAGTCCCACTACTTTT 58.873 36.000 0.00 0.00 28.93 2.27
2073 2216 5.691896 AGCAAGTTTTAGTCCCACTACTTT 58.308 37.500 0.00 0.00 28.93 2.66
2074 2217 5.306114 AGCAAGTTTTAGTCCCACTACTT 57.694 39.130 0.00 0.00 28.93 2.24
2075 2218 4.976540 AGCAAGTTTTAGTCCCACTACT 57.023 40.909 0.00 0.00 28.93 2.57
2076 2219 5.791666 ACTAGCAAGTTTTAGTCCCACTAC 58.208 41.667 0.00 0.00 27.15 2.73
2077 2220 5.778750 AGACTAGCAAGTTTTAGTCCCACTA 59.221 40.000 15.72 0.00 44.32 2.74
2078 2221 4.593634 AGACTAGCAAGTTTTAGTCCCACT 59.406 41.667 15.72 1.62 44.32 4.00
2079 2222 4.895961 AGACTAGCAAGTTTTAGTCCCAC 58.104 43.478 15.72 0.00 44.32 4.61
2080 2223 4.591498 TGAGACTAGCAAGTTTTAGTCCCA 59.409 41.667 15.72 10.61 44.32 4.37
2081 2224 4.930405 GTGAGACTAGCAAGTTTTAGTCCC 59.070 45.833 15.72 8.76 44.32 4.46
2082 2225 4.930405 GGTGAGACTAGCAAGTTTTAGTCC 59.070 45.833 15.72 10.59 44.32 3.85
2083 2226 4.930405 GGGTGAGACTAGCAAGTTTTAGTC 59.070 45.833 13.08 13.08 43.83 2.59
2084 2227 4.347000 TGGGTGAGACTAGCAAGTTTTAGT 59.653 41.667 0.00 0.00 35.56 2.24
2085 2228 4.894784 TGGGTGAGACTAGCAAGTTTTAG 58.105 43.478 0.00 0.00 35.56 1.85
2086 2229 4.967084 TGGGTGAGACTAGCAAGTTTTA 57.033 40.909 0.00 0.00 35.56 1.52
2087 2230 3.857157 TGGGTGAGACTAGCAAGTTTT 57.143 42.857 0.00 0.00 35.56 2.43
2088 2231 3.679389 CATGGGTGAGACTAGCAAGTTT 58.321 45.455 0.00 0.00 35.56 2.66
2089 2232 2.616510 GCATGGGTGAGACTAGCAAGTT 60.617 50.000 0.00 0.00 35.56 2.66
2090 2233 1.065854 GCATGGGTGAGACTAGCAAGT 60.066 52.381 0.00 0.00 39.21 3.16
2091 2234 1.209019 AGCATGGGTGAGACTAGCAAG 59.791 52.381 0.00 0.00 0.00 4.01
2092 2235 1.279496 AGCATGGGTGAGACTAGCAA 58.721 50.000 0.00 0.00 0.00 3.91
2093 2236 1.065926 CAAGCATGGGTGAGACTAGCA 60.066 52.381 0.00 0.00 0.00 3.49
2094 2237 1.661341 CAAGCATGGGTGAGACTAGC 58.339 55.000 0.00 0.00 0.00 3.42
2095 2238 2.322355 CCAAGCATGGGTGAGACTAG 57.678 55.000 0.00 0.00 43.51 2.57
2106 2249 7.500227 TCTCTTTAGTATTTGGATCCAAGCATG 59.500 37.037 25.69 12.43 37.24 4.06
2107 2250 7.500559 GTCTCTTTAGTATTTGGATCCAAGCAT 59.499 37.037 25.69 19.69 37.24 3.79
2108 2251 6.823689 GTCTCTTTAGTATTTGGATCCAAGCA 59.176 38.462 25.69 14.00 37.24 3.91
2109 2252 7.051000 AGTCTCTTTAGTATTTGGATCCAAGC 58.949 38.462 25.69 19.18 37.24 4.01
