Multiple sequence alignment - TraesCS3A01G131700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G131700 chr3A 100.000 4040 0 0 1 4040 108372718 108376757 0.000000e+00 7461.0
1 TraesCS3A01G131700 chr3A 83.019 265 28 11 3254 3503 513924310 513924048 1.460000e-54 224.0
2 TraesCS3A01G131700 chr3A 99.020 102 1 0 3 104 727293674 727293775 2.480000e-42 183.0
3 TraesCS3A01G131700 chr3A 79.279 222 27 8 3253 3457 691846631 691846412 1.960000e-28 137.0
4 TraesCS3A01G131700 chr3B 88.081 3012 202 78 267 3240 163657905 163660797 0.000000e+00 3428.0
5 TraesCS3A01G131700 chr3B 93.492 461 24 5 3576 4031 163660886 163661345 0.000000e+00 680.0
6 TraesCS3A01G131700 chr3B 83.333 264 29 11 3254 3503 513807625 513807363 3.140000e-56 230.0
7 TraesCS3A01G131700 chr3B 83.122 237 19 10 3249 3466 4310587 4310821 3.190000e-46 196.0
8 TraesCS3A01G131700 chr3D 90.623 1845 92 31 267 2081 112691175 112692968 0.000000e+00 2374.0
9 TraesCS3A01G131700 chr3D 86.270 976 80 34 2290 3240 112693180 112694126 0.000000e+00 1011.0
10 TraesCS3A01G131700 chr3D 93.926 461 22 5 3576 4031 112694217 112694676 0.000000e+00 691.0
11 TraesCS3A01G131700 chr3D 83.019 265 29 12 3254 3503 394187487 394187224 4.060000e-55 226.0
12 TraesCS3A01G131700 chr3D 78.947 266 38 11 3256 3504 557460311 557460047 8.980000e-37 165.0
13 TraesCS3A01G131700 chr1D 86.996 223 22 6 3250 3466 463548543 463548764 1.120000e-60 244.0
14 TraesCS3A01G131700 chr5A 85.135 222 24 6 3253 3466 423872972 423872752 6.800000e-53 219.0
15 TraesCS3A01G131700 chr5A 95.614 114 3 2 3 115 388137614 388137726 8.920000e-42 182.0
16 TraesCS3A01G131700 chr2A 83.710 221 26 9 3248 3466 744778560 744778772 2.460000e-47 200.0
17 TraesCS3A01G131700 chr6A 82.553 235 21 12 3250 3466 4957561 4957793 5.330000e-44 189.0
18 TraesCS3A01G131700 chr6A 98.077 104 2 0 3 106 562065522 562065419 8.920000e-42 182.0
19 TraesCS3A01G131700 chr6A 82.609 92 12 4 3351 3438 578940460 578940551 1.200000e-10 78.7
20 TraesCS3A01G131700 chr1B 80.634 284 20 15 3253 3502 664074837 664074555 1.920000e-43 187.0
21 TraesCS3A01G131700 chr1B 95.455 110 4 1 3 112 300571109 300571001 1.490000e-39 174.0
22 TraesCS3A01G131700 chr7B 99.029 103 1 0 3 105 588373412 588373514 6.900000e-43 185.0
23 TraesCS3A01G131700 chr7B 98.095 105 2 0 3 107 603479501 603479605 2.480000e-42 183.0
24 TraesCS3A01G131700 chr2D 84.184 196 22 7 3253 3442 471637976 471638168 8.920000e-42 182.0
25 TraesCS3A01G131700 chr2D 82.143 168 18 6 1915 2071 129947608 129947774 2.530000e-27 134.0
26 TraesCS3A01G131700 chr5B 98.058 103 2 0 3 105 43853844 43853742 3.210000e-41 180.0
27 TraesCS3A01G131700 chr5B 75.785 223 27 14 3253 3458 429823748 429823536 2.000000e-13 87.9
28 TraesCS3A01G131700 chr4B 96.364 110 3 1 3 111 37402690 37402799 3.210000e-41 180.0
29 TraesCS3A01G131700 chr7A 94.068 118 4 3 3 117 729419440 729419557 4.150000e-40 176.0
30 TraesCS3A01G131700 chr7A 78.899 218 27 7 3249 3458 705143557 705143351 3.280000e-26 130.0
31 TraesCS3A01G131700 chr6D 84.916 179 17 8 3284 3455 450678896 450678721 5.370000e-39 172.0
32 TraesCS3A01G131700 chr6D 77.376 221 41 6 3254 3466 432820960 432821179 5.480000e-24 122.0
33 TraesCS3A01G131700 chr1A 82.738 168 15 7 1915 2071 497218122 497218286 1.960000e-28 137.0
34 TraesCS3A01G131700 chr5D 82.143 168 18 6 1915 2071 361591334 361591500 2.530000e-27 134.0
35 TraesCS3A01G131700 chr5D 75.000 224 24 13 3254 3458 542373348 542373558 1.560000e-09 75.0
36 TraesCS3A01G131700 chr4A 82.143 84 12 2 3386 3466 626956266 626956183 7.250000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G131700 chr3A 108372718 108376757 4039 False 7461.000000 7461 100.0000 1 4040 1 chr3A.!!$F1 4039
1 TraesCS3A01G131700 chr3B 163657905 163661345 3440 False 2054.000000 3428 90.7865 267 4031 2 chr3B.!!$F2 3764
2 TraesCS3A01G131700 chr3D 112691175 112694676 3501 False 1358.666667 2374 90.2730 267 4031 3 chr3D.!!$F1 3764

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
762 784 0.172803 CGTTAGCGCTAGTCCCTTGT 59.827 55.0 17.98 0.0 0.00 3.16 F
2040 2087 0.107848 CCTCGTATTCCGGGCAAGTT 60.108 55.0 0.00 0.0 34.98 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2297 2399 0.036952 ACCGCACAGATGAAGGTGAG 60.037 55.0 0.0 0.0 37.11 3.51 R
3790 3976 0.178932 ACCTGCTGTACCCTCTGACA 60.179 55.0 0.0 0.0 0.00 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 8.885693 ATGCATTAGAGAGGTAGTATCATACA 57.114 34.615 0.00 0.00 0.00 2.29
49 50 8.112016 TGCATTAGAGAGGTAGTATCATACAC 57.888 38.462 0.00 0.00 0.00 2.90
50 51 7.945109 TGCATTAGAGAGGTAGTATCATACACT 59.055 37.037 0.00 0.00 0.00 3.55
51 52 9.451002 GCATTAGAGAGGTAGTATCATACACTA 57.549 37.037 0.00 0.00 0.00 2.74
86 87 9.355916 TGCATGATACTAGTATATGATACTCCC 57.644 37.037 22.89 9.00 0.00 4.30
87 88 8.798402 GCATGATACTAGTATATGATACTCCCC 58.202 40.741 22.89 8.64 0.00 4.81
88 89 9.868160 CATGATACTAGTATATGATACTCCCCA 57.132 37.037 15.42 5.35 0.00 4.96
96 97 8.147244 AGTATATGATACTCCCCATTACAACC 57.853 38.462 0.00 0.00 0.00 3.77
97 98 7.737607 AGTATATGATACTCCCCATTACAACCA 59.262 37.037 0.00 0.00 0.00 3.67
98 99 4.771114 TGATACTCCCCATTACAACCAG 57.229 45.455 0.00 0.00 0.00 4.00
99 100 3.118038 TGATACTCCCCATTACAACCAGC 60.118 47.826 0.00 0.00 0.00 4.85
100 101 0.331616 ACTCCCCATTACAACCAGCC 59.668 55.000 0.00 0.00 0.00 4.85
101 102 0.625849 CTCCCCATTACAACCAGCCT 59.374 55.000 0.00 0.00 0.00 4.58
102 103 1.005924 CTCCCCATTACAACCAGCCTT 59.994 52.381 0.00 0.00 0.00 4.35
103 104 2.241176 CTCCCCATTACAACCAGCCTTA 59.759 50.000 0.00 0.00 0.00 2.69
104 105 2.856231 TCCCCATTACAACCAGCCTTAT 59.144 45.455 0.00 0.00 0.00 1.73
105 106 4.048600 TCCCCATTACAACCAGCCTTATA 58.951 43.478 0.00 0.00 0.00 0.98
106 107 4.667858 TCCCCATTACAACCAGCCTTATAT 59.332 41.667 0.00 0.00 0.00 0.86
107 108 5.010282 CCCCATTACAACCAGCCTTATATC 58.990 45.833 0.00 0.00 0.00 1.63
108 109 5.222130 CCCCATTACAACCAGCCTTATATCT 60.222 44.000 0.00 0.00 0.00 1.98
109 110 6.012858 CCCCATTACAACCAGCCTTATATCTA 60.013 42.308 0.00 0.00 0.00 1.98
110 111 7.458397 CCCATTACAACCAGCCTTATATCTAA 58.542 38.462 0.00 0.00 0.00 2.10
111 112 8.109634 CCCATTACAACCAGCCTTATATCTAAT 58.890 37.037 0.00 0.00 0.00 1.73
118 119 9.737427 CAACCAGCCTTATATCTAATATAGACG 57.263 37.037 0.00 0.00 37.69 4.18
119 120 9.476928 AACCAGCCTTATATCTAATATAGACGT 57.523 33.333 0.00 0.00 37.69 4.34
120 121 9.122779 ACCAGCCTTATATCTAATATAGACGTC 57.877 37.037 7.70 7.70 37.69 4.34
121 122 8.283992 CCAGCCTTATATCTAATATAGACGTCG 58.716 40.741 10.46 0.00 37.69 5.12
122 123 8.283992 CAGCCTTATATCTAATATAGACGTCGG 58.716 40.741 10.46 0.17 37.69 4.79
123 124 7.992033 AGCCTTATATCTAATATAGACGTCGGT 59.008 37.037 10.46 5.42 37.69 4.69
124 125 8.068977 GCCTTATATCTAATATAGACGTCGGTG 58.931 40.741 10.46 0.00 37.69 4.94
125 126 9.107177 CCTTATATCTAATATAGACGTCGGTGT 57.893 37.037 10.46 0.00 37.69 4.16
130 131 8.789825 ATCTAATATAGACGTCGGTGTTATCT 57.210 34.615 10.46 0.00 37.69 1.98
131 132 9.881649 ATCTAATATAGACGTCGGTGTTATCTA 57.118 33.333 10.46 0.00 37.69 1.98
132 133 9.881649 TCTAATATAGACGTCGGTGTTATCTAT 57.118 33.333 10.46 1.84 36.71 1.98
139 140 8.557592 AGACGTCGGTGTTATCTATATAATCA 57.442 34.615 10.46 0.00 30.42 2.57
140 141 9.006839 AGACGTCGGTGTTATCTATATAATCAA 57.993 33.333 10.46 0.00 30.42 2.57
141 142 9.784680 GACGTCGGTGTTATCTATATAATCAAT 57.215 33.333 0.00 0.00 30.42 2.57
173 174 9.851686 ACATATACCAACATACAATTGATGTCT 57.148 29.630 13.59 6.27 42.70 3.41
197 198 9.588774 TCTTATTTAATACGATTAATTGCACGC 57.411 29.630 2.34 0.00 0.00 5.34
198 199 9.594038 CTTATTTAATACGATTAATTGCACGCT 57.406 29.630 2.34 0.00 0.00 5.07
201 202 9.938670 ATTTAATACGATTAATTGCACGCTAAA 57.061 25.926 2.34 1.88 0.00 1.85
202 203 8.756376 TTAATACGATTAATTGCACGCTAAAC 57.244 30.769 2.34 0.00 0.00 2.01
203 204 4.671880 ACGATTAATTGCACGCTAAACA 57.328 36.364 2.34 0.00 0.00 2.83
204 205 5.229921 ACGATTAATTGCACGCTAAACAT 57.770 34.783 2.34 0.00 0.00 2.71
205 206 6.352682 ACGATTAATTGCACGCTAAACATA 57.647 33.333 2.34 0.00 0.00 2.29
206 207 6.189567 ACGATTAATTGCACGCTAAACATAC 58.810 36.000 2.34 0.00 0.00 2.39
207 208 5.619607 CGATTAATTGCACGCTAAACATACC 59.380 40.000 0.00 0.00 0.00 2.73
208 209 3.398954 AATTGCACGCTAAACATACCG 57.601 42.857 0.00 0.00 0.00 4.02
209 210 1.080298 TTGCACGCTAAACATACCGG 58.920 50.000 0.00 0.00 0.00 5.28
210 211 0.741574 TGCACGCTAAACATACCGGG 60.742 55.000 6.32 0.00 0.00 5.73
211 212 2.011453 CACGCTAAACATACCGGGC 58.989 57.895 6.32 0.00 0.00 6.13
212 213 1.519898 ACGCTAAACATACCGGGCG 60.520 57.895 14.53 14.53 46.47 6.13
213 214 2.877974 CGCTAAACATACCGGGCGC 61.878 63.158 6.32 0.00 36.46 6.53
214 215 2.877974 GCTAAACATACCGGGCGCG 61.878 63.158 17.31 17.31 0.00 6.86
215 216 2.202905 TAAACATACCGGGCGCGG 60.203 61.111 37.34 37.34 0.00 6.46
