Multiple sequence alignment - TraesCS3A01G127800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G127800 chr3A 100.000 4827 0 0 1 4827 104413814 104418640 0.000000e+00 8914.0
1 TraesCS3A01G127800 chr3B 94.317 3871 133 36 327 4168 137321728 137325540 0.000000e+00 5849.0
2 TraesCS3A01G127800 chr3B 80.315 254 11 10 4199 4421 137325600 137325845 6.470000e-34 156.0
3 TraesCS3A01G127800 chr3B 90.385 104 5 2 4175 4278 137325502 137325600 1.090000e-26 132.0
4 TraesCS3A01G127800 chr3D 94.400 2750 82 20 327 3054 87922976 87925675 0.000000e+00 4159.0
5 TraesCS3A01G127800 chr3D 91.203 1455 62 21 3284 4703 87926160 87927583 0.000000e+00 1917.0
6 TraesCS3A01G127800 chr3D 96.154 182 6 1 3051 3232 87925796 87925976 3.650000e-76 296.0
7 TraesCS3A01G127800 chr3D 93.035 201 13 1 2555 2755 16171631 16171830 4.730000e-75 292.0
8 TraesCS3A01G127800 chr3D 92.708 96 7 0 196 291 488120899 488120994 6.510000e-29 139.0
9 TraesCS3A01G127800 chr3D 91.667 96 8 0 196 291 528115388 528115483 3.030000e-27 134.0
10 TraesCS3A01G127800 chr3D 91.667 96 8 0 196 291 590751756 590751851 3.030000e-27 134.0
11 TraesCS3A01G127800 chr3D 81.169 154 24 5 13 163 487583669 487583820 8.490000e-23 119.0
12 TraesCS3A01G127800 chr3D 82.114 123 22 0 30 152 105272310 105272188 6.610000e-19 106.0
13 TraesCS3A01G127800 chr3D 79.286 140 29 0 12 151 471592284 471592145 1.110000e-16 99.0
14 TraesCS3A01G127800 chr7B 91.584 202 17 0 2557 2758 350930391 350930592 3.680000e-71 279.0
15 TraesCS3A01G127800 chr7B 92.708 96 7 0 196 291 527044823 527044728 6.510000e-29 139.0
16 TraesCS3A01G127800 chr4D 93.750 96 6 0 196 291 226384950 226385045 1.400000e-30 145.0
17 TraesCS3A01G127800 chr1B 92.708 96 7 0 196 291 682021362 682021457 6.510000e-29 139.0
18 TraesCS3A01G127800 chr4B 92.708 96 6 1 196 291 181683260 181683166 2.340000e-28 137.0
19 TraesCS3A01G127800 chr6D 91.667 96 8 0 196 291 12058493 12058588 3.030000e-27 134.0
20 TraesCS3A01G127800 chr6B 91.667 96 8 0 196 291 116333872 116333967 3.030000e-27 134.0
21 TraesCS3A01G127800 chr5A 83.333 144 23 1 16 158 648659076 648659219 1.090000e-26 132.0
22 TraesCS3A01G127800 chr5A 83.929 112 18 0 18 129 608853516 608853405 1.840000e-19 108.0
23 TraesCS3A01G127800 chr5A 97.059 34 1 0 586 619 707822518 707822551 1.880000e-04 58.4
24 TraesCS3A01G127800 chr6A 80.142 141 27 1 13 152 533265300 533265440 2.380000e-18 104.0
25 TraesCS3A01G127800 chr7D 78.710 155 29 4 12 163 623843824 623843671 3.070000e-17 100.0
26 TraesCS3A01G127800 chr5D 79.310 145 26 4 16 157 263162848 263162991 1.110000e-16 99.0
27 TraesCS3A01G127800 chr5B 78.378 148 28 4 12 157 427841933 427842078 5.140000e-15 93.5
28 TraesCS3A01G127800 chr2B 77.922 154 30 4 12 163 84966524 84966675 5.140000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G127800 chr3A 104413814 104418640 4826 False 8914.000000 8914 100.000 1 4827 1 chr3A.!!$F1 4826
1 TraesCS3A01G127800 chr3B 137321728 137325845 4117 False 2045.666667 5849 88.339 327 4421 3 chr3B.!!$F1 4094
2 TraesCS3A01G127800 chr3D 87922976 87927583 4607 False 2124.000000 4159 93.919 327 4703 3 chr3D.!!$F6 4376

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
232 233 0.179100 AGACGCAAGCGCTCATACAT 60.179 50.0 12.06 0.00 44.19 2.29 F
271 272 0.250081 TATGAACGCACACAGGCACA 60.250 50.0 0.00 0.00 0.00 4.57 F
466 467 0.317436 GGACGATACGAGCTCAGCAG 60.317 60.0 15.40 0.00 0.00 4.24 F
591 598 0.396974 CACCTCCTCTCTCCTCCCTG 60.397 65.0 0.00 0.00 0.00 4.45 F
835 859 0.676782 CCTTTCCGCCGTCCAAATCT 60.677 55.0 0.00 0.00 0.00 2.40 F
1082 1107 0.719465 CCCTCGTTCGTTTGATTCGG 59.281 55.0 0.00 0.00 0.00 4.30 F
2882 2914 0.748450 ATTTCCCCAAGATGCGCATG 59.252 50.0 30.76 15.73 0.00 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1047 1071 0.037303 AGGGGCACAATCAGTCACAG 59.963 55.000 0.00 0.00 0.00 3.66 R
1336 1361 0.386985 GAACAGACAGGTCGTCCGTC 60.387 60.000 12.85 12.85 46.69 4.79 R
2390 2422 0.105039 CCCAGCGGAGTCCATTCTAC 59.895 60.000 10.49 0.00 0.00 2.59 R
2510 2542 2.161855 CCATGAGCAAAGCAAGTACCA 58.838 47.619 0.00 0.00 0.00 3.25 R
2755 2787 5.047092 ACCTTTTCCATGACAAAGCATAAGG 60.047 40.000 9.85 0.00 36.78 2.69 R
3059 3216 3.006537 GGTTAAAAGGGGAAAGGAACTGC 59.993 47.826 0.00 0.00 40.86 4.40 R
4624 5059 0.035343 GGTTGGAGGAACTACCCTGC 60.035 60.000 0.00 0.00 39.75 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.779759 CGCATCTAGAAGCCTCATATCC 58.220 50.000 14.00 0.00 0.00 2.59
22 23 3.733380 CGCATCTAGAAGCCTCATATCCG 60.733 52.174 14.00 0.00 0.00 4.18
23 24 3.779759 CATCTAGAAGCCTCATATCCGC 58.220 50.000 0.00 0.00 0.00 5.54
24 25 2.171840 TCTAGAAGCCTCATATCCGCC 58.828 52.381 0.00 0.00 0.00 6.13
25 26 2.175202 CTAGAAGCCTCATATCCGCCT 58.825 52.381 0.00 0.00 0.00 5.52
26 27 1.428869 AGAAGCCTCATATCCGCCTT 58.571 50.000 0.00 0.00 0.00 4.35
27 28 2.609747 AGAAGCCTCATATCCGCCTTA 58.390 47.619 0.00 0.00 0.00 2.69
28 29 3.177228 AGAAGCCTCATATCCGCCTTAT 58.823 45.455 0.00 0.00 0.00 1.73
29 30 4.353777 AGAAGCCTCATATCCGCCTTATA 58.646 43.478 0.00 0.00 0.00 0.98
30 31 4.965532 AGAAGCCTCATATCCGCCTTATAT 59.034 41.667 0.00 0.00 0.00 0.86
31 32 5.426833 AGAAGCCTCATATCCGCCTTATATT 59.573 40.000 0.00 0.00 0.00 1.28
32 33 5.700402 AGCCTCATATCCGCCTTATATTT 57.300 39.130 0.00 0.00 0.00 1.40
33 34 5.431765 AGCCTCATATCCGCCTTATATTTG 58.568 41.667 0.00 0.00 0.00 2.32
34 35 4.576463 GCCTCATATCCGCCTTATATTTGG 59.424 45.833 0.00 0.00 0.00 3.28
35 36 5.126067 CCTCATATCCGCCTTATATTTGGG 58.874 45.833 0.00 0.00 0.00 4.12
36 37 5.339200 CCTCATATCCGCCTTATATTTGGGT 60.339 44.000 0.00 0.00 0.00 4.51
37 38 6.134535 TCATATCCGCCTTATATTTGGGTT 57.865 37.500 0.00 0.00 0.00 4.11
38 39 7.260387 TCATATCCGCCTTATATTTGGGTTA 57.740 36.000 0.00 0.00 0.00 2.85
39 40 7.335627 TCATATCCGCCTTATATTTGGGTTAG 58.664 38.462 0.00 0.00 0.00 2.34
40 41 5.836024 ATCCGCCTTATATTTGGGTTAGA 57.164 39.130 0.00 0.00 0.00 2.10
41 42 5.836024 TCCGCCTTATATTTGGGTTAGAT 57.164 39.130 0.00 0.00 0.00 1.98
42 43 6.938698 TCCGCCTTATATTTGGGTTAGATA 57.061 37.500 0.00 0.00 0.00 1.98
43 44 7.504926 TCCGCCTTATATTTGGGTTAGATAT 57.495 36.000 0.00 0.00 0.00 1.63
44 45 7.335627 TCCGCCTTATATTTGGGTTAGATATG 58.664 38.462 0.00 0.00 0.00 1.78
45 46 7.181305 TCCGCCTTATATTTGGGTTAGATATGA 59.819 37.037 0.00 0.00 0.00 2.15
46 47 7.495934 CCGCCTTATATTTGGGTTAGATATGAG 59.504 40.741 0.00 0.00 0.00 2.90
47 48 7.495934 CGCCTTATATTTGGGTTAGATATGAGG 59.504 40.741 8.31 8.31 40.12 3.86
48 49 7.775561 GCCTTATATTTGGGTTAGATATGAGGG 59.224 40.741 12.47 0.00 38.75 4.30
49 50 8.275040 CCTTATATTTGGGTTAGATATGAGGGG 58.725 40.741 0.00 0.00 36.56 4.79
50 51 8.766492 TTATATTTGGGTTAGATATGAGGGGT 57.234 34.615 0.00 0.00 0.00 4.95
51 52 4.788925 TTTGGGTTAGATATGAGGGGTG 57.211 45.455 0.00 0.00 0.00 4.61
52 53 3.431411 TGGGTTAGATATGAGGGGTGT 57.569 47.619 0.00 0.00 0.00 4.16