2146 2289 8.704668 GGGTTTGGAGGATAATAAATGTTCAAT 58.295 33.333 0.00 0.00 0.00 2.57
2147 2290 7.898636 AGGGTTTGGAGGATAATAAATGTTCAA 59.101 33.333 0.00 0.00 0.00 2.69
2148 2291 7.418378 AGGGTTTGGAGGATAATAAATGTTCA 58.582 34.615 0.00 0.00 0.00 3.18
2149 2292 7.898014 AGGGTTTGGAGGATAATAAATGTTC 57.102 36.000 0.00 0.00 0.00 3.18
2150 2293 7.898636 TGAAGGGTTTGGAGGATAATAAATGTT 59.101 33.333 0.00 0.00 0.00 2.71
2151 2294 7.418378 TGAAGGGTTTGGAGGATAATAAATGT 58.582 34.615 0.00 0.00 0.00 2.71
2152 2295 7.896383 TGAAGGGTTTGGAGGATAATAAATG 57.104 36.000 0.00 0.00 0.00 2.32
2153 2296 9.147732 GATTGAAGGGTTTGGAGGATAATAAAT 57.852 33.333 0.00 0.00 0.00 1.40
2154 2297 7.563556 GGATTGAAGGGTTTGGAGGATAATAAA 59.436 37.037 0.00 0.00 0.00 1.40
2155 2298 7.066781 GGATTGAAGGGTTTGGAGGATAATAA 58.933 38.462 0.00 0.00 0.00 1.40
2156 2299 6.161348 TGGATTGAAGGGTTTGGAGGATAATA 59.839 38.462 0.00 0.00 0.00 0.98
2157 2300 5.043432 TGGATTGAAGGGTTTGGAGGATAAT 60.043 40.000 0.00 0.00 0.00 1.28
2158 2301 4.293634 TGGATTGAAGGGTTTGGAGGATAA 59.706 41.667 0.00 0.00 0.00 1.75
2159 2302 3.855599 TGGATTGAAGGGTTTGGAGGATA 59.144 43.478 0.00 0.00 0.00 2.59
2160 2303 2.654385 TGGATTGAAGGGTTTGGAGGAT 59.346 45.455 0.00 0.00 0.00 3.24
2161 2304 2.041620 CTGGATTGAAGGGTTTGGAGGA 59.958 50.000 0.00 0.00 0.00 3.71
2162 2305 2.041620 TCTGGATTGAAGGGTTTGGAGG 59.958 50.000 0.00 0.00 0.00 4.30
2163 2306 3.439857 TCTGGATTGAAGGGTTTGGAG 57.560 47.619 0.00 0.00 0.00 3.86
2164 2307 3.140144 AGTTCTGGATTGAAGGGTTTGGA 59.860 43.478 0.00 0.00 0.00 3.53
2165 2308 3.500343 AGTTCTGGATTGAAGGGTTTGG 58.500 45.455 0.00 0.00 0.00 3.28
2166 2309 5.183904 CCTTAGTTCTGGATTGAAGGGTTTG 59.816 44.000 0.00 0.00 31.64 2.93
2167 2310 5.074515 TCCTTAGTTCTGGATTGAAGGGTTT 59.925 40.000 0.00 0.00 35.25 3.27
2168 2311 4.601857 TCCTTAGTTCTGGATTGAAGGGTT 59.398 41.667 0.00 0.00 35.25 4.11
2169 2312 4.175962 TCCTTAGTTCTGGATTGAAGGGT 58.824 43.478 0.00 0.00 35.25 4.34
2170 2313 4.471386 TCTCCTTAGTTCTGGATTGAAGGG 59.529 45.833 0.00 0.00 35.25 3.95
2171 2314 5.396213 CCTCTCCTTAGTTCTGGATTGAAGG 60.396 48.000 0.00 0.00 35.74 3.46
2172 2315 5.423610 TCCTCTCCTTAGTTCTGGATTGAAG 59.576 44.000 0.00 0.00 0.00 3.02
2173 2316 5.342017 TCCTCTCCTTAGTTCTGGATTGAA 58.658 41.667 0.00 0.00 0.00 2.69
