Multiple sequence alignment - TraesCS3A01G135900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G135900 chr3A 100.000 2288 0 0 1 2288 113367070 113364783 0.000000e+00 4226
1 TraesCS3A01G135900 chr3A 85.289 1747 167 49 8 1683 418765665 418763938 0.000000e+00 1720
2 TraesCS3A01G135900 chr3A 90.745 1221 69 18 493 1683 624176981 624178187 0.000000e+00 1589
3 TraesCS3A01G135900 chr3D 95.241 1702 55 8 1 1683 479622720 479624414 0.000000e+00 2671
4 TraesCS3A01G135900 chr7D 94.974 1711 59 9 1 1686 98406307 98404599 0.000000e+00 2658
5 TraesCS3A01G135900 chr7D 95.475 442 19 1 1848 2288 553425217 553425658 0.000000e+00 704
6 TraesCS3A01G135900 chr4D 94.734 1709 56 10 1 1685 504270332 504272030 0.000000e+00 2627
7 TraesCS3A01G135900 chr4D 94.318 1707 62 16 6 1685 466289367 466291065 0.000000e+00 2582
8 TraesCS3A01G135900 chr2A 94.412 1700 72 6 6 1683 165347572 165345874 0.000000e+00 2591
9 TraesCS3A01G135900 chr2A 93.743 1710 75 12 6 1687 68890357 68888652 0.000000e+00 2536
10 TraesCS3A01G135900 chr6A 93.443 1708 85 11 1 1684 479912668 479910964 0.000000e+00 2508
11 TraesCS3A01G135900 chr6A 97.732 441 10 0 1848 2288 588945741 588945301 0.000000e+00 760
12 TraesCS3A01G135900 chr4A 93.326 1708 87 7 1 1683 619180417 619182122 0.000000e+00 2497
13 TraesCS3A01G135900 chr4A 98.186 441 8 0 1848 2288 211052284 211051844 0.000000e+00 771
14 TraesCS3A01G135900 chr4A 95.928 442 16 2 1848 2288 617961507 617961947 0.000000e+00 715
15 TraesCS3A01G135900 chr7A 93.310 1689 89 13 13 1684 680904168 680902487 0.000000e+00 2471
16 TraesCS3A01G135900 chr5D 92.588 1727 68 13 1 1687 424049064 424047358 0.000000e+00 2425
17 TraesCS3A01G135900 chr2B 91.119 1734 97 24 1 1690 643125125 643126845 0.000000e+00 2296
18 TraesCS3A01G135900 chr2B 95.023 442 22 0 1847 2288 755601041 755600600 0.000000e+00 695
19 TraesCS3A01G135900 chr5A 98.182 440 7 1 1849 2288 617624437 617623999 0.000000e+00 767
20 TraesCS3A01G135900 chr5A 97.285 442 12 0 1847 2288 15419815 15420256 0.000000e+00 750
21 TraesCS3A01G135900 chr1B 95.475 442 19 1 1848 2288 57535777 57536218 0.000000e+00 704
22 TraesCS3A01G135900 chr4B 95.045 444 21 1 1846 2288 26838508 26838065 0.000000e+00 697
23 TraesCS3A01G135900 chr3B 90.683 483 30 2 1 483 79286376 79286843 1.490000e-176 628


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G135900 chr3A 113364783 113367070 2287 True 4226 4226 100.000 1 2288 1 chr3A.!!$R1 2287
1 TraesCS3A01G135900 chr3A 418763938 418765665 1727 True 1720 1720 85.289 8 1683 1 chr3A.!!$R2 1675
2 TraesCS3A01G135900 chr3A 624176981 624178187 1206 False 1589 1589 90.745 493 1683 1 chr3A.!!$F1 1190
3 TraesCS3A01G135900 chr3D 479622720 479624414 1694 False 2671 2671 95.241 1 1683 1 chr3D.!!$F1 1682
4 TraesCS3A01G135900 chr7D 98404599 98406307 1708 True 2658 2658 94.974 1 1686 1 chr7D.!!$R1 1685
5 TraesCS3A01G135900 chr4D 504270332 504272030 1698 False 2627 2627 94.734 1 1685 1 chr4D.!!$F2 1684
6 TraesCS3A01G135900 chr4D 466289367 466291065 1698 False 2582 2582 94.318 6 1685 1 chr4D.!!$F1 1679
7 TraesCS3A01G135900 chr2A 165345874 165347572 1698 True 2591 2591 94.412 6 1683 1 chr2A.!!$R2 1677
8 TraesCS3A01G135900 chr2A 68888652 68890357 1705 True 2536 2536 93.743 6 1687 1 chr2A.!!$R1 1681
9 TraesCS3A01G135900 chr6A 479910964 479912668 1704 True 2508 2508 93.443 1 1684 1 chr6A.!!$R1 1683
10 TraesCS3A01G135900 chr4A 619180417 619182122 1705 False 2497 2497 93.326 1 1683 1 chr4A.!!$F2 1682
11 TraesCS3A01G135900 chr7A 680902487 680904168 1681 True 2471 2471 93.310 13 1684 1 chr7A.!!$R1 1671
12 TraesCS3A01G135900 chr5D 424047358 424049064 1706 True 2425 2425 92.588 1 1687 1 chr5D.!!$R1 1686
13 TraesCS3A01G135900 chr2B 643125125 643126845 1720 False 2296 2296 91.119 1 1690 1 chr2B.!!$F1 1689

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
183 190 0.931757 TCCTCCTCCTTAGGCTCCCT 60.932 60.0 0.0 0.0 43.31 4.2 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2122 2230 0.035458 GGCTAGATTGGTGGATCGGG 59.965 60.0 0.0 0.0 0.0 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
183 190 0.931757 TCCTCCTCCTTAGGCTCCCT 60.932 60.000 0.00 0.00 43.31 4.20
251 258 2.797278 CGGCGGTCATTAGGAGCCT 61.797 63.158 0.00 0.00 45.16 4.58
271 278 4.277921 GCCTAGTAGGTCTTATACTTGCGT 59.722 45.833 17.69 0.00 37.80 5.24
343 350 2.793585 GCGAATGATGTCAACTGCCATG 60.794 50.000 0.00 0.00 0.00 3.66
664 673 4.311208 AAATATAGGGGGTGGAGAGGAA 57.689 45.455 0.00 0.00 0.00 3.36
897 938 4.899239 CGACGAGGGCATGGAGGC 62.899 72.222 0.00 0.00 43.27 4.70
1173 1220 4.021981 CAGATCAAGATCGGCTACATGGTA 60.022 45.833 0.00 0.00 42.48 3.25
1431 1519 1.097232 GCTTATGATGTGTGCTGCCA 58.903 50.000 0.00 0.00 0.00 4.92
1524 1612 0.847373 TGCCTTGGGTTTGTGGACTA 59.153 50.000 0.00 0.00 0.00 2.59
1685 1793 1.579429 GCAACCAAACACGCCCTAG 59.421 57.895 0.00 0.00 0.00 3.02
1690 1798 1.338769 ACCAAACACGCCCTAGATGAC 60.339 52.381 0.00 0.00 0.00 3.06
1691 1799 1.369625 CAAACACGCCCTAGATGACC 58.630 55.000 0.00 0.00 0.00 4.02
1692 1800 0.108329 AAACACGCCCTAGATGACCG 60.108 55.000 0.00 0.00 0.00 4.79
1693 1801 1.255667 AACACGCCCTAGATGACCGT 61.256 55.000 0.00 0.00 0.00 4.83
1694 1802 1.255667 ACACGCCCTAGATGACCGTT 61.256 55.000 0.00 0.00 0.00 4.44
1695 1803 0.806102 CACGCCCTAGATGACCGTTG 60.806 60.000 0.00 0.00 0.00 4.10
1696 1804 1.255667 ACGCCCTAGATGACCGTTGT 61.256 55.000 0.00 0.00 0.00 3.32
1697 1805 0.527817 CGCCCTAGATGACCGTTGTC 60.528 60.000 0.00 0.00 42.12 3.18
1698 1806 0.179081 GCCCTAGATGACCGTTGTCC 60.179 60.000 0.00 0.00 41.01 4.02
1699 1807 1.191535 CCCTAGATGACCGTTGTCCA 58.808 55.000 0.00 0.00 41.01 4.02
1700 1808 1.762957 CCCTAGATGACCGTTGTCCAT 59.237 52.381 0.00 0.00 41.01 3.41
1701 1809 2.483714 CCCTAGATGACCGTTGTCCATG 60.484 54.545 0.00 0.00 41.01 3.66
1702 1810 2.483714 CCTAGATGACCGTTGTCCATGG 60.484 54.545 4.97 4.97 41.01 3.66
1704 1812 1.351017 AGATGACCGTTGTCCATGGTT 59.649 47.619 12.58 0.00 45.89 3.67
1705 1813 2.159382 GATGACCGTTGTCCATGGTTT 58.841 47.619 12.58 0.00 45.89 3.27
1706 1814 2.932855 TGACCGTTGTCCATGGTTTA 57.067 45.000 12.58 0.00 45.89 2.01
1707 1815 3.210232 TGACCGTTGTCCATGGTTTAA 57.790 42.857 12.58 2.82 45.89 1.52
1708 1816 2.879646 TGACCGTTGTCCATGGTTTAAC 59.120 45.455 12.58 13.75 45.89 2.01
1709 1817 3.143728 GACCGTTGTCCATGGTTTAACT 58.856 45.455 12.58 1.44 45.89 2.24
1710 1818 2.882137 ACCGTTGTCCATGGTTTAACTG 59.118 45.455 12.58 13.33 42.98 3.16
1711 1819 3.142951 CCGTTGTCCATGGTTTAACTGA 58.857 45.455 12.58 0.00 0.00 3.41
1712 1820 3.058501 CCGTTGTCCATGGTTTAACTGAC 60.059 47.826 12.58 0.00 0.00 3.51
1713 1821 3.813166 CGTTGTCCATGGTTTAACTGACT 59.187 43.478 12.58 0.00 0.00 3.41
1714 1822 4.084013 CGTTGTCCATGGTTTAACTGACTC 60.084 45.833 12.58 0.00 0.00 3.36
1715 1823 4.698201 TGTCCATGGTTTAACTGACTCA 57.302 40.909 12.58 0.00 0.00 3.41
1716 1824 4.641396 TGTCCATGGTTTAACTGACTCAG 58.359 43.478 12.58 4.36 37.52 3.35
1717 1825 3.437049 GTCCATGGTTTAACTGACTCAGC 59.563 47.826 12.58 0.00 34.37 4.26
1718 1826 3.072330 TCCATGGTTTAACTGACTCAGCA 59.928 43.478 12.58 0.00 34.37 4.41
1719 1827 3.820467 CCATGGTTTAACTGACTCAGCAA 59.180 43.478 2.57 0.00 34.37 3.91
1720 1828 4.083110 CCATGGTTTAACTGACTCAGCAAG 60.083 45.833 2.57 0.00 34.37 4.01
1721 1829 2.878406 TGGTTTAACTGACTCAGCAAGC 59.122 45.455 5.92 7.10 34.37 4.01
1722 1830 3.142174 GGTTTAACTGACTCAGCAAGCT 58.858 45.455 5.92 0.00 34.37 3.74
1723 1831 3.565902 GGTTTAACTGACTCAGCAAGCTT 59.434 43.478 5.92 0.00 34.37 3.74
1724 1832 4.531332 GTTTAACTGACTCAGCAAGCTTG 58.469 43.478 22.44 22.44 34.37 4.01
1725 1833 1.602311 AACTGACTCAGCAAGCTTGG 58.398 50.000 27.10 13.18 34.37 3.61
1726 1834 0.761187 ACTGACTCAGCAAGCTTGGA 59.239 50.000 27.10 15.72 34.37 3.53
1727 1835 1.141657 ACTGACTCAGCAAGCTTGGAA 59.858 47.619 27.10 2.48 34.37 3.53
1728 1836 1.805345 CTGACTCAGCAAGCTTGGAAG 59.195 52.381 27.10 12.65 0.00 3.46
1740 1848 1.250328 CTTGGAAGCATTGGTCTGCA 58.750 50.000 0.00 0.00 44.77 4.41
1741 1849 1.201647 CTTGGAAGCATTGGTCTGCAG 59.798 52.381 7.63 7.63 44.77 4.41
1742 1850 0.609957 TGGAAGCATTGGTCTGCAGG 60.610 55.000 15.13 0.00 44.77 4.85
1743 1851 1.318158 GGAAGCATTGGTCTGCAGGG 61.318 60.000 15.13 0.00 44.77 4.45
1744 1852 0.322816 GAAGCATTGGTCTGCAGGGA 60.323 55.000 15.13 0.00 44.77 4.20
1745 1853 0.112995 AAGCATTGGTCTGCAGGGAA 59.887 50.000 15.13 4.65 44.77 3.97
1746 1854 0.323178 AGCATTGGTCTGCAGGGAAG 60.323 55.000 15.13 0.71 44.77 3.46
1747 1855 1.941999 GCATTGGTCTGCAGGGAAGC 61.942 60.000 15.13 4.91 41.87 3.86
1748 1856 0.323178 CATTGGTCTGCAGGGAAGCT 60.323 55.000 15.13 0.00 34.99 3.74
