Multiple sequence alignment - TraesCS3A01G132200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G132200 chr3A 100.000 5069 0 0 1 5069 108917858 108922926 0.000000e+00 9361.0
1 TraesCS3A01G132200 chr3A 92.027 602 43 5 872 1471 46616346 46615748 0.000000e+00 841.0
2 TraesCS3A01G132200 chr3A 84.472 805 86 14 1546 2346 46615749 46614980 0.000000e+00 758.0
3 TraesCS3A01G132200 chr3A 82.955 880 103 21 3419 4270 271639715 271640575 0.000000e+00 750.0
4 TraesCS3A01G132200 chr3A 91.051 447 24 11 4633 5069 696065476 696065916 1.570000e-164 590.0
5 TraesCS3A01G132200 chr3A 86.842 456 39 12 2399 2835 46614902 46614449 1.640000e-134 490.0
6 TraesCS3A01G132200 chr3A 87.025 447 37 11 2810 3237 46612013 46611569 7.630000e-133 484.0
7 TraesCS3A01G132200 chr3A 88.107 412 35 5 3770 4173 209650947 209651352 1.280000e-130 477.0
8 TraesCS3A01G132200 chr3A 88.251 383 35 7 2632 3004 271639329 271639711 2.780000e-122 449.0
9 TraesCS3A01G132200 chr3A 84.881 377 41 11 3400 3766 209642654 209643024 2.880000e-97 366.0
10 TraesCS3A01G132200 chr3A 87.500 264 23 6 3400 3663 46611502 46611249 3.840000e-76 296.0
11 TraesCS3A01G132200 chr3A 85.572 201 18 7 3043 3237 209642392 209642587 3.100000e-47 200.0
12 TraesCS3A01G132200 chr3A 94.521 73 3 1 1465 1537 507291580 507291509 1.490000e-20 111.0
13 TraesCS3A01G132200 chr3A 96.552 58 1 1 4597 4654 725959694 725959750 1.500000e-15 95.3
14 TraesCS3A01G132200 chr3A 93.103 58 4 0 4494 4551 108922142 108922199 9.040000e-13 86.1
15 TraesCS3A01G132200 chr3A 93.103 58 4 0 4285 4342 108922351 108922408 9.040000e-13 86.1
16 TraesCS3A01G132200 chr6A 99.181 3786 24 3 525 4305 461835925 461839708 0.000000e+00 6813.0
17 TraesCS3A01G132200 chr6A 92.711 439 12 7 4651 5069 111016858 111016420 2.590000e-172 616.0
18 TraesCS3A01G132200 chr6A 92.541 429 23 7 4647 5069 53948498 53948923 1.560000e-169 606.0
19 TraesCS3A01G132200 chr6A 96.465 198 7 0 4290 4487 461839727 461839924 1.360000e-85 327.0
20 TraesCS3A01G132200 chr6A 98.039 51 1 0 4501 4551 461839729 461839779 6.990000e-14 89.8
21 TraesCS3A01G132200 chr6B 94.949 4059 146 25 269 4298 499018475 499014447 0.000000e+00 6305.0
22 TraesCS3A01G132200 chr6B 83.126 883 98 27 3419 4270 605767146 605766284 0.000000e+00 758.0
23 TraesCS3A01G132200 chr6B 92.545 389 17 2 1 388 499018851 499018474 9.600000e-152 547.0
24 TraesCS3A01G132200 chr6B 83.289 377 29 11 2632 3000 605767504 605767154 2.950000e-82 316.0
25 TraesCS3A01G132200 chr6B 95.714 70 2 1 1469 1537 462028691 462028760 1.490000e-20 111.0
26 TraesCS3A01G132200 chr6B 89.024 82 9 0 1472 1553 408244953 408245034 8.980000e-18 102.0
27 TraesCS3A01G132200 chr6D 89.968 937 64 16 3400 4319 324521803 324522726 0.000000e+00 1182.0
28 TraesCS3A01G132200 chr6D 89.890 910 58 8 588 1471 324519136 324520037 0.000000e+00 1140.0
29 TraesCS3A01G132200 chr6D 90.658 653 45 8 1546 2189 324520036 324520681 0.000000e+00 854.0
30 TraesCS3A01G132200 chr6D 88.591 447 18 13 2807 3237 324521311 324521740 3.500000e-141 512.0
31 TraesCS3A01G132200 chr6D 88.532 436 30 11 1 426 324518222 324518647 1.260000e-140 510.0
32 TraesCS3A01G132200 chr6D 86.562 320 18 6 2436 2755 324521008 324521302 3.780000e-86 329.0
33 TraesCS3A01G132200 chr6D 94.203 138 7 1 3244 3380 124511793 124511930 5.140000e-50 209.0
34 TraesCS3A01G132200 chr3D 86.194 1072 90 29 2194 3237 35670489 35669448 0.000000e+00 1107.0
35 TraesCS3A01G132200 chr3D 86.296 737 77 18 1101 1825 35694926 35694202 0.000000e+00 780.0
36 TraesCS3A01G132200 chr3D 82.093 497 45 22 3706 4165 35669109 35668620 7.960000e-103 385.0
37 TraesCS3A01G132200 chr3D 85.057 348 36 12 1820 2161 35689494 35689157 1.750000e-89 340.0
38 TraesCS3A01G132200 chr3D 89.057 265 24 4 3400 3663 35669381 35669121 1.760000e-84 324.0
39 TraesCS3A01G132200 chrUn 87.500 864 72 24 2399 3237 39274866 39275718 0.000000e+00 965.0
40 TraesCS3A01G132200 chrUn 92.679 601 40 4 872 1471 39273139 39273736 0.000000e+00 863.0
41 TraesCS3A01G132200 chrUn 85.687 517 51 7 1546 2061 39273735 39274229 1.620000e-144 523.0
42 TraesCS3A01G132200 chrUn 90.566 265 16 7 3400 3657 39275785 39276047 4.860000e-90 342.0
43 TraesCS3A01G132200 chrUn 94.203 138 7 1 3244 3380 402628903 402628766 5.140000e-50 209.0
44 TraesCS3A01G132200 chrUn 80.952 147 21 7 2201 2346 39274649 39274789 5.370000e-20 110.0
45 TraesCS3A01G132200 chrUn 98.214 56 1 0 4599 4654 35797337 35797392 1.160000e-16 99.0
46 TraesCS3A01G132200 chr7A 84.886 880 86 19 3419 4270 165528857 165529717 0.000000e+00 845.0
47 TraesCS3A01G132200 chr7A 96.419 363 12 1 4653 5014 650307472 650307110 9.390000e-167 597.0
48 TraesCS3A01G132200 chr7A 91.962 423 26 6 4654 5069 312551178 312550757 2.030000e-163 586.0
49 TraesCS3A01G132200 chr7A 88.802 384 28 11 2632 3004 165528474 165528853 1.660000e-124 457.0
50 TraesCS3A01G132200 chr7A 95.161 62 2 1 4593 4654 456258782 456258722 4.180000e-16 97.1
51 TraesCS3A01G132200 chr7A 96.552 58 2 0 4597 4654 667485962 667485905 4.180000e-16 97.1
52 TraesCS3A01G132200 chr1D 84.307 873 103 19 3419 4270 28959755 28958896 0.000000e+00 822.0
53 TraesCS3A01G132200 chr1D 94.203 138 7 1 3244 3380 12982860 12982997 5.140000e-50 209.0
54 TraesCS3A01G132200 chr5A 83.523 880 98 20 3419 4270 237942087 237941227 0.000000e+00 778.0
55 TraesCS3A01G132200 chr5A 93.587 421 22 4 4651 5069 592838247 592838664 1.550000e-174 623.0
56 TraesCS3A01G132200 chr5A 96.429 364 12 1 4652 5014 523159186 523159549 2.610000e-167 599.0
57 TraesCS3A01G132200 chr5A 92.143 420 26 5 4654 5069 30068324 30068740 2.030000e-163 586.0
58 TraesCS3A01G132200 chr5A 91.924 421 22 7 4654 5067 605585531 605585946 3.400000e-161 579.0
59 TraesCS3A01G132200 chr5A 89.556 383 29 8 2632 3004 237942472 237942091 4.590000e-130 475.0
60 TraesCS3A01G132200 chr7D 86.996 669 58 13 804 1471 72448015 72447375 0.000000e+00 726.0
61 TraesCS3A01G132200 chr7D 80.236 339 28 12 1546 1849 72447376 72447042 8.540000e-53 219.0
62 TraesCS3A01G132200 chr7D 94.203 138 7 1 3244 3380 203494267 203494404 5.140000e-50 209.0
63 TraesCS3A01G132200 chr7D 94.203 138 7 1 3244 3380 381914245 381914382 5.140000e-50 209.0
64 TraesCS3A01G132200 chr7D 94.203 138 7 1 3244 3380 381979494 381979357 5.140000e-50 209.0
65 TraesCS3A01G132200 chr2B 82.072 859 97 34 3405 4220 62995174 62994330 0.000000e+00 680.0
66 TraesCS3A01G132200 chr2B 86.942 582 62 6 877 1452 62996415 62995842 4.280000e-180 641.0
67 TraesCS3A01G132200 chr2B 84.272 426 42 14 2836 3237 62995670 62995246 4.760000e-105 392.0
68 TraesCS3A01G132200 chr2B 93.846 65 4 0 4590 4654 77779608 77779544 1.160000e-16 99.0
69 TraesCS3A01G132200 chr2B 96.552 58 2 0 4597 4654 708354208 708354265 4.180000e-16 97.1
70 TraesCS3A01G132200 chr2B 90.141 71 6 1 4584 4654 562867347 562867278 1.940000e-14 91.6
71 TraesCS3A01G132200 chr2A 82.596 701 81 19 760 1452 40561175 40560508 9.460000e-162 580.0
72 TraesCS3A01G132200 chr2A 81.688 557 47 22 3403 3925 40559562 40559027 3.650000e-111 412.0
73 TraesCS3A01G132200 chr2A 85.323 402 37 9 2817 3200 40560072 40559675 3.680000e-106 396.0
74 TraesCS3A01G132200 chr2D 86.726 452 47 8 1001 1450 36584578 36584138 1.640000e-134 490.0
75 TraesCS3A01G132200 chr2D 84.928 418 40 11 3824 4222 36583257 36582844 7.910000e-108 401.0
76 TraesCS3A01G132200 chr2D 94.203 138 6 2 3244 3380 39525326 39525462 5.140000e-50 209.0
77 TraesCS3A01G132200 chr2D 95.588 68 3 0 1470 1537 512165838 512165905 5.370000e-20 110.0
78 TraesCS3A01G132200 chr2D 92.958 71 5 0 1467 1537 564093468 564093398 2.500000e-18 104.0
79 TraesCS3A01G132200 chr3B 95.522 67 2 1 1472 1537 474402086 474402020 6.940000e-19 106.0
80 TraesCS3A01G132200 chr7B 92.958 71 5 0 1467 1537 428965934 428965864 2.500000e-18 104.0
81 TraesCS3A01G132200 chr4B 95.000 60 3 0 4594 4653 211658812 211658871 1.500000e-15 95.3
82 TraesCS3A01G132200 chr1B 95.082 61 2 1 4594 4654 136920960 136921019 1.500000e-15 95.3