53 54 3.314693 TGGGTTAGATATGAGGGGTGTC 58.685 50.000 0.00 0.00 0.00 3.67
54 55 2.299297 GGGTTAGATATGAGGGGTGTCG 59.701 54.545 0.00 0.00 0.00 4.35
55 56 2.299297 GGTTAGATATGAGGGGTGTCGG 59.701 54.545 0.00 0.00 0.00 4.79
56 57 2.963782 GTTAGATATGAGGGGTGTCGGT 59.036 50.000 0.00 0.00 0.00 4.69
57 58 1.705873 AGATATGAGGGGTGTCGGTC 58.294 55.000 0.00 0.00 0.00 4.79
58 59 1.063190 AGATATGAGGGGTGTCGGTCA 60.063 52.381 0.00 0.00 0.00 4.02
59 60 1.341531 GATATGAGGGGTGTCGGTCAG 59.658 57.143 0.00 0.00 0.00 3.51
60 61 1.327690 TATGAGGGGTGTCGGTCAGC 61.328 60.000 0.00 0.00 43.02 4.26
76 77 2.750237 GCCCGGGCGTTTGAATCT 60.750 61.111 33.60 0.00 0.00 2.40
77 78 2.340328 GCCCGGGCGTTTGAATCTT 61.340 57.895 33.60 0.00 0.00 2.40
78 79 1.506262 CCCGGGCGTTTGAATCTTG 59.494 57.895 8.08 0.00 0.00 3.02
79 80 1.241315 CCCGGGCGTTTGAATCTTGT 61.241 55.000 8.08 0.00 0.00 3.16
80 81 0.596082 CCGGGCGTTTGAATCTTGTT 59.404 50.000 0.00 0.00 0.00 2.83
81 82 1.000717 CCGGGCGTTTGAATCTTGTTT 60.001 47.619 0.00 0.00 0.00 2.83
82 83 2.226912 CCGGGCGTTTGAATCTTGTTTA 59.773 45.455 0.00 0.00 0.00 2.01
83 84 3.304794 CCGGGCGTTTGAATCTTGTTTAA 60.305 43.478 0.00 0.00 0.00 1.52
84 85 3.911964 CGGGCGTTTGAATCTTGTTTAAG 59.088 43.478 0.00 0.00 35.16 1.85
85 86 4.319911 CGGGCGTTTGAATCTTGTTTAAGA 60.320 41.667 0.00 0.00 46.32 2.10
86 87 5.525199 GGGCGTTTGAATCTTGTTTAAGAA 58.475 37.500 0.00 0.00 45.47 2.52
87 88 5.629435 GGGCGTTTGAATCTTGTTTAAGAAG 59.371 40.000 0.00 0.00 45.47 2.85
88 89 5.117135 GGCGTTTGAATCTTGTTTAAGAAGC 59.883 40.000 0.00 0.00 45.47 3.86
89 90 5.117135 GCGTTTGAATCTTGTTTAAGAAGCC 59.883 40.000 0.00 0.00 45.47 4.35
90 91 5.629435 CGTTTGAATCTTGTTTAAGAAGCCC 59.371 40.000 0.00 0.00 45.47 5.19
91 92 5.371115 TTGAATCTTGTTTAAGAAGCCCG 57.629 39.130 0.00 0.00 45.47 6.13
92 93 4.394729 TGAATCTTGTTTAAGAAGCCCGT 58.605 39.130 0.00 0.00 45.47 5.28
93 94 4.825085 TGAATCTTGTTTAAGAAGCCCGTT 59.175 37.500 0.00 0.00 45.47 4.44
94 95 5.300792 TGAATCTTGTTTAAGAAGCCCGTTT 59.699 36.000 0.00 0.00 45.47 3.60
95 96 6.487331 TGAATCTTGTTTAAGAAGCCCGTTTA 59.513 34.615 0.00 0.00 45.47 2.01
96 97 5.934935 TCTTGTTTAAGAAGCCCGTTTAG 57.065 39.130 0.00 0.00 39.89 1.85
97 98 4.758165 TCTTGTTTAAGAAGCCCGTTTAGG 59.242 41.667 0.00 0.00 39.89 2.69
98 99 4.089408 TGTTTAAGAAGCCCGTTTAGGT 57.911 40.909 0.00 0.00 38.74 3.08
99 100 4.067192 TGTTTAAGAAGCCCGTTTAGGTC 58.933 43.478 0.00 0.00 38.74 3.85
100 101 2.660189 TAAGAAGCCCGTTTAGGTCG 57.340 50.000 0.00 0.00 38.74 4.79
101 102 0.971386 AAGAAGCCCGTTTAGGTCGA 59.029 50.000 0.00 0.00 38.74 4.20
102 103 0.971386 AGAAGCCCGTTTAGGTCGAA 59.029 50.000 0.00 0.00 38.74 3.71
103 104 1.553704 AGAAGCCCGTTTAGGTCGAAT 59.446 47.619 0.00 0.00 38.74 3.34
104 105 2.027469 AGAAGCCCGTTTAGGTCGAATT 60.027 45.455 0.00 0.00 38.74 2.17
105 106 2.484742 AGCCCGTTTAGGTCGAATTT 57.515 45.000 0.00 0.00 38.74 1.82
106 107 2.786777 AGCCCGTTTAGGTCGAATTTT 58.213 42.857 0.00 0.00 38.74 1.82
107 108 2.745821 AGCCCGTTTAGGTCGAATTTTC 59.254 45.455 0.00 0.00 38.74 2.29
108 109 2.475022 GCCCGTTTAGGTCGAATTTTCG 60.475 50.000 6.37 6.37 43.90 3.46
109 110 2.738314 CCCGTTTAGGTCGAATTTTCGT 59.262 45.455 12.00 0.00 43.41 3.85
110 111 3.423907 CCCGTTTAGGTCGAATTTTCGTG 60.424 47.826 12.00 0.00 43.41 4.35
111 112 5.615058 CCCGTTTAGGTCGAATTTTCGTGA 61.615 45.833 12.00 0.00 43.41 4.35
112 113 7.568938 CCCGTTTAGGTCGAATTTTCGTGAC 62.569 48.000 12.00 4.62 43.41 3.67
114 115 1.425412 AGGTCGAATTTTCGTGACCG 58.575 50.000 12.00 0.00 46.25 4.79
115 116 1.938016 AGGTCGAATTTTCGTGACCGG 60.938 52.381 12.00 0.00 46.25 5.28
116 117 4.737601 CGAATTTTCGTGACCGGC 57.262 55.556 0.00 0.00 45.09 6.13
117 118 1.133869 CGAATTTTCGTGACCGGCC 59.866 57.895 0.00 0.00 45.09 6.13
118 119 1.133869 GAATTTTCGTGACCGGCCG 59.866 57.895 21.04 21.04 33.95 6.13
119 120 2.248274 GAATTTTCGTGACCGGCCGG 62.248 60.000 42.17 42.17 42.03 6.13
134 135 4.838152 CGGTGACCGGGCCATCTG 62.838 72.222 17.80 0.00 44.15 2.90
145 146 2.046314 CCATCTGGCCGGACGTTT 60.046 61.111 18.90 0.00 0.00 3.60
146 147 2.398554 CCATCTGGCCGGACGTTTG 61.399 63.158 18.90 11.40 0.00 2.93
147 148 1.375396 CATCTGGCCGGACGTTTGA 60.375 57.895 18.90 0.00 0.00 2.69
148 149 1.079127 ATCTGGCCGGACGTTTGAG 60.079 57.895 18.90 0.00 0.00 3.02
149 150 2.521958 ATCTGGCCGGACGTTTGAGG 62.522 60.000 18.90 0.00 0.00 3.86
153 154 4.675029 CCGGACGTTTGAGGCGGT 62.675 66.667 0.00 0.00 0.00 5.68
154 155 2.663852 CGGACGTTTGAGGCGGTT 60.664 61.111 0.00 0.00 0.00 4.44
155 156 2.248835 CGGACGTTTGAGGCGGTTT 61.249 57.895 0.00 0.00 0.00 3.27
156 157 1.281656 GGACGTTTGAGGCGGTTTG 59.718 57.895 0.00 0.00 0.00 2.93
157 158 1.281656 GACGTTTGAGGCGGTTTGG 59.718 57.895 0.00 0.00 0.00 3.28
158 159 2.125202 GACGTTTGAGGCGGTTTGGG 62.125 60.000 0.00 0.00 0.00 4.12
159 160 2.338620 GTTTGAGGCGGTTTGGGC 59.661 61.111 0.00 0.00 0.00 5.36
160 161 3.291383 TTTGAGGCGGTTTGGGCG 61.291 61.111 0.00 0.00 37.59 6.13
169 170 4.179579 GTTTGGGCGCCGATGCTC 62.180 66.667 22.54 5.65 35.30 4.26
170 171 4.408821 TTTGGGCGCCGATGCTCT 62.409 61.111 22.54 0.00 35.92 4.09
171 172 3.918253 TTTGGGCGCCGATGCTCTT 62.918 57.895 22.54 0.00 35.92 2.85
172 173 2.529454 TTTGGGCGCCGATGCTCTTA 62.529 55.000 22.54 0.00 35.92 2.10
173 174 2.663188 GGGCGCCGATGCTCTTAG 60.663 66.667 22.54 0.00 34.43 2.18
174 175 2.107141 GGCGCCGATGCTCTTAGT 59.893 61.111 12.58 0.00 34.43 2.24
175 176 1.951631 GGCGCCGATGCTCTTAGTC 60.952 63.158 12.58 0.00 34.43 2.59
176 177 1.226974 GCGCCGATGCTCTTAGTCA 60.227 57.895 0.00 0.00 34.43 3.41
177 178 0.598680 GCGCCGATGCTCTTAGTCAT 60.599 55.000 0.00 0.00 34.43 3.06
178 179 1.335964 GCGCCGATGCTCTTAGTCATA 60.336 52.381 0.00 0.00 34.43 2.15
179 180 2.862530 GCGCCGATGCTCTTAGTCATAA 60.863 50.000 0.00 0.00 34.43 1.90
180 181 3.381045 CGCCGATGCTCTTAGTCATAAA 58.619 45.455 0.00 0.00 34.43 1.40
181 182 3.990469 CGCCGATGCTCTTAGTCATAAAT 59.010 43.478 0.00 0.00 34.43 1.40
182 183 4.143242 CGCCGATGCTCTTAGTCATAAATG 60.143 45.833 0.00 0.00 34.43 2.32
183 184 4.991056 GCCGATGCTCTTAGTCATAAATGA 59.009 41.667 0.00 0.00 33.53 2.57
184 185 5.119898 GCCGATGCTCTTAGTCATAAATGAG 59.880 44.000 0.00 0.00 34.00 2.90
185 186 5.119898 CCGATGCTCTTAGTCATAAATGAGC 59.880 44.000 0.00 0.00 44.77 4.26
188 189 5.321983 GCTCTTAGTCATAAATGAGCACG 57.678 43.478 0.00 0.00 44.19 5.34
189 190 5.043903 GCTCTTAGTCATAAATGAGCACGA 58.956 41.667 0.00 0.00 44.19 4.35
190 191 5.694006 GCTCTTAGTCATAAATGAGCACGAT 59.306 40.000 0.00 0.00 44.19 3.73
191 192 6.863645 GCTCTTAGTCATAAATGAGCACGATA 59.136 38.462 0.00 0.00 44.19 2.92
192 193 7.543868 GCTCTTAGTCATAAATGAGCACGATAT 59.456 37.037 0.00 0.00 44.19 1.63
218 219 4.725556 TTTTGAACATCAGTACAGACGC 57.274 40.909 0.00 0.00 0.00 5.19
219 220 3.378911 TTGAACATCAGTACAGACGCA 57.621 42.857 0.00 0.00 0.00 5.24
220 221 3.378911 TGAACATCAGTACAGACGCAA 57.621 42.857 0.00 0.00 0.00 4.85