216 217 2.632136 CTAAACATACCGGGCGCGGA 62.632 60.000 43.94 28.49 0.00 5.54
217 218 2.030490 TAAACATACCGGGCGCGGAT 62.030 55.000 43.94 29.29 0.00 4.18
218 219 2.030490 AAACATACCGGGCGCGGATA 62.030 55.000 43.94 30.82 0.00 2.59
219 220 2.030490 AACATACCGGGCGCGGATAA 62.030 55.000 43.94 28.88 0.00 1.75
220 221 1.301087 CATACCGGGCGCGGATAAA 60.301 57.895 43.94 26.57 0.00 1.40
221 222 1.301165 ATACCGGGCGCGGATAAAC 60.301 57.895 43.94 0.00 0.00 2.01
222 223 2.030490 ATACCGGGCGCGGATAAACA 62.030 55.000 43.94 22.40 0.00 2.83
223 224 2.904470 TACCGGGCGCGGATAAACAC 62.904 60.000 43.94 0.00 0.00 3.32
224 225 2.816083 CGGGCGCGGATAAACACA 60.816 61.111 16.41 0.00 0.00 3.72
225 226 2.789249 GGGCGCGGATAAACACAC 59.211 61.111 8.83 0.00 0.00 3.82
226 227 1.743995 GGGCGCGGATAAACACACT 60.744 57.895 8.83 0.00 0.00 3.55
227 228 1.423845 GGCGCGGATAAACACACTG 59.576 57.895 8.83 0.00 0.00 3.66
228 229 1.226018 GCGCGGATAAACACACTGC 60.226 57.895 8.83 0.00 0.00 4.40
230 231 1.226018 GCGGATAAACACACTGCGC 60.226 57.895 0.00 0.00 42.22 6.09
231 232 1.423845 CGGATAAACACACTGCGCC 59.576 57.895 4.18 0.00 0.00 6.53
232 233 1.800681 GGATAAACACACTGCGCCC 59.199 57.895 4.18 0.00 0.00 6.13
233 234 0.958382 GGATAAACACACTGCGCCCA 60.958 55.000 4.18 0.00 0.00 5.36
234 235 0.447801 GATAAACACACTGCGCCCAG 59.552 55.000 4.18 0.00 44.80 4.45
235 236 1.586154 ATAAACACACTGCGCCCAGC 61.586 55.000 4.18 0.00 43.02 4.85
262 263 3.648339 AAAAGAGTTGCATGCGATTGT 57.352 38.095 11.68 1.99 0.00 2.71
263 264 3.648339 AAAGAGTTGCATGCGATTGTT 57.352 38.095 11.68 9.04 0.00 2.83
264 265 2.624316 AGAGTTGCATGCGATTGTTG 57.376 45.000 11.68 0.00 0.00 3.33
265 266 1.881973 AGAGTTGCATGCGATTGTTGT 59.118 42.857 11.68 0.00 0.00 3.32
271 272 1.202110 GCATGCGATTGTTGTGGAGAG 60.202 52.381 0.00 0.00 0.00 3.20
317 322 0.600255 CTGACGAAAACTGAGCCCGT 60.600 55.000 0.00 0.00 36.08 5.28
331 336 2.537560 CCCGTTGATCTCGCATGCC 61.538 63.158 13.15 0.00 0.00 4.40
381 386 2.620112 CCAGCGGTTGTTGCTCCTG 61.620 63.158 0.00 0.00 41.72 3.86
392 397 1.264749 TTGCTCCTGGTATCGTGGCT 61.265 55.000 0.00 0.00 0.00 4.75
394 399 1.395826 GCTCCTGGTATCGTGGCTCT 61.396 60.000 0.00 0.00 0.00 4.09
416 421 1.544825 TTCTCCTGCAACCTCGGAGG 61.545 60.000 22.40 22.40 45.44 4.30
419 424 1.984570 CCTGCAACCTCGGAGGAGA 60.985 63.158 30.13 9.52 46.96 3.71
510 529 7.379098 AGGAAAAAGAAACAAGATACGATCC 57.621 36.000 0.00 0.00 0.00 3.36
511 530 6.374613 AGGAAAAAGAAACAAGATACGATCCC 59.625 38.462 0.00 0.00 0.00 3.85
512 531 5.796350 AAAAGAAACAAGATACGATCCCG 57.204 39.130 0.00 0.00 42.50 5.14
513 532 3.454371 AGAAACAAGATACGATCCCGG 57.546 47.619 0.00 0.00 40.78 5.73
524 543 1.820010 CGATCCCGGCCATCATCTCA 61.820 60.000 2.24 0.00 0.00 3.27
546 565 3.062889 TCTCATCTCATCTCCCTCCTCT 58.937 50.000 0.00 0.00 0.00 3.69
547 566 3.074390 TCTCATCTCATCTCCCTCCTCTC 59.926 52.174 0.00 0.00 0.00 3.20
548 567 2.109834 TCATCTCATCTCCCTCCTCTCC 59.890 54.545 0.00 0.00 0.00 3.71
635 654 1.803519 CTCGCTCGCACACTCTTCC 60.804 63.158 0.00 0.00 0.00 3.46
719 738 1.592669 CTTGATCCGGTAGGCTGCG 60.593 63.158 0.00 0.00 37.47 5.18
761 783 2.959275 CGTTAGCGCTAGTCCCTTG 58.041 57.895 17.98 0.17 0.00 3.61
762 784 0.172803 CGTTAGCGCTAGTCCCTTGT 59.827 55.000 17.98 0.00 0.00 3.16
763 785 1.798079 CGTTAGCGCTAGTCCCTTGTC 60.798 57.143 17.98 0.96 0.00 3.18
764 786 0.822164 TTAGCGCTAGTCCCTTGTCC 59.178 55.000 17.98 0.00 0.00 4.02
765 787 1.041447 TAGCGCTAGTCCCTTGTCCC 61.041 60.000 14.45 0.00 0.00 4.46
766 788 2.901042 CGCTAGTCCCTTGTCCCC 59.099 66.667 0.00 0.00 0.00 4.81
767 789 1.686110 CGCTAGTCCCTTGTCCCCT 60.686 63.158 0.00 0.00 0.00 4.79
768 790 1.908483 GCTAGTCCCTTGTCCCCTG 59.092 63.158 0.00 0.00 0.00 4.45
771 793 2.119847 TAGTCCCTTGTCCCCTGCCT 62.120 60.000 0.00 0.00 0.00 4.75
774 796 2.612115 CCTTGTCCCCTGCCTCCT 60.612 66.667 0.00 0.00 0.00 3.69
775 797 2.674220 CCTTGTCCCCTGCCTCCTC 61.674 68.421 0.00 0.00 0.00 3.71
830 852 2.123077 CGGCCTCATCTCCCCTCT 60.123 66.667 0.00 0.00 0.00 3.69
835 857 2.123251 TCATCTCCCCTCTCCGGC 60.123 66.667 0.00 0.00 0.00 6.13
836 858 3.237741 CATCTCCCCTCTCCGGCC 61.238 72.222 0.00 0.00 0.00 6.13
837 859 4.924187 ATCTCCCCTCTCCGGCCG 62.924 72.222 21.04 21.04 0.00 6.13
858 880 4.090057 GTTCCGTTGCGCCTCTGC 62.090 66.667 4.18 0.00 0.00 4.26
926 948 1.988293 TACATTTGGTGGTGTGGTGG 58.012 50.000 0.00 0.00 0.00 4.61
1028 1050 4.099170 GCCGAGCAACAGCAGCAG 62.099 66.667 0.00 0.00 0.00 4.24
1203 1231 1.737029 CGCATCGAGGAGCAGAAGAAA 60.737 52.381 0.00 0.00 0.00 2.52
1209 1237 2.355108 CGAGGAGCAGAAGAAAATGGGA 60.355 50.000 0.00 0.00 0.00 4.37
1215 1243 2.373224 CAGAAGAAAATGGGAGGAGGC 58.627 52.381 0.00 0.00 0.00 4.70
1276 1304 2.368192 CCCTATGCCACCTCCCCA 60.368 66.667 0.00 0.00 0.00 4.96
1296 1324 3.882326 CCCGCCCTGCTCCATCAT 61.882 66.667 0.00 0.00 0.00 2.45
1416 1447 1.065854 CACCCCTACAAGAGAAGCCTG 60.066 57.143 0.00 0.00 0.00 4.85
1425 1456 4.711949 AGAAGCCTGTGCCCGCAG 62.712 66.667 1.94 1.94 38.69 5.18
1447 1478 2.104967 CTCCACTCCCAATGGTACGTA 58.895 52.381 0.00 0.00 38.47 3.57
1482 1513 4.767255 CCGCAGCCTCCACTCCAC 62.767 72.222 0.00 0.00 0.00 4.02
1488 1519 2.258591 CCTCCACTCCACGTCACG 59.741 66.667 0.00 0.00 0.00 4.35
1506 1537 1.885388 GGCACGGCGTATGCATGTA 60.885 57.895 21.55 0.00 45.27 2.29
1511 1542 2.408368 CACGGCGTATGCATGTACTATG 59.592 50.000 14.22 0.00 45.35 2.23
1533 1570 3.635331 CACGAACGAGGTCTCAAACTTA 58.365 45.455 0.14 0.00 0.00 2.24
1599 1637 4.308458 CCGTCGAGCCACCCAACA 62.308 66.667 0.00 0.00 0.00 3.33
1628 1666 4.202202 CCCTTCAAACCAAATGTACAGCAA 60.202 41.667 0.33 0.00 0.00 3.91
1690 1737 6.257630 GGAAGACGAGAGGGTACGTATATATC 59.742 46.154 0.00 0.00 42.74 1.63
1713 1760 4.812476 CGCCGCTCCCGTGATGAA 62.812 66.667 0.00 0.00 0.00 2.57
1714 1761 3.195698 GCCGCTCCCGTGATGAAC 61.196 66.667 0.00 0.00 0.00 3.18
1715 1762 2.579201 CCGCTCCCGTGATGAACT 59.421 61.111 0.00 0.00 0.00 3.01
1754 1801 3.251004 GGATGGTCGCTAAATGTGGATTC 59.749 47.826 0.00 0.00 0.00 2.52
1908 1955 2.397413 ATTCCGGGATGGCCGATGTC 62.397 60.000 0.00 0.00 37.80 3.06
1981 2028 1.508632 TGCAGTTTTAGCTCACCGTC 58.491 50.000 0.00 0.00 0.00 4.79
1989 2036 3.746045 TTAGCTCACCGTCTCAGTTTT 57.254 42.857 0.00 0.00 0.00 2.43
2040 2087 0.107848 CCTCGTATTCCGGGCAAGTT 60.108 55.000 0.00 0.00 34.98 2.66
2041 2088 1.006832 CTCGTATTCCGGGCAAGTTG 58.993 55.000 0.00 0.00 37.11 3.16
2087 2137 8.827177 CAGAATGGTAGTAACTGTTCTTGTAA 57.173 34.615 0.00 0.00 31.46 2.41
2097 2147 8.648693 AGTAACTGTTCTTGTAACTTGTATCCT 58.351 33.333 0.00 0.00 0.00 3.24
2122 2222 5.456763 GCAGTTACTCCTATCCATCCCAATT 60.457 44.000 0.00 0.00 0.00 2.32
2123 2223 6.239887 GCAGTTACTCCTATCCATCCCAATTA 60.240 42.308 0.00 0.00 0.00 1.40
2124 2224 7.162082 CAGTTACTCCTATCCATCCCAATTAC 58.838 42.308 0.00 0.00 0.00 1.89
2133 2233 7.782644 CCTATCCATCCCAATTACCACTAAAAA 59.217 37.037 0.00 0.00 0.00 1.94
2149 2249 6.747280 CCACTAAAAATTACAGCTTCATTCCG 59.253 38.462 0.00 0.00 0.00 4.30
2150 2250 7.305474 CACTAAAAATTACAGCTTCATTCCGT 58.695 34.615 0.00 0.00 0.00 4.69
2187 2287 8.181573 CCTGATAAAAAGCTAAGAAACGCATAA 58.818 33.333 0.00 0.00 0.00 1.90
2189 2289 8.508062 TGATAAAAAGCTAAGAAACGCATAACA 58.492 29.630 0.00 0.00 0.00 2.41
2191 2291 7.566858 AAAAAGCTAAGAAACGCATAACATG 57.433 32.000 0.00 0.00 0.00 3.21
2244 2345 9.556030 GAAGAAAGTATTAGTACATTTTGGCAC 57.444 33.333 0.00 0.00 33.09 5.01
2265 2367 5.757808 GCACAATTTGTTTTGATACCAACCT 59.242 36.000 0.00 0.00 30.88 3.50
2266 2368 6.926272 GCACAATTTGTTTTGATACCAACCTA 59.074 34.615 0.00 0.00 30.88 3.08
2283 2385 6.672657 ACCAACCTAGTGTTCTTGGAGTATAT 59.327 38.462 2.32 0.00 38.52 0.86
2284 2386 7.842743 ACCAACCTAGTGTTCTTGGAGTATATA 59.157 37.037 2.32 0.00 38.52 0.86
2285 2387 8.361139 CCAACCTAGTGTTCTTGGAGTATATAG 58.639 40.741 3.11 0.00 38.52 1.31
2287 2389 8.694581 ACCTAGTGTTCTTGGAGTATATAGTC 57.305 38.462 8.83 8.83 38.52 2.59
2290 2392 9.344772 CTAGTGTTCTTGGAGTATATAGTCTGT 57.655 37.037 15.60 0.00 0.00 3.41
2297 2399 9.871238 TCTTGGAGTATATAGTCTGTTTGTTTC 57.129 33.333 15.60 0.00 0.00 2.78
2314 2416 2.084610 TTCTCACCTTCATCTGTGCG 57.915 50.000 0.00 0.00 32.51 5.34
2357 2459 2.421388 CCCAAGTTGTTCAGACTGGACA 60.421 50.000 12.84 12.84 0.00 4.02
2361 2463 1.940613 GTTGTTCAGACTGGACACCAC 59.059 52.381 16.51 9.35 0.00 4.16
2362 2464 0.468226 TGTTCAGACTGGACACCACC 59.532 55.000 12.84 0.00 0.00 4.61
2363 2465 0.600255 GTTCAGACTGGACACCACCG 60.600 60.000 9.16 0.00 0.00 4.94
2385 2487 1.375396 TTCGGTCACGGCAAGGATG 60.375 57.895 0.00 0.00 41.39 3.51
2405 2507 4.874977 GGCCGTAGCAGAGACGCC 62.875 72.222 0.00 0.00 42.56 5.68
2446 2548 1.685224 GGCCTCCACACCTCATGAA 59.315 57.895 0.00 0.00 0.00 2.57
2487 2589 0.908910 AATGCACATCCCGGAGTACA 59.091 50.000 0.73 0.00 0.00 2.90
2507 2615 3.782244 GACTTCAGTGCCAGCGCG 61.782 66.667 0.00 0.00 38.08 6.86
2556 2665 4.640771 TGCTCTTCTGAACCCTGTAAAT 57.359 40.909 0.00 0.00 0.00 1.40