83 TraesCS3A01G132200 chr1A 87.879 66 7 1 1583 1647 68373695 68373760 5.440000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G132200 chr3A 108917858 108922926 5068 False 3177.733333 9361 95.402000 1 5069 3 chr3A.!!$F4 5068
1 TraesCS3A01G132200 chr3A 271639329 271640575 1246 False 599.500000 750 85.603000 2632 4270 2 chr3A.!!$F6 1638
2 TraesCS3A01G132200 chr3A 46611249 46616346 5097 True 573.800000 841 87.573200 872 3663 5 chr3A.!!$R2 2791
3 TraesCS3A01G132200 chr3A 209642392 209643024 632 False 283.000000 366 85.226500 3043 3766 2 chr3A.!!$F5 723
4 TraesCS3A01G132200 chr6A 461835925 461839924 3999 False 2409.933333 6813 97.895000 525 4551 3 chr6A.!!$F2 4026
5 TraesCS3A01G132200 chr6B 499014447 499018851 4404 True 3426.000000 6305 93.747000 1 4298 2 chr6B.!!$R1 4297
6 TraesCS3A01G132200 chr6B 605766284 605767504 1220 True 537.000000 758 83.207500 2632 4270 2 chr6B.!!$R2 1638
7 TraesCS3A01G132200 chr6D 324518222 324522726 4504 False 754.500000 1182 89.033500 1 4319 6 chr6D.!!$F2 4318
8 TraesCS3A01G132200 chr3D 35694202 35694926 724 True 780.000000 780 86.296000 1101 1825 1 chr3D.!!$R2 724
9 TraesCS3A01G132200 chr3D 35668620 35670489 1869 True 605.333333 1107 85.781333 2194 4165 3 chr3D.!!$R3 1971
10 TraesCS3A01G132200 chrUn 39273139 39276047 2908 False 560.600000 965 87.476800 872 3657 5 chrUn.!!$F2 2785
11 TraesCS3A01G132200 chr7A 165528474 165529717 1243 False 651.000000 845 86.844000 2632 4270 2 chr7A.!!$F1 1638
12 TraesCS3A01G132200 chr1D 28958896 28959755 859 True 822.000000 822 84.307000 3419 4270 1 chr1D.!!$R1 851
13 TraesCS3A01G132200 chr5A 237941227 237942472 1245 True 626.500000 778 86.539500 2632 4270 2 chr5A.!!$R1 1638
14 TraesCS3A01G132200 chr7D 72447042 72448015 973 True 472.500000 726 83.616000 804 1849 2 chr7D.!!$R2 1045
15 TraesCS3A01G132200 chr2B 62994330 62996415 2085 True 571.000000 680 84.428667 877 4220 3 chr2B.!!$R3 3343
16 TraesCS3A01G132200 chr2A 40559027 40561175 2148 True 462.666667 580 83.202333 760 3925 3 chr2A.!!$R1 3165
17 TraesCS3A01G132200 chr2D 36582844 36584578 1734 True 445.500000 490 85.827000 1001 4222 2 chr2D.!!$R2 3221

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
340 481 0.601841 GGCTTGCAACAGCAAAGCAT 60.602 50.000 12.28 0.0 46.62 3.79 F
428 570 5.220835 GGGTTTGATTTTTCAAAAGGTGCTG 60.221 40.000 2.93 0.0 40.70 4.41 F
2610 3738 3.686916 TGTTGGGAATGTGTCGACATA 57.313 42.857 23.12 20.3 42.30 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1464 1970 3.181410 TGGGACGGAGGGAGTATATCAAT 60.181 47.826 0.00 0.00 0.00 2.57 R
2612 3740 3.738246 CAGTGGCTGCTGCTGCTG 61.738 66.667 26.79 16.73 40.48 4.41 R
4650 8456 0.033504 CCGGTTCTGCACTAGTGTGT 59.966 55.000 23.44 0.00 45.44 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 89 2.158971 GGTTGTGGTTTCATTGCCTTGT 60.159 45.455 0.00 0.00 0.00 3.16
191 200 8.549548 TCTGCATTTAATTGTCATTTTGTTGTG 58.450 29.630 0.00 0.00 0.00 3.33
272 292 1.952990 CAAGTACACCCATGCACACAA 59.047 47.619 0.00 0.00 0.00 3.33
282 302 4.774726 ACCCATGCACACAACCAAATATTA 59.225 37.500 0.00 0.00 0.00 0.98
339 480 1.227321 GGCTTGCAACAGCAAAGCA 60.227 52.632 12.28 0.00 46.62 3.91
340 481 0.601841 GGCTTGCAACAGCAAAGCAT 60.602 50.000 12.28 0.00 46.62 3.79
428 570 5.220835 GGGTTTGATTTTTCAAAAGGTGCTG 60.221 40.000 2.93 0.00 40.70 4.41
460 627 8.474025 TGTTTGTAACCATATCCATCATTTTCC 58.526 33.333 0.00 0.00 0.00 3.13
461 628 8.474025 GTTTGTAACCATATCCATCATTTTCCA 58.526 33.333 0.00 0.00 0.00 3.53
2367 3466 9.034800 TCCAAACAAGAATTATTGAAATAGGCT 57.965 29.630 19.19 0.00 34.20 4.58
2610 3738 3.686916 TGTTGGGAATGTGTCGACATA 57.313 42.857 23.12 20.30 42.30 2.29
2611 3739 3.595173 TGTTGGGAATGTGTCGACATAG 58.405 45.455 23.12 0.00 42.30 2.23
2612 3740 2.309528 TGGGAATGTGTCGACATAGC 57.690 50.000 23.12 14.61 42.30 2.97
2740 3879 3.111484 TGTGCAGTGATGGAGGGTTATA 58.889 45.455 0.00 0.00 0.00 0.98
3239 6881 7.774134 TGTAAGGATCTGTACATTTAAGCGTA 58.226 34.615 0.00 0.00 0.00 4.42
3438 7102 4.037208 CAGTCATGTGCTTCAAGTTTTCCT 59.963 41.667 0.00 0.00 0.00 3.36
3624 7305 0.251354 ATGCTCTCCACGATGCAACT 59.749 50.000 0.00 0.00 38.96 3.16
3969 7704 2.878406 GTTGACACTGCAAAGGAAGCTA 59.122 45.455 0.00 0.00 0.00 3.32
4006 7741 1.483827 CAGGCTCAGTATCAGCTGGAA 59.516 52.381 15.13 0.00 37.05 3.53
4126 7893 2.910319 TCCAGAGGCAAGCTTACCTTTA 59.090 45.455 19.51 3.29 36.05 1.85
4195 7967 3.356290 CCAAAAAGGCTATACTGGTGCT 58.644 45.455 0.00 0.00 0.00 4.40
4243 8015 7.624360 TGAAATCGGAGTATGCTTTATGTTT 57.376 32.000 0.00 0.00 0.00 2.83
4297 8103 9.806448 AGTTATAATGCATTCTCTCTCTCTCTA 57.194 33.333 16.86 0.00 0.00 2.43
4468 8274 2.038295 GCACTGCTGCCTTATCTATCCT 59.962 50.000 0.00 0.00 37.45 3.24
4482 8288 7.439655 CCTTATCTATCCTCTTTGTTTTCCTCG 59.560 40.741 0.00 0.00 0.00 4.63
4487 8293 2.222027 CTCTTTGTTTTCCTCGCCACT 58.778 47.619 0.00 0.00 0.00 4.00
4488 8294 2.218603 TCTTTGTTTTCCTCGCCACTC 58.781 47.619 0.00 0.00 0.00 3.51
4489 8295 2.158813 TCTTTGTTTTCCTCGCCACTCT 60.159 45.455 0.00 0.00 0.00 3.24
4490 8296 1.878953 TTGTTTTCCTCGCCACTCTC 58.121 50.000 0.00 0.00 0.00 3.20
4491 8297 1.048601 TGTTTTCCTCGCCACTCTCT 58.951 50.000 0.00 0.00 0.00 3.10
4492 8298 1.000955 TGTTTTCCTCGCCACTCTCTC 59.999 52.381 0.00 0.00 0.00 3.20
4493 8299 1.273886 GTTTTCCTCGCCACTCTCTCT 59.726 52.381 0.00 0.00 0.00 3.10
4494 8300 1.178276 TTTCCTCGCCACTCTCTCTC 58.822 55.000 0.00 0.00 0.00 3.20
4495 8301 0.329931 TTCCTCGCCACTCTCTCTCT 59.670 55.000 0.00 0.00 0.00 3.10
4496 8302 0.107410 TCCTCGCCACTCTCTCTCTC 60.107 60.000 0.00 0.00 0.00 3.20
4497 8303 0.107214 CCTCGCCACTCTCTCTCTCT 60.107 60.000 0.00 0.00 0.00 3.10
4498 8304 1.299541 CTCGCCACTCTCTCTCTCTC 58.700 60.000 0.00 0.00 0.00 3.20
4499 8305 0.107410 TCGCCACTCTCTCTCTCTCC 60.107 60.000 0.00 0.00 0.00 3.71
4500 8306 1.101049 CGCCACTCTCTCTCTCTCCC 61.101 65.000 0.00 0.00 0.00 4.30
4501 8307 0.258774 GCCACTCTCTCTCTCTCCCT 59.741 60.000 0.00 0.00 0.00 4.20
4502 8308 1.750682 GCCACTCTCTCTCTCTCCCTC 60.751 61.905 0.00 0.00 0.00 4.30
4503 8309 1.133792 CCACTCTCTCTCTCTCCCTCC 60.134 61.905 0.00 0.00 0.00 4.30
4504 8310 1.133792 CACTCTCTCTCTCTCCCTCCC 60.134 61.905 0.00 0.00 0.00 4.30
4505 8311 1.275002 ACTCTCTCTCTCTCCCTCCCT 60.275 57.143 0.00 0.00 0.00 4.20
4506 8312 1.421646 CTCTCTCTCTCTCCCTCCCTC 59.578 61.905 0.00 0.00 0.00 4.30
4507 8313 1.010793 TCTCTCTCTCTCCCTCCCTCT 59.989 57.143 0.00 0.00 0.00 3.69
4508 8314 1.421646 CTCTCTCTCTCCCTCCCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
4509 8315 1.010793 TCTCTCTCTCCCTCCCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
4510 8316 1.421646 CTCTCTCTCCCTCCCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
4511 8317 1.010793 TCTCTCTCCCTCCCTCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
4512 8318 1.421646 CTCTCTCCCTCCCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
4513 8319 1.010793 TCTCTCCCTCCCTCTCTCTCT 59.989 57.143 0.00 0.00 0.00 3.10
4514 8320 2.251605 TCTCTCCCTCCCTCTCTCTCTA 59.748 54.545 0.00 0.00 0.00 2.43
4515 8321 2.372172 CTCTCCCTCCCTCTCTCTCTAC 59.628 59.091 0.00 0.00 0.00 2.59
4516 8322 2.131854 CTCCCTCCCTCTCTCTCTACA 58.868 57.143 0.00 0.00 0.00 2.74
4517 8323 2.716424 CTCCCTCCCTCTCTCTCTACAT 59.284 54.545 0.00 0.00 0.00 2.29
4518 8324 3.135279 TCCCTCCCTCTCTCTCTACATT 58.865 50.000 0.00 0.00 0.00 2.71
4519 8325 4.316872 TCCCTCCCTCTCTCTCTACATTA 58.683 47.826 0.00 0.00 0.00 1.90
4520 8326 4.105057 TCCCTCCCTCTCTCTCTACATTAC 59.895 50.000 0.00 0.00 0.00 1.89
4521 8327 4.403734 CCTCCCTCTCTCTCTACATTACC 58.596 52.174 0.00 0.00 0.00 2.85
4522 8328 4.105697 CCTCCCTCTCTCTCTACATTACCT 59.894 50.000 0.00 0.00 0.00 3.08
4523 8329 5.399727 CCTCCCTCTCTCTCTACATTACCTT 60.400 48.000 0.00 0.00 0.00 3.50
4524 8330 5.450453 TCCCTCTCTCTCTACATTACCTTG 58.550 45.833 0.00 0.00 0.00 3.61
4525 8331 4.586841 CCCTCTCTCTCTACATTACCTTGG 59.413 50.000 0.00 0.00 0.00 3.61
4526 8332 4.586841 CCTCTCTCTCTACATTACCTTGGG 59.413 50.000 0.00 0.00 0.00 4.12