222 223 1.714794 ACATCAGTACAGACGCAAGC 58.285 50.000 0.00 0.00 45.62 4.01
223 224 0.642291 CATCAGTACAGACGCAAGCG 59.358 55.000 13.50 13.50 46.03 4.68
224 225 1.078759 ATCAGTACAGACGCAAGCGC 61.079 55.000 15.09 0.00 44.19 5.92
225 226 1.734477 CAGTACAGACGCAAGCGCT 60.734 57.895 15.09 2.64 44.19 5.92
226 227 1.444553 AGTACAGACGCAAGCGCTC 60.445 57.895 12.06 11.06 44.19 5.03
227 228 1.733041 GTACAGACGCAAGCGCTCA 60.733 57.895 12.06 0.83 44.19 4.26
228 229 1.078759 GTACAGACGCAAGCGCTCAT 61.079 55.000 12.06 0.00 44.19 2.90
229 230 0.454196 TACAGACGCAAGCGCTCATA 59.546 50.000 12.06 5.16 44.19 2.15
230 231 1.078759 ACAGACGCAAGCGCTCATAC 61.079 55.000 12.06 1.58 44.19 2.39
231 232 1.078201 CAGACGCAAGCGCTCATACA 61.078 55.000 12.06 0.00 44.19 2.29
232 233 0.179100 AGACGCAAGCGCTCATACAT 60.179 50.000 12.06 0.00 44.19 2.29
233 234 1.067060 AGACGCAAGCGCTCATACATA 59.933 47.619 12.06 0.00 44.19 2.29
234 235 1.190323 GACGCAAGCGCTCATACATAC 59.810 52.381 12.06 0.00 44.19 2.39
235 236 1.208259 CGCAAGCGCTCATACATACA 58.792 50.000 12.06 0.00 35.30 2.29
236 237 1.071239 CGCAAGCGCTCATACATACAC 60.071 52.381 12.06 0.00 35.30 2.90
237 238 1.071239 GCAAGCGCTCATACATACACG 60.071 52.381 12.06 0.00 34.30 4.49
238 239 1.071239 CAAGCGCTCATACATACACGC 60.071 52.381 12.06 0.00 46.20 5.34
239 240 2.588731 GCGCTCATACATACACGCA 58.411 52.632 0.00 0.00 45.25 5.24
240 241 1.139989 GCGCTCATACATACACGCAT 58.860 50.000 0.00 0.00 45.25 4.73
241 242 2.324860 GCGCTCATACATACACGCATA 58.675 47.619 0.00 0.00 45.25 3.14
242 243 2.090658 GCGCTCATACATACACGCATAC 59.909 50.000 0.00 0.00 45.25 2.39
243 244 3.305110 CGCTCATACATACACGCATACA 58.695 45.455 0.00 0.00 0.00 2.29
244 245 3.119628 CGCTCATACATACACGCATACAC 59.880 47.826 0.00 0.00 0.00 2.90
245 246 4.299155 GCTCATACATACACGCATACACT 58.701 43.478 0.00 0.00 0.00 3.55
246 247 4.383052 GCTCATACATACACGCATACACTC 59.617 45.833 0.00 0.00 0.00 3.51
247 248 5.508200 TCATACATACACGCATACACTCA 57.492 39.130 0.00 0.00 0.00 3.41
248 249 6.084326 TCATACATACACGCATACACTCAT 57.916 37.500 0.00 0.00 0.00 2.90
249 250 6.512297 TCATACATACACGCATACACTCATT 58.488 36.000 0.00 0.00 0.00 2.57
250 251 6.640907 TCATACATACACGCATACACTCATTC 59.359 38.462 0.00 0.00 0.00 2.67
251 252 4.119862 ACATACACGCATACACTCATTCC 58.880 43.478 0.00 0.00 0.00 3.01
252 253 4.141937 ACATACACGCATACACTCATTCCT 60.142 41.667 0.00 0.00 0.00 3.36
253 254 5.068591 ACATACACGCATACACTCATTCCTA 59.931 40.000 0.00 0.00 0.00 2.94
254 255 4.672587 ACACGCATACACTCATTCCTAT 57.327 40.909 0.00 0.00 0.00 2.57
255 256 4.371786 ACACGCATACACTCATTCCTATG 58.628 43.478 0.00 0.00 0.00 2.23
256 257 4.099419 ACACGCATACACTCATTCCTATGA 59.901 41.667 0.00 0.00 38.45 2.15
257 258 5.049828 CACGCATACACTCATTCCTATGAA 58.950 41.667 0.00 0.00 40.17 2.57
258 259 5.050490 ACGCATACACTCATTCCTATGAAC 58.950 41.667 0.00 0.00 40.17 3.18
259 260 4.148871 CGCATACACTCATTCCTATGAACG 59.851 45.833 0.00 0.00 40.17 3.95
260 261 4.084328 GCATACACTCATTCCTATGAACGC 60.084 45.833 0.00 0.00 40.17 4.84
261 262 3.610040 ACACTCATTCCTATGAACGCA 57.390 42.857 0.00 0.00 40.17 5.24
262 263 3.262420 ACACTCATTCCTATGAACGCAC 58.738 45.455 0.00 0.00 40.17 5.34
263 264 3.261580 CACTCATTCCTATGAACGCACA 58.738 45.455 0.00 0.00 40.17 4.57
264 265 3.062639 CACTCATTCCTATGAACGCACAC 59.937 47.826 0.00 0.00 40.17 3.82
265 266 3.261580 CTCATTCCTATGAACGCACACA 58.738 45.455 0.00 0.00 40.17 3.72
266 267 3.261580 TCATTCCTATGAACGCACACAG 58.738 45.455 0.00 0.00 37.83 3.66
267 268 2.093306 TTCCTATGAACGCACACAGG 57.907 50.000 1.05 1.05 0.00 4.00
268 269 0.391130 TCCTATGAACGCACACAGGC 60.391 55.000 2.44 0.00 0.00 4.85
269 270 0.673333 CCTATGAACGCACACAGGCA 60.673 55.000 0.00 0.00 0.00 4.75
270 271 0.443869 CTATGAACGCACACAGGCAC 59.556 55.000 0.00 0.00 0.00 5.01
271 272 0.250081 TATGAACGCACACAGGCACA 60.250 50.000 0.00 0.00 0.00 4.57
272 273 1.785041 ATGAACGCACACAGGCACAC 61.785 55.000 0.00 0.00 0.00 3.82
273 274 3.181169 GAACGCACACAGGCACACC 62.181 63.158 0.00 0.00 0.00 4.16
274 275 3.986072 AACGCACACAGGCACACCA 62.986 57.895 0.00 0.00 39.06 4.17
275 276 2.979676 CGCACACAGGCACACCAT 60.980 61.111 0.00 0.00 39.06 3.55
276 277 1.670730 CGCACACAGGCACACCATA 60.671 57.895 0.00 0.00 39.06 2.74
277 278 1.026182 CGCACACAGGCACACCATAT 61.026 55.000 0.00 0.00 39.06 1.78
278 279 0.734889 GCACACAGGCACACCATATC 59.265 55.000 0.00 0.00 39.06 1.63
279 280 1.382522 CACACAGGCACACCATATCC 58.617 55.000 0.00 0.00 39.06 2.59
280 281 1.065199 CACACAGGCACACCATATCCT 60.065 52.381 0.00 0.00 39.06 3.24
281 282 1.635487 ACACAGGCACACCATATCCTT 59.365 47.619 0.00 0.00 39.06 3.36
282 283 2.843730 ACACAGGCACACCATATCCTTA 59.156 45.455 0.00 0.00 39.06 2.69
283 284 3.459598 ACACAGGCACACCATATCCTTAT 59.540 43.478 0.00 0.00 39.06 1.73
284 285 3.817084 CACAGGCACACCATATCCTTATG 59.183 47.826 0.00 0.00 39.06 1.90
285 286 3.716353 ACAGGCACACCATATCCTTATGA 59.284 43.478 0.00 0.00 37.94 2.15
286 287 4.165950 ACAGGCACACCATATCCTTATGAA 59.834 41.667 0.00 0.00 37.94 2.57
287 288 4.516698 CAGGCACACCATATCCTTATGAAC 59.483 45.833 0.00 0.00 37.94 3.18
288 289 4.165950 AGGCACACCATATCCTTATGAACA 59.834 41.667 0.00 0.00 37.94 3.18
289 290 4.275936 GGCACACCATATCCTTATGAACAC 59.724 45.833 0.00 0.00 37.94 3.32
290 291 4.275936 GCACACCATATCCTTATGAACACC 59.724 45.833 0.00 0.00 37.94 4.16
291 292 5.436175 CACACCATATCCTTATGAACACCA 58.564 41.667 0.00 0.00 37.94 4.17
292 293 5.885352 CACACCATATCCTTATGAACACCAA 59.115 40.000 0.00 0.00 37.94 3.67
293 294 6.547141 CACACCATATCCTTATGAACACCAAT 59.453 38.462 0.00 0.00 37.94 3.16
294 295 7.719193 CACACCATATCCTTATGAACACCAATA 59.281 37.037 0.00 0.00 37.94 1.90
295 296 8.448008 ACACCATATCCTTATGAACACCAATAT 58.552 33.333 0.00 0.00 37.94 1.28
296 297 9.958180 CACCATATCCTTATGAACACCAATATA 57.042 33.333 0.00 0.00 37.94 0.86
308 309 8.287439 TGAACACCAATATAATTGTTACCTGG 57.713 34.615 0.00 0.00 32.34 4.45
309 310 8.110271 TGAACACCAATATAATTGTTACCTGGA 58.890 33.333 0.00 0.00 32.34 3.86
310 311 8.887264 AACACCAATATAATTGTTACCTGGAA 57.113 30.769 0.00 0.00 30.39 3.53
311 312 8.887264 ACACCAATATAATTGTTACCTGGAAA 57.113 30.769 0.00 0.00 0.00 3.13
312 313 9.315363 ACACCAATATAATTGTTACCTGGAAAA 57.685 29.630 0.00 0.00 0.00 2.29
385 386 2.281484 CACGTTCCCCACCACAGG 60.281 66.667 0.00 0.00 0.00 4.00
465 466 1.728069 GGACGATACGAGCTCAGCA 59.272 57.895 15.40 0.00 0.00 4.41
466 467 0.317436 GGACGATACGAGCTCAGCAG 60.317 60.000 15.40 0.00 0.00 4.24
533 535 0.681564 TTCCCTCGTCCTCAGCTCTC 60.682 60.000 0.00 0.00 0.00 3.20
591 598 0.396974 CACCTCCTCTCTCCTCCCTG 60.397 65.000 0.00 0.00 0.00 4.45
592 599 1.457455 CCTCCTCTCTCCTCCCTGC 60.457 68.421 0.00 0.00 0.00 4.85
593 600 1.457455 CTCCTCTCTCCTCCCTGCC 60.457 68.421 0.00 0.00 0.00 4.85
594 601 2.235602 CTCCTCTCTCCTCCCTGCCA 62.236 65.000 0.00 0.00 0.00 4.92
595 602 2.063378 CCTCTCTCCTCCCTGCCAC 61.063 68.421 0.00 0.00 0.00 5.01
