Multiple sequence alignment - TraesCS3A01G135700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G135700 chr3A 100.000 3569 0 0 1 3569 113343475 113339907 0.000000e+00 6591.0
1 TraesCS3A01G135700 chr3A 82.107 693 120 4 1093 1783 542202773 542203463 1.100000e-164 590.0
2 TraesCS3A01G135700 chr3A 96.465 198 7 0 3372 3569 46298722 46298525 9.550000e-86 327.0
3 TraesCS3A01G135700 chr3A 96.465 198 7 0 3372 3569 700912873 700912676 9.550000e-86 327.0
4 TraesCS3A01G135700 chr3A 79.771 262 49 4 1440 1699 686863626 686863885 1.690000e-43 187.0
5 TraesCS3A01G135700 chr3B 90.802 3066 159 51 1 3006 146184223 146181221 0.000000e+00 3986.0
6 TraesCS3A01G135700 chr3B 79.389 262 50 4 1440 1699 729415073 729415332 7.870000e-42 182.0
7 TraesCS3A01G135700 chr3B 83.571 140 23 0 3176 3315 723494959 723495098 8.040000e-27 132.0
8 TraesCS3A01G135700 chr3B 97.297 37 1 0 3141 3177 475827825 475827789 2.970000e-06 63.9
9 TraesCS3A01G135700 chr3D 91.556 2404 109 50 643 3006 95246941 95244592 0.000000e+00 3229.0
10 TraesCS3A01G135700 chr3D 86.458 672 56 20 1 655 95247609 95246956 0.000000e+00 704.0
11 TraesCS3A01G135700 chr3D 79.771 262 49 4 1440 1699 549705406 549705665 1.690000e-43 187.0
12 TraesCS3A01G135700 chr1A 82.503 743 121 8 1090 1828 521629150 521629887 0.000000e+00 643.0
13 TraesCS3A01G135700 chr1D 83.871 651 97 7 1137 1783 426587031 426587677 6.550000e-172 614.0
14 TraesCS3A01G135700 chr1B 82.565 694 115 6 1093 1783 576205534 576206224 1.100000e-169 606.0
15 TraesCS3A01G135700 chr1B 85.315 143 20 1 3173 3315 648795815 648795956 2.870000e-31 147.0
16 TraesCS3A01G135700 chr1B 86.441 118 15 1 3198 3315 493854757 493854641 1.040000e-25 128.0
17 TraesCS3A01G135700 chr1B 83.607 122 20 0 3194 3315 28036676 28036555 8.100000e-22 115.0
18 TraesCS3A01G135700 chr5A 98.477 197 3 0 3373 3569 409310750 409310946 7.330000e-92 348.0
19 TraesCS3A01G135700 chr2A 97.970 197 4 0 3373 3569 615211304 615211500 3.410000e-90 342.0
20 TraesCS3A01G135700 chr2A 97.475 198 5 0 3372 3569 576494438 576494635 4.410000e-89 339.0
21 TraesCS3A01G135700 chr2A 97.938 194 4 0 3376 3569 763713182 763713375 1.590000e-88 337.0
22 TraesCS3A01G135700 chr2A 96.954 197 6 0 3373 3569 344783244 344783048 7.390000e-87 331.0
23 TraesCS3A01G135700 chr6A 97.959 196 4 0 3374 3569 608303396 608303591 1.230000e-89 340.0
24 TraesCS3A01G135700 chr6A 96.954 197 6 0 3373 3569 310096918 310097114 7.390000e-87 331.0
25 TraesCS3A01G135700 chr7A 86.014 143 20 0 3173 3315 727851143 727851285 1.720000e-33 154.0
26 TraesCS3A01G135700 chr6B 85.039 127 19 0 3191 3317 215854870 215854744 2.890000e-26 130.0
27 TraesCS3A01G135700 chr6B 94.000 50 3 0 3128 3177 36774473 36774522 3.820000e-10 76.8
28 TraesCS3A01G135700 chr5D 86.842 114 15 0 3202 3315 106810052 106809939 1.040000e-25 128.0
29 TraesCS3A01G135700 chr5B 84.252 127 20 0 3191 3317 366557888 366558014 1.350000e-24 124.0
30 TraesCS3A01G135700 chr4A 90.541 74 7 0 3236 3309 610618175 610618248 8.150000e-17 99.0
31 TraesCS3A01G135700 chr2D 92.000 50 4 0 3128 3177 11510619 11510570 1.780000e-08 71.3
32 TraesCS3A01G135700 chrUn 93.023 43 3 0 3133 3175 8747448 8747490 2.970000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G135700 chr3A 113339907 113343475 3568 True 6591.0 6591 100.000 1 3569 1 chr3A.!!$R2 3568
1 TraesCS3A01G135700 chr3A 542202773 542203463 690 False 590.0 590 82.107 1093 1783 1 chr3A.!!$F1 690
2 TraesCS3A01G135700 chr3B 146181221 146184223 3002 True 3986.0 3986 90.802 1 3006 1 chr3B.!!$R1 3005
3 TraesCS3A01G135700 chr3D 95244592 95247609 3017 True 1966.5 3229 89.007 1 3006 2 chr3D.!!$R1 3005
4 TraesCS3A01G135700 chr1A 521629150 521629887 737 False 643.0 643 82.503 1090 1828 1 chr1A.!!$F1 738
5 TraesCS3A01G135700 chr1D 426587031 426587677 646 False 614.0 614 83.871 1137 1783 1 chr1D.!!$F1 646
6 TraesCS3A01G135700 chr1B 576205534 576206224 690 False 606.0 606 82.565 1093 1783 1 chr1B.!!$F1 690

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
21 22 0.107459 GGCTCCGAAGAATCCTTGCT 60.107 55.0 0.0 0.0 31.62 3.91 F
992 1076 0.249073 ATCGGATTCTTGCTCGTCGG 60.249 55.0 0.0 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1840 1924 0.463116 TCCATGATCTCGTCGACGGA 60.463 55.0 35.05 29.10 40.29 4.69 R
2681 2781 0.106894 TTGTGGCGTGACATGTACCA 59.893 50.0 0.00 1.43 0.00 3.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.946745 GAGGCTCCGAAGAATCCTTG 58.053 55.000 2.15 0.00 31.62 3.61
21 22 0.107459 GGCTCCGAAGAATCCTTGCT 60.107 55.000 0.00 0.00 31.62 3.91
25 26 3.493350 GCTCCGAAGAATCCTTGCTCATA 60.493 47.826 0.00 0.00 31.62 2.15
76 77 7.330318 CAACGTGTGAGAAATATATGAACTCG 58.670 38.462 0.00 0.00 0.00 4.18
91 93 2.201921 ACTCGGAGTTAGACTGCTCA 57.798 50.000 4.45 0.00 34.11 4.26
92 94 2.729194 ACTCGGAGTTAGACTGCTCAT 58.271 47.619 4.45 0.00 34.11 2.90
93 95 3.887352 ACTCGGAGTTAGACTGCTCATA 58.113 45.455 4.45 0.00 34.11 2.15
94 96 4.465886 ACTCGGAGTTAGACTGCTCATAT 58.534 43.478 4.45 0.00 34.11 1.78
205 210 1.202710 TCTAAGGACGCTGTGCCAAAA 60.203 47.619 4.87 0.00 0.00 2.44
255 266 4.058797 GTGACCCACCAACCTTCG 57.941 61.111 0.00 0.00 0.00 3.79
301 312 5.021033 TGTGCCTGTCAAATGTTGAAATT 57.979 34.783 0.00 0.00 42.15 1.82
302 313 5.049167 TGTGCCTGTCAAATGTTGAAATTC 58.951 37.500 0.00 0.00 42.15 2.17
303 314 4.148696 GTGCCTGTCAAATGTTGAAATTCG 59.851 41.667 0.00 0.00 42.15 3.34
334 346 1.964552 CCATCTGGTCCAATCAGAGC 58.035 55.000 0.00 0.00 43.45 4.09
377 389 4.706476 TCCATCCAATTGTCAAATGAGGAC 59.294 41.667 4.43 0.00 35.05 3.85
381 393 4.022068 TCCAATTGTCAAATGAGGACTTGC 60.022 41.667 4.43 0.00 36.26 4.01
395 407 7.807977 TGAGGACTTGCCATCTAATTATTTC 57.192 36.000 0.00 0.00 40.02 2.17
401 413 4.062293 TGCCATCTAATTATTTCCCGACG 58.938 43.478 0.00 0.00 0.00 5.12
435 448 3.190118 CCATCACAGCAGAAAAGAGAACC 59.810 47.826 0.00 0.00 0.00 3.62
441 454 3.885297 CAGCAGAAAAGAGAACCCTGAAA 59.115 43.478 0.00 0.00 0.00 2.69
470 483 7.795047 TCATCTGCAGATCAAAATCCTTACTA 58.205 34.615 26.44 0.00 31.21 1.82
471 484 7.712639 TCATCTGCAGATCAAAATCCTTACTAC 59.287 37.037 26.44 0.00 31.21 2.73
472 485 7.187824 TCTGCAGATCAAAATCCTTACTACT 57.812 36.000 13.74 0.00 31.78 2.57
475 488 6.127451 TGCAGATCAAAATCCTTACTACTCGA 60.127 38.462 0.00 0.00 31.78 4.04
495 508 2.658593 CCGACGGCCAAGATAGCG 60.659 66.667 2.24 0.00 0.00 4.26
507 528 3.675225 CCAAGATAGCGTCATAATCCACG 59.325 47.826 0.00 0.00 39.09 4.94
524 545 0.528924 ACGAATGAACGGTCGGATCA 59.471 50.000 0.00 4.21 41.56 2.92
540 561 2.609984 GGATCAGCCGTCTCATCATCAG 60.610 54.545 0.00 0.00 0.00 2.90
552 573 4.883585 TCTCATCATCAGTGCCCAAATTAC 59.116 41.667 0.00 0.00 0.00 1.89
562 583 3.135895 GTGCCCAAATTACCTCTAGGCTA 59.864 47.826 0.00 0.00 39.68 3.93
576 598 6.435904 ACCTCTAGGCTATCACATATTCAGAC 59.564 42.308 0.00 0.00 39.32 3.51
583 605 6.989169 GGCTATCACATATTCAGACACTCTTT 59.011 38.462 0.00 0.00 0.00 2.52
584 606 7.170658 GGCTATCACATATTCAGACACTCTTTC 59.829 40.741 0.00 0.00 0.00 2.62
585 607 7.925483 GCTATCACATATTCAGACACTCTTTCT 59.075 37.037 0.00 0.00 0.00 2.52
589 611 9.342308 TCACATATTCAGACACTCTTTCTTTTT 57.658 29.630 0.00 0.00 0.00 1.94
613 635 4.808364 TGTAGAATTTGCCTTTTTGCACAC 59.192 37.500 0.00 0.00 41.88 3.82
657 706 7.173863 TGACTTGAGAACACGAAAACTTATC 57.826 36.000 0.00 0.00 0.00 1.75
669 718 4.660465 CGAAAACTTATCTGCGCGTTAATC 59.340 41.667 8.43 1.64 0.00 1.75
701 752 9.211485 CAATGGAGTAAAGAAATGCAAAATCTT 57.789 29.630 0.00 0.00 35.00 2.40
723 774 3.408634 ACCAATAAGAACTGTTCACGGG 58.591 45.455 21.50 16.10 0.00 5.28
807 868 1.878953 TTTCTTCAGAGTCCAACGCC 58.121 50.000 0.00 0.00 0.00 5.68