4527 8333 5.450453 CTCTCTCTCTACATTACCTTGGGA 58.550 45.833 0.00 0.00 0.00 4.37
4528 8334 5.450453 TCTCTCTCTACATTACCTTGGGAG 58.550 45.833 0.00 0.00 0.00 4.30
4529 8335 5.044030 TCTCTCTCTACATTACCTTGGGAGT 60.044 44.000 0.00 0.00 0.00 3.85
4530 8336 6.159928 TCTCTCTCTACATTACCTTGGGAGTA 59.840 42.308 0.00 0.00 0.00 2.59
4531 8337 6.923670 TCTCTCTACATTACCTTGGGAGTAT 58.076 40.000 0.00 0.00 0.00 2.12
4532 8338 7.363031 TCTCTCTACATTACCTTGGGAGTATT 58.637 38.462 0.00 0.00 0.00 1.89
4533 8339 8.508601 TCTCTCTACATTACCTTGGGAGTATTA 58.491 37.037 0.00 0.00 0.00 0.98
4534 8340 8.707796 TCTCTACATTACCTTGGGAGTATTAG 57.292 38.462 0.00 0.00 0.00 1.73
4535 8341 8.287350 TCTCTACATTACCTTGGGAGTATTAGT 58.713 37.037 0.00 0.00 0.00 2.24
4536 8342 9.584008 CTCTACATTACCTTGGGAGTATTAGTA 57.416 37.037 0.00 0.00 0.00 1.82
4543 8349 7.569599 ACCTTGGGAGTATTAGTATTATGGG 57.430 40.000 0.00 0.00 0.00 4.00
4544 8350 7.318401 ACCTTGGGAGTATTAGTATTATGGGA 58.682 38.462 0.00 0.00 0.00 4.37
4545 8351 7.797617 ACCTTGGGAGTATTAGTATTATGGGAA 59.202 37.037 0.00 0.00 0.00 3.97
4546 8352 8.665906 CCTTGGGAGTATTAGTATTATGGGAAA 58.334 37.037 0.00 0.00 0.00 3.13
4547 8353 9.726438 CTTGGGAGTATTAGTATTATGGGAAAG 57.274 37.037 0.00 0.00 0.00 2.62
4548 8354 8.214721 TGGGAGTATTAGTATTATGGGAAAGG 57.785 38.462 0.00 0.00 0.00 3.11
4549 8355 8.020253 TGGGAGTATTAGTATTATGGGAAAGGA 58.980 37.037 0.00 0.00 0.00 3.36
4550 8356 8.887393 GGGAGTATTAGTATTATGGGAAAGGAA 58.113 37.037 0.00 0.00 0.00 3.36
4551 8357 9.722184 GGAGTATTAGTATTATGGGAAAGGAAC 57.278 37.037 0.00 0.00 0.00 3.62
4556 8362 8.855804 TTAGTATTATGGGAAAGGAACTCTCT 57.144 34.615 0.00 0.00 38.49 3.10
4557 8363 7.368198 AGTATTATGGGAAAGGAACTCTCTC 57.632 40.000 0.00 0.00 38.49 3.20
4558 8364 7.136203 AGTATTATGGGAAAGGAACTCTCTCT 58.864 38.462 0.00 0.00 38.49 3.10
4559 8365 5.941555 TTATGGGAAAGGAACTCTCTCTC 57.058 43.478 0.00 0.00 38.49 3.20
4560 8366 3.551635 TGGGAAAGGAACTCTCTCTCT 57.448 47.619 0.00 0.00 38.49 3.10
4561 8367 3.436243 TGGGAAAGGAACTCTCTCTCTC 58.564 50.000 0.00 0.00 38.49 3.20
4562 8368 3.076785 TGGGAAAGGAACTCTCTCTCTCT 59.923 47.826 0.00 0.00 38.49 3.10
4563 8369 3.699538 GGGAAAGGAACTCTCTCTCTCTC 59.300 52.174 0.00 0.00 38.49 3.20
4564 8370 4.569865 GGGAAAGGAACTCTCTCTCTCTCT 60.570 50.000 0.00 0.00 38.49 3.10
4565 8371 4.640647 GGAAAGGAACTCTCTCTCTCTCTC 59.359 50.000 0.00 0.00 38.49 3.20
4566 8372 3.933861 AGGAACTCTCTCTCTCTCTCC 57.066 52.381 0.00 0.00 0.00 3.71
4567 8373 2.509964 AGGAACTCTCTCTCTCTCTCCC 59.490 54.545 0.00 0.00 0.00 4.30
4568 8374 2.509964 GGAACTCTCTCTCTCTCTCCCT 59.490 54.545 0.00 0.00 0.00 4.20
4569 8375 3.053619 GGAACTCTCTCTCTCTCTCCCTT 60.054 52.174 0.00 0.00 0.00 3.95
4570 8376 4.569865 GGAACTCTCTCTCTCTCTCCCTTT 60.570 50.000 0.00 0.00 0.00 3.11
4571 8377 4.236527 ACTCTCTCTCTCTCTCCCTTTC 57.763 50.000 0.00 0.00 0.00 2.62
4572 8378 3.852578 ACTCTCTCTCTCTCTCCCTTTCT 59.147 47.826 0.00 0.00 0.00 2.52
4573 8379 4.080299 ACTCTCTCTCTCTCTCCCTTTCTC 60.080 50.000 0.00 0.00 0.00 2.87
4574 8380 3.202151 TCTCTCTCTCTCTCCCTTTCTCC 59.798 52.174 0.00 0.00 0.00 3.71
4575 8381 2.243736 TCTCTCTCTCTCCCTTTCTCCC 59.756 54.545 0.00 0.00 0.00 4.30
4576 8382 2.244769 CTCTCTCTCTCCCTTTCTCCCT 59.755 54.545 0.00 0.00 0.00 4.20
4577 8383 2.243736 TCTCTCTCTCCCTTTCTCCCTC 59.756 54.545 0.00 0.00 0.00 4.30
4578 8384 2.244769 CTCTCTCTCCCTTTCTCCCTCT 59.755 54.545 0.00 0.00 0.00 3.69
4579 8385 2.243736 TCTCTCTCCCTTTCTCCCTCTC 59.756 54.545 0.00 0.00 0.00 3.20
4580 8386 2.244769 CTCTCTCCCTTTCTCCCTCTCT 59.755 54.545 0.00 0.00 0.00 3.10
4581 8387 2.243736 TCTCTCCCTTTCTCCCTCTCTC 59.756 54.545 0.00 0.00 0.00 3.20
4582 8388 2.244769 CTCTCCCTTTCTCCCTCTCTCT 59.755 54.545 0.00 0.00 0.00 3.10
4583 8389 2.243736 TCTCCCTTTCTCCCTCTCTCTC 59.756 54.545 0.00 0.00 0.00 3.20
4584 8390 2.244769 CTCCCTTTCTCCCTCTCTCTCT 59.755 54.545 0.00 0.00 0.00 3.10
4585 8391 3.461831 CTCCCTTTCTCCCTCTCTCTCTA 59.538 52.174 0.00 0.00 0.00 2.43
4586 8392 3.203487 TCCCTTTCTCCCTCTCTCTCTAC 59.797 52.174 0.00 0.00 0.00 2.59
4587 8393 3.053245 CCCTTTCTCCCTCTCTCTCTACA 60.053 52.174 0.00 0.00 0.00 2.74
4588 8394 4.387437 CCCTTTCTCCCTCTCTCTCTACAT 60.387 50.000 0.00 0.00 0.00 2.29
4589 8395 5.208121 CCTTTCTCCCTCTCTCTCTACATT 58.792 45.833 0.00 0.00 0.00 2.71
4590 8396 6.369629 CCTTTCTCCCTCTCTCTCTACATTA 58.630 44.000 0.00 0.00 0.00 1.90
4591 8397 6.264518 CCTTTCTCCCTCTCTCTCTACATTAC 59.735 46.154 0.00 0.00 0.00 1.89
4592 8398 5.313280 TCTCCCTCTCTCTCTACATTACC 57.687 47.826 0.00 0.00 0.00 2.85
4593 8399 4.979039 TCTCCCTCTCTCTCTACATTACCT 59.021 45.833 0.00 0.00 0.00 3.08
4594 8400 5.433712 TCTCCCTCTCTCTCTACATTACCTT 59.566 44.000 0.00 0.00 0.00 3.50
4595 8401 5.450453 TCCCTCTCTCTCTACATTACCTTG 58.550 45.833 0.00 0.00 0.00 3.61
4596 8402 4.586841 CCCTCTCTCTCTACATTACCTTGG 59.413 50.000 0.00 0.00 0.00 3.61
4597 8403 4.586841 CCTCTCTCTCTACATTACCTTGGG 59.413 50.000 0.00 0.00 0.00 4.12
4598 8404 5.450453 CTCTCTCTCTACATTACCTTGGGA 58.550 45.833 0.00 0.00 0.00 4.37
4599 8405 5.450453 TCTCTCTCTACATTACCTTGGGAG 58.550 45.833 0.00 0.00 0.00 4.30
4600 8406 5.044030 TCTCTCTCTACATTACCTTGGGAGT 60.044 44.000 0.00 0.00 0.00 3.85
4601 8407 6.159928 TCTCTCTCTACATTACCTTGGGAGTA 59.840 42.308 0.00 0.00 0.00 2.59
4602 8408 6.923670 TCTCTCTACATTACCTTGGGAGTAT 58.076 40.000 0.00 0.00 0.00 2.12
4603 8409 7.363031 TCTCTCTACATTACCTTGGGAGTATT 58.637 38.462 0.00 0.00 0.00 1.89
4604 8410 7.844779 TCTCTCTACATTACCTTGGGAGTATTT 59.155 37.037 0.00 0.00 0.00 1.40
4605 8411 8.388656 TCTCTACATTACCTTGGGAGTATTTT 57.611 34.615 0.00 0.00 0.00 1.82
4606 8412 8.832735 TCTCTACATTACCTTGGGAGTATTTTT 58.167 33.333 0.00 0.00 0.00 1.94
4630 8436 3.917988 TGAGCATCAGTACAGACACAAG 58.082 45.455 0.00 0.00 42.56 3.16
4631 8437 2.670414 GAGCATCAGTACAGACACAAGC 59.330 50.000 0.00 0.00 33.17 4.01
4632 8438 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
4633 8439 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
4634 8440 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
4635 8441 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
4636 8442 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
4637 8443 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
4638 8444 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
4639 8445 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
4640 8446 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
4641 8447 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
4642 8448 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
4643 8449 3.243877 CAGACACAAGCGCTCATATACAC 59.756 47.826 12.06 0.00 0.00 2.90
4644 8450 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
4651 8457 3.954030 CGCTCATATACACGCACATAC 57.046 47.619 0.00 0.00 0.00 2.39
4652 8458 3.305110 CGCTCATATACACGCACATACA 58.695 45.455 0.00 0.00 0.00 2.29
4653 8459 3.119628 CGCTCATATACACGCACATACAC 59.880 47.826 0.00 0.00 0.00 2.90
4654 8460 4.048504 GCTCATATACACGCACATACACA 58.951 43.478 0.00 0.00 0.00 3.72
4655 8461 4.085055 GCTCATATACACGCACATACACAC 60.085 45.833 0.00 0.00 0.00 3.82
4656 8462 5.257082 TCATATACACGCACATACACACT 57.743 39.130 0.00 0.00 0.00 3.55
4657 8463 6.380095 TCATATACACGCACATACACACTA 57.620 37.500 0.00 0.00 0.00 2.74
4658 8464 6.435428 TCATATACACGCACATACACACTAG 58.565 40.000 0.00 0.00 0.00 2.57
4659 8465 4.713824 ATACACGCACATACACACTAGT 57.286 40.909 0.00 0.00 0.00 2.57
4669 8475 2.827604 CACACTAGTGCAGAACCGG 58.172 57.895 22.90 0.00 39.21 5.28
4670 8476 0.670546 CACACTAGTGCAGAACCGGG 60.671 60.000 22.90 0.00 39.21 5.73
4671 8477 1.741770 CACTAGTGCAGAACCGGGC 60.742 63.158 10.54 0.00 0.00 6.13
4672 8478 2.214216 ACTAGTGCAGAACCGGGCA 61.214 57.895 6.32 1.81 37.77 5.36
4673 8479 1.003839 CTAGTGCAGAACCGGGCAA 60.004 57.895 6.32 0.00 42.45 4.52
4674 8480 0.392998 CTAGTGCAGAACCGGGCAAT 60.393 55.000 6.32 7.58 42.45 3.56
4675 8481 0.906066 TAGTGCAGAACCGGGCAATA 59.094 50.000 6.32 6.43 42.45 1.90