596 603 2.039624 TCTCTCCTCCCTGCCACC 59.960 66.667 0.00 0.00 0.00 4.61
835 859 0.676782 CCTTTCCGCCGTCCAAATCT 60.677 55.000 0.00 0.00 0.00 2.40
965 989 1.076727 TGGTCGCAAGGAGAGGAGA 59.923 57.895 0.00 0.00 38.47 3.71
968 992 2.055042 TCGCAAGGAGAGGAGAGGC 61.055 63.158 0.00 0.00 38.47 4.70
970 994 3.087666 GCAAGGAGAGGAGAGGCGG 62.088 68.421 0.00 0.00 0.00 6.13
971 995 2.762043 AAGGAGAGGAGAGGCGGC 60.762 66.667 0.00 0.00 0.00 6.53
1053 1077 3.075866 GGTACGTACTATGCCTGTGAC 57.924 52.381 24.07 0.34 0.00 3.67
1059 1084 3.798878 CGTACTATGCCTGTGACTGATTG 59.201 47.826 0.00 0.00 0.00 2.67
1073 1098 1.375523 GATTGTGCCCCTCGTTCGT 60.376 57.895 0.00 0.00 0.00 3.85
1082 1107 0.719465 CCCTCGTTCGTTTGATTCGG 59.281 55.000 0.00 0.00 0.00 4.30
1136 1161 1.376609 GATGTGACGGAATGGTGGGC 61.377 60.000 0.00 0.00 0.00 5.36
1272 1297 2.359848 GGTACGCAACAAACCCTTCTTT 59.640 45.455 0.00 0.00 0.00 2.52
1333 1358 1.989864 CGTTCACGGATTCAACGATGA 59.010 47.619 0.00 0.00 44.51 2.92
1334 1359 2.603110 CGTTCACGGATTCAACGATGAT 59.397 45.455 0.00 0.00 44.51 2.45
1335 1360 3.542097 CGTTCACGGATTCAACGATGATG 60.542 47.826 0.00 0.00 44.51 3.07
1336 1361 2.549926 TCACGGATTCAACGATGATGG 58.450 47.619 0.00 0.00 34.96 3.51
1346 1371 1.299165 CGATGATGGACGGACGACC 60.299 63.158 6.28 6.28 0.00 4.79
1377 1402 3.302935 CGTCCTGCATTCTTGATGAATCG 60.303 47.826 0.00 0.00 43.00 3.34
1395 1420 3.109044 TCGTAGTCGTAGGATCTCCTG 57.891 52.381 9.06 0.00 40.61 3.86
1416 1441 7.730084 TCCTGTATATTTTCCATGTCTCTCAG 58.270 38.462 0.00 0.00 0.00 3.35
1480 1505 6.312487 TCTCGTACTGTTTATATGATAGCGC 58.688 40.000 0.00 0.00 0.00 5.92
1510 1535 8.882736 GTTGAAATTAATTTCCTGCCCAATAAG 58.117 33.333 29.31 0.00 44.16 1.73
1540 1565 1.889829 GGATGATACCGACCTCCTGAG 59.110 57.143 0.00 0.00 0.00 3.35
1631 1656 6.007936 ACATACGCTTCTTTGCACATAAAA 57.992 33.333 0.00 0.00 0.00 1.52
1632 1657 6.442952 ACATACGCTTCTTTGCACATAAAAA 58.557 32.000 0.00 0.00 0.00 1.94
1751 1783 7.668525 AACTAGAAGTTATTTTTGGAGACCG 57.331 36.000 0.00 0.00 36.52 4.79
1865 1897 7.724305 TTAACTTTCAAGTATGTGTCCTGTC 57.276 36.000 0.00 0.00 38.57 3.51
1866 1898 5.290493 ACTTTCAAGTATGTGTCCTGTCA 57.710 39.130 0.00 0.00 37.52 3.58
1896 1928 7.548780 GTCTTTCTGATTCTCTGATTTGCTACT 59.451 37.037 0.00 0.00 0.00 2.57
1915 1947 6.830324 TGCTACTGCTTCAGATAAAATGGATT 59.170 34.615 0.29 0.00 40.48 3.01
2038 2070 6.151144 GGATGTATTGTGCTAACTCCTTTTGT 59.849 38.462 0.00 0.00 0.00 2.83
2210 2242 1.204704 CCGAACCTGCAGACAGTATGA 59.795 52.381 17.39 0.00 42.81 2.15
2263 2295 4.963276 TCAAACCCATTCTTATCAAGCG 57.037 40.909 0.00 0.00 0.00 4.68
2268 2300 2.423185 CCCATTCTTATCAAGCGCACAA 59.577 45.455 11.47 0.00 0.00 3.33
2324 2356 1.164411 CTCTATTGTGTTGCGGGCAA 58.836 50.000 1.21 1.21 0.00 4.52
2329 2361 2.029838 TTGTGTTGCGGGCAATTTTT 57.970 40.000 9.56 0.00 38.28 1.94
2438 2470 7.703328 TGTTCATCACTAAAAGTTTTGACCTC 58.297 34.615 11.18 0.00 0.00 3.85
2510 2542 1.737363 GCTGCTACTGCGCTTTACTCT 60.737 52.381 9.73 0.00 43.34 3.24
2755 2787 3.629398 CACAGAAGGCTTCATCATTACCC 59.371 47.826 27.70 0.00 0.00 3.69
2837 2869 9.256477 CGTAATACTGAAATAAGCACCTTATCA 57.744 33.333 0.00 0.00 35.85 2.15
2882 2914 0.748450 ATTTCCCCAAGATGCGCATG 59.252 50.000 30.76 15.73 0.00 4.06
2977 3010 6.056884 TGAAACATTTAGAACGGTTGTAGGT 58.943 36.000 0.00 0.00 0.00 3.08
3023 3056 1.198637 GAAGTTGCTTCTTCGCAGCAT 59.801 47.619 0.00 0.00 46.62 3.79
3059 3216 7.220030 ACTGAGTTGCTTATCAAGTATATGGG 58.780 38.462 0.00 0.00 38.40 4.00
3111 3268 7.038154 TCAAACAATAGTTTCACCAGAAAGG 57.962 36.000 0.00 0.00 45.80 3.11
3112 3269 6.831353 TCAAACAATAGTTTCACCAGAAAGGA 59.169 34.615 0.00 0.00 45.80 3.36
3176 3333 3.507411 AGTGTCTGGCTCTTAGTAACCA 58.493 45.455 0.00 0.00 0.00 3.67
3232 3389 6.096423 ACAAGGTTAGTTACGATGATCAGCTA 59.904 38.462 9.64 0.00 0.00 3.32
3273 3430 7.048629 TGATGGAAAAACTGTGATAAGCAAA 57.951 32.000 0.00 0.00 0.00 3.68
3277 3434 8.140677 TGGAAAAACTGTGATAAGCAAATTTG 57.859 30.769 14.03 14.03 0.00 2.32
3311 3628 3.581024 TGATGCATGCCTCAAGTTTTC 57.419 42.857 21.48 3.21 0.00 2.29
3457 3777 4.080356 TGTTTAGTTATGCAGAGGCCATCT 60.080 41.667 5.01 1.58 40.13 2.90
3471 3791 2.423538 GGCCATCTGTAAATTGCGACTT 59.576 45.455 0.00 0.00 0.00 3.01
3605 3925 4.506095 GGTTTGCTACCTTCTTTACTCCCA 60.506 45.833 1.81 0.00 44.10 4.37
3868 4188 0.993470 TGGGCTTTGGGTATACGGTT 59.007 50.000 0.00 0.00 0.00 4.44
3895 4215 1.462616 AGCTTGGCGTTTCATATGCA 58.537 45.000 0.00 0.00 40.72 3.96
3917 4237 1.339438 ACATGCCTCGCTGAATCTTGT 60.339 47.619 0.00 0.00 0.00 3.16
3960 4280 9.827198 ATATATTTGGTATGTGTTTCCATCCAT 57.173 29.630 0.00 0.00 0.00 3.41
3965 4285 4.750098 GGTATGTGTTTCCATCCATAGTCG 59.250 45.833 0.00 0.00 0.00 4.18
4147 4476 7.636150 AGGGAAGTTTCATTCACAAGATATG 57.364 36.000 0.00 0.00 34.90 1.78
4178 4507 8.539770 TTGCATTGTTGTTAGAGAAAAACAAA 57.460 26.923 9.55 0.00 45.56 2.83
4307 4731 4.142816 CGAGCTTCATAAGGAGTTGTTTGG 60.143 45.833 0.00 0.00 0.00 3.28
4314 4743 0.190815 AGGAGTTGTTTGGGGCCATT 59.809 50.000 4.39 0.00 0.00 3.16
4316 4745 0.321346 GAGTTGTTTGGGGCCATTGG 59.679 55.000 4.39 0.00 0.00 3.16
4325 4754 0.977627 GGGGCCATTGGAAAAGGAGG 60.978 60.000 6.95 0.00 36.63 4.30
4442 4877 7.494625 TGTTTCGTTATCTTTTTGAGACTCAGT 59.505 33.333 5.10 0.00 37.17 3.41
4447 4882 7.584123 CGTTATCTTTTTGAGACTCAGTTGTTG 59.416 37.037 5.10 0.00 37.17 3.33
4472 4907 6.652900 GGAGATGCTTCTCTTTTTCTTACAGT 59.347 38.462 24.20 0.00 46.46 3.55
4536 4971 6.403866 TTTGGCACAGATTTTGAGTGTTAT 57.596 33.333 0.00 0.00 42.39 1.89
4588 5023 9.949174 AAATTGTTTTCAGGATTTAACATTTGC 57.051 25.926 0.00 0.00 31.30 3.68
4589 5024 7.489574 TTGTTTTCAGGATTTAACATTTGCC 57.510 32.000 0.00 0.00 31.30 4.52
4590 5025 6.586344 TGTTTTCAGGATTTAACATTTGCCA 58.414 32.000 0.00 0.00 0.00 4.92
4591 5026 6.705381 TGTTTTCAGGATTTAACATTTGCCAG 59.295 34.615 0.00 0.00 0.00 4.85
4592 5027 6.418057 TTTCAGGATTTAACATTTGCCAGT 57.582 33.333 0.00 0.00 0.00 4.00
4593 5028 6.418057 TTCAGGATTTAACATTTGCCAGTT 57.582 33.333 0.00 0.00 0.00 3.16
4594 5029 6.418057 TCAGGATTTAACATTTGCCAGTTT 57.582 33.333 0.00 0.00 0.00 2.66
4595 5030 6.825610 TCAGGATTTAACATTTGCCAGTTTT 58.174 32.000 0.00 0.00 0.00 2.43
4596 5031 6.928492 TCAGGATTTAACATTTGCCAGTTTTC 59.072 34.615 0.00 0.00 0.00 2.29
4597 5032 6.147656 CAGGATTTAACATTTGCCAGTTTTCC 59.852 38.462 0.00 0.00 0.00 3.13
4598 5033 6.043127 AGGATTTAACATTTGCCAGTTTTCCT 59.957 34.615 0.00 0.00 31.37 3.36
4599 5034 6.710295 GGATTTAACATTTGCCAGTTTTCCTT 59.290 34.615 0.00 0.00 0.00 3.36
4619 5054 3.917329 TTCTTCTCTCGCGAAAAGAGA 57.083 42.857 19.21 19.21 45.76 3.10
4622 5057 4.891566 TCTCGCGAAAAGAGAGGC 57.108 55.556 11.33 0.00 45.27 4.70
4630 5065 2.470938 GAAAAGAGAGGCGGCAGGGT 62.471 60.000 13.08 0.00 0.00 4.34
4667 5102 2.572284 CTCCCCGTCGACAGGTTC 59.428 66.667 16.52 0.00 0.00 3.62