839 907 3.325135 AGTCCTCGGGGCATCTATTTAAG 59.675 47.826 0.00 0.00 0.00 1.85
889 971 2.025887 TCCTCTCCTCCCATTCTTTTGC 60.026 50.000 0.00 0.00 0.00 3.68
936 1019 1.760029 AGGAAATTCTCTCCTCTCGGC 59.240 52.381 0.00 0.00 39.16 5.54
975 1059 5.262714 GCTAGCTAGCGAATTCTTTCATC 57.737 43.478 28.89 0.00 39.82 2.92
976 1060 4.143431 GCTAGCTAGCGAATTCTTTCATCG 60.143 45.833 28.89 0.00 39.82 3.84
992 1076 0.249073 ATCGGATTCTTGCTCGTCGG 60.249 55.000 0.00 0.00 0.00 4.79
1123 1207 4.097361 GGTTCGAGGTGGGGAGGC 62.097 72.222 0.00 0.00 0.00 4.70
1860 1944 0.040870 CCGTCGACGAGATCATGGAG 60.041 60.000 37.65 13.95 43.02 3.86
1926 2010 2.637383 GGACGACCGCTCCTTCACT 61.637 63.158 0.00 0.00 0.00 3.41
2028 2112 2.887568 GACGCCACCGATCAGCAG 60.888 66.667 0.00 0.00 38.29 4.24
2031 2115 3.200593 GCCACCGATCAGCAGCAG 61.201 66.667 0.00 0.00 0.00 4.24
2038 2122 1.332997 CCGATCAGCAGCAGAAAATCC 59.667 52.381 0.00 0.00 0.00 3.01
2043 2127 3.068729 GCAGCAGAAAATCCCGGGC 62.069 63.158 18.49 0.00 0.00 6.13
2589 2673 3.442167 TGCCGTCCATGCATGCAC 61.442 61.111 25.37 16.36 32.85 4.57
2595 2679 4.105733 CCATGCATGCACGCACGT 62.106 61.111 25.37 2.19 46.56 4.49
2596 2680 2.574999 CATGCATGCACGCACGTC 60.575 61.111 25.37 0.00 46.56 4.34
2597 2681 2.743538 ATGCATGCACGCACGTCT 60.744 55.556 25.37 0.38 46.56 4.18
2598 2682 3.030763 ATGCATGCACGCACGTCTG 62.031 57.895 25.37 0.00 46.56 3.51
2600 2684 3.417224 CATGCACGCACGTCTGCT 61.417 61.111 9.99 0.00 41.77 4.24
2606 2698 1.951130 ACGCACGTCTGCTTGACTG 60.951 57.895 8.36 7.00 43.25 3.51
2615 2707 2.164624 GTCTGCTTGACTGGTCGTCTAT 59.835 50.000 3.72 0.00 43.25 1.98
2637 2729 1.142314 GCGTCCGTATACTTGGCCA 59.858 57.895 0.00 0.00 0.00 5.36
2641 2741 2.555325 CGTCCGTATACTTGGCCATAGA 59.445 50.000 6.09 0.00 0.00 1.98
2647 2747 4.217767 CGTATACTTGGCCATAGAGCTGTA 59.782 45.833 6.09 0.00 0.00 2.74
2654 2754 2.100252 GGCCATAGAGCTGTACGTACAA 59.900 50.000 27.16 13.99 35.50 2.41
2655 2755 3.243771 GGCCATAGAGCTGTACGTACAAT 60.244 47.826 27.16 19.18 35.50 2.71
2656 2756 4.022589 GGCCATAGAGCTGTACGTACAATA 60.023 45.833 27.16 17.58 35.50 1.90
2657 2757 4.916249 GCCATAGAGCTGTACGTACAATAC 59.084 45.833 27.16 19.24 35.50 1.89
2678 2778 4.119334 CGTACGTACGTATATCTGTGCA 57.881 45.455 33.95 3.67 44.13 4.57
2679 2779 4.705492 CGTACGTACGTATATCTGTGCAT 58.295 43.478 33.95 1.37 44.13 3.96
2680 2780 5.846645 CGTACGTACGTATATCTGTGCATA 58.153 41.667 33.95 2.90 44.13 3.14
2681 2781 6.472680 CGTACGTACGTATATCTGTGCATAT 58.527 40.000 33.95 0.24 44.13 1.78
2682 2782 6.407181 CGTACGTACGTATATCTGTGCATATG 59.593 42.308 33.95 7.51 44.13 1.78
2683 2783 5.637809 ACGTACGTATATCTGTGCATATGG 58.362 41.667 21.41 0.00 0.00 2.74
2684 2784 5.182570 ACGTACGTATATCTGTGCATATGGT 59.817 40.000 21.41 0.00 0.00 3.55
2685 2785 6.372381 ACGTACGTATATCTGTGCATATGGTA 59.628 38.462 21.41 0.00 0.00 3.25
2686 2786 6.685828 CGTACGTATATCTGTGCATATGGTAC 59.314 42.308 7.22 3.17 32.82 3.34
2698 2798 4.685447 TGGTACATGTCACGCCAC 57.315 55.556 0.00 0.00 0.00 5.01
2709 2809 1.005347 GTCACGCCACAATACATACGC 60.005 52.381 0.00 0.00 0.00 4.42
2712 2812 1.597195 ACGCCACAATACATACGCATG 59.403 47.619 0.00 0.00 38.21 4.06
2771 2879 3.653664 TTTGGGGCGGTGCTATGGG 62.654 63.158 0.00 0.00 0.00 4.00
2831 2943 6.559157 TGTGTAAAGGGTAAAATGGGGAAATT 59.441 34.615 0.00 0.00 0.00 1.82
2835 2947 4.971661 AGGGTAAAATGGGGAAATTGGAT 58.028 39.130 0.00 0.00 0.00 3.41
2837 2949 4.719273 GGGTAAAATGGGGAAATTGGATGA 59.281 41.667 0.00 0.00 0.00 2.92
2841 2953 4.426736 AATGGGGAAATTGGATGATTGC 57.573 40.909 0.00 0.00 0.00 3.56
2850 2962 9.783081 GGGAAATTGGATGATTGCTAATTAATT 57.217 29.630 5.89 5.89 0.00 1.40
2916 3028 8.969121 TGTTTGATGTTGTTGATGTATGAATC 57.031 30.769 0.00 0.00 0.00 2.52
2918 3030 7.943079 TTGATGTTGTTGATGTATGAATCCT 57.057 32.000 0.00 0.00 0.00 3.24
2925 3037 8.554528 GTTGTTGATGTATGAATCCTCTGTATG 58.445 37.037 0.00 0.00 0.00 2.39
2950 3062 9.243637 TGTTTTGAGAAGGAAATTAATGAAACG 57.756 29.630 0.00 0.00 0.00 3.60
2951 3063 7.867445 TTTGAGAAGGAAATTAATGAAACGC 57.133 32.000 0.00 0.00 0.00 4.84
2954 3066 7.028962 TGAGAAGGAAATTAATGAAACGCATG 58.971 34.615 0.00 0.00 37.28 4.06
2957 3069 6.469782 AGGAAATTAATGAAACGCATGGAT 57.530 33.333 0.00 0.00 37.28 3.41
2958 3070 6.877236 AGGAAATTAATGAAACGCATGGATT 58.123 32.000 0.00 0.00 37.28 3.01
2959 3071 6.980397 AGGAAATTAATGAAACGCATGGATTC 59.020 34.615 0.00 0.00 37.28 2.52
2960 3072 6.980397 GGAAATTAATGAAACGCATGGATTCT 59.020 34.615 0.00 0.00 37.28 2.40
2961 3073 7.492344 GGAAATTAATGAAACGCATGGATTCTT 59.508 33.333 0.00 0.00 37.28 2.52
2962 3074 8.776376 AAATTAATGAAACGCATGGATTCTTT 57.224 26.923 0.00 3.38 37.28 2.52
2963 3075 8.776376 AATTAATGAAACGCATGGATTCTTTT 57.224 26.923 0.00 0.00 37.28 2.27
2964 3076 7.810766 TTAATGAAACGCATGGATTCTTTTC 57.189 32.000 0.00 0.00 37.28 2.29
2965 3077 4.173036 TGAAACGCATGGATTCTTTTCC 57.827 40.909 0.00 0.00 36.24 3.13
2969 3081 4.871933 ACGCATGGATTCTTTTCCTTTT 57.128 36.364 0.00 0.00 36.68 2.27
2996 3108 2.751166 ACATACTCTCACAGCCACAC 57.249 50.000 0.00 0.00 0.00 3.82
3006 3118 4.020307 TCTCACAGCCACACAATCTTCATA 60.020 41.667 0.00 0.00 0.00 2.15
3007 3119 4.847198 TCACAGCCACACAATCTTCATAT 58.153 39.130 0.00 0.00 0.00 1.78
3008 3120 4.637091 TCACAGCCACACAATCTTCATATG 59.363 41.667 0.00 0.00 0.00 1.78
3009 3121 3.379372 ACAGCCACACAATCTTCATATGC 59.621 43.478 0.00 0.00 0.00 3.14
3010 3122 3.630769 CAGCCACACAATCTTCATATGCT 59.369 43.478 0.00 0.00 0.00 3.79
3011 3123 3.881688 AGCCACACAATCTTCATATGCTC 59.118 43.478 0.00 0.00 0.00 4.26
3012 3124 3.004106 GCCACACAATCTTCATATGCTCC 59.996 47.826 0.00 0.00 0.00 4.70
3013 3125 4.201657 CCACACAATCTTCATATGCTCCA 58.798 43.478 0.00 0.00 0.00 3.86
3014 3126 4.641541 CCACACAATCTTCATATGCTCCAA 59.358 41.667 0.00 0.00 0.00 3.53
3015 3127 5.301045 CCACACAATCTTCATATGCTCCAAT 59.699 40.000 0.00 0.00 0.00 3.16
3016 3128 6.487668 CCACACAATCTTCATATGCTCCAATA 59.512 38.462 0.00 0.00 0.00 1.90
3017 3129 7.013559 CCACACAATCTTCATATGCTCCAATAA 59.986 37.037 0.00 0.00 0.00 1.40
3018 3130 8.407832 CACACAATCTTCATATGCTCCAATAAA 58.592 33.333 0.00 0.00 0.00 1.40
3019 3131 8.970020 ACACAATCTTCATATGCTCCAATAAAA 58.030 29.630 0.00 0.00 0.00 1.52
3020 3132 9.806203 CACAATCTTCATATGCTCCAATAAAAA 57.194 29.630 0.00 0.00 0.00 1.94
3043 3155 7.621428 AAAAATCTCCATACACTGATCACTG 57.379 36.000 0.00 0.00 0.00 3.66
3044 3156 5.946942 AATCTCCATACACTGATCACTGT 57.053 39.130 11.94 11.94 0.00 3.55
3045 3157 4.991153 TCTCCATACACTGATCACTGTC 57.009 45.455 10.78 0.00 0.00 3.51
3046 3158 4.344104 TCTCCATACACTGATCACTGTCA 58.656 43.478 10.78 0.79 0.00 3.58
3047 3159 4.772100 TCTCCATACACTGATCACTGTCAA 59.228 41.667 10.78 0.00 0.00 3.18
3048 3160 5.245977 TCTCCATACACTGATCACTGTCAAA 59.754 40.000 10.78 0.00 0.00 2.69
3049 3161 5.237815 TCCATACACTGATCACTGTCAAAC 58.762 41.667 10.78 0.00 0.00 2.93
3050 3162 5.012046 TCCATACACTGATCACTGTCAAACT 59.988 40.000 10.78 0.00 0.00 2.66
3051 3163 5.702670 CCATACACTGATCACTGTCAAACTT 59.297 40.000 10.78 0.00 0.00 2.66
3052 3164 6.873605 CCATACACTGATCACTGTCAAACTTA 59.126 38.462 10.78 0.00 0.00 2.24
3053 3165 7.550551 CCATACACTGATCACTGTCAAACTTAT 59.449 37.037 10.78 0.00 0.00 1.73
3054 3166 6.791887 ACACTGATCACTGTCAAACTTATG 57.208 37.500 2.48 0.00 0.00 1.90
3055 3167 6.291377 ACACTGATCACTGTCAAACTTATGT 58.709 36.000 2.48 0.00 0.00 2.29
3056 3168 6.203530 ACACTGATCACTGTCAAACTTATGTG 59.796 38.462 2.48 2.07 0.00 3.21
3057 3169 6.203530 CACTGATCACTGTCAAACTTATGTGT 59.796 38.462 0.00 0.00 0.00 3.72
3058 3170 6.425114 ACTGATCACTGTCAAACTTATGTGTC 59.575 38.462 0.00 0.00 0.00 3.67
3059 3171 6.287525 TGATCACTGTCAAACTTATGTGTCA 58.712 36.000 0.00 0.00 0.00 3.58