4676 8482 0.392998 AGTGCAGAACCGGGCAATAG 60.393 55.000 6.32 0.00 42.45 1.73
4677 8483 1.748879 TGCAGAACCGGGCAATAGC 60.749 57.895 6.32 2.35 37.03 2.97
4678 8484 1.748879 GCAGAACCGGGCAATAGCA 60.749 57.895 6.32 0.00 44.61 3.49
4679 8485 1.993369 GCAGAACCGGGCAATAGCAC 61.993 60.000 6.32 0.00 44.61 4.40
4680 8486 1.077716 AGAACCGGGCAATAGCACC 60.078 57.895 6.32 0.00 42.77 5.01
4684 8490 2.437716 CGGGCAATAGCACCGGTT 60.438 61.111 2.97 0.00 45.12 4.44
4685 8491 2.469516 CGGGCAATAGCACCGGTTC 61.470 63.158 2.97 0.00 45.12 3.62
4686 8492 2.469516 GGGCAATAGCACCGGTTCG 61.470 63.158 2.97 0.00 44.61 3.95
4687 8493 1.743995 GGCAATAGCACCGGTTCGT 60.744 57.895 2.97 0.00 44.61 3.85
4688 8494 0.460635 GGCAATAGCACCGGTTCGTA 60.461 55.000 2.97 0.00 44.61 3.43
4689 8495 1.361793 GCAATAGCACCGGTTCGTAA 58.638 50.000 2.97 0.00 41.58 3.18
4690 8496 1.326548 GCAATAGCACCGGTTCGTAAG 59.673 52.381 2.97 0.00 41.58 2.34
4691 8497 1.931172 CAATAGCACCGGTTCGTAAGG 59.069 52.381 2.97 0.00 38.47 2.69
4692 8498 0.179092 ATAGCACCGGTTCGTAAGGC 60.179 55.000 2.97 2.83 38.47 4.35
4693 8499 2.229690 TAGCACCGGTTCGTAAGGCC 62.230 60.000 2.97 0.00 38.47 5.19
4694 8500 2.435410 CACCGGTTCGTAAGGCCC 60.435 66.667 2.97 0.00 38.47 5.80
4695 8501 2.605601 ACCGGTTCGTAAGGCCCT 60.606 61.111 0.00 0.00 38.47 5.19
4696 8502 2.219164 ACCGGTTCGTAAGGCCCTT 61.219 57.895 0.00 0.00 38.47 3.95
4697 8503 1.002990 CCGGTTCGTAAGGCCCTTT 60.003 57.895 0.00 0.00 38.47 3.11
4698 8504 0.249955 CCGGTTCGTAAGGCCCTTTA 59.750 55.000 0.00 0.00 38.47 1.85
4699 8505 1.648504 CGGTTCGTAAGGCCCTTTAG 58.351 55.000 0.00 0.00 38.47 1.85
4700 8506 1.066645 CGGTTCGTAAGGCCCTTTAGT 60.067 52.381 0.00 0.00 38.47 2.24
4701 8507 2.353323 GGTTCGTAAGGCCCTTTAGTG 58.647 52.381 0.00 0.00 38.47 2.74
4702 8508 1.736126 GTTCGTAAGGCCCTTTAGTGC 59.264 52.381 0.00 0.00 38.47 4.40
4707 8513 2.035155 GGCCCTTTAGTGCCGGTT 59.965 61.111 1.90 0.00 38.00 4.44
4708 8514 1.605451 GGCCCTTTAGTGCCGGTTT 60.605 57.895 1.90 0.00 38.00 3.27
4709 8515 1.584495 GCCCTTTAGTGCCGGTTTG 59.416 57.895 1.90 0.00 0.00 2.93
4710 8516 1.873270 GCCCTTTAGTGCCGGTTTGG 61.873 60.000 1.90 0.00 42.50 3.28
4711 8517 0.538746 CCCTTTAGTGCCGGTTTGGT 60.539 55.000 1.90 0.00 41.21 3.67
4712 8518 1.271488 CCCTTTAGTGCCGGTTTGGTA 60.271 52.381 1.90 0.00 41.21 3.25
4713 8519 2.506444 CCTTTAGTGCCGGTTTGGTAA 58.494 47.619 1.90 0.00 41.21 2.85
4714 8520 2.227149 CCTTTAGTGCCGGTTTGGTAAC 59.773 50.000 1.90 0.00 41.21 2.50
4721 8527 4.366603 GGTTTGGTAACCGACGCT 57.633 55.556 0.00 0.00 44.12 5.07
4722 8528 3.512978 GGTTTGGTAACCGACGCTA 57.487 52.632 0.00 0.00 44.12 4.26
4723 8529 1.794512 GGTTTGGTAACCGACGCTAA 58.205 50.000 0.00 0.00 44.12 3.09
4724 8530 2.142319 GGTTTGGTAACCGACGCTAAA 58.858 47.619 0.00 0.00 44.12 1.85
4725 8531 2.547634 GGTTTGGTAACCGACGCTAAAA 59.452 45.455 0.00 0.00 44.12 1.52
4726 8532 3.189080 GGTTTGGTAACCGACGCTAAAAT 59.811 43.478 0.00 0.00 44.12 1.82
4727 8533 4.391523 GGTTTGGTAACCGACGCTAAAATA 59.608 41.667 0.00 0.00 44.12 1.40
4728 8534 5.065090 GGTTTGGTAACCGACGCTAAAATAT 59.935 40.000 0.00 0.00 44.12 1.28
4729 8535 6.257630 GGTTTGGTAACCGACGCTAAAATATA 59.742 38.462 0.00 0.00 44.12 0.86
4730 8536 7.339953 GTTTGGTAACCGACGCTAAAATATAG 58.660 38.462 0.00 0.00 0.00 1.31
4731 8537 5.531634 TGGTAACCGACGCTAAAATATAGG 58.468 41.667 0.00 0.00 0.00 2.57
4732 8538 4.386954 GGTAACCGACGCTAAAATATAGGC 59.613 45.833 0.00 0.00 0.00 3.93
4733 8539 3.738830 ACCGACGCTAAAATATAGGCA 57.261 42.857 0.00 0.00 0.00 4.75
4734 8540 3.387397 ACCGACGCTAAAATATAGGCAC 58.613 45.455 0.00 0.00 0.00 5.01
4735 8541 3.069158 ACCGACGCTAAAATATAGGCACT 59.931 43.478 0.00 0.00 46.37 4.40
4762 8568 1.278537 CCCCCTTTAGTACCGGTTCA 58.721 55.000 15.04 0.00 0.00 3.18
4763 8569 1.629861 CCCCCTTTAGTACCGGTTCAA 59.370 52.381 15.04 1.02 0.00 2.69
4764 8570 2.616256 CCCCCTTTAGTACCGGTTCAAC 60.616 54.545 15.04 4.79 0.00 3.18
4765 8571 2.038820 CCCCTTTAGTACCGGTTCAACA 59.961 50.000 15.04 0.00 0.00 3.33
4766 8572 3.069289 CCCTTTAGTACCGGTTCAACAC 58.931 50.000 15.04 3.84 0.00 3.32
4767 8573 2.733026 CCTTTAGTACCGGTTCAACACG 59.267 50.000 15.04 0.00 0.00 4.49
4768 8574 3.552684 CCTTTAGTACCGGTTCAACACGA 60.553 47.826 15.04 0.00 0.00 4.35
4769 8575 3.724508 TTAGTACCGGTTCAACACGAA 57.275 42.857 15.04 3.84 0.00 3.85
4776 8582 3.412061 TTCAACACGAACCGGTGC 58.588 55.556 8.52 4.53 41.65 5.01
4777 8583 1.153329 TTCAACACGAACCGGTGCT 60.153 52.632 8.52 0.00 41.65 4.40
4778 8584 0.104487 TTCAACACGAACCGGTGCTA 59.896 50.000 8.52 0.00 41.65 3.49
4779 8585 0.104487 TCAACACGAACCGGTGCTAA 59.896 50.000 8.52 0.00 41.65 3.09
4780 8586 0.938713 CAACACGAACCGGTGCTAAA 59.061 50.000 8.52 0.00 41.65 1.85
4781 8587 1.070175 CAACACGAACCGGTGCTAAAG 60.070 52.381 8.52 0.00 41.65 1.85
4782 8588 0.601841 ACACGAACCGGTGCTAAAGG 60.602 55.000 8.52 0.00 41.65 3.11
4783 8589 1.004200 ACGAACCGGTGCTAAAGGG 60.004 57.895 8.52 0.00 0.00 3.95
4784 8590 2.396157 CGAACCGGTGCTAAAGGGC 61.396 63.158 8.52 0.00 0.00 5.19
4785 8591 1.302993 GAACCGGTGCTAAAGGGCA 60.303 57.895 8.52 0.00 40.15 5.36
4786 8592 0.891904 GAACCGGTGCTAAAGGGCAA 60.892 55.000 8.52 0.00 44.18 4.52
4787 8593 1.176619 AACCGGTGCTAAAGGGCAAC 61.177 55.000 8.52 0.00 45.46 4.17
4800 8606 4.012895 GCAACCACGTGGCACGAG 62.013 66.667 42.65 34.61 46.05 4.18
4801 8607 4.012895 CAACCACGTGGCACGAGC 62.013 66.667 42.65 4.67 46.05 5.03
4826 8632 2.941583 GGGGGCAGGGAGTCCTTT 60.942 66.667 9.58 0.00 43.45 3.11
4827 8633 1.618447 GGGGGCAGGGAGTCCTTTA 60.618 63.158 9.58 0.00 43.45 1.85
4828 8634 1.636769 GGGGGCAGGGAGTCCTTTAG 61.637 65.000 9.58 0.00 43.45 1.85
4829 8635 0.914902 GGGGCAGGGAGTCCTTTAGT 60.915 60.000 9.58 0.00 43.45 2.24
4830 8636 1.624391 GGGGCAGGGAGTCCTTTAGTA 60.624 57.143 9.58 0.00 43.45 1.82
4831 8637 1.485480 GGGCAGGGAGTCCTTTAGTAC 59.515 57.143 9.58 0.00 42.67 2.73
4832 8638 1.485480 GGCAGGGAGTCCTTTAGTACC 59.515 57.143 9.58 0.00 42.67 3.34
4833 8639 1.136500 GCAGGGAGTCCTTTAGTACCG 59.864 57.143 9.58 0.00 42.67 4.02
4834 8640 1.755380 CAGGGAGTCCTTTAGTACCGG 59.245 57.143 9.58 0.00 42.67 5.28
4835 8641 1.360507 AGGGAGTCCTTTAGTACCGGT 59.639 52.381 13.98 13.98 41.56 5.28
4836 8642 2.182827 GGGAGTCCTTTAGTACCGGTT 58.817 52.381 15.04 0.00 0.00 4.44
4837 8643 2.093816 GGGAGTCCTTTAGTACCGGTTG 60.094 54.545 15.04 0.00 0.00 3.77
4838 8644 2.093816 GGAGTCCTTTAGTACCGGTTGG 60.094 54.545 15.04 6.26 42.84 3.77
4856 8662 2.766345 GGTGTCACCAACCGGTATAA 57.234 50.000 17.59 0.00 46.94 0.98
4857 8663 3.056588 GGTGTCACCAACCGGTATAAA 57.943 47.619 17.59 0.00 46.94 1.40
4858 8664 3.410508 GGTGTCACCAACCGGTATAAAA 58.589 45.455 17.59 0.00 46.94 1.52
4859 8665 3.819902 GGTGTCACCAACCGGTATAAAAA 59.180 43.478 17.59 0.00 46.94 1.94
4860 8666 4.460034 GGTGTCACCAACCGGTATAAAAAT 59.540 41.667 17.59 0.00 46.94 1.82
4861 8667 5.395642 GTGTCACCAACCGGTATAAAAATG 58.604 41.667 8.00 0.00 46.94 2.32
4862 8668 5.048573 GTGTCACCAACCGGTATAAAAATGT 60.049 40.000 8.00 0.00 46.94 2.71
4863 8669 5.535406 TGTCACCAACCGGTATAAAAATGTT 59.465 36.000 8.00 0.00 46.94 2.71
4864 8670 5.859648 GTCACCAACCGGTATAAAAATGTTG 59.140 40.000 8.00 0.00 46.94 3.33
4866 8672 4.749976 CCAACCGGTATAAAAATGTTGGG 58.250 43.478 8.00 0.00 45.58 4.12
4867 8673 4.382147 CCAACCGGTATAAAAATGTTGGGG 60.382 45.833 8.00 0.00 45.58 4.96
4868 8674 3.367321 ACCGGTATAAAAATGTTGGGGG 58.633 45.455 4.49 0.00 0.00 5.40
4869 8675 3.245694 ACCGGTATAAAAATGTTGGGGGT 60.246 43.478 4.49 0.00 0.00 4.95
4870 8676 3.770388 CCGGTATAAAAATGTTGGGGGTT 59.230 43.478 0.00 0.00 0.00 4.11
4871 8677 4.223255 CCGGTATAAAAATGTTGGGGGTTT 59.777 41.667 0.00 0.00 0.00 3.27
4872 8678 5.280062 CCGGTATAAAAATGTTGGGGGTTTT 60.280 40.000 0.00 0.00 0.00 2.43
4873 8679 5.639931 CGGTATAAAAATGTTGGGGGTTTTG 59.360 40.000 0.00 0.00 0.00 2.44
4874 8680 5.941058 GGTATAAAAATGTTGGGGGTTTTGG 59.059 40.000 0.00 0.00 0.00 3.28
4875 8681 3.304911 AAAAATGTTGGGGGTTTTGGG 57.695 42.857 0.00 0.00 0.00 4.12
4876 8682 1.900254 AAATGTTGGGGGTTTTGGGT 58.100 45.000 0.00 0.00 0.00 4.51