4682 5117 1.292541 GTTCGTGTGTCCCCTCCTC 59.707 63.158 0.00 0.00 0.00 3.71
4684 5119 2.283966 CGTGTGTCCCCTCCTCCT 60.284 66.667 0.00 0.00 0.00 3.69
4685 5120 1.000019 CGTGTGTCCCCTCCTCCTA 60.000 63.158 0.00 0.00 0.00 2.94
4688 5123 0.790993 TGTGTCCCCTCCTCCTAGTT 59.209 55.000 0.00 0.00 0.00 2.24
4696 5131 1.229082 TCCTCCTAGTTGGCCGTGT 60.229 57.895 0.00 0.00 35.26 4.49
4708 5143 2.654289 CCGTGTCGGTGATGTGGA 59.346 61.111 0.00 0.00 42.73 4.02
4709 5144 1.218047 CCGTGTCGGTGATGTGGAT 59.782 57.895 0.00 0.00 42.73 3.41
4710 5145 0.458260 CCGTGTCGGTGATGTGGATA 59.542 55.000 0.00 0.00 42.73 2.59
4711 5146 1.536072 CCGTGTCGGTGATGTGGATAG 60.536 57.143 0.00 0.00 42.73 2.08
4712 5147 1.536072 CGTGTCGGTGATGTGGATAGG 60.536 57.143 0.00 0.00 0.00 2.57
4713 5148 1.119684 TGTCGGTGATGTGGATAGGG 58.880 55.000 0.00 0.00 0.00 3.53
4714 5149 1.120530 GTCGGTGATGTGGATAGGGT 58.879 55.000 0.00 0.00 0.00 4.34
4715 5150 1.068741 GTCGGTGATGTGGATAGGGTC 59.931 57.143 0.00 0.00 0.00 4.46
4716 5151 0.032130 CGGTGATGTGGATAGGGTCG 59.968 60.000 0.00 0.00 0.00 4.79
4717 5152 1.120530 GGTGATGTGGATAGGGTCGT 58.879 55.000 0.00 0.00 0.00 4.34
4718 5153 2.313317 GGTGATGTGGATAGGGTCGTA 58.687 52.381 0.00 0.00 0.00 3.43
4719 5154 2.296471 GGTGATGTGGATAGGGTCGTAG 59.704 54.545 0.00 0.00 0.00 3.51
4720 5155 2.296471 GTGATGTGGATAGGGTCGTAGG 59.704 54.545 0.00 0.00 0.00 3.18
4721 5156 1.893801 GATGTGGATAGGGTCGTAGGG 59.106 57.143 0.00 0.00 0.00 3.53
4722 5157 0.632835 TGTGGATAGGGTCGTAGGGT 59.367 55.000 0.00 0.00 0.00 4.34
4723 5158 1.007479 TGTGGATAGGGTCGTAGGGTT 59.993 52.381 0.00 0.00 0.00 4.11
4724 5159 2.244510 TGTGGATAGGGTCGTAGGGTTA 59.755 50.000 0.00 0.00 0.00 2.85
4725 5160 2.889678 GTGGATAGGGTCGTAGGGTTAG 59.110 54.545 0.00 0.00 0.00 2.34
4726 5161 2.158415 TGGATAGGGTCGTAGGGTTAGG 60.158 54.545 0.00 0.00 0.00 2.69
4727 5162 2.158400 GGATAGGGTCGTAGGGTTAGGT 60.158 54.545 0.00 0.00 0.00 3.08
4728 5163 3.570540 GATAGGGTCGTAGGGTTAGGTT 58.429 50.000 0.00 0.00 0.00 3.50
4729 5164 2.332332 AGGGTCGTAGGGTTAGGTTT 57.668 50.000 0.00 0.00 0.00 3.27
4730 5165 3.473113 AGGGTCGTAGGGTTAGGTTTA 57.527 47.619 0.00 0.00 0.00 2.01
4731 5166 3.369175 AGGGTCGTAGGGTTAGGTTTAG 58.631 50.000 0.00 0.00 0.00 1.85
4732 5167 2.159043 GGGTCGTAGGGTTAGGTTTAGC 60.159 54.545 0.00 0.00 0.00 3.09
4733 5168 2.762887 GGTCGTAGGGTTAGGTTTAGCT 59.237 50.000 0.00 0.00 0.00 3.32
4734 5169 3.196469 GGTCGTAGGGTTAGGTTTAGCTT 59.804 47.826 0.00 0.00 0.00 3.74
4735 5170 4.323028 GGTCGTAGGGTTAGGTTTAGCTTT 60.323 45.833 0.00 0.00 0.00 3.51
4736 5171 4.867047 GTCGTAGGGTTAGGTTTAGCTTTC 59.133 45.833 0.00 0.00 0.00 2.62
4737 5172 4.774200 TCGTAGGGTTAGGTTTAGCTTTCT 59.226 41.667 0.00 0.00 0.00 2.52
4738 5173 5.246883 TCGTAGGGTTAGGTTTAGCTTTCTT 59.753 40.000 0.00 0.00 0.00 2.52
4739 5174 5.350640 CGTAGGGTTAGGTTTAGCTTTCTTG 59.649 44.000 0.00 0.00 0.00 3.02
4740 5175 4.079970 AGGGTTAGGTTTAGCTTTCTTGC 58.920 43.478 0.00 0.00 0.00 4.01
4741 5176 3.119955 GGGTTAGGTTTAGCTTTCTTGCG 60.120 47.826 0.00 0.00 38.13 4.85
4742 5177 3.119955 GGTTAGGTTTAGCTTTCTTGCGG 60.120 47.826 0.00 0.00 38.13 5.69
4743 5178 0.881796 AGGTTTAGCTTTCTTGCGGC 59.118 50.000 0.00 0.00 38.13 6.53
4744 5179 0.454452 GGTTTAGCTTTCTTGCGGCG 60.454 55.000 0.51 0.51 38.13 6.46
4745 5180 0.454452 GTTTAGCTTTCTTGCGGCGG 60.454 55.000 9.78 0.00 38.13 6.13
4746 5181 2.195123 TTTAGCTTTCTTGCGGCGGC 62.195 55.000 9.78 9.68 38.13 6.53
4772 5207 3.499737 GGCGATGCCGGTGTTGAG 61.500 66.667 1.90 0.00 39.62 3.02
4773 5208 2.434185 GCGATGCCGGTGTTGAGA 60.434 61.111 1.90 0.00 36.06 3.27
4774 5209 2.032634 GCGATGCCGGTGTTGAGAA 61.033 57.895 1.90 0.00 36.06 2.87
4775 5210 1.970917 GCGATGCCGGTGTTGAGAAG 61.971 60.000 1.90 0.00 36.06 2.85
4776 5211 0.389817 CGATGCCGGTGTTGAGAAGA 60.390 55.000 1.90 0.00 0.00 2.87
4777 5212 1.808411 GATGCCGGTGTTGAGAAGAA 58.192 50.000 1.90 0.00 0.00 2.52
4778 5213 2.359900 GATGCCGGTGTTGAGAAGAAT 58.640 47.619 1.90 0.00 0.00 2.40
4779 5214 3.531538 GATGCCGGTGTTGAGAAGAATA 58.468 45.455 1.90 0.00 0.00 1.75
4780 5215 3.410631 TGCCGGTGTTGAGAAGAATAA 57.589 42.857 1.90 0.00 0.00 1.40
4781 5216 3.334691 TGCCGGTGTTGAGAAGAATAAG 58.665 45.455 1.90 0.00 0.00 1.73
4782 5217 3.244422 TGCCGGTGTTGAGAAGAATAAGT 60.244 43.478 1.90 0.00 0.00 2.24
4783 5218 3.751698 GCCGGTGTTGAGAAGAATAAGTT 59.248 43.478 1.90 0.00 0.00 2.66
4784 5219 4.215613 GCCGGTGTTGAGAAGAATAAGTTT 59.784 41.667 1.90 0.00 0.00 2.66
4785 5220 5.617087 GCCGGTGTTGAGAAGAATAAGTTTC 60.617 44.000 1.90 0.00 0.00 2.78
4786 5221 5.701290 CCGGTGTTGAGAAGAATAAGTTTCT 59.299 40.000 0.00 0.00 36.41 2.52
4787 5222 6.128526 CCGGTGTTGAGAAGAATAAGTTTCTC 60.129 42.308 7.17 7.17 46.01 2.87
4788 5223 6.128526 CGGTGTTGAGAAGAATAAGTTTCTCC 60.129 42.308 10.66 0.00 45.50 3.71
4789 5224 6.937465 GGTGTTGAGAAGAATAAGTTTCTCCT 59.063 38.462 10.66 0.00 45.50 3.69
4790 5225 7.095017 GGTGTTGAGAAGAATAAGTTTCTCCTG 60.095 40.741 10.66 0.00 45.50 3.86
4791 5226 6.936900 TGTTGAGAAGAATAAGTTTCTCCTGG 59.063 38.462 10.66 0.00 45.50 4.45
4792 5227 5.491982 TGAGAAGAATAAGTTTCTCCTGGC 58.508 41.667 10.66 0.00 45.50 4.85
4793 5228 5.249393 TGAGAAGAATAAGTTTCTCCTGGCT 59.751 40.000 10.66 0.00 45.50 4.75
4794 5229 5.739959 AGAAGAATAAGTTTCTCCTGGCTC 58.260 41.667 0.00 0.00 0.00 4.70
4795 5230 4.495690 AGAATAAGTTTCTCCTGGCTCC 57.504 45.455 0.00 0.00 0.00 4.70
4796 5231 4.107820 AGAATAAGTTTCTCCTGGCTCCT 58.892 43.478 0.00 0.00 0.00 3.69
4797 5232 4.538089 AGAATAAGTTTCTCCTGGCTCCTT 59.462 41.667 0.00 0.00 0.00 3.36
4798 5233 2.575805 AAGTTTCTCCTGGCTCCTTG 57.424 50.000 0.00 0.00 0.00 3.61
4799 5234 1.439543 AGTTTCTCCTGGCTCCTTGT 58.560 50.000 0.00 0.00 0.00 3.16
4800 5235 1.349357 AGTTTCTCCTGGCTCCTTGTC 59.651 52.381 0.00 0.00 0.00 3.18
4801 5236 0.693049 TTTCTCCTGGCTCCTTGTCC 59.307 55.000 0.00 0.00 0.00 4.02
4802 5237 0.473694 TTCTCCTGGCTCCTTGTCCA 60.474 55.000 0.00 0.00 0.00 4.02
4803 5238 1.194781 TCTCCTGGCTCCTTGTCCAC 61.195 60.000 0.00 0.00 0.00 4.02
4804 5239 2.190488 CTCCTGGCTCCTTGTCCACC 62.190 65.000 0.00 0.00 0.00 4.61
4805 5240 2.227036 CCTGGCTCCTTGTCCACCT 61.227 63.158 0.00 0.00 0.00 4.00
4806 5241 1.298014 CTGGCTCCTTGTCCACCTC 59.702 63.158 0.00 0.00 0.00 3.85
4807 5242 2.266055 GGCTCCTTGTCCACCTCG 59.734 66.667 0.00 0.00 0.00 4.63
4808 5243 2.435059 GCTCCTTGTCCACCTCGC 60.435 66.667 0.00 0.00 0.00 5.03
4809 5244 2.266055 CTCCTTGTCCACCTCGCC 59.734 66.667 0.00 0.00 0.00 5.54
4810 5245 3.649277 CTCCTTGTCCACCTCGCCG 62.649 68.421 0.00 0.00 0.00 6.46
4811 5246 3.691342 CCTTGTCCACCTCGCCGA 61.691 66.667 0.00 0.00 0.00 5.54
4812 5247 2.342279 CTTGTCCACCTCGCCGAA 59.658 61.111 0.00 0.00 0.00 4.30
4813 5248 1.738099 CTTGTCCACCTCGCCGAAG 60.738 63.158 0.00 0.00 0.00 3.79
4826 5261 3.870606 CGAAGGCGGTTTCATCGT 58.129 55.556 0.00 0.00 0.00 3.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.733380 CGGATATGAGGCTTCTAGATGCG 60.733 52.174 20.70 4.41 32.86 4.73