3060 3172 6.936335 TGATCACTGTCAAACTTATGTGTCAT 59.064 34.615 0.00 0.00 0.00 3.06
3061 3173 8.093927 TGATCACTGTCAAACTTATGTGTCATA 58.906 33.333 0.00 0.00 0.00 2.15
3062 3174 7.652300 TCACTGTCAAACTTATGTGTCATAC 57.348 36.000 0.00 0.00 0.00 2.39
3063 3175 7.213678 TCACTGTCAAACTTATGTGTCATACA 58.786 34.615 0.00 0.00 44.87 2.29
3103 3215 8.429739 TTTTATTTCTTTTGCGAATACACTCG 57.570 30.769 0.00 0.00 41.84 4.18
3104 3216 5.607119 ATTTCTTTTGCGAATACACTCGT 57.393 34.783 0.00 0.00 40.99 4.18
3105 3217 6.715344 ATTTCTTTTGCGAATACACTCGTA 57.285 33.333 0.00 0.00 40.99 3.43
3106 3218 5.505165 TTCTTTTGCGAATACACTCGTAC 57.495 39.130 0.00 0.00 40.99 3.67
3107 3219 4.548494 TCTTTTGCGAATACACTCGTACA 58.452 39.130 0.00 0.00 40.99 2.90
3108 3220 5.165676 TCTTTTGCGAATACACTCGTACAT 58.834 37.500 0.00 0.00 40.99 2.29
3109 3221 5.287752 TCTTTTGCGAATACACTCGTACATC 59.712 40.000 0.00 0.00 40.99 3.06
3110 3222 3.768468 TGCGAATACACTCGTACATCA 57.232 42.857 0.00 0.00 40.99 3.07
3111 3223 4.099380 TGCGAATACACTCGTACATCAA 57.901 40.909 0.00 0.00 40.99 2.57
3112 3224 4.678622 TGCGAATACACTCGTACATCAAT 58.321 39.130 0.00 0.00 40.99 2.57
3113 3225 5.823353 TGCGAATACACTCGTACATCAATA 58.177 37.500 0.00 0.00 40.99 1.90
3114 3226 6.443792 TGCGAATACACTCGTACATCAATAT 58.556 36.000 0.00 0.00 40.99 1.28
3115 3227 6.362283 TGCGAATACACTCGTACATCAATATG 59.638 38.462 0.00 0.00 40.99 1.78
3116 3228 6.581166 GCGAATACACTCGTACATCAATATGA 59.419 38.462 0.00 0.00 40.99 2.15
3117 3229 7.273598 GCGAATACACTCGTACATCAATATGAT 59.726 37.037 0.00 0.00 40.99 2.45
3118 3230 9.769093 CGAATACACTCGTACATCAATATGATA 57.231 33.333 0.00 0.00 33.05 2.15
3124 3236 9.723447 CACTCGTACATCAATATGATATACTCC 57.277 37.037 7.08 0.00 35.28 3.85
3125 3237 9.688091 ACTCGTACATCAATATGATATACTCCT 57.312 33.333 7.08 0.00 35.28 3.69
3145 3257 8.336801 ACTCCTTTAAGGTTAGCATAAAGTTG 57.663 34.615 11.13 10.61 35.73 3.16
3146 3258 8.161425 ACTCCTTTAAGGTTAGCATAAAGTTGA 58.839 33.333 11.13 7.67 35.73 3.18
3147 3259 8.561738 TCCTTTAAGGTTAGCATAAAGTTGAG 57.438 34.615 11.13 3.74 35.73 3.02
3148 3260 7.120726 TCCTTTAAGGTTAGCATAAAGTTGAGC 59.879 37.037 11.13 0.00 35.73 4.26
3149 3261 6.753107 TTAAGGTTAGCATAAAGTTGAGCC 57.247 37.500 0.00 0.00 0.00 4.70
3150 3262 4.301072 AGGTTAGCATAAAGTTGAGCCA 57.699 40.909 0.00 0.00 0.00 4.75
3151 3263 4.860022 AGGTTAGCATAAAGTTGAGCCAT 58.140 39.130 0.00 0.00 0.00 4.40
3152 3264 4.884164 AGGTTAGCATAAAGTTGAGCCATC 59.116 41.667 0.00 0.00 0.00 3.51
3153 3265 4.884164 GGTTAGCATAAAGTTGAGCCATCT 59.116 41.667 0.00 0.00 0.00 2.90
3154 3266 6.055588 GGTTAGCATAAAGTTGAGCCATCTA 58.944 40.000 0.00 0.00 0.00 1.98
3155 3267 6.712547 GGTTAGCATAAAGTTGAGCCATCTAT 59.287 38.462 0.00 0.00 0.00 1.98
3156 3268 7.229506 GGTTAGCATAAAGTTGAGCCATCTATT 59.770 37.037 0.00 0.00 0.00 1.73
3157 3269 8.624776 GTTAGCATAAAGTTGAGCCATCTATTT 58.375 33.333 0.00 0.00 0.00 1.40
3158 3270 7.651027 AGCATAAAGTTGAGCCATCTATTTT 57.349 32.000 0.00 0.00 0.00 1.82
3159 3271 7.486647 AGCATAAAGTTGAGCCATCTATTTTG 58.513 34.615 0.00 0.00 0.00 2.44
3160 3272 7.340232 AGCATAAAGTTGAGCCATCTATTTTGA 59.660 33.333 0.00 0.00 0.00 2.69
3161 3273 7.975616 GCATAAAGTTGAGCCATCTATTTTGAA 59.024 33.333 0.00 0.00 0.00 2.69
3162 3274 9.859427 CATAAAGTTGAGCCATCTATTTTGAAA 57.141 29.630 0.00 0.00 0.00 2.69
3163 3275 9.860898 ATAAAGTTGAGCCATCTATTTTGAAAC 57.139 29.630 0.00 0.00 0.00 2.78
3164 3276 5.942872 AGTTGAGCCATCTATTTTGAAACG 58.057 37.500 0.00 0.00 0.00 3.60
3165 3277 4.963276 TGAGCCATCTATTTTGAAACGG 57.037 40.909 0.00 0.00 0.00 4.44
3166 3278 4.584874 TGAGCCATCTATTTTGAAACGGA 58.415 39.130 0.00 0.00 0.00 4.69
3167 3279 4.635765 TGAGCCATCTATTTTGAAACGGAG 59.364 41.667 0.00 0.00 0.00 4.63
3168 3280 4.843728 AGCCATCTATTTTGAAACGGAGA 58.156 39.130 0.00 0.00 0.00 3.71
3169 3281 4.878397 AGCCATCTATTTTGAAACGGAGAG 59.122 41.667 0.00 0.00 0.00 3.20
3170 3282 4.876107 GCCATCTATTTTGAAACGGAGAGA 59.124 41.667 0.00 0.00 0.00 3.10
3171 3283 5.007136 GCCATCTATTTTGAAACGGAGAGAG 59.993 44.000 0.00 0.00 0.00 3.20
3172 3284 6.109359 CCATCTATTTTGAAACGGAGAGAGT 58.891 40.000 0.00 0.00 0.00 3.24
3173 3285 7.265673 CCATCTATTTTGAAACGGAGAGAGTA 58.734 38.462 0.00 0.00 0.00 2.59
3174 3286 7.222999 CCATCTATTTTGAAACGGAGAGAGTAC 59.777 40.741 0.00 0.00 0.00 2.73
3175 3287 7.223260 TCTATTTTGAAACGGAGAGAGTACA 57.777 36.000 0.00 0.00 0.00 2.90
3176 3288 7.663827 TCTATTTTGAAACGGAGAGAGTACAA 58.336 34.615 0.00 0.00 0.00 2.41
3177 3289 6.787085 ATTTTGAAACGGAGAGAGTACAAG 57.213 37.500 0.00 0.00 0.00 3.16
3178 3290 4.931661 TTGAAACGGAGAGAGTACAAGT 57.068 40.909 0.00 0.00 0.00 3.16
3179 3291 4.500603 TGAAACGGAGAGAGTACAAGTC 57.499 45.455 0.00 0.00 0.00 3.01
3180 3292 4.142790 TGAAACGGAGAGAGTACAAGTCT 58.857 43.478 0.00 0.00 0.00 3.24
3181 3293 4.583489 TGAAACGGAGAGAGTACAAGTCTT 59.417 41.667 0.00 0.00 0.00 3.01
3182 3294 5.068723 TGAAACGGAGAGAGTACAAGTCTTT 59.931 40.000 0.00 0.00 0.00 2.52
3183 3295 4.506886 ACGGAGAGAGTACAAGTCTTTG 57.493 45.455 0.00 0.00 40.24 2.77
3184 3296 3.246619 CGGAGAGAGTACAAGTCTTTGC 58.753 50.000 0.00 0.00 37.85 3.68
3185 3297 3.305403 CGGAGAGAGTACAAGTCTTTGCA 60.305 47.826 0.00 0.00 37.85 4.08
3186 3298 3.991121 GGAGAGAGTACAAGTCTTTGCAC 59.009 47.826 0.00 0.00 37.85 4.57
3187 3299 4.501571 GGAGAGAGTACAAGTCTTTGCACA 60.502 45.833 0.00 0.00 37.85 4.57
3188 3300 4.372656 AGAGAGTACAAGTCTTTGCACAC 58.627 43.478 0.00 0.00 37.85 3.82
3189 3301 3.123804 AGAGTACAAGTCTTTGCACACG 58.876 45.455 0.00 0.00 37.85 4.49
3190 3302 2.864343 GAGTACAAGTCTTTGCACACGT 59.136 45.455 0.00 0.00 37.85 4.49
3191 3303 3.267483 AGTACAAGTCTTTGCACACGTT 58.733 40.909 0.00 0.00 37.85 3.99
3192 3304 2.825086 ACAAGTCTTTGCACACGTTC 57.175 45.000 0.00 0.00 37.85 3.95
3193 3305 1.400494 ACAAGTCTTTGCACACGTTCC 59.600 47.619 0.00 0.00 37.85 3.62
3194 3306 1.400142 CAAGTCTTTGCACACGTTCCA 59.600 47.619 0.00 0.00 0.00 3.53
3195 3307 1.014352 AGTCTTTGCACACGTTCCAC 58.986 50.000 0.00 0.00 0.00 4.02
3196 3308 1.014352 GTCTTTGCACACGTTCCACT 58.986 50.000 0.00 0.00 0.00 4.00
3197 3309 2.159014 AGTCTTTGCACACGTTCCACTA 60.159 45.455 0.00 0.00 0.00 2.74
3198 3310 2.806244 GTCTTTGCACACGTTCCACTAT 59.194 45.455 0.00 0.00 0.00 2.12
3199 3311 2.805671 TCTTTGCACACGTTCCACTATG 59.194 45.455 0.00 0.00 0.00 2.23
3200 3312 2.535012 TTGCACACGTTCCACTATGA 57.465 45.000 0.00 0.00 0.00 2.15
3201 3313 2.535012 TGCACACGTTCCACTATGAA 57.465 45.000 0.00 0.00 0.00 2.57
3202 3314 2.139917 TGCACACGTTCCACTATGAAC 58.860 47.619 0.00 0.00 40.96 3.18
3203 3315 1.463444 GCACACGTTCCACTATGAACC 59.537 52.381 0.00 0.00 41.24 3.62
3204 3316 2.761559 CACACGTTCCACTATGAACCA 58.238 47.619 0.00 0.00 41.24 3.67
3205 3317 3.334691 CACACGTTCCACTATGAACCAT 58.665 45.455 0.00 0.00 41.24 3.55
3206 3318 4.500127 CACACGTTCCACTATGAACCATA 58.500 43.478 0.00 0.00 41.24 2.74
3207 3319 5.116180 CACACGTTCCACTATGAACCATAT 58.884 41.667 0.00 0.00 41.24 1.78
3208 3320 6.277605 CACACGTTCCACTATGAACCATATA 58.722 40.000 0.00 0.00 41.24 0.86
3209 3321 6.929049 CACACGTTCCACTATGAACCATATAT 59.071 38.462 0.00 0.00 41.24 0.86
3210 3322 6.929049 ACACGTTCCACTATGAACCATATATG 59.071 38.462 5.68 5.68 41.24 1.78
3235 3347 9.666191 TGGATATATATAGATGCATTCCAGAGT 57.334 33.333 7.40 0.00 0.00 3.24
3236 3348 9.926158 GGATATATATAGATGCATTCCAGAGTG 57.074 37.037 0.00 0.00 0.00 3.51
3244 3356 7.071069 AGATGCATTCCAGAGTGTATATTCA 57.929 36.000 0.00 0.00 0.00 2.57
3245 3357 6.933521 AGATGCATTCCAGAGTGTATATTCAC 59.066 38.462 0.00 4.40 38.46 3.18
3259 3371 9.618890 AGTGTATATTCACTCATTTTGCTACAT 57.381 29.630 9.03 0.00 44.07 2.29
3312 3424 9.739276 ATGACTTATATCTAGGAACAGAGAGAG 57.261 37.037 0.00 0.00 0.00 3.20