1749 1857 0.407139 ATTGGTCTGCAGGGAAGCTT 59.593 50.000 15.13 0.00 34.99 3.74
1750 1858 0.185901 TTGGTCTGCAGGGAAGCTTT 59.814 50.000 15.13 0.00 34.99 3.51
1751 1859 1.064003 TGGTCTGCAGGGAAGCTTTA 58.936 50.000 15.13 0.00 34.99 1.85
1752 1860 1.635487 TGGTCTGCAGGGAAGCTTTAT 59.365 47.619 15.13 0.00 34.99 1.40
1753 1861 2.293170 GGTCTGCAGGGAAGCTTTATC 58.707 52.381 15.13 0.00 34.99 1.75
1754 1862 2.092699 GGTCTGCAGGGAAGCTTTATCT 60.093 50.000 15.13 0.00 34.99 1.98
1755 1863 3.202097 GTCTGCAGGGAAGCTTTATCTC 58.798 50.000 15.13 0.00 34.99 2.75
1756 1864 3.110705 TCTGCAGGGAAGCTTTATCTCT 58.889 45.455 15.13 0.00 34.99 3.10
1757 1865 3.133721 TCTGCAGGGAAGCTTTATCTCTC 59.866 47.826 15.13 0.00 34.99 3.20
1758 1866 2.159043 TGCAGGGAAGCTTTATCTCTCG 60.159 50.000 0.00 0.00 34.99 4.04
1759 1867 2.478831 CAGGGAAGCTTTATCTCTCGC 58.521 52.381 0.00 0.00 0.00 5.03
1760 1868 2.102252 CAGGGAAGCTTTATCTCTCGCT 59.898 50.000 0.00 0.00 0.00 4.93
1761 1869 2.769095 AGGGAAGCTTTATCTCTCGCTT 59.231 45.455 0.00 0.00 44.61 4.68
1762 1870 2.869192 GGGAAGCTTTATCTCTCGCTTG 59.131 50.000 0.00 0.00 42.25 4.01
1763 1871 3.526534 GGAAGCTTTATCTCTCGCTTGT 58.473 45.455 0.00 0.00 42.25 3.16
1764 1872 3.308323 GGAAGCTTTATCTCTCGCTTGTG 59.692 47.826 0.00 0.00 42.25 3.33
1765 1873 3.876274 AGCTTTATCTCTCGCTTGTGA 57.124 42.857 0.00 0.00 0.00 3.58
1766 1874 3.516615 AGCTTTATCTCTCGCTTGTGAC 58.483 45.455 0.00 0.00 0.00 3.67
1767 1875 2.605366 GCTTTATCTCTCGCTTGTGACC 59.395 50.000 0.00 0.00 0.00 4.02
1768 1876 3.677424 GCTTTATCTCTCGCTTGTGACCT 60.677 47.826 0.00 0.00 0.00 3.85
1769 1877 3.784701 TTATCTCTCGCTTGTGACCTC 57.215 47.619 0.00 0.00 0.00 3.85
1770 1878 0.820871 ATCTCTCGCTTGTGACCTCC 59.179 55.000 0.00 0.00 0.00 4.30
1771 1879 0.539669 TCTCTCGCTTGTGACCTCCA 60.540 55.000 0.00 0.00 0.00 3.86
1772 1880 0.389166 CTCTCGCTTGTGACCTCCAC 60.389 60.000 0.00 0.00 45.88 4.02
1773 1881 0.827925 TCTCGCTTGTGACCTCCACT 60.828 55.000 0.00 0.00 45.86 4.00
1774 1882 0.888619 CTCGCTTGTGACCTCCACTA 59.111 55.000 0.00 0.00 45.86 2.74
1775 1883 0.601558 TCGCTTGTGACCTCCACTAC 59.398 55.000 0.00 0.00 45.86 2.73
1776 1884 0.603569 CGCTTGTGACCTCCACTACT 59.396 55.000 0.00 0.00 45.86 2.57
1777 1885 1.402984 CGCTTGTGACCTCCACTACTC 60.403 57.143 0.00 0.00 45.86 2.59
1778 1886 1.896465 GCTTGTGACCTCCACTACTCT 59.104 52.381 0.00 0.00 45.86 3.24
1779 1887 2.353208 GCTTGTGACCTCCACTACTCTG 60.353 54.545 0.00 0.00 45.86 3.35
1780 1888 2.677542 TGTGACCTCCACTACTCTGT 57.322 50.000 0.00 0.00 45.86 3.41
1781 1889 2.239400 TGTGACCTCCACTACTCTGTG 58.761 52.381 0.00 0.00 45.86 3.66
1782 1890 1.067495 GTGACCTCCACTACTCTGTGC 60.067 57.143 0.00 0.00 42.44 4.57
1783 1891 1.203063 TGACCTCCACTACTCTGTGCT 60.203 52.381 0.00 0.00 36.68 4.40
1784 1892 1.474879 GACCTCCACTACTCTGTGCTC 59.525 57.143 0.00 0.00 36.68 4.26
1785 1893 0.820871 CCTCCACTACTCTGTGCTCC 59.179 60.000 0.00 0.00 36.68 4.70
1786 1894 1.550327 CTCCACTACTCTGTGCTCCA 58.450 55.000 0.00 0.00 36.68 3.86
1787 1895 1.476085 CTCCACTACTCTGTGCTCCAG 59.524 57.143 0.00 0.00 42.97 3.86
1788 1896 0.534412 CCACTACTCTGTGCTCCAGG 59.466 60.000 4.47 0.00 41.83 4.45
1789 1897 1.261480 CACTACTCTGTGCTCCAGGT 58.739 55.000 4.47 4.49 41.83 4.00
1790 1898 2.447443 CACTACTCTGTGCTCCAGGTA 58.553 52.381 4.47 5.22 41.83 3.08
1791 1899 2.425312 CACTACTCTGTGCTCCAGGTAG 59.575 54.545 19.03 19.03 43.41 3.18
1792 1900 2.041891 ACTACTCTGTGCTCCAGGTAGT 59.958 50.000 19.78 19.78 44.51 2.73
1793 1901 1.551452 ACTCTGTGCTCCAGGTAGTC 58.449 55.000 4.47 0.00 41.83 2.59
1794 1902 1.203063 ACTCTGTGCTCCAGGTAGTCA 60.203 52.381 4.47 0.00 41.83 3.41
1795 1903 1.895798 CTCTGTGCTCCAGGTAGTCAA 59.104 52.381 4.47 0.00 41.83 3.18
1796 1904 2.300152 CTCTGTGCTCCAGGTAGTCAAA 59.700 50.000 4.47 0.00 41.83 2.69
1797 1905 2.037251 TCTGTGCTCCAGGTAGTCAAAC 59.963 50.000 4.47 0.00 41.83 2.93
1798 1906 1.765904 TGTGCTCCAGGTAGTCAAACA 59.234 47.619 0.00 0.00 0.00 2.83
1799 1907 2.371841 TGTGCTCCAGGTAGTCAAACAT 59.628 45.455 0.00 0.00 0.00 2.71
1800 1908 2.744202 GTGCTCCAGGTAGTCAAACATG 59.256 50.000 0.00 0.00 0.00 3.21
1801 1909 2.371841 TGCTCCAGGTAGTCAAACATGT 59.628 45.455 0.00 0.00 29.31 3.21
1802 1910 3.181445 TGCTCCAGGTAGTCAAACATGTT 60.181 43.478 4.92 4.92 29.31 2.71
1803 1911 3.821033 GCTCCAGGTAGTCAAACATGTTT 59.179 43.478 18.13 18.13 29.31 2.83
1814 1922 2.865551 CAAACATGTTTGGCTGTTGTCC 59.134 45.455 34.07 0.00 44.47 4.02
1815 1923 1.774110 ACATGTTTGGCTGTTGTCCA 58.226 45.000 0.00 0.00 0.00 4.02
1816 1924 1.682854 ACATGTTTGGCTGTTGTCCAG 59.317 47.619 0.00 0.00 44.53 3.86
1817 1925 1.955778 CATGTTTGGCTGTTGTCCAGA 59.044 47.619 0.00 0.00 44.49 3.86
1818 1926 2.363306 TGTTTGGCTGTTGTCCAGAT 57.637 45.000 0.00 0.00 44.49 2.90
1819 1927 2.665165 TGTTTGGCTGTTGTCCAGATT 58.335 42.857 0.00 0.00 44.49 2.40
1820 1928 2.361757 TGTTTGGCTGTTGTCCAGATTG 59.638 45.455 0.00 0.00 44.49 2.67
1821 1929 2.362077 GTTTGGCTGTTGTCCAGATTGT 59.638 45.455 0.00 0.00 44.49 2.71
1822 1930 1.896220 TGGCTGTTGTCCAGATTGTC 58.104 50.000 0.00 0.00 44.49 3.18
1823 1931 0.798776 GGCTGTTGTCCAGATTGTCG 59.201 55.000 0.00 0.00 44.49 4.35
1824 1932 0.798776 GCTGTTGTCCAGATTGTCGG 59.201 55.000 0.00 0.00 44.49 4.79
1825 1933 1.442769 CTGTTGTCCAGATTGTCGGG 58.557 55.000 0.00 0.00 44.49 5.14
1826 1934 1.001974 CTGTTGTCCAGATTGTCGGGA 59.998 52.381 0.00 0.00 44.49 5.14
1827 1935 1.418264 TGTTGTCCAGATTGTCGGGAA 59.582 47.619 0.39 0.00 42.23 3.97
1828 1936 2.076863 GTTGTCCAGATTGTCGGGAAG 58.923 52.381 0.39 0.00 42.23 3.46
1829 1937 1.639722 TGTCCAGATTGTCGGGAAGA 58.360 50.000 0.39 0.00 42.23 2.87
1830 1938 1.550524 TGTCCAGATTGTCGGGAAGAG 59.449 52.381 0.39 0.00 42.23 2.85
1831 1939 1.825474 GTCCAGATTGTCGGGAAGAGA 59.175 52.381 0.39 0.00 42.23 3.10
1832 1940 2.233922 GTCCAGATTGTCGGGAAGAGAA 59.766 50.000 0.39 0.00 42.23 2.87
1833 1941 2.903784 TCCAGATTGTCGGGAAGAGAAA 59.096 45.455 0.00 0.00 37.80 2.52
1834 1942 3.519510 TCCAGATTGTCGGGAAGAGAAAT 59.480 43.478 0.00 0.00 37.80 2.17
1835 1943 3.873952 CCAGATTGTCGGGAAGAGAAATC 59.126 47.826 0.00 0.00 35.66 2.17
1836 1944 4.507710 CAGATTGTCGGGAAGAGAAATCA 58.492 43.478 0.00 0.00 35.66 2.57
1837 1945 5.121811 CAGATTGTCGGGAAGAGAAATCAT 58.878 41.667 0.00 0.00 35.66 2.45
1838 1946 5.007430 CAGATTGTCGGGAAGAGAAATCATG 59.993 44.000 0.00 0.00 35.66 3.07
1839 1947 3.981071 TGTCGGGAAGAGAAATCATGT 57.019 42.857 0.00 0.00 0.00 3.21
1840 1948 3.599343 TGTCGGGAAGAGAAATCATGTG 58.401 45.455 0.00 0.00 0.00 3.21
1841 1949 3.007940 TGTCGGGAAGAGAAATCATGTGT 59.992 43.478 0.00 0.00 0.00 3.72
1842 1950 4.221924 TGTCGGGAAGAGAAATCATGTGTA 59.778 41.667 0.00 0.00 0.00 2.90
1843 1951 5.104941 TGTCGGGAAGAGAAATCATGTGTAT 60.105 40.000 0.00 0.00 0.00 2.29
1844 1952 6.097696 TGTCGGGAAGAGAAATCATGTGTATA 59.902 38.462 0.00 0.00 0.00 1.47
1845 1953 6.421202 GTCGGGAAGAGAAATCATGTGTATAC 59.579 42.308 0.00 0.00 0.00 1.47
1846 1954 6.097696 TCGGGAAGAGAAATCATGTGTATACA 59.902 38.462 0.08 0.08 41.89 2.29
1847 1955 6.201044 CGGGAAGAGAAATCATGTGTATACAC 59.799 42.308 25.99 25.99 46.59 2.90
1869 1977 8.633075 ACACACTACAAGAAATTTGTTCATTG 57.367 30.769 0.00 0.00 34.11 2.82
1870 1978 8.250332 ACACACTACAAGAAATTTGTTCATTGT 58.750 29.630 0.00 0.00 35.28 2.71
1871 1979 9.086336 CACACTACAAGAAATTTGTTCATTGTT 57.914 29.630 0.00 0.00 33.31 2.83
1872 1980 9.086336 ACACTACAAGAAATTTGTTCATTGTTG 57.914 29.630 0.00 0.00 33.31 3.33
1873 1981 9.299963 CACTACAAGAAATTTGTTCATTGTTGA 57.700 29.630 0.00 0.00 33.31 3.18
1874 1982 9.301153 ACTACAAGAAATTTGTTCATTGTTGAC 57.699 29.630 0.00 0.00 33.31 3.18
1875 1983 7.538303 ACAAGAAATTTGTTCATTGTTGACC 57.462 32.000 0.00 0.00 0.00 4.02
1876 1984 6.538381 ACAAGAAATTTGTTCATTGTTGACCC 59.462 34.615 0.00 0.00 0.00 4.46
1877 1985 6.484364 AGAAATTTGTTCATTGTTGACCCT 57.516 33.333 0.00 0.00 0.00 4.34
1878 1986 6.515832 AGAAATTTGTTCATTGTTGACCCTC 58.484 36.000 0.00 0.00 0.00 4.30
1879 1987 4.871933 ATTTGTTCATTGTTGACCCTCC 57.128 40.909 0.00 0.00 0.00 4.30
1880 1988 3.304911 TTGTTCATTGTTGACCCTCCA 57.695 42.857 0.00 0.00 0.00 3.86
1881 1989 3.524095 TGTTCATTGTTGACCCTCCAT 57.476 42.857 0.00 0.00 0.00 3.41
1882 1990 3.843422 TGTTCATTGTTGACCCTCCATT 58.157 40.909 0.00 0.00 0.00 3.16
1883 1991 4.222336 TGTTCATTGTTGACCCTCCATTT 58.778 39.130 0.00 0.00 0.00 2.32
1884 1992 4.653341 TGTTCATTGTTGACCCTCCATTTT 59.347 37.500 0.00 0.00 0.00 1.82
1885 1993 4.870123 TCATTGTTGACCCTCCATTTTG 57.130 40.909 0.00 0.00 0.00 2.44
1886 1994 3.577848 TCATTGTTGACCCTCCATTTTGG 59.422 43.478 0.00 0.00 39.43 3.28
