Multiple sequence alignment - TraesCS3A01G136500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G136500 chr3A 100.000 4590 0 0 999 5588 114041075 114045664 0.000000e+00 8477.0
1 TraesCS3A01G136500 chr3A 100.000 741 0 0 1 741 114040077 114040817 0.000000e+00 1369.0
2 TraesCS3A01G136500 chr3A 83.422 187 14 4 5395 5577 114045380 114045553 2.080000e-34 158.0
3 TraesCS3A01G136500 chr3A 83.422 187 14 4 5304 5477 114045471 114045653 2.080000e-34 158.0
4 TraesCS3A01G136500 chr3D 91.896 3961 219 55 1159 5070 95946268 95950175 0.000000e+00 5443.0
5 TraesCS3A01G136500 chr3D 87.591 411 25 6 5090 5478 95950242 95950648 2.370000e-123 453.0
6 TraesCS3A01G136500 chr3D 78.452 775 101 39 1 741 95944928 95945670 3.970000e-121 446.0
7 TraesCS3A01G136500 chr3D 89.302 215 14 5 5380 5588 95950444 95950655 1.540000e-65 261.0
8 TraesCS3A01G136500 chr3D 91.089 101 4 2 5283 5379 95950541 95950640 1.260000e-26 132.0
9 TraesCS3A01G136500 chr3D 87.273 110 7 4 5475 5577 95950434 95950543 9.830000e-23 119.0
10 TraesCS3A01G136500 chr3B 91.321 4021 245 54 1094 5070 146884350 146888310 0.000000e+00 5397.0
11 TraesCS3A01G136500 chr3B 78.934 769 96 41 1 741 146883187 146883917 3.940000e-126 462.0
12 TraesCS3A01G136500 chr3B 91.111 45 4 0 5434 5478 146888695 146888739 1.680000e-05 62.1
13 TraesCS3A01G136500 chr1B 79.698 463 82 10 1730 2189 191002864 191003317 1.940000e-84 324.0
14 TraesCS3A01G136500 chr1D 79.482 463 83 10 1730 2189 142151248 142150795 9.030000e-83 318.0
15 TraesCS3A01G136500 chr5D 78.226 124 27 0 2902 3025 545212529 545212406 4.640000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G136500 chr3A 114040077 114045664 5587 False 2540.500000 8477 91.7110 1 5588 4 chr3A.!!$F1 5587
1 TraesCS3A01G136500 chr3D 95944928 95950655 5727 False 1142.333333 5443 87.6005 1 5588 6 chr3D.!!$F1 5587
2 TraesCS3A01G136500 chr3B 146883187 146888739 5552 False 1973.700000 5397 87.1220 1 5478 3 chr3B.!!$F1 5477

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
589 635 0.175073 ACCTTCCGCTAGCTTAACCG 59.825 55.0 13.93 0.00 0.00 4.44 F
594 640 0.179108 CCGCTAGCTTAACCGCTTCT 60.179 55.0 13.93 0.00 41.30 2.85 F
1362 1790 0.248784 GAATCAGCTGATTTGCGGGC 60.249 55.0 35.91 21.63 44.14 6.13 F
1889 2318 0.251297 CCACCACAAGCAGGGATGAA 60.251 55.0 0.00 0.00 0.00 2.57 F
2783 3223 0.537188 AGCCTGACCTTGGTCGTATG 59.463 55.0 14.24 4.76 0.00 2.39 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1404 1832 0.109597 CTCTGCCGCACACCAAAATC 60.110 55.000 0.0 0.0 0.00 2.17 R
1594 2023 0.179161 CAGTTCCTACCACTCGCTCG 60.179 60.000 0.0 0.0 0.00 5.03 R
2487 2917 1.402259 AGGACATACTCGCAAGACTCG 59.598 52.381 0.0 0.0 45.01 4.18 R
3657 4110 0.405585 ACCCAGCCACTTAGCACAAT 59.594 50.000 0.0 0.0 34.23 2.71 R
4742 5216 0.097325 GGCAACAACAACAACGACGA 59.903 50.000 0.0 0.0 0.00 4.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.722487 GCCGATCGTCGTCCATCT 59.278 61.111 15.09 0.00 38.40 2.90
33 34 1.370657 GCCGATCGTCGTCCATCTC 60.371 63.158 15.09 0.00 38.40 2.75
43 44 1.000843 TCGTCCATCTCATTATGGCCG 59.999 52.381 0.00 0.16 46.88 6.13
59 60 1.548719 GGCCGAAAATTAAACCCTGCT 59.451 47.619 0.00 0.00 0.00 4.24
77 78 3.742786 TGCTAGCAAACGAAATTAAGCG 58.257 40.909 16.84 0.00 0.00 4.68
91 92 2.890808 TAAGCGCTGCTAGCAATACT 57.109 45.000 19.86 12.64 42.58 2.12
101 102 5.690409 GCTGCTAGCAATACTAACGTGATTA 59.310 40.000 19.86 0.00 41.89 1.75
112 113 2.493713 ACGTGATTATCGCTGGAGTC 57.506 50.000 4.20 0.00 0.00 3.36
114 115 1.132588 GTGATTATCGCTGGAGTCGC 58.867 55.000 0.00 0.00 0.00 5.19
122 124 4.056125 CTGGAGTCGCTGGCACGA 62.056 66.667 7.84 7.84 40.36 4.35
139 141 4.033587 GGCACGACTTATCTGCGAATAAAA 59.966 41.667 0.00 0.00 32.76 1.52
141 143 5.672856 GCACGACTTATCTGCGAATAAAAAG 59.327 40.000 0.00 0.00 0.00 2.27
142 144 6.455113 GCACGACTTATCTGCGAATAAAAAGA 60.455 38.462 0.00 0.00 0.00 2.52
143 145 7.621991 CACGACTTATCTGCGAATAAAAAGAT 58.378 34.615 0.00 0.00 33.96 2.40
144 146 8.116753 CACGACTTATCTGCGAATAAAAAGATT 58.883 33.333 0.00 0.00 31.90 2.40
145 147 9.309516 ACGACTTATCTGCGAATAAAAAGATTA 57.690 29.630 0.00 0.00 31.90 1.75
215 221 6.445357 ACTAAACATTTTCTTGACGGTGTT 57.555 33.333 0.00 0.00 0.00 3.32
223 229 8.626526 ACATTTTCTTGACGGTGTTAACTAAAT 58.373 29.630 7.22 0.00 0.00 1.40
226 232 7.556733 TTCTTGACGGTGTTAACTAAATGTT 57.443 32.000 7.22 0.00 42.31 2.71
228 234 5.098218 TGACGGTGTTAACTAAATGTTGC 57.902 39.130 7.22 0.00 39.55 4.17
229 235 4.023878 TGACGGTGTTAACTAAATGTTGCC 60.024 41.667 7.22 0.00 39.55 4.52
231 237 3.239254 GGTGTTAACTAAATGTTGCCGC 58.761 45.455 7.22 0.00 39.55 6.53
234 240 5.321516 GTGTTAACTAAATGTTGCCGCTAG 58.678 41.667 7.22 0.00 39.55 3.42
235 241 4.142773 TGTTAACTAAATGTTGCCGCTAGC 60.143 41.667 4.06 4.06 39.55 3.42
248 254 2.268298 CCGCTAGCACTAATTCAACGT 58.732 47.619 16.45 0.00 0.00 3.99
249 255 2.281762 CCGCTAGCACTAATTCAACGTC 59.718 50.000 16.45 0.00 0.00 4.34
250 256 2.281762 CGCTAGCACTAATTCAACGTCC 59.718 50.000 16.45 0.00 0.00 4.79
251 257 2.281762 GCTAGCACTAATTCAACGTCCG 59.718 50.000 10.63 0.00 0.00 4.79
255 261 2.159747 GCACTAATTCAACGTCCGTTCC 60.160 50.000 1.44 0.00 36.00 3.62
257 263 3.495377 CACTAATTCAACGTCCGTTCCAA 59.505 43.478 1.44 0.00 36.00 3.53
258 264 3.495753 ACTAATTCAACGTCCGTTCCAAC 59.504 43.478 1.44 0.00 36.00 3.77
275 281 7.964545 GTTCCAACGAAGCGATAAAATAAAT 57.035 32.000 0.00 0.00 0.00 1.40
279 285 9.493206 TCCAACGAAGCGATAAAATAAATAAAC 57.507 29.630 0.00 0.00 0.00 2.01
287 293 9.758651 AGCGATAAAATAAATAAACATTTCCCC 57.241 29.630 0.00 0.00 0.00 4.81
288 294 9.535878 GCGATAAAATAAATAAACATTTCCCCA 57.464 29.630 0.00 0.00 0.00 4.96
299 305 9.500785 AATAAACATTTCCCCACAAAACATAAG 57.499 29.630 0.00 0.00 0.00 1.73
301 307 4.592778 ACATTTCCCCACAAAACATAAGCT 59.407 37.500 0.00 0.00 0.00 3.74
307 313 3.568538 CCACAAAACATAAGCTGCAGTC 58.431 45.455 16.64 7.83 0.00 3.51
312 318 4.916983 AAACATAAGCTGCAGTCAAACA 57.083 36.364 16.64 0.00 0.00 2.83
318 324 0.867746 GCTGCAGTCAAACATCGACA 59.132 50.000 16.64 0.00 35.77 4.35
321 327 3.125146 GCTGCAGTCAAACATCGACAATA 59.875 43.478 16.64 0.00 35.77 1.90
322 328 4.378356 GCTGCAGTCAAACATCGACAATAA 60.378 41.667 16.64 0.00 35.77 1.40
323 329 5.029650 TGCAGTCAAACATCGACAATAAC 57.970 39.130 0.00 0.00 35.77 1.89
324 330 4.513318 TGCAGTCAAACATCGACAATAACA 59.487 37.500 0.00 0.00 35.77 2.41
325 331 5.008118 TGCAGTCAAACATCGACAATAACAA 59.992 36.000 0.00 0.00 35.77 2.83
328 334 5.464057 AGTCAAACATCGACAATAACAACGA 59.536 36.000 0.00 0.00 39.01 3.85
331 337 3.567530 ACATCGACAATAACAACGACGA 58.432 40.909 0.00 0.00 37.58 4.20
332 338 3.606777 ACATCGACAATAACAACGACGAG 59.393 43.478 0.00 0.00 37.58 4.18
333 339 2.587956 TCGACAATAACAACGACGAGG 58.412 47.619 0.00 0.00 0.00 4.63
334 340 1.058695 CGACAATAACAACGACGAGGC 59.941 52.381 0.00 0.00 0.00 4.70
335 341 1.392510 GACAATAACAACGACGAGGCC 59.607 52.381 0.00 0.00 0.00 5.19
336 342 0.368907 CAATAACAACGACGAGGCCG 59.631 55.000 0.00 0.00 42.50 6.13
337 343 1.356527 AATAACAACGACGAGGCCGC 61.357 55.000 0.00 0.00 39.95 6.53
338 344 2.495366 ATAACAACGACGAGGCCGCA 62.495 55.000 7.44 0.00 39.95 5.69
351 357 1.226945 GCCGCACTGCTTTGTTTGT 60.227 52.632 0.00 0.00 0.00 2.83
352 358 1.481819 GCCGCACTGCTTTGTTTGTG 61.482 55.000 0.00 0.00 0.00 3.33
354 360 2.300533 GCACTGCTTTGTTTGTGCC 58.699 52.632 5.75 0.00 46.84 5.01
355 361 0.179103 GCACTGCTTTGTTTGTGCCT 60.179 50.000 5.75 0.00 46.84 4.75