3313 3425 8.719596 TGACTTATATCTAGGAACAGAGAGAGT 58.280 37.037 0.00 0.00 0.00 3.24
3318 3430 8.685838 ATATCTAGGAACAGAGAGAGTACAAC 57.314 38.462 0.00 0.00 0.00 3.32
3319 3431 5.254901 TCTAGGAACAGAGAGAGTACAACC 58.745 45.833 0.00 0.00 0.00 3.77
3320 3432 4.120946 AGGAACAGAGAGAGTACAACCT 57.879 45.455 0.00 0.00 0.00 3.50
3321 3433 5.258216 AGGAACAGAGAGAGTACAACCTA 57.742 43.478 0.00 0.00 0.00 3.08
3322 3434 5.642165 AGGAACAGAGAGAGTACAACCTAA 58.358 41.667 0.00 0.00 0.00 2.69
3323 3435 6.257586 AGGAACAGAGAGAGTACAACCTAAT 58.742 40.000 0.00 0.00 0.00 1.73
3324 3436 7.411808 AGGAACAGAGAGAGTACAACCTAATA 58.588 38.462 0.00 0.00 0.00 0.98
3325 3437 7.339976 AGGAACAGAGAGAGTACAACCTAATAC 59.660 40.741 0.00 0.00 0.00 1.89
3326 3438 7.339976 GGAACAGAGAGAGTACAACCTAATACT 59.660 40.741 0.00 0.00 34.28 2.12
3327 3439 8.653036 AACAGAGAGAGTACAACCTAATACTT 57.347 34.615 0.00 0.00 31.69 2.24
3328 3440 9.750783 AACAGAGAGAGTACAACCTAATACTTA 57.249 33.333 0.00 0.00 31.69 2.24
3329 3441 9.750783 ACAGAGAGAGTACAACCTAATACTTAA 57.249 33.333 0.00 0.00 31.69 1.85
3332 3444 9.881529 GAGAGAGTACAACCTAATACTTAATCG 57.118 37.037 0.00 0.00 31.69 3.34
3333 3445 9.406113 AGAGAGTACAACCTAATACTTAATCGT 57.594 33.333 0.00 0.00 31.69 3.73
3334 3446 9.662545 GAGAGTACAACCTAATACTTAATCGTC 57.337 37.037 0.00 0.00 31.69 4.20
3335 3447 8.341173 AGAGTACAACCTAATACTTAATCGTCG 58.659 37.037 0.00 0.00 31.69 5.12
3336 3448 7.989826 AGTACAACCTAATACTTAATCGTCGT 58.010 34.615 0.00 0.00 0.00 4.34
3337 3449 8.462016 AGTACAACCTAATACTTAATCGTCGTT 58.538 33.333 0.00 0.00 0.00 3.85
3338 3450 7.515957 ACAACCTAATACTTAATCGTCGTTG 57.484 36.000 0.00 0.00 34.51 4.10
3339 3451 6.035327 ACAACCTAATACTTAATCGTCGTTGC 59.965 38.462 0.00 0.00 32.20 4.17
3340 3452 5.899299 ACCTAATACTTAATCGTCGTTGCT 58.101 37.500 0.00 0.00 0.00 3.91
3341 3453 7.031226 ACCTAATACTTAATCGTCGTTGCTA 57.969 36.000 0.00 0.00 0.00 3.49
3342 3454 7.655490 ACCTAATACTTAATCGTCGTTGCTAT 58.345 34.615 0.00 0.00 0.00 2.97
3343 3455 8.786898 ACCTAATACTTAATCGTCGTTGCTATA 58.213 33.333 0.00 0.00 0.00 1.31
3344 3456 9.059485 CCTAATACTTAATCGTCGTTGCTATAC 57.941 37.037 0.00 0.00 0.00 1.47
3345 3457 9.603298 CTAATACTTAATCGTCGTTGCTATACA 57.397 33.333 0.00 0.00 0.00 2.29
3346 3458 7.848716 ATACTTAATCGTCGTTGCTATACAC 57.151 36.000 0.00 0.00 0.00 2.90
3347 3459 5.643664 ACTTAATCGTCGTTGCTATACACA 58.356 37.500 0.00 0.00 0.00 3.72
3348 3460 6.094719 ACTTAATCGTCGTTGCTATACACAA 58.905 36.000 0.00 0.00 0.00 3.33
3349 3461 6.755141 ACTTAATCGTCGTTGCTATACACAAT 59.245 34.615 0.00 0.00 0.00 2.71
3350 3462 5.637104 AATCGTCGTTGCTATACACAATC 57.363 39.130 0.00 0.00 0.00 2.67
3351 3463 4.365899 TCGTCGTTGCTATACACAATCT 57.634 40.909 0.00 0.00 0.00 2.40
3352 3464 4.102649 TCGTCGTTGCTATACACAATCTG 58.897 43.478 0.00 0.00 0.00 2.90
3353 3465 4.102649 CGTCGTTGCTATACACAATCTGA 58.897 43.478 0.00 0.00 0.00 3.27
3354 3466 4.561213 CGTCGTTGCTATACACAATCTGAA 59.439 41.667 0.00 0.00 0.00 3.02
3355 3467 5.275927 CGTCGTTGCTATACACAATCTGAAG 60.276 44.000 0.00 0.00 0.00 3.02
3356 3468 5.577164 GTCGTTGCTATACACAATCTGAAGT 59.423 40.000 0.00 0.00 0.00 3.01
3357 3469 6.090898 GTCGTTGCTATACACAATCTGAAGTT 59.909 38.462 0.00 0.00 0.00 2.66
3358 3470 6.310467 TCGTTGCTATACACAATCTGAAGTTC 59.690 38.462 0.00 0.00 0.00 3.01
3359 3471 6.311445 CGTTGCTATACACAATCTGAAGTTCT 59.689 38.462 4.17 0.00 0.00 3.01
3360 3472 7.459486 GTTGCTATACACAATCTGAAGTTCTG 58.541 38.462 4.17 3.79 0.00 3.02
3361 3473 6.935167 TGCTATACACAATCTGAAGTTCTGA 58.065 36.000 14.02 14.02 0.00 3.27
3362 3474 7.386059 TGCTATACACAATCTGAAGTTCTGAA 58.614 34.615 15.40 0.06 0.00 3.02
3363 3475 7.547019 TGCTATACACAATCTGAAGTTCTGAAG 59.453 37.037 15.40 13.16 0.00 3.02
3364 3476 7.010923 GCTATACACAATCTGAAGTTCTGAAGG 59.989 40.741 15.40 12.59 0.00 3.46
3365 3477 4.392940 ACACAATCTGAAGTTCTGAAGGG 58.607 43.478 15.40 14.02 0.00 3.95
3366 3478 3.755378 CACAATCTGAAGTTCTGAAGGGG 59.245 47.826 15.40 8.70 0.00 4.79
3367 3479 3.395941 ACAATCTGAAGTTCTGAAGGGGT 59.604 43.478 15.40 9.03 0.00 4.95
3368 3480 3.990959 ATCTGAAGTTCTGAAGGGGTC 57.009 47.619 15.40 0.00 0.00 4.46
3369 3481 1.978580 TCTGAAGTTCTGAAGGGGTCC 59.021 52.381 9.78 0.00 0.00 4.46
3370 3482 1.699634 CTGAAGTTCTGAAGGGGTCCA 59.300 52.381 4.17 0.00 0.00 4.02
3371 3483 2.106511 CTGAAGTTCTGAAGGGGTCCAA 59.893 50.000 4.17 0.00 0.00 3.53
3372 3484 2.158667 TGAAGTTCTGAAGGGGTCCAAC 60.159 50.000 4.17 0.00 0.00 3.77
3373 3485 1.518367 AGTTCTGAAGGGGTCCAACA 58.482 50.000 0.00 0.00 0.00 3.33
3374 3486 1.850345 AGTTCTGAAGGGGTCCAACAA 59.150 47.619 0.00 0.00 0.00 2.83
3375 3487 2.158608 AGTTCTGAAGGGGTCCAACAAG 60.159 50.000 0.00 0.00 0.00 3.16
3376 3488 0.771127 TCTGAAGGGGTCCAACAAGG 59.229 55.000 0.00 0.00 39.47 3.61
3377 3489 0.478507 CTGAAGGGGTCCAACAAGGT 59.521 55.000 0.00 0.00 39.02 3.50
3378 3490 0.930726 TGAAGGGGTCCAACAAGGTT 59.069 50.000 0.00 0.00 39.02 3.50
3379 3491 1.328279 GAAGGGGTCCAACAAGGTTG 58.672 55.000 2.19 2.19 39.02 3.77
3380 3492 0.105709 AAGGGGTCCAACAAGGTTGG 60.106 55.000 19.53 19.53 40.87 3.77
3381 3493 0.996762 AGGGGTCCAACAAGGTTGGA 60.997 55.000 23.13 23.13 45.61 3.53
3387 3499 3.535280 TCCAACAAGGTTGGAAAAAGC 57.465 42.857 24.33 0.00 44.90 3.51
3388 3500 2.159170 TCCAACAAGGTTGGAAAAAGCG 60.159 45.455 24.33 0.86 44.90 4.68
3389 3501 2.200899 CAACAAGGTTGGAAAAAGCGG 58.799 47.619 1.23 0.00 0.00 5.52
3390 3502 1.480789 ACAAGGTTGGAAAAAGCGGT 58.519 45.000 0.00 0.00 0.00 5.68
3391 3503 2.657143 ACAAGGTTGGAAAAAGCGGTA 58.343 42.857 0.00 0.00 0.00 4.02
3392 3504 2.621526 ACAAGGTTGGAAAAAGCGGTAG 59.378 45.455 0.00 0.00 0.00 3.18
3393 3505 1.905637 AGGTTGGAAAAAGCGGTAGG 58.094 50.000 0.00 0.00 0.00 3.18
3394 3506 0.242825 GGTTGGAAAAAGCGGTAGGC 59.757 55.000 0.00 0.00 44.05 3.93
3411 3523 4.496670 CGTAAGCGAGGAGGTTGG 57.503 61.111 0.00 0.00 41.21 3.77
3412 3524 1.810030 CGTAAGCGAGGAGGTTGGC 60.810 63.158 0.00 0.00 41.21 4.52
3413 3525 1.449778 GTAAGCGAGGAGGTTGGCC 60.450 63.158 0.00 0.00 41.21 5.36
3428 3540 3.217231 GCCTTCGCCTAGTGCCTA 58.783 61.111 0.00 0.00 36.24 3.93
3429 3541 1.068250 GCCTTCGCCTAGTGCCTAG 59.932 63.158 3.06 3.06 36.24 3.02
3450 3562 2.109181 GTGCCTAAGCGCCCTAGG 59.891 66.667 22.97 22.97 44.01 3.02
3467 3579 4.151582 GCGTGGCCTAGGCGGTAA 62.152 66.667 27.24 10.19 43.06 2.85
3468 3580 2.819550 CGTGGCCTAGGCGGTAAT 59.180 61.111 27.24 0.00 43.06 1.89
3469 3581 2.043625 CGTGGCCTAGGCGGTAATA 58.956 57.895 27.24 6.52 43.06 0.98
3470 3582 0.606604 CGTGGCCTAGGCGGTAATAT 59.393 55.000 27.24 0.00 43.06 1.28
3471 3583 1.820519 CGTGGCCTAGGCGGTAATATA 59.179 52.381 27.24 3.36 43.06 0.86
3472 3584 2.231964 CGTGGCCTAGGCGGTAATATAA 59.768 50.000 27.24 1.51 43.06 0.98
3473 3585 3.118884 CGTGGCCTAGGCGGTAATATAAT 60.119 47.826 27.24 0.00 43.06 1.28
3474 3586 4.622220 CGTGGCCTAGGCGGTAATATAATT 60.622 45.833 27.24 0.00 43.06 1.40
3475 3587 4.634443 GTGGCCTAGGCGGTAATATAATTG 59.366 45.833 27.24 0.00 43.06 2.32
3476 3588 4.287585 TGGCCTAGGCGGTAATATAATTGT 59.712 41.667 27.24 0.00 43.06 2.71
3477 3589 5.221966 TGGCCTAGGCGGTAATATAATTGTT 60.222 40.000 27.24 0.00 43.06 2.83
3478 3590 6.013553 TGGCCTAGGCGGTAATATAATTGTTA 60.014 38.462 27.24 0.00 43.06 2.41
3479 3591 6.314648 GGCCTAGGCGGTAATATAATTGTTAC 59.685 42.308 27.24 2.95 43.06 2.50
3480 3592 7.101700 GCCTAGGCGGTAATATAATTGTTACT 58.898 38.462 20.16 0.00 31.95 2.24
3481 3593 7.277319 GCCTAGGCGGTAATATAATTGTTACTC 59.723 40.741 20.16 0.00 31.95 2.59
3482 3594 7.487189 CCTAGGCGGTAATATAATTGTTACTCG 59.513 40.741 0.00 10.51 31.95 4.18
3483 3595 6.752168 AGGCGGTAATATAATTGTTACTCGT 58.248 36.000 14.49 0.00 31.95 4.18