2567 2676 4.634012 ACCCTGTAAATTGTGTGAGCTA 57.366 40.909 0.00 0.00 0.00 3.32
2569 2678 4.286032 ACCCTGTAAATTGTGTGAGCTAGA 59.714 41.667 0.00 0.00 0.00 2.43
2571 2680 5.882557 CCCTGTAAATTGTGTGAGCTAGATT 59.117 40.000 0.00 0.00 0.00 2.40
2577 2686 6.734104 AATTGTGTGAGCTAGATTTGACTC 57.266 37.500 0.00 0.00 0.00 3.36
2578 2687 4.193826 TGTGTGAGCTAGATTTGACTCC 57.806 45.455 0.00 0.00 0.00 3.85
2590 2699 7.066766 GCTAGATTTGACTCCAACTGATGAAAT 59.933 37.037 0.00 0.00 30.88 2.17
2595 2704 6.808008 TGACTCCAACTGATGAAATCTTTC 57.192 37.500 0.00 0.00 45.81 2.62
2605 2714 6.316640 ACTGATGAAATCTTTCTGATCAGCTG 59.683 38.462 18.36 7.63 43.90 4.24
2626 2735 4.750460 AGCGTTTCAGCTTCGTCA 57.250 50.000 0.00 0.00 46.80 4.35
2740 2849 1.373570 GGGAAATCGACTTGGAGCTG 58.626 55.000 0.00 0.00 0.00 4.24
2759 2868 2.106166 CTGAAGCTATGGAAGGGCTGAT 59.894 50.000 0.00 0.00 36.37 2.90
2779 2888 7.827819 CTGATCAAATCTGCAATGAACATTT 57.172 32.000 0.00 0.00 0.00 2.32
2784 2893 7.541162 TCAAATCTGCAATGAACATTTAGGAG 58.459 34.615 0.00 0.00 0.00 3.69
2796 2905 5.319043 ACATTTAGGAGGTTGTGGAGAAA 57.681 39.130 0.00 0.00 0.00 2.52
2798 2907 3.418684 TTAGGAGGTTGTGGAGAAAGC 57.581 47.619 0.00 0.00 0.00 3.51
2801 2910 2.979678 AGGAGGTTGTGGAGAAAGCTAA 59.020 45.455 0.00 0.00 35.59 3.09
2836 2946 9.155975 GATGTGTTCAAGTAGTAACATCAGATT 57.844 33.333 8.34 0.00 42.11 2.40
2837 2947 8.310406 TGTGTTCAAGTAGTAACATCAGATTG 57.690 34.615 0.00 0.00 37.87 2.67
2838 2948 7.931407 TGTGTTCAAGTAGTAACATCAGATTGT 59.069 33.333 0.00 0.00 37.87 2.71
2839 2949 9.419297 GTGTTCAAGTAGTAACATCAGATTGTA 57.581 33.333 0.00 0.00 37.87 2.41
2848 2958 7.978982 AGTAACATCAGATTGTATCAAACAGC 58.021 34.615 0.00 0.00 39.87 4.40
2851 2961 4.952262 TCAGATTGTATCAAACAGCTGC 57.048 40.909 15.27 0.00 39.91 5.25
2859 2969 4.937620 TGTATCAAACAGCTGCTTTCTAGG 59.062 41.667 15.27 0.00 33.01 3.02
2862 2972 3.324846 TCAAACAGCTGCTTTCTAGGAGA 59.675 43.478 15.27 3.86 42.01 3.71
2863 2973 4.019860 TCAAACAGCTGCTTTCTAGGAGAT 60.020 41.667 15.27 0.00 42.01 2.75
2874 2988 5.703130 GCTTTCTAGGAGATGTTTTCACTGT 59.297 40.000 0.00 0.00 0.00 3.55
2881 2995 7.678947 AGGAGATGTTTTCACTGTCAATAAG 57.321 36.000 0.00 0.00 0.00 1.73
2882 2996 7.227156 AGGAGATGTTTTCACTGTCAATAAGT 58.773 34.615 0.00 0.00 0.00 2.24
2893 3007 5.406780 CACTGTCAATAAGTCTTCTGGTGAC 59.593 44.000 9.36 9.36 33.73 3.67
2900 3014 4.974645 AAGTCTTCTGGTGACATGGTTA 57.025 40.909 0.00 0.00 41.51 2.85
2902 3016 5.505181 AGTCTTCTGGTGACATGGTTAAT 57.495 39.130 0.00 0.00 41.51 1.40
2905 3019 7.458397 AGTCTTCTGGTGACATGGTTAATTTA 58.542 34.615 0.00 0.00 41.51 1.40
2906 3020 7.390718 AGTCTTCTGGTGACATGGTTAATTTAC 59.609 37.037 0.00 0.00 41.51 2.01
2909 3023 7.260387 TCTGGTGACATGGTTAATTTACCTA 57.740 36.000 14.37 2.31 41.51 3.08
2910 3024 7.335627 TCTGGTGACATGGTTAATTTACCTAG 58.664 38.462 14.37 9.18 41.51 3.02
2911 3025 5.883673 TGGTGACATGGTTAATTTACCTAGC 59.116 40.000 14.37 6.47 35.53 3.42
2912 3026 5.883673 GGTGACATGGTTAATTTACCTAGCA 59.116 40.000 14.37 5.37 39.04 3.49
2913 3027 6.376018 GGTGACATGGTTAATTTACCTAGCAA 59.624 38.462 14.37 0.00 39.04 3.91
2914 3028 7.248437 GTGACATGGTTAATTTACCTAGCAAC 58.752 38.462 14.37 4.82 39.04 4.17
2915 3029 7.120726 GTGACATGGTTAATTTACCTAGCAACT 59.879 37.037 14.37 0.00 39.04 3.16
2916 3030 8.322828 TGACATGGTTAATTTACCTAGCAACTA 58.677 33.333 14.37 0.00 39.04 2.24
2917 3031 8.732746 ACATGGTTAATTTACCTAGCAACTAG 57.267 34.615 14.37 0.00 39.04 2.57
2918 3032 8.326529 ACATGGTTAATTTACCTAGCAACTAGT 58.673 33.333 14.37 0.00 39.04 2.57
2919 3033 9.826574 CATGGTTAATTTACCTAGCAACTAGTA 57.173 33.333 14.37 0.00 39.04 1.82
2921 3035 9.039165 TGGTTAATTTACCTAGCAACTAGTAGT 57.961 33.333 14.37 0.00 39.04 2.73
2953 3080 2.355717 ACGAAGTGAAGTAGAGCAGC 57.644 50.000 0.00 0.00 42.51 5.25
2954 3081 1.613925 ACGAAGTGAAGTAGAGCAGCA 59.386 47.619 0.00 0.00 42.51 4.41
2955 3082 2.257894 CGAAGTGAAGTAGAGCAGCAG 58.742 52.381 0.00 0.00 0.00 4.24
2975 3102 0.328926 TGTGCATGATGGAAGCAGGA 59.671 50.000 0.00 0.00 35.09 3.86
2997 3124 4.862641 AGCTTTTATGTATGGTCCAGGT 57.137 40.909 0.00 0.00 0.00 4.00
3017 3144 0.890683 AAGCTGGTGCCAAATGTAGC 59.109 50.000 0.00 0.00 40.80 3.58
3053 3180 5.249393 AGAAAAGTGTGAGATGGGTAGATGT 59.751 40.000 0.00 0.00 0.00 3.06
3096 3229 0.251698 TGTGCAAAGGATGGGCATCA 60.252 50.000 0.00 0.00 40.05 3.07
3121 3254 3.136791 GCTAGCTGCTTGTGGGGC 61.137 66.667 7.79 0.00 38.95 5.80
3141 3274 0.958091 CTCTCCCGTGCAGATCTAGG 59.042 60.000 0.00 0.00 0.00 3.02
3147 3280 1.478510 CCGTGCAGATCTAGGAAGTGT 59.521 52.381 0.00 0.00 0.00 3.55
3155 3288 5.625426 GCAGATCTAGGAAGTGTCACAATGA 60.625 44.000 5.62 0.00 0.00 2.57
3162 3295 8.912988 TCTAGGAAGTGTCACAATGAAATTTTT 58.087 29.630 5.62 0.00 31.22 1.94
3163 3296 9.185192 CTAGGAAGTGTCACAATGAAATTTTTC 57.815 33.333 5.62 0.00 31.22 2.29
3164 3297 7.785033 AGGAAGTGTCACAATGAAATTTTTCT 58.215 30.769 5.62 0.00 38.02 2.52
3165 3298 7.922811 AGGAAGTGTCACAATGAAATTTTTCTC 59.077 33.333 5.62 0.00 38.02 2.87
3166 3299 7.706179 GGAAGTGTCACAATGAAATTTTTCTCA 59.294 33.333 5.62 0.00 38.02 3.27
3167 3300 7.992180 AGTGTCACAATGAAATTTTTCTCAC 57.008 32.000 5.62 0.00 38.02 3.51
3168 3301 7.775120 AGTGTCACAATGAAATTTTTCTCACT 58.225 30.769 5.62 0.00 38.02 3.41
3182 3327 6.993786 TTTTCTCACTACACACATGACAAA 57.006 33.333 0.00 0.00 0.00 2.83
3183 3328 6.603237 TTTCTCACTACACACATGACAAAG 57.397 37.500 0.00 0.00 0.00 2.77
3184 3329 4.058124 TCTCACTACACACATGACAAAGC 58.942 43.478 0.00 0.00 0.00 3.51
3185 3330 2.799978 TCACTACACACATGACAAAGCG 59.200 45.455 0.00 0.00 0.00 4.68
3187 3332 2.143122 CTACACACATGACAAAGCGGT 58.857 47.619 0.00 0.00 0.00 5.68
3188 3333 0.662619 ACACACATGACAAAGCGGTG 59.337 50.000 0.00 0.00 35.66 4.94
3189 3334 0.662619 CACACATGACAAAGCGGTGT 59.337 50.000 0.00 0.00 42.94 4.16
3190 3335 0.662619 ACACATGACAAAGCGGTGTG 59.337 50.000 2.50 2.50 44.19 3.82
3191 3336 0.661187 CACATGACAAAGCGGTGTGC 60.661 55.000 4.28 0.00 46.98 4.57
3202 3347 1.959085 CGGTGTGCCAAGAAATGCT 59.041 52.632 0.00 0.00 34.09 3.79
3210 3355 4.199310 GTGCCAAGAAATGCTACTCCATA 58.801 43.478 0.00 0.00 0.00 2.74
3215 3360 6.039717 GCCAAGAAATGCTACTCCATAAATCA 59.960 38.462 0.00 0.00 0.00 2.57
3222 3367 8.798859 AATGCTACTCCATAAATCATCATACC 57.201 34.615 0.00 0.00 0.00 2.73
3234 3379 9.976511 ATAAATCATCATACCAAGAGCAAAATG 57.023 29.630 0.00 0.00 0.00 2.32
3250 3395 5.045872 GCAAAATGCAGATTAGATTCCACC 58.954 41.667 0.00 0.00 44.26 4.61
3251 3396 5.276270 CAAAATGCAGATTAGATTCCACCG 58.724 41.667 0.00 0.00 0.00 4.94
3252 3397 3.845781 ATGCAGATTAGATTCCACCGT 57.154 42.857 0.00 0.00 0.00 4.83
3253 3398 2.905075 TGCAGATTAGATTCCACCGTG 58.095 47.619 0.00 0.00 0.00 4.94
3254 3399 2.213499 GCAGATTAGATTCCACCGTGG 58.787 52.381 11.73 11.73 39.43 4.94
3255 3400 2.420129 GCAGATTAGATTCCACCGTGGT 60.420 50.000 17.32 0.00 39.03 4.16
3256 3401 3.873910 CAGATTAGATTCCACCGTGGTT 58.126 45.455 17.32 6.47 39.03 3.67
3257 3402 4.261801 CAGATTAGATTCCACCGTGGTTT 58.738 43.478 17.32 6.11 39.03 3.27
3258 3403 4.700213 CAGATTAGATTCCACCGTGGTTTT 59.300 41.667 17.32 3.61 39.03 2.43
3259 3404 4.941873 AGATTAGATTCCACCGTGGTTTTC 59.058 41.667 17.32 12.01 39.03 2.29
3260 3405 1.519408 AGATTCCACCGTGGTTTTCG 58.481 50.000 17.32 0.00 39.03 3.46
3261 3406 1.071071 AGATTCCACCGTGGTTTTCGA 59.929 47.619 17.32 0.00 39.03 3.71
3262 3407 2.081462 GATTCCACCGTGGTTTTCGAT 58.919 47.619 17.32 3.78 39.03 3.59
3263 3408 1.970092 TTCCACCGTGGTTTTCGATT 58.030 45.000 17.32 0.00 39.03 3.34
3264 3409 1.970092 TCCACCGTGGTTTTCGATTT 58.030 45.000 17.32 0.00 39.03 2.17
3265 3410 1.874872 TCCACCGTGGTTTTCGATTTC 59.125 47.619 17.32 0.00 39.03 2.17
3266 3411 1.604755 CCACCGTGGTTTTCGATTTCA 59.395 47.619 9.64 0.00 31.35 2.69
3267 3412 2.350388 CCACCGTGGTTTTCGATTTCAG 60.350 50.000 9.64 0.00 31.35 3.02
3268 3413 2.289547 CACCGTGGTTTTCGATTTCAGT 59.710 45.455 0.00 0.00 0.00 3.41
3269 3414 2.946990 ACCGTGGTTTTCGATTTCAGTT 59.053 40.909 0.00 0.00 0.00 3.16
3270 3415 3.379057 ACCGTGGTTTTCGATTTCAGTTT 59.621 39.130 0.00 0.00 0.00 2.66
3271 3416 3.972502 CCGTGGTTTTCGATTTCAGTTTC 59.027 43.478 0.00 0.00 0.00 2.78
3272 3417 4.496673 CCGTGGTTTTCGATTTCAGTTTCA 60.497 41.667 0.00 0.00 0.00 2.69
3273 3418 5.212194 CGTGGTTTTCGATTTCAGTTTCAT 58.788 37.500 0.00 0.00 0.00 2.57
3274 3419 6.367421 CGTGGTTTTCGATTTCAGTTTCATA 58.633 36.000 0.00 0.00 0.00 2.15
3275 3420 6.853872 CGTGGTTTTCGATTTCAGTTTCATAA 59.146 34.615 0.00 0.00 0.00 1.90
3276 3421 7.377397 CGTGGTTTTCGATTTCAGTTTCATAAA 59.623 33.333 0.00 0.00 0.00 1.40
3277 3422 9.026074 GTGGTTTTCGATTTCAGTTTCATAAAA 57.974 29.630 0.00 0.00 0.00 1.52
3278 3423 9.243637 TGGTTTTCGATTTCAGTTTCATAAAAG 57.756 29.630 0.00 0.00 0.00 2.27
3279 3424 9.244799 GGTTTTCGATTTCAGTTTCATAAAAGT 57.755 29.630 0.00 0.00 0.00 2.66