2174 2317 4.947883 TCCTCTCCTTAGTTCTGGATTGA 58.052 43.478 0.00 0.00 0.00 2.57
2175 2318 5.683876 TTCCTCTCCTTAGTTCTGGATTG 57.316 43.478 0.00 0.00 0.00 2.67
2176 2319 6.899892 AATTCCTCTCCTTAGTTCTGGATT 57.100 37.500 0.00 0.00 0.00 3.01
2177 2320 7.996758 TTAATTCCTCTCCTTAGTTCTGGAT 57.003 36.000 0.00 0.00 0.00 3.41
2178 2321 7.808279 TTTAATTCCTCTCCTTAGTTCTGGA 57.192 36.000 0.00 0.00 0.00 3.86
2179 2322 8.267894 TCATTTAATTCCTCTCCTTAGTTCTGG 58.732 37.037 0.00 0.00 0.00 3.86
2180 2323 9.323985 CTCATTTAATTCCTCTCCTTAGTTCTG 57.676 37.037 0.00 0.00 0.00 3.02
2181 2324 8.490311 CCTCATTTAATTCCTCTCCTTAGTTCT 58.510 37.037 0.00 0.00 0.00 3.01
2182 2325 8.487028 TCCTCATTTAATTCCTCTCCTTAGTTC 58.513 37.037 0.00 0.00 0.00 3.01
2183 2326 8.393959 TCCTCATTTAATTCCTCTCCTTAGTT 57.606 34.615 0.00 0.00 0.00 2.24
2184 2327 7.846823 TCTCCTCATTTAATTCCTCTCCTTAGT 59.153 37.037 0.00 0.00 0.00 2.24
2185 2328 8.256356 TCTCCTCATTTAATTCCTCTCCTTAG 57.744 38.462 0.00 0.00 0.00 2.18
2186 2329 8.068110 TCTCTCCTCATTTAATTCCTCTCCTTA 58.932 37.037 0.00 0.00 0.00 2.69
2187 2330 6.905776 TCTCTCCTCATTTAATTCCTCTCCTT 59.094 38.462 0.00 0.00 0.00 3.36
2188 2331 6.448202 TCTCTCCTCATTTAATTCCTCTCCT 58.552 40.000 0.00 0.00 0.00 3.69
2189 2332 6.553100 TCTCTCTCCTCATTTAATTCCTCTCC 59.447 42.308 0.00 0.00 0.00 3.71
2190 2333 7.505585 TCTCTCTCTCCTCATTTAATTCCTCTC 59.494 40.741 0.00 0.00 0.00 3.20
2191 2334 7.361438 TCTCTCTCTCCTCATTTAATTCCTCT 58.639 38.462 0.00 0.00 0.00 3.69
2192 2335 7.595819 TCTCTCTCTCCTCATTTAATTCCTC 57.404 40.000 0.00 0.00 0.00 3.71
2193 2336 6.041979 GCTCTCTCTCTCCTCATTTAATTCCT 59.958 42.308 0.00 0.00 0.00 3.36
2194 2337 6.041979 AGCTCTCTCTCTCCTCATTTAATTCC 59.958 42.308 0.00 0.00 0.00 3.01
2195 2338 7.054491 AGCTCTCTCTCTCCTCATTTAATTC 57.946 40.000 0.00 0.00 0.00 2.17
2196 2339 8.546083 TTAGCTCTCTCTCTCCTCATTTAATT 57.454 34.615 0.00 0.00 0.00 1.40
2197 2340 8.725606 ATTAGCTCTCTCTCTCCTCATTTAAT 57.274 34.615 0.00 0.00 0.00 1.40
2198 2341 9.073475 GTATTAGCTCTCTCTCTCCTCATTTAA 57.927 37.037 0.00 0.00 0.00 1.52
2199 2342 8.221251 TGTATTAGCTCTCTCTCTCCTCATTTA 58.779 37.037 0.00 0.00 0.00 1.40
2200 2343 7.066142 TGTATTAGCTCTCTCTCTCCTCATTT 58.934 38.462 0.00 0.00 0.00 2.32