364 370 0.878523 TGTTTGTGCCTTCTCGTCGG 60.879 55.000 0.00 0.00 0.00 4.79
366 372 2.377628 TTTGTGCCTTCTCGTCGGCT 62.378 55.000 0.00 0.00 46.42 5.52
368 374 1.214589 GTGCCTTCTCGTCGGCTTA 59.785 57.895 0.00 0.00 46.42 3.09
373 379 1.404315 CCTTCTCGTCGGCTTAAGCTT 60.404 52.381 25.88 3.48 41.70 3.74
379 385 2.094182 TCGTCGGCTTAAGCTTGAAGAT 60.094 45.455 25.88 0.00 41.70 2.40
383 389 3.118261 TCGGCTTAAGCTTGAAGATGGAT 60.118 43.478 25.88 0.00 41.70 3.41
384 390 4.100963 TCGGCTTAAGCTTGAAGATGGATA 59.899 41.667 25.88 0.00 41.70 2.59
388 394 6.488006 GGCTTAAGCTTGAAGATGGATATGAA 59.512 38.462 25.88 0.00 41.70 2.57
389 395 7.176340 GGCTTAAGCTTGAAGATGGATATGAAT 59.824 37.037 25.88 0.00 41.70 2.57
390 396 8.574737 GCTTAAGCTTGAAGATGGATATGAATT 58.425 33.333 20.38 0.00 38.21 2.17
395 401 9.803507 AGCTTGAAGATGGATATGAATTTATCA 57.196 29.630 0.00 0.00 43.67 2.15
480 516 6.894339 ATATAAATTTCCCGCGAAAATCCT 57.106 33.333 8.23 7.11 41.25 3.24
482 518 0.455815 ATTTCCCGCGAAAATCCTGC 59.544 50.000 8.23 0.00 41.25 4.85
486 522 1.021202 CCCGCGAAAATCCTGCATAA 58.979 50.000 8.23 0.00 0.00 1.90
520 565 1.823470 GCTGGCGGTAATGCATGGA 60.823 57.895 0.00 0.00 36.28 3.41
521 566 1.789078 GCTGGCGGTAATGCATGGAG 61.789 60.000 0.00 0.00 36.28 3.86
584 630 0.391793 GCTTGACCTTCCGCTAGCTT 60.392 55.000 13.93 0.00 31.66 3.74
586 632 2.677037 GCTTGACCTTCCGCTAGCTTAA 60.677 50.000 13.93 5.82 31.66 1.85
588 634 1.206371 TGACCTTCCGCTAGCTTAACC 59.794 52.381 13.93 0.00 0.00 2.85
589 635 0.175073 ACCTTCCGCTAGCTTAACCG 59.825 55.000 13.93 0.00 0.00 4.44
590 636 1.152383 CCTTCCGCTAGCTTAACCGC 61.152 60.000 13.93 0.00 0.00 5.68
592 638 0.248289 TTCCGCTAGCTTAACCGCTT 59.752 50.000 13.93 0.00 41.30 4.68
593 639 0.179119 TCCGCTAGCTTAACCGCTTC 60.179 55.000 13.93 0.00 41.30 3.86
594 640 0.179108 CCGCTAGCTTAACCGCTTCT 60.179 55.000 13.93 0.00 41.30 2.85
729 780 2.124320 ATCCCAATCCCCAACGCG 60.124 61.111 3.53 3.53 0.00 6.01
1021 1072 4.687215 TCCGTGCTCTGGTGCTGC 62.687 66.667 0.00 0.00 0.00 5.25
1023 1074 3.420606 CGTGCTCTGGTGCTGCAG 61.421 66.667 10.11 10.11 37.39 4.41
1027 1078 4.383861 CTCTGGTGCTGCAGGCGA 62.384 66.667 17.12 0.00 45.43 5.54
1028 1079 4.383861 TCTGGTGCTGCAGGCGAG 62.384 66.667 17.12 0.00 45.43 5.03
1059 1110 4.699522 GACCCTGTCACCGGCCAC 62.700 72.222 0.00 0.00 32.09 5.01
1061 1112 4.033776 CCCTGTCACCGGCCACAT 62.034 66.667 0.00 0.00 0.00 3.21
1062 1113 2.436646 CCTGTCACCGGCCACATC 60.437 66.667 0.00 0.00 0.00 3.06
1063 1114 2.347114 CTGTCACCGGCCACATCA 59.653 61.111 0.00 0.00 0.00 3.07
1064 1115 1.078214 CTGTCACCGGCCACATCAT 60.078 57.895 0.00 0.00 0.00 2.45
1065 1116 1.078497 TGTCACCGGCCACATCATC 60.078 57.895 0.00 0.00 0.00 2.92
1066 1117 1.221840 GTCACCGGCCACATCATCT 59.778 57.895 0.00 0.00 0.00 2.90
1067 1118 0.811616 GTCACCGGCCACATCATCTC 60.812 60.000 0.00 0.00 0.00 2.75
1068 1119 1.524621 CACCGGCCACATCATCTCC 60.525 63.158 0.00 0.00 0.00 3.71
1069 1120 1.995066 ACCGGCCACATCATCTCCA 60.995 57.895 0.00 0.00 0.00 3.86
1070 1121 1.524621 CCGGCCACATCATCTCCAC 60.525 63.158 2.24 0.00 0.00 4.02
1071 1122 1.524621 CGGCCACATCATCTCCACC 60.525 63.158 2.24 0.00 0.00 4.61
1072 1123 1.609239 GGCCACATCATCTCCACCA 59.391 57.895 0.00 0.00 0.00 4.17
1073 1124 0.749454 GGCCACATCATCTCCACCAC 60.749 60.000 0.00 0.00 0.00 4.16
1074 1125 0.749454 GCCACATCATCTCCACCACC 60.749 60.000 0.00 0.00 0.00 4.61
1075 1126 0.620030 CCACATCATCTCCACCACCA 59.380 55.000 0.00 0.00 0.00 4.17
1076 1127 1.213678 CCACATCATCTCCACCACCAT 59.786 52.381 0.00 0.00 0.00 3.55
1077 1128 2.569059 CACATCATCTCCACCACCATC 58.431 52.381 0.00 0.00 0.00 3.51
1078 1129 1.139654 ACATCATCTCCACCACCATCG 59.860 52.381 0.00 0.00 0.00 3.84
1079 1130 0.761187 ATCATCTCCACCACCATCGG 59.239 55.000 0.00 0.00 0.00 4.18
1080 1131 1.524621 CATCTCCACCACCATCGGC 60.525 63.158 0.00 0.00 0.00 5.54
1081 1132 3.094062 ATCTCCACCACCATCGGCG 62.094 63.158 0.00 0.00 0.00 6.46
1082 1133 4.838152 CTCCACCACCATCGGCGG 62.838 72.222 7.21 0.00 0.00 6.13
1085 1136 4.402528 CACCACCATCGGCGGGAA 62.403 66.667 7.21 0.00 0.00 3.97
1086 1137 4.096003 ACCACCATCGGCGGGAAG 62.096 66.667 7.21 0.97 0.00 3.46
1143 1559 7.237173 GTGTTCTCGATTTTATGTTCCTCTTG 58.763 38.462 0.00 0.00 0.00 3.02
1148 1564 4.330074 CGATTTTATGTTCCTCTTGCTCGT 59.670 41.667 0.00 0.00 0.00 4.18
1193 1609 1.004440 GCCTGCTCTTCTCACGGTT 60.004 57.895 0.00 0.00 0.00 4.44
1197 1613 2.213499 CTGCTCTTCTCACGGTTGTTT 58.787 47.619 0.00 0.00 0.00 2.83
1198 1614 2.210116 TGCTCTTCTCACGGTTGTTTC 58.790 47.619 0.00 0.00 0.00 2.78
1214 1630 1.338020 GTTTCCCTTCCTGTGCTGTTG 59.662 52.381 0.00 0.00 0.00 3.33
1222 1638 3.185082 CTGTGCTGTTGGTGCCGTG 62.185 63.158 0.00 0.00 0.00 4.94
1249 1665 1.202486 CGCTCCGCTAAGGGATTTGTA 60.202 52.381 0.00 0.00 41.52 2.41
1251 1667 2.484889 CTCCGCTAAGGGATTTGTAGC 58.515 52.381 0.00 0.00 41.52 3.58
1277 1699 7.121315 CCTCTAGCAAATGTTTAGCTTTAACCT 59.879 37.037 0.00 0.00 39.68 3.50
1318 1745 3.182996 GGGTGGGGTGGTCTGGTT 61.183 66.667 0.00 0.00 0.00 3.67
1328 1755 0.669318 TGGTCTGGTTGCGATTCGTC 60.669 55.000 8.03 0.94 0.00 4.20
1339 1766 1.594862 GCGATTCGTCCAGGAAATCAG 59.405 52.381 12.55 7.56 0.00 2.90
1345 1772 1.808411 GTCCAGGAAATCAGTGCGAA 58.192 50.000 0.00 0.00 0.00 4.70
1346 1773 2.359900 GTCCAGGAAATCAGTGCGAAT 58.640 47.619 0.00 0.00 0.00 3.34
1362 1790 0.248784 GAATCAGCTGATTTGCGGGC 60.249 55.000 35.91 21.63 44.14 6.13
1376 1804 1.949257 CGGGCTTTGTTGACCAGAC 59.051 57.895 0.00 0.00 33.86 3.51
1381 1809 2.288666 GCTTTGTTGACCAGACACAGA 58.711 47.619 0.00 0.00 28.63 3.41
1383 1811 1.953559 TTGTTGACCAGACACAGAGC 58.046 50.000 0.00 0.00 0.00 4.09
1389 1817 2.147150 GACCAGACACAGAGCCTTTTC 58.853 52.381 0.00 0.00 0.00 2.29
1391 1819 1.072965 CCAGACACAGAGCCTTTTCCT 59.927 52.381 0.00 0.00 0.00 3.36
1393 1821 2.810852 CAGACACAGAGCCTTTTCCTTC 59.189 50.000 0.00 0.00 0.00 3.46
1394 1822 2.439507 AGACACAGAGCCTTTTCCTTCA 59.560 45.455 0.00 0.00 0.00 3.02
1395 1823 3.073650 AGACACAGAGCCTTTTCCTTCAT 59.926 43.478 0.00 0.00 0.00 2.57
1399 1827 3.829026 ACAGAGCCTTTTCCTTCATTTCC 59.171 43.478 0.00 0.00 0.00 3.13
1401 1829 4.281688 CAGAGCCTTTTCCTTCATTTCCAA 59.718 41.667 0.00 0.00 0.00 3.53
1403 1831 3.324846 AGCCTTTTCCTTCATTTCCAACC 59.675 43.478 0.00 0.00 0.00 3.77
1404 1832 3.860754 GCCTTTTCCTTCATTTCCAACCG 60.861 47.826 0.00 0.00 0.00 4.44
1405 1833 3.572255 CCTTTTCCTTCATTTCCAACCGA 59.428 43.478 0.00 0.00 0.00 4.69
1406 1834 4.220602 CCTTTTCCTTCATTTCCAACCGAT 59.779 41.667 0.00 0.00 0.00 4.18
1436 1864 2.292267 CGGCAGAGAAATTATGTGGCT 58.708 47.619 9.38 0.00 0.00 4.75
1481 1909 0.315059 CGTGTTATGGCTAAAGCGCG 60.315 55.000 0.00 0.00 43.26 6.86
1485 1913 2.199236 GTTATGGCTAAAGCGCGTACT 58.801 47.619 8.43 0.00 43.26 2.73
1502 1931 5.493735 GCGTACTGAAATCATGTTCTAAGC 58.506 41.667 0.00 0.00 0.00 3.09
1507 1936 5.874810 ACTGAAATCATGTTCTAAGCGCTAA 59.125 36.000 12.05 0.00 0.00 3.09
1511 1940 4.536364 TCATGTTCTAAGCGCTAATTGC 57.464 40.909 12.05 1.88 38.57 3.56
1523 1952 2.730090 CGCTAATTGCTTTGTGCTCAGG 60.730 50.000 0.00 0.00 43.37 3.86
1528 1957 1.024271 TGCTTTGTGCTCAGGTTGTC 58.976 50.000 0.00 0.00 43.37 3.18
1594 2023 2.291741 GCAGACAATTAGCTACATGGCC 59.708 50.000 7.10 0.00 0.00 5.36
1600 2029 1.388837 TTAGCTACATGGCCGAGCGA 61.389 55.000 11.68 5.53 41.23 4.93
1642 2071 1.134491 GGGATTGTCTTCCAGGTACGG 60.134 57.143 0.00 0.00 37.53 4.02
1643 2072 1.653151 GATTGTCTTCCAGGTACGGC 58.347 55.000 0.00 0.00 0.00 5.68