3284 3429 9.663904 TCGATTTCAGTTTCATAAAAGTTTCAG 57.336 29.630 0.00 0.00 0.00 3.02
3285 3430 8.420189 CGATTTCAGTTTCATAAAAGTTTCAGC 58.580 33.333 0.00 0.00 0.00 4.26
3286 3431 9.248291 GATTTCAGTTTCATAAAAGTTTCAGCA 57.752 29.630 0.00 0.00 0.00 4.41
3287 3432 7.985634 TTCAGTTTCATAAAAGTTTCAGCAC 57.014 32.000 0.00 0.00 0.00 4.40
3288 3433 6.503524 TCAGTTTCATAAAAGTTTCAGCACC 58.496 36.000 0.00 0.00 0.00 5.01
3289 3434 6.096141 TCAGTTTCATAAAAGTTTCAGCACCA 59.904 34.615 0.00 0.00 0.00 4.17
3290 3435 6.756074 CAGTTTCATAAAAGTTTCAGCACCAA 59.244 34.615 0.00 0.00 0.00 3.67
3291 3436 6.756542 AGTTTCATAAAAGTTTCAGCACCAAC 59.243 34.615 0.00 0.00 0.00 3.77
3292 3437 5.195001 TCATAAAAGTTTCAGCACCAACC 57.805 39.130 0.00 0.00 0.00 3.77
3293 3438 2.577449 AAAAGTTTCAGCACCAACCG 57.423 45.000 0.00 0.00 0.00 4.44
3294 3439 1.757682 AAAGTTTCAGCACCAACCGA 58.242 45.000 0.00 0.00 0.00 4.69
3295 3440 1.757682 AAGTTTCAGCACCAACCGAA 58.242 45.000 0.00 0.00 0.00 4.30
3296 3441 1.757682 AGTTTCAGCACCAACCGAAA 58.242 45.000 0.00 0.00 0.00 3.46
3297 3442 2.306847 AGTTTCAGCACCAACCGAAAT 58.693 42.857 0.00 0.00 30.68 2.17
3298 3443 2.293399 AGTTTCAGCACCAACCGAAATC 59.707 45.455 0.00 0.00 30.68 2.17
3299 3444 1.974265 TTCAGCACCAACCGAAATCA 58.026 45.000 0.00 0.00 0.00 2.57
3300 3445 1.234821 TCAGCACCAACCGAAATCAC 58.765 50.000 0.00 0.00 0.00 3.06
3301 3446 0.240945 CAGCACCAACCGAAATCACC 59.759 55.000 0.00 0.00 0.00 4.02
3302 3447 1.209127 GCACCAACCGAAATCACCG 59.791 57.895 0.00 0.00 0.00 4.94
3303 3448 1.231958 GCACCAACCGAAATCACCGA 61.232 55.000 0.00 0.00 0.00 4.69
3304 3449 1.231221 CACCAACCGAAATCACCGAA 58.769 50.000 0.00 0.00 0.00 4.30
3305 3450 1.604755 CACCAACCGAAATCACCGAAA 59.395 47.619 0.00 0.00 0.00 3.46
3306 3451 2.227865 CACCAACCGAAATCACCGAAAT 59.772 45.455 0.00 0.00 0.00 2.17
3307 3452 2.888414 ACCAACCGAAATCACCGAAATT 59.112 40.909 0.00 0.00 0.00 1.82
3308 3453 3.057806 ACCAACCGAAATCACCGAAATTC 60.058 43.478 0.00 0.00 0.00 2.17
3309 3454 3.057876 CCAACCGAAATCACCGAAATTCA 60.058 43.478 0.00 0.00 0.00 2.57
3310 3455 4.158384 CAACCGAAATCACCGAAATTCAG 58.842 43.478 0.00 0.00 0.00 3.02
3311 3456 3.408634 ACCGAAATCACCGAAATTCAGT 58.591 40.909 0.00 0.00 0.00 3.41
3312 3457 3.188460 ACCGAAATCACCGAAATTCAGTG 59.812 43.478 3.07 3.07 0.00 3.66
3313 3458 3.435327 CCGAAATCACCGAAATTCAGTGA 59.565 43.478 13.62 13.62 44.11 3.41
3314 3459 4.083537 CCGAAATCACCGAAATTCAGTGAA 60.084 41.667 15.00 8.27 43.29 3.18
3315 3460 5.391950 CCGAAATCACCGAAATTCAGTGAAT 60.392 40.000 15.00 12.75 43.29 2.57
3316 3461 6.086222 CGAAATCACCGAAATTCAGTGAATT 58.914 36.000 22.70 22.70 43.29 2.17
3332 3477 6.391227 AGTGAATTTCAGTGATTTCGGTTT 57.609 33.333 5.94 0.00 0.00 3.27
3333 3478 6.208644 AGTGAATTTCAGTGATTTCGGTTTG 58.791 36.000 5.94 0.00 0.00 2.93
3334 3479 4.981674 TGAATTTCAGTGATTTCGGTTTGC 59.018 37.500 0.00 0.00 0.00 3.68
3335 3480 2.679355 TTCAGTGATTTCGGTTTGCG 57.321 45.000 0.00 0.00 0.00 4.85
3336 3481 1.588674 TCAGTGATTTCGGTTTGCGT 58.411 45.000 0.00 0.00 0.00 5.24
3337 3482 1.944024 TCAGTGATTTCGGTTTGCGTT 59.056 42.857 0.00 0.00 0.00 4.84
3338 3483 2.356382 TCAGTGATTTCGGTTTGCGTTT 59.644 40.909 0.00 0.00 0.00 3.60
3339 3484 2.719046 CAGTGATTTCGGTTTGCGTTTC 59.281 45.455 0.00 0.00 0.00 2.78
3340 3485 1.706597 GTGATTTCGGTTTGCGTTTCG 59.293 47.619 0.00 0.00 0.00 3.46
3341 3486 1.323791 GATTTCGGTTTGCGTTTCGG 58.676 50.000 0.00 0.00 0.00 4.30
3342 3487 0.662077 ATTTCGGTTTGCGTTTCGGC 60.662 50.000 0.00 0.00 0.00 5.54
3343 3488 2.665172 TTTCGGTTTGCGTTTCGGCC 62.665 55.000 0.00 0.00 0.00 6.13
3345 3490 4.693525 GGTTTGCGTTTCGGCCGG 62.694 66.667 27.83 10.44 0.00 6.13
3346 3491 4.693525 GTTTGCGTTTCGGCCGGG 62.694 66.667 27.83 13.51 0.00 5.73
3359 3504 3.659850 GCCGGGCCAAAATATTCAC 57.340 52.632 8.12 0.00 0.00 3.18
3360 3505 1.111277 GCCGGGCCAAAATATTCACT 58.889 50.000 8.12 0.00 0.00 3.41
3361 3506 1.480545 GCCGGGCCAAAATATTCACTT 59.519 47.619 8.12 0.00 0.00 3.16
3362 3507 2.738321 GCCGGGCCAAAATATTCACTTG 60.738 50.000 8.12 0.00 0.00 3.16
3363 3508 2.757868 CCGGGCCAAAATATTCACTTGA 59.242 45.455 4.39 0.00 0.00 3.02
3364 3509 3.194542 CCGGGCCAAAATATTCACTTGAA 59.805 43.478 4.39 0.00 38.56 2.69
3365 3510 4.141959 CCGGGCCAAAATATTCACTTGAAT 60.142 41.667 4.39 9.37 45.77 2.57
3366 3511 5.418676 CGGGCCAAAATATTCACTTGAATT 58.581 37.500 4.39 0.00 41.64 2.17
3367 3512 5.519927 CGGGCCAAAATATTCACTTGAATTC 59.480 40.000 4.39 0.00 41.64 2.17
3368 3513 6.405538 GGGCCAAAATATTCACTTGAATTCA 58.594 36.000 4.39 3.38 41.64 2.57
3369 3514 6.878389 GGGCCAAAATATTCACTTGAATTCAA 59.122 34.615 19.45 19.45 41.64 2.69
3370 3515 7.553760 GGGCCAAAATATTCACTTGAATTCAAT 59.446 33.333 20.76 8.72 41.64 2.57
3371 3516 8.949177 GGCCAAAATATTCACTTGAATTCAATT 58.051 29.630 20.76 13.01 41.64 2.32
3424 3569 8.289618 TGAATTCTTGTGTACTACTGAAATTGC 58.710 33.333 7.05 0.00 0.00 3.56
3425 3570 7.986085 ATTCTTGTGTACTACTGAAATTGCT 57.014 32.000 0.00 0.00 0.00 3.91
3426 3571 9.502091 AATTCTTGTGTACTACTGAAATTGCTA 57.498 29.630 0.00 0.00 0.00 3.49
3427 3572 8.896320 TTCTTGTGTACTACTGAAATTGCTAA 57.104 30.769 0.00 0.00 0.00 3.09
3428 3573 9.502091 TTCTTGTGTACTACTGAAATTGCTAAT 57.498 29.630 0.00 0.00 0.00 1.73
3437 3582 8.197439 ACTACTGAAATTGCTAATATTTTGGCC 58.803 33.333 0.00 0.00 38.47 5.36
3438 3583 6.945218 ACTGAAATTGCTAATATTTTGGCCA 58.055 32.000 0.00 0.00 38.47 5.36
3439 3584 7.043565 ACTGAAATTGCTAATATTTTGGCCAG 58.956 34.615 5.11 4.43 38.47 4.85
3440 3585 7.093377 ACTGAAATTGCTAATATTTTGGCCAGA 60.093 33.333 5.11 0.00 38.47 3.86
3441 3586 7.619050 TGAAATTGCTAATATTTTGGCCAGAA 58.381 30.769 11.68 11.68 38.47 3.02
3442 3587 7.548780 TGAAATTGCTAATATTTTGGCCAGAAC 59.451 33.333 11.51 0.00 38.47 3.01
3443 3588 5.991933 TTGCTAATATTTTGGCCAGAACA 57.008 34.783 11.51 0.00 38.47 3.18
3444 3589 6.543430 TTGCTAATATTTTGGCCAGAACAT 57.457 33.333 11.51 1.65 38.47 2.71
3445 3590 7.652524 TTGCTAATATTTTGGCCAGAACATA 57.347 32.000 11.51 1.10 38.47 2.29
3446 3591 7.038154 TGCTAATATTTTGGCCAGAACATAC 57.962 36.000 11.51 0.00 38.47 2.39
3447 3592 6.605194 TGCTAATATTTTGGCCAGAACATACA 59.395 34.615 11.51 2.42 38.47 2.29
3448 3593 7.287466 TGCTAATATTTTGGCCAGAACATACAT 59.713 33.333 11.51 0.00 38.47 2.29
3449 3594 8.792633 GCTAATATTTTGGCCAGAACATACATA 58.207 33.333 11.51 0.00 33.52 2.29
3454 3599 7.473735 TTTTGGCCAGAACATACATATTTCA 57.526 32.000 5.11 0.00 0.00 2.69
3455 3600 6.698008 TTGGCCAGAACATACATATTTCAG 57.302 37.500 5.11 0.00 0.00 3.02
3456 3601 5.754782 TGGCCAGAACATACATATTTCAGT 58.245 37.500 0.00 0.00 0.00 3.41
3457 3602 5.589855 TGGCCAGAACATACATATTTCAGTG 59.410 40.000 0.00 0.00 0.00 3.66
3458 3603 5.506317 GGCCAGAACATACATATTTCAGTGC 60.506 44.000 0.00 0.00 0.00 4.40
3459 3604 5.506317 GCCAGAACATACATATTTCAGTGCC 60.506 44.000 0.00 0.00 0.00 5.01
3460 3605 5.589855 CCAGAACATACATATTTCAGTGCCA 59.410 40.000 0.00 0.00 0.00 4.92
3461 3606 6.238566 CCAGAACATACATATTTCAGTGCCAG 60.239 42.308 0.00 0.00 0.00 4.85
3462 3607 5.297776 AGAACATACATATTTCAGTGCCAGC 59.702 40.000 0.00 0.00 0.00 4.85
3463 3608 4.785301 ACATACATATTTCAGTGCCAGCT 58.215 39.130 0.00 0.00 0.00 4.24
3464 3609 4.577693 ACATACATATTTCAGTGCCAGCTG 59.422 41.667 6.78 6.78 37.81 4.24
3465 3610 3.354948 ACATATTTCAGTGCCAGCTGA 57.645 42.857 17.39 0.00 43.03 4.26
3466 3611 3.894759 ACATATTTCAGTGCCAGCTGAT 58.105 40.909 17.39 0.00 43.99 2.90
3467 3612 3.630769 ACATATTTCAGTGCCAGCTGATG 59.369 43.478 17.39 9.15 43.99 3.07
3468 3613 2.502142 ATTTCAGTGCCAGCTGATGA 57.498 45.000 17.39 10.81 43.99 2.92
3469 3614 2.275134 TTTCAGTGCCAGCTGATGAA 57.725 45.000 17.39 15.99 43.99 2.57
3470 3615 2.502142 TTCAGTGCCAGCTGATGAAT 57.498 45.000 17.39 0.00 43.99 2.57
3471 3616 2.502142 TCAGTGCCAGCTGATGAATT 57.498 45.000 17.39 0.00 40.23 2.17
3472 3617 2.799017 TCAGTGCCAGCTGATGAATTT 58.201 42.857 17.39 0.00 40.23 1.82
3473 3618 2.751259 TCAGTGCCAGCTGATGAATTTC 59.249 45.455 17.39 0.00 40.23 2.17
3474 3619 2.490509 CAGTGCCAGCTGATGAATTTCA 59.509 45.455 17.39 0.75 38.70 2.69
3475 3620 3.130516 CAGTGCCAGCTGATGAATTTCAT 59.869 43.478 17.39 11.64 40.34 2.57
3492 3637 9.687210 TGAATTTCATCAAAATCTCACTGAAAG 57.313 29.630 0.00 0.00 36.54 2.62
3493 3638 9.688592 GAATTTCATCAAAATCTCACTGAAAGT 57.311 29.630 0.00 0.00 42.23 2.66
3509 3654 5.138125 TGAAAGTGAAAGCCATGAATTCC 57.862 39.130 2.27 0.00 0.00 3.01
3510 3655 4.588106 TGAAAGTGAAAGCCATGAATTCCA 59.412 37.500 2.27 0.00 0.00 3.53
3511 3656 4.525912 AAGTGAAAGCCATGAATTCCAC 57.474 40.909 2.27 1.26 0.00 4.02
3512 3657 2.827921 AGTGAAAGCCATGAATTCCACC 59.172 45.455 2.27 0.00 0.00 4.61
3513 3658 2.562298 GTGAAAGCCATGAATTCCACCA 59.438 45.455 2.27 0.00 0.00 4.17
3514 3659 3.006752 GTGAAAGCCATGAATTCCACCAA 59.993 43.478 2.27 0.00 0.00 3.67
3515 3660 3.839490 TGAAAGCCATGAATTCCACCAAT 59.161 39.130 2.27 0.00 0.00 3.16