1 2 3.779759 CGGATATGAGGCTTCTAGATGC 58.220 50.000 19.67 19.67 0.00 3.91
2 3 3.430098 GGCGGATATGAGGCTTCTAGATG 60.430 52.174 0.00 0.00 0.00 2.90
3 4 2.763448 GGCGGATATGAGGCTTCTAGAT 59.237 50.000 0.00 0.00 0.00 1.98
4 5 2.171840 GGCGGATATGAGGCTTCTAGA 58.828 52.381 0.00 0.00 0.00 2.43
5 6 2.175202 AGGCGGATATGAGGCTTCTAG 58.825 52.381 0.00 0.00 40.53 2.43
6 7 2.310779 AGGCGGATATGAGGCTTCTA 57.689 50.000 0.00 0.00 40.53 2.10
7 8 3.155897 AGGCGGATATGAGGCTTCT 57.844 52.632 0.00 0.00 40.53 2.85
10 11 5.431765 CAAATATAAGGCGGATATGAGGCT 58.568 41.667 0.00 0.00 45.54 4.58
11 12 4.576463 CCAAATATAAGGCGGATATGAGGC 59.424 45.833 0.00 0.00 0.00 4.70
12 13 5.126067 CCCAAATATAAGGCGGATATGAGG 58.874 45.833 0.00 2.08 0.00 3.86
13 14 5.745227 ACCCAAATATAAGGCGGATATGAG 58.255 41.667 0.00 0.00 0.00 2.90
14 15 5.772393 ACCCAAATATAAGGCGGATATGA 57.228 39.130 0.00 0.00 0.00 2.15
15 16 7.335627 TCTAACCCAAATATAAGGCGGATATG 58.664 38.462 0.00 0.00 0.00 1.78
16 17 7.504926 TCTAACCCAAATATAAGGCGGATAT 57.495 36.000 0.00 0.00 0.00 1.63
17 18 6.938698 TCTAACCCAAATATAAGGCGGATA 57.061 37.500 0.00 0.00 0.00 2.59
18 19 5.836024 TCTAACCCAAATATAAGGCGGAT 57.164 39.130 0.00 0.00 0.00 4.18
19 20 5.836024 ATCTAACCCAAATATAAGGCGGA 57.164 39.130 0.00 0.00 0.00 5.54
20 21 7.335627 TCATATCTAACCCAAATATAAGGCGG 58.664 38.462 0.00 0.00 0.00 6.13
21 22 7.495934 CCTCATATCTAACCCAAATATAAGGCG 59.504 40.741 0.00 0.00 0.00 5.52
22 23 7.775561 CCCTCATATCTAACCCAAATATAAGGC 59.224 40.741 0.00 0.00 0.00 4.35
23 24 8.275040 CCCCTCATATCTAACCCAAATATAAGG 58.725 40.741 0.00 0.00 0.00 2.69
24 25 8.836735 ACCCCTCATATCTAACCCAAATATAAG 58.163 37.037 0.00 0.00 0.00 1.73
25 26 8.611257 CACCCCTCATATCTAACCCAAATATAA 58.389 37.037 0.00 0.00 0.00 0.98
26 27 7.742213 ACACCCCTCATATCTAACCCAAATATA 59.258 37.037 0.00 0.00 0.00 0.86
27 28 6.566480 ACACCCCTCATATCTAACCCAAATAT 59.434 38.462 0.00 0.00 0.00 1.28
28 29 5.914716 ACACCCCTCATATCTAACCCAAATA 59.085 40.000 0.00 0.00 0.00 1.40
29 30 4.731929 ACACCCCTCATATCTAACCCAAAT 59.268 41.667 0.00 0.00 0.00 2.32
30 31 4.116113 ACACCCCTCATATCTAACCCAAA 58.884 43.478 0.00 0.00 0.00 3.28
31 32 3.714798 GACACCCCTCATATCTAACCCAA 59.285 47.826 0.00 0.00 0.00 4.12
32 33 3.314693 GACACCCCTCATATCTAACCCA 58.685 50.000 0.00 0.00 0.00 4.51
33 34 2.299297 CGACACCCCTCATATCTAACCC 59.701 54.545 0.00 0.00 0.00 4.11
34 35 2.299297 CCGACACCCCTCATATCTAACC 59.701 54.545 0.00 0.00 0.00 2.85
35 36 2.963782 ACCGACACCCCTCATATCTAAC 59.036 50.000 0.00 0.00 0.00 2.34
36 37 3.228453 GACCGACACCCCTCATATCTAA 58.772 50.000 0.00 0.00 0.00 2.10
37 38 2.176148 TGACCGACACCCCTCATATCTA 59.824 50.000 0.00 0.00 0.00 1.98
38 39 1.063190 TGACCGACACCCCTCATATCT 60.063 52.381 0.00 0.00 0.00 1.98
39 40 1.341531 CTGACCGACACCCCTCATATC 59.658 57.143 0.00 0.00 0.00 1.63
40 41 1.414158 CTGACCGACACCCCTCATAT 58.586 55.000 0.00 0.00 0.00 1.78
41 42 1.327690 GCTGACCGACACCCCTCATA 61.328 60.000 0.00 0.00 0.00 2.15
42 43 2.660064 GCTGACCGACACCCCTCAT 61.660 63.158 0.00 0.00 0.00 2.90
43 44 3.311110 GCTGACCGACACCCCTCA 61.311 66.667 0.00 0.00 0.00 3.86
44 45 4.083862 GGCTGACCGACACCCCTC 62.084 72.222 0.00 0.00 0.00 4.30
56 57 3.561120 ATTCAAACGCCCGGGCTGA 62.561 57.895 41.01 33.71 39.32 4.26
57 58 3.051392 GATTCAAACGCCCGGGCTG 62.051 63.158 41.01 33.95 39.32 4.85
58 59 2.750237 GATTCAAACGCCCGGGCT 60.750 61.111 41.01 26.06 39.32 5.19
59 60 2.340328 AAGATTCAAACGCCCGGGC 61.340 57.895 36.69 36.69 37.85 6.13
60 61 1.241315 ACAAGATTCAAACGCCCGGG 61.241 55.000 19.09 19.09 0.00 5.73
61 62 0.596082 AACAAGATTCAAACGCCCGG 59.404 50.000 0.00 0.00 0.00 5.73
62 63 2.415697 AAACAAGATTCAAACGCCCG 57.584 45.000 0.00 0.00 0.00 6.13
63 64 5.116069 TCTTAAACAAGATTCAAACGCCC 57.884 39.130 0.00 0.00 0.00 6.13
64 65 5.117135 GCTTCTTAAACAAGATTCAAACGCC 59.883 40.000 0.00 0.00 0.00 5.68
65 66 5.117135 GGCTTCTTAAACAAGATTCAAACGC 59.883 40.000 0.00 0.00 0.00 4.84
66 67 5.629435 GGGCTTCTTAAACAAGATTCAAACG 59.371 40.000 0.00 0.00 0.00 3.60
67 68 5.629435 CGGGCTTCTTAAACAAGATTCAAAC 59.371 40.000 0.00 0.00 0.00 2.93
68 69 5.300792 ACGGGCTTCTTAAACAAGATTCAAA 59.699 36.000 0.00 0.00 0.00 2.69
69 70 4.825085 ACGGGCTTCTTAAACAAGATTCAA 59.175 37.500 0.00 0.00 0.00 2.69
70 71 4.394729 ACGGGCTTCTTAAACAAGATTCA 58.605 39.130 0.00 0.00 0.00 2.57
71 72 5.372547 AACGGGCTTCTTAAACAAGATTC 57.627 39.130 0.00 0.00 0.00 2.52
72 73 5.784578 AAACGGGCTTCTTAAACAAGATT 57.215 34.783 0.00 0.00 0.00 2.40
73 74 5.414765 CCTAAACGGGCTTCTTAAACAAGAT 59.585 40.000 0.00 0.00 0.00 2.40
74 75 4.758165 CCTAAACGGGCTTCTTAAACAAGA 59.242 41.667 0.00 0.00 0.00 3.02
75 76 4.517832 ACCTAAACGGGCTTCTTAAACAAG 59.482 41.667 0.00 0.00 36.97 3.16
76 77 4.463070 ACCTAAACGGGCTTCTTAAACAA 58.537 39.130 0.00 0.00 36.97 2.83
77 78 4.067192 GACCTAAACGGGCTTCTTAAACA 58.933 43.478 0.00 0.00 38.04 2.83
78 79 3.124128 CGACCTAAACGGGCTTCTTAAAC 59.876 47.826 0.00 0.00 39.40 2.01
79 80 3.006752 TCGACCTAAACGGGCTTCTTAAA 59.993 43.478 0.00 0.00 39.40 1.52
80 81 2.562298 TCGACCTAAACGGGCTTCTTAA 59.438 45.455 0.00 0.00 39.40 1.85
81 82 2.170166 TCGACCTAAACGGGCTTCTTA 58.830 47.619 0.00 0.00 39.40 2.10
82 83 0.971386 TCGACCTAAACGGGCTTCTT 59.029 50.000 0.00 0.00 39.40 2.52
83 84 0.971386 TTCGACCTAAACGGGCTTCT 59.029 50.000 0.00 0.00 39.40 2.85
84 85 2.019948 ATTCGACCTAAACGGGCTTC 57.980 50.000 0.00 0.00 39.40 3.86
85 86 2.484742 AATTCGACCTAAACGGGCTT 57.515 45.000 0.00 0.00 39.40 4.35
86 87 2.484742 AAATTCGACCTAAACGGGCT 57.515 45.000 0.00 0.00 39.40 5.19
87 88 3.127081 GAAAATTCGACCTAAACGGGC 57.873 47.619 0.00 0.00 37.50 6.13
100 101 1.133869 CGGCCGGTCACGAAAATTC 59.866 57.895 20.10 0.00 44.60 2.17
101 102 2.329614 CCGGCCGGTCACGAAAATT 61.330 57.895 36.64 0.00 44.60 1.82
102 103 2.744709 CCGGCCGGTCACGAAAAT 60.745 61.111 36.64 0.00 44.60 1.82
118 119 4.489771 CCAGATGGCCCGGTCACC 62.490 72.222 0.00 0.00 0.00 4.02
128 129 2.046314 AAACGTCCGGCCAGATGG 60.046 61.111 12.85 0.16 38.53 3.51
129 130 1.361668 CTCAAACGTCCGGCCAGATG 61.362 60.000 6.64 6.64 0.00 2.90
130 131 1.079127 CTCAAACGTCCGGCCAGAT 60.079 57.895 2.24 0.00 0.00 2.90
131 132 2.342279 CTCAAACGTCCGGCCAGA 59.658 61.111 2.24 0.00 0.00 3.86
132 133 2.742372 CCTCAAACGTCCGGCCAG 60.742 66.667 2.24 0.00 0.00 4.85
136 137 4.675029 ACCGCCTCAAACGTCCGG 62.675 66.667 0.00 0.00 44.19 5.14
137 138 2.248835 AAACCGCCTCAAACGTCCG 61.249 57.895 0.00 0.00 0.00 4.79
138 139 1.281656 CAAACCGCCTCAAACGTCC 59.718 57.895 0.00 0.00 0.00 4.79
139 140 1.281656 CCAAACCGCCTCAAACGTC 59.718 57.895 0.00 0.00 0.00 4.34
140 141 2.190841 CCCAAACCGCCTCAAACGT 61.191 57.895 0.00 0.00 0.00 3.99
141 142 2.642700 CCCAAACCGCCTCAAACG 59.357 61.111 0.00 0.00 0.00 3.60
142 143 2.338620 GCCCAAACCGCCTCAAAC 59.661 61.111 0.00 0.00 0.00 2.93
143 144 3.291383 CGCCCAAACCGCCTCAAA 61.291 61.111 0.00 0.00 0.00 2.69