1887 1995 2.765689 TGTTGACCCTCCATTTTGGT 57.234 45.000 0.00 0.00 39.03 3.67
1891 1999 2.586648 GACCCTCCATTTTGGTCACT 57.413 50.000 3.14 0.00 46.29 3.41
1892 2000 2.162681 GACCCTCCATTTTGGTCACTG 58.837 52.381 3.14 0.00 46.29 3.66
1893 2001 1.780309 ACCCTCCATTTTGGTCACTGA 59.220 47.619 0.00 0.00 39.03 3.41
1894 2002 2.176798 ACCCTCCATTTTGGTCACTGAA 59.823 45.455 0.00 0.00 39.03 3.02
1895 2003 3.181418 ACCCTCCATTTTGGTCACTGAAT 60.181 43.478 0.00 0.00 39.03 2.57
1896 2004 3.445096 CCCTCCATTTTGGTCACTGAATC 59.555 47.826 0.00 0.00 39.03 2.52
1897 2005 3.127548 CCTCCATTTTGGTCACTGAATCG 59.872 47.826 0.00 0.00 39.03 3.34
1898 2006 3.750371 TCCATTTTGGTCACTGAATCGT 58.250 40.909 0.00 0.00 39.03 3.73
1899 2007 3.751175 TCCATTTTGGTCACTGAATCGTC 59.249 43.478 0.00 0.00 39.03 4.20
1900 2008 3.501828 CCATTTTGGTCACTGAATCGTCA 59.498 43.478 0.00 0.00 31.35 4.35
1901 2009 4.156556 CCATTTTGGTCACTGAATCGTCAT 59.843 41.667 0.00 0.00 29.96 3.06
1902 2010 5.335897 CCATTTTGGTCACTGAATCGTCATT 60.336 40.000 0.00 0.00 29.96 2.57
1903 2011 6.128035 CCATTTTGGTCACTGAATCGTCATTA 60.128 38.462 0.00 0.00 29.96 1.90
1904 2012 7.415541 CCATTTTGGTCACTGAATCGTCATTAT 60.416 37.037 0.00 0.00 29.96 1.28
1905 2013 7.447374 TTTTGGTCACTGAATCGTCATTATT 57.553 32.000 0.00 0.00 31.85 1.40
1906 2014 6.662414 TTGGTCACTGAATCGTCATTATTC 57.338 37.500 0.00 0.00 34.55 1.75
1907 2015 5.729510 TGGTCACTGAATCGTCATTATTCA 58.270 37.500 0.00 0.00 40.21 2.57
1908 2016 6.348498 TGGTCACTGAATCGTCATTATTCAT 58.652 36.000 0.00 0.00 41.28 2.57
1909 2017 6.258507 TGGTCACTGAATCGTCATTATTCATG 59.741 38.462 0.00 0.00 41.28 3.07
1910 2018 6.258727 GGTCACTGAATCGTCATTATTCATGT 59.741 38.462 0.00 0.00 41.28 3.21
1911 2019 7.201644 GGTCACTGAATCGTCATTATTCATGTT 60.202 37.037 0.00 0.00 41.28 2.71
1912 2020 8.177663 GTCACTGAATCGTCATTATTCATGTTT 58.822 33.333 0.00 0.00 41.28 2.83
1913 2021 8.729756 TCACTGAATCGTCATTATTCATGTTTT 58.270 29.630 0.00 0.00 41.28 2.43
1914 2022 9.986833 CACTGAATCGTCATTATTCATGTTTTA 57.013 29.630 0.00 0.00 41.28 1.52
1919 2027 9.950680 AATCGTCATTATTCATGTTTTATGACC 57.049 29.630 18.70 8.85 38.93 4.02
1920 2028 8.731275 TCGTCATTATTCATGTTTTATGACCT 57.269 30.769 18.70 0.00 38.93 3.85
1921 2029 9.173021 TCGTCATTATTCATGTTTTATGACCTT 57.827 29.630 18.70 0.00 38.93 3.50
1922 2030 9.225201 CGTCATTATTCATGTTTTATGACCTTG 57.775 33.333 18.70 8.82 38.93 3.61
1929 2037 8.641499 TTCATGTTTTATGACCTTGTTTTGAC 57.359 30.769 0.00 0.00 0.00 3.18
1930 2038 7.206687 TCATGTTTTATGACCTTGTTTTGACC 58.793 34.615 0.00 0.00 0.00 4.02
1931 2039 6.531503 TGTTTTATGACCTTGTTTTGACCA 57.468 33.333 0.00 0.00 0.00 4.02
1932 2040 6.936279 TGTTTTATGACCTTGTTTTGACCAA 58.064 32.000 0.00 0.00 0.00 3.67
1933 2041 7.386851 TGTTTTATGACCTTGTTTTGACCAAA 58.613 30.769 0.00 0.00 0.00 3.28
1934 2042 8.043710 TGTTTTATGACCTTGTTTTGACCAAAT 58.956 29.630 0.00 0.00 0.00 2.32
1935 2043 8.888716 GTTTTATGACCTTGTTTTGACCAAATT 58.111 29.630 0.00 0.00 0.00 1.82
1936 2044 8.655651 TTTATGACCTTGTTTTGACCAAATTC 57.344 30.769 0.00 0.00 0.00 2.17
1937 2045 5.667539 TGACCTTGTTTTGACCAAATTCA 57.332 34.783 0.00 0.00 0.00 2.57
1938 2046 6.042638 TGACCTTGTTTTGACCAAATTCAA 57.957 33.333 0.00 5.18 33.55 2.69
1939 2047 6.467677 TGACCTTGTTTTGACCAAATTCAAA 58.532 32.000 11.53 0.00 42.47 2.69
1950 2058 5.675684 ACCAAATTCAAAAGGTCAACAGT 57.324 34.783 0.00 0.00 0.00 3.55
1951 2059 6.048732 ACCAAATTCAAAAGGTCAACAGTT 57.951 33.333 0.00 0.00 0.00 3.16
1952 2060 5.874261 ACCAAATTCAAAAGGTCAACAGTTG 59.126 36.000 6.99 6.99 0.00 3.16
1953 2061 5.294060 CCAAATTCAAAAGGTCAACAGTTGG 59.706 40.000 13.52 0.00 0.00 3.77
1954 2062 3.518634 TTCAAAAGGTCAACAGTTGGC 57.481 42.857 13.52 11.63 33.62 4.52
1958 2066 3.340789 GGTCAACAGTTGGCCGTC 58.659 61.111 21.19 0.00 46.80 4.79
1959 2067 1.525077 GGTCAACAGTTGGCCGTCA 60.525 57.895 21.19 0.00 46.80 4.35
1960 2068 1.098712 GGTCAACAGTTGGCCGTCAA 61.099 55.000 21.19 0.00 46.80 3.18
1961 2069 0.307760 GTCAACAGTTGGCCGTCAAG 59.692 55.000 13.52 0.00 35.80 3.02
1962 2070 0.179234 TCAACAGTTGGCCGTCAAGA 59.821 50.000 13.52 0.00 35.80 3.02
1963 2071 1.021202 CAACAGTTGGCCGTCAAGAA 58.979 50.000 5.25 0.00 35.80 2.52
1964 2072 1.021968 AACAGTTGGCCGTCAAGAAC 58.978 50.000 0.00 0.00 35.80 3.01
1965 2073 0.107410 ACAGTTGGCCGTCAAGAACA 60.107 50.000 0.00 0.00 35.80 3.18
1966 2074 1.021202 CAGTTGGCCGTCAAGAACAA 58.979 50.000 0.00 0.00 35.80 2.83
1967 2075 1.403679 CAGTTGGCCGTCAAGAACAAA 59.596 47.619 0.00 0.00 35.80 2.83
1968 2076 1.404035 AGTTGGCCGTCAAGAACAAAC 59.596 47.619 0.00 0.00 35.80 2.93
1969 2077 1.133407 GTTGGCCGTCAAGAACAAACA 59.867 47.619 0.00 0.00 35.80 2.83
1970 2078 1.464734 TGGCCGTCAAGAACAAACAA 58.535 45.000 0.00 0.00 0.00 2.83
1971 2079 1.819288 TGGCCGTCAAGAACAAACAAA 59.181 42.857 0.00 0.00 0.00 2.83
1972 2080 2.190161 GGCCGTCAAGAACAAACAAAC 58.810 47.619 0.00 0.00 0.00 2.93
1973 2081 2.416162 GGCCGTCAAGAACAAACAAACA 60.416 45.455 0.00 0.00 0.00 2.83
1974 2082 3.443976 GCCGTCAAGAACAAACAAACAT 58.556 40.909 0.00 0.00 0.00 2.71
1975 2083 3.242712 GCCGTCAAGAACAAACAAACATG 59.757 43.478 0.00 0.00 0.00 3.21
1976 2084 4.667262 CCGTCAAGAACAAACAAACATGA 58.333 39.130 0.00 0.00 0.00 3.07
1977 2085 4.499040 CCGTCAAGAACAAACAAACATGAC 59.501 41.667 0.00 0.00 34.19 3.06
1978 2086 4.499040 CGTCAAGAACAAACAAACATGACC 59.501 41.667 0.00 0.00 34.04 4.02
1979 2087 5.650543 GTCAAGAACAAACAAACATGACCT 58.349 37.500 0.00 0.00 31.99 3.85
1980 2088 6.099341 GTCAAGAACAAACAAACATGACCTT 58.901 36.000 0.00 0.00 31.99 3.50
1981 2089 6.589907 GTCAAGAACAAACAAACATGACCTTT 59.410 34.615 0.00 0.00 31.99 3.11
1982 2090 6.811170 TCAAGAACAAACAAACATGACCTTTC 59.189 34.615 0.00 0.00 0.00 2.62
1983 2091 6.530019 AGAACAAACAAACATGACCTTTCT 57.470 33.333 0.00 0.00 0.00 2.52
1984 2092 7.639113 AGAACAAACAAACATGACCTTTCTA 57.361 32.000 0.00 0.00 0.00 2.10
1985 2093 8.062065 AGAACAAACAAACATGACCTTTCTAA 57.938 30.769 0.00 0.00 0.00 2.10
1986 2094 8.527810 AGAACAAACAAACATGACCTTTCTAAA 58.472 29.630 0.00 0.00 0.00 1.85
1987 2095 9.145865 GAACAAACAAACATGACCTTTCTAAAA 57.854 29.630 0.00 0.00 0.00 1.52
1988 2096 9.665719 AACAAACAAACATGACCTTTCTAAAAT 57.334 25.926 0.00 0.00 0.00 1.82
1989 2097 9.665719 ACAAACAAACATGACCTTTCTAAAATT 57.334 25.926 0.00 0.00 0.00 1.82
1993 2101 9.108284 ACAAACATGACCTTTCTAAAATTTTGG 57.892 29.630 13.76 10.78 0.00 3.28
1994 2102 9.108284 CAAACATGACCTTTCTAAAATTTTGGT 57.892 29.630 13.76 11.18 0.00 3.67
1995 2103 8.887036 AACATGACCTTTCTAAAATTTTGGTC 57.113 30.769 21.82 21.82 41.81 4.02
1996 2104 7.145323 ACATGACCTTTCTAAAATTTTGGTCG 58.855 34.615 22.50 15.73 43.66 4.79
1997 2105 5.525199 TGACCTTTCTAAAATTTTGGTCGC 58.475 37.500 22.50 9.49 43.66 5.19
1998 2106 5.067936 TGACCTTTCTAAAATTTTGGTCGCA 59.932 36.000 22.50 11.27 43.66 5.10
1999 2107 5.528870 ACCTTTCTAAAATTTTGGTCGCAG 58.471 37.500 13.76 1.96 0.00 5.18
2000 2108 5.300792 ACCTTTCTAAAATTTTGGTCGCAGA 59.699 36.000 13.76 4.37 0.00 4.26
2001 2109 6.015434 ACCTTTCTAAAATTTTGGTCGCAGAT 60.015 34.615 13.76 0.00 40.67 2.90
2002 2110 6.528072 CCTTTCTAAAATTTTGGTCGCAGATC 59.472 38.462 13.76 0.00 40.67 2.75
2003 2111 6.817765 TTCTAAAATTTTGGTCGCAGATCT 57.182 33.333 13.76 0.00 39.28 2.75
2004 2112 6.422776 TCTAAAATTTTGGTCGCAGATCTC 57.577 37.500 13.76 0.00 39.28 2.75
2005 2113 6.173339 TCTAAAATTTTGGTCGCAGATCTCT 58.827 36.000 13.76 0.00 39.28 3.10
2006 2114 7.327975 TCTAAAATTTTGGTCGCAGATCTCTA 58.672 34.615 13.76 0.00 39.28 2.43
2007 2115 7.987458 TCTAAAATTTTGGTCGCAGATCTCTAT 59.013 33.333 13.76 0.00 39.28 1.98
2008 2116 7.396540 AAAATTTTGGTCGCAGATCTCTATT 57.603 32.000 1.75 0.00 39.28 1.73
2009 2117 5.998454 ATTTTGGTCGCAGATCTCTATTG 57.002 39.130 0.00 0.00 39.28 1.90
2010 2118 4.736126 TTTGGTCGCAGATCTCTATTGA 57.264 40.909 0.00 0.00 39.28 2.57
2011 2119 3.717400 TGGTCGCAGATCTCTATTGAC 57.283 47.619 0.00 0.00 39.28 3.18
2012 2120 2.362397 TGGTCGCAGATCTCTATTGACC 59.638 50.000 16.06 16.06 39.28 4.02
2013 2121 2.362397 GGTCGCAGATCTCTATTGACCA 59.638 50.000 17.22 0.00 40.67 4.02
2014 2122 3.181475 GGTCGCAGATCTCTATTGACCAA 60.181 47.826 17.22 0.00 40.67 3.67
2015 2123 4.433615 GTCGCAGATCTCTATTGACCAAA 58.566 43.478 0.00 0.00 40.67 3.28
2016 2124 4.870426 GTCGCAGATCTCTATTGACCAAAA 59.130 41.667 0.00 0.00 40.67 2.44
2017 2125 5.525378 GTCGCAGATCTCTATTGACCAAAAT 59.475 40.000 0.00 0.00 40.67 1.82
2018 2126 6.037610 GTCGCAGATCTCTATTGACCAAAATT 59.962 38.462 0.00 0.00 40.67 1.82
2019 2127 6.599244 TCGCAGATCTCTATTGACCAAAATTT 59.401 34.615 0.00 0.00 0.00 1.82
2020 2128 7.121168 TCGCAGATCTCTATTGACCAAAATTTT 59.879 33.333 0.00 0.00 0.00 1.82