3516 3661 3.899052 AAGCCATGAATTCCACCAATG 57.101 42.857 2.27 0.00 0.00 2.82
3540 3689 9.732130 ATGGATAAAATAGGTTAATCTCAGCTC 57.268 33.333 0.00 0.00 0.00 4.09
3571 3720 3.344535 TGTAGCTCCCAATATCCTCCA 57.655 47.619 0.00 0.00 0.00 3.86
3572 3721 3.874316 TGTAGCTCCCAATATCCTCCAT 58.126 45.455 0.00 0.00 0.00 3.41
3583 3764 6.881065 CCCAATATCCTCCATATAACACACAG 59.119 42.308 0.00 0.00 0.00 3.66
3593 3774 5.579119 CCATATAACACACAGAAACGCTACA 59.421 40.000 0.00 0.00 0.00 2.74
3600 3781 1.623811 ACAGAAACGCTACACCCAGAT 59.376 47.619 0.00 0.00 0.00 2.90
3602 3783 1.066143 AGAAACGCTACACCCAGATGG 60.066 52.381 0.00 0.00 41.37 3.51
3622 3803 7.877097 CAGATGGGACCTTAAAGATAGATTCAG 59.123 40.741 0.00 0.00 0.00 3.02
3641 3822 1.354031 AGGGATACACAATGCACACCA 59.646 47.619 0.00 0.00 39.74 4.17
3679 3860 6.777213 ATAAACACCTCGAAGTCTAGACAT 57.223 37.500 24.44 13.35 0.00 3.06
3719 3900 5.298026 TCAAAAATCACGACAGGATCAAACA 59.702 36.000 0.00 0.00 0.00 2.83
3723 3904 3.536570 TCACGACAGGATCAAACACAAA 58.463 40.909 0.00 0.00 0.00 2.83
3724 3905 4.133820 TCACGACAGGATCAAACACAAAT 58.866 39.130 0.00 0.00 0.00 2.32
3943 4129 0.749649 CCCTGAAGTAGATGAGCGCT 59.250 55.000 11.27 11.27 0.00 5.92
3991 4177 2.098233 CATGGTCACACCGCCGTAC 61.098 63.158 0.00 0.00 42.58 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 9.975218 TGTATGATACTACCTCTCTAATGCATA 57.025 33.333 0.00 0.00 0.00 3.14
23 24 8.744652 GTGTATGATACTACCTCTCTAATGCAT 58.255 37.037 4.03 0.00 0.00 3.96
24 25 7.945109 AGTGTATGATACTACCTCTCTAATGCA 59.055 37.037 4.03 0.00 0.00 3.96
25 26 8.343168 AGTGTATGATACTACCTCTCTAATGC 57.657 38.462 4.03 0.00 0.00 3.56
60 61 9.355916 GGGAGTATCATATACTAGTATCATGCA 57.644 37.037 18.68 1.71 36.25 3.96
61 62 8.798402 GGGGAGTATCATATACTAGTATCATGC 58.202 40.741 18.68 12.34 36.25 4.06
62 63 9.868160 TGGGGAGTATCATATACTAGTATCATG 57.132 37.037 18.68 17.93 36.25 3.07
70 71 9.263446 GGTTGTAATGGGGAGTATCATATACTA 57.737 37.037 0.00 0.00 36.25 1.82
71 72 7.737607 TGGTTGTAATGGGGAGTATCATATACT 59.262 37.037 0.00 0.00 36.25 2.12
72 73 7.913789 TGGTTGTAATGGGGAGTATCATATAC 58.086 38.462 0.00 0.00 36.25 1.47
73 74 7.311046 GCTGGTTGTAATGGGGAGTATCATATA 60.311 40.741 0.00 0.00 36.25 0.86
74 75 6.522459 GCTGGTTGTAATGGGGAGTATCATAT 60.522 42.308 0.00 0.00 36.25 1.78
75 76 5.221843 GCTGGTTGTAATGGGGAGTATCATA 60.222 44.000 0.00 0.00 36.25 2.15
76 77 4.446311 GCTGGTTGTAATGGGGAGTATCAT 60.446 45.833 0.00 0.00 36.25 2.45
77 78 3.118038 GCTGGTTGTAATGGGGAGTATCA 60.118 47.826 0.00 0.00 36.25 2.15
78 79 3.477530 GCTGGTTGTAATGGGGAGTATC 58.522 50.000 0.00 0.00 0.00 2.24
79 80 2.174854 GGCTGGTTGTAATGGGGAGTAT 59.825 50.000 0.00 0.00 0.00 2.12
80 81 1.562475 GGCTGGTTGTAATGGGGAGTA 59.438 52.381 0.00 0.00 0.00 2.59
81 82 0.331616 GGCTGGTTGTAATGGGGAGT 59.668 55.000 0.00 0.00 0.00 3.85
82 83 0.625849 AGGCTGGTTGTAATGGGGAG 59.374 55.000 0.00 0.00 0.00 4.30
83 84 1.080638 AAGGCTGGTTGTAATGGGGA 58.919 50.000 0.00 0.00 0.00 4.81
84 85 2.818751 TAAGGCTGGTTGTAATGGGG 57.181 50.000 0.00 0.00 0.00 4.96
85 86 5.880901 AGATATAAGGCTGGTTGTAATGGG 58.119 41.667 0.00 0.00 0.00 4.00
92 93 9.737427 CGTCTATATTAGATATAAGGCTGGTTG 57.263 37.037 0.00 0.00 37.13 3.77
93 94 9.476928 ACGTCTATATTAGATATAAGGCTGGTT 57.523 33.333 0.00 0.00 37.13 3.67
94 95 9.122779 GACGTCTATATTAGATATAAGGCTGGT 57.877 37.037 8.70 0.00 37.13 4.00
95 96 8.283992 CGACGTCTATATTAGATATAAGGCTGG 58.716 40.741 14.70 0.00 37.13 4.85
96 97 8.283992 CCGACGTCTATATTAGATATAAGGCTG 58.716 40.741 14.70 0.00 37.13 4.85
97 98 7.992033 ACCGACGTCTATATTAGATATAAGGCT 59.008 37.037 14.70 0.00 37.13 4.58
98 99 8.068977 CACCGACGTCTATATTAGATATAAGGC 58.931 40.741 14.70 0.00 37.13 4.35
99 100 9.107177 ACACCGACGTCTATATTAGATATAAGG 57.893 37.037 14.70 3.79 37.13 2.69
104 105 9.881649 AGATAACACCGACGTCTATATTAGATA 57.118 33.333 14.70 0.00 37.13 1.98
105 106 8.789825 AGATAACACCGACGTCTATATTAGAT 57.210 34.615 14.70 0.00 37.13 1.98
106 107 9.881649 ATAGATAACACCGACGTCTATATTAGA 57.118 33.333 14.70 0.00 32.07 2.10
113 114 9.657419 TGATTATATAGATAACACCGACGTCTA 57.343 33.333 14.70 0.00 30.24 2.59
114 115 8.557592 TGATTATATAGATAACACCGACGTCT 57.442 34.615 14.70 0.00 30.24 4.18
115 116 9.784680 ATTGATTATATAGATAACACCGACGTC 57.215 33.333 5.18 5.18 30.24 4.34
147 148 9.851686 AGACATCAATTGTATGTTGGTATATGT 57.148 29.630 18.40 11.04 39.18 2.29
171 172 9.588774 GCGTGCAATTAATCGTATTAAATAAGA 57.411 29.630 0.00 0.00 0.00 2.10
172 173 9.594038 AGCGTGCAATTAATCGTATTAAATAAG 57.406 29.630 0.00 0.00 0.00 1.73
175 176 9.938670 TTTAGCGTGCAATTAATCGTATTAAAT 57.061 25.926 0.00 0.00 0.00 1.40
176 177 9.212687 GTTTAGCGTGCAATTAATCGTATTAAA 57.787 29.630 0.00 0.00 0.00 1.52
177 178 8.388853 TGTTTAGCGTGCAATTAATCGTATTAA 58.611 29.630 0.00 0.00 0.00 1.40
178 179 7.907194 TGTTTAGCGTGCAATTAATCGTATTA 58.093 30.769 0.00 0.00 0.00 0.98
179 180 6.777101 TGTTTAGCGTGCAATTAATCGTATT 58.223 32.000 0.00 0.00 0.00 1.89
180 181 6.352682 TGTTTAGCGTGCAATTAATCGTAT 57.647 33.333 0.00 0.00 0.00 3.06
181 182 5.781452 TGTTTAGCGTGCAATTAATCGTA 57.219 34.783 0.00 0.00 0.00 3.43
182 183 4.671880 TGTTTAGCGTGCAATTAATCGT 57.328 36.364 0.00 0.00 0.00 3.73
183 184 5.619607 GGTATGTTTAGCGTGCAATTAATCG 59.380 40.000 0.00 0.00 0.00 3.34
184 185 5.619607 CGGTATGTTTAGCGTGCAATTAATC 59.380 40.000 0.00 0.00 42.76 1.75
185 186 5.504994 CCGGTATGTTTAGCGTGCAATTAAT 60.505 40.000 0.00 0.00 45.46 1.40
186 187 4.201832 CCGGTATGTTTAGCGTGCAATTAA 60.202 41.667 0.00 0.00 45.46 1.40
187 188 3.310227 CCGGTATGTTTAGCGTGCAATTA 59.690 43.478 0.00 0.00 45.46 1.40
188 189 2.096819 CCGGTATGTTTAGCGTGCAATT 59.903 45.455 0.00 0.00 45.46 2.32
189 190 1.668751 CCGGTATGTTTAGCGTGCAAT 59.331 47.619 0.00 0.00 45.46 3.56
190 191 1.080298 CCGGTATGTTTAGCGTGCAA 58.920 50.000 0.00 0.00 45.46 4.08
191 192 0.741574 CCCGGTATGTTTAGCGTGCA 60.742 55.000 0.00 0.00 45.46 4.57
192 193 2.011453 CCCGGTATGTTTAGCGTGC 58.989 57.895 0.00 0.00 45.46 5.34
193 194 1.758319 CGCCCGGTATGTTTAGCGTG 61.758 60.000 8.97 0.00 45.46 5.34
194 195 1.519898 CGCCCGGTATGTTTAGCGT 60.520 57.895 8.97 0.00 45.46 5.07
195 196 2.877974 GCGCCCGGTATGTTTAGCG 61.878 63.158 12.26 12.26 46.25 4.26
196 197 2.877974 CGCGCCCGGTATGTTTAGC 61.878 63.158 0.00 0.00 0.00 3.09
197 198 3.315796 CGCGCCCGGTATGTTTAG 58.684 61.111 0.00 0.00 0.00 1.85
207 208 2.816083 TGTGTTTATCCGCGCCCG 60.816 61.111 0.00 0.00 0.00 6.13
208 209 1.743995 AGTGTGTTTATCCGCGCCC 60.744 57.895 0.00 0.00 0.00 6.13
209 210 1.423845 CAGTGTGTTTATCCGCGCC 59.576 57.895 0.00 0.00 0.00 6.53
210 211 1.226018 GCAGTGTGTTTATCCGCGC 60.226 57.895 0.00 0.00 0.00 6.86
211 212 1.058748 CGCAGTGTGTTTATCCGCG 59.941 57.895 0.00 0.00 34.89 6.46
212 213 1.226018 GCGCAGTGTGTTTATCCGC 60.226 57.895 0.30 0.00 0.00 5.54
213 214 1.423845 GGCGCAGTGTGTTTATCCG 59.576 57.895 10.83 0.00 0.00 4.18
214 215 0.958382 TGGGCGCAGTGTGTTTATCC 60.958 55.000 10.83 0.00 0.00 2.59
215 216 0.447801 CTGGGCGCAGTGTGTTTATC 59.552 55.000 21.92 0.00 0.00 1.75
216 217 1.586154 GCTGGGCGCAGTGTGTTTAT 61.586 55.000 28.97 0.00 38.92 1.40
217 218 2.258013 GCTGGGCGCAGTGTGTTTA 61.258 57.895 28.97 0.00 38.92 2.01
218 219 3.595758 GCTGGGCGCAGTGTGTTT 61.596 61.111 28.97 0.00 38.92 2.83
219 220 4.873810 TGCTGGGCGCAGTGTGTT 62.874 61.111 28.97 0.00 45.47 3.32
241 242 3.981211 ACAATCGCATGCAACTCTTTTT 58.019 36.364 19.57 0.00 0.00 1.94
242 243 3.648339 ACAATCGCATGCAACTCTTTT 57.352 38.095 19.57 0.00 0.00 2.27
243 244 3.243501 ACAACAATCGCATGCAACTCTTT 60.244 39.130 19.57 0.00 0.00 2.52
244 245 2.294233 ACAACAATCGCATGCAACTCTT 59.706 40.909 19.57 0.00 0.00 2.85
245 246 1.881973 ACAACAATCGCATGCAACTCT 59.118 42.857 19.57 0.00 0.00 3.24
246 247 1.980844 CACAACAATCGCATGCAACTC 59.019 47.619 19.57 0.00 0.00 3.01
247 248 1.336148 CCACAACAATCGCATGCAACT 60.336 47.619 19.57 0.00 0.00 3.16
248 249 1.062258 CCACAACAATCGCATGCAAC 58.938 50.000 19.57 0.00 0.00 4.17
249 250 0.957362 TCCACAACAATCGCATGCAA 59.043 45.000 19.57 0.00 0.00 4.08
250 251 0.522626 CTCCACAACAATCGCATGCA 59.477 50.000 19.57 5.34 0.00 3.96
251 252 0.804364 TCTCCACAACAATCGCATGC 59.196 50.000 7.91 7.91 0.00 4.06
252 253 1.399440 CCTCTCCACAACAATCGCATG 59.601 52.381 0.00 0.00 0.00 4.06
253 254 1.742761 CCTCTCCACAACAATCGCAT 58.257 50.000 0.00 0.00 0.00 4.73
254 255 0.955428 GCCTCTCCACAACAATCGCA 60.955 55.000 0.00 0.00 0.00 5.10
255 256 0.674895 AGCCTCTCCACAACAATCGC 60.675 55.000 0.00 0.00 0.00 4.58
256 257 1.066573 AGAGCCTCTCCACAACAATCG 60.067 52.381 0.00 0.00 0.00 3.34
257 258 2.777832 AGAGCCTCTCCACAACAATC 57.222 50.000 0.00 0.00 0.00 2.67
258 259 3.840666 TCTTAGAGCCTCTCCACAACAAT 59.159 43.478 0.00 0.00 0.00 2.71
259 260 3.239449 TCTTAGAGCCTCTCCACAACAA 58.761 45.455 0.00 0.00 0.00 2.83
260 261 2.889512 TCTTAGAGCCTCTCCACAACA 58.110 47.619 0.00 0.00 0.00 3.33
261 262 4.187694 CAATCTTAGAGCCTCTCCACAAC 58.812 47.826 0.00 0.00 0.00 3.32