4877 8683 1.900254 AATGTTGGGGGTTTTGGGTT 58.100 45.000 0.00 0.00 0.00 4.11
4878 8684 1.900254 ATGTTGGGGGTTTTGGGTTT 58.100 45.000 0.00 0.00 0.00 3.27
4879 8685 2.563039 TGTTGGGGGTTTTGGGTTTA 57.437 45.000 0.00 0.00 0.00 2.01
4880 8686 3.061909 TGTTGGGGGTTTTGGGTTTAT 57.938 42.857 0.00 0.00 0.00 1.40
4881 8687 2.706190 TGTTGGGGGTTTTGGGTTTATG 59.294 45.455 0.00 0.00 0.00 1.90
4882 8688 2.973406 GTTGGGGGTTTTGGGTTTATGA 59.027 45.455 0.00 0.00 0.00 2.15
4883 8689 3.569135 TGGGGGTTTTGGGTTTATGAT 57.431 42.857 0.00 0.00 0.00 2.45
4884 8690 3.875571 TGGGGGTTTTGGGTTTATGATT 58.124 40.909 0.00 0.00 0.00 2.57
4885 8691 4.243643 TGGGGGTTTTGGGTTTATGATTT 58.756 39.130 0.00 0.00 0.00 2.17
4886 8692 4.287326 TGGGGGTTTTGGGTTTATGATTTC 59.713 41.667 0.00 0.00 0.00 2.17
4887 8693 4.534500 GGGGGTTTTGGGTTTATGATTTCT 59.466 41.667 0.00 0.00 0.00 2.52
4888 8694 5.013704 GGGGGTTTTGGGTTTATGATTTCTT 59.986 40.000 0.00 0.00 0.00 2.52
4889 8695 6.466615 GGGGGTTTTGGGTTTATGATTTCTTT 60.467 38.462 0.00 0.00 0.00 2.52
4890 8696 7.001674 GGGGTTTTGGGTTTATGATTTCTTTT 58.998 34.615 0.00 0.00 0.00 2.27
4891 8697 7.504238 GGGGTTTTGGGTTTATGATTTCTTTTT 59.496 33.333 0.00 0.00 0.00 1.94
4892 8698 8.564574 GGGTTTTGGGTTTATGATTTCTTTTTC 58.435 33.333 0.00 0.00 0.00 2.29
4893 8699 9.114952 GGTTTTGGGTTTATGATTTCTTTTTCA 57.885 29.630 0.00 0.00 0.00 2.69
4932 8738 9.709600 TTTTCCATTTAATTCTTTTTCGTTTGC 57.290 25.926 0.00 0.00 0.00 3.68
4933 8739 8.655651 TTCCATTTAATTCTTTTTCGTTTGCT 57.344 26.923 0.00 0.00 0.00 3.91
4934 8740 8.071122 TCCATTTAATTCTTTTTCGTTTGCTG 57.929 30.769 0.00 0.00 0.00 4.41
4935 8741 7.170658 TCCATTTAATTCTTTTTCGTTTGCTGG 59.829 33.333 0.00 0.00 0.00 4.85
4936 8742 7.042119 CCATTTAATTCTTTTTCGTTTGCTGGT 60.042 33.333 0.00 0.00 0.00 4.00
4937 8743 8.973378 CATTTAATTCTTTTTCGTTTGCTGGTA 58.027 29.630 0.00 0.00 0.00 3.25
4938 8744 9.705290 ATTTAATTCTTTTTCGTTTGCTGGTAT 57.295 25.926 0.00 0.00 0.00 2.73
4939 8745 9.535878 TTTAATTCTTTTTCGTTTGCTGGTATT 57.464 25.926 0.00 0.00 0.00 1.89
4940 8746 9.535878 TTAATTCTTTTTCGTTTGCTGGTATTT 57.464 25.926 0.00 0.00 0.00 1.40
4941 8747 8.432110 AATTCTTTTTCGTTTGCTGGTATTTT 57.568 26.923 0.00 0.00 0.00 1.82
4942 8748 9.535878 AATTCTTTTTCGTTTGCTGGTATTTTA 57.464 25.926 0.00 0.00 0.00 1.52
4943 8749 7.917720 TCTTTTTCGTTTGCTGGTATTTTAC 57.082 32.000 0.00 0.00 0.00 2.01
4944 8750 6.633634 TCTTTTTCGTTTGCTGGTATTTTACG 59.366 34.615 0.00 0.00 0.00 3.18
4945 8751 5.670149 TTTCGTTTGCTGGTATTTTACGA 57.330 34.783 0.00 0.00 35.11 3.43
4946 8752 5.866335 TTCGTTTGCTGGTATTTTACGAT 57.134 34.783 0.00 0.00 36.58 3.73
4947 8753 6.964741 TTCGTTTGCTGGTATTTTACGATA 57.035 33.333 0.00 0.00 36.58 2.92
4948 8754 6.335176 TCGTTTGCTGGTATTTTACGATAC 57.665 37.500 0.00 0.00 32.39 2.24
4949 8755 6.101332 TCGTTTGCTGGTATTTTACGATACT 58.899 36.000 0.00 0.00 33.86 2.12
4950 8756 7.257003 TCGTTTGCTGGTATTTTACGATACTA 58.743 34.615 0.00 0.00 33.86 1.82
4951 8757 7.220683 TCGTTTGCTGGTATTTTACGATACTAC 59.779 37.037 0.00 0.00 33.86 2.73
4952 8758 7.009448 CGTTTGCTGGTATTTTACGATACTACA 59.991 37.037 0.00 0.00 33.86 2.74
4953 8759 8.823818 GTTTGCTGGTATTTTACGATACTACAT 58.176 33.333 0.00 0.00 33.86 2.29
4968 8774 9.603298 ACGATACTACATATTGTACACGTTATG 57.397 33.333 13.97 13.97 36.29 1.90
4969 8775 8.572976 CGATACTACATATTGTACACGTTATGC 58.427 37.037 14.90 0.00 0.00 3.14
4970 8776 9.401873 GATACTACATATTGTACACGTTATGCA 57.598 33.333 14.90 0.00 0.00 3.96
4971 8777 9.923143 ATACTACATATTGTACACGTTATGCAT 57.077 29.630 3.79 3.79 0.00 3.96
4973 8779 9.923143 ACTACATATTGTACACGTTATGCATAT 57.077 29.630 7.36 0.00 0.00 1.78
5004 8810 8.749026 AATAGAACTTCTAGTAGAACCGATCA 57.251 34.615 8.59 0.00 31.67 2.92
5005 8811 8.927675 ATAGAACTTCTAGTAGAACCGATCAT 57.072 34.615 8.59 0.00 31.67 2.45
5006 8812 7.648039 AGAACTTCTAGTAGAACCGATCATT 57.352 36.000 8.59 0.00 29.89 2.57
5007 8813 8.749026 AGAACTTCTAGTAGAACCGATCATTA 57.251 34.615 8.59 0.00 29.89 1.90
5008 8814 9.357161 AGAACTTCTAGTAGAACCGATCATTAT 57.643 33.333 8.59 0.00 29.89 1.28
5023 8829 9.856488 ACCGATCATTATATATACTCACACAAC 57.144 33.333 0.00 0.00 0.00 3.32
5024 8830 9.302345 CCGATCATTATATATACTCACACAACC 57.698 37.037 0.00 0.00 0.00 3.77
5025 8831 9.855021 CGATCATTATATATACTCACACAACCA 57.145 33.333 0.00 0.00 0.00 3.67
5027 8833 9.944376 ATCATTATATATACTCACACAACCACC 57.056 33.333 0.00 0.00 0.00 4.61
5028 8834 8.929487 TCATTATATATACTCACACAACCACCA 58.071 33.333 0.00 0.00 0.00 4.17
5029 8835 9.725019 CATTATATATACTCACACAACCACCAT 57.275 33.333 0.00 0.00 0.00 3.55
5036 8842 8.871629 ATACTCACACAACCACCATTAATTAA 57.128 30.769 0.00 0.00 0.00 1.40
5037 8843 7.775053 ACTCACACAACCACCATTAATTAAT 57.225 32.000 4.81 4.81 0.00 1.40
5038 8844 8.189119 ACTCACACAACCACCATTAATTAATT 57.811 30.769 8.01 5.89 0.00 1.40
5039 8845 8.303876 ACTCACACAACCACCATTAATTAATTC 58.696 33.333 8.01 0.00 0.00 2.17
5040 8846 8.183104 TCACACAACCACCATTAATTAATTCA 57.817 30.769 8.01 0.00 0.00 2.57
5041 8847 8.085296 TCACACAACCACCATTAATTAATTCAC 58.915 33.333 8.01 0.00 0.00 3.18
5042 8848 7.869937 CACACAACCACCATTAATTAATTCACA 59.130 33.333 8.01 0.00 0.00 3.58
5043 8849 7.870445 ACACAACCACCATTAATTAATTCACAC 59.130 33.333 8.01 0.00 0.00 3.82
5044 8850 7.869937 CACAACCACCATTAATTAATTCACACA 59.130 33.333 8.01 0.00 0.00 3.72
5045 8851 8.592809 ACAACCACCATTAATTAATTCACACAT 58.407 29.630 8.01 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 43 4.457834 TTCAAAATCACGTTGGGTTGTT 57.542 36.364 0.00 0.00 0.00 2.83
85 89 7.048629 TGTTTGATTGCCAACAAAATCTCTA 57.951 32.000 6.72 0.00 39.77 2.43
191 200 8.986477 AAAATAACAACCAATGAAGTAGCATC 57.014 30.769 0.00 0.00 0.00 3.91
244 264 3.815401 GCATGGGTGTACTTGGTATCATC 59.185 47.826 0.00 0.00 0.00 2.92
245 265 3.201930 TGCATGGGTGTACTTGGTATCAT 59.798 43.478 0.00 0.00 0.00 2.45
246 266 2.573915 TGCATGGGTGTACTTGGTATCA 59.426 45.455 0.00 0.00 0.00 2.15
247 267 2.943033 GTGCATGGGTGTACTTGGTATC 59.057 50.000 0.00 0.00 37.87 2.24
248 268 2.307392 TGTGCATGGGTGTACTTGGTAT 59.693 45.455 0.00 0.00 41.01 2.73
249 269 1.700186 TGTGCATGGGTGTACTTGGTA 59.300 47.619 0.00 0.00 41.01 3.25
250 270 0.476338 TGTGCATGGGTGTACTTGGT 59.524 50.000 0.00 0.00 41.01 3.67
251 271 0.881118 GTGTGCATGGGTGTACTTGG 59.119 55.000 0.00 0.00 41.01 3.61
252 272 1.603456 TGTGTGCATGGGTGTACTTG 58.397 50.000 0.00 0.00 41.01 3.16
253 273 1.953686 GTTGTGTGCATGGGTGTACTT 59.046 47.619 0.00 0.00 41.01 2.24
254 274 1.604604 GTTGTGTGCATGGGTGTACT 58.395 50.000 0.00 0.00 41.01 2.73
407 549 4.940046 TGCAGCACCTTTTGAAAAATCAAA 59.060 33.333 0.00 0.11 37.77 2.69
428 570 4.157656 TGGATATGGTTACAAACAGCTTGC 59.842 41.667 0.00 0.00 38.75 4.01
472 639 6.542005 ACATTTGCATGTCCGTTAGATGAATA 59.458 34.615 0.00 0.00 39.69 1.75
484 651 5.953183 TCATAAGTGAACATTTGCATGTCC 58.047 37.500 0.00 0.00 43.34 4.02
1091 1595 1.635487 CTTTCCCCATCTTCCCACAGA 59.365 52.381 0.00 0.00 0.00 3.41
1464 1970 3.181410 TGGGACGGAGGGAGTATATCAAT 60.181 47.826 0.00 0.00 0.00 2.57
2612 3740 3.738246 CAGTGGCTGCTGCTGCTG 61.738 66.667 26.79 16.73 40.48 4.41
3239 6881 8.153550 GTGAGTAATTATCATCAGGTTCCTCAT 58.846 37.037 0.00 0.00 0.00 2.90
3438 7102 9.693739 TGGCAGAAAAGGATTAGTTATTCATAA 57.306 29.630 0.00 0.00 0.00 1.90
3624 7305 7.818997 ACATACCTATCGAGAACATCTTGTA 57.181 36.000 0.00 0.00 0.00 2.41
4006 7741 2.821969 CCTGCACTTTAGCCAAGATGTT 59.178 45.455 0.26 0.00 36.21 2.71
4195 7967 5.925509 ACTCAAGTCTAACAGCAGGTTAAA 58.074 37.500 3.12 0.00 41.27 1.52
4243 8015 4.074970 GAGTTTTGAGGCTTGATGGAAGA 58.925 43.478 0.00 0.00 32.82 2.87
4297 8103 9.845214 AATACTCCCAAGGTAATGTAGATAGAT 57.155 33.333 0.00 0.00 0.00 1.98
4397 8203 2.921797 TAGGCAGTGCGCGTGTGTA 61.922 57.895 8.43 0.00 43.84 2.90
4420 8226 2.686816 GGTGAAACGGTGCATCGGG 61.687 63.158 25.34 0.00 38.12 5.14
4468 8274 2.158813 AGAGTGGCGAGGAAAACAAAGA 60.159 45.455 0.00 0.00 0.00 2.52
4482 8288 0.258774 AGGGAGAGAGAGAGAGTGGC 59.741 60.000 0.00 0.00 0.00 5.01
4487 8293 1.010793 AGAGGGAGGGAGAGAGAGAGA 59.989 57.143 0.00 0.00 0.00 3.10