1649 2078 2.253403 CTTCCAGGTACGGCCCCTTC 62.253 65.000 0.00 0.00 38.26 3.46
1654 2083 2.653087 GGTACGGCCCCTTCGTCTT 61.653 63.158 0.00 0.00 41.38 3.01
1655 2084 1.322538 GGTACGGCCCCTTCGTCTTA 61.323 60.000 0.00 0.00 41.38 2.10
1666 2095 3.127030 CCCTTCGTCTTATGGTTTGCTTC 59.873 47.826 0.00 0.00 0.00 3.86
1678 2107 3.636300 TGGTTTGCTTCTGCTTTATGTGT 59.364 39.130 0.00 0.00 40.48 3.72
1679 2108 4.099266 TGGTTTGCTTCTGCTTTATGTGTT 59.901 37.500 0.00 0.00 40.48 3.32
1698 2127 5.068329 TGTGTTGTTGCCAATTAGTTGATGA 59.932 36.000 0.00 0.00 37.53 2.92
1784 2213 1.250328 CCATCAAGAAGGTGCTGCAA 58.750 50.000 2.77 0.00 0.00 4.08
1787 2216 1.597742 TCAAGAAGGTGCTGCAAGAC 58.402 50.000 2.77 0.00 34.07 3.01
1844 2273 1.645391 TCCATGGACCATCCCAATGTT 59.355 47.619 11.44 0.00 40.04 2.71
1889 2318 0.251297 CCACCACAAGCAGGGATGAA 60.251 55.000 0.00 0.00 0.00 2.57
1892 2321 1.271597 ACCACAAGCAGGGATGAACTC 60.272 52.381 0.00 0.00 0.00 3.01
1994 2423 2.734079 GCCGCTTATCTATGTCAAGCTC 59.266 50.000 4.27 0.00 41.97 4.09
2010 2439 5.068460 GTCAAGCTCTACATGTATCAGGTCT 59.932 44.000 5.91 0.00 29.18 3.85
2019 2448 3.678056 TGTATCAGGTCTGTGAACCAC 57.322 47.619 0.00 0.00 42.12 4.16
2026 2455 4.780554 TCAGGTCTGTGAACCACCATATTA 59.219 41.667 0.00 0.00 42.12 0.98
2032 2461 6.430000 GTCTGTGAACCACCATATTACACTTT 59.570 38.462 0.00 0.00 32.73 2.66
2043 2472 2.058125 TTACACTTTCCTGGCCGCCA 62.058 55.000 12.67 12.67 0.00 5.69
2049 2478 0.968393 TTTCCTGGCCGCCAATAACC 60.968 55.000 14.45 0.00 30.80 2.85
2055 2484 2.706834 GCCGCCAATAACCGCCTTT 61.707 57.895 0.00 0.00 0.00 3.11
2058 2487 1.345410 CGCCAATAACCGCCTTTTTG 58.655 50.000 0.00 0.00 0.00 2.44
2073 2502 5.039333 GCCTTTTTGCTCTGCTAATGTATG 58.961 41.667 0.00 0.00 0.00 2.39
2075 2504 6.183360 GCCTTTTTGCTCTGCTAATGTATGTA 60.183 38.462 0.00 0.00 0.00 2.29
2077 2506 8.072567 CCTTTTTGCTCTGCTAATGTATGTATC 58.927 37.037 0.00 0.00 0.00 2.24
2078 2507 8.504812 TTTTTGCTCTGCTAATGTATGTATCA 57.495 30.769 0.00 0.00 0.00 2.15
2079 2508 8.681486 TTTTGCTCTGCTAATGTATGTATCAT 57.319 30.769 0.00 0.00 0.00 2.45
2082 2511 7.095270 TGCTCTGCTAATGTATGTATCATCTG 58.905 38.462 0.00 0.00 0.00 2.90
2083 2512 6.035866 GCTCTGCTAATGTATGTATCATCTGC 59.964 42.308 0.00 0.00 0.00 4.26
2107 2536 3.295973 TGTTTGCAGCTTTTTAGAGGGT 58.704 40.909 0.00 0.00 0.00 4.34
2121 2550 7.916914 TTTTAGAGGGTTAGCTTATGTTCAC 57.083 36.000 0.00 0.00 0.00 3.18
2173 2602 6.369065 TGTGAAACCACAAAATGTTTTGGTAC 59.631 34.615 19.08 3.09 45.24 3.34
2179 2608 6.349944 ACCACAAAATGTTTTGGTACGTGTTA 60.350 34.615 19.08 0.00 44.36 2.41
2211 2640 6.170512 CGATCTCGTTACTTGTACGATTTC 57.829 41.667 0.00 0.00 45.76 2.17
2215 2644 9.229784 GATCTCGTTACTTGTACGATTTCATAA 57.770 33.333 0.00 0.00 45.76 1.90
2296 2725 4.067896 TCAAGATCTGTGACTTTGGAAGC 58.932 43.478 0.00 0.00 0.00 3.86
2312 2741 2.488153 GGAAGCGCAAAAGTTCTGGTAT 59.512 45.455 11.47 0.00 0.00 2.73
2344 2773 7.817910 TCCCCCTTAAGAATCAGTAGTTTAA 57.182 36.000 3.36 0.00 0.00 1.52
2372 2801 7.763528 TCAGTGTTGCATTTAGTTTTGAATTGT 59.236 29.630 0.00 0.00 0.00 2.71
2487 2917 4.750098 CCCCATGATAACGTGTAAGATGTC 59.250 45.833 0.00 0.00 0.00 3.06
2504 2934 1.810755 TGTCGAGTCTTGCGAGTATGT 59.189 47.619 0.00 0.00 38.59 2.29
2511 2941 2.164624 GTCTTGCGAGTATGTCCTGAGT 59.835 50.000 0.00 0.00 0.00 3.41
2521 2951 6.454318 CGAGTATGTCCTGAGTTTTGAAATCG 60.454 42.308 0.00 0.00 0.00 3.34
2555 2985 8.644374 AGTTGGCTTTAATACAATAGTGGAAA 57.356 30.769 0.00 0.00 0.00 3.13
2556 2986 8.739972 AGTTGGCTTTAATACAATAGTGGAAAG 58.260 33.333 0.00 0.64 0.00 2.62
2558 2988 7.406916 TGGCTTTAATACAATAGTGGAAAGGA 58.593 34.615 0.00 0.00 0.00 3.36
2559 2989 7.338449 TGGCTTTAATACAATAGTGGAAAGGAC 59.662 37.037 0.00 0.00 0.00 3.85
2560 2990 7.338449 GGCTTTAATACAATAGTGGAAAGGACA 59.662 37.037 0.00 0.00 0.00 4.02
2588 3027 4.843728 TCCCATACTTGACAGTCCATTTC 58.156 43.478 0.00 0.00 34.06 2.17
2623 3062 5.221106 CCATTGTATAATTGGTGTCTGGCTG 60.221 44.000 0.00 0.00 0.00 4.85
2631 3070 1.344438 TGGTGTCTGGCTGTCTACTTG 59.656 52.381 0.00 0.00 0.00 3.16
2632 3071 1.338200 GGTGTCTGGCTGTCTACTTGG 60.338 57.143 0.00 0.00 0.00 3.61
2634 3073 2.234908 GTGTCTGGCTGTCTACTTGGAT 59.765 50.000 0.00 0.00 0.00 3.41
2667 3106 4.519540 AATTGGGTTCATTACACACTGC 57.480 40.909 0.00 0.00 40.71 4.40
2683 3122 3.703556 ACACTGCTATCTGTATGCTGTCT 59.296 43.478 0.00 0.00 36.90 3.41
2701 3140 5.537188 CTGTCTGCTCTATTCATTACTCCC 58.463 45.833 0.00 0.00 0.00 4.30
2724 3163 4.278956 CCCTGTAGGCGACACAAC 57.721 61.111 0.00 0.00 33.31 3.32
2725 3164 1.369692 CCCTGTAGGCGACACAACA 59.630 57.895 0.00 0.00 33.31 3.33
2737 3176 4.088648 GCGACACAACATACATAAACTGC 58.911 43.478 0.00 0.00 0.00 4.40
2778 3218 1.222113 GCCTAGCCTGACCTTGGTC 59.778 63.158 12.54 12.54 31.50 4.02
2782 3222 2.032620 CTAGCCTGACCTTGGTCGTAT 58.967 52.381 14.24 4.14 0.00 3.06
2783 3223 0.537188 AGCCTGACCTTGGTCGTATG 59.463 55.000 14.24 4.76 0.00 2.39
2792 3232 3.252458 ACCTTGGTCGTATGAAAACTTGC 59.748 43.478 0.00 0.00 0.00 4.01
2796 3236 4.323417 TGGTCGTATGAAAACTTGCATCT 58.677 39.130 0.00 0.00 0.00 2.90
2824 3264 7.954788 TTTTTCCTCAATTTGGTTATTTCCG 57.045 32.000 0.00 0.00 0.00 4.30
2826 3266 4.340617 TCCTCAATTTGGTTATTTCCGCT 58.659 39.130 0.00 0.00 0.00 5.52
2831 3271 5.710099 TCAATTTGGTTATTTCCGCTCTCTT 59.290 36.000 0.00 0.00 0.00 2.85
2832 3272 5.819825 ATTTGGTTATTTCCGCTCTCTTC 57.180 39.130 0.00 0.00 0.00 2.87
2835 3275 3.260884 TGGTTATTTCCGCTCTCTTCAGT 59.739 43.478 0.00 0.00 0.00 3.41
2839 3279 3.753294 TTTCCGCTCTCTTCAGTTCTT 57.247 42.857 0.00 0.00 0.00 2.52
2843 3283 2.231478 CCGCTCTCTTCAGTTCTTACCA 59.769 50.000 0.00 0.00 0.00 3.25
2906 3346 6.609876 TGGTGAACCCAATATAGCATACATT 58.390 36.000 0.00 0.00 41.50 2.71
2963 3403 5.637006 TTGGTGCAACTGAATATACAACC 57.363 39.130 2.04 0.00 36.74 3.77
3003 3443 2.775890 CTGGATGTGTTCTTGCAGAGT 58.224 47.619 0.00 0.00 38.67 3.24
3021 3461 4.752101 CAGAGTTACTTCTTGGTCAGGTTG 59.248 45.833 0.00 0.00 0.00 3.77
3111 3559 4.908601 TTCTGATCACCCTATGTGTTGT 57.091 40.909 0.00 0.00 45.61 3.32
3162 3610 1.276421 ACTGCGGTTGATCAGCTAGTT 59.724 47.619 9.57 0.00 38.06 2.24
3196 3644 4.513442 GGTACTGCCTGATGTTTCACATA 58.487 43.478 0.00 0.00 39.27 2.29
3213 3661 7.566760 TTCACATACAACATTGTCTTCTTGT 57.433 32.000 0.00 0.00 42.35 3.16
3214 3662 8.669946 TTCACATACAACATTGTCTTCTTGTA 57.330 30.769 0.00 1.84 42.35 2.41
3335 3784 3.447586 CCGAGTTCAGGTTTCCTCAGATA 59.552 47.826 0.00 0.00 0.00 1.98
3377 3826 8.553696 CACAAGGTAGACATACGTTAAGTTTTT 58.446 33.333 0.00 0.00 37.78 1.94
3500 3953 8.789825 AATTATGAATTAAAAATGTGCCTGCA 57.210 26.923 0.00 0.00 0.00 4.41
3634 4087 2.289547 TGCTGTAAGTTTTTCCGTGCTC 59.710 45.455 0.00 0.00 35.30 4.26
3657 4110 4.083324 CGGCTTTGTGATTGCTCTTAAAGA 60.083 41.667 0.00 0.00 31.99 2.52
3729 4183 7.120789 GGTCATTTTACCTCTTGCATTTTTG 57.879 36.000 0.00 0.00 36.53 2.44
3762 4218 9.027202 TGTGATACTAGTACATGGTTTTGTCTA 57.973 33.333 4.31 0.00 0.00 2.59
3884 4343 1.242076 CTCTTCTGCACCTTTGTGGG 58.758 55.000 0.00 0.00 42.99 4.61
3888 4347 0.550914 TCTGCACCTTTGTGGGAGTT 59.449 50.000 0.00 0.00 42.99 3.01
3889 4348 1.064017 TCTGCACCTTTGTGGGAGTTT 60.064 47.619 0.00 0.00 42.99 2.66
3890 4349 1.756538 CTGCACCTTTGTGGGAGTTTT 59.243 47.619 0.00 0.00 42.99 2.43
3891 4350 2.168313 CTGCACCTTTGTGGGAGTTTTT 59.832 45.455 0.00 0.00 42.99 1.94
3994 4458 5.724370 TGATATCCTGTGGTCCAGAACTAAA 59.276 40.000 0.00 0.00 44.49 1.85
4016 4480 6.738832 AATGTTGATGAGTCTTGACTGATG 57.261 37.500 8.11 0.00 0.00 3.07