262 263 3.198635 CCAATCTTAGAGCCTCTCCACAA 59.801 47.826 0.00 0.00 0.00 3.33
263 264 2.768527 CCAATCTTAGAGCCTCTCCACA 59.231 50.000 0.00 0.00 0.00 4.17
264 265 2.484594 GCCAATCTTAGAGCCTCTCCAC 60.485 54.545 0.00 0.00 0.00 4.02
265 266 1.765314 GCCAATCTTAGAGCCTCTCCA 59.235 52.381 0.00 0.00 0.00 3.86
271 272 0.748005 TTGCCGCCAATCTTAGAGCC 60.748 55.000 0.00 0.00 0.00 4.70
317 322 2.486918 CACATAGGCATGCGAGATCAA 58.513 47.619 12.44 0.00 35.39 2.57
381 386 2.937149 GGAGAAAAAGAGCCACGATACC 59.063 50.000 0.00 0.00 0.00 2.73
392 397 2.494059 CGAGGTTGCAGGAGAAAAAGA 58.506 47.619 0.00 0.00 0.00 2.52
394 399 1.142060 TCCGAGGTTGCAGGAGAAAAA 59.858 47.619 0.00 0.00 0.00 1.94
416 421 3.206150 AGCTCGATGTCTCTCTCTTCTC 58.794 50.000 0.00 0.00 0.00 2.87
419 424 3.088532 ACAAGCTCGATGTCTCTCTCTT 58.911 45.455 0.00 0.00 0.00 2.85
488 507 6.248631 CGGGATCGTATCTTGTTTCTTTTTC 58.751 40.000 0.00 0.00 0.00 2.29
510 529 0.683412 TGAGATGAGATGATGGCCGG 59.317 55.000 0.00 0.00 0.00 6.13
511 530 2.234168 AGATGAGATGAGATGATGGCCG 59.766 50.000 0.00 0.00 0.00 6.13
512 531 3.261137 TGAGATGAGATGAGATGATGGCC 59.739 47.826 0.00 0.00 0.00 5.36
513 532 4.538746 TGAGATGAGATGAGATGATGGC 57.461 45.455 0.00 0.00 0.00 4.40
524 543 3.664127 AGAGGAGGGAGATGAGATGAGAT 59.336 47.826 0.00 0.00 0.00 2.75
546 565 2.093394 CACTAGACACGGAGAGAGAGGA 60.093 54.545 0.00 0.00 0.00 3.71
547 566 2.093394 TCACTAGACACGGAGAGAGAGG 60.093 54.545 0.00 0.00 0.00 3.69
548 567 3.194861 CTCACTAGACACGGAGAGAGAG 58.805 54.545 0.00 0.00 33.66 3.20
695 714 1.746171 GCCTACCGGATCAAGAAACCC 60.746 57.143 9.46 0.00 0.00 4.11
745 767 0.822164 GGACAAGGGACTAGCGCTAA 59.178 55.000 19.37 2.45 38.49 3.09
759 781 3.003173 CGAGGAGGCAGGGGACAA 61.003 66.667 0.00 0.00 0.00 3.18
765 787 4.785453 GCAACCCGAGGAGGCAGG 62.785 72.222 0.00 0.00 39.21 4.85
819 841 3.237741 GGCCGGAGAGGGGAGATG 61.238 72.222 5.05 0.00 41.48 2.90
901 923 2.491693 CACACCACCAAATGTATGGGAC 59.508 50.000 0.00 0.00 45.18 4.46
995 1017 2.894387 GCTCCTGCACCATCTCGC 60.894 66.667 0.00 0.00 39.41 5.03
1282 1310 2.281345 CGGATGATGGAGCAGGGC 60.281 66.667 0.00 0.00 0.00 5.19
1284 1312 2.281345 GGCGGATGATGGAGCAGG 60.281 66.667 0.00 0.00 0.00 4.85
1401 1432 1.677217 GGGCACAGGCTTCTCTTGTAG 60.677 57.143 0.00 0.00 40.87 2.74
1425 1456 0.107165 GTACCATTGGGAGTGGAGGC 60.107 60.000 7.78 0.00 39.12 4.70
1465 1496 4.767255 GTGGAGTGGAGGCTGCGG 62.767 72.222 0.35 0.00 0.00 5.69
1467 1498 3.941657 GACGTGGAGTGGAGGCTGC 62.942 68.421 0.00 0.00 0.00 5.25
1468 1499 2.262915 GACGTGGAGTGGAGGCTG 59.737 66.667 0.00 0.00 0.00 4.85
1469 1500 2.203640 TGACGTGGAGTGGAGGCT 60.204 61.111 0.00 0.00 0.00 4.58
1470 1501 2.048127 GTGACGTGGAGTGGAGGC 60.048 66.667 0.00 0.00 0.00 4.70
1471 1502 2.258591 CGTGACGTGGAGTGGAGG 59.741 66.667 0.00 0.00 0.00 4.30
1472 1503 2.258591 CCGTGACGTGGAGTGGAG 59.741 66.667 3.64 0.00 0.00 3.86
1473 1504 3.986006 GCCGTGACGTGGAGTGGA 61.986 66.667 3.64 0.00 0.00 4.02
1474 1505 4.293648 TGCCGTGACGTGGAGTGG 62.294 66.667 3.64 0.00 0.00 4.00
1475 1506 3.036084 GTGCCGTGACGTGGAGTG 61.036 66.667 3.64 0.00 0.00 3.51
1476 1507 4.640855 CGTGCCGTGACGTGGAGT 62.641 66.667 3.64 0.00 34.56 3.85
1483 1514 3.550992 CATACGCCGTGCCGTGAC 61.551 66.667 0.00 0.00 42.15 3.67
1488 1519 1.885388 TACATGCATACGCCGTGCC 60.885 57.895 0.00 0.00 41.83 5.01
1506 1537 1.132643 GAGACCTCGTTCGTGCATAGT 59.867 52.381 0.00 0.00 0.00 2.12
1511 1542 0.507358 GTTTGAGACCTCGTTCGTGC 59.493 55.000 0.00 0.00 0.00 5.34
1533 1570 1.495951 GTCGGCGAAAGATTTGCGT 59.504 52.632 12.92 0.00 0.00 5.24
1597 1635 1.360393 TGGTTTGAAGGGGGCTCTGT 61.360 55.000 0.00 0.00 0.00 3.41
1599 1637 0.560688 TTTGGTTTGAAGGGGGCTCT 59.439 50.000 0.00 0.00 0.00 4.09
1628 1666 4.079850 CGCTGCTCCTCCTGCTGT 62.080 66.667 0.00 0.00 0.00 4.40
1668 1715 6.380846 AGAGATATATACGTACCCTCTCGTCT 59.619 42.308 0.00 0.00 40.70 4.18
1710 1757 2.997980 TCACAGGCAAGTTCAAGTTCA 58.002 42.857 0.00 0.00 0.00 3.18
1711 1758 3.304928 CCATCACAGGCAAGTTCAAGTTC 60.305 47.826 0.00 0.00 0.00 3.01
1712 1759 2.624838 CCATCACAGGCAAGTTCAAGTT 59.375 45.455 0.00 0.00 0.00 2.66
1713 1760 2.158623 TCCATCACAGGCAAGTTCAAGT 60.159 45.455 0.00 0.00 0.00 3.16
1714 1761 2.507484 TCCATCACAGGCAAGTTCAAG 58.493 47.619 0.00 0.00 0.00 3.02
1715 1762 2.655090 TCCATCACAGGCAAGTTCAA 57.345 45.000 0.00 0.00 0.00 2.69
1754 1801 0.737219 CGGTTCCTACACTCTACCCG 59.263 60.000 0.00 0.00 0.00 5.28
1897 1944 0.977627 TCAGGAGTGACATCGGCCAT 60.978 55.000 2.24 0.00 0.00 4.40
1908 1955 1.193323 ATCTGCTCAGGTCAGGAGTG 58.807 55.000 0.00 0.00 33.66 3.51
1989 2036 7.669722 ACAGAGGCAGGAATTTAAACTTTGATA 59.330 33.333 0.00 0.00 0.00 2.15
2006 2053 1.018226 CGAGGAGCAAACAGAGGCAG 61.018 60.000 0.00 0.00 0.00 4.85
2040 2087 6.040278 TCTGGAAATAACAATGCAGTGAAACA 59.960 34.615 22.73 8.41 41.43 2.83
2041 2088 6.446318 TCTGGAAATAACAATGCAGTGAAAC 58.554 36.000 22.73 5.69 36.51 2.78
2085 2135 5.720041 AGGAGTAACTGCAGGATACAAGTTA 59.280 40.000 24.91 9.82 37.86 2.24
2086 2136 4.532521 AGGAGTAACTGCAGGATACAAGTT 59.467 41.667 24.91 10.67 39.42 2.66
2087 2137 4.097418 AGGAGTAACTGCAGGATACAAGT 58.903 43.478 24.91 11.33 41.41 3.16
2097 2147 2.972713 GGGATGGATAGGAGTAACTGCA 59.027 50.000 0.00 0.00 0.00 4.41
2122 2222 8.736244 GGAATGAAGCTGTAATTTTTAGTGGTA 58.264 33.333 0.00 0.00 0.00 3.25
2123 2223 7.574967 CGGAATGAAGCTGTAATTTTTAGTGGT 60.575 37.037 0.00 0.00 0.00 4.16
2124 2224 6.747280 CGGAATGAAGCTGTAATTTTTAGTGG 59.253 38.462 0.00 0.00 0.00 4.00
2133 2233 4.323417 TCAACACGGAATGAAGCTGTAAT 58.677 39.130 0.00 0.00 0.00 1.89
2145 2245 7.747155 TTTATCAGGTAAATTCAACACGGAA 57.253 32.000 0.00 0.00 0.00 4.30
2146 2246 7.747155 TTTTATCAGGTAAATTCAACACGGA 57.253 32.000 0.00 0.00 32.56 4.69
2231 2332 7.467623 TCAAAACAAATTGTGCCAAAATGTAC 58.532 30.769 0.00 0.00 0.00 2.90
2244 2345 8.141268 ACACTAGGTTGGTATCAAAACAAATTG 58.859 33.333 0.00 0.00 34.28 2.32
2259 2361 3.771577 ACTCCAAGAACACTAGGTTGG 57.228 47.619 0.00 0.00 40.63 3.77
2265 2367 9.696572 AACAGACTATATACTCCAAGAACACTA 57.303 33.333 0.00 0.00 0.00 2.74
2266 2368 8.596781 AACAGACTATATACTCCAAGAACACT 57.403 34.615 0.00 0.00 0.00 3.55
2283 2385 5.984725 TGAAGGTGAGAAACAAACAGACTA 58.015 37.500 0.00 0.00 0.00 2.59
2284 2386 4.843728 TGAAGGTGAGAAACAAACAGACT 58.156 39.130 0.00 0.00 0.00 3.24
2285 2387 5.529060 AGATGAAGGTGAGAAACAAACAGAC 59.471 40.000 0.00 0.00 0.00 3.51
2287 2389 5.297776 ACAGATGAAGGTGAGAAACAAACAG 59.702 40.000 0.00 0.00 0.00 3.16
2290 2392 4.036734 GCACAGATGAAGGTGAGAAACAAA 59.963 41.667 0.00 0.00 37.18 2.83
2297 2399 0.036952 ACCGCACAGATGAAGGTGAG 60.037 55.000 0.00 0.00 37.11 3.51
2362 2464 3.851845 TTGCCGTGACCGAACTCCG 62.852 63.158 0.00 0.00 35.63 4.63
2363 2465 2.027625 CTTGCCGTGACCGAACTCC 61.028 63.158 0.00 0.00 35.63 3.85
2385 2487 4.874977 GTCTCTGCTACGGCCGGC 62.875 72.222 31.76 24.40 37.74 6.13
2426 2528 3.402681 ATGAGGTGTGGAGGCCGG 61.403 66.667 0.00 0.00 0.00 6.13
2438 2540 3.802862 ATGAGGCTGCTTCATGAGG 57.197 52.632 24.10 0.00 34.14 3.86
2446 2548 2.360852 GCACCACATGAGGCTGCT 60.361 61.111 20.86 0.00 34.77 4.24
2487 2589 2.358003 GCTGGCACTGAAGTCGCT 60.358 61.111 0.00 0.00 0.00 4.93
2514 2622 2.919494 GCGTTTCACTTGCCTGGGG 61.919 63.158 0.00 0.00 0.00 4.96
2556 2665 4.040339 TGGAGTCAAATCTAGCTCACACAA 59.960 41.667 0.00 0.00 0.00 3.33
2567 2676 7.173722 AGATTTCATCAGTTGGAGTCAAATCT 58.826 34.615 0.00 0.00 35.49 2.40
2569 2678 7.771927 AAGATTTCATCAGTTGGAGTCAAAT 57.228 32.000 0.00 0.00 34.28 2.32
2571 2680 7.000472 AGAAAGATTTCATCAGTTGGAGTCAA 59.000 34.615 7.97 0.00 39.61 3.18
2577 2686 7.387119 TGATCAGAAAGATTTCATCAGTTGG 57.613 36.000 7.97 0.00 39.61 3.77
2578 2687 6.967767 GCTGATCAGAAAGATTTCATCAGTTG 59.032 38.462 27.04 9.20 39.55 3.16
2590 2699 1.836166 CTCCCCAGCTGATCAGAAAGA 59.164 52.381 27.04 12.86 0.00 2.52
2595 2704 2.108566 CGCTCCCCAGCTGATCAG 59.891 66.667 18.84 18.84 44.40 2.90
2605 2714 2.391389 CGAAGCTGAAACGCTCCCC 61.391 63.158 0.00 0.00 39.86 4.81
2624 2733 1.437573 GCAGGGACGACGATGATGA 59.562 57.895 0.00 0.00 0.00 2.92
2626 2735 1.402896 ATGGCAGGGACGACGATGAT 61.403 55.000 0.00 0.00 0.00 2.45
2719 2828 0.253327 GCTCCAAGTCGATTTCCCCT 59.747 55.000 0.00 0.00 0.00 4.79
2740 2849 2.105477 TGATCAGCCCTTCCATAGCTTC 59.895 50.000 0.00 0.00 33.70 3.86
2759 2868 7.363181 CCTCCTAAATGTTCATTGCAGATTTGA 60.363 37.037 2.45 0.00 0.00 2.69
2779 2888 2.621070 AGCTTTCTCCACAACCTCCTA 58.379 47.619 0.00 0.00 0.00 2.94
2784 2893 4.021016 TCTCTCTTAGCTTTCTCCACAACC 60.021 45.833 0.00 0.00 0.00 3.77
2796 2905 4.769488 TGAACACATCTGTCTCTCTTAGCT 59.231 41.667 0.00 0.00 0.00 3.32
2798 2907 6.686630 ACTTGAACACATCTGTCTCTCTTAG 58.313 40.000 0.00 0.00 0.00 2.18
2801 2910 5.772672 ACTACTTGAACACATCTGTCTCTCT 59.227 40.000 0.00 0.00 0.00 3.10
