Multiple sequence alignment - TraesCS3A01G137000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G137000 chr3A 100.000 5249 0 0 1 5249 114421943 114427191 0.000000e+00 9694.0
1 TraesCS3A01G137000 chr3A 100.000 36 0 0 441 476 114422298 114422333 3.390000e-07 67.6
2 TraesCS3A01G137000 chr3A 100.000 36 0 0 356 391 114422383 114422418 3.390000e-07 67.6
3 TraesCS3A01G137000 chr3B 93.263 3785 237 6 488 4270 147543247 147547015 0.000000e+00 5561.0
4 TraesCS3A01G137000 chr3B 84.294 885 97 27 4390 5249 147547410 147548277 0.000000e+00 826.0
5 TraesCS3A01G137000 chr3B 89.632 299 29 2 1 298 147542700 147542997 3.840000e-101 379.0
6 TraesCS3A01G137000 chr3D 93.570 3577 212 5 699 4270 96391435 96394998 0.000000e+00 5315.0
7 TraesCS3A01G137000 chr3D 84.817 876 93 31 4390 5249 96395404 96396255 0.000000e+00 845.0
8 TraesCS3A01G137000 chr3D 90.333 300 27 2 1 299 96390664 96390962 4.930000e-105 392.0
9 TraesCS3A01G137000 chr3D 87.625 299 28 4 1 298 96365446 96365736 6.510000e-89 339.0
10 TraesCS3A01G137000 chr3D 91.716 169 14 0 488 656 96391266 96391434 8.790000e-58 235.0
11 TraesCS3A01G137000 chr3D 94.286 70 4 0 551 620 96366057 96366126 2.000000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G137000 chr3A 114421943 114427191 5248 False 9694.000000 9694 100.0000 1 5249 1 chr3A.!!$F1 5248
1 TraesCS3A01G137000 chr3B 147542700 147548277 5577 False 2255.333333 5561 89.0630 1 5249 3 chr3B.!!$F1 5248
2 TraesCS3A01G137000 chr3D 96390664 96396255 5591 False 1696.750000 5315 90.1090 1 5249 4 chr3D.!!$F2 5248
3 TraesCS3A01G137000 chr3D 96365446 96366126 680 False 223.500000 339 90.9555 1 620 2 chr3D.!!$F1 619

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
725 885 0.029300 TGCGCTCTTGTTCTGTTTGC 59.971 50.0 9.73 0.0 0.00 3.68 F
1372 1536 0.178967 TGCATCTGGCCTTGGAACAA 60.179 50.0 3.32 0.0 44.02 2.83 F
1650 1814 0.597637 GTATCGCGGATGGTGAGGTG 60.598 60.0 6.13 0.0 38.83 4.00 F
3148 3312 0.107993 CGTGACCATGACCTGCATCT 60.108 55.0 0.00 0.0 34.15 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1581 1745 0.178068 AGGAAATGGCGTATGCGTCT 59.822 50.0 9.69 0.0 44.07 4.18 R
2265 2429 0.471617 CTAGGCCATCCCTTCCACTG 59.528 60.0 5.01 0.0 43.06 3.66 R
3495 3659 0.043822 GACGCATCGCATCGAAGAAC 60.044 55.0 0.00 0.0 43.58 3.01 R
4758 5257 0.107643 TGGAGAAATGTGCGGTGTCA 59.892 50.0 0.00 0.0 0.00 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.419828 CGTGTGGTTGCAGCTTCA 58.580 55.556 0.00 0.00 0.00 3.02
30 31 2.768492 GCTTCATGCCGGCCTCTTG 61.768 63.158 26.77 16.24 35.15 3.02
110 111 2.203337 TAATGGCGGCCTGGATGC 60.203 61.111 21.46 0.00 0.00 3.91
168 169 1.470098 CTTGACCGCCATTCTTGAAGG 59.530 52.381 0.00 0.00 0.00 3.46
169 170 0.960364 TGACCGCCATTCTTGAAGGC 60.960 55.000 11.26 11.26 44.89 4.35
172 173 4.319133 GCCATTCTTGAAGGCGGA 57.681 55.556 0.00 0.00 38.86 5.54
173 174 2.799176 GCCATTCTTGAAGGCGGAT 58.201 52.632 0.00 0.00 38.86 4.18
187 188 4.120085 GGATACCCGTTGGCTTCG 57.880 61.111 0.00 0.00 33.59 3.79
214 215 0.179089 CCGTCAGGGAAGATGAGCAG 60.179 60.000 0.00 0.00 38.47 4.24
252 253 1.811266 GAGCGCGATGGAGAGCAAA 60.811 57.895 12.10 0.00 39.42 3.68
269 270 0.813184 AAAATCTGCAGATGCCACCG 59.187 50.000 29.34 0.00 41.18 4.94
277 278 1.019673 CAGATGCCACCGAATTCAGG 58.980 55.000 6.22 10.15 0.00 3.86
281 282 1.678970 GCCACCGAATTCAGGGCTT 60.679 57.895 19.37 0.25 41.39 4.35
290 291 2.393271 ATTCAGGGCTTCAGACTTCG 57.607 50.000 0.00 0.00 0.00 3.79
294 295 1.078143 GGGCTTCAGACTTCGCCAT 60.078 57.895 8.27 0.00 44.23 4.40
299 300 3.462021 GCTTCAGACTTCGCCATAAGAT 58.538 45.455 0.00 0.00 0.00 2.40
300 301 3.873952 GCTTCAGACTTCGCCATAAGATT 59.126 43.478 0.00 0.00 0.00 2.40
301 302 4.333926 GCTTCAGACTTCGCCATAAGATTT 59.666 41.667 0.00 0.00 0.00 2.17
302 303 5.163713 GCTTCAGACTTCGCCATAAGATTTT 60.164 40.000 0.00 0.00 0.00 1.82
303 304 6.623767 GCTTCAGACTTCGCCATAAGATTTTT 60.624 38.462 0.00 0.00 0.00 1.94
321 431 1.975660 TTTTCGGTCAGGTTGGAAGG 58.024 50.000 0.00 0.00 0.00 3.46
324 434 1.192146 TCGGTCAGGTTGGAAGGGAG 61.192 60.000 0.00 0.00 0.00 4.30
333 443 2.106684 GGTTGGAAGGGAGACTGAAACT 59.893 50.000 0.00 0.00 0.00 2.66
342 452 3.449377 GGGAGACTGAAACTAAGAGAGGG 59.551 52.174 0.00 0.00 0.00 4.30
346 456 2.835156 ACTGAAACTAAGAGAGGGAGCC 59.165 50.000 0.00 0.00 0.00 4.70
347 457 2.834549 CTGAAACTAAGAGAGGGAGCCA 59.165 50.000 0.00 0.00 0.00 4.75
349 459 3.198635 TGAAACTAAGAGAGGGAGCCATG 59.801 47.826 0.00 0.00 0.00 3.66
359 472 1.153208 GGAGCCATGGCAGAGACTG 60.153 63.158 37.18 0.00 44.88 3.51
376 489 4.994744 GCAATGGTGCCTGTTTCC 57.005 55.556 0.00 0.00 45.68 3.13
379 492 2.102578 GCAATGGTGCCTGTTTCCTAT 58.897 47.619 0.00 0.00 45.68 2.57
380 493 3.287222 GCAATGGTGCCTGTTTCCTATA 58.713 45.455 0.00 0.00 45.68 1.31
381 494 3.891366 GCAATGGTGCCTGTTTCCTATAT 59.109 43.478 0.00 0.00 45.68 0.86
382 495 5.070001 GCAATGGTGCCTGTTTCCTATATA 58.930 41.667 0.00 0.00 45.68 0.86
384 497 6.127897 GCAATGGTGCCTGTTTCCTATATATC 60.128 42.308 0.00 0.00 45.68 1.63
385 498 6.702449 ATGGTGCCTGTTTCCTATATATCA 57.298 37.500 0.00 0.00 0.00 2.15
386 499 6.702449 TGGTGCCTGTTTCCTATATATCAT 57.298 37.500 0.00 0.00 0.00 2.45
387 500 7.090319 TGGTGCCTGTTTCCTATATATCATT 57.910 36.000 0.00 0.00 0.00 2.57
389 502 8.664992 TGGTGCCTGTTTCCTATATATCATTAA 58.335 33.333 0.00 0.00 0.00 1.40
390 503 9.515226 GGTGCCTGTTTCCTATATATCATTAAA 57.485 33.333 0.00 0.00 0.00 1.52
419 579 9.999660 TGTACTAGTACAAAATGTATTCACCAA 57.000 29.630 29.20 3.79 42.49 3.67
422 582 9.515226 ACTAGTACAAAATGTATTCACCAATGT 57.485 29.630 0.00 0.00 35.05 2.71
430 590 2.389962 ATTCACCAATGTGGCAATGC 57.610 45.000 0.00 0.00 42.67 3.56
432 592 0.604073 TCACCAATGTGGCAATGCAG 59.396 50.000 7.79 0.00 42.67 4.41
433 593 0.390603 CACCAATGTGGCAATGCAGG 60.391 55.000 7.79 1.17 42.67 4.85
439 599 3.794481 TGGCAATGCAGGCACAAT 58.206 50.000 7.79 0.00 39.34 2.71
441 601 1.186267 TGGCAATGCAGGCACAATGA 61.186 50.000 7.79 0.00 39.34 2.57
442 602 0.738412 GGCAATGCAGGCACAATGAC 60.738 55.000 7.79 0.00 0.00 3.06
450 610 0.892755 AGGCACAATGACTGCAATGG 59.107 50.000 0.00 0.00 31.94 3.16
451 611 0.604578 GGCACAATGACTGCAATGGT 59.395 50.000 0.00 0.00 36.27 3.55
452 612 1.670674 GGCACAATGACTGCAATGGTG 60.671 52.381 0.66 0.66 36.27 4.17
461 621 4.994744 GCAATGGTGCCTGTTTCC 57.005 55.556 0.00 0.00 45.68 3.13
462 622 2.354902 GCAATGGTGCCTGTTTCCT 58.645 52.632 0.00 0.00 45.68 3.36
463 623 1.544724 GCAATGGTGCCTGTTTCCTA 58.455 50.000 0.00 0.00 45.68 2.94
464 624 2.102578 GCAATGGTGCCTGTTTCCTAT 58.897 47.619 0.00 0.00 45.68 2.57
465 625 3.287222 GCAATGGTGCCTGTTTCCTATA 58.713 45.455 0.00 0.00 45.68 1.31
466 626 3.891366 GCAATGGTGCCTGTTTCCTATAT 59.109 43.478 0.00 0.00 45.68 0.86
467 627 5.070001 GCAATGGTGCCTGTTTCCTATATA 58.930 41.667 0.00 0.00 45.68 0.86
468 628 5.711976 GCAATGGTGCCTGTTTCCTATATAT 59.288 40.000 0.00 0.00 45.68 0.86
469 629 6.127897 GCAATGGTGCCTGTTTCCTATATATC 60.128 42.308 0.00 0.00 45.68 1.63
470 630 6.702449 ATGGTGCCTGTTTCCTATATATCA 57.298 37.500 0.00 0.00 0.00 2.15
471 631 6.702449 TGGTGCCTGTTTCCTATATATCAT 57.298 37.500 0.00 0.00 0.00 2.45
472 632 7.090319 TGGTGCCTGTTTCCTATATATCATT 57.910 36.000 0.00 0.00 0.00 2.57
473 633 8.213489 TGGTGCCTGTTTCCTATATATCATTA 57.787 34.615 0.00 0.00 0.00 1.90
474 634 8.664992 TGGTGCCTGTTTCCTATATATCATTAA 58.335 33.333 0.00 0.00 0.00 1.40
475 635 9.515226 GGTGCCTGTTTCCTATATATCATTAAA 57.485 33.333 0.00 0.00 0.00 1.52
477 637 9.214957 TGCCTGTTTCCTATATATCATTAAACG 57.785 33.333 0.00 0.00 0.00 3.60