3484 3596 7.885297 AGGCGGTAATATAATTGTTACTCGTA 58.115 34.615 14.49 0.00 31.95 3.43
3485 3597 8.025445 AGGCGGTAATATAATTGTTACTCGTAG 58.975 37.037 14.49 0.00 31.95 3.51
3486 3598 7.809806 GGCGGTAATATAATTGTTACTCGTAGT 59.190 37.037 14.49 0.00 31.95 2.73
3487 3599 8.633408 GCGGTAATATAATTGTTACTCGTAGTG 58.367 37.037 14.49 0.00 31.95 2.74
3488 3600 9.669353 CGGTAATATAATTGTTACTCGTAGTGT 57.331 33.333 8.92 0.00 38.10 3.55
3495 3607 6.764877 ATTGTTACTCGTAGTGTCTTTGTG 57.235 37.500 0.00 0.00 35.24 3.33
3496 3608 5.503662 TGTTACTCGTAGTGTCTTTGTGA 57.496 39.130 0.00 0.00 35.24 3.58
3497 3609 6.080648 TGTTACTCGTAGTGTCTTTGTGAT 57.919 37.500 0.00 0.00 35.24 3.06
3498 3610 6.509656 TGTTACTCGTAGTGTCTTTGTGATT 58.490 36.000 0.00 0.00 35.24 2.57
3499 3611 7.650890 TGTTACTCGTAGTGTCTTTGTGATTA 58.349 34.615 0.00 0.00 35.24 1.75
3500 3612 8.301720 TGTTACTCGTAGTGTCTTTGTGATTAT 58.698 33.333 0.00 0.00 35.24 1.28
3501 3613 9.136952 GTTACTCGTAGTGTCTTTGTGATTATT 57.863 33.333 0.00 0.00 35.24 1.40
3510 3622 9.342308 AGTGTCTTTGTGATTATTATATGGGTG 57.658 33.333 0.00 0.00 0.00 4.61
3511 3623 9.120538 GTGTCTTTGTGATTATTATATGGGTGT 57.879 33.333 0.00 0.00 0.00 4.16
3512 3624 9.693739 TGTCTTTGTGATTATTATATGGGTGTT 57.306 29.630 0.00 0.00 0.00 3.32
3513 3625 9.950680 GTCTTTGTGATTATTATATGGGTGTTG 57.049 33.333 0.00 0.00 0.00 3.33
3514 3626 9.913310 TCTTTGTGATTATTATATGGGTGTTGA 57.087 29.630 0.00 0.00 0.00 3.18
3528 3640 5.442391 TGGGTGTTGATATTAGTTTAGGGC 58.558 41.667 0.00 0.00 0.00 5.19
3529 3641 5.044772 TGGGTGTTGATATTAGTTTAGGGCA 60.045 40.000 0.00 0.00 0.00 5.36
3530 3642 6.068670 GGGTGTTGATATTAGTTTAGGGCAT 58.931 40.000 0.00 0.00 0.00 4.40
3531 3643 7.147284 TGGGTGTTGATATTAGTTTAGGGCATA 60.147 37.037 0.00 0.00 0.00 3.14
3532 3644 7.888546 GGGTGTTGATATTAGTTTAGGGCATAT 59.111 37.037 0.00 0.00 0.00 1.78
3533 3645 9.953565 GGTGTTGATATTAGTTTAGGGCATATA 57.046 33.333 0.00 0.00 0.00 0.86
3550 3662 9.759473 AGGGCATATAAATAAGTTGATTAGCAT 57.241 29.630 0.00 0.00 0.00 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.021981 GGAAAAGGGGCAATGTATATGAGC 60.022 45.833 0.00 0.00 0.00 4.26
21 22 5.385198 GAGGAAAAGGGGCAATGTATATGA 58.615 41.667 0.00 0.00 0.00 2.15
25 26 2.314549 TGGAGGAAAAGGGGCAATGTAT 59.685 45.455 0.00 0.00 0.00 2.29
301 312 0.963856 AGATGGTCGGTGCAGTACGA 60.964 55.000 4.19 4.19 36.68 3.43
302 313 0.802222 CAGATGGTCGGTGCAGTACG 60.802 60.000 0.00 0.00 0.00 3.67
303 314 0.460284 CCAGATGGTCGGTGCAGTAC 60.460 60.000 0.00 0.00 0.00 2.73
333 345 6.278363 TGGAAAATAATAGTACGAGTCCAGC 58.722 40.000 0.00 0.00 0.00 4.85
334 346 7.599245 GGATGGAAAATAATAGTACGAGTCCAG 59.401 40.741 0.00 0.00 36.16 3.86
351 363 6.269538 TCCTCATTTGACAATTGGATGGAAAA 59.730 34.615 10.83 1.79 0.00 2.29
377 389 5.334105 CGTCGGGAAATAATTAGATGGCAAG 60.334 44.000 0.00 0.00 0.00 4.01
381 393 6.854496 TTTCGTCGGGAAATAATTAGATGG 57.146 37.500 0.00 0.00 39.67 3.51
395 407 1.067425 TGGTACTGTCATTTCGTCGGG 60.067 52.381 0.00 0.00 0.00 5.14
401 413 4.002982 TGCTGTGATGGTACTGTCATTTC 58.997 43.478 4.48 0.00 0.00 2.17
435 448 5.063880 TGATCTGCAGATGATCATTTCAGG 58.936 41.667 33.33 10.67 43.47 3.86
441 454 6.307776 AGGATTTTGATCTGCAGATGATCAT 58.692 36.000 33.33 22.01 46.31 2.45
460 473 4.437930 CGTCGGTTTCGAGTAGTAAGGATT 60.438 45.833 0.00 0.00 46.91 3.01
470 483 3.154584 TTGGCCGTCGGTTTCGAGT 62.155 57.895 13.94 0.00 46.91 4.18
471 484 2.356553 TTGGCCGTCGGTTTCGAG 60.357 61.111 13.94 0.00 46.91 4.04
472 485 2.162338 ATCTTGGCCGTCGGTTTCGA 62.162 55.000 13.94 5.59 43.86 3.71
475 488 0.743345 GCTATCTTGGCCGTCGGTTT 60.743 55.000 13.94 0.00 0.00 3.27
495 508 3.869246 ACCGTTCATTCGTGGATTATGAC 59.131 43.478 0.00 0.00 0.00 3.06
507 528 0.931005 GCTGATCCGACCGTTCATTC 59.069 55.000 0.00 0.00 0.00 2.67
524 545 0.179089 GCACTGATGATGAGACGGCT 60.179 55.000 0.00 0.00 0.00 5.52
540 561 2.092375 AGCCTAGAGGTAATTTGGGCAC 60.092 50.000 4.52 0.00 40.40 5.01
552 573 6.435591 TGTCTGAATATGTGATAGCCTAGAGG 59.564 42.308 0.00 0.00 38.53 3.69
562 583 9.512588 AAAAGAAAGAGTGTCTGAATATGTGAT 57.487 29.630 0.00 0.00 0.00 3.06
587 609 6.372659 TGTGCAAAAAGGCAAATTCTACAAAA 59.627 30.769 0.00 0.00 46.93 2.44
589 611 5.293079 GTGTGCAAAAAGGCAAATTCTACAA 59.707 36.000 0.00 0.00 46.93 2.41
590 612 4.808364 GTGTGCAAAAAGGCAAATTCTACA 59.192 37.500 0.00 0.00 46.93 2.74
591 613 5.049828 AGTGTGCAAAAAGGCAAATTCTAC 58.950 37.500 0.00 0.00 46.93 2.59
592 614 5.049167 CAGTGTGCAAAAAGGCAAATTCTA 58.951 37.500 0.00 0.00 46.93 2.10
594 616 3.546616 GCAGTGTGCAAAAAGGCAAATTC 60.547 43.478 0.00 0.00 46.93 2.17
596 618 1.941975 GCAGTGTGCAAAAAGGCAAAT 59.058 42.857 0.00 0.00 46.93 2.32
597 619 1.367659 GCAGTGTGCAAAAAGGCAAA 58.632 45.000 0.00 0.00 46.93 3.68
598 620 3.062585 GCAGTGTGCAAAAAGGCAA 57.937 47.368 0.00 0.00 46.93 4.52
599 621 4.831698 GCAGTGTGCAAAAAGGCA 57.168 50.000 0.00 0.00 44.26 4.75
608 630 3.870419 TGATTTTCCTTTTTGCAGTGTGC 59.130 39.130 0.00 0.00 45.29 4.57
609 631 6.607735 ATTGATTTTCCTTTTTGCAGTGTG 57.392 33.333 0.00 0.00 0.00 3.82
613 635 7.486802 AGTCAATTGATTTTCCTTTTTGCAG 57.513 32.000 12.12 0.00 0.00 4.41
657 706 1.295357 TGTGGTGGATTAACGCGCAG 61.295 55.000 5.73 2.42 0.00 5.18
669 718 5.713025 CATTTCTTTACTCCATTGTGGTGG 58.287 41.667 3.45 0.00 39.03 4.61
701 752 4.563993 CCCCGTGAACAGTTCTTATTGGTA 60.564 45.833 14.51 0.00 0.00 3.25
713 764 3.328382 TTCATTAGTCCCCGTGAACAG 57.672 47.619 0.00 0.00 0.00 3.16
792 852 0.884704 GCTTGGCGTTGGACTCTGAA 60.885 55.000 0.00 0.00 0.00 3.02
794 854 1.597854 TGCTTGGCGTTGGACTCTG 60.598 57.895 0.00 0.00 0.00 3.35
803 864 2.591715 GACTGTGGTGCTTGGCGT 60.592 61.111 0.00 0.00 0.00 5.68
807 868 1.669115 CCGAGGACTGTGGTGCTTG 60.669 63.158 0.00 0.00 44.07 4.01
839 907 1.225426 TGGAGACATGGGATGCTGC 59.775 57.895 0.00 0.00 33.40 5.25
936 1019 3.065925 GCTAGCTAACTGCAAAGAATGGG 59.934 47.826 7.70 0.00 45.94 4.00
962 1045 4.966366 GCAAGAATCCGATGAAAGAATTCG 59.034 41.667 0.00 0.00 38.46 3.34
975 1059 1.140407 GACCGACGAGCAAGAATCCG 61.140 60.000 0.00 0.00 0.00 4.18
976 1060 1.140407 CGACCGACGAGCAAGAATCC 61.140 60.000 0.00 0.00 45.77 3.01
992 1076 1.956170 ATCCGCGCCATTGATCGAC 60.956 57.895 0.00 0.00 0.00 4.20
1077 1161 2.607750 AGCGCCTTCTTCCCCTCA 60.608 61.111 2.29 0.00 0.00 3.86
1840 1924 0.463116 TCCATGATCTCGTCGACGGA 60.463 55.000 35.05 29.10 40.29 4.69
1843 1927 2.722071 GTTCTCCATGATCTCGTCGAC 58.278 52.381 5.18 5.18 0.00 4.20
2028 2112 3.518068 CCGCCCGGGATTTTCTGC 61.518 66.667 29.31 4.51 38.47 4.26
2658 2758 6.685828 CCATATGCACAGATATACGTACGTAC 59.314 42.308 28.99 17.01 33.01 3.67
2659 2759 6.372381 ACCATATGCACAGATATACGTACGTA 59.628 38.462 28.62 28.62 34.87 3.57
2660 2760 5.182570 ACCATATGCACAGATATACGTACGT 59.817 40.000 25.98 25.98 0.00 3.57
2661 2761 5.637809 ACCATATGCACAGATATACGTACG 58.362 41.667 15.01 15.01 0.00 3.67
2662 2762 7.532571 TGTACCATATGCACAGATATACGTAC 58.467 38.462 0.00 0.99 31.43 3.67
2663 2763 7.690952 TGTACCATATGCACAGATATACGTA 57.309 36.000 0.00 0.00 0.00 3.57
2664 2764 6.584185 TGTACCATATGCACAGATATACGT 57.416 37.500 0.00 0.00 0.00 3.57
2666 2766 8.034804 TGACATGTACCATATGCACAGATATAC 58.965 37.037 0.00 0.00 0.00 1.47
2667 2767 8.034804 GTGACATGTACCATATGCACAGATATA 58.965 37.037 0.00 0.00 35.07 0.86
2668 2768 6.875726 GTGACATGTACCATATGCACAGATAT 59.124 38.462 0.00 0.00 35.07 1.63
2669 2769 6.223120 GTGACATGTACCATATGCACAGATA 58.777 40.000 0.00 0.00 35.07 1.98
2671 2771 4.441792 GTGACATGTACCATATGCACAGA 58.558 43.478 0.00 0.00 35.07 3.41
2672 2772 3.245990 CGTGACATGTACCATATGCACAG 59.754 47.826 0.00 8.18 34.87 3.66
2673 2773 3.194062 CGTGACATGTACCATATGCACA 58.806 45.455 0.00 9.89 34.87 4.57
2674 2774 2.032894 GCGTGACATGTACCATATGCAC 60.033 50.000 0.00 0.00 33.38 4.57