4017 4481 5.473066 TGTTGATGAGTCTTGACTGATGA 57.527 39.130 8.11 0.00 0.00 2.92
4018 4482 5.476614 TGTTGATGAGTCTTGACTGATGAG 58.523 41.667 8.11 0.00 0.00 2.90
4110 4575 6.024049 GCTGTTAATGCTGTTACTTTAGCTG 58.976 40.000 0.00 0.00 40.52 4.24
4115 4580 5.886960 ATGCTGTTACTTTAGCTGGAAAG 57.113 39.130 7.32 7.32 41.38 2.62
4120 4585 4.884744 TGTTACTTTAGCTGGAAAGCAACA 59.115 37.500 17.95 17.95 44.62 3.33
4128 4593 5.573337 AGCTGGAAAGCAACATAATCTTC 57.427 39.130 0.00 0.00 37.25 2.87
4133 4600 6.454795 TGGAAAGCAACATAATCTTCAAACC 58.545 36.000 0.00 0.00 0.00 3.27
4136 4603 6.655078 AAGCAACATAATCTTCAAACCAGT 57.345 33.333 0.00 0.00 0.00 4.00
4323 4791 3.118665 ACTGTTCAAGCAGCAACCATTTT 60.119 39.130 0.00 0.00 39.96 1.82
4328 4796 6.183360 TGTTCAAGCAGCAACCATTTTAGTTA 60.183 34.615 0.00 0.00 0.00 2.24
4386 4854 9.702494 TGATCACATGTCTCATTCAAGATATAC 57.298 33.333 0.00 0.00 0.00 1.47
4459 4927 1.674057 CCTCTTGGGCTCTTGACGT 59.326 57.895 0.00 0.00 0.00 4.34
4460 4928 0.671781 CCTCTTGGGCTCTTGACGTG 60.672 60.000 0.00 0.00 0.00 4.49
4479 4947 1.814394 TGCTGTGCTCATCAATGTTCC 59.186 47.619 0.00 0.00 0.00 3.62
4648 5116 4.125703 GCCATCATCGAAGAATCAACTCT 58.874 43.478 0.00 0.00 43.58 3.24
4685 5153 1.323271 GGAGAGACCGATCCAGTGCA 61.323 60.000 0.00 0.00 35.54 4.57
4689 5157 0.036952 AGACCGATCCAGTGCAAGTG 60.037 55.000 0.00 0.00 36.90 3.16
4690 5158 1.639298 GACCGATCCAGTGCAAGTGC 61.639 60.000 0.00 0.00 35.41 4.40
4691 5159 2.401766 CCGATCCAGTGCAAGTGCC 61.402 63.158 0.00 0.00 41.18 5.01
4692 5160 1.672030 CGATCCAGTGCAAGTGCCA 60.672 57.895 0.00 0.00 41.18 4.92
4693 5161 1.642037 CGATCCAGTGCAAGTGCCAG 61.642 60.000 0.00 0.00 41.18 4.85
4694 5162 0.607489 GATCCAGTGCAAGTGCCAGT 60.607 55.000 0.00 0.00 41.18 4.00
4742 5216 7.466804 TGTAAATTACCTGACCTTGGAAGAAT 58.533 34.615 0.18 0.00 0.00 2.40
4743 5217 7.610305 TGTAAATTACCTGACCTTGGAAGAATC 59.390 37.037 0.18 0.00 0.00 2.52
4744 5218 2.770164 ACCTGACCTTGGAAGAATCG 57.230 50.000 0.00 0.00 0.00 3.34
4766 5240 0.109039 GTTGTTGTTGTTGCCGGTGT 60.109 50.000 1.90 0.00 0.00 4.16
4781 5255 0.170339 GGTGTCGCCCATGTTTAAGC 59.830 55.000 0.00 0.00 0.00 3.09
4866 5340 4.757149 GGAGGTGGAGACATATGTTAATGC 59.243 45.833 10.30 5.61 46.14 3.56
4872 5346 5.013079 TGGAGACATATGTTAATGCCTAGGG 59.987 44.000 11.72 0.00 33.40 3.53
4937 5411 2.234168 TGGTACTGTAATGCGGCAGTAA 59.766 45.455 12.10 2.43 45.94 2.24
4938 5412 2.864343 GGTACTGTAATGCGGCAGTAAG 59.136 50.000 12.10 13.22 45.94 2.34
4940 5414 3.880047 ACTGTAATGCGGCAGTAAGTA 57.120 42.857 12.10 1.39 43.30 2.24
4941 5415 4.402056 ACTGTAATGCGGCAGTAAGTAT 57.598 40.909 12.10 0.00 43.30 2.12
4942 5416 4.119862 ACTGTAATGCGGCAGTAAGTATG 58.880 43.478 12.10 3.80 43.30 2.39
4943 5417 3.462982 TGTAATGCGGCAGTAAGTATGG 58.537 45.455 12.10 0.00 0.00 2.74
4944 5418 1.308998 AATGCGGCAGTAAGTATGGC 58.691 50.000 9.25 0.00 39.69 4.40
4945 5419 0.469917 ATGCGGCAGTAAGTATGGCT 59.530 50.000 9.25 0.00 40.84 4.75
4946 5420 0.461870 TGCGGCAGTAAGTATGGCTG 60.462 55.000 0.00 0.00 40.84 4.85
4947 5421 0.179084 GCGGCAGTAAGTATGGCTGA 60.179 55.000 0.00 0.00 40.84 4.26
4948 5422 1.541233 GCGGCAGTAAGTATGGCTGAT 60.541 52.381 0.00 0.00 40.84 2.90
4949 5423 2.408050 CGGCAGTAAGTATGGCTGATC 58.592 52.381 0.00 0.00 40.84 2.92
4995 5469 1.389106 GTAAATGTCGTCGTCCTGCAC 59.611 52.381 0.00 0.00 0.00 4.57
5003 5477 1.453155 GTCGTCCTGCACCAAATGAT 58.547 50.000 0.00 0.00 0.00 2.45
5005 5479 1.811965 TCGTCCTGCACCAAATGATTG 59.188 47.619 0.00 0.00 36.25 2.67
5013 5487 4.873817 TGCACCAAATGATTGTTCTTCTG 58.126 39.130 0.00 0.00 34.60 3.02
5020 5494 8.641541 ACCAAATGATTGTTCTTCTGTTACATT 58.358 29.630 0.00 0.00 34.60 2.71
5029 5503 6.072508 TGTTCTTCTGTTACATTGCCTGATTC 60.073 38.462 0.00 0.00 0.00 2.52
5039 5513 0.251297 TGCCTGATTCCCAGTTGTGG 60.251 55.000 0.00 0.00 44.56 4.17
5070 5544 0.953471 CGGCAAGTCGGGAAATGTGA 60.953 55.000 0.00 0.00 0.00 3.58
5071 5545 1.463674 GGCAAGTCGGGAAATGTGAT 58.536 50.000 0.00 0.00 0.00 3.06
5072 5546 1.818674 GGCAAGTCGGGAAATGTGATT 59.181 47.619 0.00 0.00 0.00 2.57
5073 5547 3.013921 GGCAAGTCGGGAAATGTGATTA 58.986 45.455 0.00 0.00 0.00 1.75
5074 5548 3.632145 GGCAAGTCGGGAAATGTGATTAT 59.368 43.478 0.00 0.00 0.00 1.28
5075 5549 4.261197 GGCAAGTCGGGAAATGTGATTATC 60.261 45.833 0.00 0.00 0.00 1.75
5080 5554 3.611025 GGGAAATGTGATTATCCCCCA 57.389 47.619 0.00 0.00 44.84 4.96
5081 5555 3.230976 GGGAAATGTGATTATCCCCCAC 58.769 50.000 0.00 0.00 44.84 4.61
5082 5556 3.117131 GGGAAATGTGATTATCCCCCACT 60.117 47.826 0.00 0.00 44.84 4.00
5083 5557 4.546674 GGAAATGTGATTATCCCCCACTT 58.453 43.478 0.00 0.00 0.00 3.16
5084 5558 4.584743 GGAAATGTGATTATCCCCCACTTC 59.415 45.833 0.00 0.00 0.00 3.01
5085 5559 3.884037 ATGTGATTATCCCCCACTTCC 57.116 47.619 0.00 0.00 0.00 3.46
5086 5560 2.567862 TGTGATTATCCCCCACTTCCA 58.432 47.619 0.00 0.00 0.00 3.53
5087 5561 2.922955 TGTGATTATCCCCCACTTCCAA 59.077 45.455 0.00 0.00 0.00 3.53
5088 5562 3.053693 TGTGATTATCCCCCACTTCCAAG 60.054 47.826 0.00 0.00 0.00 3.61
5112 5639 2.172505 CCAAGGCCATGTACATCCTACA 59.827 50.000 14.73 0.00 0.00 2.74
5114 5641 2.764269 AGGCCATGTACATCCTACAGT 58.236 47.619 13.17 0.00 0.00 3.55
5123 5651 4.591498 TGTACATCCTACAGTGAGGTTTGT 59.409 41.667 0.00 10.12 37.88 2.83
5146 5674 2.742053 GCTAAAATTGACACGCTGGAGA 59.258 45.455 0.00 0.00 0.00 3.71
5206 5794 0.610232 GGTTGAGATGGCCTTGCTGT 60.610 55.000 3.32 0.00 0.00 4.40
5229 5817 0.631753 TGGAAGGAACCAACCAACCA 59.368 50.000 6.57 0.00 36.96 3.67
5230 5818 1.007238 TGGAAGGAACCAACCAACCAA 59.993 47.619 6.57 0.00 36.96 3.67
5231 5819 1.686587 GGAAGGAACCAACCAACCAAG 59.313 52.381 0.00 0.00 0.00 3.61
5302 5892 2.189499 GCTTCGGCCATCATCACCC 61.189 63.158 2.24 0.00 34.32 4.61
5374 5968 5.357742 AAAAATGGAAGGTGTGAAGCTTT 57.642 34.783 0.00 0.00 0.00 3.51
5375 5969 4.326504 AAATGGAAGGTGTGAAGCTTTG 57.673 40.909 0.00 0.00 0.00 2.77
5376 5970 2.727123 TGGAAGGTGTGAAGCTTTGA 57.273 45.000 0.00 0.00 0.00 2.69
5377 5971 3.011566 TGGAAGGTGTGAAGCTTTGAA 57.988 42.857 0.00 0.00 0.00 2.69
5378 5972 2.951642 TGGAAGGTGTGAAGCTTTGAAG 59.048 45.455 0.00 0.00 0.00 3.02
5393 5987 5.319140 CTTTGAAGCATCATCACCATTGA 57.681 39.130 0.00 0.00 34.96 2.57
5394 5988 4.707030 TTGAAGCATCATCACCATTGAC 57.293 40.909 0.00 0.00 34.96 3.18
5395 5989 3.688235 TGAAGCATCATCACCATTGACA 58.312 40.909 0.00 0.00 33.38 3.58
5396 5990 4.080687 TGAAGCATCATCACCATTGACAA 58.919 39.130 0.00 0.00 33.38 3.18
5397 5991 4.082625 TGAAGCATCATCACCATTGACAAC 60.083 41.667 0.00 0.00 33.38 3.32
5398 5992 2.421073 AGCATCATCACCATTGACAACG 59.579 45.455 0.00 0.00 33.38 4.10
5399 5993 2.478370 GCATCATCACCATTGACAACGG 60.478 50.000 0.00 0.00 33.38 4.44
5400 5994 1.164411 TCATCACCATTGACAACGGC 58.836 50.000 0.00 0.00 33.38 5.68
5401 5995 0.179192 CATCACCATTGACAACGGCG 60.179 55.000 4.80 4.80 33.38 6.46
5402 5996 1.922135 ATCACCATTGACAACGGCGC 61.922 55.000 6.90 0.00 33.38 6.53
5403 5997 3.722295 ACCATTGACAACGGCGCG 61.722 61.111 6.90 0.00 0.00 6.86
5404 5998 3.722295 CCATTGACAACGGCGCGT 61.722 61.111 6.90 4.03 43.97 6.01
5405 5999 2.384309 CCATTGACAACGGCGCGTA 61.384 57.895 6.90 0.00 39.99 4.42
5406 6000 1.493750 CATTGACAACGGCGCGTAA 59.506 52.632 6.90 0.00 39.99 3.18
5407 6001 0.518355 CATTGACAACGGCGCGTAAG 60.518 55.000 6.90 1.52 39.99 2.34
5437 6031 4.647424 TGGGACAACAAGTTTCATTCAC 57.353 40.909 0.00 0.00 31.92 3.18
5438 6032 4.019858 TGGGACAACAAGTTTCATTCACA 58.980 39.130 0.00 0.00 31.92 3.58