2201 2344 6.609876 TGTATTAGCTCTCTCTCTCCTCATT 58.390 40.000 0.00 0.00 0.00 2.57
2202 2345 6.199557 TGTATTAGCTCTCTCTCTCCTCAT 57.800 41.667 0.00 0.00 0.00 2.90
2203 2346 5.638530 TGTATTAGCTCTCTCTCTCCTCA 57.361 43.478 0.00 0.00 0.00 3.86
2204 2347 8.807948 AATATGTATTAGCTCTCTCTCTCCTC 57.192 38.462 0.00 0.00 0.00 3.71
2205 2348 9.600432 AAAATATGTATTAGCTCTCTCTCTCCT 57.400 33.333 0.00 0.00 0.00 3.69
2235 2378 9.025041 CTAAAATCTTTTAGTCATGGGAAACCT 57.975 33.333 12.31 0.00 45.91 3.50
2249 2392 9.654663 GACTAGTCTTGAGGCTAAAATCTTTTA 57.345 33.333 15.91 0.00 0.00 1.52
2250 2393 7.608376 GGACTAGTCTTGAGGCTAAAATCTTTT 59.392 37.037 21.88 0.00 0.00 2.27
2251 2394 7.037945 AGGACTAGTCTTGAGGCTAAAATCTTT 60.038 37.037 21.88 0.00 0.00 2.52
2252 2395 6.442244 AGGACTAGTCTTGAGGCTAAAATCTT 59.558 38.462 21.88 0.00 0.00 2.40
2253 2396 5.961421 AGGACTAGTCTTGAGGCTAAAATCT 59.039 40.000 21.88 3.06 0.00 2.40
2254 2397 6.228616 AGGACTAGTCTTGAGGCTAAAATC 57.771 41.667 21.88 0.73 0.00 2.17
2255 2398 6.183360 GCTAGGACTAGTCTTGAGGCTAAAAT 60.183 42.308 21.88 0.00 35.65 1.82
2256 2399 5.127356 GCTAGGACTAGTCTTGAGGCTAAAA 59.873 44.000 21.88 0.00 35.65 1.52
2257 2400 4.645588 GCTAGGACTAGTCTTGAGGCTAAA 59.354 45.833 21.88 0.00 35.65 1.85
2258 2401 4.208746 GCTAGGACTAGTCTTGAGGCTAA 58.791 47.826 21.88 0.00 35.65 3.09
2259 2402 3.435313 GGCTAGGACTAGTCTTGAGGCTA 60.435 52.174 24.87 16.06 35.06 3.93
2260 2403 2.661718 GCTAGGACTAGTCTTGAGGCT 58.338 52.381 21.88 11.79 35.65 4.58
2261 2404 1.684450 GGCTAGGACTAGTCTTGAGGC 59.316 57.143 21.88 21.38 35.06 4.70
2262 2405 3.306472 AGGCTAGGACTAGTCTTGAGG 57.694 52.381 21.88 10.56 45.03 3.86
2268 2411 6.377712 TGACTAAAAAGAGGCTAGGACTAGTC 59.622 42.308 14.87 14.87 38.03 2.59
2269 2412 6.254522 TGACTAAAAAGAGGCTAGGACTAGT 58.745 40.000 0.00 0.00 35.65 2.57
2270 2413 6.183360 CCTGACTAAAAAGAGGCTAGGACTAG 60.183 46.154 1.98 1.98 36.29 2.57
2271 2414 5.657302 CCTGACTAAAAAGAGGCTAGGACTA 59.343 44.000 0.00 0.00 29.08 2.59
2272 2415 4.468153 CCTGACTAAAAAGAGGCTAGGACT 59.532 45.833 0.00 0.00 29.08 3.85
2273 2416 4.383226 CCCTGACTAAAAAGAGGCTAGGAC 60.383 50.000 0.00 0.00 29.08 3.85
2274 2417 3.775316 CCCTGACTAAAAAGAGGCTAGGA 59.225 47.826 0.00 0.00 29.08 2.94