2675 2775 2.209273 GCGTGACATGTACCATATGCA 58.791 47.619 0.00 0.00 0.00 3.96
2676 2776 1.531149 GGCGTGACATGTACCATATGC 59.469 52.381 0.00 0.47 0.00 3.14
2677 2777 2.543848 GTGGCGTGACATGTACCATATG 59.456 50.000 0.00 0.00 31.99 1.78
2678 2778 2.169561 TGTGGCGTGACATGTACCATAT 59.830 45.455 0.00 0.00 31.99 1.78
2679 2779 1.550976 TGTGGCGTGACATGTACCATA 59.449 47.619 0.00 0.00 31.99 2.74
2680 2780 0.323302 TGTGGCGTGACATGTACCAT 59.677 50.000 0.00 0.00 31.99 3.55
2681 2781 0.106894 TTGTGGCGTGACATGTACCA 59.893 50.000 0.00 1.43 0.00 3.25
2682 2782 1.448985 ATTGTGGCGTGACATGTACC 58.551 50.000 0.00 0.00 0.00 3.34
2683 2783 2.997303 TGTATTGTGGCGTGACATGTAC 59.003 45.455 0.00 0.00 0.00 2.90
2684 2784 3.320673 TGTATTGTGGCGTGACATGTA 57.679 42.857 0.00 0.00 0.00 2.29
2685 2785 2.177394 TGTATTGTGGCGTGACATGT 57.823 45.000 0.00 0.00 0.00 3.21
2686 2786 3.302415 CGTATGTATTGTGGCGTGACATG 60.302 47.826 0.00 0.00 33.05 3.21
2687 2787 2.863740 CGTATGTATTGTGGCGTGACAT 59.136 45.455 0.00 0.00 35.09 3.06
2688 2788 2.263945 CGTATGTATTGTGGCGTGACA 58.736 47.619 0.00 0.00 0.00 3.58
2689 2789 1.005347 GCGTATGTATTGTGGCGTGAC 60.005 52.381 0.00 0.00 0.00 3.67
2690 2790 1.282817 GCGTATGTATTGTGGCGTGA 58.717 50.000 0.00 0.00 0.00 4.35
2691 2791 1.003108 TGCGTATGTATTGTGGCGTG 58.997 50.000 0.00 0.00 0.00 5.34
2692 2792 1.597195 CATGCGTATGTATTGTGGCGT 59.403 47.619 5.20 0.00 0.00 5.68
2693 2793 1.597195 ACATGCGTATGTATTGTGGCG 59.403 47.619 18.03 0.00 45.45 5.69
2713 2813 9.781633 ACATACTTGTTTTTGGTACATACTGTA 57.218 29.630 0.00 0.00 31.17 2.74
2714 2814 8.685838 ACATACTTGTTTTTGGTACATACTGT 57.314 30.769 0.00 0.00 31.17 3.55
2716 2816 9.781633 TGTACATACTTGTTTTTGGTACATACT 57.218 29.630 0.00 0.00 36.06 2.12
2771 2879 3.056821 GGACCTTTCAAAATAGGCACCAC 60.057 47.826 0.00 0.00 34.79 4.16
2860 2972 9.555727 ACACTTAACAGTTAACACACATAATCT 57.444 29.630 8.61 0.00 0.00 2.40
2862 2974 9.332502 TCACACTTAACAGTTAACACACATAAT 57.667 29.630 8.61 0.00 0.00 1.28
2864 2976 8.198778 TCTCACACTTAACAGTTAACACACATA 58.801 33.333 8.61 0.00 0.00 2.29
2916 3028 7.693969 ATTTCCTTCTCAAAACATACAGAGG 57.306 36.000 0.00 0.00 0.00 3.69
2925 3037 8.214472 GCGTTTCATTAATTTCCTTCTCAAAAC 58.786 33.333 0.00 0.00 0.00 2.43
2969 3081 6.017440 GTGGCTGTGAGAGTATGTAAACAAAA 60.017 38.462 0.00 0.00 0.00 2.44
2973 3085 4.389077 GTGTGGCTGTGAGAGTATGTAAAC 59.611 45.833 0.00 0.00 0.00 2.01
2975 3087 3.576550 TGTGTGGCTGTGAGAGTATGTAA 59.423 43.478 0.00 0.00 0.00 2.41
2980 3092 2.899900 AGATTGTGTGGCTGTGAGAGTA 59.100 45.455 0.00 0.00 0.00 2.59
2983 3095 2.104622 TGAAGATTGTGTGGCTGTGAGA 59.895 45.455 0.00 0.00 0.00 3.27
3019 3131 7.170965 ACAGTGATCAGTGTATGGAGATTTTT 58.829 34.615 30.43 5.16 42.72 1.94
3020 3132 6.715280 ACAGTGATCAGTGTATGGAGATTTT 58.285 36.000 30.43 5.35 42.72 1.82
3021 3133 6.070596 TGACAGTGATCAGTGTATGGAGATTT 60.071 38.462 31.25 9.12 44.39 2.17
3022 3134 5.423290 TGACAGTGATCAGTGTATGGAGATT 59.577 40.000 31.25 9.81 44.39 2.40
3023 3135 4.958581 TGACAGTGATCAGTGTATGGAGAT 59.041 41.667 31.25 10.50 44.39 2.75
3024 3136 4.344104 TGACAGTGATCAGTGTATGGAGA 58.656 43.478 31.25 11.94 44.39 3.71
3025 3137 4.725790 TGACAGTGATCAGTGTATGGAG 57.274 45.455 31.25 8.05 44.39 3.86
3026 3138 5.012046 AGTTTGACAGTGATCAGTGTATGGA 59.988 40.000 31.25 17.04 44.39 3.41
3027 3139 5.240891 AGTTTGACAGTGATCAGTGTATGG 58.759 41.667 31.25 9.43 44.39 2.74
3028 3140 6.791887 AAGTTTGACAGTGATCAGTGTATG 57.208 37.500 31.25 9.79 44.39 2.39
3029 3141 8.097038 ACATAAGTTTGACAGTGATCAGTGTAT 58.903 33.333 31.25 18.47 44.39 2.29
3030 3142 7.384932 CACATAAGTTTGACAGTGATCAGTGTA 59.615 37.037 31.25 17.35 44.39 2.90
3031 3143 6.203530 CACATAAGTTTGACAGTGATCAGTGT 59.796 38.462 31.56 31.56 46.81 3.55
3032 3144 6.203530 ACACATAAGTTTGACAGTGATCAGTG 59.796 38.462 25.78 25.78 37.75 3.66
3033 3145 6.291377 ACACATAAGTTTGACAGTGATCAGT 58.709 36.000 0.00 0.00 0.00 3.41
3034 3146 6.424812 TGACACATAAGTTTGACAGTGATCAG 59.575 38.462 0.00 0.00 0.00 2.90
3035 3147 6.287525 TGACACATAAGTTTGACAGTGATCA 58.712 36.000 0.00 0.00 0.00 2.92
3036 3148 6.785488 TGACACATAAGTTTGACAGTGATC 57.215 37.500 0.00 0.00 0.00 2.92
3037 3149 7.877612 TGTATGACACATAAGTTTGACAGTGAT 59.122 33.333 0.00 0.00 30.04 3.06
3038 3150 7.213678 TGTATGACACATAAGTTTGACAGTGA 58.786 34.615 0.00 0.00 30.04 3.41
3039 3151 7.420184 TGTATGACACATAAGTTTGACAGTG 57.580 36.000 0.00 0.00 30.04 3.66
3077 3189 8.897809 CGAGTGTATTCGCAAAAGAAATAAAAA 58.102 29.630 0.00 0.00 33.39 1.94
3078 3190 8.071368 ACGAGTGTATTCGCAAAAGAAATAAAA 58.929 29.630 0.00 0.00 44.15 1.52
3079 3191 7.577979 ACGAGTGTATTCGCAAAAGAAATAAA 58.422 30.769 0.00 0.00 44.15 1.40
3080 3192 7.124347 ACGAGTGTATTCGCAAAAGAAATAA 57.876 32.000 0.00 0.00 44.15 1.40
3081 3193 6.715344 ACGAGTGTATTCGCAAAAGAAATA 57.285 33.333 0.00 0.00 44.15 1.40
3082 3194 5.607119 ACGAGTGTATTCGCAAAAGAAAT 57.393 34.783 0.00 0.00 44.15 2.17
3083 3195 5.462729 TGTACGAGTGTATTCGCAAAAGAAA 59.537 36.000 0.00 0.00 44.15 2.52
3084 3196 4.983538 TGTACGAGTGTATTCGCAAAAGAA 59.016 37.500 0.00 0.00 44.15 2.52
3085 3197 4.548494 TGTACGAGTGTATTCGCAAAAGA 58.452 39.130 0.00 0.00 44.15 2.52
3086 3198 4.896562 TGTACGAGTGTATTCGCAAAAG 57.103 40.909 0.00 0.00 44.15 2.27
3087 3199 4.924462 TGATGTACGAGTGTATTCGCAAAA 59.076 37.500 0.00 0.00 44.15 2.44
3088 3200 4.487019 TGATGTACGAGTGTATTCGCAAA 58.513 39.130 0.00 0.00 44.15 3.68
3089 3201 4.099380 TGATGTACGAGTGTATTCGCAA 57.901 40.909 0.00 0.00 44.15 4.85
3090 3202 3.768468 TGATGTACGAGTGTATTCGCA 57.232 42.857 0.00 0.00 44.15 5.10
3091 3203 6.581166 TCATATTGATGTACGAGTGTATTCGC 59.419 38.462 0.00 0.00 37.92 4.70
3092 3204 8.675040 ATCATATTGATGTACGAGTGTATTCG 57.325 34.615 0.00 0.00 39.91 3.34
3119 3231 9.444600 CAACTTTATGCTAACCTTAAAGGAGTA 57.555 33.333 0.00 0.00 41.72 2.59
3120 3232 8.161425 TCAACTTTATGCTAACCTTAAAGGAGT 58.839 33.333 0.00 0.00 41.72 3.85
3121 3233 8.561738 TCAACTTTATGCTAACCTTAAAGGAG 57.438 34.615 0.00 0.00 41.72 3.69
3122 3234 7.120726 GCTCAACTTTATGCTAACCTTAAAGGA 59.879 37.037 0.00 0.00 41.72 3.36
3123 3235 7.251281 GCTCAACTTTATGCTAACCTTAAAGG 58.749 38.462 11.11 0.00 41.72 3.11
3124 3236 7.094377 TGGCTCAACTTTATGCTAACCTTAAAG 60.094 37.037 0.00 0.00 42.46 1.85
3125 3237 6.717540 TGGCTCAACTTTATGCTAACCTTAAA 59.282 34.615 0.00 0.00 0.00 1.52
3126 3238 6.242396 TGGCTCAACTTTATGCTAACCTTAA 58.758 36.000 0.00 0.00 0.00 1.85
3127 3239 5.811190 TGGCTCAACTTTATGCTAACCTTA 58.189 37.500 0.00 0.00 0.00 2.69
3128 3240 4.662278 TGGCTCAACTTTATGCTAACCTT 58.338 39.130 0.00 0.00 0.00 3.50
3129 3241 4.301072 TGGCTCAACTTTATGCTAACCT 57.699 40.909 0.00 0.00 0.00 3.50
3130 3242 4.884164 AGATGGCTCAACTTTATGCTAACC 59.116 41.667 0.00 0.00 0.00 2.85
3131 3243 7.736447 ATAGATGGCTCAACTTTATGCTAAC 57.264 36.000 0.00 0.00 0.00 2.34
3132 3244 8.752005 AAATAGATGGCTCAACTTTATGCTAA 57.248 30.769 0.00 0.00 0.00 3.09
3133 3245 8.623903 CAAAATAGATGGCTCAACTTTATGCTA 58.376 33.333 0.00 0.00 0.00 3.49
3134 3246 7.340232 TCAAAATAGATGGCTCAACTTTATGCT 59.660 33.333 0.00 0.00 0.00 3.79
3135 3247 7.483307 TCAAAATAGATGGCTCAACTTTATGC 58.517 34.615 0.00 0.00 0.00 3.14
3136 3248 9.859427 TTTCAAAATAGATGGCTCAACTTTATG 57.141 29.630 0.00 0.00 0.00 1.90
3137 3249 9.860898 GTTTCAAAATAGATGGCTCAACTTTAT 57.139 29.630 0.00 0.00 0.00 1.40
3138 3250 8.020819 CGTTTCAAAATAGATGGCTCAACTTTA 58.979 33.333 0.00 0.00 0.00 1.85
3139 3251 6.863126 CGTTTCAAAATAGATGGCTCAACTTT 59.137 34.615 0.00 0.00 0.00 2.66
3140 3252 6.381801 CGTTTCAAAATAGATGGCTCAACTT 58.618 36.000 0.00 0.00 0.00 2.66
3141 3253 5.106157 CCGTTTCAAAATAGATGGCTCAACT 60.106 40.000 0.00 0.00 0.00 3.16