4488 8294 1.421646 GAGAGGGAGGGAGAGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
4489 8295 1.010793 AGAGAGGGAGGGAGAGAGAGA 59.989 57.143 0.00 0.00 0.00 3.10
4490 8296 1.421646 GAGAGAGGGAGGGAGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
4491 8297 1.010793 AGAGAGAGGGAGGGAGAGAGA 59.989 57.143 0.00 0.00 0.00 3.10
4492 8298 1.421646 GAGAGAGAGGGAGGGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
4493 8299 1.010793 AGAGAGAGAGGGAGGGAGAGA 59.989 57.143 0.00 0.00 0.00 3.10
4494 8300 1.522900 AGAGAGAGAGGGAGGGAGAG 58.477 60.000 0.00 0.00 0.00 3.20
4495 8301 2.293924 TGTAGAGAGAGAGGGAGGGAGA 60.294 54.545 0.00 0.00 0.00 3.71
4496 8302 2.131854 TGTAGAGAGAGAGGGAGGGAG 58.868 57.143 0.00 0.00 0.00 4.30
4497 8303 2.288598 TGTAGAGAGAGAGGGAGGGA 57.711 55.000 0.00 0.00 0.00 4.20
4498 8304 3.611025 AATGTAGAGAGAGAGGGAGGG 57.389 52.381 0.00 0.00 0.00 4.30
4499 8305 4.105697 AGGTAATGTAGAGAGAGAGGGAGG 59.894 50.000 0.00 0.00 0.00 4.30
4500 8306 5.319043 AGGTAATGTAGAGAGAGAGGGAG 57.681 47.826 0.00 0.00 0.00 4.30
4501 8307 5.450453 CAAGGTAATGTAGAGAGAGAGGGA 58.550 45.833 0.00 0.00 0.00 4.20
4502 8308 4.586841 CCAAGGTAATGTAGAGAGAGAGGG 59.413 50.000 0.00 0.00 0.00 4.30
4503 8309 4.586841 CCCAAGGTAATGTAGAGAGAGAGG 59.413 50.000 0.00 0.00 0.00 3.69
4504 8310 5.450453 TCCCAAGGTAATGTAGAGAGAGAG 58.550 45.833 0.00 0.00 0.00 3.20
4505 8311 5.044030 ACTCCCAAGGTAATGTAGAGAGAGA 60.044 44.000 0.00 0.00 0.00 3.10
4506 8312 5.205056 ACTCCCAAGGTAATGTAGAGAGAG 58.795 45.833 0.00 0.00 0.00 3.20
4507 8313 5.208294 ACTCCCAAGGTAATGTAGAGAGA 57.792 43.478 0.00 0.00 0.00 3.10
4508 8314 7.604657 AATACTCCCAAGGTAATGTAGAGAG 57.395 40.000 0.00 0.00 0.00 3.20
4509 8315 8.287350 ACTAATACTCCCAAGGTAATGTAGAGA 58.713 37.037 0.00 0.00 0.00 3.10
4510 8316 8.480133 ACTAATACTCCCAAGGTAATGTAGAG 57.520 38.462 0.00 0.00 0.00 2.43
4517 8323 9.108111 CCCATAATACTAATACTCCCAAGGTAA 57.892 37.037 0.00 0.00 0.00 2.85
4518 8324 8.466797 TCCCATAATACTAATACTCCCAAGGTA 58.533 37.037 0.00 0.00 0.00 3.08
4519 8325 7.318401 TCCCATAATACTAATACTCCCAAGGT 58.682 38.462 0.00 0.00 0.00 3.50
4520 8326 7.808279 TCCCATAATACTAATACTCCCAAGG 57.192 40.000 0.00 0.00 0.00 3.61
4521 8327 9.726438 CTTTCCCATAATACTAATACTCCCAAG 57.274 37.037 0.00 0.00 0.00 3.61
4522 8328 8.665906 CCTTTCCCATAATACTAATACTCCCAA 58.334 37.037 0.00 0.00 0.00 4.12
4523 8329 8.020253 TCCTTTCCCATAATACTAATACTCCCA 58.980 37.037 0.00 0.00 0.00 4.37
4524 8330 8.445361 TCCTTTCCCATAATACTAATACTCCC 57.555 38.462 0.00 0.00 0.00 4.30
4525 8331 9.722184 GTTCCTTTCCCATAATACTAATACTCC 57.278 37.037 0.00 0.00 0.00 3.85
4530 8336 9.453830 AGAGAGTTCCTTTCCCATAATACTAAT 57.546 33.333 0.00 0.00 0.00 1.73
4531 8337 8.855804 AGAGAGTTCCTTTCCCATAATACTAA 57.144 34.615 0.00 0.00 0.00 2.24
4532 8338 8.290277 AGAGAGAGTTCCTTTCCCATAATACTA 58.710 37.037 0.00 0.00 0.00 1.82
4533 8339 7.136203 AGAGAGAGTTCCTTTCCCATAATACT 58.864 38.462 0.00 0.00 0.00 2.12
4534 8340 7.289084 AGAGAGAGAGTTCCTTTCCCATAATAC 59.711 40.741 0.00 0.00 0.00 1.89
4535 8341 7.366226 AGAGAGAGAGTTCCTTTCCCATAATA 58.634 38.462 0.00 0.00 0.00 0.98
4536 8342 6.209026 AGAGAGAGAGTTCCTTTCCCATAAT 58.791 40.000 0.00 0.00 0.00 1.28
4537 8343 5.594777 AGAGAGAGAGTTCCTTTCCCATAA 58.405 41.667 0.00 0.00 0.00 1.90
4538 8344 5.043732 AGAGAGAGAGAGTTCCTTTCCCATA 60.044 44.000 0.00 0.00 0.00 2.74
4539 8345 4.030216 GAGAGAGAGAGTTCCTTTCCCAT 58.970 47.826 0.00 0.00 0.00 4.00
4540 8346 3.076785 AGAGAGAGAGAGTTCCTTTCCCA 59.923 47.826 0.00 0.00 0.00 4.37
4541 8347 3.699538 GAGAGAGAGAGAGTTCCTTTCCC 59.300 52.174 0.00 0.00 0.00 3.97
4542 8348 4.600062 AGAGAGAGAGAGAGTTCCTTTCC 58.400 47.826 0.00 0.00 0.00 3.13
4543 8349 4.640647 GGAGAGAGAGAGAGAGTTCCTTTC 59.359 50.000 0.00 0.00 0.00 2.62
4544 8350 4.569865 GGGAGAGAGAGAGAGAGTTCCTTT 60.570 50.000 0.00 0.00 0.00 3.11
4545 8351 3.053619 GGGAGAGAGAGAGAGAGTTCCTT 60.054 52.174 0.00 0.00 0.00 3.36
4546 8352 2.509964 GGGAGAGAGAGAGAGAGTTCCT 59.490 54.545 0.00 0.00 0.00 3.36
4547 8353 2.509964 AGGGAGAGAGAGAGAGAGTTCC 59.490 54.545 0.00 0.00 0.00 3.62
4548 8354 3.933861 AGGGAGAGAGAGAGAGAGTTC 57.066 52.381 0.00 0.00 0.00 3.01
4549 8355 4.292306 AGAAAGGGAGAGAGAGAGAGAGTT 59.708 45.833 0.00 0.00 0.00 3.01
4550 8356 3.852578 AGAAAGGGAGAGAGAGAGAGAGT 59.147 47.826 0.00 0.00 0.00 3.24
4551 8357 4.455606 GAGAAAGGGAGAGAGAGAGAGAG 58.544 52.174 0.00 0.00 0.00 3.20
4552 8358 3.202151 GGAGAAAGGGAGAGAGAGAGAGA 59.798 52.174 0.00 0.00 0.00 3.10
4553 8359 3.555966 GGAGAAAGGGAGAGAGAGAGAG 58.444 54.545 0.00 0.00 0.00 3.20
4554 8360 2.243736 GGGAGAAAGGGAGAGAGAGAGA 59.756 54.545 0.00 0.00 0.00 3.10
4555 8361 2.244769 AGGGAGAAAGGGAGAGAGAGAG 59.755 54.545 0.00 0.00 0.00 3.20
4556 8362 2.243736 GAGGGAGAAAGGGAGAGAGAGA 59.756 54.545 0.00 0.00 0.00 3.10
4557 8363 2.244769 AGAGGGAGAAAGGGAGAGAGAG 59.755 54.545 0.00 0.00 0.00 3.20
4558 8364 2.243736 GAGAGGGAGAAAGGGAGAGAGA 59.756 54.545 0.00 0.00 0.00 3.10
4559 8365 2.244769 AGAGAGGGAGAAAGGGAGAGAG 59.755 54.545 0.00 0.00 0.00 3.20
4560 8366 2.243736 GAGAGAGGGAGAAAGGGAGAGA 59.756 54.545 0.00 0.00 0.00 3.10
4561 8367 2.244769 AGAGAGAGGGAGAAAGGGAGAG 59.755 54.545 0.00 0.00 0.00 3.20
4562 8368 2.243736 GAGAGAGAGGGAGAAAGGGAGA 59.756 54.545 0.00 0.00 0.00 3.71
4563 8369 2.244769 AGAGAGAGAGGGAGAAAGGGAG 59.755 54.545 0.00 0.00 0.00 4.30
4564 8370 2.293246 AGAGAGAGAGGGAGAAAGGGA 58.707 52.381 0.00 0.00 0.00 4.20
4565 8371 2.846665 AGAGAGAGAGGGAGAAAGGG 57.153 55.000 0.00 0.00 0.00 3.95
4566 8372 4.243793 TGTAGAGAGAGAGGGAGAAAGG 57.756 50.000 0.00 0.00 0.00 3.11
4567 8373 6.264518 GGTAATGTAGAGAGAGAGGGAGAAAG 59.735 46.154 0.00 0.00 0.00 2.62
4568 8374 6.068735 AGGTAATGTAGAGAGAGAGGGAGAAA 60.069 42.308 0.00 0.00 0.00 2.52
4569 8375 5.433712 AGGTAATGTAGAGAGAGAGGGAGAA 59.566 44.000 0.00 0.00 0.00 2.87
4570 8376 4.979039 AGGTAATGTAGAGAGAGAGGGAGA 59.021 45.833 0.00 0.00 0.00 3.71
4571 8377 5.319043 AGGTAATGTAGAGAGAGAGGGAG 57.681 47.826 0.00 0.00 0.00 4.30
4572 8378 5.450453 CAAGGTAATGTAGAGAGAGAGGGA 58.550 45.833 0.00 0.00 0.00 4.20
4573 8379 4.586841 CCAAGGTAATGTAGAGAGAGAGGG 59.413 50.000 0.00 0.00 0.00 4.30
4574 8380 4.586841 CCCAAGGTAATGTAGAGAGAGAGG 59.413 50.000 0.00 0.00 0.00 3.69
4575 8381 5.450453 TCCCAAGGTAATGTAGAGAGAGAG 58.550 45.833 0.00 0.00 0.00 3.20
4576 8382 5.044030 ACTCCCAAGGTAATGTAGAGAGAGA 60.044 44.000 0.00 0.00 0.00 3.10
4577 8383 5.205056 ACTCCCAAGGTAATGTAGAGAGAG 58.795 45.833 0.00 0.00 0.00 3.20
4578 8384 5.208294 ACTCCCAAGGTAATGTAGAGAGA 57.792 43.478 0.00 0.00 0.00 3.10
4579 8385 7.604657 AATACTCCCAAGGTAATGTAGAGAG 57.395 40.000 0.00 0.00 0.00 3.20
4580 8386 7.989947 AAATACTCCCAAGGTAATGTAGAGA 57.010 36.000 0.00 0.00 0.00 3.10
4605 8411 5.122519 TGTGTCTGTACTGATGCTCAAAAA 58.877 37.500 5.69 0.00 0.00 1.94
4606 8412 4.702831 TGTGTCTGTACTGATGCTCAAAA 58.297 39.130 5.69 0.00 0.00 2.44
4607 8413 4.335400 TGTGTCTGTACTGATGCTCAAA 57.665 40.909 5.69 0.00 0.00 2.69
4608 8414 4.309933 CTTGTGTCTGTACTGATGCTCAA 58.690 43.478 5.69 6.69 0.00 3.02
4609 8415 3.862264 GCTTGTGTCTGTACTGATGCTCA 60.862 47.826 5.69 0.00 0.00 4.26
4610 8416 2.670414 GCTTGTGTCTGTACTGATGCTC 59.330 50.000 5.69 0.00 0.00 4.26
4611 8417 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
4612 8418 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
4613 8419 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
4614 8420 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
4615 8421 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
4616 8422 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
4617 8423 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
4618 8424 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
4619 8425 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
4620 8426 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
4621 8427 3.243877 GTGTATATGAGCGCTTGTGTCTG 59.756 47.826 13.26 0.00 0.00 3.51
4622 8428 3.448686 GTGTATATGAGCGCTTGTGTCT 58.551 45.455 13.26 0.00 0.00 3.41