2836 2946 4.937620 CCTAGAAAGCAGCTGTTTGATACA 59.062 41.667 17.08 0.53 34.95 2.29
2837 2947 5.178797 TCCTAGAAAGCAGCTGTTTGATAC 58.821 41.667 17.08 8.84 0.00 2.24
2838 2948 5.187772 TCTCCTAGAAAGCAGCTGTTTGATA 59.812 40.000 17.08 11.24 0.00 2.15
2839 2949 4.019860 TCTCCTAGAAAGCAGCTGTTTGAT 60.020 41.667 17.08 10.70 0.00 2.57
2840 2950 3.324846 TCTCCTAGAAAGCAGCTGTTTGA 59.675 43.478 17.08 8.18 0.00 2.69
2841 2951 3.668447 TCTCCTAGAAAGCAGCTGTTTG 58.332 45.455 17.08 3.96 0.00 2.93
2842 2952 4.260170 CATCTCCTAGAAAGCAGCTGTTT 58.740 43.478 16.64 13.48 0.00 2.83
2845 2955 3.540314 ACATCTCCTAGAAAGCAGCTG 57.460 47.619 10.11 10.11 0.00 4.24
2848 2958 5.936956 AGTGAAAACATCTCCTAGAAAGCAG 59.063 40.000 0.00 0.00 0.00 4.24
2851 2961 6.931281 TGACAGTGAAAACATCTCCTAGAAAG 59.069 38.462 0.00 0.00 0.00 2.62
2859 2969 8.316640 AGACTTATTGACAGTGAAAACATCTC 57.683 34.615 0.00 0.00 0.00 2.75
2862 2972 8.562892 CAGAAGACTTATTGACAGTGAAAACAT 58.437 33.333 0.00 0.00 0.00 2.71
2863 2973 7.012327 CCAGAAGACTTATTGACAGTGAAAACA 59.988 37.037 0.00 0.00 0.00 2.83
2864 2974 7.012421 ACCAGAAGACTTATTGACAGTGAAAAC 59.988 37.037 0.00 0.00 0.00 2.43
2874 2988 5.013079 ACCATGTCACCAGAAGACTTATTGA 59.987 40.000 0.00 0.00 36.94 2.57
2881 2995 6.575162 AAATTAACCATGTCACCAGAAGAC 57.425 37.500 0.00 0.00 36.55 3.01
2882 2996 6.657541 GGTAAATTAACCATGTCACCAGAAGA 59.342 38.462 0.00 0.00 39.50 2.87
2893 3007 8.732746 ACTAGTTGCTAGGTAAATTAACCATG 57.267 34.615 7.91 0.00 42.40 3.66
2909 3023 9.804758 GTCAGAAATAACATACTACTAGTTGCT 57.195 33.333 0.00 0.00 0.00 3.91
2910 3024 8.744011 CGTCAGAAATAACATACTACTAGTTGC 58.256 37.037 0.00 0.00 0.00 4.17
2911 3025 9.999009 TCGTCAGAAATAACATACTACTAGTTG 57.001 33.333 0.00 0.59 0.00 3.16
2915 3029 9.999009 CACTTCGTCAGAAATAACATACTACTA 57.001 33.333 0.00 0.00 35.71 1.82
2916 3030 8.737175 TCACTTCGTCAGAAATAACATACTACT 58.263 33.333 0.00 0.00 35.71 2.57
2917 3031 8.906636 TCACTTCGTCAGAAATAACATACTAC 57.093 34.615 0.00 0.00 35.71 2.73
2918 3032 9.569167 CTTCACTTCGTCAGAAATAACATACTA 57.431 33.333 0.00 0.00 35.71 1.82
2919 3033 8.088981 ACTTCACTTCGTCAGAAATAACATACT 58.911 33.333 0.00 0.00 35.71 2.12
2920 3034 8.240883 ACTTCACTTCGTCAGAAATAACATAC 57.759 34.615 0.00 0.00 35.71 2.39
2921 3035 9.569167 CTACTTCACTTCGTCAGAAATAACATA 57.431 33.333 0.00 0.00 35.71 2.29
2922 3036 8.304596 TCTACTTCACTTCGTCAGAAATAACAT 58.695 33.333 0.00 0.00 35.71 2.71
2923 3037 7.654568 TCTACTTCACTTCGTCAGAAATAACA 58.345 34.615 0.00 0.00 35.71 2.41
2924 3038 7.201367 GCTCTACTTCACTTCGTCAGAAATAAC 60.201 40.741 0.00 0.00 35.71 1.89
2925 3039 6.807230 GCTCTACTTCACTTCGTCAGAAATAA 59.193 38.462 0.00 0.00 35.71 1.40
2926 3040 6.072119 TGCTCTACTTCACTTCGTCAGAAATA 60.072 38.462 0.00 0.00 35.71 1.40
2934 3061 1.613925 TGCTGCTCTACTTCACTTCGT 59.386 47.619 0.00 0.00 0.00 3.85
2953 3080 1.132453 CTGCTTCCATCATGCACACTG 59.868 52.381 0.00 0.00 31.96 3.66
2954 3081 1.460504 CTGCTTCCATCATGCACACT 58.539 50.000 0.00 0.00 31.96 3.55
2955 3082 0.454600 CCTGCTTCCATCATGCACAC 59.545 55.000 0.00 0.00 31.96 3.82
2975 3102 5.193099 ACCTGGACCATACATAAAAGCTT 57.807 39.130 0.00 0.00 0.00 3.74
2997 3124 2.091541 GCTACATTTGGCACCAGCTTA 58.908 47.619 0.00 0.00 41.70 3.09
3017 3144 6.092670 TCTCACACTTTTCTGTTGAGTTTCTG 59.907 38.462 0.00 0.00 0.00 3.02
3121 3254 0.958091 CTAGATCTGCACGGGAGAGG 59.042 60.000 5.18 0.00 0.00 3.69
3128 3261 2.164422 TGACACTTCCTAGATCTGCACG 59.836 50.000 5.18 0.00 0.00 5.34
3134 3267 7.856145 ATTTCATTGTGACACTTCCTAGATC 57.144 36.000 7.20 0.00 0.00 2.75
3141 3274 8.534778 GTGAGAAAAATTTCATTGTGACACTTC 58.465 33.333 7.20 0.00 39.61 3.01
3147 3280 8.681806 TGTGTAGTGAGAAAAATTTCATTGTGA 58.318 29.630 8.47 0.00 39.61 3.58
3155 3288 7.995289 TGTCATGTGTGTAGTGAGAAAAATTT 58.005 30.769 0.00 0.00 0.00 1.82
3162 3295 4.058124 GCTTTGTCATGTGTGTAGTGAGA 58.942 43.478 0.00 0.00 0.00 3.27
3163 3296 3.120889 CGCTTTGTCATGTGTGTAGTGAG 60.121 47.826 0.00 0.00 0.00 3.51
3164 3297 2.799978 CGCTTTGTCATGTGTGTAGTGA 59.200 45.455 0.00 0.00 0.00 3.41
3165 3298 2.096268 CCGCTTTGTCATGTGTGTAGTG 60.096 50.000 0.00 0.00 0.00 2.74
3166 3299 2.143122 CCGCTTTGTCATGTGTGTAGT 58.857 47.619 0.00 0.00 0.00 2.73
3167 3300 2.096268 CACCGCTTTGTCATGTGTGTAG 60.096 50.000 0.00 0.00 0.00 2.74
3168 3301 1.870402 CACCGCTTTGTCATGTGTGTA 59.130 47.619 0.00 0.00 0.00 2.90
3182 3327 1.959085 CATTTCTTGGCACACCGCT 59.041 52.632 0.00 0.00 39.29 5.52
3183 3328 1.734117 GCATTTCTTGGCACACCGC 60.734 57.895 0.00 0.00 39.29 5.68
3184 3329 1.135689 GTAGCATTTCTTGGCACACCG 60.136 52.381 0.00 0.00 39.29 4.94
3185 3330 2.162408 GAGTAGCATTTCTTGGCACACC 59.838 50.000 0.00 0.00 39.29 4.16
3187 3332 2.224744 TGGAGTAGCATTTCTTGGCACA 60.225 45.455 0.00 0.00 0.00 4.57
3188 3333 2.436417 TGGAGTAGCATTTCTTGGCAC 58.564 47.619 0.00 0.00 0.00 5.01
3189 3334 2.877097 TGGAGTAGCATTTCTTGGCA 57.123 45.000 0.00 0.00 0.00 4.92
3190 3335 5.835113 TTTATGGAGTAGCATTTCTTGGC 57.165 39.130 0.00 0.00 0.00 4.52
3191 3336 7.572523 TGATTTATGGAGTAGCATTTCTTGG 57.427 36.000 0.00 0.00 0.00 3.61
3192 3337 8.843262 TGATGATTTATGGAGTAGCATTTCTTG 58.157 33.333 0.00 0.00 0.00 3.02
3193 3338 8.985315 TGATGATTTATGGAGTAGCATTTCTT 57.015 30.769 0.00 0.00 0.00 2.52
3202 3347 8.097038 GCTCTTGGTATGATGATTTATGGAGTA 58.903 37.037 0.00 0.00 0.00 2.59
3210 3355 6.759827 GCATTTTGCTCTTGGTATGATGATTT 59.240 34.615 0.00 0.00 40.96 2.17
3215 3360 4.951715 TCTGCATTTTGCTCTTGGTATGAT 59.048 37.500 0.75 0.00 45.31 2.45
3222 3367 6.696148 GGAATCTAATCTGCATTTTGCTCTTG 59.304 38.462 0.75 0.00 45.31 3.02
3234 3379 2.213499 CCACGGTGGAATCTAATCTGC 58.787 52.381 22.77 0.00 40.96 4.26
3240 3385 2.299582 TCGAAAACCACGGTGGAATCTA 59.700 45.455 32.72 15.69 40.96 1.98
3241 3386 1.071071 TCGAAAACCACGGTGGAATCT 59.929 47.619 32.72 13.92 40.96 2.40
3242 3387 1.515081 TCGAAAACCACGGTGGAATC 58.485 50.000 32.72 22.91 40.96 2.52
3243 3388 2.194201 ATCGAAAACCACGGTGGAAT 57.806 45.000 32.72 17.97 40.96 3.01
3244 3389 1.970092 AATCGAAAACCACGGTGGAA 58.030 45.000 32.72 11.07 40.96 3.53
3245 3390 1.874872 GAAATCGAAAACCACGGTGGA 59.125 47.619 32.72 10.34 40.96 4.02
3246 3391 1.604755 TGAAATCGAAAACCACGGTGG 59.395 47.619 25.21 25.21 45.02 4.61
3247 3392 2.289547 ACTGAAATCGAAAACCACGGTG 59.710 45.455 0.00 0.00 0.00 4.94
3248 3393 2.567985 ACTGAAATCGAAAACCACGGT 58.432 42.857 0.00 0.00 0.00 4.83
3249 3394 3.619233 AACTGAAATCGAAAACCACGG 57.381 42.857 0.00 0.00 0.00 4.94
3250 3395 4.593157 TGAAACTGAAATCGAAAACCACG 58.407 39.130 0.00 0.00 0.00 4.94
3251 3396 8.568732 TTTATGAAACTGAAATCGAAAACCAC 57.431 30.769 0.00 0.00 0.00 4.16
3252 3397 9.243637 CTTTTATGAAACTGAAATCGAAAACCA 57.756 29.630 0.00 0.00 0.00 3.67
3253 3398 9.244799 ACTTTTATGAAACTGAAATCGAAAACC 57.755 29.630 0.00 0.00 0.00 3.27
3258 3403 9.663904 CTGAAACTTTTATGAAACTGAAATCGA 57.336 29.630 0.00 0.00 0.00 3.59
3259 3404 8.420189 GCTGAAACTTTTATGAAACTGAAATCG 58.580 33.333 0.00 0.00 0.00 3.34
3260 3405 9.248291 TGCTGAAACTTTTATGAAACTGAAATC 57.752 29.630 0.00 0.00 0.00 2.17
3261 3406 9.034544 GTGCTGAAACTTTTATGAAACTGAAAT 57.965 29.630 0.00 0.00 0.00 2.17
3262 3407 7.491048 GGTGCTGAAACTTTTATGAAACTGAAA 59.509 33.333 0.00 0.00 0.00 2.69
3263 3408 6.978080 GGTGCTGAAACTTTTATGAAACTGAA 59.022 34.615 0.00 0.00 0.00 3.02
3264 3409 6.096141 TGGTGCTGAAACTTTTATGAAACTGA 59.904 34.615 0.00 0.00 0.00 3.41
3265 3410 6.272318 TGGTGCTGAAACTTTTATGAAACTG 58.728 36.000 0.00 0.00 0.00 3.16
3266 3411 6.463995 TGGTGCTGAAACTTTTATGAAACT 57.536 33.333 0.00 0.00 0.00 2.66
3267 3412 6.019075 GGTTGGTGCTGAAACTTTTATGAAAC 60.019 38.462 0.00 0.00 0.00 2.78
3268 3413 6.045955 GGTTGGTGCTGAAACTTTTATGAAA 58.954 36.000 0.00 0.00 0.00 2.69
3269 3414 5.596845 GGTTGGTGCTGAAACTTTTATGAA 58.403 37.500 0.00 0.00 0.00 2.57
3270 3415 4.261405 CGGTTGGTGCTGAAACTTTTATGA 60.261 41.667 0.00 0.00 0.00 2.15
3271 3416 3.980775 CGGTTGGTGCTGAAACTTTTATG 59.019 43.478 0.00 0.00 0.00 1.90
3272 3417 3.886505 TCGGTTGGTGCTGAAACTTTTAT 59.113 39.130 0.00 0.00 0.00 1.40
3273 3418 3.280295 TCGGTTGGTGCTGAAACTTTTA 58.720 40.909 0.00 0.00 0.00 1.52
3274 3419 2.096248 TCGGTTGGTGCTGAAACTTTT 58.904 42.857 0.00 0.00 0.00 2.27
3275 3420 1.757682 TCGGTTGGTGCTGAAACTTT 58.242 45.000 0.00 0.00 0.00 2.66
3276 3421 1.757682 TTCGGTTGGTGCTGAAACTT 58.242 45.000 0.00 0.00 31.49 2.66
3277 3422 1.757682 TTTCGGTTGGTGCTGAAACT 58.242 45.000 0.00 0.00 38.41 2.66
3278 3423 2.034053 TGATTTCGGTTGGTGCTGAAAC 59.966 45.455 2.67 0.00 43.78 2.78
3279 3424 2.034053 GTGATTTCGGTTGGTGCTGAAA 59.966 45.455 3.06 3.06 44.68 2.69
3280 3425 1.606668 GTGATTTCGGTTGGTGCTGAA 59.393 47.619 0.00 0.00 32.46 3.02
3281 3426 1.234821 GTGATTTCGGTTGGTGCTGA 58.765 50.000 0.00 0.00 0.00 4.26
3282 3427 0.240945 GGTGATTTCGGTTGGTGCTG 59.759 55.000 0.00 0.00 0.00 4.41
3283 3428 1.234615 CGGTGATTTCGGTTGGTGCT 61.235 55.000 0.00 0.00 0.00 4.40