3142 3254 5.095490 CCGTTTCAAAATAGATGGCTCAAC 58.905 41.667 0.00 0.00 0.00 3.18
3143 3255 5.007034 TCCGTTTCAAAATAGATGGCTCAA 58.993 37.500 0.00 0.00 0.00 3.02
3144 3256 4.584874 TCCGTTTCAAAATAGATGGCTCA 58.415 39.130 0.00 0.00 0.00 4.26
3145 3257 4.876107 TCTCCGTTTCAAAATAGATGGCTC 59.124 41.667 0.00 0.00 0.00 4.70
3146 3258 4.843728 TCTCCGTTTCAAAATAGATGGCT 58.156 39.130 0.00 0.00 0.00 4.75
3147 3259 4.876107 TCTCTCCGTTTCAAAATAGATGGC 59.124 41.667 0.00 0.00 0.00 4.40
3148 3260 6.109359 ACTCTCTCCGTTTCAAAATAGATGG 58.891 40.000 0.00 0.00 0.00 3.51
3149 3261 7.759886 TGTACTCTCTCCGTTTCAAAATAGATG 59.240 37.037 0.00 0.00 0.00 2.90
3150 3262 7.837863 TGTACTCTCTCCGTTTCAAAATAGAT 58.162 34.615 0.00 0.00 0.00 1.98
3151 3263 7.223260 TGTACTCTCTCCGTTTCAAAATAGA 57.777 36.000 0.00 0.00 0.00 1.98
3152 3264 7.599245 ACTTGTACTCTCTCCGTTTCAAAATAG 59.401 37.037 0.00 0.00 0.00 1.73
3153 3265 7.439381 ACTTGTACTCTCTCCGTTTCAAAATA 58.561 34.615 0.00 0.00 0.00 1.40
3154 3266 6.289064 ACTTGTACTCTCTCCGTTTCAAAAT 58.711 36.000 0.00 0.00 0.00 1.82
3155 3267 5.667466 ACTTGTACTCTCTCCGTTTCAAAA 58.333 37.500 0.00 0.00 0.00 2.44
3156 3268 5.068723 AGACTTGTACTCTCTCCGTTTCAAA 59.931 40.000 0.00 0.00 0.00 2.69
3157 3269 4.583489 AGACTTGTACTCTCTCCGTTTCAA 59.417 41.667 0.00 0.00 0.00 2.69
3158 3270 4.142790 AGACTTGTACTCTCTCCGTTTCA 58.857 43.478 0.00 0.00 0.00 2.69
3159 3271 4.769859 AGACTTGTACTCTCTCCGTTTC 57.230 45.455 0.00 0.00 0.00 2.78
3160 3272 5.290386 CAAAGACTTGTACTCTCTCCGTTT 58.710 41.667 0.00 0.00 0.00 3.60
3161 3273 4.796618 GCAAAGACTTGTACTCTCTCCGTT 60.797 45.833 0.00 0.00 34.79 4.44
3162 3274 3.305471 GCAAAGACTTGTACTCTCTCCGT 60.305 47.826 0.00 0.00 34.79 4.69
3163 3275 3.246619 GCAAAGACTTGTACTCTCTCCG 58.753 50.000 0.00 0.00 34.79 4.63
3164 3276 3.991121 GTGCAAAGACTTGTACTCTCTCC 59.009 47.826 0.00 0.00 42.84 3.71
3165 3277 4.446051 GTGTGCAAAGACTTGTACTCTCTC 59.554 45.833 7.45 0.00 45.42 3.20
3166 3278 4.372656 GTGTGCAAAGACTTGTACTCTCT 58.627 43.478 7.45 0.00 45.42 3.10
3167 3279 3.182572 CGTGTGCAAAGACTTGTACTCTC 59.817 47.826 7.45 0.00 45.42 3.20
3168 3280 3.123804 CGTGTGCAAAGACTTGTACTCT 58.876 45.455 7.45 0.00 45.42 3.24
3169 3281 2.864343 ACGTGTGCAAAGACTTGTACTC 59.136 45.455 7.45 3.66 45.42 2.59
3170 3282 2.901249 ACGTGTGCAAAGACTTGTACT 58.099 42.857 7.45 0.00 45.42 2.73
3171 3283 3.545426 GGAACGTGTGCAAAGACTTGTAC 60.545 47.826 0.00 0.00 45.42 2.90
3172 3284 2.610374 GGAACGTGTGCAAAGACTTGTA 59.390 45.455 0.00 0.00 34.79 2.41
3173 3285 1.400494 GGAACGTGTGCAAAGACTTGT 59.600 47.619 0.00 0.00 34.79 3.16
3174 3286 1.400142 TGGAACGTGTGCAAAGACTTG 59.600 47.619 0.00 0.00 35.49 3.16
3175 3287 1.400494 GTGGAACGTGTGCAAAGACTT 59.600 47.619 0.00 0.00 0.00 3.01
3176 3288 1.014352 GTGGAACGTGTGCAAAGACT 58.986 50.000 0.00 0.00 0.00 3.24
3177 3289 1.014352 AGTGGAACGTGTGCAAAGAC 58.986 50.000 0.00 0.00 45.86 3.01
3178 3290 2.605837 TAGTGGAACGTGTGCAAAGA 57.394 45.000 0.00 0.00 45.86 2.52
3179 3291 2.805671 TCATAGTGGAACGTGTGCAAAG 59.194 45.455 0.00 0.00 45.86 2.77
3180 3292 2.839975 TCATAGTGGAACGTGTGCAAA 58.160 42.857 0.00 0.00 45.86 3.68
3181 3293 2.535012 TCATAGTGGAACGTGTGCAA 57.465 45.000 0.00 0.00 45.86 4.08
3182 3294 2.139917 GTTCATAGTGGAACGTGTGCA 58.860 47.619 0.00 0.00 45.86 4.57
3183 3295 1.463444 GGTTCATAGTGGAACGTGTGC 59.537 52.381 0.00 0.00 46.34 4.57
3184 3296 2.761559 TGGTTCATAGTGGAACGTGTG 58.238 47.619 0.00 0.00 46.34 3.82
3185 3297 3.695830 ATGGTTCATAGTGGAACGTGT 57.304 42.857 0.00 0.00 46.34 4.49
3186 3298 6.368791 CCATATATGGTTCATAGTGGAACGTG 59.631 42.308 21.85 0.00 46.34 4.49
3187 3299 6.269077 TCCATATATGGTTCATAGTGGAACGT 59.731 38.462 27.36 0.00 46.34 3.99
3188 3300 6.697395 TCCATATATGGTTCATAGTGGAACG 58.303 40.000 27.36 0.68 46.34 3.95
3209 3321 9.666191 ACTCTGGAATGCATCTATATATATCCA 57.334 33.333 0.00 5.18 33.66 3.41
3210 3322 9.926158 CACTCTGGAATGCATCTATATATATCC 57.074 37.037 0.00 0.00 0.00 2.59
3218 3330 8.819845 TGAATATACACTCTGGAATGCATCTAT 58.180 33.333 0.00 0.00 0.00 1.98
3219 3331 8.090831 GTGAATATACACTCTGGAATGCATCTA 58.909 37.037 0.00 0.00 37.73 1.98
3220 3332 6.933521 GTGAATATACACTCTGGAATGCATCT 59.066 38.462 0.00 0.00 37.73 2.90
3221 3333 6.933521 AGTGAATATACACTCTGGAATGCATC 59.066 38.462 0.00 0.00 46.36 3.91
3222 3334 6.835174 AGTGAATATACACTCTGGAATGCAT 58.165 36.000 0.00 0.00 46.36 3.96
3223 3335 6.239217 AGTGAATATACACTCTGGAATGCA 57.761 37.500 0.00 0.00 46.36 3.96
3286 3398 9.739276 CTCTCTCTGTTCCTAGATATAAGTCAT 57.261 37.037 0.00 0.00 0.00 3.06
3287 3399 8.719596 ACTCTCTCTGTTCCTAGATATAAGTCA 58.280 37.037 0.00 0.00 0.00 3.41
3292 3404 9.781633 GTTGTACTCTCTCTGTTCCTAGATATA 57.218 37.037 0.00 0.00 0.00 0.86
3293 3405 7.722285 GGTTGTACTCTCTCTGTTCCTAGATAT 59.278 40.741 0.00 0.00 0.00 1.63
3294 3406 7.055378 GGTTGTACTCTCTCTGTTCCTAGATA 58.945 42.308 0.00 0.00 0.00 1.98
3295 3407 5.889289 GGTTGTACTCTCTCTGTTCCTAGAT 59.111 44.000 0.00 0.00 0.00 1.98
3296 3408 5.014333 AGGTTGTACTCTCTCTGTTCCTAGA 59.986 44.000 0.00 0.00 0.00 2.43
3297 3409 5.258051 AGGTTGTACTCTCTCTGTTCCTAG 58.742 45.833 0.00 0.00 0.00 3.02
3298 3410 5.258216 AGGTTGTACTCTCTCTGTTCCTA 57.742 43.478 0.00 0.00 0.00 2.94
3299 3411 4.120946 AGGTTGTACTCTCTCTGTTCCT 57.879 45.455 0.00 0.00 0.00 3.36
3300 3412 5.979288 TTAGGTTGTACTCTCTCTGTTCC 57.021 43.478 0.00 0.00 0.00 3.62
3301 3413 8.283699 AGTATTAGGTTGTACTCTCTCTGTTC 57.716 38.462 0.00 0.00 0.00 3.18
3302 3414 8.653036 AAGTATTAGGTTGTACTCTCTCTGTT 57.347 34.615 0.00 0.00 31.10 3.16
3303 3415 9.750783 TTAAGTATTAGGTTGTACTCTCTCTGT 57.249 33.333 0.00 0.00 31.10 3.41
3306 3418 9.881529 CGATTAAGTATTAGGTTGTACTCTCTC 57.118 37.037 0.00 0.00 31.10 3.20
3307 3419 9.406113 ACGATTAAGTATTAGGTTGTACTCTCT 57.594 33.333 0.00 0.00 31.10 3.10
3308 3420 9.662545 GACGATTAAGTATTAGGTTGTACTCTC 57.337 37.037 0.00 0.00 31.10 3.20
3309 3421 8.341173 CGACGATTAAGTATTAGGTTGTACTCT 58.659 37.037 0.00 0.00 31.10 3.24
3310 3422 8.125448 ACGACGATTAAGTATTAGGTTGTACTC 58.875 37.037 0.00 0.00 31.10 2.59
3311 3423 7.989826 ACGACGATTAAGTATTAGGTTGTACT 58.010 34.615 0.00 0.00 29.06 2.73
3312 3424 8.526681 CAACGACGATTAAGTATTAGGTTGTAC 58.473 37.037 0.00 0.00 30.01 2.90
3313 3425 7.220683 GCAACGACGATTAAGTATTAGGTTGTA 59.779 37.037 0.00 0.00 34.95 2.41
3314 3426 6.035327 GCAACGACGATTAAGTATTAGGTTGT 59.965 38.462 0.00 0.00 34.95 3.32
3315 3427 6.255020 AGCAACGACGATTAAGTATTAGGTTG 59.745 38.462 0.00 0.00 35.43 3.77
3316 3428 6.335777 AGCAACGACGATTAAGTATTAGGTT 58.664 36.000 0.00 0.00 0.00 3.50
3317 3429 5.899299 AGCAACGACGATTAAGTATTAGGT 58.101 37.500 0.00 0.00 0.00 3.08
3318 3430 9.059485 GTATAGCAACGACGATTAAGTATTAGG 57.941 37.037 0.00 0.00 0.00 2.69
3319 3431 9.603298 TGTATAGCAACGACGATTAAGTATTAG 57.397 33.333 0.00 0.00 0.00 1.73
3320 3432 9.385902 GTGTATAGCAACGACGATTAAGTATTA 57.614 33.333 0.00 0.00 0.00 0.98
3321 3433 7.916977 TGTGTATAGCAACGACGATTAAGTATT 59.083 33.333 0.00 0.00 0.00 1.89
3322 3434 7.420002 TGTGTATAGCAACGACGATTAAGTAT 58.580 34.615 0.00 0.00 0.00 2.12
3323 3435 6.784176 TGTGTATAGCAACGACGATTAAGTA 58.216 36.000 0.00 0.00 0.00 2.24
3324 3436 5.643664 TGTGTATAGCAACGACGATTAAGT 58.356 37.500 0.00 0.00 0.00 2.24
3325 3437 6.563398 TTGTGTATAGCAACGACGATTAAG 57.437 37.500 0.00 0.00 0.00 1.85
3326 3438 6.976349 AGATTGTGTATAGCAACGACGATTAA 59.024 34.615 0.00 0.00 0.00 1.40
3327 3439 6.416750 CAGATTGTGTATAGCAACGACGATTA 59.583 38.462 0.00 0.00 0.00 1.75
3328 3440 5.232202 CAGATTGTGTATAGCAACGACGATT 59.768 40.000 0.00 0.00 0.00 3.34
3329 3441 4.740205 CAGATTGTGTATAGCAACGACGAT 59.260 41.667 0.00 0.00 0.00 3.73
3330 3442 4.102649 CAGATTGTGTATAGCAACGACGA 58.897 43.478 0.00 0.00 0.00 4.20