2021 2129 7.219535 CGCAGATCTCTATTGACCAAAATTTTG 59.780 37.037 21.65 21.65 37.90 2.44
2036 2144 6.964908 CAAAATTTTGGTTTGGTCATTACCC 58.035 36.000 21.00 0.00 38.51 3.69
2037 2145 5.896073 AATTTTGGTTTGGTCATTACCCA 57.104 34.783 0.00 0.00 46.16 4.51
2038 2146 6.446909 AATTTTGGTTTGGTCATTACCCAT 57.553 33.333 0.00 0.00 46.16 4.00
2039 2147 5.896073 TTTTGGTTTGGTCATTACCCATT 57.104 34.783 0.00 0.00 46.16 3.16
2040 2148 5.896073 TTTGGTTTGGTCATTACCCATTT 57.104 34.783 0.00 0.00 46.16 2.32
2041 2149 5.476091 TTGGTTTGGTCATTACCCATTTC 57.524 39.130 0.00 0.00 46.16 2.17
2042 2150 4.746466 TGGTTTGGTCATTACCCATTTCT 58.254 39.130 0.00 0.00 46.16 2.52
2043 2151 4.770010 TGGTTTGGTCATTACCCATTTCTC 59.230 41.667 0.00 0.00 46.16 2.87
2044 2152 5.016831 GGTTTGGTCATTACCCATTTCTCT 58.983 41.667 0.00 0.00 46.16 3.10
2045 2153 5.105756 GGTTTGGTCATTACCCATTTCTCTG 60.106 44.000 0.00 0.00 46.16 3.35
2046 2154 5.512942 TTGGTCATTACCCATTTCTCTGA 57.487 39.130 0.00 0.00 46.16 3.27
2047 2155 5.102953 TGGTCATTACCCATTTCTCTGAG 57.897 43.478 0.00 0.00 46.16 3.35
2048 2156 3.879892 GGTCATTACCCATTTCTCTGAGC 59.120 47.826 0.00 0.00 40.21 4.26
2049 2157 3.879892 GTCATTACCCATTTCTCTGAGCC 59.120 47.826 0.00 0.00 0.00 4.70
2050 2158 3.523157 TCATTACCCATTTCTCTGAGCCA 59.477 43.478 0.00 0.00 0.00 4.75
2051 2159 3.350219 TTACCCATTTCTCTGAGCCAC 57.650 47.619 0.00 0.00 0.00 5.01
2052 2160 1.067295 ACCCATTTCTCTGAGCCACA 58.933 50.000 0.00 0.00 0.00 4.17
2053 2161 1.637553 ACCCATTTCTCTGAGCCACAT 59.362 47.619 0.00 0.00 0.00 3.21
2054 2162 2.846206 ACCCATTTCTCTGAGCCACATA 59.154 45.455 0.00 0.00 0.00 2.29
2055 2163 3.118112 ACCCATTTCTCTGAGCCACATAG 60.118 47.826 0.00 0.00 0.00 2.23
2056 2164 3.474600 CCATTTCTCTGAGCCACATAGG 58.525 50.000 0.00 0.00 41.84 2.57
2057 2165 3.135348 CCATTTCTCTGAGCCACATAGGA 59.865 47.826 0.00 0.00 41.22 2.94
2058 2166 4.202440 CCATTTCTCTGAGCCACATAGGAT 60.202 45.833 0.00 0.00 41.22 3.24
2069 2177 3.766068 CACATAGGATCTGATGTGGCT 57.234 47.619 22.59 2.00 46.03 4.75
2070 2178 4.879197 CACATAGGATCTGATGTGGCTA 57.121 45.455 22.59 3.87 46.03 3.93
2071 2179 5.219343 CACATAGGATCTGATGTGGCTAA 57.781 43.478 22.59 0.00 46.03 3.09
2072 2180 5.236282 CACATAGGATCTGATGTGGCTAAG 58.764 45.833 22.59 6.04 46.03 2.18
2073 2181 2.926778 AGGATCTGATGTGGCTAAGC 57.073 50.000 0.00 0.00 0.00 3.09
2074 2182 2.406559 AGGATCTGATGTGGCTAAGCT 58.593 47.619 0.00 0.00 0.00 3.74
2075 2183 2.104451 AGGATCTGATGTGGCTAAGCTG 59.896 50.000 0.00 0.00 0.00 4.24
2076 2184 2.103771 GGATCTGATGTGGCTAAGCTGA 59.896 50.000 0.00 0.00 0.00 4.26
2077 2185 2.680312 TCTGATGTGGCTAAGCTGAC 57.320 50.000 0.00 0.00 0.00 3.51
2078 2186 1.134995 TCTGATGTGGCTAAGCTGACG 60.135 52.381 0.00 0.00 0.00 4.35
2079 2187 0.608130 TGATGTGGCTAAGCTGACGT 59.392 50.000 0.00 0.00 0.00 4.34
2080 2188 1.002366 GATGTGGCTAAGCTGACGTG 58.998 55.000 0.00 0.00 0.00 4.49
2081 2189 0.391661 ATGTGGCTAAGCTGACGTGG 60.392 55.000 0.00 0.00 0.00 4.94
2082 2190 2.047274 TGGCTAAGCTGACGTGGC 60.047 61.111 0.00 0.00 0.00 5.01
2083 2191 2.047274 GGCTAAGCTGACGTGGCA 60.047 61.111 11.79 0.00 33.47 4.92
2084 2192 1.450312 GGCTAAGCTGACGTGGCAT 60.450 57.895 11.79 3.50 33.47 4.40
2085 2193 1.026718 GGCTAAGCTGACGTGGCATT 61.027 55.000 11.79 6.50 33.47 3.56
2086 2194 0.097674 GCTAAGCTGACGTGGCATTG 59.902 55.000 11.79 3.43 32.13 2.82
2087 2195 0.097674 CTAAGCTGACGTGGCATTGC 59.902 55.000 11.79 0.00 0.00 3.56
2088 2196 0.321564 TAAGCTGACGTGGCATTGCT 60.322 50.000 8.82 0.00 0.00 3.91
2089 2197 0.321564 AAGCTGACGTGGCATTGCTA 60.322 50.000 8.82 0.00 0.00 3.49
2090 2198 0.742281 AGCTGACGTGGCATTGCTAG 60.742 55.000 8.82 3.05 0.00 3.42
2091 2199 1.021390 GCTGACGTGGCATTGCTAGT 61.021 55.000 8.82 6.27 0.00 2.57
2092 2200 0.723414 CTGACGTGGCATTGCTAGTG 59.277 55.000 8.82 0.65 0.00 2.74
2093 2201 0.320050 TGACGTGGCATTGCTAGTGA 59.680 50.000 8.82 0.00 0.00 3.41
2094 2202 0.721718 GACGTGGCATTGCTAGTGAC 59.278 55.000 8.82 0.00 0.00 3.67
2095 2203 0.673644 ACGTGGCATTGCTAGTGACC 60.674 55.000 8.82 0.00 0.00 4.02
2096 2204 0.673333 CGTGGCATTGCTAGTGACCA 60.673 55.000 8.82 0.00 0.00 4.02
2097 2205 1.533625 GTGGCATTGCTAGTGACCAA 58.466 50.000 8.82 0.00 0.00 3.67
2098 2206 1.885887 GTGGCATTGCTAGTGACCAAA 59.114 47.619 8.82 0.00 0.00 3.28
2099 2207 2.493278 GTGGCATTGCTAGTGACCAAAT 59.507 45.455 8.82 0.00 0.00 2.32
2100 2208 2.492881 TGGCATTGCTAGTGACCAAATG 59.507 45.455 8.82 0.00 0.00 2.32
2101 2209 2.754552 GGCATTGCTAGTGACCAAATGA 59.245 45.455 8.82 0.00 0.00 2.57
2102 2210 3.193267 GGCATTGCTAGTGACCAAATGAA 59.807 43.478 8.82 0.00 0.00 2.57
2103 2211 4.321899 GGCATTGCTAGTGACCAAATGAAA 60.322 41.667 8.82 0.00 0.00 2.69
2104 2212 5.413499 GCATTGCTAGTGACCAAATGAAAT 58.587 37.500 0.16 0.00 0.00 2.17
2105 2213 5.517770 GCATTGCTAGTGACCAAATGAAATC 59.482 40.000 0.16 0.00 0.00 2.17
2106 2214 6.623486 CATTGCTAGTGACCAAATGAAATCA 58.377 36.000 0.00 0.00 0.00 2.57
2107 2215 6.839124 TTGCTAGTGACCAAATGAAATCAT 57.161 33.333 0.00 0.00 38.41 2.45
2108 2216 6.441093 TGCTAGTGACCAAATGAAATCATC 57.559 37.500 0.00 0.00 35.10 2.92
2109 2217 5.945191 TGCTAGTGACCAAATGAAATCATCA 59.055 36.000 0.00 0.00 43.67 3.07
2124 2232 7.267128 TGAAATCATCATAAATTTCACAGCCC 58.733 34.615 6.45 0.00 43.41 5.19
2125 2233 4.898829 TCATCATAAATTTCACAGCCCG 57.101 40.909 0.00 0.00 0.00 6.13
2126 2234 4.522114 TCATCATAAATTTCACAGCCCGA 58.478 39.130 0.00 0.00 0.00 5.14
2127 2235 5.132502 TCATCATAAATTTCACAGCCCGAT 58.867 37.500 0.00 0.00 0.00 4.18
2128 2236 5.239306 TCATCATAAATTTCACAGCCCGATC 59.761 40.000 0.00 0.00 0.00 3.69
2129 2237 3.882888 TCATAAATTTCACAGCCCGATCC 59.117 43.478 0.00 0.00 0.00 3.36
2130 2238 2.214376 AAATTTCACAGCCCGATCCA 57.786 45.000 0.00 0.00 0.00 3.41
2131 2239 1.463674 AATTTCACAGCCCGATCCAC 58.536 50.000 0.00 0.00 0.00 4.02
2132 2240 0.394352 ATTTCACAGCCCGATCCACC 60.394 55.000 0.00 0.00 0.00 4.61
2133 2241 1.773856 TTTCACAGCCCGATCCACCA 61.774 55.000 0.00 0.00 0.00 4.17
2134 2242 1.773856 TTCACAGCCCGATCCACCAA 61.774 55.000 0.00 0.00 0.00 3.67
2135 2243 1.077501 CACAGCCCGATCCACCAAT 60.078 57.895 0.00 0.00 0.00 3.16
2136 2244 1.097547 CACAGCCCGATCCACCAATC 61.098 60.000 0.00 0.00 0.00 2.67
2137 2245 1.274703 ACAGCCCGATCCACCAATCT 61.275 55.000 0.00 0.00 0.00 2.40
2138 2246 0.758734 CAGCCCGATCCACCAATCTA 59.241 55.000 0.00 0.00 0.00 1.98
2139 2247 1.051812 AGCCCGATCCACCAATCTAG 58.948 55.000 0.00 0.00 0.00 2.43
2140 2248 0.603975 GCCCGATCCACCAATCTAGC 60.604 60.000 0.00 0.00 0.00 3.42
2141 2249 0.035458 CCCGATCCACCAATCTAGCC 59.965 60.000 0.00 0.00 0.00 3.93
2142 2250 1.051812 CCGATCCACCAATCTAGCCT 58.948 55.000 0.00 0.00 0.00 4.58
2143 2251 2.248248 CCGATCCACCAATCTAGCCTA 58.752 52.381 0.00 0.00 0.00 3.93
2144 2252 2.028930 CCGATCCACCAATCTAGCCTAC 60.029 54.545 0.00 0.00 0.00 3.18
2145 2253 2.628178 CGATCCACCAATCTAGCCTACA 59.372 50.000 0.00 0.00 0.00 2.74
2146 2254 3.259374 CGATCCACCAATCTAGCCTACAT 59.741 47.826 0.00 0.00 0.00 2.29
2147 2255 4.573900 GATCCACCAATCTAGCCTACATG 58.426 47.826 0.00 0.00 0.00 3.21
2148 2256 2.705658 TCCACCAATCTAGCCTACATGG 59.294 50.000 0.00 0.00 39.35 3.66
2149 2257 2.224621 CCACCAATCTAGCCTACATGGG 60.225 54.545 0.00 0.00 36.00 4.00
2167 2275 2.309136 GGCCTGGCCCAATACATATT 57.691 50.000 27.77 0.00 44.06 1.28
2168 2276 2.608623 GGCCTGGCCCAATACATATTT 58.391 47.619 27.77 0.00 44.06 1.40
2169 2277 2.972021 GGCCTGGCCCAATACATATTTT 59.028 45.455 27.77 0.00 44.06 1.82
2170 2278 4.156477 GGCCTGGCCCAATACATATTTTA 58.844 43.478 27.77 0.00 44.06 1.52
2171 2279 4.777366 GGCCTGGCCCAATACATATTTTAT 59.223 41.667 27.77 0.00 44.06 1.40
2172 2280 5.248248 GGCCTGGCCCAATACATATTTTATT 59.752 40.000 27.77 0.00 44.06 1.40
2173 2281 6.439058 GGCCTGGCCCAATACATATTTTATTA 59.561 38.462 27.77 0.00 44.06 0.98
2174 2282 7.125659 GGCCTGGCCCAATACATATTTTATTAT 59.874 37.037 27.77 0.00 44.06 1.28
2175 2283 9.196139 GCCTGGCCCAATACATATTTTATTATA 57.804 33.333 7.66 0.00 0.00 0.98
2204 2312 8.491331 AATGTTTAATTTGTATGGGTTGATGC 57.509 30.769 0.00 0.00 0.00 3.91
2205 2313 6.997655 TGTTTAATTTGTATGGGTTGATGCA 58.002 32.000 0.00 0.00 0.00 3.96
2206 2314 7.619050 TGTTTAATTTGTATGGGTTGATGCAT 58.381 30.769 0.00 0.00 0.00 3.96
2207 2315 8.099537 TGTTTAATTTGTATGGGTTGATGCATT 58.900 29.630 0.00 0.00 0.00 3.56
2208 2316 9.593134 GTTTAATTTGTATGGGTTGATGCATTA 57.407 29.630 0.00 0.00 0.00 1.90
2212 2320 9.683870 AATTTGTATGGGTTGATGCATTATTTT 57.316 25.926 0.00 0.00 0.00 1.82
2213 2321 8.489990 TTTGTATGGGTTGATGCATTATTTTG 57.510 30.769 0.00 0.00 0.00 2.44
2214 2322 7.180322 TGTATGGGTTGATGCATTATTTTGT 57.820 32.000 0.00 0.00 0.00 2.83