478 638 8.175716 GCCTGTTTCCTATATATCATTAAACGC 58.824 37.037 0.00 0.00 0.00 4.84
479 639 9.214957 CCTGTTTCCTATATATCATTAAACGCA 57.785 33.333 0.00 0.00 0.00 5.24
481 641 9.772973 TGTTTCCTATATATCATTAAACGCACT 57.227 29.630 0.00 0.00 0.00 4.40
502 662 7.201444 CGCACTAACTAACTAACCTTGATGAAG 60.201 40.741 0.00 0.00 0.00 3.02
508 668 8.779354 ACTAACTAACCTTGATGAAGATGTTC 57.221 34.615 0.00 0.00 0.00 3.18
541 701 9.827411 GAAAAGGAGATAACTACAATGTTTCAC 57.173 33.333 0.00 0.00 0.00 3.18
553 713 5.835257 ACAATGTTTCACAATCACCTCTTG 58.165 37.500 0.00 0.00 0.00 3.02
598 758 1.301677 GGCTTTTCGCAGAGGACTGG 61.302 60.000 0.00 0.00 43.62 4.00
624 784 1.179152 TTTGGTGATGCTGCATGAGG 58.821 50.000 21.53 0.00 0.00 3.86
647 807 5.454613 GGATTCCTCCCATTTCTTCTCTCTC 60.455 48.000 0.00 0.00 35.28 3.20
656 816 5.896678 CCATTTCTTCTCTCTCCTTCCTCTA 59.103 44.000 0.00 0.00 0.00 2.43
661 821 4.890499 TCTCTCTCCTTCCTCTACCAAT 57.110 45.455 0.00 0.00 0.00 3.16
674 834 2.009774 CTACCAATGAACCGAAGCTGG 58.990 52.381 0.00 0.00 0.00 4.85
686 846 2.761304 GAAGCTGGCCTCCTTGCTGT 62.761 60.000 12.30 2.79 35.24 4.40
687 847 2.282745 GCTGGCCTCCTTGCTGTT 60.283 61.111 3.32 0.00 0.00 3.16
691 851 1.377856 GGCCTCCTTGCTGTTCTCC 60.378 63.158 0.00 0.00 0.00 3.71
708 868 1.808945 CTCCAATGGAGTGACAGTTGC 59.191 52.381 20.76 0.00 44.25 4.17
715 875 0.510359 GAGTGACAGTTGCGCTCTTG 59.490 55.000 9.73 6.50 39.24 3.02
716 876 0.179073 AGTGACAGTTGCGCTCTTGT 60.179 50.000 9.73 10.04 0.00 3.16
722 882 1.331756 CAGTTGCGCTCTTGTTCTGTT 59.668 47.619 9.73 0.00 0.00 3.16
723 883 2.017049 AGTTGCGCTCTTGTTCTGTTT 58.983 42.857 9.73 0.00 0.00 2.83
725 885 0.029300 TGCGCTCTTGTTCTGTTTGC 59.971 50.000 9.73 0.00 0.00 3.68
739 899 2.863137 CTGTTTGCGCTCTATCCTCTTC 59.137 50.000 9.73 0.00 0.00 2.87
804 968 7.601508 AGTTTTACATAAACACCCTCGTTAGAG 59.398 37.037 0.00 0.00 37.14 2.43
847 1011 3.379372 CGATGGAGTAGAAAGGACCGTAA 59.621 47.826 0.00 0.00 0.00 3.18
853 1017 5.417266 GGAGTAGAAAGGACCGTAACTAACT 59.583 44.000 0.00 0.00 0.00 2.24
865 1029 7.171337 GGACCGTAACTAACTTGTGTCATTTTA 59.829 37.037 0.00 0.00 0.00 1.52
867 1031 8.500773 ACCGTAACTAACTTGTGTCATTTTATG 58.499 33.333 0.00 0.00 0.00 1.90
888 1052 0.254747 ATTTTCCGGAATGCGAGGGA 59.745 50.000 19.62 0.00 0.00 4.20
905 1069 1.556451 GGGAGCAAATGGCCAAAGAAT 59.444 47.619 10.96 0.00 46.50 2.40
908 1072 3.306919 GGAGCAAATGGCCAAAGAATCAA 60.307 43.478 10.96 0.00 46.50 2.57
934 1098 2.564771 TCCAGAAAGCTATCCATTGCG 58.435 47.619 0.00 0.00 33.76 4.85
986 1150 2.029918 GCGGCAAAATTTGAACTCCTCT 60.030 45.455 10.26 0.00 0.00 3.69
987 1151 3.568538 CGGCAAAATTTGAACTCCTCTG 58.431 45.455 10.26 0.00 0.00 3.35
988 1152 3.320626 GGCAAAATTTGAACTCCTCTGC 58.679 45.455 10.26 0.00 0.00 4.26
989 1153 3.320626 GCAAAATTTGAACTCCTCTGCC 58.679 45.455 10.26 0.00 0.00 4.85
990 1154 3.006217 GCAAAATTTGAACTCCTCTGCCT 59.994 43.478 10.26 0.00 0.00 4.75
991 1155 4.802999 CAAAATTTGAACTCCTCTGCCTC 58.197 43.478 0.00 0.00 0.00 4.70
992 1156 2.797177 ATTTGAACTCCTCTGCCTCC 57.203 50.000 0.00 0.00 0.00 4.30
993 1157 1.434188 TTTGAACTCCTCTGCCTCCA 58.566 50.000 0.00 0.00 0.00 3.86
994 1158 0.979665 TTGAACTCCTCTGCCTCCAG 59.020 55.000 0.00 0.00 40.54 3.86
995 1159 1.220477 GAACTCCTCTGCCTCCAGC 59.780 63.158 0.00 0.00 39.00 4.85
996 1160 1.229464 AACTCCTCTGCCTCCAGCT 60.229 57.895 0.00 0.00 44.23 4.24
1037 1201 1.380380 CCTCCATTTCCAGCCACCC 60.380 63.158 0.00 0.00 0.00 4.61
1092 1256 2.757917 AGCCAGAGAGCGAGGGTC 60.758 66.667 0.00 0.00 38.01 4.46
1099 1263 2.753043 GAGCGAGGGTCCGGTGTA 60.753 66.667 0.00 0.00 40.59 2.90
1141 1305 3.640407 TCTTGGAGGCAGCCGCTT 61.640 61.111 15.60 0.00 38.60 4.68
1227 1391 2.258591 CTGTGTCGGTCGGGTGAG 59.741 66.667 0.00 0.00 0.00 3.51
1306 1470 3.456365 TCCTCCAGCTCTGCTCGC 61.456 66.667 0.00 0.00 36.40 5.03
1323 1487 0.389817 CGCAGATGAGGTCGTTGGAA 60.390 55.000 0.00 0.00 0.00 3.53
1337 1501 1.700186 GTTGGAAGGTGGGAAGAGAGT 59.300 52.381 0.00 0.00 0.00 3.24
1338 1502 2.106684 GTTGGAAGGTGGGAAGAGAGTT 59.893 50.000 0.00 0.00 0.00 3.01
1353 1517 3.325135 AGAGAGTTCATTTCCTGGTTCGT 59.675 43.478 0.00 0.00 0.00 3.85
1370 1534 1.885871 GTGCATCTGGCCTTGGAAC 59.114 57.895 3.32 0.00 43.89 3.62
1372 1536 0.178967 TGCATCTGGCCTTGGAACAA 60.179 50.000 3.32 0.00 44.02 2.83
1473 1637 3.243035 TGTTTGACGAAATGCCTCAAGTG 60.243 43.478 0.00 0.00 0.00 3.16
1544 1708 3.678548 GGTGATTTACGAGAAGGTGTGTC 59.321 47.826 0.00 0.00 0.00 3.67
1545 1709 4.557205 GTGATTTACGAGAAGGTGTGTCT 58.443 43.478 0.00 0.00 0.00 3.41
1554 1718 4.261656 CGAGAAGGTGTGTCTCTGTTTAGT 60.262 45.833 0.00 0.00 39.56 2.24
1556 1720 6.334102 AGAAGGTGTGTCTCTGTTTAGTAG 57.666 41.667 0.00 0.00 0.00 2.57
1573 1737 0.909133 TAGGATGCACTGCTGTGGGA 60.909 55.000 23.15 7.67 43.97 4.37
1581 1745 1.296392 CTGCTGTGGGATTCGACCA 59.704 57.895 0.00 0.00 35.14 4.02
1650 1814 0.597637 GTATCGCGGATGGTGAGGTG 60.598 60.000 6.13 0.00 38.83 4.00
1678 1842 3.055209 GGTACCTTGAGAAGTTGGGTC 57.945 52.381 4.06 0.00 0.00 4.46
1758 1922 2.753966 CGAGGATGCTTTGCGGGTG 61.754 63.158 0.00 0.00 0.00 4.61
1803 1967 6.238869 GGGATGCTATTTCTTGGAATTCTGTC 60.239 42.308 5.23 0.00 0.00 3.51
1835 1999 4.087907 TGTTTCTCAAATGGATGGCATGA 58.912 39.130 3.81 0.00 0.00 3.07
1860 2024 2.778659 GCTGTTGAGCATTTTAGCGAG 58.221 47.619 0.00 0.00 45.46 5.03
1890 2054 1.414181 GAAGGCCTGGAGATCGATTCA 59.586 52.381 5.69 0.00 0.00 2.57
1917 2081 0.752743 TGCTCAGTGTTTTGCCTGCT 60.753 50.000 0.00 0.00 0.00 4.24
1935 2099 4.641989 CCTGCTTGTGCTGAATTAGGTTAT 59.358 41.667 0.00 0.00 40.01 1.89
1962 2126 4.639078 TGTTGGAAGAGTGATTCATGGA 57.361 40.909 0.00 0.00 0.00 3.41
1986 2150 7.492994 GGATACTCTGTGAAAACTGGATTACTC 59.507 40.741 0.00 0.00 0.00 2.59
2002 2166 1.555967 ACTCTGGGAGCTTGAGTCTC 58.444 55.000 6.75 0.00 36.45 3.36
2070 2234 8.572855 TCATGTATGTGAAATGTGGTGAATTA 57.427 30.769 0.00 0.00 0.00 1.40
2082 2246 1.264288 GGTGAATTAGGCTATGCACGC 59.736 52.381 12.64 0.00 35.28 5.34
2113 2277 2.245795 TGCAATGTCATCGAAAAGCG 57.754 45.000 0.00 0.00 42.69 4.68
2136 2300 6.734871 GCGACATACATGTGTGGAATCTACTA 60.735 42.308 24.23 0.00 41.95 1.82
2265 2429 4.046462 TGAAGTGCGTCACTAGTTTGTAC 58.954 43.478 11.92 0.00 44.62 2.90
2270 2434 2.729882 GCGTCACTAGTTTGTACAGTGG 59.270 50.000 11.09 0.00 40.08 4.00
2271 2435 3.551454 GCGTCACTAGTTTGTACAGTGGA 60.551 47.826 11.09 0.00 40.08 4.02
2310 2474 7.175990 GTGGTTCATGGGTATCTTTTGAAGTTA 59.824 37.037 0.00 0.00 0.00 2.24
2370 2534 8.032952 TGATATCATTCTATGCGAAATCCAAC 57.967 34.615 0.00 0.00 34.79 3.77
2386 2550 3.753815 TCCAACATGACTGAAGATGCAA 58.246 40.909 0.00 0.00 0.00 4.08
2424 2588 4.322273 GGAATGCCTCATCGAGATGTCATA 60.322 45.833 12.22 0.58 39.72 2.15
2427 2591 3.194329 TGCCTCATCGAGATGTCATATCC 59.806 47.826 12.22 0.00 39.72 2.59
2484 2648 5.709631 TGGATTACACAGCAAAGCTATTGAA 59.290 36.000 11.34 0.00 36.40 2.69
2577 2741 2.138596 CACAGTTGCACCATTGGTTC 57.861 50.000 5.34 1.27 31.02 3.62
2589 2753 2.171448 CCATTGGTTCCTAGGGAGAGTG 59.829 54.545 9.46 1.75 31.21 3.51
2595 2759 2.233305 TCCTAGGGAGAGTGGTTCAC 57.767 55.000 9.46 0.00 34.10 3.18
2601 2765 0.245813 GGAGAGTGGTTCACGGGTAC 59.754 60.000 0.00 0.00 39.64 3.34
2616 2780 2.779506 GGGTACTCTGTGAAAACTGGG 58.220 52.381 0.00 0.00 0.00 4.45
2620 2784 2.654863 ACTCTGTGAAAACTGGGTTGG 58.345 47.619 0.00 0.00 0.00 3.77
2622 2786 3.201266 ACTCTGTGAAAACTGGGTTGGTA 59.799 43.478 0.00 0.00 0.00 3.25
2623 2787 4.204012 CTCTGTGAAAACTGGGTTGGTAA 58.796 43.478 0.00 0.00 0.00 2.85
2625 2789 3.951680 CTGTGAAAACTGGGTTGGTAAGT 59.048 43.478 0.00 0.00 0.00 2.24
2637 2801 4.020128 GGGTTGGTAAGTGAGACATCTCTT 60.020 45.833 10.18 0.30 43.25 2.85