3331 3443 4.102649 TCAGATTGTGTATAGCAACGACG 58.897 43.478 0.00 0.00 0.00 5.12
3332 3444 5.577164 ACTTCAGATTGTGTATAGCAACGAC 59.423 40.000 0.00 0.00 0.00 4.34
3333 3445 5.720202 ACTTCAGATTGTGTATAGCAACGA 58.280 37.500 0.00 0.00 0.00 3.85
3334 3446 6.311445 AGAACTTCAGATTGTGTATAGCAACG 59.689 38.462 0.00 0.00 0.00 4.10
3335 3447 7.331934 TCAGAACTTCAGATTGTGTATAGCAAC 59.668 37.037 0.00 0.00 0.00 4.17
3336 3448 7.386059 TCAGAACTTCAGATTGTGTATAGCAA 58.614 34.615 0.00 0.00 0.00 3.91
3337 3449 6.935167 TCAGAACTTCAGATTGTGTATAGCA 58.065 36.000 0.00 0.00 0.00 3.49
3338 3450 7.010923 CCTTCAGAACTTCAGATTGTGTATAGC 59.989 40.741 0.00 0.00 0.00 2.97
3339 3451 7.493971 CCCTTCAGAACTTCAGATTGTGTATAG 59.506 40.741 0.00 0.00 0.00 1.31
3340 3452 7.331026 CCCTTCAGAACTTCAGATTGTGTATA 58.669 38.462 0.00 0.00 0.00 1.47
3341 3453 6.176183 CCCTTCAGAACTTCAGATTGTGTAT 58.824 40.000 0.00 0.00 0.00 2.29
3342 3454 5.513094 CCCCTTCAGAACTTCAGATTGTGTA 60.513 44.000 0.00 0.00 0.00 2.90
3343 3455 4.392940 CCCTTCAGAACTTCAGATTGTGT 58.607 43.478 0.00 0.00 0.00 3.72
3344 3456 3.755378 CCCCTTCAGAACTTCAGATTGTG 59.245 47.826 0.00 0.00 0.00 3.33
3345 3457 3.395941 ACCCCTTCAGAACTTCAGATTGT 59.604 43.478 0.00 0.00 0.00 2.71
3346 3458 4.006319 GACCCCTTCAGAACTTCAGATTG 58.994 47.826 0.00 0.00 0.00 2.67
3347 3459 3.009584 GGACCCCTTCAGAACTTCAGATT 59.990 47.826 0.00 0.00 0.00 2.40
3348 3460 2.573915 GGACCCCTTCAGAACTTCAGAT 59.426 50.000 0.00 0.00 0.00 2.90
3349 3461 1.978580 GGACCCCTTCAGAACTTCAGA 59.021 52.381 0.00 0.00 0.00 3.27
3350 3462 1.699634 TGGACCCCTTCAGAACTTCAG 59.300 52.381 0.00 0.00 0.00 3.02
3351 3463 1.814429 TGGACCCCTTCAGAACTTCA 58.186 50.000 0.00 0.00 0.00 3.02
3352 3464 2.158667 TGTTGGACCCCTTCAGAACTTC 60.159 50.000 0.00 0.00 0.00 3.01
3353 3465 1.850345 TGTTGGACCCCTTCAGAACTT 59.150 47.619 0.00 0.00 0.00 2.66
3354 3466 1.518367 TGTTGGACCCCTTCAGAACT 58.482 50.000 0.00 0.00 0.00 3.01
3355 3467 2.230660 CTTGTTGGACCCCTTCAGAAC 58.769 52.381 0.00 0.00 0.00 3.01
3356 3468 1.144913 CCTTGTTGGACCCCTTCAGAA 59.855 52.381 0.00 0.00 38.35 3.02
3357 3469 0.771127 CCTTGTTGGACCCCTTCAGA 59.229 55.000 0.00 0.00 38.35 3.27
3358 3470 0.478507 ACCTTGTTGGACCCCTTCAG 59.521 55.000 0.00 0.00 39.71 3.02
3359 3471 0.930726 AACCTTGTTGGACCCCTTCA 59.069 50.000 0.00 0.00 39.71 3.02
3360 3472 1.328279 CAACCTTGTTGGACCCCTTC 58.672 55.000 0.00 0.00 39.71 3.46
3361 3473 0.105709 CCAACCTTGTTGGACCCCTT 60.106 55.000 18.90 0.00 42.06 3.95
3362 3474 0.996762 TCCAACCTTGTTGGACCCCT 60.997 55.000 21.54 0.00 43.17 4.79
3363 3475 1.539665 TCCAACCTTGTTGGACCCC 59.460 57.895 21.54 0.00 43.17 4.95
3367 3479 2.159170 CGCTTTTTCCAACCTTGTTGGA 60.159 45.455 21.54 21.54 46.08 3.53
3368 3480 2.200899 CGCTTTTTCCAACCTTGTTGG 58.799 47.619 17.84 17.84 40.87 3.77
3369 3481 2.200899 CCGCTTTTTCCAACCTTGTTG 58.799 47.619 0.00 0.00 0.00 3.33
3370 3482 1.828595 ACCGCTTTTTCCAACCTTGTT 59.171 42.857 0.00 0.00 0.00 2.83
3371 3483 1.480789 ACCGCTTTTTCCAACCTTGT 58.519 45.000 0.00 0.00 0.00 3.16
3372 3484 2.030274 CCTACCGCTTTTTCCAACCTTG 60.030 50.000 0.00 0.00 0.00 3.61
3373 3485 2.235891 CCTACCGCTTTTTCCAACCTT 58.764 47.619 0.00 0.00 0.00 3.50
3374 3486 1.905637 CCTACCGCTTTTTCCAACCT 58.094 50.000 0.00 0.00 0.00 3.50
3375 3487 0.242825 GCCTACCGCTTTTTCCAACC 59.757 55.000 0.00 0.00 0.00 3.77
3376 3488 0.109919 CGCCTACCGCTTTTTCCAAC 60.110 55.000 0.00 0.00 34.21 3.77
3377 3489 0.535553 ACGCCTACCGCTTTTTCCAA 60.536 50.000 0.00 0.00 41.76 3.53
3378 3490 0.321021 TACGCCTACCGCTTTTTCCA 59.679 50.000 0.00 0.00 41.76 3.53
3379 3491 1.395954 CTTACGCCTACCGCTTTTTCC 59.604 52.381 0.00 0.00 41.76 3.13
3380 3492 1.201998 GCTTACGCCTACCGCTTTTTC 60.202 52.381 0.00 0.00 41.76 2.29
3381 3493 0.800631 GCTTACGCCTACCGCTTTTT 59.199 50.000 0.00 0.00 41.76 1.94
3382 3494 1.356527 CGCTTACGCCTACCGCTTTT 61.357 55.000 0.00 0.00 41.76 2.27
3383 3495 1.808390 CGCTTACGCCTACCGCTTT 60.808 57.895 0.00 0.00 41.76 3.51
3384 3496 2.202703 CGCTTACGCCTACCGCTT 60.203 61.111 0.00 0.00 41.76 4.68
3385 3497 3.122250 CTCGCTTACGCCTACCGCT 62.122 63.158 0.00 0.00 41.76 5.52
3386 3498 2.654404 CTCGCTTACGCCTACCGC 60.654 66.667 0.00 0.00 41.76 5.68
3387 3499 2.025727 CCTCGCTTACGCCTACCG 59.974 66.667 0.00 0.00 44.21 4.02
3388 3500 1.359475 CTCCTCGCTTACGCCTACC 59.641 63.158 0.00 0.00 39.84 3.18
3389 3501 1.359475 CCTCCTCGCTTACGCCTAC 59.641 63.158 0.00 0.00 39.84 3.18
3390 3502 0.682209 AACCTCCTCGCTTACGCCTA 60.682 55.000 0.00 0.00 39.84 3.93
3391 3503 1.982938 AACCTCCTCGCTTACGCCT 60.983 57.895 0.00 0.00 39.84 5.52
3392 3504 1.810030 CAACCTCCTCGCTTACGCC 60.810 63.158 0.00 0.00 39.84 5.68
3393 3505 1.810030 CCAACCTCCTCGCTTACGC 60.810 63.158 0.00 0.00 39.84 4.42
3394 3506 1.810030 GCCAACCTCCTCGCTTACG 60.810 63.158 0.00 0.00 42.01 3.18
3395 3507 1.449778 GGCCAACCTCCTCGCTTAC 60.450 63.158 0.00 0.00 0.00 2.34
3396 3508 1.612442 AGGCCAACCTCCTCGCTTA 60.612 57.895 5.01 0.00 46.34 3.09
3397 3509 2.930562 AGGCCAACCTCCTCGCTT 60.931 61.111 5.01 0.00 46.34 4.68
3450 3562 2.091102 TATTACCGCCTAGGCCACGC 62.091 60.000 28.09 2.76 46.52 5.34
3451 3563 0.606604 ATATTACCGCCTAGGCCACG 59.393 55.000 28.09 17.33 46.52 4.94
3452 3564 3.967332 TTATATTACCGCCTAGGCCAC 57.033 47.619 28.09 1.00 46.52 5.01
3453 3565 4.287585 ACAATTATATTACCGCCTAGGCCA 59.712 41.667 28.09 10.72 46.52 5.36
3454 3566 4.840271 ACAATTATATTACCGCCTAGGCC 58.160 43.478 28.09 10.55 46.52 5.19
3455 3567 7.101700 AGTAACAATTATATTACCGCCTAGGC 58.898 38.462 24.75 24.75 46.52 3.93
3457 3569 8.025445 ACGAGTAACAATTATATTACCGCCTAG 58.975 37.037 0.00 0.00 32.74 3.02
3458 3570 7.885297 ACGAGTAACAATTATATTACCGCCTA 58.115 34.615 0.00 0.00 32.74 3.93
3459 3571 6.752168 ACGAGTAACAATTATATTACCGCCT 58.248 36.000 0.00 0.00 32.74 5.52
3460 3572 7.809806 ACTACGAGTAACAATTATATTACCGCC 59.190 37.037 0.00 0.00 32.74 6.13
3461 3573 8.633408 CACTACGAGTAACAATTATATTACCGC 58.367 37.037 0.00 0.00 32.74 5.68
3462 3574 9.669353 ACACTACGAGTAACAATTATATTACCG 57.331 33.333 0.00 11.42 32.67 4.02
3469 3581 8.922676 CACAAAGACACTACGAGTAACAATTAT 58.077 33.333 0.00 0.00 0.00 1.28
3470 3582 8.136800 TCACAAAGACACTACGAGTAACAATTA 58.863 33.333 0.00 0.00 0.00 1.40
3471 3583 6.982141 TCACAAAGACACTACGAGTAACAATT 59.018 34.615 0.00 0.00 0.00 2.32
3472 3584 6.509656 TCACAAAGACACTACGAGTAACAAT 58.490 36.000 0.00 0.00 0.00 2.71
3473 3585 5.893687 TCACAAAGACACTACGAGTAACAA 58.106 37.500 0.00 0.00 0.00 2.83
3474 3586 5.503662 TCACAAAGACACTACGAGTAACA 57.496 39.130 0.00 0.00 0.00 2.41
3475 3587 8.684973 ATAATCACAAAGACACTACGAGTAAC 57.315 34.615 0.00 0.00 0.00 2.50
3484 3596 9.342308 CACCCATATAATAATCACAAAGACACT 57.658 33.333 0.00 0.00 0.00 3.55
3485 3597 9.120538 ACACCCATATAATAATCACAAAGACAC 57.879 33.333 0.00 0.00 0.00 3.67
3486 3598 9.693739 AACACCCATATAATAATCACAAAGACA 57.306 29.630 0.00 0.00 0.00 3.41
3487 3599 9.950680 CAACACCCATATAATAATCACAAAGAC 57.049 33.333 0.00 0.00 0.00 3.01
3488 3600 9.913310 TCAACACCCATATAATAATCACAAAGA 57.087 29.630 0.00 0.00 0.00 2.52
3502 3614 7.888546 GCCCTAAACTAATATCAACACCCATAT 59.111 37.037 0.00 0.00 0.00 1.78
3503 3615 7.147284 TGCCCTAAACTAATATCAACACCCATA 60.147 37.037 0.00 0.00 0.00 2.74
3504 3616 6.068670 GCCCTAAACTAATATCAACACCCAT 58.931 40.000 0.00 0.00 0.00 4.00
3505 3617 5.044772 TGCCCTAAACTAATATCAACACCCA 60.045 40.000 0.00 0.00 0.00 4.51
3506 3618 5.442391 TGCCCTAAACTAATATCAACACCC 58.558 41.667 0.00 0.00 0.00 4.61
3507 3619 8.863872 ATATGCCCTAAACTAATATCAACACC 57.136 34.615 0.00 0.00 0.00 4.16
3524 3636 9.759473 ATGCTAATCAACTTATTTATATGCCCT 57.241 29.630 0.00 0.00 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.