2215 2323 7.264221 TGTATGGGTTGATGCATTATTTTGTC 58.736 34.615 0.00 0.00 0.00 3.18
2216 2324 5.735285 TGGGTTGATGCATTATTTTGTCA 57.265 34.783 0.00 0.00 0.00 3.58
2217 2325 5.722263 TGGGTTGATGCATTATTTTGTCAG 58.278 37.500 0.00 0.00 0.00 3.51
2218 2326 5.479724 TGGGTTGATGCATTATTTTGTCAGA 59.520 36.000 0.00 0.00 0.00 3.27
2219 2327 6.014755 TGGGTTGATGCATTATTTTGTCAGAA 60.015 34.615 0.00 0.00 0.00 3.02
2220 2328 6.532657 GGGTTGATGCATTATTTTGTCAGAAG 59.467 38.462 0.00 0.00 0.00 2.85
2221 2329 6.035327 GGTTGATGCATTATTTTGTCAGAAGC 59.965 38.462 0.00 0.00 0.00 3.86
2222 2330 6.270156 TGATGCATTATTTTGTCAGAAGCA 57.730 33.333 0.00 0.00 0.00 3.91
2223 2331 6.869695 TGATGCATTATTTTGTCAGAAGCAT 58.130 32.000 0.00 0.00 42.23 3.79
2224 2332 6.754675 TGATGCATTATTTTGTCAGAAGCATG 59.245 34.615 0.00 0.00 39.94 4.06
2225 2333 4.865925 TGCATTATTTTGTCAGAAGCATGC 59.134 37.500 10.51 10.51 35.99 4.06
2226 2334 4.865925 GCATTATTTTGTCAGAAGCATGCA 59.134 37.500 21.98 0.00 35.60 3.96
2227 2335 5.522460 GCATTATTTTGTCAGAAGCATGCAT 59.478 36.000 21.98 8.13 35.60 3.96
2228 2336 6.698329 GCATTATTTTGTCAGAAGCATGCATA 59.302 34.615 21.98 1.58 35.60 3.14
2229 2337 7.384115 GCATTATTTTGTCAGAAGCATGCATAT 59.616 33.333 21.98 1.17 35.60 1.78
2230 2338 9.902196 CATTATTTTGTCAGAAGCATGCATATA 57.098 29.630 21.98 0.00 0.00 0.86
2233 2341 7.571080 TTTTGTCAGAAGCATGCATATATCA 57.429 32.000 21.98 9.30 0.00 2.15
2234 2342 7.571080 TTTGTCAGAAGCATGCATATATCAA 57.429 32.000 21.98 14.54 0.00 2.57
2235 2343 6.796705 TGTCAGAAGCATGCATATATCAAG 57.203 37.500 21.98 6.95 0.00 3.02
2236 2344 6.527423 TGTCAGAAGCATGCATATATCAAGA 58.473 36.000 21.98 8.91 0.00 3.02
2237 2345 7.166167 TGTCAGAAGCATGCATATATCAAGAT 58.834 34.615 21.98 0.00 0.00 2.40
2238 2346 8.316214 TGTCAGAAGCATGCATATATCAAGATA 58.684 33.333 21.98 7.58 0.00 1.98
2239 2347 8.819015 GTCAGAAGCATGCATATATCAAGATAG 58.181 37.037 21.98 0.00 0.00 2.08
2240 2348 7.985752 TCAGAAGCATGCATATATCAAGATAGG 59.014 37.037 21.98 0.00 0.00 2.57
2241 2349 6.766944 AGAAGCATGCATATATCAAGATAGGC 59.233 38.462 21.98 0.00 39.09 3.93
2242 2350 5.374921 AGCATGCATATATCAAGATAGGCC 58.625 41.667 21.98 0.00 38.11 5.19
2243 2351 4.518211 GCATGCATATATCAAGATAGGCCC 59.482 45.833 14.21 0.00 38.11 5.80
2244 2352 5.687780 CATGCATATATCAAGATAGGCCCA 58.312 41.667 0.00 0.00 38.11 5.36
2245 2353 5.981494 TGCATATATCAAGATAGGCCCAT 57.019 39.130 0.00 0.00 38.11 4.00
2246 2354 6.331577 TGCATATATCAAGATAGGCCCATT 57.668 37.500 0.00 0.00 38.11 3.16
2247 2355 7.450323 TGCATATATCAAGATAGGCCCATTA 57.550 36.000 0.00 0.00 38.11 1.90
2248 2356 7.871082 TGCATATATCAAGATAGGCCCATTAA 58.129 34.615 0.00 0.00 38.11 1.40
2249 2357 8.335484 TGCATATATCAAGATAGGCCCATTAAA 58.665 33.333 0.00 0.00 38.11 1.52
2250 2358 9.189156 GCATATATCAAGATAGGCCCATTAAAA 57.811 33.333 0.00 0.00 33.91 1.52
2253 2361 5.852282 TCAAGATAGGCCCATTAAAAAGC 57.148 39.130 0.00 0.00 0.00 3.51
2254 2362 5.268387 TCAAGATAGGCCCATTAAAAAGCA 58.732 37.500 0.00 0.00 0.00 3.91
2255 2363 5.719085 TCAAGATAGGCCCATTAAAAAGCAA 59.281 36.000 0.00 0.00 0.00 3.91
2256 2364 5.859205 AGATAGGCCCATTAAAAAGCAAG 57.141 39.130 0.00 0.00 0.00 4.01
2257 2365 5.272402 AGATAGGCCCATTAAAAAGCAAGT 58.728 37.500 0.00 0.00 0.00 3.16
2258 2366 6.431722 AGATAGGCCCATTAAAAAGCAAGTA 58.568 36.000 0.00 0.00 0.00 2.24
2259 2367 4.801330 AGGCCCATTAAAAAGCAAGTAC 57.199 40.909 0.00 0.00 0.00 2.73
2260 2368 4.156477 AGGCCCATTAAAAAGCAAGTACA 58.844 39.130 0.00 0.00 0.00 2.90
2261 2369 4.591072 AGGCCCATTAAAAAGCAAGTACAA 59.409 37.500 0.00 0.00 0.00 2.41
2262 2370 4.688879 GGCCCATTAAAAAGCAAGTACAAC 59.311 41.667 0.00 0.00 0.00 3.32
2263 2371 5.293560 GCCCATTAAAAAGCAAGTACAACA 58.706 37.500 0.00 0.00 0.00 3.33
2264 2372 5.755861 GCCCATTAAAAAGCAAGTACAACAA 59.244 36.000 0.00 0.00 0.00 2.83
2265 2373 6.258947 GCCCATTAAAAAGCAAGTACAACAAA 59.741 34.615 0.00 0.00 0.00 2.83
2266 2374 7.201652 GCCCATTAAAAAGCAAGTACAACAAAA 60.202 33.333 0.00 0.00 0.00 2.44
2267 2375 8.835439 CCCATTAAAAAGCAAGTACAACAAAAT 58.165 29.630 0.00 0.00 0.00 1.82
2277 2385 9.139174 AGCAAGTACAACAAAATACAATATTGC 57.861 29.630 15.48 0.00 37.61 3.56
2278 2386 8.920665 GCAAGTACAACAAAATACAATATTGCA 58.079 29.630 15.48 2.71 37.37 4.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
271 278 4.232091 ACCCTAAACAGAGGAAGAAGTGA 58.768 43.478 0.00 0.00 39.15 3.41
309 316 0.748450 CATTCGCTGGGCCATGAATT 59.252 50.000 23.89 11.99 0.00 2.17
664 673 2.233431 GGCATGACTGTCACTCTTCTCT 59.767 50.000 13.50 0.00 0.00 3.10
858 899 1.816863 GACACCCTCAGGCGTCTTCA 61.817 60.000 4.57 0.00 41.29 3.02
948 993 1.490490 ACCTTGCAGAAGTGAGTTGGA 59.510 47.619 0.00 0.00 0.00 3.53
1173 1220 1.270358 GGAGTGAGGAGCTTGAACGTT 60.270 52.381 0.00 0.00 0.00 3.99
1305 1352 5.372547 AGCATAATTCGATAGTACGCTCA 57.627 39.130 0.00 0.00 37.40 4.26
1524 1612 1.209019 TGTTTGGTTGCCTGCATGTTT 59.791 42.857 0.00 0.00 0.00 2.83
1685 1793 1.821216 AACCATGGACAACGGTCATC 58.179 50.000 21.47 0.00 46.17 2.92
1690 1798 3.058501 GTCAGTTAAACCATGGACAACGG 60.059 47.826 21.47 17.77 0.00 4.44
1691 1799 3.813166 AGTCAGTTAAACCATGGACAACG 59.187 43.478 21.47 13.75 0.00 4.10
1692 1800 4.819630 TGAGTCAGTTAAACCATGGACAAC 59.180 41.667 21.47 17.64 0.00 3.32
1693 1801 5.042463 TGAGTCAGTTAAACCATGGACAA 57.958 39.130 21.47 6.03 0.00 3.18
1694 1802 4.641396 CTGAGTCAGTTAAACCATGGACA 58.359 43.478 21.47 0.00 0.00 4.02
1695 1803 3.437049 GCTGAGTCAGTTAAACCATGGAC 59.563 47.826 21.47 5.89 33.43 4.02
1696 1804 3.072330 TGCTGAGTCAGTTAAACCATGGA 59.928 43.478 21.47 0.00 33.43 3.41
1697 1805 3.411446 TGCTGAGTCAGTTAAACCATGG 58.589 45.455 21.06 11.19 33.43 3.66
1698 1806 4.614535 GCTTGCTGAGTCAGTTAAACCATG 60.615 45.833 21.06 11.90 33.43 3.66
1699 1807 3.503748 GCTTGCTGAGTCAGTTAAACCAT 59.496 43.478 21.06 0.00 33.43 3.55
1700 1808 2.878406 GCTTGCTGAGTCAGTTAAACCA 59.122 45.455 21.06 6.88 33.43 3.67
1701 1809 3.142174 AGCTTGCTGAGTCAGTTAAACC 58.858 45.455 21.06 10.37 33.43 3.27
1702 1810 4.531332 CAAGCTTGCTGAGTCAGTTAAAC 58.469 43.478 21.06 11.94 33.43 2.01
1703 1811 3.565482 CCAAGCTTGCTGAGTCAGTTAAA 59.435 43.478 21.43 12.18 33.43 1.52
1704 1812 3.141398 CCAAGCTTGCTGAGTCAGTTAA 58.859 45.455 21.43 14.93 33.43 2.01
1705 1813 2.368548 TCCAAGCTTGCTGAGTCAGTTA 59.631 45.455 21.43 8.42 33.43 2.24
1706 1814 1.141657 TCCAAGCTTGCTGAGTCAGTT 59.858 47.619 21.43 4.64 33.43 3.16
1707 1815 0.761187 TCCAAGCTTGCTGAGTCAGT 59.239 50.000 21.43 0.00 33.43 3.41
1708 1816 1.805345 CTTCCAAGCTTGCTGAGTCAG 59.195 52.381 21.43 16.21 34.12 3.51
1709 1817 1.888215 CTTCCAAGCTTGCTGAGTCA 58.112 50.000 21.43 0.00 0.00 3.41
1721 1829 1.201647 CTGCAGACCAATGCTTCCAAG 59.798 52.381 8.42 0.00 46.63 3.61
1722 1830 1.250328 CTGCAGACCAATGCTTCCAA 58.750 50.000 8.42 0.00 46.63 3.53
1723 1831 0.609957 CCTGCAGACCAATGCTTCCA 60.610 55.000 17.39 0.00 46.63 3.53
1724 1832 1.318158 CCCTGCAGACCAATGCTTCC 61.318 60.000 17.39 0.00 46.63 3.46
1725 1833 0.322816 TCCCTGCAGACCAATGCTTC 60.323 55.000 17.39 0.00 46.63 3.86
1726 1834 0.112995 TTCCCTGCAGACCAATGCTT 59.887 50.000 17.39 0.00 46.63 3.91
1727 1835 0.323178 CTTCCCTGCAGACCAATGCT 60.323 55.000 17.39 0.00 46.63 3.79
1728 1836 1.941999 GCTTCCCTGCAGACCAATGC 61.942 60.000 17.39 7.90 46.68 3.56
1729 1837 0.323178 AGCTTCCCTGCAGACCAATG 60.323 55.000 17.39 0.00 34.99 2.82
1730 1838 0.407139 AAGCTTCCCTGCAGACCAAT 59.593 50.000 17.39 0.00 34.99 3.16
1731 1839 0.185901 AAAGCTTCCCTGCAGACCAA 59.814 50.000 17.39 3.48 34.99 3.67
1732 1840 1.064003 TAAAGCTTCCCTGCAGACCA 58.936 50.000 17.39 0.00 34.99 4.02
1733 1841 2.092699 AGATAAAGCTTCCCTGCAGACC 60.093 50.000 17.39 0.00 34.99 3.85
1734 1842 3.118445 AGAGATAAAGCTTCCCTGCAGAC 60.118 47.826 17.39 0.00 34.99 3.51
1735 1843 3.110705 AGAGATAAAGCTTCCCTGCAGA 58.889 45.455 17.39 0.00 34.99 4.26
1736 1844 3.465871 GAGAGATAAAGCTTCCCTGCAG 58.534 50.000 6.78 6.78 34.99 4.41
1737 1845 2.159043 CGAGAGATAAAGCTTCCCTGCA 60.159 50.000 0.00 0.00 34.99 4.41
1738 1846 2.478831 CGAGAGATAAAGCTTCCCTGC 58.521 52.381 0.00 0.00 0.00 4.85
1739 1847 2.102252 AGCGAGAGATAAAGCTTCCCTG 59.898 50.000 0.00 0.00 36.41 4.45
1740 1848 2.393646 AGCGAGAGATAAAGCTTCCCT 58.606 47.619 0.00 0.00 36.41 4.20
1741 1849 2.869192 CAAGCGAGAGATAAAGCTTCCC 59.131 50.000 0.00 0.00 46.71 3.97
1742 1850 3.308323 CACAAGCGAGAGATAAAGCTTCC 59.692 47.826 0.00 0.00 46.71 3.46
1743 1851 4.032331 GTCACAAGCGAGAGATAAAGCTTC 59.968 45.833 0.00 0.00 46.71 3.86
1745 1853 3.516615 GTCACAAGCGAGAGATAAAGCT 58.483 45.455 0.00 0.00 42.35 3.74
1746 1854 2.605366 GGTCACAAGCGAGAGATAAAGC 59.395 50.000 0.00 0.00 0.00 3.51