5439 6033 4.464244 TGGGACAACAAGTTTCATTCACAA 59.536 37.500 0.00 0.00 31.92 3.33
5440 6034 5.043248 GGGACAACAAGTTTCATTCACAAG 58.957 41.667 0.00 0.00 0.00 3.16
5441 6035 5.043248 GGACAACAAGTTTCATTCACAAGG 58.957 41.667 0.00 0.00 0.00 3.61
5442 6036 5.163561 GGACAACAAGTTTCATTCACAAGGA 60.164 40.000 0.00 0.00 0.00 3.36
5443 6037 6.279513 ACAACAAGTTTCATTCACAAGGAA 57.720 33.333 0.00 0.00 40.46 3.36
5444 6038 6.696411 ACAACAAGTTTCATTCACAAGGAAA 58.304 32.000 0.00 0.00 39.39 3.13
5445 6039 7.330262 ACAACAAGTTTCATTCACAAGGAAAT 58.670 30.769 0.00 0.00 42.26 2.17
5446 6040 7.823799 ACAACAAGTTTCATTCACAAGGAAATT 59.176 29.630 0.00 0.00 42.26 1.82
5447 6041 8.667463 CAACAAGTTTCATTCACAAGGAAATTT 58.333 29.630 0.00 0.00 42.26 1.82
5479 6073 3.693085 TGAAGCTTTGAAGGATGATGCTC 59.307 43.478 0.00 0.00 0.00 4.26
5509 6103 2.384309 CCATTGACAACGGCGCGTA 61.384 57.895 6.90 0.00 39.99 4.42
5512 6106 0.947180 ATTGACAACGGCGCGTAAGT 60.947 50.000 6.90 2.26 39.99 2.24
5515 6109 2.431942 CAACGGCGCGTAAGTCCT 60.432 61.111 6.90 0.00 39.99 3.85
5542 6156 3.146847 GGGACTACAAGTTTCACAAGGG 58.853 50.000 0.00 0.00 0.00 3.95
5569 6183 2.951642 TGGAAGGTGTGAAGCTTTGAAG 59.048 45.455 0.00 0.00 0.00 3.02
5570 6184 2.294512 GGAAGGTGTGAAGCTTTGAAGG 59.705 50.000 0.00 0.00 0.00 3.46
5571 6185 3.214328 GAAGGTGTGAAGCTTTGAAGGA 58.786 45.455 0.00 0.00 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 0.593618 ATGAGATGGACGACGATCGG 59.406 55.000 20.98 4.82 45.59 4.18
32 33 5.659079 AGGGTTTAATTTTCGGCCATAATGA 59.341 36.000 2.24 0.00 0.00 2.57
33 34 5.752955 CAGGGTTTAATTTTCGGCCATAATG 59.247 40.000 2.24 0.00 0.00 1.90
43 44 5.344933 CGTTTGCTAGCAGGGTTTAATTTTC 59.655 40.000 18.45 0.00 0.00 2.29
59 60 3.742786 CAGCGCTTAATTTCGTTTGCTA 58.257 40.909 7.50 0.00 0.00 3.49
77 78 3.444916 TCACGTTAGTATTGCTAGCAGC 58.555 45.455 18.45 12.16 42.82 5.25
91 92 3.547413 CGACTCCAGCGATAATCACGTTA 60.547 47.826 0.00 0.00 0.00 3.18
101 102 4.521062 GCCAGCGACTCCAGCGAT 62.521 66.667 0.00 0.00 40.04 4.58
112 113 1.756375 GCAGATAAGTCGTGCCAGCG 61.756 60.000 0.00 0.00 0.00 5.18
114 115 0.179137 TCGCAGATAAGTCGTGCCAG 60.179 55.000 0.00 0.00 33.42 4.85
127 129 9.935682 GACATGATTAATCTTTTTATTCGCAGA 57.064 29.630 16.24 0.00 0.00 4.26
189 195 7.317390 ACACCGTCAAGAAAATGTTTAGTTTT 58.683 30.769 0.00 0.00 0.00 2.43
190 196 6.859017 ACACCGTCAAGAAAATGTTTAGTTT 58.141 32.000 0.00 0.00 0.00 2.66
192 198 6.445357 AACACCGTCAAGAAAATGTTTAGT 57.555 33.333 0.00 0.00 0.00 2.24
193 199 8.126700 AGTTAACACCGTCAAGAAAATGTTTAG 58.873 33.333 8.61 0.00 32.76 1.85
195 201 6.859017 AGTTAACACCGTCAAGAAAATGTTT 58.141 32.000 8.61 0.00 32.76 2.83
199 205 8.626526 ACATTTAGTTAACACCGTCAAGAAAAT 58.373 29.630 8.61 0.00 0.00 1.82
212 218 4.142773 GCTAGCGGCAACATTTAGTTAACA 60.143 41.667 8.61 0.00 38.74 2.41
228 234 2.268298 ACGTTGAATTAGTGCTAGCGG 58.732 47.619 10.77 0.00 0.00 5.52
229 235 2.281762 GGACGTTGAATTAGTGCTAGCG 59.718 50.000 10.77 0.00 0.00 4.26
231 237 3.508762 ACGGACGTTGAATTAGTGCTAG 58.491 45.455 0.00 0.00 0.00 3.42
234 240 2.159747 GGAACGGACGTTGAATTAGTGC 60.160 50.000 15.38 0.00 38.60 4.40
235 241 3.061322 TGGAACGGACGTTGAATTAGTG 58.939 45.455 15.38 0.00 38.60 2.74
251 257 7.964545 ATTTATTTTATCGCTTCGTTGGAAC 57.035 32.000 0.00 0.00 0.00 3.62
275 281 6.931840 GCTTATGTTTTGTGGGGAAATGTTTA 59.068 34.615 0.00 0.00 0.00 2.01
276 282 5.762711 GCTTATGTTTTGTGGGGAAATGTTT 59.237 36.000 0.00 0.00 0.00 2.83
279 285 4.931002 CAGCTTATGTTTTGTGGGGAAATG 59.069 41.667 0.00 0.00 0.00 2.32
281 287 3.244044 GCAGCTTATGTTTTGTGGGGAAA 60.244 43.478 0.00 0.00 0.00 3.13
284 290 1.617850 TGCAGCTTATGTTTTGTGGGG 59.382 47.619 0.00 0.00 0.00 4.96
286 292 3.004629 TGACTGCAGCTTATGTTTTGTGG 59.995 43.478 15.27 0.00 0.00 4.17
287 293 4.227512 TGACTGCAGCTTATGTTTTGTG 57.772 40.909 15.27 0.00 0.00 3.33
288 294 4.916983 TTGACTGCAGCTTATGTTTTGT 57.083 36.364 15.27 0.00 0.00 2.83
299 305 0.867746 TGTCGATGTTTGACTGCAGC 59.132 50.000 15.27 7.45 37.26 5.25
301 307 4.513318 TGTTATTGTCGATGTTTGACTGCA 59.487 37.500 0.00 0.00 37.26 4.41
307 313 4.544302 CGTCGTTGTTATTGTCGATGTTTG 59.456 41.667 0.00 0.00 35.49 2.93
312 318 3.176708 CCTCGTCGTTGTTATTGTCGAT 58.823 45.455 0.00 0.00 34.93 3.59
318 324 1.356527 GCGGCCTCGTCGTTGTTATT 61.357 55.000 0.00 0.00 38.89 1.40
321 327 4.595538 TGCGGCCTCGTCGTTGTT 62.596 61.111 0.00 0.00 38.89 2.83
328 334 4.626081 AAAGCAGTGCGGCCTCGT 62.626 61.111 10.00 0.00 38.89 4.18
331 337 2.127232 AAACAAAGCAGTGCGGCCT 61.127 52.632 10.00 0.00 0.00 5.19
332 338 1.950630 CAAACAAAGCAGTGCGGCC 60.951 57.895 10.00 0.00 0.00 6.13
333 339 1.226945 ACAAACAAAGCAGTGCGGC 60.227 52.632 10.00 0.00 0.00 6.53
334 340 1.481819 GCACAAACAAAGCAGTGCGG 61.482 55.000 10.00 6.20 46.35 5.69
335 341 1.919340 GCACAAACAAAGCAGTGCG 59.081 52.632 10.00 0.00 46.35 5.34
337 343 2.159198 AGAAGGCACAAACAAAGCAGTG 60.159 45.455 0.00 0.00 35.19 3.66
338 344 2.099756 GAGAAGGCACAAACAAAGCAGT 59.900 45.455 0.00 0.00 0.00 4.40
339 345 2.735823 GAGAAGGCACAAACAAAGCAG 58.264 47.619 0.00 0.00 0.00 4.24
340 346 1.065401 CGAGAAGGCACAAACAAAGCA 59.935 47.619 0.00 0.00 0.00 3.91
341 347 1.065551 ACGAGAAGGCACAAACAAAGC 59.934 47.619 0.00 0.00 0.00 3.51
342 348 2.599848 CGACGAGAAGGCACAAACAAAG 60.600 50.000 0.00 0.00 0.00 2.77
354 360 1.656095 CAAGCTTAAGCCGACGAGAAG 59.344 52.381 23.71 0.22 43.38 2.85
355 361 1.271379 TCAAGCTTAAGCCGACGAGAA 59.729 47.619 23.71 0.00 43.38 2.87
364 370 7.502120 TTCATATCCATCTTCAAGCTTAAGC 57.498 36.000 20.09 20.09 42.49 3.09
458 494 5.506649 GCAGGATTTTCGCGGGAAATTTATA 60.507 40.000 25.75 12.77 41.54 0.98
459 495 4.736464 GCAGGATTTTCGCGGGAAATTTAT 60.736 41.667 25.75 17.29 41.54 1.40
460 496 3.428316 GCAGGATTTTCGCGGGAAATTTA 60.428 43.478 25.75 13.46 41.54 1.40
461 497 2.673893 GCAGGATTTTCGCGGGAAATTT 60.674 45.455 25.75 17.15 41.54 1.82
462 498 1.135112 GCAGGATTTTCGCGGGAAATT 60.135 47.619 25.75 21.95 41.54 1.82
464 500 0.891449 TGCAGGATTTTCGCGGGAAA 60.891 50.000 22.19 22.19 40.29 3.13
547 592 1.959226 CCGGGCGGATGGATTAACG 60.959 63.158 0.00 0.00 37.50 3.18
584 630 2.368655 GGTAACGGAAGAAGCGGTTA 57.631 50.000 0.00 0.00 33.97 2.85
1002 1053 4.385405 AGCACCAGAGCACGGAGC 62.385 66.667 6.40 6.40 46.19 4.70
1003 1054 2.433838 CAGCACCAGAGCACGGAG 60.434 66.667 0.00 0.00 36.85 4.63
1004 1055 4.687215 GCAGCACCAGAGCACGGA 62.687 66.667 0.00 0.00 36.85 4.69
1005 1056 4.994471 TGCAGCACCAGAGCACGG 62.994 66.667 0.00 0.00 36.85 4.94
1006 1057 3.420606 CTGCAGCACCAGAGCACG 61.421 66.667 0.00 0.00 34.77 5.34
1007 1058 3.054503 CCTGCAGCACCAGAGCAC 61.055 66.667 8.66 0.00 34.77 4.40
1010 1061 4.383861 TCGCCTGCAGCACCAGAG 62.384 66.667 8.66 0.00 44.04 3.35
1011 1062 4.383861 CTCGCCTGCAGCACCAGA 62.384 66.667 8.66 1.57 44.04 3.86
1042 1093 4.699522 GTGGCCGGTGACAGGGTC 62.700 72.222 1.90 0.00 0.00 4.46
1044 1095 3.976701 GATGTGGCCGGTGACAGGG 62.977 68.421 1.90 0.00 0.00 4.45
1045 1096 2.436646 GATGTGGCCGGTGACAGG 60.437 66.667 1.90 0.00 0.00 4.00
1046 1097 1.078214 ATGATGTGGCCGGTGACAG 60.078 57.895 1.90 0.00 0.00 3.51
1047 1098 1.078497 GATGATGTGGCCGGTGACA 60.078 57.895 1.90 6.74 0.00 3.58
1048 1099 0.811616 GAGATGATGTGGCCGGTGAC 60.812 60.000 1.90 0.00 0.00 3.67
1049 1100 1.522092 GAGATGATGTGGCCGGTGA 59.478 57.895 1.90 0.00 0.00 4.02
1050 1101 1.524621 GGAGATGATGTGGCCGGTG 60.525 63.158 1.90 0.00 0.00 4.94
1051 1102 1.995066 TGGAGATGATGTGGCCGGT 60.995 57.895 1.90 0.00 0.00 5.28