4623 8429 2.216488 CGTGTATATGAGCGCTTGTGTC 59.784 50.000 13.26 0.00 0.00 3.67
4624 8430 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
4625 8431 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
4626 8432 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
4631 8437 3.119628 GTGTATGTGCGTGTATATGAGCG 59.880 47.826 0.00 0.00 0.00 5.03
4632 8438 4.048504 TGTGTATGTGCGTGTATATGAGC 58.951 43.478 0.00 0.00 0.00 4.26
4633 8439 5.281727 AGTGTGTATGTGCGTGTATATGAG 58.718 41.667 0.00 0.00 0.00 2.90
4634 8440 5.257082 AGTGTGTATGTGCGTGTATATGA 57.743 39.130 0.00 0.00 0.00 2.15
4635 8441 6.142320 CACTAGTGTGTATGTGCGTGTATATG 59.858 42.308 15.06 0.00 39.24 1.78
4636 8442 6.206498 CACTAGTGTGTATGTGCGTGTATAT 58.794 40.000 15.06 0.00 39.24 0.86
4637 8443 5.575019 CACTAGTGTGTATGTGCGTGTATA 58.425 41.667 15.06 0.00 39.24 1.47
4638 8444 4.421058 CACTAGTGTGTATGTGCGTGTAT 58.579 43.478 15.06 0.00 39.24 2.29
4639 8445 3.828786 CACTAGTGTGTATGTGCGTGTA 58.171 45.455 15.06 0.00 39.24 2.90
4640 8446 2.672714 CACTAGTGTGTATGTGCGTGT 58.327 47.619 15.06 0.00 39.24 4.49
4641 8447 1.390123 GCACTAGTGTGTATGTGCGTG 59.610 52.381 23.44 0.00 44.60 5.34
4642 8448 1.710013 GCACTAGTGTGTATGTGCGT 58.290 50.000 23.44 0.00 44.60 5.24
4645 8451 3.679980 GGTTCTGCACTAGTGTGTATGTG 59.320 47.826 23.44 7.03 45.44 3.21
4646 8452 3.614150 CGGTTCTGCACTAGTGTGTATGT 60.614 47.826 23.44 0.00 45.44 2.29
4647 8453 2.923655 CGGTTCTGCACTAGTGTGTATG 59.076 50.000 23.44 9.83 45.44 2.39
4648 8454 2.094182 CCGGTTCTGCACTAGTGTGTAT 60.094 50.000 23.44 0.00 45.44 2.29
4649 8455 1.271379 CCGGTTCTGCACTAGTGTGTA 59.729 52.381 23.44 10.04 45.44 2.90
4650 8456 0.033504 CCGGTTCTGCACTAGTGTGT 59.966 55.000 23.44 0.00 45.44 3.72
4651 8457 0.670546 CCCGGTTCTGCACTAGTGTG 60.671 60.000 23.44 16.29 46.37 3.82
4652 8458 1.671742 CCCGGTTCTGCACTAGTGT 59.328 57.895 23.44 0.00 0.00 3.55
4653 8459 1.741770 GCCCGGTTCTGCACTAGTG 60.742 63.158 18.93 18.93 0.00 2.74
4654 8460 1.764571 TTGCCCGGTTCTGCACTAGT 61.765 55.000 0.00 0.00 37.18 2.57
4655 8461 0.392998 ATTGCCCGGTTCTGCACTAG 60.393 55.000 0.00 0.00 37.18 2.57
4656 8462 0.906066 TATTGCCCGGTTCTGCACTA 59.094 50.000 0.00 0.00 37.18 2.74
4657 8463 0.392998 CTATTGCCCGGTTCTGCACT 60.393 55.000 0.00 0.00 37.18 4.40
4658 8464 1.993369 GCTATTGCCCGGTTCTGCAC 61.993 60.000 0.00 0.00 37.18 4.57
4659 8465 1.748879 GCTATTGCCCGGTTCTGCA 60.749 57.895 0.00 0.00 35.27 4.41
4660 8466 1.748879 TGCTATTGCCCGGTTCTGC 60.749 57.895 0.00 0.00 38.71 4.26
4661 8467 1.376609 GGTGCTATTGCCCGGTTCTG 61.377 60.000 0.00 0.00 38.71 3.02
4662 8468 1.077716 GGTGCTATTGCCCGGTTCT 60.078 57.895 0.00 0.00 38.71 3.01
4663 8469 2.469516 CGGTGCTATTGCCCGGTTC 61.470 63.158 16.86 0.00 43.94 3.62
4664 8470 2.437716 CGGTGCTATTGCCCGGTT 60.438 61.111 16.86 0.00 43.94 4.44
4667 8473 2.437716 AACCGGTGCTATTGCCCG 60.438 61.111 8.52 17.41 45.75 6.13
4668 8474 2.469516 CGAACCGGTGCTATTGCCC 61.470 63.158 8.52 0.00 38.71 5.36
4669 8475 0.460635 TACGAACCGGTGCTATTGCC 60.461 55.000 8.52 0.00 38.71 4.52
4670 8476 1.326548 CTTACGAACCGGTGCTATTGC 59.673 52.381 8.52 0.00 40.20 3.56
4671 8477 1.931172 CCTTACGAACCGGTGCTATTG 59.069 52.381 8.52 0.00 0.00 1.90
4672 8478 1.741394 GCCTTACGAACCGGTGCTATT 60.741 52.381 8.52 0.00 0.00 1.73
4673 8479 0.179092 GCCTTACGAACCGGTGCTAT 60.179 55.000 8.52 0.00 0.00 2.97
4674 8480 1.216178 GCCTTACGAACCGGTGCTA 59.784 57.895 8.52 0.00 0.00 3.49
4675 8481 2.047560 GCCTTACGAACCGGTGCT 60.048 61.111 8.52 0.00 0.00 4.40
4676 8482 3.122971 GGCCTTACGAACCGGTGC 61.123 66.667 8.52 4.53 0.00 5.01
4677 8483 2.435410 GGGCCTTACGAACCGGTG 60.435 66.667 8.52 0.00 0.00 4.94
4678 8484 1.771783 AAAGGGCCTTACGAACCGGT 61.772 55.000 21.25 0.00 0.00 5.28
4679 8485 0.249955 TAAAGGGCCTTACGAACCGG 59.750 55.000 21.25 0.00 0.00 5.28
4680 8486 1.066645 ACTAAAGGGCCTTACGAACCG 60.067 52.381 21.25 5.60 0.00 4.44
4681 8487 2.353323 CACTAAAGGGCCTTACGAACC 58.647 52.381 21.25 0.00 0.00 3.62
4682 8488 1.736126 GCACTAAAGGGCCTTACGAAC 59.264 52.381 21.25 5.99 0.00 3.95
4683 8489 1.339342 GGCACTAAAGGGCCTTACGAA 60.339 52.381 21.25 4.81 46.74 3.85
4684 8490 0.251073 GGCACTAAAGGGCCTTACGA 59.749 55.000 21.25 7.25 46.74 3.43
4685 8491 2.776659 GGCACTAAAGGGCCTTACG 58.223 57.895 21.25 15.66 46.74 3.18
4690 8496 1.605451 AAACCGGCACTAAAGGGCC 60.605 57.895 13.51 13.51 46.80 5.80
4691 8497 1.584495 CAAACCGGCACTAAAGGGC 59.416 57.895 0.00 0.00 0.00 5.19
4692 8498 0.538746 ACCAAACCGGCACTAAAGGG 60.539 55.000 0.00 0.00 39.03 3.95
4693 8499 2.188062 TACCAAACCGGCACTAAAGG 57.812 50.000 0.00 0.00 39.03 3.11
4694 8500 2.227149 GGTTACCAAACCGGCACTAAAG 59.773 50.000 0.00 0.00 45.61 1.85
4695 8501 2.228925 GGTTACCAAACCGGCACTAAA 58.771 47.619 0.00 0.00 45.61 1.85
4696 8502 1.894881 GGTTACCAAACCGGCACTAA 58.105 50.000 0.00 0.00 45.61 2.24
4697 8503 3.629548 GGTTACCAAACCGGCACTA 57.370 52.632 0.00 0.00 45.61 2.74
4698 8504 4.486887 GGTTACCAAACCGGCACT 57.513 55.556 0.00 0.00 45.61 4.40
4705 8511 3.876242 TTTTAGCGTCGGTTACCAAAC 57.124 42.857 0.65 0.00 34.66 2.93
4706 8512 6.479660 CCTATATTTTAGCGTCGGTTACCAAA 59.520 38.462 0.65 0.00 0.00 3.28
4707 8513 5.984926 CCTATATTTTAGCGTCGGTTACCAA 59.015 40.000 0.65 0.00 0.00 3.67
4708 8514 5.531634 CCTATATTTTAGCGTCGGTTACCA 58.468 41.667 0.65 0.00 0.00 3.25
4709 8515 4.386954 GCCTATATTTTAGCGTCGGTTACC 59.613 45.833 0.65 0.00 0.00 2.85
4710 8516 4.984161 TGCCTATATTTTAGCGTCGGTTAC 59.016 41.667 0.65 0.00 0.00 2.50
4711 8517 4.984161 GTGCCTATATTTTAGCGTCGGTTA 59.016 41.667 0.65 0.00 0.00 2.85
4712 8518 3.805971 GTGCCTATATTTTAGCGTCGGTT 59.194 43.478 0.65 0.00 0.00 4.44
4713 8519 3.069158 AGTGCCTATATTTTAGCGTCGGT 59.931 43.478 1.19 1.19 0.00 4.69
4714 8520 3.650139 AGTGCCTATATTTTAGCGTCGG 58.350 45.455 0.00 0.00 0.00 4.79
4715 8521 6.128902 CCTTTAGTGCCTATATTTTAGCGTCG 60.129 42.308 0.00 0.00 0.00 5.12
4716 8522 6.347483 GCCTTTAGTGCCTATATTTTAGCGTC 60.347 42.308 0.00 0.00 0.00 5.19
4717 8523 5.469084 GCCTTTAGTGCCTATATTTTAGCGT 59.531 40.000 0.00 0.00 0.00 5.07
4718 8524 5.106673 GGCCTTTAGTGCCTATATTTTAGCG 60.107 44.000 0.00 0.00 45.70 4.26
4719 8525 6.255596 GGCCTTTAGTGCCTATATTTTAGC 57.744 41.667 0.00 0.00 45.70 3.09
4743 8549 1.278537 TGAACCGGTACTAAAGGGGG 58.721 55.000 8.00 0.00 0.00 5.40
4744 8550 2.038820 TGTTGAACCGGTACTAAAGGGG 59.961 50.000 8.00 0.00 0.00 4.79
4745 8551 3.069289 GTGTTGAACCGGTACTAAAGGG 58.931 50.000 8.00 0.00 0.00 3.95
4746 8552 2.733026 CGTGTTGAACCGGTACTAAAGG 59.267 50.000 8.00 0.00 0.00 3.11
4747 8553 3.641648 TCGTGTTGAACCGGTACTAAAG 58.358 45.455 8.00 0.00 0.00 1.85
4748 8554 3.724508 TCGTGTTGAACCGGTACTAAA 57.275 42.857 8.00 0.00 0.00 1.85
4749 8555 3.724508 TTCGTGTTGAACCGGTACTAA 57.275 42.857 8.00 0.00 0.00 2.24
4759 8565 0.104487 TAGCACCGGTTCGTGTTGAA 59.896 50.000 2.97 0.00 36.08 2.69
4760 8566 0.104487 TTAGCACCGGTTCGTGTTGA 59.896 50.000 2.97 0.00 36.08 3.18
4761 8567 0.938713 TTTAGCACCGGTTCGTGTTG 59.061 50.000 2.97 0.00 36.08 3.33
4762 8568 1.223187 CTTTAGCACCGGTTCGTGTT 58.777 50.000 2.97 0.00 36.08 3.32
4763 8569 0.601841 CCTTTAGCACCGGTTCGTGT 60.602 55.000 2.97 0.00 36.08 4.49
4764 8570 1.296056 CCCTTTAGCACCGGTTCGTG 61.296 60.000 2.97 0.00 36.80 4.35
4765 8571 1.004200 CCCTTTAGCACCGGTTCGT 60.004 57.895 2.97 0.00 0.00 3.85
4766 8572 2.396157 GCCCTTTAGCACCGGTTCG 61.396 63.158 2.97 0.00 0.00 3.95
4767 8573 0.891904 TTGCCCTTTAGCACCGGTTC 60.892 55.000 2.97 0.00 43.97 3.62
4768 8574 1.151908 TTGCCCTTTAGCACCGGTT 59.848 52.632 2.97 0.00 43.97 4.44
4769 8575 1.602605 GTTGCCCTTTAGCACCGGT 60.603 57.895 0.00 0.00 43.97 5.28
4770 8576 2.340328 GGTTGCCCTTTAGCACCGG 61.340 63.158 0.00 0.00 43.97 5.28
4771 8577 1.602323 TGGTTGCCCTTTAGCACCG 60.602 57.895 0.00 0.00 43.97 4.94
4772 8578 1.862602 CGTGGTTGCCCTTTAGCACC 61.863 60.000 0.00 0.00 43.97 5.01
4773 8579 1.170290 ACGTGGTTGCCCTTTAGCAC 61.170 55.000 0.00 0.00 43.97 4.40
4774 8580 1.149627 ACGTGGTTGCCCTTTAGCA 59.850 52.632 0.00 0.00 42.17 3.49