1747 1855 4.109050 GAGGTCACAAGCGAGAGATAAAG 58.891 47.826 0.00 0.00 0.00 1.85
1748 1856 3.119101 GGAGGTCACAAGCGAGAGATAAA 60.119 47.826 0.00 0.00 0.00 1.40
1749 1857 2.427453 GGAGGTCACAAGCGAGAGATAA 59.573 50.000 0.00 0.00 0.00 1.75
1750 1858 2.025155 GGAGGTCACAAGCGAGAGATA 58.975 52.381 0.00 0.00 0.00 1.98
1751 1859 0.820871 GGAGGTCACAAGCGAGAGAT 59.179 55.000 0.00 0.00 0.00 2.75
1752 1860 0.539669 TGGAGGTCACAAGCGAGAGA 60.540 55.000 0.00 0.00 0.00 3.10
1753 1861 0.389166 GTGGAGGTCACAAGCGAGAG 60.389 60.000 0.00 0.00 45.39 3.20
1754 1862 1.666011 GTGGAGGTCACAAGCGAGA 59.334 57.895 0.00 0.00 45.39 4.04
1755 1863 4.268687 GTGGAGGTCACAAGCGAG 57.731 61.111 0.00 0.00 45.39 5.03
1762 1870 1.067495 GCACAGAGTAGTGGAGGTCAC 60.067 57.143 0.00 0.00 46.39 3.67
1763 1871 1.203063 AGCACAGAGTAGTGGAGGTCA 60.203 52.381 0.00 0.00 39.87 4.02
1764 1872 1.474879 GAGCACAGAGTAGTGGAGGTC 59.525 57.143 0.00 0.00 39.87 3.85
1765 1873 1.551452 GAGCACAGAGTAGTGGAGGT 58.449 55.000 0.00 0.00 39.87 3.85
1766 1874 0.820871 GGAGCACAGAGTAGTGGAGG 59.179 60.000 0.00 0.00 39.87 4.30
1767 1875 1.550327 TGGAGCACAGAGTAGTGGAG 58.450 55.000 0.00 0.00 39.87 3.86
1768 1876 3.765968 TGGAGCACAGAGTAGTGGA 57.234 52.632 0.00 0.00 39.87 4.02
1778 1886 1.765904 TGTTTGACTACCTGGAGCACA 59.234 47.619 0.00 0.00 0.00 4.57
1779 1887 2.543777 TGTTTGACTACCTGGAGCAC 57.456 50.000 0.00 0.00 0.00 4.40
1780 1888 2.371841 ACATGTTTGACTACCTGGAGCA 59.628 45.455 0.00 0.00 0.00 4.26
1781 1889 3.059352 ACATGTTTGACTACCTGGAGC 57.941 47.619 0.00 0.00 0.00 4.70
1792 1900 7.629262 CTGGACAACAGCCAAACATGTTTGA 62.629 44.000 40.01 21.72 44.90 2.69
1793 1901 2.865551 GGACAACAGCCAAACATGTTTG 59.134 45.455 34.51 34.51 46.93 2.93
1794 1902 2.499289 TGGACAACAGCCAAACATGTTT 59.501 40.909 18.13 18.13 37.54 2.83
1795 1903 2.101249 CTGGACAACAGCCAAACATGTT 59.899 45.455 4.92 4.92 40.97 2.71
1796 1904 1.682854 CTGGACAACAGCCAAACATGT 59.317 47.619 0.00 0.00 40.97 3.21
1797 1905 2.427232 CTGGACAACAGCCAAACATG 57.573 50.000 0.00 0.00 40.97 3.21
1807 1915 1.052617 TCCCGACAATCTGGACAACA 58.947 50.000 0.00 0.00 0.00 3.33
1808 1916 2.076863 CTTCCCGACAATCTGGACAAC 58.923 52.381 0.00 0.00 29.16 3.32
1809 1917 1.974957 TCTTCCCGACAATCTGGACAA 59.025 47.619 0.00 0.00 29.16 3.18
1810 1918 1.550524 CTCTTCCCGACAATCTGGACA 59.449 52.381 0.00 0.00 29.16 4.02
1811 1919 1.825474 TCTCTTCCCGACAATCTGGAC 59.175 52.381 0.00 0.00 29.16 4.02
1812 1920 2.231716 TCTCTTCCCGACAATCTGGA 57.768 50.000 0.00 0.00 0.00 3.86
1813 1921 3.334583 TTTCTCTTCCCGACAATCTGG 57.665 47.619 0.00 0.00 0.00 3.86
1814 1922 4.507710 TGATTTCTCTTCCCGACAATCTG 58.492 43.478 0.00 0.00 0.00 2.90
1815 1923 4.826274 TGATTTCTCTTCCCGACAATCT 57.174 40.909 0.00 0.00 0.00 2.40
1816 1924 4.878397 ACATGATTTCTCTTCCCGACAATC 59.122 41.667 0.00 0.00 0.00 2.67
1817 1925 4.637534 CACATGATTTCTCTTCCCGACAAT 59.362 41.667 0.00 0.00 0.00 2.71
1818 1926 4.002982 CACATGATTTCTCTTCCCGACAA 58.997 43.478 0.00 0.00 0.00 3.18
1819 1927 3.007940 ACACATGATTTCTCTTCCCGACA 59.992 43.478 0.00 0.00 0.00 4.35
1820 1928 3.600388 ACACATGATTTCTCTTCCCGAC 58.400 45.455 0.00 0.00 0.00 4.79
1821 1929 3.981071 ACACATGATTTCTCTTCCCGA 57.019 42.857 0.00 0.00 0.00 5.14
1822 1930 6.201044 GTGTATACACATGATTTCTCTTCCCG 59.799 42.308 27.37 0.00 45.75 5.14
1823 1931 7.484035 GTGTATACACATGATTTCTCTTCCC 57.516 40.000 27.37 0.00 45.75 3.97
1843 1951 9.729023 CAATGAACAAATTTCTTGTAGTGTGTA 57.271 29.630 0.00 0.00 31.50 2.90
1844 1952 8.250332 ACAATGAACAAATTTCTTGTAGTGTGT 58.750 29.630 0.00 0.00 31.50 3.72
1845 1953 8.633075 ACAATGAACAAATTTCTTGTAGTGTG 57.367 30.769 0.00 0.00 31.50 3.82
1846 1954 9.086336 CAACAATGAACAAATTTCTTGTAGTGT 57.914 29.630 0.00 0.00 31.50 3.55
1847 1955 9.299963 TCAACAATGAACAAATTTCTTGTAGTG 57.700 29.630 0.00 0.00 30.99 2.74
1848 1956 9.301153 GTCAACAATGAACAAATTTCTTGTAGT 57.699 29.630 0.00 0.00 37.30 2.73
1849 1957 8.755018 GGTCAACAATGAACAAATTTCTTGTAG 58.245 33.333 0.00 0.00 43.12 2.74
1850 1958 7.708752 GGGTCAACAATGAACAAATTTCTTGTA 59.291 33.333 0.00 0.00 45.56 2.41
1851 1959 6.538381 GGGTCAACAATGAACAAATTTCTTGT 59.462 34.615 0.00 0.00 45.56 3.16
1852 1960 6.762661 AGGGTCAACAATGAACAAATTTCTTG 59.237 34.615 0.00 0.00 45.56 3.02
1853 1961 6.888105 AGGGTCAACAATGAACAAATTTCTT 58.112 32.000 0.00 0.00 45.56 2.52
1854 1962 6.462909 GGAGGGTCAACAATGAACAAATTTCT 60.463 38.462 0.00 0.00 45.56 2.52
1855 1963 5.696270 GGAGGGTCAACAATGAACAAATTTC 59.304 40.000 0.00 0.00 45.56 2.17
1856 1964 5.130145 TGGAGGGTCAACAATGAACAAATTT 59.870 36.000 0.00 0.00 45.56 1.82
1857 1965 4.653341 TGGAGGGTCAACAATGAACAAATT 59.347 37.500 0.00 0.00 45.56 1.82
1858 1966 4.222336 TGGAGGGTCAACAATGAACAAAT 58.778 39.130 0.00 0.00 45.56 2.32
1859 1967 3.636679 TGGAGGGTCAACAATGAACAAA 58.363 40.909 0.00 0.00 45.56 2.83
1860 1968 3.304911 TGGAGGGTCAACAATGAACAA 57.695 42.857 0.00 0.00 45.56 2.83
1861 1969 3.524095 ATGGAGGGTCAACAATGAACA 57.476 42.857 0.00 0.00 45.56 3.18
1862 1970 4.871933 AAATGGAGGGTCAACAATGAAC 57.128 40.909 0.00 0.00 42.87 3.18
1863 1971 4.040217 CCAAAATGGAGGGTCAACAATGAA 59.960 41.667 0.00 0.00 40.96 2.57
1864 1972 3.577848 CCAAAATGGAGGGTCAACAATGA 59.422 43.478 0.00 0.00 40.96 2.57
1865 1973 3.324556 ACCAAAATGGAGGGTCAACAATG 59.675 43.478 2.85 0.00 40.96 2.82
1866 1974 3.586429 ACCAAAATGGAGGGTCAACAAT 58.414 40.909 2.85 0.00 40.96 2.71
1867 1975 3.039252 ACCAAAATGGAGGGTCAACAA 57.961 42.857 2.85 0.00 40.96 2.83
1868 1976 2.765689 ACCAAAATGGAGGGTCAACA 57.234 45.000 2.85 0.00 40.96 3.33
1873 1981 1.780309 TCAGTGACCAAAATGGAGGGT 59.220 47.619 2.85 0.00 40.96 4.34
1874 1982 2.584835 TCAGTGACCAAAATGGAGGG 57.415 50.000 2.85 0.00 40.96 4.30
1875 1983 3.127548 CGATTCAGTGACCAAAATGGAGG 59.872 47.826 2.85 0.00 40.96 4.30
1876 1984 3.753272 ACGATTCAGTGACCAAAATGGAG 59.247 43.478 2.85 0.00 40.96 3.86
1877 1985 3.750371 ACGATTCAGTGACCAAAATGGA 58.250 40.909 2.85 0.00 40.96 3.41
1878 1986 3.501828 TGACGATTCAGTGACCAAAATGG 59.498 43.478 0.00 0.00 45.02 3.16
1879 1987 4.747540 TGACGATTCAGTGACCAAAATG 57.252 40.909 0.00 0.00 0.00 2.32
1880 1988 5.964958 AATGACGATTCAGTGACCAAAAT 57.035 34.783 0.00 0.00 34.35 1.82
1881 1989 7.174080 TGAATAATGACGATTCAGTGACCAAAA 59.826 33.333 0.00 0.00 38.17 2.44
1882 1990 6.652900 TGAATAATGACGATTCAGTGACCAAA 59.347 34.615 0.00 0.00 38.17 3.28
1883 1991 6.169800 TGAATAATGACGATTCAGTGACCAA 58.830 36.000 0.00 0.00 38.17 3.67
1884 1992 5.729510 TGAATAATGACGATTCAGTGACCA 58.270 37.500 0.00 0.00 38.17 4.02
1885 1993 6.258727 ACATGAATAATGACGATTCAGTGACC 59.741 38.462 0.00 0.00 44.35 4.02
1886 1994 7.239166 ACATGAATAATGACGATTCAGTGAC 57.761 36.000 0.00 0.00 44.35 3.67
1887 1995 7.848223 AACATGAATAATGACGATTCAGTGA 57.152 32.000 0.00 0.00 44.35 3.41
1888 1996 8.900511 AAAACATGAATAATGACGATTCAGTG 57.099 30.769 0.00 5.64 44.35 3.66
1893 2001 9.950680 GGTCATAAAACATGAATAATGACGATT 57.049 29.630 19.62 0.00 38.72 3.34
1894 2002 9.342308 AGGTCATAAAACATGAATAATGACGAT 57.658 29.630 19.62 13.11 38.72 3.73
1895 2003 8.731275 AGGTCATAAAACATGAATAATGACGA 57.269 30.769 19.62 0.00 38.72 4.20
1896 2004 9.225201 CAAGGTCATAAAACATGAATAATGACG 57.775 33.333 19.62 9.96 38.72 4.35
1903 2011 9.260002 GTCAAAACAAGGTCATAAAACATGAAT 57.740 29.630 0.00 0.00 0.00 2.57
1904 2012 7.708752 GGTCAAAACAAGGTCATAAAACATGAA 59.291 33.333 0.00 0.00 0.00 2.57
1905 2013 7.147828 TGGTCAAAACAAGGTCATAAAACATGA 60.148 33.333 0.00 0.00 0.00 3.07
1906 2014 6.983307 TGGTCAAAACAAGGTCATAAAACATG 59.017 34.615 0.00 0.00 0.00 3.21
1907 2015 7.118496 TGGTCAAAACAAGGTCATAAAACAT 57.882 32.000 0.00 0.00 0.00 2.71
1908 2016 6.531503 TGGTCAAAACAAGGTCATAAAACA 57.468 33.333 0.00 0.00 0.00 2.83
1909 2017 7.835634 TTTGGTCAAAACAAGGTCATAAAAC 57.164 32.000 0.00 0.00 0.00 2.43
1910 2018 9.103861 GAATTTGGTCAAAACAAGGTCATAAAA 57.896 29.630 0.00 0.00 33.56 1.52
1911 2019 8.260818 TGAATTTGGTCAAAACAAGGTCATAAA 58.739 29.630 0.00 0.00 33.56 1.40
1912 2020 7.786030 TGAATTTGGTCAAAACAAGGTCATAA 58.214 30.769 0.00 0.00 33.56 1.90
1913 2021 7.353414 TGAATTTGGTCAAAACAAGGTCATA 57.647 32.000 0.00 0.00 33.56 2.15
1914 2022 6.232581 TGAATTTGGTCAAAACAAGGTCAT 57.767 33.333 0.00 0.00 33.56 3.06
1915 2023 5.667539 TGAATTTGGTCAAAACAAGGTCA 57.332 34.783 0.00 0.00 33.56 4.02
1916 2024 6.976636 TTTGAATTTGGTCAAAACAAGGTC 57.023 33.333 13.96 0.00 42.94 3.85
1927 2035 5.660460 ACTGTTGACCTTTTGAATTTGGTC 58.340 37.500 0.00 0.00 46.53 4.02
1928 2036 5.675684 ACTGTTGACCTTTTGAATTTGGT 57.324 34.783 0.00 0.00 35.23 3.67
1929 2037 5.294060 CCAACTGTTGACCTTTTGAATTTGG 59.706 40.000 21.49 0.00 0.00 3.28
1930 2038 5.220643 GCCAACTGTTGACCTTTTGAATTTG 60.221 40.000 21.49 1.22 0.00 2.32