1052 1103 1.524621 GTGGAGATGATGTGGCCGG 60.525 63.158 0.00 0.00 0.00 6.13
1053 1104 1.524621 GGTGGAGATGATGTGGCCG 60.525 63.158 0.00 0.00 0.00 6.13
1054 1105 0.749454 GTGGTGGAGATGATGTGGCC 60.749 60.000 0.00 0.00 0.00 5.36
1055 1106 0.749454 GGTGGTGGAGATGATGTGGC 60.749 60.000 0.00 0.00 0.00 5.01
1056 1107 0.620030 TGGTGGTGGAGATGATGTGG 59.380 55.000 0.00 0.00 0.00 4.17
1057 1108 2.569059 GATGGTGGTGGAGATGATGTG 58.431 52.381 0.00 0.00 0.00 3.21
1058 1109 1.139654 CGATGGTGGTGGAGATGATGT 59.860 52.381 0.00 0.00 0.00 3.06
1059 1110 1.541889 CCGATGGTGGTGGAGATGATG 60.542 57.143 0.00 0.00 0.00 3.07
1060 1111 0.761187 CCGATGGTGGTGGAGATGAT 59.239 55.000 0.00 0.00 0.00 2.45
1061 1112 1.971505 GCCGATGGTGGTGGAGATGA 61.972 60.000 0.00 0.00 0.00 2.92
1062 1113 1.524621 GCCGATGGTGGTGGAGATG 60.525 63.158 0.00 0.00 0.00 2.90
1063 1114 2.911143 GCCGATGGTGGTGGAGAT 59.089 61.111 0.00 0.00 0.00 2.75
1064 1115 3.770040 CGCCGATGGTGGTGGAGA 61.770 66.667 0.00 0.00 35.83 3.71
1071 1122 2.106683 GTTCTTCCCGCCGATGGTG 61.107 63.158 0.00 0.00 0.00 4.17
1072 1123 2.267961 GTTCTTCCCGCCGATGGT 59.732 61.111 0.00 0.00 0.00 3.55
1073 1124 2.890474 CGTTCTTCCCGCCGATGG 60.890 66.667 0.00 0.00 0.00 3.51
1074 1125 2.890474 CCGTTCTTCCCGCCGATG 60.890 66.667 0.00 0.00 0.00 3.84
1075 1126 4.832608 GCCGTTCTTCCCGCCGAT 62.833 66.667 0.00 0.00 0.00 4.18
1082 1133 3.894547 TTGGGCTCGCCGTTCTTCC 62.895 63.158 1.24 0.00 36.85 3.46
1083 1134 2.358247 TTGGGCTCGCCGTTCTTC 60.358 61.111 1.24 0.00 36.85 2.87
1084 1135 2.358737 CTTGGGCTCGCCGTTCTT 60.359 61.111 1.24 0.00 36.85 2.52
1085 1136 3.302347 CTCTTGGGCTCGCCGTTCT 62.302 63.158 1.24 0.00 36.85 3.01
1086 1137 2.815647 CTCTTGGGCTCGCCGTTC 60.816 66.667 1.24 0.00 36.85 3.95
1098 1513 1.584380 GCAAGCTGCTCACCCTCTTG 61.584 60.000 1.00 0.00 40.96 3.02
1161 1577 0.961019 GCAGGCACATTTGACCAGAA 59.039 50.000 0.00 0.00 0.00 3.02
1193 1609 0.550914 ACAGCACAGGAAGGGAAACA 59.449 50.000 0.00 0.00 0.00 2.83
1197 1613 1.352622 ACCAACAGCACAGGAAGGGA 61.353 55.000 0.00 0.00 0.00 4.20
1198 1614 1.151450 ACCAACAGCACAGGAAGGG 59.849 57.895 0.00 0.00 0.00 3.95
1249 1665 4.227864 AGCTAAACATTTGCTAGAGGCT 57.772 40.909 0.00 0.00 42.39 4.58
1251 1667 7.121315 AGGTTAAAGCTAAACATTTGCTAGAGG 59.879 37.037 12.46 0.00 35.85 3.69
1318 1745 1.066502 TGATTTCCTGGACGAATCGCA 60.067 47.619 13.66 0.00 33.55 5.10
1328 1755 2.353889 CTGATTCGCACTGATTTCCTGG 59.646 50.000 0.00 0.00 0.00 4.45
1339 1766 1.542544 GCAAATCAGCTGATTCGCAC 58.457 50.000 36.10 23.79 42.38 5.34
1345 1772 0.682209 AAGCCCGCAAATCAGCTGAT 60.682 50.000 23.75 23.75 35.30 2.90
1346 1773 0.895100 AAAGCCCGCAAATCAGCTGA 60.895 50.000 20.79 20.79 35.30 4.26
1362 1790 2.289002 GCTCTGTGTCTGGTCAACAAAG 59.711 50.000 0.00 0.00 33.93 2.77
1376 1804 4.321527 GGAAATGAAGGAAAAGGCTCTGTG 60.322 45.833 0.00 0.00 0.00 3.66
1381 1809 3.324846 GGTTGGAAATGAAGGAAAAGGCT 59.675 43.478 0.00 0.00 0.00 4.58
1383 1811 3.572255 TCGGTTGGAAATGAAGGAAAAGG 59.428 43.478 0.00 0.00 0.00 3.11
1399 1827 0.662970 CCGCACACCAAAATCGGTTG 60.663 55.000 0.00 0.00 37.07 3.77
1401 1829 2.914908 GCCGCACACCAAAATCGGT 61.915 57.895 0.00 0.00 41.89 4.69
1403 1831 1.442520 CTGCCGCACACCAAAATCG 60.443 57.895 0.00 0.00 0.00 3.34
1404 1832 0.109597 CTCTGCCGCACACCAAAATC 60.110 55.000 0.00 0.00 0.00 2.17
1405 1833 0.537143 TCTCTGCCGCACACCAAAAT 60.537 50.000 0.00 0.00 0.00 1.82
1406 1834 0.749818 TTCTCTGCCGCACACCAAAA 60.750 50.000 0.00 0.00 0.00 2.44
1436 1864 1.807142 CAGGCAGTAGATCGAGCGATA 59.193 52.381 5.24 0.00 34.60 2.92
1481 1909 5.292101 AGCGCTTAGAACATGATTTCAGTAC 59.708 40.000 2.64 0.00 0.00 2.73
1485 1913 6.925610 ATTAGCGCTTAGAACATGATTTCA 57.074 33.333 18.68 0.00 0.00 2.69
1511 1940 1.299541 ACGACAACCTGAGCACAAAG 58.700 50.000 0.00 0.00 0.00 2.77
1523 1952 9.673454 AAAAATGTATCCTCTAAAAACGACAAC 57.327 29.630 0.00 0.00 0.00 3.32
1559 1988 8.786898 GCTAATTGTCTGCAATCAGGATTAATA 58.213 33.333 0.00 0.00 43.89 0.98
1560 1989 7.504911 AGCTAATTGTCTGCAATCAGGATTAAT 59.495 33.333 0.00 0.00 43.89 1.40
1594 2023 0.179161 CAGTTCCTACCACTCGCTCG 60.179 60.000 0.00 0.00 0.00 5.03
1600 2029 4.398319 CAAATGAACCAGTTCCTACCACT 58.602 43.478 8.01 0.00 38.77 4.00
1642 2071 1.743394 CAAACCATAAGACGAAGGGGC 59.257 52.381 0.00 0.00 0.00 5.80
1643 2072 1.743394 GCAAACCATAAGACGAAGGGG 59.257 52.381 0.00 0.00 0.00 4.79
1649 2078 2.744202 AGCAGAAGCAAACCATAAGACG 59.256 45.455 0.00 0.00 45.49 4.18
1654 2083 5.476599 ACACATAAAGCAGAAGCAAACCATA 59.523 36.000 0.00 0.00 45.49 2.74
1655 2084 4.281688 ACACATAAAGCAGAAGCAAACCAT 59.718 37.500 0.00 0.00 45.49 3.55
1698 2127 6.199937 AGCAGTTGAATTCGATAAGCATTT 57.800 33.333 15.17 0.00 0.00 2.32
1784 2213 0.320160 GGTTCTTGTAACGGCGGTCT 60.320 55.000 13.24 0.00 0.00 3.85
1787 2216 1.665599 ACGGTTCTTGTAACGGCGG 60.666 57.895 13.24 0.00 0.00 6.13
1844 2273 1.336131 AGCAGTGCTTCAGAGAGACA 58.664 50.000 13.14 0.00 33.89 3.41
1871 2300 0.883833 GTTCATCCCTGCTTGTGGTG 59.116 55.000 0.00 0.00 0.00 4.17
1889 2318 3.244700 CCATGACAAGGTTCAGGAAGAGT 60.245 47.826 0.00 0.00 28.33 3.24
1892 2321 3.244700 ACTCCATGACAAGGTTCAGGAAG 60.245 47.826 0.00 0.00 28.33 3.46
1994 2423 5.105351 TGGTTCACAGACCTGATACATGTAG 60.105 44.000 11.91 0.00 40.47 2.74
2010 2439 5.708230 GGAAAGTGTAATATGGTGGTTCACA 59.292 40.000 0.38 0.00 35.86 3.58
2019 2448 2.878406 CGGCCAGGAAAGTGTAATATGG 59.122 50.000 2.24 0.00 0.00 2.74
2026 2455 2.713531 ATTGGCGGCCAGGAAAGTGT 62.714 55.000 22.59 0.00 33.81 3.55
2032 2461 2.274104 GGTTATTGGCGGCCAGGA 59.726 61.111 22.59 9.06 33.81 3.86
2043 2472 2.352715 GCAGAGCAAAAAGGCGGTTATT 60.353 45.455 0.00 0.00 39.27 1.40
2049 2478 2.095059 ACATTAGCAGAGCAAAAAGGCG 60.095 45.455 0.00 0.00 39.27 5.52
2055 2484 8.152898 AGATGATACATACATTAGCAGAGCAAA 58.847 33.333 0.00 0.00 0.00 3.68
2058 2487 6.035866 GCAGATGATACATACATTAGCAGAGC 59.964 42.308 0.00 0.00 32.40 4.09
2082 2511 4.209911 CCTCTAAAAAGCTGCAAACAAAGC 59.790 41.667 1.02 0.00 39.82 3.51
2083 2512 4.746611 CCCTCTAAAAAGCTGCAAACAAAG 59.253 41.667 1.02 0.00 0.00 2.77
2107 2536 5.616270 TGGAACAGTGTGAACATAAGCTAA 58.384 37.500 0.00 0.00 0.00 3.09
2211 2640 6.125029 AGAGACCAATTCAGGACCAATTATG 58.875 40.000 0.00 0.00 0.00 1.90
2215 2644 4.290722 AGAAGAGACCAATTCAGGACCAAT 59.709 41.667 0.00 0.00 0.00 3.16
2296 2725 4.481930 TCAACATACCAGAACTTTTGCG 57.518 40.909 0.00 0.00 0.00 4.85
2312 2741 5.898120 TGATTCTTAAGGGGGAAATCAACA 58.102 37.500 11.94 0.00 0.00 3.33
2344 2773 8.891671 ATTCAAAACTAAATGCAACACTGAAT 57.108 26.923 0.00 0.00 0.00 2.57
2452 2881 7.121168 CACGTTATCATGGGGAAAATAGCATAT 59.879 37.037 0.00 0.00 0.00 1.78
2460 2889 5.806818 TCTTACACGTTATCATGGGGAAAA 58.193 37.500 0.00 0.00 0.00 2.29
2464 2893 4.703897 ACATCTTACACGTTATCATGGGG 58.296 43.478 0.00 0.00 0.00 4.96
2465 2894 4.444388 CGACATCTTACACGTTATCATGGG 59.556 45.833 0.00 0.00 0.00 4.00
2487 2917 1.402259 AGGACATACTCGCAAGACTCG 59.598 52.381 0.00 0.00 45.01 4.18
2504 2934 2.226437 GCTGCGATTTCAAAACTCAGGA 59.774 45.455 0.22 0.00 0.00 3.86
2511 2941 5.461737 CCAACTTTAAGCTGCGATTTCAAAA 59.538 36.000 0.00 0.00 0.00 2.44
2555 2985 6.074648 TGTCAAGTATGGGAAATTTTGTCCT 58.925 36.000 0.00 0.00 35.33 3.85
2556 2986 6.015434 ACTGTCAAGTATGGGAAATTTTGTCC 60.015 38.462 0.00 0.00 33.79 4.02
2558 2988 6.015434 GGACTGTCAAGTATGGGAAATTTTGT 60.015 38.462 10.38 0.00 36.52 2.83
2559 2989 6.015519 TGGACTGTCAAGTATGGGAAATTTTG 60.016 38.462 10.38 0.00 36.52 2.44
2560 2990 6.074648 TGGACTGTCAAGTATGGGAAATTTT 58.925 36.000 10.38 0.00 36.52 1.82