4775 8581 1.579429 CACGTGGTTGCCCTTTAGC 59.421 57.895 7.95 0.00 0.00 3.09
4776 8582 1.862602 GCCACGTGGTTGCCCTTTAG 61.863 60.000 33.92 6.07 37.57 1.85
4777 8583 1.899534 GCCACGTGGTTGCCCTTTA 60.900 57.895 33.92 0.00 37.57 1.85
4778 8584 3.223589 GCCACGTGGTTGCCCTTT 61.224 61.111 33.92 0.00 37.57 3.11
4779 8585 4.514585 TGCCACGTGGTTGCCCTT 62.515 61.111 33.92 0.00 37.57 3.95
4783 8589 4.012895 CTCGTGCCACGTGGTTGC 62.013 66.667 33.92 20.95 43.14 4.17
4784 8590 4.012895 GCTCGTGCCACGTGGTTG 62.013 66.667 33.92 23.28 43.14 3.77
4809 8615 1.618447 TAAAGGACTCCCTGCCCCC 60.618 63.158 0.00 0.00 43.48 5.40
4810 8616 0.914902 ACTAAAGGACTCCCTGCCCC 60.915 60.000 0.00 0.00 43.48 5.80
4811 8617 1.485480 GTACTAAAGGACTCCCTGCCC 59.515 57.143 0.00 0.00 43.48 5.36
4812 8618 1.485480 GGTACTAAAGGACTCCCTGCC 59.515 57.143 0.00 0.00 43.48 4.85
4813 8619 1.136500 CGGTACTAAAGGACTCCCTGC 59.864 57.143 0.00 0.00 43.48 4.85
4814 8620 1.755380 CCGGTACTAAAGGACTCCCTG 59.245 57.143 0.00 0.00 43.48 4.45
4816 8622 1.857965 ACCGGTACTAAAGGACTCCC 58.142 55.000 4.49 0.00 0.00 4.30
4817 8623 2.093816 CCAACCGGTACTAAAGGACTCC 60.094 54.545 8.00 0.00 0.00 3.85
4818 8624 2.564504 ACCAACCGGTACTAAAGGACTC 59.435 50.000 8.00 0.00 46.71 3.36
4819 8625 2.301009 CACCAACCGGTACTAAAGGACT 59.699 50.000 8.00 0.00 46.94 3.85
4820 8626 2.037641 ACACCAACCGGTACTAAAGGAC 59.962 50.000 8.00 0.00 46.94 3.85
4821 8627 2.299867 GACACCAACCGGTACTAAAGGA 59.700 50.000 8.00 0.00 46.94 3.36
4822 8628 2.037511 TGACACCAACCGGTACTAAAGG 59.962 50.000 8.00 6.03 46.94 3.11
4823 8629 3.062042 GTGACACCAACCGGTACTAAAG 58.938 50.000 8.00 0.00 46.94 1.85
4824 8630 2.224257 GGTGACACCAACCGGTACTAAA 60.224 50.000 20.14 0.00 46.94 1.85
4825 8631 1.344114 GGTGACACCAACCGGTACTAA 59.656 52.381 20.14 0.00 46.94 2.24
4826 8632 0.968405 GGTGACACCAACCGGTACTA 59.032 55.000 20.14 0.00 46.94 1.82
4827 8633 1.750297 GGTGACACCAACCGGTACT 59.250 57.895 20.14 0.00 46.94 2.73
4828 8634 4.366603 GGTGACACCAACCGGTAC 57.633 61.111 20.14 0.00 46.94 3.34
4845 8651 4.382147 CCCCCAACATTTTTATACCGGTTG 60.382 45.833 15.04 5.32 36.34 3.77
4846 8652 3.770388 CCCCCAACATTTTTATACCGGTT 59.230 43.478 15.04 3.05 0.00 4.44
4847 8653 3.245694 ACCCCCAACATTTTTATACCGGT 60.246 43.478 13.98 13.98 0.00 5.28
4848 8654 3.367321 ACCCCCAACATTTTTATACCGG 58.633 45.455 0.00 0.00 0.00 5.28
4849 8655 5.408880 AAACCCCCAACATTTTTATACCG 57.591 39.130 0.00 0.00 0.00 4.02
4850 8656 5.941058 CCAAAACCCCCAACATTTTTATACC 59.059 40.000 0.00 0.00 0.00 2.73
4851 8657 5.941058 CCCAAAACCCCCAACATTTTTATAC 59.059 40.000 0.00 0.00 0.00 1.47
4852 8658 5.611408 ACCCAAAACCCCCAACATTTTTATA 59.389 36.000 0.00 0.00 0.00 0.98
4853 8659 4.417183 ACCCAAAACCCCCAACATTTTTAT 59.583 37.500 0.00 0.00 0.00 1.40
4854 8660 3.786450 ACCCAAAACCCCCAACATTTTTA 59.214 39.130 0.00 0.00 0.00 1.52
4855 8661 2.583101 ACCCAAAACCCCCAACATTTTT 59.417 40.909 0.00 0.00 0.00 1.94
4856 8662 2.209758 ACCCAAAACCCCCAACATTTT 58.790 42.857 0.00 0.00 0.00 1.82
4857 8663 1.900254 ACCCAAAACCCCCAACATTT 58.100 45.000 0.00 0.00 0.00 2.32
4858 8664 1.900254 AACCCAAAACCCCCAACATT 58.100 45.000 0.00 0.00 0.00 2.71
4859 8665 1.900254 AAACCCAAAACCCCCAACAT 58.100 45.000 0.00 0.00 0.00 2.71
4860 8666 2.563039 TAAACCCAAAACCCCCAACA 57.437 45.000 0.00 0.00 0.00 3.33
4861 8667 2.973406 TCATAAACCCAAAACCCCCAAC 59.027 45.455 0.00 0.00 0.00 3.77
4862 8668 3.346146 TCATAAACCCAAAACCCCCAA 57.654 42.857 0.00 0.00 0.00 4.12
4863 8669 3.569135 ATCATAAACCCAAAACCCCCA 57.431 42.857 0.00 0.00 0.00 4.96
4864 8670 4.534500 AGAAATCATAAACCCAAAACCCCC 59.466 41.667 0.00 0.00 0.00 5.40
4865 8671 5.755409 AGAAATCATAAACCCAAAACCCC 57.245 39.130 0.00 0.00 0.00 4.95
4866 8672 8.458573 AAAAAGAAATCATAAACCCAAAACCC 57.541 30.769 0.00 0.00 0.00 4.11
4867 8673 9.114952 TGAAAAAGAAATCATAAACCCAAAACC 57.885 29.630 0.00 0.00 0.00 3.27
4906 8712 9.709600 GCAAACGAAAAAGAATTAAATGGAAAA 57.290 25.926 0.00 0.00 0.00 2.29
4907 8713 9.103861 AGCAAACGAAAAAGAATTAAATGGAAA 57.896 25.926 0.00 0.00 0.00 3.13
4908 8714 8.547069 CAGCAAACGAAAAAGAATTAAATGGAA 58.453 29.630 0.00 0.00 0.00 3.53
4909 8715 7.170658 CCAGCAAACGAAAAAGAATTAAATGGA 59.829 33.333 0.00 0.00 0.00 3.41
4910 8716 7.042119 ACCAGCAAACGAAAAAGAATTAAATGG 60.042 33.333 0.00 0.00 0.00 3.16
4911 8717 7.850501 ACCAGCAAACGAAAAAGAATTAAATG 58.149 30.769 0.00 0.00 0.00 2.32
4912 8718 9.705290 ATACCAGCAAACGAAAAAGAATTAAAT 57.295 25.926 0.00 0.00 0.00 1.40
4913 8719 9.535878 AATACCAGCAAACGAAAAAGAATTAAA 57.464 25.926 0.00 0.00 0.00 1.52
4914 8720 9.535878 AAATACCAGCAAACGAAAAAGAATTAA 57.464 25.926 0.00 0.00 0.00 1.40
4915 8721 9.535878 AAAATACCAGCAAACGAAAAAGAATTA 57.464 25.926 0.00 0.00 0.00 1.40
4916 8722 8.432110 AAAATACCAGCAAACGAAAAAGAATT 57.568 26.923 0.00 0.00 0.00 2.17
4917 8723 8.974408 GTAAAATACCAGCAAACGAAAAAGAAT 58.026 29.630 0.00 0.00 0.00 2.40
4918 8724 7.166142 CGTAAAATACCAGCAAACGAAAAAGAA 59.834 33.333 0.00 0.00 0.00 2.52
4919 8725 6.633634 CGTAAAATACCAGCAAACGAAAAAGA 59.366 34.615 0.00 0.00 0.00 2.52
4920 8726 6.633634 TCGTAAAATACCAGCAAACGAAAAAG 59.366 34.615 0.00 0.00 35.23 2.27
4921 8727 6.493116 TCGTAAAATACCAGCAAACGAAAAA 58.507 32.000 0.00 0.00 35.23 1.94
4922 8728 6.057627 TCGTAAAATACCAGCAAACGAAAA 57.942 33.333 0.00 0.00 35.23 2.29
4923 8729 5.670149 TCGTAAAATACCAGCAAACGAAA 57.330 34.783 0.00 0.00 35.23 3.46
4924 8730 5.866335 ATCGTAAAATACCAGCAAACGAA 57.134 34.783 0.00 0.00 40.71 3.85
4925 8731 6.101332 AGTATCGTAAAATACCAGCAAACGA 58.899 36.000 0.00 0.00 41.45 3.85
4926 8732 6.340537 AGTATCGTAAAATACCAGCAAACG 57.659 37.500 0.00 0.00 33.42 3.60
4927 8733 8.188531 TGTAGTATCGTAAAATACCAGCAAAC 57.811 34.615 0.00 0.00 33.42 2.93
4928 8734 8.951787 ATGTAGTATCGTAAAATACCAGCAAA 57.048 30.769 0.00 0.00 33.42 3.68
4942 8748 9.603298 CATAACGTGTACAATATGTAGTATCGT 57.397 33.333 0.00 0.00 32.84 3.73
4943 8749 8.572976 GCATAACGTGTACAATATGTAGTATCG 58.427 37.037 18.41 8.67 32.84 2.92
4944 8750 9.401873 TGCATAACGTGTACAATATGTAGTATC 57.598 33.333 18.41 7.77 32.84 2.24
4945 8751 9.923143 ATGCATAACGTGTACAATATGTAGTAT 57.077 29.630 18.41 10.25 32.84 2.12
4947 8753 9.923143 ATATGCATAACGTGTACAATATGTAGT 57.077 29.630 11.13 9.74 32.84 2.73
4978 8784 9.186837 TGATCGGTTCTACTAGAAGTTCTATTT 57.813 33.333 12.98 6.28 34.42 1.40
4979 8785 8.749026 TGATCGGTTCTACTAGAAGTTCTATT 57.251 34.615 12.98 10.18 34.42 1.73
4980 8786 8.927675 ATGATCGGTTCTACTAGAAGTTCTAT 57.072 34.615 12.98 6.58 34.42 1.98
4981 8787 8.749026 AATGATCGGTTCTACTAGAAGTTCTA 57.251 34.615 12.05 12.05 34.42 2.10
4982 8788 7.648039 AATGATCGGTTCTACTAGAAGTTCT 57.352 36.000 10.87 10.87 34.42 3.01
4997 8803 9.856488 GTTGTGTGAGTATATATAATGATCGGT 57.144 33.333 0.00 0.00 0.00 4.69
4998 8804 9.302345 GGTTGTGTGAGTATATATAATGATCGG 57.698 37.037 0.00 0.00 0.00 4.18
4999 8805 9.855021 TGGTTGTGTGAGTATATATAATGATCG 57.145 33.333 0.00 0.00 0.00 3.69
5001 8807 9.944376 GGTGGTTGTGTGAGTATATATAATGAT 57.056 33.333 0.00 0.00 0.00 2.45
5002 8808 8.929487 TGGTGGTTGTGTGAGTATATATAATGA 58.071 33.333 0.00 0.00 0.00 2.57
5003 8809 9.725019 ATGGTGGTTGTGTGAGTATATATAATG 57.275 33.333 0.00 0.00 0.00 1.90
5010 8816 9.961264 TTAATTAATGGTGGTTGTGTGAGTATA 57.039 29.630 0.00 0.00 0.00 1.47
5011 8817 8.871629 TTAATTAATGGTGGTTGTGTGAGTAT 57.128 30.769 0.00 0.00 0.00 2.12
5012 8818 8.871629 ATTAATTAATGGTGGTTGTGTGAGTA 57.128 30.769 9.93 0.00 0.00 2.59
5013 8819 7.775053 ATTAATTAATGGTGGTTGTGTGAGT 57.225 32.000 9.93 0.00 0.00 3.41
5014 8820 8.303156 TGAATTAATTAATGGTGGTTGTGTGAG 58.697 33.333 11.42 0.00 0.00 3.51
5015 8821 8.085296 GTGAATTAATTAATGGTGGTTGTGTGA 58.915 33.333 11.42 0.00 0.00 3.58
5016 8822 7.869937 TGTGAATTAATTAATGGTGGTTGTGTG 59.130 33.333 11.42 0.00 0.00 3.82
5017 8823 7.870445 GTGTGAATTAATTAATGGTGGTTGTGT 59.130 33.333 11.42 0.00 0.00 3.72
5018 8824 7.869937 TGTGTGAATTAATTAATGGTGGTTGTG 59.130 33.333 11.42 0.00 0.00 3.33
5019 8825 7.957002 TGTGTGAATTAATTAATGGTGGTTGT 58.043 30.769 11.42 0.00 0.00 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.