1931 2039 4.875536 GCCAACTGTTGACCTTTTGAATTT 59.124 37.500 21.49 0.00 0.00 1.82
1932 2040 4.441792 GCCAACTGTTGACCTTTTGAATT 58.558 39.130 21.49 0.00 0.00 2.17
1933 2041 3.181466 GGCCAACTGTTGACCTTTTGAAT 60.181 43.478 21.49 0.00 29.56 2.57
1934 2042 2.167487 GGCCAACTGTTGACCTTTTGAA 59.833 45.455 21.49 0.00 29.56 2.69
1935 2043 1.754226 GGCCAACTGTTGACCTTTTGA 59.246 47.619 21.49 0.00 29.56 2.69
1936 2044 1.535860 CGGCCAACTGTTGACCTTTTG 60.536 52.381 21.11 4.53 30.03 2.44
1937 2045 0.744281 CGGCCAACTGTTGACCTTTT 59.256 50.000 21.11 0.00 30.03 2.27
1938 2046 0.395173 ACGGCCAACTGTTGACCTTT 60.395 50.000 21.11 7.51 30.03 3.11
1939 2047 0.818040 GACGGCCAACTGTTGACCTT 60.818 55.000 21.11 13.65 34.75 3.50
1940 2048 1.227853 GACGGCCAACTGTTGACCT 60.228 57.895 21.11 10.12 34.75 3.85
1941 2049 1.098712 TTGACGGCCAACTGTTGACC 61.099 55.000 21.49 18.17 34.75 4.02
1942 2050 0.307760 CTTGACGGCCAACTGTTGAC 59.692 55.000 21.49 10.29 34.75 3.18
1943 2051 0.179234 TCTTGACGGCCAACTGTTGA 59.821 50.000 21.49 0.00 34.75 3.18
1944 2052 1.021202 TTCTTGACGGCCAACTGTTG 58.979 50.000 13.50 13.50 34.75 3.33
1945 2053 1.021968 GTTCTTGACGGCCAACTGTT 58.978 50.000 2.24 0.00 34.75 3.16
1946 2054 0.107410 TGTTCTTGACGGCCAACTGT 60.107 50.000 2.24 0.00 38.42 3.55
1947 2055 1.021202 TTGTTCTTGACGGCCAACTG 58.979 50.000 2.24 0.00 0.00 3.16
1948 2056 1.404035 GTTTGTTCTTGACGGCCAACT 59.596 47.619 2.24 0.00 0.00 3.16
1949 2057 1.133407 TGTTTGTTCTTGACGGCCAAC 59.867 47.619 2.24 0.00 0.00 3.77
1950 2058 1.464734 TGTTTGTTCTTGACGGCCAA 58.535 45.000 2.24 0.00 0.00 4.52
1951 2059 1.464734 TTGTTTGTTCTTGACGGCCA 58.535 45.000 2.24 0.00 0.00 5.36
1952 2060 2.190161 GTTTGTTTGTTCTTGACGGCC 58.810 47.619 0.00 0.00 0.00 6.13
1953 2061 2.869897 TGTTTGTTTGTTCTTGACGGC 58.130 42.857 0.00 0.00 0.00 5.68
1954 2062 4.499040 GTCATGTTTGTTTGTTCTTGACGG 59.501 41.667 0.00 0.00 0.00 4.79
1955 2063 4.499040 GGTCATGTTTGTTTGTTCTTGACG 59.501 41.667 0.00 0.00 36.51 4.35
1956 2064 5.650543 AGGTCATGTTTGTTTGTTCTTGAC 58.349 37.500 0.00 0.00 35.62 3.18
1957 2065 5.913137 AGGTCATGTTTGTTTGTTCTTGA 57.087 34.783 0.00 0.00 0.00 3.02
1958 2066 6.813152 AGAAAGGTCATGTTTGTTTGTTCTTG 59.187 34.615 0.00 0.00 0.00 3.02
1959 2067 6.935167 AGAAAGGTCATGTTTGTTTGTTCTT 58.065 32.000 0.00 0.00 0.00 2.52
1960 2068 6.530019 AGAAAGGTCATGTTTGTTTGTTCT 57.470 33.333 0.00 0.00 0.00 3.01
1961 2069 8.696410 TTTAGAAAGGTCATGTTTGTTTGTTC 57.304 30.769 0.00 0.00 0.00 3.18
1962 2070 9.665719 ATTTTAGAAAGGTCATGTTTGTTTGTT 57.334 25.926 0.00 0.00 0.00 2.83
1963 2071 9.665719 AATTTTAGAAAGGTCATGTTTGTTTGT 57.334 25.926 0.00 0.00 0.00 2.83
1967 2075 9.108284 CCAAAATTTTAGAAAGGTCATGTTTGT 57.892 29.630 2.44 0.00 0.00 2.83
1968 2076 9.108284 ACCAAAATTTTAGAAAGGTCATGTTTG 57.892 29.630 2.44 0.00 0.00 2.93
1969 2077 9.325198 GACCAAAATTTTAGAAAGGTCATGTTT 57.675 29.630 22.91 0.00 42.65 2.83
1970 2078 7.651704 CGACCAAAATTTTAGAAAGGTCATGTT 59.348 33.333 25.30 2.04 43.12 2.71
1971 2079 7.145323 CGACCAAAATTTTAGAAAGGTCATGT 58.855 34.615 25.30 2.58 43.12 3.21
1972 2080 6.089417 GCGACCAAAATTTTAGAAAGGTCATG 59.911 38.462 25.30 16.45 43.12 3.07
1973 2081 6.156519 GCGACCAAAATTTTAGAAAGGTCAT 58.843 36.000 25.30 3.14 43.12 3.06
1974 2082 5.067936 TGCGACCAAAATTTTAGAAAGGTCA 59.932 36.000 25.30 12.92 43.12 4.02
1975 2083 5.525199 TGCGACCAAAATTTTAGAAAGGTC 58.475 37.500 19.96 19.96 40.39 3.85
1976 2084 5.300792 TCTGCGACCAAAATTTTAGAAAGGT 59.699 36.000 9.07 9.07 0.00 3.50
1977 2085 5.768317 TCTGCGACCAAAATTTTAGAAAGG 58.232 37.500 2.44 2.98 0.00 3.11
1978 2086 7.308435 AGATCTGCGACCAAAATTTTAGAAAG 58.692 34.615 2.44 0.00 0.00 2.62
1979 2087 7.174946 AGAGATCTGCGACCAAAATTTTAGAAA 59.825 33.333 0.00 0.00 0.00 2.52
1980 2088 6.655003 AGAGATCTGCGACCAAAATTTTAGAA 59.345 34.615 0.00 0.00 0.00 2.10
1981 2089 6.173339 AGAGATCTGCGACCAAAATTTTAGA 58.827 36.000 0.00 2.32 0.00 2.10
1982 2090 6.428385 AGAGATCTGCGACCAAAATTTTAG 57.572 37.500 0.00 0.00 0.00 1.85
1983 2091 8.397906 CAATAGAGATCTGCGACCAAAATTTTA 58.602 33.333 0.00 0.00 0.00 1.52
1984 2092 7.121168 TCAATAGAGATCTGCGACCAAAATTTT 59.879 33.333 0.00 0.00 0.00 1.82
1985 2093 6.599244 TCAATAGAGATCTGCGACCAAAATTT 59.401 34.615 0.00 0.00 0.00 1.82
1986 2094 6.037610 GTCAATAGAGATCTGCGACCAAAATT 59.962 38.462 0.00 0.00 0.00 1.82
1987 2095 5.525378 GTCAATAGAGATCTGCGACCAAAAT 59.475 40.000 0.00 0.00 0.00 1.82
1988 2096 4.870426 GTCAATAGAGATCTGCGACCAAAA 59.130 41.667 0.00 0.00 0.00 2.44
1989 2097 4.433615 GTCAATAGAGATCTGCGACCAAA 58.566 43.478 0.00 0.00 0.00 3.28
1990 2098 3.181475 GGTCAATAGAGATCTGCGACCAA 60.181 47.826 0.00 0.00 38.57 3.67
1991 2099 2.362397 GGTCAATAGAGATCTGCGACCA 59.638 50.000 0.00 0.00 38.57 4.02
1992 2100 2.362397 TGGTCAATAGAGATCTGCGACC 59.638 50.000 0.00 9.09 38.88 4.79
1993 2101 3.717400 TGGTCAATAGAGATCTGCGAC 57.283 47.619 0.00 0.00 0.00 5.19
1994 2102 4.736126 TTTGGTCAATAGAGATCTGCGA 57.264 40.909 0.00 0.00 0.00 5.10
1995 2103 5.998454 ATTTTGGTCAATAGAGATCTGCG 57.002 39.130 0.00 0.00 0.00 5.18
1996 2104 8.403606 CAAAATTTTGGTCAATAGAGATCTGC 57.596 34.615 21.00 0.00 34.59 4.26
2026 2134 3.879892 GCTCAGAGAAATGGGTAATGACC 59.120 47.826 0.00 0.00 46.13 4.02
2027 2135 3.879892 GGCTCAGAGAAATGGGTAATGAC 59.120 47.826 0.00 0.00 0.00 3.06
2028 2136 3.523157 TGGCTCAGAGAAATGGGTAATGA 59.477 43.478 0.00 0.00 0.00 2.57
2029 2137 3.629398 GTGGCTCAGAGAAATGGGTAATG 59.371 47.826 0.00 0.00 0.00 1.90
2030 2138 3.266772 TGTGGCTCAGAGAAATGGGTAAT 59.733 43.478 0.00 0.00 0.00 1.89
2031 2139 2.642311 TGTGGCTCAGAGAAATGGGTAA 59.358 45.455 0.00 0.00 0.00 2.85
2032 2140 2.265367 TGTGGCTCAGAGAAATGGGTA 58.735 47.619 0.00 0.00 0.00 3.69
2033 2141 1.067295 TGTGGCTCAGAGAAATGGGT 58.933 50.000 0.00 0.00 0.00 4.51
2034 2142 2.431954 ATGTGGCTCAGAGAAATGGG 57.568 50.000 0.00 0.00 0.00 4.00
2035 2143 3.135348 TCCTATGTGGCTCAGAGAAATGG 59.865 47.826 12.39 0.00 37.55 3.16
2036 2144 4.412796 TCCTATGTGGCTCAGAGAAATG 57.587 45.455 12.39 0.00 37.55 2.32
2037 2145 4.906664 AGATCCTATGTGGCTCAGAGAAAT 59.093 41.667 12.39 5.90 37.55 2.17
2038 2146 4.100653 CAGATCCTATGTGGCTCAGAGAAA 59.899 45.833 12.39 1.44 37.55 2.52
2039 2147 3.640498 CAGATCCTATGTGGCTCAGAGAA 59.360 47.826 12.39 0.00 37.55 2.87
2040 2148 3.117360 TCAGATCCTATGTGGCTCAGAGA 60.117 47.826 12.39 1.17 37.55 3.10
2041 2149 3.229293 TCAGATCCTATGTGGCTCAGAG 58.771 50.000 4.29 4.29 33.57 3.35
2042 2150 3.319031 TCAGATCCTATGTGGCTCAGA 57.681 47.619 0.00 0.00 33.57 3.27
2043 2151 3.324268 ACATCAGATCCTATGTGGCTCAG 59.676 47.826 9.19 0.00 35.06 3.35
2044 2152 3.070590 CACATCAGATCCTATGTGGCTCA 59.929 47.826 21.95 0.00 45.94 4.26
2045 2153 3.661944 CACATCAGATCCTATGTGGCTC 58.338 50.000 21.95 0.00 45.94 4.70
2046 2154 3.766068 CACATCAGATCCTATGTGGCT 57.234 47.619 21.95 0.00 45.94 4.75
2050 2158 4.262808 GCTTAGCCACATCAGATCCTATGT 60.263 45.833 5.00 5.00 36.78 2.29
2051 2159 4.020396 AGCTTAGCCACATCAGATCCTATG 60.020 45.833 0.00 3.86 0.00 2.23
2052 2160 4.020396 CAGCTTAGCCACATCAGATCCTAT 60.020 45.833 0.00 0.00 0.00 2.57
2053 2161 3.323115 CAGCTTAGCCACATCAGATCCTA 59.677 47.826 0.00 0.00 0.00 2.94
2054 2162 2.104451 CAGCTTAGCCACATCAGATCCT 59.896 50.000 0.00 0.00 0.00 3.24
2055 2163 2.103771 TCAGCTTAGCCACATCAGATCC 59.896 50.000 0.00 0.00 0.00 3.36
2056 2164 3.129871 GTCAGCTTAGCCACATCAGATC 58.870 50.000 0.00 0.00 0.00 2.75
2057 2165 2.482664 CGTCAGCTTAGCCACATCAGAT 60.483 50.000 0.00 0.00 0.00 2.90
2058 2166 1.134995 CGTCAGCTTAGCCACATCAGA 60.135 52.381 0.00 0.00 0.00 3.27
2059 2167 1.284657 CGTCAGCTTAGCCACATCAG 58.715 55.000 0.00 0.00 0.00 2.90
2060 2168 0.608130 ACGTCAGCTTAGCCACATCA 59.392 50.000 0.00 0.00 0.00 3.07
2061 2169 1.002366 CACGTCAGCTTAGCCACATC 58.998 55.000 0.00 0.00 0.00 3.06
2062 2170 0.391661 CCACGTCAGCTTAGCCACAT 60.392 55.000 0.00 0.00 0.00 3.21
2063 2171 1.005037 CCACGTCAGCTTAGCCACA 60.005 57.895 0.00 0.00 0.00 4.17
2064 2172 2.391389 GCCACGTCAGCTTAGCCAC 61.391 63.158 0.00 0.00 0.00 5.01
2065 2173 2.047274 GCCACGTCAGCTTAGCCA 60.047 61.111 0.00 0.00 0.00 4.75
2066 2174 1.026718 AATGCCACGTCAGCTTAGCC 61.027 55.000 0.00 0.00 0.00 3.93
2067 2175 0.097674 CAATGCCACGTCAGCTTAGC 59.902 55.000 8.45 0.00 0.00 3.09
2068 2176 0.097674 GCAATGCCACGTCAGCTTAG 59.902 55.000 8.45 0.22 0.00 2.18
2069 2177 0.321564 AGCAATGCCACGTCAGCTTA 60.322 50.000 0.00 0.00 0.00 3.09
2070 2178 0.321564 TAGCAATGCCACGTCAGCTT 60.322 50.000 0.00 0.00 33.83 3.74
2071 2179 0.742281 CTAGCAATGCCACGTCAGCT 60.742 55.000 0.00 3.08 36.20 4.24
2072 2180 1.021390 ACTAGCAATGCCACGTCAGC 61.021 55.000 0.00 0.04 0.00 4.26