3284 3429 1.209127 CGGTGATTTCGGTTGGTGC 59.791 57.895 0.00 0.00 0.00 5.01
3285 3430 1.231221 TTCGGTGATTTCGGTTGGTG 58.769 50.000 0.00 0.00 0.00 4.17
3286 3431 1.970092 TTTCGGTGATTTCGGTTGGT 58.030 45.000 0.00 0.00 0.00 3.67
3287 3432 3.057876 TGAATTTCGGTGATTTCGGTTGG 60.058 43.478 0.00 0.00 0.00 3.77
3288 3433 4.153958 TGAATTTCGGTGATTTCGGTTG 57.846 40.909 0.00 0.00 0.00 3.77
3289 3434 3.818773 ACTGAATTTCGGTGATTTCGGTT 59.181 39.130 10.08 0.00 34.08 4.44
3290 3435 3.408634 ACTGAATTTCGGTGATTTCGGT 58.591 40.909 10.08 0.00 34.08 4.69
3304 3449 7.086376 CCGAAATCACTGAAATTCACTGAATT 58.914 34.615 10.71 10.71 43.07 2.17
3305 3450 6.207417 ACCGAAATCACTGAAATTCACTGAAT 59.793 34.615 8.87 0.00 33.25 2.57
3306 3451 5.530915 ACCGAAATCACTGAAATTCACTGAA 59.469 36.000 8.87 0.00 0.00 3.02
3307 3452 5.063204 ACCGAAATCACTGAAATTCACTGA 58.937 37.500 7.57 7.57 0.00 3.41
3308 3453 5.362556 ACCGAAATCACTGAAATTCACTG 57.637 39.130 0.00 0.00 0.00 3.66
3309 3454 6.208644 CAAACCGAAATCACTGAAATTCACT 58.791 36.000 0.00 0.00 0.00 3.41
3310 3455 5.107875 GCAAACCGAAATCACTGAAATTCAC 60.108 40.000 0.00 0.00 0.00 3.18
3311 3456 4.981674 GCAAACCGAAATCACTGAAATTCA 59.018 37.500 0.00 0.00 0.00 2.57
3312 3457 4.088496 CGCAAACCGAAATCACTGAAATTC 59.912 41.667 0.00 0.00 40.02 2.17
3313 3458 3.980775 CGCAAACCGAAATCACTGAAATT 59.019 39.130 0.00 0.00 40.02 1.82
3314 3459 3.004315 ACGCAAACCGAAATCACTGAAAT 59.996 39.130 0.00 0.00 41.02 2.17
3315 3460 2.356382 ACGCAAACCGAAATCACTGAAA 59.644 40.909 0.00 0.00 41.02 2.69
3316 3461 1.944024 ACGCAAACCGAAATCACTGAA 59.056 42.857 0.00 0.00 41.02 3.02
3317 3462 1.588674 ACGCAAACCGAAATCACTGA 58.411 45.000 0.00 0.00 41.02 3.41
3318 3463 2.399396 AACGCAAACCGAAATCACTG 57.601 45.000 0.00 0.00 41.02 3.66
3319 3464 2.601266 CGAAACGCAAACCGAAATCACT 60.601 45.455 0.00 0.00 41.02 3.41
3320 3465 1.706597 CGAAACGCAAACCGAAATCAC 59.293 47.619 0.00 0.00 41.02 3.06
3321 3466 1.334239 CCGAAACGCAAACCGAAATCA 60.334 47.619 0.00 0.00 41.02 2.57
3322 3467 1.323791 CCGAAACGCAAACCGAAATC 58.676 50.000 0.00 0.00 41.02 2.17
3323 3468 0.662077 GCCGAAACGCAAACCGAAAT 60.662 50.000 0.00 0.00 41.02 2.17
3324 3469 1.298488 GCCGAAACGCAAACCGAAA 60.298 52.632 0.00 0.00 41.02 3.46
3325 3470 2.328639 GCCGAAACGCAAACCGAA 59.671 55.556 0.00 0.00 41.02 4.30
3326 3471 3.652000 GGCCGAAACGCAAACCGA 61.652 61.111 0.00 0.00 41.02 4.69
3328 3473 4.693525 CCGGCCGAAACGCAAACC 62.694 66.667 30.73 0.00 0.00 3.27
3329 3474 4.693525 CCCGGCCGAAACGCAAAC 62.694 66.667 30.73 0.00 0.00 2.93
3341 3486 1.111277 AGTGAATATTTTGGCCCGGC 58.889 50.000 0.00 0.00 0.00 6.13
3342 3487 2.757868 TCAAGTGAATATTTTGGCCCGG 59.242 45.455 0.00 0.00 0.00 5.73
3343 3488 4.448537 TTCAAGTGAATATTTTGGCCCG 57.551 40.909 0.00 0.00 0.00 6.13
3344 3489 6.405538 TGAATTCAAGTGAATATTTTGGCCC 58.594 36.000 5.45 0.00 43.41 5.80
3345 3490 7.903995 TTGAATTCAAGTGAATATTTTGGCC 57.096 32.000 16.91 0.00 43.41 5.36
3398 3543 8.289618 GCAATTTCAGTAGTACACAAGAATTCA 58.710 33.333 8.44 0.00 0.00 2.57
3399 3544 8.507249 AGCAATTTCAGTAGTACACAAGAATTC 58.493 33.333 2.52 0.00 0.00 2.17
3400 3545 8.396272 AGCAATTTCAGTAGTACACAAGAATT 57.604 30.769 2.52 0.00 0.00 2.17
3401 3546 7.986085 AGCAATTTCAGTAGTACACAAGAAT 57.014 32.000 2.52 0.00 0.00 2.40
3402 3547 8.896320 TTAGCAATTTCAGTAGTACACAAGAA 57.104 30.769 2.52 0.00 0.00 2.52
3411 3556 8.197439 GGCCAAAATATTAGCAATTTCAGTAGT 58.803 33.333 0.00 0.00 0.00 2.73
3412 3557 8.196771 TGGCCAAAATATTAGCAATTTCAGTAG 58.803 33.333 0.61 0.00 0.00 2.57
3413 3558 8.072321 TGGCCAAAATATTAGCAATTTCAGTA 57.928 30.769 0.61 0.00 0.00 2.74
3414 3559 6.945218 TGGCCAAAATATTAGCAATTTCAGT 58.055 32.000 0.61 0.00 0.00 3.41
3415 3560 7.267128 TCTGGCCAAAATATTAGCAATTTCAG 58.733 34.615 7.01 5.28 0.00 3.02
3416 3561 7.180322 TCTGGCCAAAATATTAGCAATTTCA 57.820 32.000 7.01 0.00 0.00 2.69
3417 3562 7.548780 TGTTCTGGCCAAAATATTAGCAATTTC 59.451 33.333 7.01 0.00 0.00 2.17
3418 3563 7.393216 TGTTCTGGCCAAAATATTAGCAATTT 58.607 30.769 7.01 0.00 0.00 1.82
3419 3564 6.945218 TGTTCTGGCCAAAATATTAGCAATT 58.055 32.000 7.01 0.00 0.00 2.32
3420 3565 6.543430 TGTTCTGGCCAAAATATTAGCAAT 57.457 33.333 7.01 0.00 0.00 3.56
3421 3566 5.991933 TGTTCTGGCCAAAATATTAGCAA 57.008 34.783 7.01 0.00 0.00 3.91
3422 3567 6.605194 TGTATGTTCTGGCCAAAATATTAGCA 59.395 34.615 7.01 1.72 0.00 3.49
3423 3568 7.038154 TGTATGTTCTGGCCAAAATATTAGC 57.962 36.000 7.01 0.00 0.00 3.09
3428 3573 9.194972 TGAAATATGTATGTTCTGGCCAAAATA 57.805 29.630 7.01 0.00 0.00 1.40
3429 3574 8.076910 TGAAATATGTATGTTCTGGCCAAAAT 57.923 30.769 7.01 0.00 0.00 1.82
3430 3575 7.178274 ACTGAAATATGTATGTTCTGGCCAAAA 59.822 33.333 7.01 0.00 0.00 2.44
3431 3576 6.663093 ACTGAAATATGTATGTTCTGGCCAAA 59.337 34.615 7.01 1.05 0.00 3.28
3432 3577 6.095300 CACTGAAATATGTATGTTCTGGCCAA 59.905 38.462 7.01 0.00 0.00 4.52
3433 3578 5.589855 CACTGAAATATGTATGTTCTGGCCA 59.410 40.000 4.71 4.71 0.00 5.36
3434 3579 5.506317 GCACTGAAATATGTATGTTCTGGCC 60.506 44.000 0.00 0.00 0.00 5.36
3435 3580 5.506317 GGCACTGAAATATGTATGTTCTGGC 60.506 44.000 0.00 0.00 0.00 4.85
3436 3581 5.589855 TGGCACTGAAATATGTATGTTCTGG 59.410 40.000 0.00 0.00 0.00 3.86
3437 3582 6.682423 TGGCACTGAAATATGTATGTTCTG 57.318 37.500 0.00 0.00 0.00 3.02
3438 3583 5.297776 GCTGGCACTGAAATATGTATGTTCT 59.702 40.000 0.00 0.00 0.00 3.01
3439 3584 5.297776 AGCTGGCACTGAAATATGTATGTTC 59.702 40.000 0.00 0.00 0.00 3.18
3440 3585 5.066893 CAGCTGGCACTGAAATATGTATGTT 59.933 40.000 5.57 0.00 40.25 2.71
3441 3586 4.577693 CAGCTGGCACTGAAATATGTATGT 59.422 41.667 5.57 0.00 40.25 2.29
3442 3587 4.818005 TCAGCTGGCACTGAAATATGTATG 59.182 41.667 15.13 0.00 43.59 2.39
3443 3588 5.039920 TCAGCTGGCACTGAAATATGTAT 57.960 39.130 15.13 0.00 43.59 2.29
3444 3589 4.486125 TCAGCTGGCACTGAAATATGTA 57.514 40.909 15.13 0.00 43.59 2.29
3445 3590 3.354948 TCAGCTGGCACTGAAATATGT 57.645 42.857 15.13 0.00 43.59 2.29
3453 3598 2.490509 TGAAATTCATCAGCTGGCACTG 59.509 45.455 15.13 6.99 39.12 3.66
3454 3599 2.799017 TGAAATTCATCAGCTGGCACT 58.201 42.857 15.13 0.00 0.00 4.40
3455 3600 3.795623 ATGAAATTCATCAGCTGGCAC 57.204 42.857 15.13 0.00 29.59 5.01
3466 3611 9.687210 CTTTCAGTGAGATTTTGATGAAATTCA 57.313 29.630 0.00 0.00 38.06 2.57
3467 3612 9.688592 ACTTTCAGTGAGATTTTGATGAAATTC 57.311 29.630 0.00 0.00 38.06 2.17
3485 3630 5.279156 GGAATTCATGGCTTTCACTTTCAGT 60.279 40.000 7.93 0.00 0.00 3.41
3486 3631 5.166398 GGAATTCATGGCTTTCACTTTCAG 58.834 41.667 7.93 0.00 0.00 3.02
3487 3632 4.588106 TGGAATTCATGGCTTTCACTTTCA 59.412 37.500 7.93 0.00 0.00 2.69
3488 3633 4.925646 GTGGAATTCATGGCTTTCACTTTC 59.074 41.667 7.93 0.00 0.00 2.62
3489 3634 4.262592 GGTGGAATTCATGGCTTTCACTTT 60.263 41.667 7.93 0.00 0.00 2.66
3490 3635 3.259123 GGTGGAATTCATGGCTTTCACTT 59.741 43.478 7.93 0.00 0.00 3.16
3491 3636 2.827921 GGTGGAATTCATGGCTTTCACT 59.172 45.455 7.93 0.00 0.00 3.41
3492 3637 2.562298 TGGTGGAATTCATGGCTTTCAC 59.438 45.455 7.93 9.78 0.00 3.18
3493 3638 2.886913 TGGTGGAATTCATGGCTTTCA 58.113 42.857 7.93 0.00 0.00 2.69
3494 3639 3.959535 TTGGTGGAATTCATGGCTTTC 57.040 42.857 7.93 0.00 0.00 2.62
3495 3640 4.210724 CATTGGTGGAATTCATGGCTTT 57.789 40.909 7.93 0.00 0.00 3.51
3496 3641 3.899052 CATTGGTGGAATTCATGGCTT 57.101 42.857 7.93 0.00 0.00 4.35
3514 3659 9.732130 GAGCTGAGATTAACCTATTTTATCCAT 57.268 33.333 0.00 0.00 0.00 3.41
3515 3660 8.713971 TGAGCTGAGATTAACCTATTTTATCCA 58.286 33.333 0.00 0.00 0.00 3.41
3516 3661 9.732130 ATGAGCTGAGATTAACCTATTTTATCC 57.268 33.333 0.00 0.00 0.00 2.59
3534 3679 4.375272 GCTACATGCTAGAAATGAGCTGA 58.625 43.478 11.59 0.00 40.76 4.26
3535 3680 4.728917 GCTACATGCTAGAAATGAGCTG 57.271 45.455 11.59 0.00 40.76 4.24
3562 3711 7.872993 CGTTTCTGTGTGTTATATGGAGGATAT 59.127 37.037 0.00 0.00 0.00 1.63
3571 3720 5.579511 GGTGTAGCGTTTCTGTGTGTTATAT 59.420 40.000 0.00 0.00 0.00 0.86
3572 3721 4.925054 GGTGTAGCGTTTCTGTGTGTTATA 59.075 41.667 0.00 0.00 0.00 0.98
3583 3764 1.369625 CCATCTGGGTGTAGCGTTTC 58.630 55.000 0.00 0.00 0.00 2.78
3600 3781 5.369699 CCCTGAATCTATCTTTAAGGTCCCA 59.630 44.000 0.00 0.00 0.00 4.37
3602 3783 6.749036 TCCCTGAATCTATCTTTAAGGTCC 57.251 41.667 0.00 0.00 0.00 4.46
3609 3790 7.446625 GCATTGTGTATCCCTGAATCTATCTTT 59.553 37.037 0.00 0.00 0.00 2.52
3622 3803 1.832883 TGGTGTGCATTGTGTATCCC 58.167 50.000 0.00 0.00 0.00 3.85
3641 3822 7.012327 CGAGGTGTTTATTGTGTTCATATCCAT 59.988 37.037 0.00 0.00 0.00 3.41
3719 3900 0.318107 GCTTCTGCACGCACATTTGT 60.318 50.000 0.00 0.00 39.41 2.83
3731 3912 1.872313 GTCATAGGCTCATGCTTCTGC 59.128 52.381 0.00 0.00 39.59 4.26
3790 3976 0.178932 ACCTGCTGTACCCTCTGACA 60.179 55.000 0.00 0.00 0.00 3.58
3943 4129 1.302192 GTGCCTGGGCGTGTTCTTA 60.302 57.895 7.14 0.00 45.51 2.10
3991 4177 1.689959 GACAAATTCGCTTGCAGGTG 58.310 50.000 2.41 2.41 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.