2652 2816 7.041107 AGACATCTCTTGCTAATGTTCTTCTC 58.959 38.462 0.00 0.00 33.91 2.87
2703 2867 6.712241 CGTAGCACCAATAAGATATTCAGG 57.288 41.667 0.00 0.00 0.00 3.86
2706 2870 7.095607 CGTAGCACCAATAAGATATTCAGGAAC 60.096 40.741 0.00 0.00 0.00 3.62
2713 2877 8.737175 CCAATAAGATATTCAGGAACATGGATG 58.263 37.037 0.00 0.00 0.00 3.51
2721 2885 5.964958 TCAGGAACATGGATGAGAAAAAC 57.035 39.130 0.00 0.00 0.00 2.43
2748 2912 6.925610 GTCTCATGGACAGCAATAATTACA 57.074 37.500 8.84 0.00 43.94 2.41
2791 2955 2.969821 TGACAAAGTGGCTGGGTTAT 57.030 45.000 0.00 0.00 0.00 1.89
2793 2957 2.890311 TGACAAAGTGGCTGGGTTATTG 59.110 45.455 0.00 0.00 0.00 1.90
2806 2970 3.261580 GGGTTATTGCAAGAAATGGCAC 58.738 45.455 8.30 0.00 40.23 5.01
2811 2975 6.183360 GGTTATTGCAAGAAATGGCACTAGAT 60.183 38.462 8.30 0.00 40.23 1.98
2895 3059 3.730061 CGCTGAAAGATGGCAAATCTGTC 60.730 47.826 10.52 10.52 34.07 3.51
2900 3064 2.662866 AGATGGCAAATCTGTCCATGG 58.337 47.619 4.97 4.97 38.67 3.66
2928 3092 4.403432 GCCATCAGAAATGGAATGGAGAAA 59.597 41.667 8.23 0.00 41.64 2.52
2932 3096 7.340232 CCATCAGAAATGGAATGGAGAAAGTTA 59.660 37.037 0.00 0.00 41.64 2.24
2952 3116 1.164411 TTCCTGTTACCAATGCGCTG 58.836 50.000 9.73 0.00 0.00 5.18
2973 3137 4.609947 TGATGGAAATGTATGCGAAATGC 58.390 39.130 0.00 0.00 46.70 3.56
3081 3245 6.119240 TCCAGGAATAATCTAGCCAATGAG 57.881 41.667 0.00 0.00 0.00 2.90
3110 3274 2.796593 GTTTGTTCACTGAAATGCTGCC 59.203 45.455 0.00 0.00 0.00 4.85
3114 3278 0.609957 TCACTGAAATGCTGCCCCAG 60.610 55.000 0.00 1.86 34.12 4.45
3148 3312 0.107993 CGTGACCATGACCTGCATCT 60.108 55.000 0.00 0.00 34.15 2.90
3183 3347 1.153086 CCTTTCATCCCTGGAGCGG 60.153 63.158 0.00 0.00 0.00 5.52
3204 3368 1.933247 GCAGAGAGATGCACACCTAC 58.067 55.000 0.00 0.00 45.77 3.18
3234 3398 2.885616 AGAGGGTACTTGGAAGACGAA 58.114 47.619 0.00 0.00 0.00 3.85
3237 3401 4.081586 AGAGGGTACTTGGAAGACGAATTC 60.082 45.833 0.00 0.00 0.00 2.17
3317 3481 1.405105 GCTGTTTGACAGGTTGAGCAA 59.595 47.619 9.85 0.00 46.01 3.91
3411 3575 0.986527 TCTTTGAGCAGATGAGGGCA 59.013 50.000 0.00 0.00 0.00 5.36
3438 3602 3.859414 GAGCCGGATGCAGCCTCT 61.859 66.667 20.58 15.66 44.83 3.69
3441 3605 1.153168 GCCGGATGCAGCCTCTTTA 60.153 57.895 20.58 0.00 40.77 1.85
3459 3623 5.123227 TCTTTAAGTGCCATACTGTATGCC 58.877 41.667 19.90 11.51 40.26 4.40
3495 3659 0.106469 TGAGAGACGAGGGATGGAGG 60.106 60.000 0.00 0.00 0.00 4.30
3524 3688 1.849973 CGATGCGTCGTGAACACAA 59.150 52.632 20.17 0.00 42.78 3.33
3582 3746 1.895131 GACCTACTAACCAACACCGGA 59.105 52.381 9.46 0.00 0.00 5.14
3639 3803 1.202463 CCGATCGAGCCAGATTCAAGT 60.202 52.381 18.66 0.00 0.00 3.16
3686 3850 4.711399 TGCAGAATTCACAGGGATATCAG 58.289 43.478 8.44 0.00 0.00 2.90
3774 3938 5.761726 TCTTCTTGCCAACATATATGCTGAG 59.238 40.000 16.11 7.18 0.00 3.35
3788 3952 2.042404 GCTGAGGCTGAGAGATGGGG 62.042 65.000 4.75 0.00 35.22 4.96
3804 3968 1.077429 GGGGGCTGTAAGGAAGCTG 60.077 63.158 0.00 0.00 40.64 4.24
3823 3987 3.564027 GGAACAAGATCGGCGGCG 61.564 66.667 27.15 27.15 0.00 6.46
3886 4050 1.376037 GGCAGGGTTCAGGTCTTCG 60.376 63.158 0.00 0.00 0.00 3.79
3891 4055 1.006571 GGTTCAGGTCTTCGTCGCA 60.007 57.895 0.00 0.00 0.00 5.10
3924 4088 3.197106 TCCACAGGGGACAAGGATT 57.803 52.632 0.00 0.00 42.15 3.01
3975 4139 0.627451 TGCAGGAAGAAGGCCATGAT 59.373 50.000 5.01 0.00 0.00 2.45
4005 4169 1.002868 ATATGCTCTGATGGGCGCC 60.003 57.895 21.18 21.18 0.00 6.53
4092 4256 1.218316 GAATCTGTCGGAAGGGCGT 59.782 57.895 0.00 0.00 0.00 5.68
4128 4292 0.759346 AGAACTCGAGGGTTTGCACT 59.241 50.000 18.41 1.25 0.00 4.40
4176 4340 1.085091 CCAAGATGTGCAGCAGAGAC 58.915 55.000 0.00 0.00 0.00 3.36
4194 4358 5.868258 CAGAGACATCATATTGAGGGATTCG 59.132 44.000 0.00 0.00 31.56 3.34
4218 4382 5.458041 ACAGGTTCCATCATTTTGAACAG 57.542 39.130 0.00 0.00 40.04 3.16
4248 4412 3.677424 GCTCTTGCAGAGGTTACTGGTAG 60.677 52.174 12.98 0.00 42.54 3.18
4252 4416 2.370519 TGCAGAGGTTACTGGTAGCAAA 59.629 45.455 0.00 0.00 38.22 3.68
4255 4419 4.385825 CAGAGGTTACTGGTAGCAAAACA 58.614 43.478 16.98 0.00 34.64 2.83
4288 4452 8.291888 TGTAACATGTGTTGCATTTCATTTAC 57.708 30.769 11.75 5.74 43.77 2.01
4289 4453 7.922811 TGTAACATGTGTTGCATTTCATTTACA 59.077 29.630 11.75 16.71 43.77 2.41
4290 4454 7.410800 AACATGTGTTGCATTTCATTTACAG 57.589 32.000 0.00 0.00 36.80 2.74
4291 4455 6.747125 ACATGTGTTGCATTTCATTTACAGA 58.253 32.000 0.00 0.00 35.19 3.41
4292 4456 7.380536 ACATGTGTTGCATTTCATTTACAGAT 58.619 30.769 0.00 0.00 35.19 2.90
4294 4458 6.979465 TGTGTTGCATTTCATTTACAGATGA 58.021 32.000 0.00 0.00 34.37 2.92
4295 4459 7.085746 TGTGTTGCATTTCATTTACAGATGAG 58.914 34.615 0.00 0.00 37.35 2.90
4297 4461 6.209192 TGTTGCATTTCATTTACAGATGAGGT 59.791 34.615 0.00 0.00 37.35 3.85
4298 4462 6.198650 TGCATTTCATTTACAGATGAGGTG 57.801 37.500 0.00 0.00 37.35 4.00
4299 4463 5.711506 TGCATTTCATTTACAGATGAGGTGT 59.288 36.000 0.00 0.00 37.35 4.16
4301 4465 6.749118 GCATTTCATTTACAGATGAGGTGTTC 59.251 38.462 0.00 0.00 37.35 3.18
4303 4467 8.517878 CATTTCATTTACAGATGAGGTGTTCTT 58.482 33.333 0.00 0.00 37.35 2.52
4304 4468 7.439157 TTCATTTACAGATGAGGTGTTCTTG 57.561 36.000 0.00 0.00 37.35 3.02
4306 4470 7.676004 TCATTTACAGATGAGGTGTTCTTGTA 58.324 34.615 0.00 0.00 32.50 2.41
4307 4471 7.819415 TCATTTACAGATGAGGTGTTCTTGTAG 59.181 37.037 0.00 0.00 32.50 2.74
4310 4474 6.026947 ACAGATGAGGTGTTCTTGTAGTAC 57.973 41.667 0.00 0.00 0.00 2.73
4311 4475 5.775701 ACAGATGAGGTGTTCTTGTAGTACT 59.224 40.000 0.00 0.00 0.00 2.73
4312 4476 6.946583 ACAGATGAGGTGTTCTTGTAGTACTA 59.053 38.462 0.00 0.00 0.00 1.82
4313 4477 7.616150 ACAGATGAGGTGTTCTTGTAGTACTAT 59.384 37.037 5.75 0.00 0.00 2.12
4314 4478 8.132362 CAGATGAGGTGTTCTTGTAGTACTATC 58.868 40.741 5.75 1.02 0.00 2.08
4315 4479 7.834681 AGATGAGGTGTTCTTGTAGTACTATCA 59.165 37.037 5.75 3.68 0.00 2.15
4316 4480 7.956328 TGAGGTGTTCTTGTAGTACTATCAT 57.044 36.000 5.75 0.00 0.00 2.45
4317 4481 8.362464 TGAGGTGTTCTTGTAGTACTATCATT 57.638 34.615 5.75 0.00 0.00 2.57
4318 4482 8.251026 TGAGGTGTTCTTGTAGTACTATCATTG 58.749 37.037 5.75 3.64 0.00 2.82
4319 4483 8.135382 AGGTGTTCTTGTAGTACTATCATTGT 57.865 34.615 5.75 0.00 0.00 2.71
4320 4484 9.251440 AGGTGTTCTTGTAGTACTATCATTGTA 57.749 33.333 5.75 0.00 0.00 2.41
4321 4485 9.298774 GGTGTTCTTGTAGTACTATCATTGTAC 57.701 37.037 5.75 1.46 40.19 2.90
4322 4486 9.298774 GTGTTCTTGTAGTACTATCATTGTACC 57.701 37.037 5.75 0.00 40.61 3.34
4326 4490 8.141909 TCTTGTAGTACTATCATTGTACCATGC 58.858 37.037 5.75 0.00 40.61 4.06
4327 4491 7.597288 TGTAGTACTATCATTGTACCATGCT 57.403 36.000 5.75 0.00 40.61 3.79
4328 4492 7.433680 TGTAGTACTATCATTGTACCATGCTG 58.566 38.462 5.75 0.00 40.61 4.41
4329 4493 6.731292 AGTACTATCATTGTACCATGCTGA 57.269 37.500 5.85 0.00 40.61 4.26
4330 4494 7.308450 AGTACTATCATTGTACCATGCTGAT 57.692 36.000 5.85 1.15 40.61 2.90
4331 4495 7.739825 AGTACTATCATTGTACCATGCTGATT 58.260 34.615 5.85 0.00 40.61 2.57
4333 4497 6.000219 ACTATCATTGTACCATGCTGATTCC 59.000 40.000 2.03 0.00 0.00 3.01
4334 4498 3.554934 TCATTGTACCATGCTGATTCCC 58.445 45.455 2.03 0.00 0.00 3.97
4335 4499 3.202818 TCATTGTACCATGCTGATTCCCT 59.797 43.478 2.03 0.00 0.00 4.20
4337 4501 3.003394 TGTACCATGCTGATTCCCTTG 57.997 47.619 0.00 0.00 0.00 3.61
4338 4502 2.308570 TGTACCATGCTGATTCCCTTGT 59.691 45.455 0.00 0.00 0.00 3.16
4341 4505 3.356290 ACCATGCTGATTCCCTTGTTAC 58.644 45.455 0.00 0.00 0.00 2.50
4342 4506 3.245229 ACCATGCTGATTCCCTTGTTACA 60.245 43.478 0.00 0.00 0.00 2.41
4344 4508 3.788227 TGCTGATTCCCTTGTTACAGT 57.212 42.857 0.00 0.00 0.00 3.55