2073 2181 0.723414 CACTAGCAATGCCACGTCAG 59.277 55.000 0.00 0.00 0.00 3.51
2074 2182 0.320050 TCACTAGCAATGCCACGTCA 59.680 50.000 0.00 0.00 0.00 4.35
2075 2183 0.721718 GTCACTAGCAATGCCACGTC 59.278 55.000 0.00 0.00 0.00 4.34
2076 2184 0.673644 GGTCACTAGCAATGCCACGT 60.674 55.000 0.00 0.00 0.00 4.49
2077 2185 0.673333 TGGTCACTAGCAATGCCACG 60.673 55.000 0.00 0.00 0.00 4.94
2078 2186 1.533625 TTGGTCACTAGCAATGCCAC 58.466 50.000 0.00 0.00 38.15 5.01
2079 2187 2.284754 TTTGGTCACTAGCAATGCCA 57.715 45.000 0.00 0.00 42.37 4.92
2080 2188 2.754552 TCATTTGGTCACTAGCAATGCC 59.245 45.455 0.00 0.00 42.37 4.40
2081 2189 4.439305 TTCATTTGGTCACTAGCAATGC 57.561 40.909 0.00 0.00 42.37 3.56
2082 2190 6.623486 TGATTTCATTTGGTCACTAGCAATG 58.377 36.000 0.00 0.00 42.37 2.82
2083 2191 6.839124 TGATTTCATTTGGTCACTAGCAAT 57.161 33.333 0.00 0.00 42.37 3.56
2084 2192 6.433716 TGATGATTTCATTTGGTCACTAGCAA 59.566 34.615 0.00 0.00 41.20 3.91
2085 2193 5.945191 TGATGATTTCATTTGGTCACTAGCA 59.055 36.000 0.00 0.00 36.57 3.49
2086 2194 6.441093 TGATGATTTCATTTGGTCACTAGC 57.559 37.500 0.00 0.00 36.57 3.42
2099 2207 7.267128 GGGCTGTGAAATTTATGATGATTTCA 58.733 34.615 12.00 12.00 45.15 2.69
2100 2208 6.418819 CGGGCTGTGAAATTTATGATGATTTC 59.581 38.462 0.00 8.33 40.79 2.17
2101 2209 6.096705 TCGGGCTGTGAAATTTATGATGATTT 59.903 34.615 0.00 0.00 0.00 2.17
2102 2210 5.593909 TCGGGCTGTGAAATTTATGATGATT 59.406 36.000 0.00 0.00 0.00 2.57
2103 2211 5.132502 TCGGGCTGTGAAATTTATGATGAT 58.867 37.500 0.00 0.00 0.00 2.45
2104 2212 4.522114 TCGGGCTGTGAAATTTATGATGA 58.478 39.130 0.00 0.00 0.00 2.92
2105 2213 4.898829 TCGGGCTGTGAAATTTATGATG 57.101 40.909 0.00 0.00 0.00 3.07
2106 2214 4.520492 GGATCGGGCTGTGAAATTTATGAT 59.480 41.667 0.00 0.00 0.00 2.45
2107 2215 3.882888 GGATCGGGCTGTGAAATTTATGA 59.117 43.478 0.00 0.00 0.00 2.15
2108 2216 3.631686 TGGATCGGGCTGTGAAATTTATG 59.368 43.478 0.00 0.00 0.00 1.90
2109 2217 3.632145 GTGGATCGGGCTGTGAAATTTAT 59.368 43.478 0.00 0.00 0.00 1.40
2110 2218 3.013921 GTGGATCGGGCTGTGAAATTTA 58.986 45.455 0.00 0.00 0.00 1.40
2111 2219 1.818674 GTGGATCGGGCTGTGAAATTT 59.181 47.619 0.00 0.00 0.00 1.82
2112 2220 1.463674 GTGGATCGGGCTGTGAAATT 58.536 50.000 0.00 0.00 0.00 1.82
2113 2221 0.394352 GGTGGATCGGGCTGTGAAAT 60.394 55.000 0.00 0.00 0.00 2.17
2114 2222 1.002624 GGTGGATCGGGCTGTGAAA 60.003 57.895 0.00 0.00 0.00 2.69
2115 2223 1.773856 TTGGTGGATCGGGCTGTGAA 61.774 55.000 0.00 0.00 0.00 3.18
2116 2224 1.561769 ATTGGTGGATCGGGCTGTGA 61.562 55.000 0.00 0.00 0.00 3.58
2117 2225 1.077501 ATTGGTGGATCGGGCTGTG 60.078 57.895 0.00 0.00 0.00 3.66
2118 2226 1.224592 GATTGGTGGATCGGGCTGT 59.775 57.895 0.00 0.00 0.00 4.40
2119 2227 0.758734 TAGATTGGTGGATCGGGCTG 59.241 55.000 0.00 0.00 0.00 4.85
2120 2228 1.051812 CTAGATTGGTGGATCGGGCT 58.948 55.000 0.00 0.00 0.00 5.19
2121 2229 0.603975 GCTAGATTGGTGGATCGGGC 60.604 60.000 0.00 0.00 0.00 6.13
2122 2230 0.035458 GGCTAGATTGGTGGATCGGG 59.965 60.000 0.00 0.00 0.00 5.14
2123 2231 1.051812 AGGCTAGATTGGTGGATCGG 58.948 55.000 0.00 0.00 0.00 4.18
2124 2232 2.628178 TGTAGGCTAGATTGGTGGATCG 59.372 50.000 0.00 0.00 0.00 3.69
2125 2233 4.564406 CCATGTAGGCTAGATTGGTGGATC 60.564 50.000 0.66 0.00 0.00 3.36
2126 2234 3.328931 CCATGTAGGCTAGATTGGTGGAT 59.671 47.826 0.66 0.00 0.00 3.41
2127 2235 2.705658 CCATGTAGGCTAGATTGGTGGA 59.294 50.000 0.66 0.00 0.00 4.02
2128 2236 2.224621 CCCATGTAGGCTAGATTGGTGG 60.225 54.545 12.26 7.62 35.39 4.61
2129 2237 3.131709 CCCATGTAGGCTAGATTGGTG 57.868 52.381 12.26 0.00 35.39 4.17
2149 2257 6.358974 AATAAAATATGTATTGGGCCAGGC 57.641 37.500 6.23 1.26 0.00 4.85
2178 2286 8.945057 GCATCAACCCATACAAATTAAACATTT 58.055 29.630 0.00 0.00 0.00 2.32
2179 2287 8.099537 TGCATCAACCCATACAAATTAAACATT 58.900 29.630 0.00 0.00 0.00 2.71
2180 2288 7.619050 TGCATCAACCCATACAAATTAAACAT 58.381 30.769 0.00 0.00 0.00 2.71
2181 2289 6.997655 TGCATCAACCCATACAAATTAAACA 58.002 32.000 0.00 0.00 0.00 2.83
2182 2290 8.491331 AATGCATCAACCCATACAAATTAAAC 57.509 30.769 0.00 0.00 0.00 2.01
2186 2294 9.683870 AAAATAATGCATCAACCCATACAAATT 57.316 25.926 0.00 0.00 0.00 1.82
2187 2295 9.111613 CAAAATAATGCATCAACCCATACAAAT 57.888 29.630 0.00 0.00 0.00 2.32
2188 2296 8.099537 ACAAAATAATGCATCAACCCATACAAA 58.900 29.630 0.00 0.00 0.00 2.83
2189 2297 7.619050 ACAAAATAATGCATCAACCCATACAA 58.381 30.769 0.00 0.00 0.00 2.41
2190 2298 7.093596 TGACAAAATAATGCATCAACCCATACA 60.094 33.333 0.00 0.00 0.00 2.29
2191 2299 7.264221 TGACAAAATAATGCATCAACCCATAC 58.736 34.615 0.00 0.00 0.00 2.39
2192 2300 7.341512 TCTGACAAAATAATGCATCAACCCATA 59.658 33.333 0.00 0.00 0.00 2.74
2193 2301 6.154877 TCTGACAAAATAATGCATCAACCCAT 59.845 34.615 0.00 0.00 0.00 4.00
2194 2302 5.479724 TCTGACAAAATAATGCATCAACCCA 59.520 36.000 0.00 0.00 0.00 4.51
2195 2303 5.964758 TCTGACAAAATAATGCATCAACCC 58.035 37.500 0.00 0.00 0.00 4.11
2196 2304 6.035327 GCTTCTGACAAAATAATGCATCAACC 59.965 38.462 0.00 0.00 0.00 3.77
2197 2305 6.587226 TGCTTCTGACAAAATAATGCATCAAC 59.413 34.615 0.00 0.00 0.00 3.18
2198 2306 6.689554 TGCTTCTGACAAAATAATGCATCAA 58.310 32.000 0.00 0.00 0.00 2.57
2199 2307 6.270156 TGCTTCTGACAAAATAATGCATCA 57.730 33.333 0.00 0.00 0.00 3.07
2200 2308 6.292168 GCATGCTTCTGACAAAATAATGCATC 60.292 38.462 11.37 0.00 38.18 3.91
2201 2309 5.522460 GCATGCTTCTGACAAAATAATGCAT 59.478 36.000 11.37 0.00 38.18 3.96
2202 2310 4.865925 GCATGCTTCTGACAAAATAATGCA 59.134 37.500 11.37 0.00 38.18 3.96
2203 2311 4.865925 TGCATGCTTCTGACAAAATAATGC 59.134 37.500 20.33 0.00 38.63 3.56
2204 2312 8.812147 ATATGCATGCTTCTGACAAAATAATG 57.188 30.769 20.33 0.00 0.00 1.90
2207 2315 9.287373 TGATATATGCATGCTTCTGACAAAATA 57.713 29.630 20.33 4.41 0.00 1.40
2208 2316 8.173542 TGATATATGCATGCTTCTGACAAAAT 57.826 30.769 20.33 2.05 0.00 1.82
2209 2317 7.571080 TGATATATGCATGCTTCTGACAAAA 57.429 32.000 20.33 0.00 0.00 2.44
2210 2318 7.499895 TCTTGATATATGCATGCTTCTGACAAA 59.500 33.333 20.33 4.17 0.00 2.83
2211 2319 6.993902 TCTTGATATATGCATGCTTCTGACAA 59.006 34.615 20.33 16.02 0.00 3.18
2212 2320 6.527423 TCTTGATATATGCATGCTTCTGACA 58.473 36.000 20.33 9.80 0.00 3.58
2213 2321 7.612668 ATCTTGATATATGCATGCTTCTGAC 57.387 36.000 20.33 7.31 0.00 3.51
2214 2322 7.985752 CCTATCTTGATATATGCATGCTTCTGA 59.014 37.037 20.33 0.00 0.00 3.27
2215 2323 7.254829 GCCTATCTTGATATATGCATGCTTCTG 60.255 40.741 20.33 6.01 0.00 3.02
2216 2324 6.766944 GCCTATCTTGATATATGCATGCTTCT 59.233 38.462 20.33 7.98 0.00 2.85
2217 2325 6.017275 GGCCTATCTTGATATATGCATGCTTC 60.017 42.308 20.33 8.48 0.00 3.86
2218 2326 5.826737 GGCCTATCTTGATATATGCATGCTT 59.173 40.000 20.33 15.55 0.00 3.91
2219 2327 5.374921 GGCCTATCTTGATATATGCATGCT 58.625 41.667 20.33 7.07 0.00 3.79
2220 2328 4.518211 GGGCCTATCTTGATATATGCATGC 59.482 45.833 11.82 11.82 0.00 4.06
2221 2329 5.687780 TGGGCCTATCTTGATATATGCATG 58.312 41.667 10.16 0.00 0.00 4.06
2222 2330 5.981494 TGGGCCTATCTTGATATATGCAT 57.019 39.130 4.53 3.79 0.00 3.96
2223 2331 5.981494 ATGGGCCTATCTTGATATATGCA 57.019 39.130 4.53 0.00 0.00 3.96
2224 2332 8.752005 TTTAATGGGCCTATCTTGATATATGC 57.248 34.615 0.34 0.00 0.00 3.14
2227 2335 9.243105 GCTTTTTAATGGGCCTATCTTGATATA 57.757 33.333 0.34 0.00 0.00 0.86
2228 2336 7.729881 TGCTTTTTAATGGGCCTATCTTGATAT 59.270 33.333 0.34 0.00 0.00 1.63
2229 2337 7.066142 TGCTTTTTAATGGGCCTATCTTGATA 58.934 34.615 0.34 0.00 0.00 2.15
2230 2338 5.898972 TGCTTTTTAATGGGCCTATCTTGAT 59.101 36.000 0.34 0.00 0.00 2.57
2231 2339 5.268387 TGCTTTTTAATGGGCCTATCTTGA 58.732 37.500 0.34 0.00 0.00 3.02
2232 2340 5.596836 TGCTTTTTAATGGGCCTATCTTG 57.403 39.130 0.34 0.00 0.00 3.02
2233 2341 5.721480 ACTTGCTTTTTAATGGGCCTATCTT 59.279 36.000 0.34 0.00 0.00 2.40
2234 2342 5.272402 ACTTGCTTTTTAATGGGCCTATCT 58.728 37.500 0.34 0.00 0.00 1.98
2235 2343 5.598416 ACTTGCTTTTTAATGGGCCTATC 57.402 39.130 0.34 0.00 0.00 2.08
2236 2344 5.955355 TGTACTTGCTTTTTAATGGGCCTAT 59.045 36.000 4.53 0.00 0.00 2.57
2237 2345 5.326069 TGTACTTGCTTTTTAATGGGCCTA 58.674 37.500 4.53 0.00 0.00 3.93
2238 2346 4.156477 TGTACTTGCTTTTTAATGGGCCT 58.844 39.130 4.53 0.00 0.00 5.19
2239 2347 4.529109 TGTACTTGCTTTTTAATGGGCC 57.471 40.909 0.00 0.00 0.00 5.80
2240 2348 5.293560 TGTTGTACTTGCTTTTTAATGGGC 58.706 37.500 0.00 0.00 0.00 5.36
2241 2349 7.778470 TTTGTTGTACTTGCTTTTTAATGGG 57.222 32.000 0.00 0.00 0.00 4.00
2251 2359 9.139174 GCAATATTGTATTTTGTTGTACTTGCT 57.861 29.630 16.61 0.00 31.27 3.91
2252 2360 8.920665 TGCAATATTGTATTTTGTTGTACTTGC 58.079 29.630 16.61 0.00 32.98 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.