2275 2418 3.118223 CCCCTGACTAAAAAGAGGCTAGG 60.118 52.174 0.00 0.00 0.00 3.02
2276 2419 3.519913 ACCCCTGACTAAAAAGAGGCTAG 59.480 47.826 0.00 0.00 0.00 3.42
2277 2420 3.263425 CACCCCTGACTAAAAAGAGGCTA 59.737 47.826 0.00 0.00 0.00 3.93
2278 2421 2.040412 CACCCCTGACTAAAAAGAGGCT 59.960 50.000 0.00 0.00 0.00 4.58
2279 2422 2.437413 CACCCCTGACTAAAAAGAGGC 58.563 52.381 0.00 0.00 0.00 4.70
2280 2423 2.040412 AGCACCCCTGACTAAAAAGAGG 59.960 50.000 0.00 0.00 0.00 3.69
2281 2424 3.425162 AGCACCCCTGACTAAAAAGAG 57.575 47.619 0.00 0.00 0.00 2.85
2282 2425 3.486383 CAAGCACCCCTGACTAAAAAGA 58.514 45.455 0.00 0.00 0.00 2.52
2283 2426 2.558359 CCAAGCACCCCTGACTAAAAAG 59.442 50.000 0.00 0.00 0.00 2.27
2284 2427 2.175931 TCCAAGCACCCCTGACTAAAAA 59.824 45.455 0.00 0.00 0.00 1.94
2285 2428 1.777878 TCCAAGCACCCCTGACTAAAA 59.222 47.619 0.00 0.00 0.00 1.52
2286 2429 1.440618 TCCAAGCACCCCTGACTAAA 58.559 50.000 0.00 0.00 0.00 1.85
2287 2430 1.073284 GTTCCAAGCACCCCTGACTAA 59.927 52.381 0.00 0.00 0.00 2.24
2288 2431 0.690762 GTTCCAAGCACCCCTGACTA 59.309 55.000 0.00 0.00 0.00 2.59
2289 2432 1.062488 AGTTCCAAGCACCCCTGACT 61.062 55.000 0.00 0.00 0.00 3.41
2290 2433 0.178990 AAGTTCCAAGCACCCCTGAC 60.179 55.000 0.00 0.00 0.00 3.51
2291 2434 0.555769 AAAGTTCCAAGCACCCCTGA 59.444 50.000 0.00 0.00 0.00 3.86
2292 2435 2.162681 CTAAAGTTCCAAGCACCCCTG 58.837 52.381 0.00 0.00 0.00 4.45
2293 2436 1.547901 GCTAAAGTTCCAAGCACCCCT 60.548 52.381 0.00 0.00 36.26 4.79
2294 2437 0.888619 GCTAAAGTTCCAAGCACCCC 59.111 55.000 0.00 0.00 36.26 4.95
2295 2438 0.888619 GGCTAAAGTTCCAAGCACCC 59.111 55.000 7.02 0.00 38.01 4.61
2296 2439 1.813178 GAGGCTAAAGTTCCAAGCACC 59.187 52.381 0.00 0.00 38.01 5.01
2297 2440 2.784347 AGAGGCTAAAGTTCCAAGCAC 58.216 47.619 0.00 2.09 38.01 4.40
2298 2441 4.634012 TTAGAGGCTAAAGTTCCAAGCA 57.366 40.909 0.00 0.00 38.01 3.91
2299 2442 5.705905 TCTTTTAGAGGCTAAAGTTCCAAGC 59.294 40.000 7.84 0.00 33.97 4.01
2300 2443 7.118535 GTCTCTTTTAGAGGCTAAAGTTCCAAG 59.881 40.741 7.84 0.00 43.38 3.61
2301 2444 6.935208 GTCTCTTTTAGAGGCTAAAGTTCCAA 59.065 38.462 7.84 0.00 43.38 3.53
2302 2445 6.465084 GTCTCTTTTAGAGGCTAAAGTTCCA 58.535 40.000 7.84 0.00 43.38 3.53
2303 2446 6.971527 GTCTCTTTTAGAGGCTAAAGTTCC 57.028 41.667 7.84 0.00 43.38 3.62