4345 4509 4.901197 TGCTGATTCCCTTGTTACAGTA 57.099 40.909 0.00 0.00 0.00 2.74
4346 4510 4.575885 TGCTGATTCCCTTGTTACAGTAC 58.424 43.478 0.00 0.00 0.00 2.73
4347 4511 3.617263 GCTGATTCCCTTGTTACAGTACG 59.383 47.826 0.00 0.00 0.00 3.67
4349 4513 5.471556 TGATTCCCTTGTTACAGTACGAA 57.528 39.130 0.00 0.00 0.00 3.85
4350 4514 5.475719 TGATTCCCTTGTTACAGTACGAAG 58.524 41.667 0.00 0.00 0.00 3.79
4351 4515 5.244402 TGATTCCCTTGTTACAGTACGAAGA 59.756 40.000 0.00 0.00 0.00 2.87
4352 4516 4.778534 TCCCTTGTTACAGTACGAAGAG 57.221 45.455 0.00 0.00 0.00 2.85
4353 4517 3.508793 TCCCTTGTTACAGTACGAAGAGG 59.491 47.826 0.00 0.00 0.00 3.69
4354 4518 3.257624 CCCTTGTTACAGTACGAAGAGGT 59.742 47.826 0.00 0.00 0.00 3.85
4355 4519 4.262335 CCCTTGTTACAGTACGAAGAGGTT 60.262 45.833 0.00 0.00 0.00 3.50
4356 4520 4.684703 CCTTGTTACAGTACGAAGAGGTTG 59.315 45.833 0.00 0.00 0.00 3.77
4357 4521 3.645884 TGTTACAGTACGAAGAGGTTGC 58.354 45.455 0.00 0.00 0.00 4.17
4358 4522 2.991866 GTTACAGTACGAAGAGGTTGCC 59.008 50.000 0.00 0.00 0.00 4.52
4359 4523 1.339097 ACAGTACGAAGAGGTTGCCT 58.661 50.000 0.00 0.00 36.03 4.75
4360 4524 1.000955 ACAGTACGAAGAGGTTGCCTG 59.999 52.381 0.00 0.00 31.76 4.85
4366 4530 1.609061 CGAAGAGGTTGCCTGTCACAT 60.609 52.381 0.00 0.00 31.76 3.21
4377 4541 2.854424 GCCTGTCACATTCACAACGTTG 60.854 50.000 26.20 26.20 0.00 4.10
4385 4549 1.848652 TTCACAACGTTGGGGGAAAA 58.151 45.000 29.17 14.06 30.87 2.29
4386 4550 2.074729 TCACAACGTTGGGGGAAAAT 57.925 45.000 29.17 4.26 30.87 1.82
4387 4551 1.683917 TCACAACGTTGGGGGAAAATG 59.316 47.619 29.17 16.37 30.87 2.32
4388 4552 1.683917 CACAACGTTGGGGGAAAATGA 59.316 47.619 30.34 0.00 0.00 2.57
4403 4865 7.441836 GGGGAAAATGACTTTGTAAGAAACAT 58.558 34.615 0.00 0.00 38.10 2.71
4412 4874 8.826710 TGACTTTGTAAGAAACATCAGTTACAG 58.173 33.333 0.00 0.00 38.10 2.74
4413 4875 7.639945 ACTTTGTAAGAAACATCAGTTACAGC 58.360 34.615 0.00 0.00 38.10 4.40
4419 4881 6.346477 AGAAACATCAGTTACAGCTCTACA 57.654 37.500 0.00 0.00 36.84 2.74
4426 4888 7.332926 ACATCAGTTACAGCTCTACAAAATCAG 59.667 37.037 0.00 0.00 0.00 2.90
4434 4896 6.205658 ACAGCTCTACAAAATCAGAAGGAAAC 59.794 38.462 0.00 0.00 0.00 2.78
4456 4918 8.962884 AAACCAAAAGATTTAAGCACATTTCT 57.037 26.923 0.00 0.00 0.00 2.52
4458 4920 7.955918 ACCAAAAGATTTAAGCACATTTCTCT 58.044 30.769 0.00 0.00 0.00 3.10
4473 4935 7.649705 GCACATTTCTCTATCTTCGATGAACTA 59.350 37.037 4.98 0.00 0.00 2.24
4476 4938 7.883391 TTTCTCTATCTTCGATGAACTACCT 57.117 36.000 4.98 0.00 0.00 3.08
4491 4953 3.934068 ACTACCTACACAAACCCAATCG 58.066 45.455 0.00 0.00 0.00 3.34
4495 4957 3.181448 ACCTACACAAACCCAATCGTTCT 60.181 43.478 0.00 0.00 0.00 3.01
4500 4962 4.939439 ACACAAACCCAATCGTTCTATACC 59.061 41.667 0.00 0.00 0.00 2.73
4510 4972 6.702723 CCAATCGTTCTATACCGAAACCATAA 59.297 38.462 0.00 0.00 36.57 1.90
4513 4975 9.985730 AATCGTTCTATACCGAAACCATAAATA 57.014 29.630 0.00 0.00 36.57 1.40
4525 4988 7.908082 CCGAAACCATAAATATATAATGCCACG 59.092 37.037 3.47 0.00 0.00 4.94
4535 4998 2.697431 TAATGCCACGCAACAAAGAC 57.303 45.000 0.00 0.00 43.62 3.01
4566 5029 2.306341 TTCTAGCAGCACATCAGAGC 57.694 50.000 0.00 0.00 0.00 4.09
4587 5050 4.456911 AGCACAAGATTTCAGTACCACATG 59.543 41.667 0.00 0.00 0.00 3.21
4605 5070 6.017109 ACCACATGACTTGTCTCATTACAAAC 60.017 38.462 0.00 0.00 38.81 2.93
4620 5085 5.499139 TTACAAACAAGAGTTTCTGCAGG 57.501 39.130 15.13 0.00 45.80 4.85
4623 5088 0.475906 ACAAGAGTTTCTGCAGGGCT 59.524 50.000 15.13 9.52 0.00 5.19
4624 5089 1.163554 CAAGAGTTTCTGCAGGGCTC 58.836 55.000 15.13 17.41 0.00 4.70
4625 5090 1.063183 AAGAGTTTCTGCAGGGCTCT 58.937 50.000 21.45 21.45 38.06 4.09
4626 5091 1.944177 AGAGTTTCTGCAGGGCTCTA 58.056 50.000 23.96 0.77 35.09 2.43
4627 5092 1.830477 AGAGTTTCTGCAGGGCTCTAG 59.170 52.381 23.96 0.00 35.09 2.43
4629 5094 1.830477 AGTTTCTGCAGGGCTCTAGAG 59.170 52.381 15.85 15.85 0.00 2.43
4630 5095 1.552792 GTTTCTGCAGGGCTCTAGAGT 59.447 52.381 20.75 0.00 0.00 3.24
4631 5096 1.479709 TTCTGCAGGGCTCTAGAGTC 58.520 55.000 20.75 18.67 0.00 3.36
4645 5110 8.719645 GGCTCTAGAGTCCCATATAATGATAT 57.280 38.462 20.75 0.00 0.00 1.63
4646 5111 8.802267 GGCTCTAGAGTCCCATATAATGATATC 58.198 40.741 20.75 0.00 0.00 1.63
4647 5112 8.802267 GCTCTAGAGTCCCATATAATGATATCC 58.198 40.741 20.75 0.00 0.00 2.59
4648 5113 9.308000 CTCTAGAGTCCCATATAATGATATCCC 57.692 40.741 11.89 0.00 0.00 3.85
4649 5114 8.801645 TCTAGAGTCCCATATAATGATATCCCA 58.198 37.037 0.00 0.00 0.00 4.37
4650 5115 9.439461 CTAGAGTCCCATATAATGATATCCCAA 57.561 37.037 0.00 0.00 0.00 4.12
4651 5116 8.700145 AGAGTCCCATATAATGATATCCCAAA 57.300 34.615 0.00 0.00 0.00 3.28
4652 5117 9.127560 AGAGTCCCATATAATGATATCCCAAAA 57.872 33.333 0.00 0.00 0.00 2.44
4653 5118 9.401058 GAGTCCCATATAATGATATCCCAAAAG 57.599 37.037 0.00 0.00 0.00 2.27
4654 5119 9.127560 AGTCCCATATAATGATATCCCAAAAGA 57.872 33.333 0.00 0.00 0.00 2.52
4655 5120 9.753674 GTCCCATATAATGATATCCCAAAAGAA 57.246 33.333 0.00 0.00 0.00 2.52
4656 5121 9.979897 TCCCATATAATGATATCCCAAAAGAAG 57.020 33.333 0.00 0.00 0.00 2.85
4657 5122 9.979897 CCCATATAATGATATCCCAAAAGAAGA 57.020 33.333 0.00 0.00 0.00 2.87
4662 5127 9.713684 ATAATGATATCCCAAAAGAAGAACCAA 57.286 29.630 0.00 0.00 0.00 3.67
4663 5128 6.834168 TGATATCCCAAAAGAAGAACCAAC 57.166 37.500 0.00 0.00 0.00 3.77
4664 5129 6.552008 TGATATCCCAAAAGAAGAACCAACT 58.448 36.000 0.00 0.00 0.00 3.16
4665 5130 6.434028 TGATATCCCAAAAGAAGAACCAACTG 59.566 38.462 0.00 0.00 0.00 3.16
4666 5131 2.693074 TCCCAAAAGAAGAACCAACTGC 59.307 45.455 0.00 0.00 0.00 4.40
4667 5132 2.695147 CCCAAAAGAAGAACCAACTGCT 59.305 45.455 0.00 0.00 0.00 4.24
4679 5144 3.290710 ACCAACTGCTTGTCATTTCACT 58.709 40.909 0.00 0.00 0.00 3.41
4683 5148 4.623932 ACTGCTTGTCATTTCACTAGGA 57.376 40.909 0.00 0.00 0.00 2.94
4688 5153 5.246203 TGCTTGTCATTTCACTAGGACTAGT 59.754 40.000 6.19 6.19 46.52 2.57
4694 5159 5.246203 TCATTTCACTAGGACTAGTTGCAGT 59.754 40.000 9.20 0.00 43.35 4.40
4698 5163 3.258372 CACTAGGACTAGTTGCAGTTGGA 59.742 47.826 9.20 0.00 43.35 3.53
4709 5174 1.894466 TGCAGTTGGATTGGGTTCATG 59.106 47.619 0.00 0.00 0.00 3.07
4710 5175 2.170166 GCAGTTGGATTGGGTTCATGA 58.830 47.619 0.00 0.00 0.00 3.07
4712 5177 3.424703 CAGTTGGATTGGGTTCATGAGT 58.575 45.455 0.00 0.00 0.00 3.41
4713 5178 3.441572 CAGTTGGATTGGGTTCATGAGTC 59.558 47.826 0.00 0.00 0.00 3.36
4715 5180 3.354948 TGGATTGGGTTCATGAGTCAG 57.645 47.619 0.00 0.00 0.00 3.51
4717 5182 2.648059 GATTGGGTTCATGAGTCAGGG 58.352 52.381 4.73 0.00 0.00 4.45
4719 5184 1.077429 GGGTTCATGAGTCAGGGCC 60.077 63.158 4.73 7.73 0.00 5.80
4742 5241 3.620488 ACATGCTGTGTTATAACCCAGG 58.380 45.455 23.89 13.25 38.01 4.45
4767 5266 0.036765 GTCCATAAGGTGACACCGCA 60.037 55.000 18.93 11.04 44.90 5.69
4818 5317 1.135960 TGACCACCTTGGATGTGTCA 58.864 50.000 0.00 0.00 40.96 3.58
4872 5371 4.794169 CAGTACACAACCAATTTACCTGC 58.206 43.478 0.00 0.00 0.00 4.85
4880 5379 5.957774 ACAACCAATTTACCTGCCAAGATAT 59.042 36.000 0.00 0.00 0.00 1.63
4881 5380 6.127366 ACAACCAATTTACCTGCCAAGATATG 60.127 38.462 0.00 0.00 0.00 1.78
4911 5410 9.585099 CAGAGATCAGTATTATGCCTAGAAATC 57.415 37.037 0.00 0.00 0.00 2.17
4921 5420 3.966979 TGCCTAGAAATCTCAATGGCAA 58.033 40.909 13.27 0.00 44.67 4.52
4922 5421 3.949754 TGCCTAGAAATCTCAATGGCAAG 59.050 43.478 13.27 0.00 44.67 4.01
4923 5422 4.202441 GCCTAGAAATCTCAATGGCAAGA 58.798 43.478 0.00 0.00 38.79 3.02
4928 5427 6.705863 AGAAATCTCAATGGCAAGATAACC 57.294 37.500 0.81 0.00 32.01 2.85
4934 5433 5.183713 TCTCAATGGCAAGATAACCAACAAG 59.816 40.000 0.00 0.00 39.96 3.16
4935 5434 5.076182 TCAATGGCAAGATAACCAACAAGA 58.924 37.500 0.00 0.00 39.96 3.02