2563 2993 4.927267 TGGACTGTCAAGTATGGGAAAT 57.073 40.909 10.38 0.00 36.52 2.17
2588 3027 8.809066 ACCAATTATACAATGGATCAATCATGG 58.191 33.333 0.00 0.00 0.00 3.66
2631 3070 5.227569 ACCCAATTTGGAAAACAAGATCC 57.772 39.130 17.24 0.00 40.96 3.36
2632 3071 6.287525 TGAACCCAATTTGGAAAACAAGATC 58.712 36.000 17.24 3.45 40.96 2.75
2634 3073 5.683876 TGAACCCAATTTGGAAAACAAGA 57.316 34.783 17.24 0.00 40.96 3.02
2683 3122 5.674525 CAGTTGGGAGTAATGAATAGAGCA 58.325 41.667 0.00 0.00 0.00 4.26
2724 3163 9.888878 CCAAGATAAAGATGCAGTTTATGTATG 57.111 33.333 17.39 13.86 33.94 2.39
2725 3164 9.632638 ACCAAGATAAAGATGCAGTTTATGTAT 57.367 29.630 17.39 5.18 36.88 2.29
2737 3176 5.404946 CAACCTTGCACCAAGATAAAGATG 58.595 41.667 6.54 0.00 43.42 2.90
2763 3203 1.754803 CATACGACCAAGGTCAGGCTA 59.245 52.381 18.57 3.36 44.77 3.93
2778 3218 4.346734 AGCAGATGCAAGTTTTCATACG 57.653 40.909 7.68 0.00 45.16 3.06
2806 3246 5.355350 AGAGAGCGGAAATAACCAAATTGAG 59.645 40.000 0.00 0.00 0.00 3.02
2818 3258 3.971245 AGAACTGAAGAGAGCGGAAAT 57.029 42.857 0.00 0.00 0.00 2.17
2824 3264 4.258702 TGTGGTAAGAACTGAAGAGAGC 57.741 45.455 0.00 0.00 0.00 4.09
2826 3266 5.808366 ACATGTGGTAAGAACTGAAGAGA 57.192 39.130 0.00 0.00 0.00 3.10
2831 3271 6.170506 GGTCAATACATGTGGTAAGAACTGA 58.829 40.000 9.11 0.00 35.14 3.41
2832 3272 5.937540 TGGTCAATACATGTGGTAAGAACTG 59.062 40.000 9.11 0.00 35.14 3.16
2835 3275 6.127758 GCAATGGTCAATACATGTGGTAAGAA 60.128 38.462 9.11 0.00 35.14 2.52
2839 3279 3.951037 GGCAATGGTCAATACATGTGGTA 59.049 43.478 9.11 0.00 36.16 3.25
2843 3283 3.053395 AGAGGGCAATGGTCAATACATGT 60.053 43.478 2.69 2.69 0.00 3.21
2963 3403 5.011431 TCCAGCTGACCATATGTCTATTGAG 59.989 44.000 17.39 0.00 44.75 3.02
3003 3443 4.513406 AACCAACCTGACCAAGAAGTAA 57.487 40.909 0.00 0.00 0.00 2.24
3038 3478 1.578897 ACCCAAACAAGGCCAAAACT 58.421 45.000 5.01 0.00 0.00 2.66
3099 3547 6.567687 TGACAAATACAACAACACATAGGG 57.432 37.500 0.00 0.00 0.00 3.53
3111 3559 4.518970 GGAAACAGAGGCTGACAAATACAA 59.481 41.667 0.00 0.00 35.18 2.41
3196 3644 8.562892 CAGAAGAATACAAGAAGACAATGTTGT 58.437 33.333 0.00 0.00 45.65 3.32
3213 3661 5.759059 AGAAACATCCATGGCAGAAGAATA 58.241 37.500 6.96 0.00 0.00 1.75
3214 3662 4.607239 AGAAACATCCATGGCAGAAGAAT 58.393 39.130 6.96 0.00 0.00 2.40
3293 3742 4.903049 TCGGTATAGTTGGGGTTCATACAT 59.097 41.667 0.00 0.00 0.00 2.29
3296 3745 4.549668 ACTCGGTATAGTTGGGGTTCATA 58.450 43.478 0.00 0.00 0.00 2.15
3377 3826 5.009811 TGACATGATGCAGTTGATTCAACAA 59.990 36.000 26.73 14.75 45.66 2.83
3500 3953 1.558233 AGTAGAGCAACCCGTTAGCT 58.442 50.000 0.00 0.00 42.17 3.32
3634 4087 3.829886 TTAAGAGCAATCACAAAGCCG 57.170 42.857 0.00 0.00 0.00 5.52
3657 4110 0.405585 ACCCAGCCACTTAGCACAAT 59.594 50.000 0.00 0.00 34.23 2.71
3705 4159 6.705825 ACAAAAATGCAAGAGGTAAAATGACC 59.294 34.615 0.00 0.00 40.08 4.02
3708 4162 7.011295 ACACACAAAAATGCAAGAGGTAAAATG 59.989 33.333 0.00 0.00 0.00 2.32
3723 4177 7.801716 ACTAGTATCACACACACACAAAAAT 57.198 32.000 0.00 0.00 0.00 1.82
3729 4183 5.805486 CCATGTACTAGTATCACACACACAC 59.195 44.000 5.75 0.00 0.00 3.82
3853 4312 4.384208 GGTGCAGAAGAGCCTCCTTTTATA 60.384 45.833 0.00 0.00 0.00 0.98
3894 4353 6.847956 CATTGATGCTTCCAAAACTCAAAA 57.152 33.333 0.00 0.00 0.00 2.44
3919 4383 5.964887 GCTAATCAGTGACTGAAAGCTAG 57.035 43.478 30.31 22.57 44.04 3.42
3994 4458 6.046290 TCATCAGTCAAGACTCATCAACAT 57.954 37.500 0.00 0.00 40.20 2.71
4016 4480 4.833390 ACTATAAAGTTGCACCCACTCTC 58.167 43.478 0.00 0.00 29.00 3.20
4017 4481 4.286032 TGACTATAAAGTTGCACCCACTCT 59.714 41.667 0.00 0.00 35.56 3.24
4018 4482 4.392138 GTGACTATAAAGTTGCACCCACTC 59.608 45.833 0.00 0.00 35.56 3.51
4086 4551 6.024049 CAGCTAAAGTAACAGCATTAACAGC 58.976 40.000 0.00 0.00 40.36 4.40
4110 4575 6.454795 TGGTTTGAAGATTATGTTGCTTTCC 58.545 36.000 0.00 0.00 0.00 3.13
4115 4580 8.462016 AGATTACTGGTTTGAAGATTATGTTGC 58.538 33.333 0.00 0.00 0.00 4.17
4164 4631 1.926510 GCTGCACAGGAAAACAAACAC 59.073 47.619 0.00 0.00 0.00 3.32
4243 4710 2.763710 GGGAATGGGCGGCCATTT 60.764 61.111 44.79 32.33 40.06 2.32
4296 4764 3.751175 GGTTGCTGCTTGAACAGTGTATA 59.249 43.478 0.00 0.00 39.96 1.47
4328 4796 9.442047 CTGAAACCAGTCTATCTGTTTTTCTAT 57.558 33.333 14.39 0.00 38.55 1.98
4337 4805 3.265791 GTGCCTGAAACCAGTCTATCTG 58.734 50.000 0.00 0.00 43.27 2.90
4342 4810 1.421268 TCATGTGCCTGAAACCAGTCT 59.579 47.619 0.00 0.00 0.00 3.24
4348 4816 3.766151 CATGTGATCATGTGCCTGAAAC 58.234 45.455 0.00 0.00 44.37 2.78
4386 4854 7.284034 ACAGCCTTCCTAATTATTGAACTGATG 59.716 37.037 15.24 10.90 0.00 3.07
4457 4925 0.800631 ACATTGATGAGCACAGCACG 59.199 50.000 0.28 0.00 42.20 5.34
4459 4927 1.814394 GGAACATTGATGAGCACAGCA 59.186 47.619 0.00 0.00 40.76 4.41
4460 4928 2.089980 AGGAACATTGATGAGCACAGC 58.910 47.619 0.00 0.00 0.00 4.40
4479 4947 1.202268 GCTAGCTGCATTGCCAGAAAG 60.202 52.381 7.70 0.00 42.31 2.62
4685 5153 0.395586 TTTCACTGGCACTGGCACTT 60.396 50.000 0.07 0.00 43.71 3.16
4689 5157 0.595095 CTTCTTTCACTGGCACTGGC 59.405 55.000 0.00 0.00 40.13 4.85
4690 5158 1.972872 ACTTCTTTCACTGGCACTGG 58.027 50.000 0.00 0.00 0.00 4.00
4691 5159 3.466836 TGTACTTCTTTCACTGGCACTG 58.533 45.455 0.00 0.00 0.00 3.66
4692 5160 3.838244 TGTACTTCTTTCACTGGCACT 57.162 42.857 0.00 0.00 0.00 4.40
4693 5161 3.877508 AGTTGTACTTCTTTCACTGGCAC 59.122 43.478 0.00 0.00 0.00 5.01
4694 5162 4.150897 AGTTGTACTTCTTTCACTGGCA 57.849 40.909 0.00 0.00 0.00 4.92
4742 5216 0.097325 GGCAACAACAACAACGACGA 59.903 50.000 0.00 0.00 0.00 4.20
4743 5217 1.191211 CGGCAACAACAACAACGACG 61.191 55.000 0.00 0.00 0.00 5.12
4744 5218 0.863957 CCGGCAACAACAACAACGAC 60.864 55.000 0.00 0.00 0.00 4.34
4766 5240 1.832883 ATGTGCTTAAACATGGGCGA 58.167 45.000 0.00 0.00 39.32 5.54
4866 5340 2.568623 AAACAAGTCACAGCCCTAGG 57.431 50.000 0.06 0.06 0.00 3.02
4872 5346 8.628882 AAAATGTACTTAAAACAAGTCACAGC 57.371 30.769 0.00 0.00 0.00 4.40
4907 5381 3.055675 GCATTACAGTACCACTACCACCA 60.056 47.826 0.00 0.00 0.00 4.17
4908 5382 3.528532 GCATTACAGTACCACTACCACC 58.471 50.000 0.00 0.00 0.00 4.61
4909 5383 3.184541 CGCATTACAGTACCACTACCAC 58.815 50.000 0.00 0.00 0.00 4.16
4937 5411 3.956199 CAAAACATGGGATCAGCCATACT 59.044 43.478 3.45 0.00 38.95 2.12
4938 5412 3.701040 ACAAAACATGGGATCAGCCATAC 59.299 43.478 3.45 0.00 38.95 2.39
4940 5414 2.762327 GACAAAACATGGGATCAGCCAT 59.238 45.455 0.00 0.00 38.95 4.40
4941 5415 2.170166 GACAAAACATGGGATCAGCCA 58.830 47.619 0.00 0.00 38.95 4.75
4942 5416 1.478105 GGACAAAACATGGGATCAGCC 59.522 52.381 0.00 0.00 0.00 4.85
4943 5417 1.478105 GGGACAAAACATGGGATCAGC 59.522 52.381 0.00 0.00 0.00 4.26
4944 5418 3.091633 AGGGACAAAACATGGGATCAG 57.908 47.619 0.00 0.00 0.00 2.90
4945 5419 3.164268 CAAGGGACAAAACATGGGATCA 58.836 45.455 0.00 0.00 0.00 2.92
4946 5420 3.165071 ACAAGGGACAAAACATGGGATC 58.835 45.455 0.00 0.00 0.00 3.36
4947 5421 3.165071 GACAAGGGACAAAACATGGGAT 58.835 45.455 0.00 0.00 0.00 3.85
4948 5422 2.593026 GACAAGGGACAAAACATGGGA 58.407 47.619 0.00 0.00 0.00 4.37
4949 5423 1.618343 GGACAAGGGACAAAACATGGG 59.382 52.381 0.00 0.00 0.00 4.00
4995 5469 8.918658 CAATGTAACAGAAGAACAATCATTTGG 58.081 33.333 0.00 0.00 37.15 3.28
5003 5477 5.129634 TCAGGCAATGTAACAGAAGAACAA 58.870 37.500 0.00 0.00 0.00 2.83
5005 5479 5.886960 ATCAGGCAATGTAACAGAAGAAC 57.113 39.130 0.00 0.00 0.00 3.01
5029 5503 3.751246 CCATGCGCCACAACTGGG 61.751 66.667 4.18 0.00 38.13 4.45