159 160 8.025579 CTCATTTATGACTAAGAGCATCGGCG 62.026 46.154 0.00 0.00 37.64 6.46
160 161 4.991056 TCATTTATGACTAAGAGCATCGGC 59.009 41.667 0.00 0.00 42.67 5.54
161 162 5.119898 GCTCATTTATGACTAAGAGCATCGG 59.880 44.000 7.29 0.00 45.67 4.18
162 163 6.150738 GCTCATTTATGACTAAGAGCATCG 57.849 41.667 7.29 0.00 45.67 3.84
166 167 5.043903 TCGTGCTCATTTATGACTAAGAGC 58.956 41.667 0.00 0.00 46.33 4.09
167 168 8.978564 ATATCGTGCTCATTTATGACTAAGAG 57.021 34.615 0.00 0.00 32.50 2.85
196 197 4.572795 TGCGTCTGTACTGATGTTCAAAAA 59.427 37.500 19.48 0.20 0.00 1.94
197 198 4.123506 TGCGTCTGTACTGATGTTCAAAA 58.876 39.130 19.48 1.55 0.00 2.44
198 199 3.723260 TGCGTCTGTACTGATGTTCAAA 58.277 40.909 19.48 2.93 0.00 2.69
199 200 3.378911 TGCGTCTGTACTGATGTTCAA 57.621 42.857 19.48 4.88 0.00 2.69
200 201 3.317150 CTTGCGTCTGTACTGATGTTCA 58.683 45.455 19.48 9.90 0.00 3.18
201 202 2.092838 GCTTGCGTCTGTACTGATGTTC 59.907 50.000 19.48 7.84 0.00 3.18
202 203 2.069273 GCTTGCGTCTGTACTGATGTT 58.931 47.619 19.48 0.00 0.00 2.71
203 204 1.714794 GCTTGCGTCTGTACTGATGT 58.285 50.000 19.48 0.00 0.00 3.06
204 205 0.642291 CGCTTGCGTCTGTACTGATG 59.358 55.000 15.57 15.57 0.00 3.07
205 206 1.078759 GCGCTTGCGTCTGTACTGAT 61.079 55.000 16.38 0.00 0.00 2.90
206 207 1.733041 GCGCTTGCGTCTGTACTGA 60.733 57.895 16.38 0.00 0.00 3.41
207 208 1.678269 GAGCGCTTGCGTCTGTACTG 61.678 60.000 13.26 0.00 45.69 2.74
208 209 1.444553 GAGCGCTTGCGTCTGTACT 60.445 57.895 13.26 3.73 45.69 2.73
209 210 1.078759 ATGAGCGCTTGCGTCTGTAC 61.079 55.000 13.26 0.00 45.69 2.90
210 211 0.454196 TATGAGCGCTTGCGTCTGTA 59.546 50.000 13.26 6.26 45.69 2.74
211 212 1.078759 GTATGAGCGCTTGCGTCTGT 61.079 55.000 13.26 7.66 45.69 3.41
212 213 1.078201 TGTATGAGCGCTTGCGTCTG 61.078 55.000 13.26 0.00 45.69 3.51
213 214 0.179100 ATGTATGAGCGCTTGCGTCT 60.179 50.000 13.26 13.17 45.69 4.18
214 215 1.190323 GTATGTATGAGCGCTTGCGTC 59.810 52.381 13.26 12.36 45.69 5.19
215 216 1.209128 GTATGTATGAGCGCTTGCGT 58.791 50.000 13.26 3.97 45.69 5.24
216 217 1.071239 GTGTATGTATGAGCGCTTGCG 60.071 52.381 13.26 10.90 45.69 4.85
217 218 1.071239 CGTGTATGTATGAGCGCTTGC 60.071 52.381 13.26 0.00 39.58 4.01
218 219 1.071239 GCGTGTATGTATGAGCGCTTG 60.071 52.381 13.26 0.00 41.37 4.01
219 220 1.209128 GCGTGTATGTATGAGCGCTT 58.791 50.000 13.26 0.00 41.37 4.68
220 221 0.102300 TGCGTGTATGTATGAGCGCT 59.898 50.000 11.27 11.27 44.34 5.92
221 222 1.139989 ATGCGTGTATGTATGAGCGC 58.860 50.000 0.00 0.00 44.29 5.92
222 223 3.119628 GTGTATGCGTGTATGTATGAGCG 59.880 47.826 0.00 0.00 0.00 5.03
223 224 4.299155 AGTGTATGCGTGTATGTATGAGC 58.701 43.478 0.00 0.00 0.00 4.26
224 225 5.519722 TGAGTGTATGCGTGTATGTATGAG 58.480 41.667 0.00 0.00 0.00 2.90
225 226 5.508200 TGAGTGTATGCGTGTATGTATGA 57.492 39.130 0.00 0.00 0.00 2.15
226 227 6.128822 GGAATGAGTGTATGCGTGTATGTATG 60.129 42.308 0.00 0.00 0.00 2.39
227 228 5.926542 GGAATGAGTGTATGCGTGTATGTAT 59.073 40.000 0.00 0.00 0.00 2.29
228 229 5.068591 AGGAATGAGTGTATGCGTGTATGTA 59.931 40.000 0.00 0.00 0.00 2.29
229 230 4.119862 GGAATGAGTGTATGCGTGTATGT 58.880 43.478 0.00 0.00 0.00 2.29
230 231 4.371786 AGGAATGAGTGTATGCGTGTATG 58.628 43.478 0.00 0.00 0.00 2.39
231 232 4.672587 AGGAATGAGTGTATGCGTGTAT 57.327 40.909 0.00 0.00 0.00 2.29
232 233 5.300792 TCATAGGAATGAGTGTATGCGTGTA 59.699 40.000 0.00 0.00 37.20 2.90
233 234 4.099419 TCATAGGAATGAGTGTATGCGTGT 59.901 41.667 0.00 0.00 37.20 4.49
234 235 4.620982 TCATAGGAATGAGTGTATGCGTG 58.379 43.478 0.00 0.00 37.20 5.34
235 236 4.937201 TCATAGGAATGAGTGTATGCGT 57.063 40.909 0.00 0.00 37.20 5.24
236 237 4.148871 CGTTCATAGGAATGAGTGTATGCG 59.851 45.833 3.19 0.00 42.97 4.73
237 238 4.084328 GCGTTCATAGGAATGAGTGTATGC 60.084 45.833 13.33 0.00 42.97 3.14
238 239 5.049828 TGCGTTCATAGGAATGAGTGTATG 58.950 41.667 13.33 0.00 42.97 2.39
239 240 5.050490 GTGCGTTCATAGGAATGAGTGTAT 58.950 41.667 13.33 0.00 42.97 2.29
240 241 4.081917 TGTGCGTTCATAGGAATGAGTGTA 60.082 41.667 13.33 0.00 42.97 2.90
241 242 3.262420 GTGCGTTCATAGGAATGAGTGT 58.738 45.455 13.33 0.00 42.97 3.55
242 243 3.062639 GTGTGCGTTCATAGGAATGAGTG 59.937 47.826 13.33 0.00 42.97 3.51
243 244 3.262420 GTGTGCGTTCATAGGAATGAGT 58.738 45.455 13.33 0.00 42.97 3.41
244 245 3.261580 TGTGTGCGTTCATAGGAATGAG 58.738 45.455 13.33 0.26 42.97 2.90
245 246 3.261580 CTGTGTGCGTTCATAGGAATGA 58.738 45.455 13.33 0.00 41.62 2.57
246 247 2.352651 CCTGTGTGCGTTCATAGGAATG 59.647 50.000 15.44 4.97 45.44 2.67
247 248 2.632377 CCTGTGTGCGTTCATAGGAAT 58.368 47.619 15.44 0.00 45.44 3.01
248 249 1.943968 GCCTGTGTGCGTTCATAGGAA 60.944 52.381 21.38 0.00 45.44 3.36
249 250 0.391130 GCCTGTGTGCGTTCATAGGA 60.391 55.000 21.38 0.00 45.44 2.94
250 251 0.673333 TGCCTGTGTGCGTTCATAGG 60.673 55.000 15.93 15.93 45.40 2.57
251 252 0.443869 GTGCCTGTGTGCGTTCATAG 59.556 55.000 0.00 0.00 0.00 2.23
252 253 0.250081 TGTGCCTGTGTGCGTTCATA 60.250 50.000 0.00 0.00 0.00 2.15
253 254 1.525765 TGTGCCTGTGTGCGTTCAT 60.526 52.632 0.00 0.00 0.00 2.57
254 255 2.124942 TGTGCCTGTGTGCGTTCA 60.125 55.556 0.00 0.00 0.00 3.18
255 256 2.327940 GTGTGCCTGTGTGCGTTC 59.672 61.111 0.00 0.00 0.00 3.95
256 257 3.209097 GGTGTGCCTGTGTGCGTT 61.209 61.111 0.00 0.00 0.00 4.84
257 258 2.390306 TATGGTGTGCCTGTGTGCGT 62.390 55.000 0.00 0.00 35.27 5.24
258 259 1.026182 ATATGGTGTGCCTGTGTGCG 61.026 55.000 0.00 0.00 35.27 5.34
259 260 0.734889 GATATGGTGTGCCTGTGTGC 59.265 55.000 0.00 0.00 35.27 4.57
260 261 1.065199 AGGATATGGTGTGCCTGTGTG 60.065 52.381 0.00 0.00 35.27 3.82
261 262 1.289160 AGGATATGGTGTGCCTGTGT 58.711 50.000 0.00 0.00 35.27 3.72
262 263 2.425143 AAGGATATGGTGTGCCTGTG 57.575 50.000 0.00 0.00 35.27 3.66
263 264 3.716353 TCATAAGGATATGGTGTGCCTGT 59.284 43.478 0.00 0.00 39.54 4.00
264 265 4.356405 TCATAAGGATATGGTGTGCCTG 57.644 45.455 0.00 0.00 39.54 4.85
265 266 4.165950 TGTTCATAAGGATATGGTGTGCCT 59.834 41.667 0.00 0.00 39.54 4.75
266 267 4.275936 GTGTTCATAAGGATATGGTGTGCC 59.724 45.833 0.00 0.00 39.54 5.01
267 268 4.275936 GGTGTTCATAAGGATATGGTGTGC 59.724 45.833 0.00 0.00 39.54 4.57
268 269 5.436175 TGGTGTTCATAAGGATATGGTGTG 58.564 41.667 0.00 0.00 39.54 3.82
269 270 5.708736 TGGTGTTCATAAGGATATGGTGT 57.291 39.130 0.00 0.00 39.54 4.16
270 271 8.868522 ATATTGGTGTTCATAAGGATATGGTG 57.131 34.615 0.00 0.00 39.54 4.17
282 283 8.912988 CCAGGTAACAATTATATTGGTGTTCAT 58.087 33.333 0.37 0.00 35.82 2.57
283 284 8.110271 TCCAGGTAACAATTATATTGGTGTTCA 58.890 33.333 0.37 0.00 35.82 3.18
284 285 8.514330 TCCAGGTAACAATTATATTGGTGTTC 57.486 34.615 0.37 0.00 35.82 3.18
285 286 8.887264 TTCCAGGTAACAATTATATTGGTGTT 57.113 30.769 0.37 0.00 37.86 3.32
286 287 8.887264 TTTCCAGGTAACAATTATATTGGTGT 57.113 30.769 0.37 0.00 41.41 4.16
310 311 3.645884 GACACATCATGCAGCACTTTTT 58.354 40.909 0.00 0.00 0.00 1.94
311 312 2.351060 CGACACATCATGCAGCACTTTT 60.351 45.455 0.00 0.00 0.00 2.27