2312 2455 9.654663 TGACTAAAAATAGTCTCTTTTAGAGGC 57.345 33.333 22.30 14.20 46.94 4.70
2331 2474 9.720769 CAAGGGACTATTTTTAGTCTGACTAAA 57.279 33.333 29.65 29.65 42.90 1.85
2332 2475 8.877195 ACAAGGGACTATTTTTAGTCTGACTAA 58.123 33.333 22.80 22.80 44.35 2.24
2333 2476 8.431910 ACAAGGGACTATTTTTAGTCTGACTA 57.568 34.615 13.34 13.34 44.35 2.59
2334 2477 7.317722 ACAAGGGACTATTTTTAGTCTGACT 57.682 36.000 15.57 15.57 44.35 3.41
2335 2478 9.315525 GATACAAGGGACTATTTTTAGTCTGAC 57.684 37.037 11.69 0.00 44.35 3.51
2336 2479 8.483758 GGATACAAGGGACTATTTTTAGTCTGA 58.516 37.037 11.69 0.00 44.35 3.27
2337 2480 8.664211 GGATACAAGGGACTATTTTTAGTCTG 57.336 38.462 11.69 6.32 44.35 3.51
2357 2500 3.244596 GGGATAAGAGGGTGCTTGGATAC 60.245 52.174 0.00 0.00 0.00 2.24
2358 2501 2.979678 GGGATAAGAGGGTGCTTGGATA 59.020 50.000 0.00 0.00 0.00 2.59
2359 2502 1.777272 GGGATAAGAGGGTGCTTGGAT 59.223 52.381 0.00 0.00 0.00 3.41
2360 2503 1.213296 GGGATAAGAGGGTGCTTGGA 58.787 55.000 0.00 0.00 0.00 3.53
2361 2504 0.179045 CGGGATAAGAGGGTGCTTGG 60.179 60.000 0.00 0.00 0.00 3.61
2362 2505 0.815615 GCGGGATAAGAGGGTGCTTG 60.816 60.000 0.00 0.00 0.00 4.01
2363 2506 0.983378 AGCGGGATAAGAGGGTGCTT 60.983 55.000 0.00 0.00 0.00 3.91
2364 2507 1.383248 AGCGGGATAAGAGGGTGCT 60.383 57.895 0.00 0.00 0.00 4.40
2365 2508 1.227674 CAGCGGGATAAGAGGGTGC 60.228 63.158 0.00 0.00 0.00 5.01
2366 2509 0.105039 GTCAGCGGGATAAGAGGGTG 59.895 60.000 0.00 0.00 0.00 4.61
2367 2510 0.325296 TGTCAGCGGGATAAGAGGGT 60.325 55.000 0.00 0.00 0.00 4.34
2368 2511 0.830648 TTGTCAGCGGGATAAGAGGG 59.169 55.000 0.00 0.00 0.00 4.30
2369 2512 1.808133 GCTTGTCAGCGGGATAAGAGG 60.808 57.143 17.59 0.00 44.85 3.69
2370 2513 1.576356 GCTTGTCAGCGGGATAAGAG 58.424 55.000 17.59 0.00 44.85 2.85
2371 2514 3.760693 GCTTGTCAGCGGGATAAGA 57.239 52.632 17.59 0.00 44.85 2.10
2381 2524 1.081892 CGGTCTCCAATGCTTGTCAG 58.918 55.000 0.00 0.00 0.00 3.51
2401 2544 1.267121 TCCCTTGGAGAAAGAGGACG 58.733 55.000 0.00 0.00 38.24 4.79
2403 2546 2.639839 CACTTCCCTTGGAGAAAGAGGA 59.360 50.000 0.00 0.00 38.24 3.71
2452 2595 4.333649 ACAACAGTTTCAGACATGACAGTG 59.666 41.667 0.00 0.00 40.77 3.66
2488 2631 9.435688 TGGTATTGTGCATAATGATAGTACATC 57.564 33.333 17.97 0.00 0.00 3.06