5039 5513 2.049618 TTGCCGAAAACCATGCGC 60.050 55.556 0.00 0.00 0.00 6.09
5070 5544 3.052869 GGAACTTGGAAGTGGGGGATAAT 60.053 47.826 0.00 0.00 39.66 1.28
5071 5545 2.310647 GGAACTTGGAAGTGGGGGATAA 59.689 50.000 0.00 0.00 39.66 1.75
5072 5546 1.920351 GGAACTTGGAAGTGGGGGATA 59.080 52.381 0.00 0.00 39.66 2.59
5073 5547 0.704664 GGAACTTGGAAGTGGGGGAT 59.295 55.000 0.00 0.00 39.66 3.85
5074 5548 0.699577 TGGAACTTGGAAGTGGGGGA 60.700 55.000 0.00 0.00 39.66 4.81
5075 5549 0.187361 TTGGAACTTGGAAGTGGGGG 59.813 55.000 0.00 0.00 39.66 5.40
5078 5552 0.961753 GCCTTGGAACTTGGAAGTGG 59.038 55.000 0.00 0.00 39.66 4.00
5080 5554 0.555769 TGGCCTTGGAACTTGGAAGT 59.444 50.000 3.32 0.00 42.04 3.01
5081 5555 1.547372 CATGGCCTTGGAACTTGGAAG 59.453 52.381 10.81 0.00 0.00 3.46
5082 5556 1.133199 ACATGGCCTTGGAACTTGGAA 60.133 47.619 21.67 0.00 0.00 3.53
5083 5557 0.482446 ACATGGCCTTGGAACTTGGA 59.518 50.000 21.67 0.00 0.00 3.53
5084 5558 1.818674 GTACATGGCCTTGGAACTTGG 59.181 52.381 21.67 0.00 0.00 3.61
5085 5559 2.513753 TGTACATGGCCTTGGAACTTG 58.486 47.619 21.67 1.58 0.00 3.16
5086 5560 2.969821 TGTACATGGCCTTGGAACTT 57.030 45.000 21.67 3.97 0.00 2.66
5087 5561 2.357154 GGATGTACATGGCCTTGGAACT 60.357 50.000 21.67 4.97 0.00 3.01
5088 5562 2.024414 GGATGTACATGGCCTTGGAAC 58.976 52.381 21.67 18.17 0.00 3.62
5112 5639 6.127479 TGTCAATTTTAGCAACAAACCTCACT 60.127 34.615 0.00 0.00 0.00 3.41
5114 5641 6.039616 GTGTCAATTTTAGCAACAAACCTCA 58.960 36.000 0.00 0.00 0.00 3.86
5123 5651 2.881513 TCCAGCGTGTCAATTTTAGCAA 59.118 40.909 0.00 0.00 0.00 3.91
5175 5763 0.620700 TCTCAACCTAAGGGCCCTCC 60.621 60.000 28.84 0.00 35.63 4.30
5206 5794 1.217916 TGGTTGGTTCCTTCCACTCA 58.782 50.000 0.00 0.00 37.20 3.41
5229 5817 0.843984 CCCGTCCCAACCCATATCTT 59.156 55.000 0.00 0.00 0.00 2.40
5230 5818 0.327191 ACCCGTCCCAACCCATATCT 60.327 55.000 0.00 0.00 0.00 1.98
5231 5819 1.346722 CTACCCGTCCCAACCCATATC 59.653 57.143 0.00 0.00 0.00 1.63
5243 5831 0.173708 CTCAGCAAGGACTACCCGTC 59.826 60.000 0.00 0.00 42.07 4.79
5320 5914 7.435192 GTGAATGAAACTTGTAGTCCCAAAAAG 59.565 37.037 0.00 0.00 0.00 2.27
5357 5951 2.727123 TCAAAGCTTCACACCTTCCA 57.273 45.000 0.00 0.00 0.00 3.53
5358 5952 3.632855 CTTCAAAGCTTCACACCTTCC 57.367 47.619 0.00 0.00 0.00 3.46
5368 5962 9.864628 GTCAATGGTGATGATGCTTCAAAGCTT 62.865 40.741 15.24 9.31 43.49 3.74
5369 5963 8.505085 GTCAATGGTGATGATGCTTCAAAGCT 62.505 42.308 15.24 1.93 43.49 3.74
5370 5964 6.410569 GTCAATGGTGATGATGCTTCAAAGC 61.411 44.000 6.36 7.79 43.44 3.51
5371 5965 5.100259 GTCAATGGTGATGATGCTTCAAAG 58.900 41.667 6.36 0.00 35.80 2.77
5372 5966 4.523558 TGTCAATGGTGATGATGCTTCAAA 59.476 37.500 6.36 0.00 35.80 2.69
5373 5967 4.080687 TGTCAATGGTGATGATGCTTCAA 58.919 39.130 6.36 0.00 35.80 2.69
5374 5968 3.688235 TGTCAATGGTGATGATGCTTCA 58.312 40.909 4.57 4.57 35.80 3.02
5375 5969 4.418392 GTTGTCAATGGTGATGATGCTTC 58.582 43.478 0.00 0.00 35.80 3.86
5376 5970 3.119743 CGTTGTCAATGGTGATGATGCTT 60.120 43.478 0.00 0.00 35.80 3.91
5377 5971 2.421073 CGTTGTCAATGGTGATGATGCT 59.579 45.455 0.00 0.00 35.80 3.79
5378 5972 2.478370 CCGTTGTCAATGGTGATGATGC 60.478 50.000 14.81 0.00 35.80 3.91
5379 5973 2.478370 GCCGTTGTCAATGGTGATGATG 60.478 50.000 22.22 0.00 39.84 3.07
5380 5974 1.745087 GCCGTTGTCAATGGTGATGAT 59.255 47.619 22.22 0.00 39.84 2.45
5381 5975 1.164411 GCCGTTGTCAATGGTGATGA 58.836 50.000 22.22 0.00 39.84 2.92
5382 5976 3.700577 GCCGTTGTCAATGGTGATG 57.299 52.632 22.22 0.44 39.84 3.07
5386 5980 3.722295 CGCGCCGTTGTCAATGGT 61.722 61.111 22.22 0.00 39.84 3.55
5387 5981 1.902716 TTACGCGCCGTTGTCAATGG 61.903 55.000 18.17 18.17 41.54 3.16
5388 5982 0.518355 CTTACGCGCCGTTGTCAATG 60.518 55.000 5.73 0.00 41.54 2.82
5389 5983 1.785321 CTTACGCGCCGTTGTCAAT 59.215 52.632 5.73 0.00 41.54 2.57
5390 5984 2.945615 GCTTACGCGCCGTTGTCAA 61.946 57.895 5.73 0.00 41.54 3.18
5391 5985 3.408020 GCTTACGCGCCGTTGTCA 61.408 61.111 5.73 0.00 41.54 3.58
5392 5986 4.143363 GGCTTACGCGCCGTTGTC 62.143 66.667 5.73 0.00 41.54 3.18
5400 5994 1.211709 CCAAAAAGGGGCTTACGCG 59.788 57.895 3.53 3.53 36.88 6.01
5410 6004 4.826556 TGAAACTTGTTGTCCCAAAAAGG 58.173 39.130 10.70 0.00 37.03 3.11
5411 6005 6.593382 TGAATGAAACTTGTTGTCCCAAAAAG 59.407 34.615 5.54 5.54 0.00 2.27
5412 6006 6.370166 GTGAATGAAACTTGTTGTCCCAAAAA 59.630 34.615 0.00 0.00 0.00 1.94
5413 6007 5.872070 GTGAATGAAACTTGTTGTCCCAAAA 59.128 36.000 0.00 0.00 0.00 2.44
5414 6008 5.047021 TGTGAATGAAACTTGTTGTCCCAAA 60.047 36.000 0.00 0.00 0.00 3.28
5415 6009 4.464244 TGTGAATGAAACTTGTTGTCCCAA 59.536 37.500 0.00 0.00 0.00 4.12
5416 6010 4.019858 TGTGAATGAAACTTGTTGTCCCA 58.980 39.130 0.00 0.00 0.00 4.37
5417 6011 4.647424 TGTGAATGAAACTTGTTGTCCC 57.353 40.909 0.00 0.00 0.00 4.46
5418 6012 5.043248 CCTTGTGAATGAAACTTGTTGTCC 58.957 41.667 0.00 0.00 0.00 4.02
5419 6013 5.890334 TCCTTGTGAATGAAACTTGTTGTC 58.110 37.500 0.00 0.00 0.00 3.18
5420 6014 5.913137 TCCTTGTGAATGAAACTTGTTGT 57.087 34.783 0.00 0.00 0.00 3.32
5421 6015 7.775397 ATTTCCTTGTGAATGAAACTTGTTG 57.225 32.000 0.00 0.00 31.41 3.33
5422 6016 8.791327 AAATTTCCTTGTGAATGAAACTTGTT 57.209 26.923 0.00 0.00 31.41 2.83
5423 6017 8.667463 CAAAATTTCCTTGTGAATGAAACTTGT 58.333 29.630 0.00 0.00 31.41 3.16
5424 6018 8.124199 CCAAAATTTCCTTGTGAATGAAACTTG 58.876 33.333 0.00 0.00 31.41 3.16
5425 6019 8.046107 TCCAAAATTTCCTTGTGAATGAAACTT 58.954 29.630 0.00 0.00 31.41 2.66
5426 6020 7.563906 TCCAAAATTTCCTTGTGAATGAAACT 58.436 30.769 0.00 0.00 31.41 2.66
5427 6021 7.784633 TCCAAAATTTCCTTGTGAATGAAAC 57.215 32.000 0.00 0.00 31.41 2.78
5428 6022 7.498570 CCTTCCAAAATTTCCTTGTGAATGAAA 59.501 33.333 0.00 0.00 31.67 2.69
5429 6023 6.991531 CCTTCCAAAATTTCCTTGTGAATGAA 59.008 34.615 0.00 0.00 31.67 2.57
5430 6024 6.099557 ACCTTCCAAAATTTCCTTGTGAATGA 59.900 34.615 0.00 0.00 31.67 2.57
5431 6025 6.203338 CACCTTCCAAAATTTCCTTGTGAATG 59.797 38.462 0.00 0.00 31.67 2.67
5432 6026 6.126796 ACACCTTCCAAAATTTCCTTGTGAAT 60.127 34.615 10.53 0.00 31.67 2.57
5433 6027 5.188751 ACACCTTCCAAAATTTCCTTGTGAA 59.811 36.000 10.53 3.80 0.00 3.18
5434 6028 4.714308 ACACCTTCCAAAATTTCCTTGTGA 59.286 37.500 10.53 0.00 0.00 3.58
5435 6029 4.810491 CACACCTTCCAAAATTTCCTTGTG 59.190 41.667 0.00 0.00 0.00 3.33
5436 6030 4.714308 TCACACCTTCCAAAATTTCCTTGT 59.286 37.500 0.00 0.00 0.00 3.16
5437 6031 5.275067 TCACACCTTCCAAAATTTCCTTG 57.725 39.130 0.00 0.00 0.00 3.61
5438 6032 5.684813 GCTTCACACCTTCCAAAATTTCCTT 60.685 40.000 0.00 0.00 0.00 3.36
5439 6033 4.202253 GCTTCACACCTTCCAAAATTTCCT 60.202 41.667 0.00 0.00 0.00 3.36
5440 6034 4.058124 GCTTCACACCTTCCAAAATTTCC 58.942 43.478 0.00 0.00 0.00 3.13
5441 6035 4.948847 AGCTTCACACCTTCCAAAATTTC 58.051 39.130 0.00 0.00 0.00 2.17
5442 6036 5.357742 AAGCTTCACACCTTCCAAAATTT 57.642 34.783 0.00 0.00 0.00 1.82
5443 6037 5.104982 TCAAAGCTTCACACCTTCCAAAATT 60.105 36.000 0.00 0.00 0.00 1.82
5444 6038 4.405358 TCAAAGCTTCACACCTTCCAAAAT 59.595 37.500 0.00 0.00 0.00 1.82
5445 6039 3.766591 TCAAAGCTTCACACCTTCCAAAA 59.233 39.130 0.00 0.00 0.00 2.44
5446 6040 3.360867 TCAAAGCTTCACACCTTCCAAA 58.639 40.909 0.00 0.00 0.00 3.28
5447 6041 3.011566 TCAAAGCTTCACACCTTCCAA 57.988 42.857 0.00 0.00 0.00 3.53
5479 6073 2.631267 TGTCAATGGTGATGATGGTCG 58.369 47.619 0.00 0.00 35.80 4.79
5542 6156 4.590850 AGCTTCACACCTTCCATTTTTC 57.409 40.909 0.00 0.00 0.00 2.29
5569 6183 3.713902 AATCCACGCATCATCCTCC 57.286 52.632 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.