4938 5437 6.699575 ATGGCAAGATAACCAACAAGATAC 57.300 37.500 0.00 0.00 39.96 2.24
4939 5438 4.634004 TGGCAAGATAACCAACAAGATACG 59.366 41.667 0.00 0.00 31.46 3.06
4947 5454 3.275999 ACCAACAAGATACGGTATTGGC 58.724 45.455 14.41 0.00 40.23 4.52
4949 5456 2.933906 CAACAAGATACGGTATTGGCGT 59.066 45.455 1.57 0.00 33.34 5.68
4964 5471 3.676091 GCGTTGTTAGTGCCACATC 57.324 52.632 0.00 0.00 0.00 3.06
4967 5474 2.348666 GCGTTGTTAGTGCCACATCTAG 59.651 50.000 0.00 0.00 0.00 2.43
4983 5490 7.433425 GCCACATCTAGCAAAAGACAATAATTC 59.567 37.037 0.00 0.00 0.00 2.17
4992 5499 9.986833 AGCAAAAGACAATAATTCAAACAAAAC 57.013 25.926 0.00 0.00 0.00 2.43
5004 5511 5.751243 TCAAACAAAACTGAAGGTCTAGC 57.249 39.130 0.00 0.00 0.00 3.42
5007 5514 6.482308 TCAAACAAAACTGAAGGTCTAGCTAC 59.518 38.462 0.00 0.00 0.00 3.58
5008 5515 5.546621 ACAAAACTGAAGGTCTAGCTACA 57.453 39.130 0.00 0.00 0.00 2.74
5040 5547 6.244654 TCTTCACATCAATATCCAACACCAA 58.755 36.000 0.00 0.00 0.00 3.67
5054 5561 4.022068 CCAACACCAATTCACTATTGCTGT 60.022 41.667 0.00 0.00 42.23 4.40
5158 5665 1.680735 TCACCAAACGCTGAAAATGCT 59.319 42.857 0.00 0.00 0.00 3.79
5170 5677 4.479619 CTGAAAATGCTCTGTTAAGTGGC 58.520 43.478 0.00 0.00 0.00 5.01
5189 5696 6.476378 AGTGGCTAATTAGTGAAACAGTGAT 58.524 36.000 13.91 0.00 41.43 3.06
5193 5700 9.542462 TGGCTAATTAGTGAAACAGTGATATAC 57.458 33.333 13.91 0.00 41.43 1.47
5195 5702 8.215132 GCTAATTAGTGAAACAGTGATATACGC 58.785 37.037 13.91 0.00 41.43 4.42
5204 5711 4.181578 ACAGTGATATACGCAAGGAACAC 58.818 43.478 0.00 0.00 46.39 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 2.439156 AAGAGGCCGGCATGAAGC 60.439 61.111 30.85 9.43 44.65 3.86
17 18 4.496336 GCTCCAAGAGGCCGGCAT 62.496 66.667 30.85 24.69 33.74 4.40
25 26 3.123620 GCTGGCACGCTCCAAGAG 61.124 66.667 0.00 0.00 35.36 2.85
82 83 1.227263 CGCCATTACCAGGGACTCG 60.227 63.158 0.00 0.00 34.60 4.18
93 94 2.203337 GCATCCAGGCCGCCATTA 60.203 61.111 13.15 0.00 0.00 1.90
110 111 2.100584 AGCTCATAGAGTTCTTCAGCGG 59.899 50.000 0.00 0.00 31.39 5.52
112 113 4.654091 AGAGCTCATAGAGTTCTTCAGC 57.346 45.455 17.77 0.00 45.43 4.26
171 172 4.120085 CCGAAGCCAACGGGTATC 57.880 61.111 0.00 0.00 45.65 2.24
214 215 4.785453 CTGCGGGGTTCTCTGCCC 62.785 72.222 0.80 0.00 45.35 5.36
230 231 2.755876 TCTCCATCGCGCTCCACT 60.756 61.111 5.56 0.00 0.00 4.00
252 253 0.035152 TTCGGTGGCATCTGCAGATT 60.035 50.000 26.70 9.54 44.36 2.40
261 262 1.754234 GCCCTGAATTCGGTGGCAT 60.754 57.895 28.17 0.00 38.01 4.40
265 266 1.089920 CTGAAGCCCTGAATTCGGTG 58.910 55.000 13.23 2.80 0.00 4.94
269 270 2.675348 CGAAGTCTGAAGCCCTGAATTC 59.325 50.000 0.00 0.00 41.37 2.17
301 302 2.303175 CCTTCCAACCTGACCGAAAAA 58.697 47.619 0.00 0.00 0.00 1.94
302 303 1.477923 CCCTTCCAACCTGACCGAAAA 60.478 52.381 0.00 0.00 0.00 2.29
303 304 0.109723 CCCTTCCAACCTGACCGAAA 59.890 55.000 0.00 0.00 0.00 3.46
313 423 3.493767 AGTTTCAGTCTCCCTTCCAAC 57.506 47.619 0.00 0.00 0.00 3.77
317 427 5.105513 CCTCTCTTAGTTTCAGTCTCCCTTC 60.106 48.000 0.00 0.00 0.00 3.46
321 431 4.345854 TCCCTCTCTTAGTTTCAGTCTCC 58.654 47.826 0.00 0.00 0.00 3.71
324 434 3.118920 GGCTCCCTCTCTTAGTTTCAGTC 60.119 52.174 0.00 0.00 0.00 3.51
333 443 0.326522 TGCCATGGCTCCCTCTCTTA 60.327 55.000 35.53 10.21 42.51 2.10
342 452 4.536316 CAGTCTCTGCCATGGCTC 57.464 61.111 35.53 19.90 42.51 4.70
396 509 9.515226 ACATTGGTGAATACATTTTGTACTAGT 57.485 29.630 0.00 0.00 35.42 2.57
414 574 0.390603 CCTGCATTGCCACATTGGTG 60.391 55.000 6.12 0.00 44.85 4.17
419 579 1.473497 TTGTGCCTGCATTGCCACAT 61.473 50.000 16.48 0.00 0.00 3.21
420 580 1.473497 ATTGTGCCTGCATTGCCACA 61.473 50.000 13.12 13.12 0.00 4.17
422 582 1.186267 TCATTGTGCCTGCATTGCCA 61.186 50.000 6.12 0.00 0.00 4.92
430 590 1.403647 CCATTGCAGTCATTGTGCCTG 60.404 52.381 0.00 0.00 40.43 4.85
432 592 0.604578 ACCATTGCAGTCATTGTGCC 59.395 50.000 0.00 0.00 40.43 5.01
433 593 1.705256 CACCATTGCAGTCATTGTGC 58.295 50.000 0.00 0.00 41.59 4.57
445 605 6.942005 TGATATATAGGAAACAGGCACCATTG 59.058 38.462 0.00 0.00 0.00 2.82
446 606 7.090319 TGATATATAGGAAACAGGCACCATT 57.910 36.000 0.00 0.00 0.00 3.16
447 607 6.702449 TGATATATAGGAAACAGGCACCAT 57.298 37.500 0.00 0.00 0.00 3.55
448 608 6.702449 ATGATATATAGGAAACAGGCACCA 57.298 37.500 0.00 0.00 0.00 4.17
449 609 9.515226 TTTAATGATATATAGGAAACAGGCACC 57.485 33.333 0.00 0.00 0.00 5.01
451 611 9.214957 CGTTTAATGATATATAGGAAACAGGCA 57.785 33.333 10.32 0.00 0.00 4.75
452 612 8.175716 GCGTTTAATGATATATAGGAAACAGGC 58.824 37.037 10.32 5.35 0.00 4.85
453 613 9.214957 TGCGTTTAATGATATATAGGAAACAGG 57.785 33.333 10.32 0.00 0.00 4.00
455 615 9.772973 AGTGCGTTTAATGATATATAGGAAACA 57.227 29.630 10.32 0.00 0.00 2.83
467 627 8.876790 GGTTAGTTAGTTAGTGCGTTTAATGAT 58.123 33.333 0.00 0.00 0.00 2.45
468 628 8.090214 AGGTTAGTTAGTTAGTGCGTTTAATGA 58.910 33.333 0.00 0.00 0.00 2.57
469 629 8.248117 AGGTTAGTTAGTTAGTGCGTTTAATG 57.752 34.615 0.00 0.00 0.00 1.90
470 630 8.715088 CAAGGTTAGTTAGTTAGTGCGTTTAAT 58.285 33.333 0.00 0.00 0.00 1.40
471 631 7.925483 TCAAGGTTAGTTAGTTAGTGCGTTTAA 59.075 33.333 0.00 0.00 0.00 1.52
472 632 7.432869 TCAAGGTTAGTTAGTTAGTGCGTTTA 58.567 34.615 0.00 0.00 0.00 2.01
473 633 6.282930 TCAAGGTTAGTTAGTTAGTGCGTTT 58.717 36.000 0.00 0.00 0.00 3.60
474 634 5.846203 TCAAGGTTAGTTAGTTAGTGCGTT 58.154 37.500 0.00 0.00 0.00 4.84
475 635 5.458041 TCAAGGTTAGTTAGTTAGTGCGT 57.542 39.130 0.00 0.00 0.00 5.24
476 636 6.097356 TCATCAAGGTTAGTTAGTTAGTGCG 58.903 40.000 0.00 0.00 0.00 5.34
477 637 7.817962 TCTTCATCAAGGTTAGTTAGTTAGTGC 59.182 37.037 0.00 0.00 0.00 4.40
478 638 9.877178 ATCTTCATCAAGGTTAGTTAGTTAGTG 57.123 33.333 0.00 0.00 0.00 2.74
479 639 9.877178 CATCTTCATCAAGGTTAGTTAGTTAGT 57.123 33.333 0.00 0.00 0.00 2.24
480 640 9.877178 ACATCTTCATCAAGGTTAGTTAGTTAG 57.123 33.333 0.00 0.00 0.00 2.34
485 645 8.816894 AGAGAACATCTTCATCAAGGTTAGTTA 58.183 33.333 0.00 0.00 32.99 2.24
486 646 7.684529 AGAGAACATCTTCATCAAGGTTAGTT 58.315 34.615 0.00 0.00 32.99 2.24
490 650 6.983307 CGATAGAGAACATCTTCATCAAGGTT 59.017 38.462 0.00 0.00 39.64 3.50
553 713 0.536006 CCCGGATCATTTGCTCTCCC 60.536 60.000 0.73 0.00 0.00 4.30
598 758 1.674962 GCAGCATCACCAAATCTCTCC 59.325 52.381 0.00 0.00 0.00 3.71
624 784 5.454613 GGAGAGAGAAGAAATGGGAGGAATC 60.455 48.000 0.00 0.00 0.00 2.52
640 800 4.230733 TCATTGGTAGAGGAAGGAGAGAGA 59.769 45.833 0.00 0.00 0.00 3.10
647 807 2.500098 TCGGTTCATTGGTAGAGGAAGG 59.500 50.000 0.00 0.00 0.00 3.46
656 816 1.244019 GCCAGCTTCGGTTCATTGGT 61.244 55.000 0.00 0.00 0.00 3.67
661 821 2.347490 GAGGCCAGCTTCGGTTCA 59.653 61.111 5.01 0.00 0.00 3.18
674 834 0.250901 TTGGAGAACAGCAAGGAGGC 60.251 55.000 0.00 0.00 0.00 4.70
691 851 0.110056 GCGCAACTGTCACTCCATTG 60.110 55.000 0.30 0.00 0.00 2.82
708 868 0.993746 GCGCAAACAGAACAAGAGCG 60.994 55.000 0.30 0.00 45.68 5.03
715 875 2.605366 GAGGATAGAGCGCAAACAGAAC 59.395 50.000 11.47 0.00 0.00 3.01
716 876 2.497675 AGAGGATAGAGCGCAAACAGAA 59.502 45.455 11.47 0.00 0.00 3.02
722 882 1.683917 GAGGAAGAGGATAGAGCGCAA 59.316 52.381 11.47 0.00 0.00 4.85
723 883 1.323412 GAGGAAGAGGATAGAGCGCA 58.677 55.000 11.47 0.00 0.00 6.09
725 885 1.269448 GCTGAGGAAGAGGATAGAGCG 59.731 57.143 0.00 0.00 0.00 5.03
755 915 3.947196 TCATGGACTGCATCATTTACCAC 59.053 43.478 0.00 0.00 0.00 4.16
833 997 6.040842 ACACAAGTTAGTTACGGTCCTTTCTA 59.959 38.462 0.00 0.00 0.00 2.10
853 1017 7.661968 TCCGGAAAATTCATAAAATGACACAA 58.338 30.769 0.00 0.00 39.39 3.33
865 1029 2.358898 CCTCGCATTCCGGAAAATTCAT 59.641 45.455 23.08 0.00 37.59 2.57