2551 2694 2.866762 GTTAAAGCCATCTAGACCGCAG 59.133 50.000 13.76 0.00 0.00 5.18
2679 2822 6.114187 TGATCTAGGAACAACTGTGACAAT 57.886 37.500 0.00 0.00 0.00 2.71
2689 2832 7.441157 CCGCTAATTAACATGATCTAGGAACAA 59.559 37.037 0.00 0.00 0.00 2.83
2738 2881 6.539103 GGTCACAAGGAGAATGTATTAACTCC 59.461 42.308 0.00 0.00 46.28 3.85
2739 2882 6.539103 GGGTCACAAGGAGAATGTATTAACTC 59.461 42.308 0.00 0.00 0.00 3.01
2740 2883 6.215636 AGGGTCACAAGGAGAATGTATTAACT 59.784 38.462 0.00 0.00 0.00 2.24
2741 2884 6.415573 AGGGTCACAAGGAGAATGTATTAAC 58.584 40.000 0.00 0.00 0.00 2.01
2742 2885 6.636454 AGGGTCACAAGGAGAATGTATTAA 57.364 37.500 0.00 0.00 0.00 1.40
2743 2886 6.012858 ACAAGGGTCACAAGGAGAATGTATTA 60.013 38.462 0.00 0.00 0.00 0.98
2744 2887 5.222130 ACAAGGGTCACAAGGAGAATGTATT 60.222 40.000 0.00 0.00 0.00 1.89
2745 2888 4.289672 ACAAGGGTCACAAGGAGAATGTAT 59.710 41.667 0.00 0.00 0.00 2.29
2746 2889 3.650942 ACAAGGGTCACAAGGAGAATGTA 59.349 43.478 0.00 0.00 0.00 2.29
2747 2890 2.443255 ACAAGGGTCACAAGGAGAATGT 59.557 45.455 0.00 0.00 0.00 2.71
2748 2891 3.146104 ACAAGGGTCACAAGGAGAATG 57.854 47.619 0.00 0.00 0.00 2.67
2749 2892 3.264450 CCTACAAGGGTCACAAGGAGAAT 59.736 47.826 0.00 0.00 0.00 2.40
2750 2893 2.637872 CCTACAAGGGTCACAAGGAGAA 59.362 50.000 0.00 0.00 0.00 2.87
2751 2894 2.158219 TCCTACAAGGGTCACAAGGAGA 60.158 50.000 0.00 0.00 35.59 3.71
2752 2895 2.257207 TCCTACAAGGGTCACAAGGAG 58.743 52.381 0.00 0.00 35.59 3.69
2753 2896 2.370849 GTTCCTACAAGGGTCACAAGGA 59.629 50.000 0.00 0.00 35.59 3.36
3082 6562 8.209917 GGTACCACAAGAATACCTTATCAAAG 57.790 38.462 7.15 0.00 36.26 2.77
3176 6673 5.103301 TCCCCCTAATTATTTGGCTGATTGA 60.103 40.000 0.00 0.00 0.00 2.57
3340 6852 6.482973 AGGTGTGCCAAAAATAAGACAAAATG 59.517 34.615 0.00 0.00 37.19 2.32
3374 6886 3.264947 CACAAATCCTGAGAGCATTCGA 58.735 45.455 0.00 0.00 0.00 3.71
3486 7001 6.864360 CCAAAACATGGTCAATCAAAACAT 57.136 33.333 0.00 0.00 44.85 2.71
3530 7045 1.903404 CCCACCAACCAACTCCAGC 60.903 63.158 0.00 0.00 0.00 4.85
3541 7056 0.323633 CATGTCCATGCTCCCACCAA 60.324 55.000 0.00 0.00 31.39 3.67
3593 7108 9.694137 CAATTTTTGTTCATGGCCAATTATTTT 57.306 25.926 10.96 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.