867 1031 1.065551 CCCTCGCATTCCGGAAAATTC 59.934 52.381 23.08 9.41 37.59 2.17
869 1033 0.254747 TCCCTCGCATTCCGGAAAAT 59.745 50.000 23.08 1.87 37.59 1.82
874 1038 3.680620 TTGCTCCCTCGCATTCCGG 62.681 63.158 0.00 0.00 40.04 5.14
888 1052 3.557686 GGTTGATTCTTTGGCCATTTGCT 60.558 43.478 6.09 0.00 40.92 3.91
905 1069 5.428457 TGGATAGCTTTCTGGATTAGGTTGA 59.572 40.000 4.10 0.00 0.00 3.18
908 1072 6.302269 CAATGGATAGCTTTCTGGATTAGGT 58.698 40.000 4.10 0.00 0.00 3.08
934 1098 2.029964 TCGGCGTGGTTTGGTCTC 59.970 61.111 6.85 0.00 0.00 3.36
958 1122 3.784883 TCAAATTTTGCCGCGAAATTG 57.215 38.095 25.43 19.69 37.47 2.32
986 1150 3.414193 CCATGGGAGCTGGAGGCA 61.414 66.667 2.85 0.00 44.79 4.75
987 1151 4.891037 GCCATGGGAGCTGGAGGC 62.891 72.222 15.13 0.00 42.19 4.70
988 1152 4.559063 CGCCATGGGAGCTGGAGG 62.559 72.222 15.13 0.00 35.70 4.30
989 1153 3.473647 TCGCCATGGGAGCTGGAG 61.474 66.667 15.13 0.00 35.70 3.86
990 1154 3.785859 GTCGCCATGGGAGCTGGA 61.786 66.667 15.13 0.00 35.70 3.86
1124 1288 3.612247 GAAGCGGCTGCCTCCAAGA 62.612 63.158 15.55 0.00 44.31 3.02
1175 1339 1.898094 TTCACGTCGGAACTCGGGA 60.898 57.895 0.00 0.00 37.71 5.14
1227 1391 2.335712 CCTCAAAGCCTCCGCCAAC 61.336 63.158 0.00 0.00 34.57 3.77
1306 1470 1.276421 ACCTTCCAACGACCTCATCTG 59.724 52.381 0.00 0.00 0.00 2.90
1323 1487 3.009584 GGAAATGAACTCTCTTCCCACCT 59.990 47.826 0.00 0.00 32.71 4.00
1337 1501 1.974265 TGCACGAACCAGGAAATGAA 58.026 45.000 0.00 0.00 0.00 2.57
1338 1502 2.083774 GATGCACGAACCAGGAAATGA 58.916 47.619 0.00 0.00 0.00 2.57
1353 1517 0.178967 TTGTTCCAAGGCCAGATGCA 60.179 50.000 5.01 0.00 43.89 3.96
1370 1534 4.232221 GAGAACACTGTCCATTGCATTTG 58.768 43.478 0.00 0.00 0.00 2.32
1372 1536 2.485426 CGAGAACACTGTCCATTGCATT 59.515 45.455 0.00 0.00 0.00 3.56
1376 1540 1.442769 CCCGAGAACACTGTCCATTG 58.557 55.000 0.00 0.00 0.00 2.82
1444 1608 2.916111 CATTTCGTCAAACACCCTTCG 58.084 47.619 0.00 0.00 0.00 3.79
1485 1649 1.998315 CTCATCAGAGCAGTCCAAACG 59.002 52.381 0.00 0.00 34.61 3.60
1544 1708 3.868077 GCAGTGCATCCTACTAAACAGAG 59.132 47.826 11.09 0.00 0.00 3.35
1545 1709 3.515502 AGCAGTGCATCCTACTAAACAGA 59.484 43.478 19.20 0.00 0.00 3.41
1554 1718 0.909133 TCCCACAGCAGTGCATCCTA 60.909 55.000 19.20 0.00 44.53 2.94
1556 1720 0.682209 AATCCCACAGCAGTGCATCC 60.682 55.000 19.20 0.00 44.53 3.51
1573 1737 0.870307 GCGTATGCGTCTGGTCGAAT 60.870 55.000 4.81 0.00 40.81 3.34
1581 1745 0.178068 AGGAAATGGCGTATGCGTCT 59.822 50.000 9.69 0.00 44.07 4.18
1591 1755 0.881118 TTCAAGACGCAGGAAATGGC 59.119 50.000 0.00 0.00 0.00 4.40
1650 1814 3.009143 ACTTCTCAAGGTACCCATGAACC 59.991 47.826 16.41 0.00 35.91 3.62
1695 1859 2.093341 AGCCATCAATGCATTTCCAACC 60.093 45.455 9.83 0.00 0.00 3.77
1758 1922 1.135575 CGCTGAGGCATTCCTTCAAAC 60.136 52.381 0.00 0.00 44.46 2.93
1815 1979 4.087907 TGTCATGCCATCCATTTGAGAAA 58.912 39.130 0.00 0.00 29.71 2.52
1818 1982 2.361119 CCTGTCATGCCATCCATTTGAG 59.639 50.000 0.00 0.00 29.71 3.02
1835 1999 1.708341 AAAATGCTCAACAGCCCTGT 58.292 45.000 0.00 0.00 46.26 4.00
1854 2018 2.935238 GCCTTCAAACCACATCTCGCTA 60.935 50.000 0.00 0.00 0.00 4.26
1860 2024 0.890683 CCAGGCCTTCAAACCACATC 59.109 55.000 0.00 0.00 0.00 3.06
1890 2054 2.533266 AAACACTGAGCATCGTCACT 57.467 45.000 0.00 0.00 38.61 3.41
1917 2081 5.500234 AGCTCATAACCTAATTCAGCACAA 58.500 37.500 0.00 0.00 0.00 3.33
1935 2099 3.777106 ATCACTCTTCCAACAAGCTCA 57.223 42.857 0.00 0.00 0.00 4.26
1962 2126 8.037758 CAGAGTAATCCAGTTTTCACAGAGTAT 58.962 37.037 0.00 0.00 0.00 2.12
1986 2150 0.536260 CCAGAGACTCAAGCTCCCAG 59.464 60.000 5.02 0.00 32.82 4.45
2002 2166 6.550854 AGATTTTCATCTACTCCTCTCTCCAG 59.449 42.308 0.00 0.00 38.06 3.86
2070 2234 1.746615 CACCTTGCGTGCATAGCCT 60.747 57.895 13.41 0.00 35.18 4.58
2082 2246 3.979948 TGACATTGCATCAAACACCTTG 58.020 40.909 0.00 0.00 36.25 3.61
2088 2252 5.443693 GCTTTTCGATGACATTGCATCAAAC 60.444 40.000 16.14 0.00 43.76 2.93
2113 2277 8.982685 CATTAGTAGATTCCACACATGTATGTC 58.017 37.037 2.97 0.00 39.39 3.06
2114 2278 7.933577 CCATTAGTAGATTCCACACATGTATGT 59.066 37.037 2.97 0.00 42.84 2.29
2136 2300 1.078656 ACCTTTGCATACCCACCCATT 59.921 47.619 0.00 0.00 0.00 3.16
2265 2429 0.471617 CTAGGCCATCCCTTCCACTG 59.528 60.000 5.01 0.00 43.06 3.66
2270 2434 0.919710 AACCACTAGGCCATCCCTTC 59.080 55.000 5.01 0.00 43.06 3.46
2271 2435 0.919710 GAACCACTAGGCCATCCCTT 59.080 55.000 5.01 0.00 43.06 3.95
2310 2474 0.817013 CACACTGTGCACCAAAACCT 59.183 50.000 15.69 0.00 0.00 3.50
2370 2534 4.398358 ACCAAGATTGCATCTTCAGTCATG 59.602 41.667 8.01 0.00 46.17 3.07
2386 2550 3.196254 GGCATTCCATCAAACACCAAGAT 59.804 43.478 0.00 0.00 0.00 2.40
2394 2558 2.945008 TCGATGAGGCATTCCATCAAAC 59.055 45.455 0.00 0.00 39.17 2.93
2424 2588 5.514484 GCCACTGATGATAGAATTCCAGGAT 60.514 44.000 0.65 0.00 0.00 3.24
2427 2591 4.755629 CAGCCACTGATGATAGAATTCCAG 59.244 45.833 0.65 3.83 32.44 3.86
2484 2648 9.010029 CCTTGTAACCACATTCTTACAAATAGT 57.990 33.333 4.93 0.00 40.57 2.12
2567 2731 2.225908 ACTCTCCCTAGGAACCAATGGT 60.226 50.000 11.48 0.00 37.65 3.55
2577 2741 0.818296 CGTGAACCACTCTCCCTAGG 59.182 60.000 0.06 0.06 31.34 3.02
2589 2753 0.963962 TCACAGAGTACCCGTGAACC 59.036 55.000 7.04 0.00 36.75 3.62
2595 2759 2.413837 CCAGTTTTCACAGAGTACCCG 58.586 52.381 0.00 0.00 0.00 5.28
2601 2765 2.654863 ACCAACCCAGTTTTCACAGAG 58.345 47.619 0.00 0.00 0.00 3.35
2616 2780 4.390297 GCAAGAGATGTCTCACTTACCAAC 59.610 45.833 12.21 0.00 45.21 3.77
2620 2784 7.038659 ACATTAGCAAGAGATGTCTCACTTAC 58.961 38.462 12.21 0.00 45.21 2.34
2622 2786 6.047511 ACATTAGCAAGAGATGTCTCACTT 57.952 37.500 12.21 0.00 45.21 3.16
2623 2787 5.674052 ACATTAGCAAGAGATGTCTCACT 57.326 39.130 12.21 8.59 45.21 3.41
2625 2789 6.291648 AGAACATTAGCAAGAGATGTCTCA 57.708 37.500 12.21 0.00 45.21 3.27
2637 2801 7.941919 AGTACATATCGAGAAGAACATTAGCA 58.058 34.615 0.00 0.00 0.00 3.49
2652 2816 7.649370 ATCTGAGCAATTTGAGTACATATCG 57.351 36.000 0.00 0.00 0.00 2.92
2703 2867 5.519722 ACAACGTTTTTCTCATCCATGTTC 58.480 37.500 0.00 0.00 0.00 3.18
2706 2870 5.049474 TGAGACAACGTTTTTCTCATCCATG 60.049 40.000 25.46 4.73 40.65 3.66
2713 2877 4.773510 GTCCATGAGACAACGTTTTTCTC 58.226 43.478 22.04 22.04 45.55 2.87
2791 2955 3.444742 CCATCTAGTGCCATTTCTTGCAA 59.555 43.478 0.00 0.00 39.57 4.08
2793 2957 3.019564 ACCATCTAGTGCCATTTCTTGC 58.980 45.455 0.00 0.00 0.00 4.01
2900 3064 5.713389 TCCATTCCATTTCTGATGGCATATC 59.287 40.000 0.00 0.00 39.01 1.63
2952 3116 3.665409 CGCATTTCGCATACATTTCCATC 59.335 43.478 0.00 0.00 42.60 3.51
2973 3137 2.880890 CCTTGCTTCCTCCATATTTCCG 59.119 50.000 0.00 0.00 0.00 4.30
2979 3143 4.591321 AATCAACCTTGCTTCCTCCATA 57.409 40.909 0.00 0.00 0.00 2.74
3110 3274 1.743772 CGGCATTAGGTCTGAACTGGG 60.744 57.143 5.25 0.00 0.00 4.45
3114 3278 2.000447 GTCACGGCATTAGGTCTGAAC 59.000 52.381 0.00 0.00 0.00 3.18
3183 3347 1.451028 GGTGTGCATCTCTCTGCCC 60.451 63.158 0.00 0.00 41.58 5.36
3204 3368 1.101331 AGTACCCTCTTCGTAAGGCG 58.899 55.000 0.00 0.00 43.01 5.52
3293 3457 0.738389 CAACCTGTCAAACAGCCGTT 59.262 50.000 1.49 0.00 44.63 4.44
3317 3481 3.054802 GGTCCATGAGATGAGGTTCTTGT 60.055 47.826 0.00 0.00 0.00 3.16
3422 3586 1.626356 TAAAGAGGCTGCATCCGGCT 61.626 55.000 11.08 0.00 45.15 5.52
3426 3590 1.403323 GCACTTAAAGAGGCTGCATCC 59.597 52.381 11.08 0.00 0.00 3.51
3474 3638 0.106469 TCCATCCCTCGTCTCTCAGG 60.106 60.000 0.00 0.00 0.00 3.86
3495 3659 0.043822 GACGCATCGCATCGAAGAAC 60.044 55.000 0.00 0.00 43.58 3.01
3582 3746 4.652822 ACTCGTAAGCTTCCCTCAAATTT 58.347 39.130 0.00 0.00 37.18 1.82
3639 3803 5.310331 TCCATTCAGCAATGAGACCCATATA 59.690 40.000 0.00 0.00 41.97 0.86
3686 3850 1.153269 GCTACCTCCTCTGCAAGCC 60.153 63.158 0.00 0.00 0.00 4.35
3788 3952 0.107459 CCTCAGCTTCCTTACAGCCC 60.107 60.000 0.00 0.00 38.09 5.19
3804 3968 2.174319 GCCGCCGATCTTGTTCCTC 61.174 63.158 0.00 0.00 0.00 3.71
3825 3989 2.045242 GTTTTCTCCCGGAGCCCC 60.045 66.667 9.87 0.00 0.00 5.80
3828 3992 2.041115 GCCAGTTTTCTCCCGGAGC 61.041 63.158 9.87 0.00 0.00 4.70
3886 4050 4.681978 ACTCCGGTTGCCTGCGAC 62.682 66.667 0.00 0.65 0.00 5.19
3891 4055 1.918293 TGGATGACTCCGGTTGCCT 60.918 57.895 0.00 0.00 45.37 4.75
3909 4073 1.002134 CGCAATCCTTGTCCCCTGT 60.002 57.895 0.00 0.00 0.00 4.00
3916 4080 0.693049 AGGAACTCCGCAATCCTTGT 59.307 50.000 0.00 0.00 40.70 3.16
3917 4081 1.089920 CAGGAACTCCGCAATCCTTG 58.910 55.000 0.00 0.00 41.63 3.61
3918 4082 0.035056 CCAGGAACTCCGCAATCCTT 60.035 55.000 0.00 0.00 41.63 3.36
3924 4088 0.250234 CTTCATCCAGGAACTCCGCA 59.750 55.000 0.00 0.00 42.08 5.69
3927 4091 2.087646 GCAACTTCATCCAGGAACTCC 58.912 52.381 0.00 0.00 34.60 3.85
4065 4229 1.811266 CGACAGATTCAGCACCCCG 60.811 63.158 0.00 0.00 0.00 5.73
4092 4256 3.391160 CTTCGTCACGCGGATCGGA 62.391 63.158 12.47 5.44 43.86 4.55
4143 4307 4.641541 CACATCTTGGATATGAACTTGGCA 59.358 41.667 0.00 0.00 0.00 4.92
4176 4340 5.410746 CCTGTTCGAATCCCTCAATATGATG 59.589 44.000 0.00 0.00 0.00 3.07
4194 4358 5.841810 TGTTCAAAATGATGGAACCTGTTC 58.158 37.500 1.33 1.33 40.04 3.18
4248 4412 3.506810 TGTTACACAGCAGTTGTTTTGC 58.493 40.909 0.00 0.00 38.16 3.68
4252 4416 3.694072 ACACATGTTACACAGCAGTTGTT 59.306 39.130 0.00 0.00 38.16 2.83
4255 4419 3.489059 GCAACACATGTTACACAGCAGTT 60.489 43.478 0.00 0.00 36.32 3.16
4262 4426 6.768029 AATGAAATGCAACACATGTTACAC 57.232 33.333 0.00 0.00 39.60 2.90
4266 4430 7.208777 TCTGTAAATGAAATGCAACACATGTT 58.791 30.769 0.00 0.00 39.60 2.71
4270 4434 6.979465 TCATCTGTAAATGAAATGCAACACA 58.021 32.000 0.00 0.00 32.80 3.72
4271 4435 6.529125 CCTCATCTGTAAATGAAATGCAACAC 59.471 38.462 0.00 0.00 35.32 3.32
4272 4436 6.209192 ACCTCATCTGTAAATGAAATGCAACA 59.791 34.615 0.00 0.00 35.32 3.33
4273 4437 6.529125 CACCTCATCTGTAAATGAAATGCAAC 59.471 38.462 0.00 0.00 35.32 4.17
4276 4440 6.199937 ACACCTCATCTGTAAATGAAATGC 57.800 37.500 0.00 0.00 35.32 3.56
4277 4441 8.048534 AGAACACCTCATCTGTAAATGAAATG 57.951 34.615 0.00 0.00 35.32 2.32
4278 4442 8.517878 CAAGAACACCTCATCTGTAAATGAAAT 58.482 33.333 0.00 0.00 35.32 2.17
4279 4443 7.502226 ACAAGAACACCTCATCTGTAAATGAAA 59.498 33.333 0.00 0.00 35.32 2.69
4280 4444 6.998074 ACAAGAACACCTCATCTGTAAATGAA 59.002 34.615 0.00 0.00 35.32 2.57
4281 4445 6.533730 ACAAGAACACCTCATCTGTAAATGA 58.466 36.000 0.00 0.00 34.55 2.57
4282 4446 6.808008 ACAAGAACACCTCATCTGTAAATG 57.192 37.500 0.00 0.00 0.00 2.32
4283 4447 7.680730 ACTACAAGAACACCTCATCTGTAAAT 58.319 34.615 0.00 0.00 0.00 1.40
4284 4448 7.062749 ACTACAAGAACACCTCATCTGTAAA 57.937 36.000 0.00 0.00 0.00 2.01
4285 4449 6.665992 ACTACAAGAACACCTCATCTGTAA 57.334 37.500 0.00 0.00 0.00 2.41
4286 4450 6.946583 AGTACTACAAGAACACCTCATCTGTA 59.053 38.462 0.00 0.00 0.00 2.74
4287 4451 5.775701 AGTACTACAAGAACACCTCATCTGT 59.224 40.000 0.00 0.00 0.00 3.41
4288 4452 6.274157 AGTACTACAAGAACACCTCATCTG 57.726 41.667 0.00 0.00 0.00 2.90
4289 4453 7.834681 TGATAGTACTACAAGAACACCTCATCT 59.165 37.037 4.31 0.00 0.00 2.90
4290 4454 7.997482 TGATAGTACTACAAGAACACCTCATC 58.003 38.462 4.31 0.00 0.00 2.92
4291 4455 7.956328 TGATAGTACTACAAGAACACCTCAT 57.044 36.000 4.31 0.00 0.00 2.90
4292 4456 7.956328 ATGATAGTACTACAAGAACACCTCA 57.044 36.000 4.31 1.48 0.00 3.86
4294 4458 8.135382 ACAATGATAGTACTACAAGAACACCT 57.865 34.615 4.31 0.00 0.00 4.00
4295 4459 9.298774 GTACAATGATAGTACTACAAGAACACC 57.701 37.037 4.31 0.00 38.95 4.16
4297 4461 9.027202 TGGTACAATGATAGTACTACAAGAACA 57.973 33.333 4.31 0.24 41.16 3.18
4318 4482 3.004752 ACAAGGGAATCAGCATGGTAC 57.995 47.619 0.00 0.00 36.16 3.34
4319 4483 3.737559 AACAAGGGAATCAGCATGGTA 57.262 42.857 0.00 0.00 36.16 3.25
4320 4484 2.610438 AACAAGGGAATCAGCATGGT 57.390 45.000 0.00 0.00 36.16 3.55
4321 4485 3.355378 TGTAACAAGGGAATCAGCATGG 58.645 45.455 0.00 0.00 36.16 3.66
4322 4486 4.012374 ACTGTAACAAGGGAATCAGCATG 58.988 43.478 0.00 0.00 37.54 4.06
4325 4489 3.617263 CGTACTGTAACAAGGGAATCAGC 59.383 47.826 0.00 0.00 0.00 4.26
4326 4490 5.068234 TCGTACTGTAACAAGGGAATCAG 57.932 43.478 0.00 0.00 0.00 2.90
4327 4491 5.244402 TCTTCGTACTGTAACAAGGGAATCA 59.756 40.000 7.01 0.00 0.00 2.57
4328 4492 5.717119 TCTTCGTACTGTAACAAGGGAATC 58.283 41.667 7.01 0.00 0.00 2.52
4329 4493 5.337330 CCTCTTCGTACTGTAACAAGGGAAT 60.337 44.000 7.98 0.00 0.00 3.01
4330 4494 4.021719 CCTCTTCGTACTGTAACAAGGGAA 60.022 45.833 7.98 0.00 0.00 3.97
4331 4495 3.508793 CCTCTTCGTACTGTAACAAGGGA 59.491 47.826 7.98 0.00 0.00 4.20
4333 4497 4.516365 ACCTCTTCGTACTGTAACAAGG 57.484 45.455 7.01 5.00 0.00 3.61
4334 4498 4.150098 GCAACCTCTTCGTACTGTAACAAG 59.850 45.833 0.00 0.00 0.00 3.16
4335 4499 4.053295 GCAACCTCTTCGTACTGTAACAA 58.947 43.478 0.00 0.00 0.00 2.83
4337 4501 2.991866 GGCAACCTCTTCGTACTGTAAC 59.008 50.000 0.00 0.00 0.00 2.50
4338 4502 2.895404 AGGCAACCTCTTCGTACTGTAA 59.105 45.455 0.00 0.00 37.17 2.41
4341 4505 1.000955 ACAGGCAACCTCTTCGTACTG 59.999 52.381 0.00 0.00 37.17 2.74
4342 4506 1.272769 GACAGGCAACCTCTTCGTACT 59.727 52.381 0.00 0.00 37.17 2.73
4344 4508 1.000506 GTGACAGGCAACCTCTTCGTA 59.999 52.381 0.00 0.00 37.17 3.43
4345 4509 0.249911 GTGACAGGCAACCTCTTCGT 60.250 55.000 0.00 0.00 37.17 3.85
4346 4510 0.249868 TGTGACAGGCAACCTCTTCG 60.250 55.000 0.00 0.00 37.17 3.79
4347 4511 2.191128 ATGTGACAGGCAACCTCTTC 57.809 50.000 0.00 0.00 37.17 2.87
4349 4513 1.421268 TGAATGTGACAGGCAACCTCT 59.579 47.619 0.00 0.00 37.17 3.69
4350 4514 1.537202 GTGAATGTGACAGGCAACCTC 59.463 52.381 0.00 0.00 37.17 3.85
4351 4515 1.133823 TGTGAATGTGACAGGCAACCT 60.134 47.619 0.00 0.00 37.17 3.50
4352 4516 1.317613 TGTGAATGTGACAGGCAACC 58.682 50.000 0.00 0.00 37.17 3.77
4353 4517 2.731217 GTTGTGAATGTGACAGGCAAC 58.269 47.619 0.00 0.38 0.00 4.17
4354 4518 1.333308 CGTTGTGAATGTGACAGGCAA 59.667 47.619 0.00 0.00 0.00 4.52
4355 4519 0.943673 CGTTGTGAATGTGACAGGCA 59.056 50.000 0.00 0.00 0.00 4.75
4356 4520 0.944386 ACGTTGTGAATGTGACAGGC 59.056 50.000 0.00 0.00 0.00 4.85
4357 4521 2.286950 CCAACGTTGTGAATGTGACAGG 60.287 50.000 25.63 2.86 0.00 4.00
4358 4522 2.286950 CCCAACGTTGTGAATGTGACAG 60.287 50.000 25.63 6.66 0.00 3.51
4359 4523 1.673400 CCCAACGTTGTGAATGTGACA 59.327 47.619 25.63 0.00 0.00 3.58
4360 4524 1.001815 CCCCAACGTTGTGAATGTGAC 60.002 52.381 25.63 0.00 0.00 3.67
4366 4530 1.848652 TTTTCCCCCAACGTTGTGAA 58.151 45.000 25.63 20.39 0.00 3.18
4377 4541 6.183360 TGTTTCTTACAAAGTCATTTTCCCCC 60.183 38.462 0.00 0.00 32.64 5.40
4385 4549 9.337396 TGTAACTGATGTTTCTTACAAAGTCAT 57.663 29.630 0.00 0.00 40.89 3.06
4386 4550 8.725405 TGTAACTGATGTTTCTTACAAAGTCA 57.275 30.769 0.00 0.00 40.89 3.41
4387 4551 7.798982 GCTGTAACTGATGTTTCTTACAAAGTC 59.201 37.037 0.00 0.00 40.89 3.01
4388 4552 7.499232 AGCTGTAACTGATGTTTCTTACAAAGT 59.501 33.333 0.00 0.00 40.89 2.66
4403 4865 6.993079 TCTGATTTTGTAGAGCTGTAACTGA 58.007 36.000 0.00 0.00 0.00 3.41
4412 4874 5.473504 TGGTTTCCTTCTGATTTTGTAGAGC 59.526 40.000 0.00 0.00 0.00 4.09
4413 4875 7.510549 TTGGTTTCCTTCTGATTTTGTAGAG 57.489 36.000 0.00 0.00 0.00 2.43
4426 4888 6.983890 TGTGCTTAAATCTTTTGGTTTCCTTC 59.016 34.615 0.00 0.00 0.00 3.46
4456 4918 7.052248 TGTGTAGGTAGTTCATCGAAGATAGA 58.948 38.462 0.00 0.00 45.12 1.98
4458 4920 7.634671 TTGTGTAGGTAGTTCATCGAAGATA 57.365 36.000 0.00 0.00 45.12 1.98
4464 4926 3.930848 GGGTTTGTGTAGGTAGTTCATCG 59.069 47.826 0.00 0.00 0.00 3.84
4473 4935 2.943036 ACGATTGGGTTTGTGTAGGT 57.057 45.000 0.00 0.00 0.00 3.08
4476 4938 6.108015 GGTATAGAACGATTGGGTTTGTGTA 58.892 40.000 0.00 0.00 0.00 2.90
4500 4962 7.428183 GCGTGGCATTATATATTTATGGTTTCG 59.572 37.037 0.00 0.00 0.00 3.46
4510 4972 7.138736 GTCTTTGTTGCGTGGCATTATATATT 58.861 34.615 0.00 0.00 38.76 1.28
4513 4975 4.397730 TGTCTTTGTTGCGTGGCATTATAT 59.602 37.500 0.00 0.00 38.76 0.86
4519 4981 1.265635 GTATGTCTTTGTTGCGTGGCA 59.734 47.619 0.00 0.00 36.47 4.92
4535 4998 6.218746 TGTGCTGCTAGAATAGACATGTATG 58.781 40.000 2.50 0.00 42.77 2.39
4548 5011 1.134877 GTGCTCTGATGTGCTGCTAGA 60.135 52.381 0.00 0.00 34.18 2.43
4566 5029 5.702670 AGTCATGTGGTACTGAAATCTTGTG 59.297 40.000 0.00 0.00 0.00 3.33
4587 5050 7.484035 ACTCTTGTTTGTAATGAGACAAGTC 57.516 36.000 12.96 0.00 45.58 3.01
4605 5070 1.163554 GAGCCCTGCAGAAACTCTTG 58.836 55.000 17.39 0.00 0.00 3.02
4608 5073 1.827969 TCTAGAGCCCTGCAGAAACTC 59.172 52.381 17.39 17.61 0.00 3.01
4609 5074 1.830477 CTCTAGAGCCCTGCAGAAACT 59.170 52.381 17.39 9.17 0.00 2.66
4620 5085 8.719645 ATATCATTATATGGGACTCTAGAGCC 57.280 38.462 19.97 19.59 0.00 4.70
4623 5088 8.801645 TGGGATATCATTATATGGGACTCTAGA 58.198 37.037 4.83 0.00 0.00 2.43
4624 5089 9.439461 TTGGGATATCATTATATGGGACTCTAG 57.561 37.037 4.83 0.00 0.00 2.43
4625 5090 9.797732 TTTGGGATATCATTATATGGGACTCTA 57.202 33.333 4.83 0.00 0.00 2.43
4626 5091 8.700145 TTTGGGATATCATTATATGGGACTCT 57.300 34.615 4.83 0.00 0.00 3.24
4627 5092 9.401058 CTTTTGGGATATCATTATATGGGACTC 57.599 37.037 4.83 0.00 0.00 3.36
4629 5094 9.753674 TTCTTTTGGGATATCATTATATGGGAC 57.246 33.333 4.83 0.00 0.00 4.46
4630 5095 9.979897 CTTCTTTTGGGATATCATTATATGGGA 57.020 33.333 4.83 0.00 0.00 4.37
4631 5096 9.979897 TCTTCTTTTGGGATATCATTATATGGG 57.020 33.333 4.83 0.00 0.00 4.00
4636 5101 9.713684 TTGGTTCTTCTTTTGGGATATCATTAT 57.286 29.630 4.83 0.00 0.00 1.28
4637 5102 8.966868 GTTGGTTCTTCTTTTGGGATATCATTA 58.033 33.333 4.83 0.00 0.00 1.90
4638 5103 7.675619 AGTTGGTTCTTCTTTTGGGATATCATT 59.324 33.333 4.83 0.00 0.00 2.57
4639 5104 7.123247 CAGTTGGTTCTTCTTTTGGGATATCAT 59.877 37.037 4.83 0.00 0.00 2.45
4640 5105 6.434028 CAGTTGGTTCTTCTTTTGGGATATCA 59.566 38.462 4.83 0.00 0.00 2.15
4641 5106 6.625960 GCAGTTGGTTCTTCTTTTGGGATATC 60.626 42.308 0.00 0.00 0.00 1.63
4642 5107 5.185828 GCAGTTGGTTCTTCTTTTGGGATAT 59.814 40.000 0.00 0.00 0.00 1.63
4643 5108 4.522789 GCAGTTGGTTCTTCTTTTGGGATA 59.477 41.667 0.00 0.00 0.00 2.59
4644 5109 3.321968 GCAGTTGGTTCTTCTTTTGGGAT 59.678 43.478 0.00 0.00 0.00 3.85
4645 5110 2.693074 GCAGTTGGTTCTTCTTTTGGGA 59.307 45.455 0.00 0.00 0.00 4.37
4646 5111 2.695147 AGCAGTTGGTTCTTCTTTTGGG 59.305 45.455 0.00 0.00 0.00 4.12
4647 5112 4.114794 CAAGCAGTTGGTTCTTCTTTTGG 58.885 43.478 0.00 0.00 32.86 3.28
4648 5113 4.747810 ACAAGCAGTTGGTTCTTCTTTTG 58.252 39.130 0.00 0.00 38.07 2.44
4649 5114 4.462483 TGACAAGCAGTTGGTTCTTCTTTT 59.538 37.500 0.00 0.00 38.07 2.27
4650 5115 4.016444 TGACAAGCAGTTGGTTCTTCTTT 58.984 39.130 0.00 0.00 38.07 2.52
4651 5116 3.620488 TGACAAGCAGTTGGTTCTTCTT 58.380 40.909 0.00 0.00 38.07 2.52
4652 5117 3.281727 TGACAAGCAGTTGGTTCTTCT 57.718 42.857 0.00 0.00 38.07 2.85
4653 5118 4.574599 AATGACAAGCAGTTGGTTCTTC 57.425 40.909 0.00 0.00 38.07 2.87
4654 5119 4.402155 TGAAATGACAAGCAGTTGGTTCTT 59.598 37.500 0.00 0.00 38.07 2.52
4655 5120 3.953612 TGAAATGACAAGCAGTTGGTTCT 59.046 39.130 0.00 0.00 38.07 3.01
4656 5121 4.044426 GTGAAATGACAAGCAGTTGGTTC 58.956 43.478 0.00 0.00 38.07 3.62
4657 5122 3.701040 AGTGAAATGACAAGCAGTTGGTT 59.299 39.130 0.00 0.00 38.07 3.67
4658 5123 3.290710 AGTGAAATGACAAGCAGTTGGT 58.709 40.909 0.00 0.00 38.07 3.67
4659 5124 3.996150 AGTGAAATGACAAGCAGTTGG 57.004 42.857 0.00 0.00 38.07 3.77
4660 5125 4.756642 TCCTAGTGAAATGACAAGCAGTTG 59.243 41.667 0.00 0.00 34.49 3.16
4661 5126 4.757149 GTCCTAGTGAAATGACAAGCAGTT 59.243 41.667 0.00 0.00 37.53 3.16
4662 5127 4.040952 AGTCCTAGTGAAATGACAAGCAGT 59.959 41.667 0.00 0.00 0.00 4.40
4663 5128 4.573900 AGTCCTAGTGAAATGACAAGCAG 58.426 43.478 0.00 0.00 0.00 4.24
4664 5129 4.623932 AGTCCTAGTGAAATGACAAGCA 57.376 40.909 0.00 0.00 0.00 3.91
4665 5130 5.725362 ACTAGTCCTAGTGAAATGACAAGC 58.275 41.667 6.19 0.00 44.11 4.01
4666 5131 6.091441 GCAACTAGTCCTAGTGAAATGACAAG 59.909 42.308 7.71 0.00 44.96 3.16
4667 5132 5.932303 GCAACTAGTCCTAGTGAAATGACAA 59.068 40.000 7.71 0.00 44.96 3.18
4679 5144 4.323485 CCAATCCAACTGCAACTAGTCCTA 60.323 45.833 0.00 0.00 0.00 2.94
4683 5148 2.108250 ACCCAATCCAACTGCAACTAGT 59.892 45.455 0.00 0.00 0.00 2.57
4688 5153 2.079170 TGAACCCAATCCAACTGCAA 57.921 45.000 0.00 0.00 0.00 4.08
4694 5159 3.561960 CCTGACTCATGAACCCAATCCAA 60.562 47.826 0.00 0.00 0.00 3.53
4698 5163 1.341383 GCCCTGACTCATGAACCCAAT 60.341 52.381 0.00 0.00 0.00 3.16
4709 5174 1.001641 AGCATGTTGGCCCTGACTC 60.002 57.895 0.00 0.00 0.00 3.36
4710 5175 1.303888 CAGCATGTTGGCCCTGACT 60.304 57.895 0.00 0.00 0.00 3.41
4732 5231 6.126594 CCTTATGGACAGTTTCCTGGGTTATA 60.127 42.308 0.00 0.00 46.10 0.98
4736 5235 2.308866 CCTTATGGACAGTTTCCTGGGT 59.691 50.000 0.00 0.00 46.10 4.51
4742 5241 3.751698 GGTGTCACCTTATGGACAGTTTC 59.248 47.826 15.22 0.00 44.05 2.78
4758 5257 0.107643 TGGAGAAATGTGCGGTGTCA 59.892 50.000 0.00 0.00 0.00 3.58
4759 5258 1.398390 GATGGAGAAATGTGCGGTGTC 59.602 52.381 0.00 0.00 0.00 3.67
4880 5379 6.021672 AGGCATAATACTGATCTCTGATCCA 58.978 40.000 5.27 0.00 0.00 3.41
4881 5380 6.543430 AGGCATAATACTGATCTCTGATCC 57.457 41.667 5.27 0.00 0.00 3.36
4889 5388 9.935241 TTGAGATTTCTAGGCATAATACTGATC 57.065 33.333 0.00 0.00 0.00 2.92
4911 5410 5.183713 TCTTGTTGGTTATCTTGCCATTGAG 59.816 40.000 0.00 0.00 34.37 3.02
4921 5420 6.990349 CCAATACCGTATCTTGTTGGTTATCT 59.010 38.462 0.00 0.00 35.93 1.98
4922 5421 6.293244 GCCAATACCGTATCTTGTTGGTTATC 60.293 42.308 8.84 0.00 38.61 1.75
4923 5422 5.529800 GCCAATACCGTATCTTGTTGGTTAT 59.470 40.000 8.84 0.00 38.61 1.89
4928 5427 2.933906 ACGCCAATACCGTATCTTGTTG 59.066 45.455 0.00 0.00 37.12 3.33
4934 5433 4.026310 CACTAACAACGCCAATACCGTATC 60.026 45.833 0.00 0.00 38.06 2.24
4935 5434 3.866910 CACTAACAACGCCAATACCGTAT 59.133 43.478 0.00 0.00 38.06 3.06
4938 5437 1.201987 GCACTAACAACGCCAATACCG 60.202 52.381 0.00 0.00 0.00 4.02
4939 5438 1.131693 GGCACTAACAACGCCAATACC 59.868 52.381 0.00 0.00 45.52 2.73
4947 5454 2.348666 GCTAGATGTGGCACTAACAACG 59.651 50.000 19.83 2.71 0.00 4.10
4949 5456 3.694043 TGCTAGATGTGGCACTAACAA 57.306 42.857 19.83 0.00 34.77 2.83
4967 5474 9.986833 AGTTTTGTTTGAATTATTGTCTTTTGC 57.013 25.926 0.00 0.00 0.00 3.68
4983 5490 5.757850 AGCTAGACCTTCAGTTTTGTTTG 57.242 39.130 0.00 0.00 0.00 2.93
5007 5514 8.306038 TGGATATTGATGTGAAGAAAAAGGTTG 58.694 33.333 0.00 0.00 0.00 3.77
5008 5515 8.421249 TGGATATTGATGTGAAGAAAAAGGTT 57.579 30.769 0.00 0.00 0.00 3.50
5040 5547 6.265196 TCCTGAAACAAACAGCAATAGTGAAT 59.735 34.615 0.00 0.00 34.47 2.57
5131 5638 1.073199 AGCGTTTGGTGAGAAGGGG 59.927 57.895 0.00 0.00 0.00 4.79
5158 5665 7.934665 TGTTTCACTAATTAGCCACTTAACAGA 59.065 33.333 12.54 0.00 0.00 3.41
5170 5677 9.244799 TGCGTATATCACTGTTTCACTAATTAG 57.755 33.333 11.05 11.05 0.00 1.73
5189 5696 4.633175 TGTTTCTGTGTTCCTTGCGTATA 58.367 39.130 0.00 0.00 0.00 1.47
5193 5700 1.597937 GCTGTTTCTGTGTTCCTTGCG 60.598 52.381 0.00 0.00 0.00 4.85
5195 5702 3.996150 ATGCTGTTTCTGTGTTCCTTG 57.004 42.857 0.00 0.00 0.00 3.61
5204 5711 5.705441 TGTAAGTCCCTTTATGCTGTTTCTG 59.295 40.000 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.