312 313 1.198408 CGACACATCATGCAGCACTTT 59.802 47.619 0.00 0.00 0.00 2.66
313 314 0.800631 CGACACATCATGCAGCACTT 59.199 50.000 0.00 0.00 0.00 3.16
314 315 0.037046 TCGACACATCATGCAGCACT 60.037 50.000 0.00 0.00 0.00 4.40
315 316 0.372679 CTCGACACATCATGCAGCAC 59.627 55.000 0.00 0.00 0.00 4.40
316 317 0.247185 TCTCGACACATCATGCAGCA 59.753 50.000 0.00 0.00 0.00 4.41
317 318 0.649475 GTCTCGACACATCATGCAGC 59.351 55.000 0.00 0.00 0.00 5.25
318 319 2.000429 TGTCTCGACACATCATGCAG 58.000 50.000 0.00 0.00 36.21 4.41
353 354 2.251371 GTGCCTTGTTCGGTTCGC 59.749 61.111 0.00 0.00 0.00 4.70
360 361 1.527380 TGGGGAACGTGCCTTGTTC 60.527 57.895 13.69 0.00 43.87 3.18
385 386 1.000607 GGGGTTTCCGCTTTCTTGTTC 60.001 52.381 0.00 0.00 33.42 3.18
467 468 3.032609 GATGCGATGCGACGGGAG 61.033 66.667 0.00 0.00 0.00 4.30
514 515 0.681564 GAGAGCTGAGGACGAGGGAA 60.682 60.000 0.00 0.00 0.00 3.97
688 705 3.120086 GCTCCACCACCACCACTGT 62.120 63.158 0.00 0.00 0.00 3.55
827 851 3.269034 AGAGAAAGGGGGAAGATTTGGA 58.731 45.455 0.00 0.00 0.00 3.53
835 859 0.103608 TGGGGAAGAGAAAGGGGGAA 60.104 55.000 0.00 0.00 0.00 3.97
954 978 2.762043 GCCGCCTCTCCTCTCCTT 60.762 66.667 0.00 0.00 0.00 3.36
1041 1065 2.353889 GCACAATCAGTCACAGGCATAG 59.646 50.000 0.00 0.00 0.00 2.23
1047 1071 0.037303 AGGGGCACAATCAGTCACAG 59.963 55.000 0.00 0.00 0.00 3.66
1049 1073 1.021390 CGAGGGGCACAATCAGTCAC 61.021 60.000 0.00 0.00 0.00 3.67
1050 1074 1.296392 CGAGGGGCACAATCAGTCA 59.704 57.895 0.00 0.00 0.00 3.41
1051 1075 0.321653 AACGAGGGGCACAATCAGTC 60.322 55.000 0.00 0.00 0.00 3.51
1052 1076 0.321653 GAACGAGGGGCACAATCAGT 60.322 55.000 0.00 0.00 0.00 3.41
1053 1077 1.361668 CGAACGAGGGGCACAATCAG 61.362 60.000 0.00 0.00 0.00 2.90
1059 1084 0.953960 ATCAAACGAACGAGGGGCAC 60.954 55.000 0.14 0.00 0.00 5.01
1136 1161 2.672996 CTTCCCACCTGCAACCCG 60.673 66.667 0.00 0.00 0.00 5.28
1328 1353 1.299165 GGTCGTCCGTCCATCATCG 60.299 63.158 0.00 0.00 0.00 3.84
1333 1358 1.304217 AGACAGGTCGTCCGTCCAT 60.304 57.895 15.58 0.00 46.69 3.41
1334 1359 2.114625 AGACAGGTCGTCCGTCCA 59.885 61.111 15.58 0.00 46.69 4.02
1335 1360 1.803366 AACAGACAGGTCGTCCGTCC 61.803 60.000 15.58 0.00 46.69 4.79
1336 1361 0.386985 GAACAGACAGGTCGTCCGTC 60.387 60.000 12.85 12.85 46.69 4.79
1346 1371 1.728971 GAATGCAGGACGAACAGACAG 59.271 52.381 0.00 0.00 0.00 3.51
1377 1402 8.564509 AAATATACAGGAGATCCTACGACTAC 57.435 38.462 0.00 0.00 46.65 2.73
1395 1420 6.291377 TGGCTGAGAGACATGGAAAATATAC 58.709 40.000 0.00 0.00 0.00 1.47
1416 1441 1.725164 GCGTTCTACAGTACAGTTGGC 59.275 52.381 0.00 0.00 0.00 4.52
1477 1502 6.298853 CAGGAAATTAATTTCAACAAAGCGC 58.701 36.000 31.78 17.01 46.03 5.92
1480 1505 6.709846 TGGGCAGGAAATTAATTTCAACAAAG 59.290 34.615 31.78 19.09 46.03 2.77
1523 1548 1.283905 TGACTCAGGAGGTCGGTATCA 59.716 52.381 0.83 0.00 36.58 2.15
1540 1565 3.743396 GTCTATTCGCCCAATCAGATGAC 59.257 47.826 0.00 0.00 0.00 3.06
1588 1613 8.302057 CGTATGTAATGAACGTATTATAGCACG 58.698 37.037 0.00 6.64 43.63 5.34
1600 1625 4.723862 GCAAAGAAGCGTATGTAATGAACG 59.276 41.667 0.00 0.00 39.55 3.95
1631 1656 7.763528 TCTTGCCAATAATAATGCAACGATTTT 59.236 29.630 0.00 0.00 38.68 1.82
1632 1657 7.264221 TCTTGCCAATAATAATGCAACGATTT 58.736 30.769 0.00 0.00 38.68 2.17
1633 1658 6.804677 TCTTGCCAATAATAATGCAACGATT 58.195 32.000 0.00 0.00 38.68 3.34
1634 1659 6.389830 TCTTGCCAATAATAATGCAACGAT 57.610 33.333 0.00 0.00 38.68 3.73
1842 1874 6.822442 TGACAGGACACATACTTGAAAGTTA 58.178 36.000 0.21 0.00 40.37 2.24
1866 1898 7.119553 GCAAATCAGAGAATCAGAAAGACTTCT 59.880 37.037 0.00 0.00 42.96 2.85
1896 1928 5.395546 GGGCAAATCCATTTTATCTGAAGCA 60.396 40.000 0.00 0.00 36.21 3.91
1915 1947 1.599518 CGTAGGTGCAGTTGGGCAA 60.600 57.895 0.00 0.00 46.93 4.52
2008 2040 5.294552 GGAGTTAGCACAATACATCCAAGAC 59.705 44.000 0.00 0.00 0.00 3.01
2060 2092 3.119029 GGCAAAACCATATCAGCACACAT 60.119 43.478 0.00 0.00 38.86 3.21
2210 2242 3.069443 ACAAACGGAAACTGGCATGAAAT 59.931 39.130 0.00 0.00 0.00 2.17
2263 2295 2.689471 TGCCATTCCATATCTGTTGTGC 59.311 45.455 0.00 0.00 0.00 4.57
2334 2366 7.589958 TGGTTCTTGGCTAGAAATGTAAAAA 57.410 32.000 12.86 0.00 44.25 1.94
2390 2422 0.105039 CCCAGCGGAGTCCATTCTAC 59.895 60.000 10.49 0.00 0.00 2.59
2438 2470 5.635549 TGACTGCGATGATTAATGTAACG 57.364 39.130 0.00 0.00 0.00 3.18
2510 2542 2.161855 CCATGAGCAAAGCAAGTACCA 58.838 47.619 0.00 0.00 0.00 3.25
2755 2787 5.047092 ACCTTTTCCATGACAAAGCATAAGG 60.047 40.000 9.85 0.00 36.78 2.69
2837 2869 4.647853 AGTGTGCTGAATGCCATCATTAAT 59.352 37.500 0.00 0.00 42.60 1.40
2838 2870 4.018490 AGTGTGCTGAATGCCATCATTAA 58.982 39.130 0.00 0.00 42.60 1.40
2882 2914 3.576648 CAGAAGAAGGACGGACTGTTAC 58.423 50.000 0.00 0.00 0.00 2.50
2977 3010 7.601130 CAGGTAATACAAGTGTGTAGCTACAAA 59.399 37.037 27.61 20.57 43.42 2.83
3059 3216 3.006537 GGTTAAAAGGGGAAAGGAACTGC 59.993 47.826 0.00 0.00 40.86 4.40
3146 3303 2.168106 AGAGCCAGACACTATCAAGCTG 59.832 50.000 0.00 0.00 37.89 4.24
3176 3333 5.245751 TGCCACATGGAAATTACATCAACTT 59.754 36.000 0.87 0.00 37.39 2.66
3311 3628 1.135603 CGTGTTCTGTTCATGCCCATG 60.136 52.381 1.86 1.86 40.09 3.66
3457 3777 9.906660 AAAAGATGATAAAAGTCGCAATTTACA 57.093 25.926 0.00 0.00 0.00 2.41
3466 3786 6.033196 CAGCTGCAAAAAGATGATAAAAGTCG 59.967 38.462 0.00 0.00 35.57 4.18
3605 3925 5.697633 GCACAAGGAAATCACAACATTCAAT 59.302 36.000 0.00 0.00 0.00 2.57
3780 4100 6.092259 CAGGTACTTATTATTTAGATGCCGCC 59.908 42.308 0.00 0.00 34.60 6.13
3868 4188 3.932822 TGAAACGCCAAGCTAAGACATA 58.067 40.909 0.00 0.00 0.00 2.29
3895 4215 0.829333 AGATTCAGCGAGGCATGTCT 59.171 50.000 0.00 0.00 0.00 3.41
3960 4280 4.017126 ACTGATCACAATGTCTCCGACTA 58.983 43.478 0.00 0.00 33.15 2.59
3965 4285 4.074970 ACCAAACTGATCACAATGTCTCC 58.925 43.478 0.00 0.00 0.00 3.71
4061 4384 0.099791 CGGTGCTGTTTTGGTTCGTT 59.900 50.000 0.00 0.00 0.00 3.85
4126 4455 8.725148 ACTGTCATATCTTGTGAATGAAACTTC 58.275 33.333 0.00 0.00 31.77 3.01
4147 4476 6.060028 TCTCTAACAACAATGCAAACTGTC 57.940 37.500 0.00 0.00 0.00 3.51
4178 4507 8.743085 ATGCAACTTGTCTATCTTATGAATGT 57.257 30.769 0.00 0.00 0.00 2.71
4200 4529 3.193267 TCTGGGTTTGCTATCAACAATGC 59.807 43.478 0.00 0.00 30.75 3.56
4307 4731 0.977627 CCCTCCTTTTCCAATGGCCC 60.978 60.000 0.00 0.00 0.00 5.80
4314 4743 0.402861 ACCAGGACCCTCCTTTTCCA 60.403 55.000 0.00 0.00 46.91 3.53
4316 4745 1.423921 TGAACCAGGACCCTCCTTTTC 59.576 52.381 0.00 0.00 46.91 2.29
4325 4754 2.650322 TGTGAAAACTGAACCAGGACC 58.350 47.619 0.00 0.00 35.51 4.46
4421 4855 7.178712 ACAACTGAGTCTCAAAAAGATAACG 57.821 36.000 3.67 0.00 36.11 3.18
4447 4882 6.652900 ACTGTAAGAAAAAGAGAAGCATCTCC 59.347 38.462 15.09 0.00 45.29 3.71
4536 4971 8.736097 ATGGGTACATATTGTTGGATCTAGTA 57.264 34.615 0.00 0.00 34.99 1.82
4557 4992 9.717942 TGTTAAATCCTGAAAACAATTTATGGG 57.282 29.630 0.00 0.00 0.00 4.00
4575 5010 7.728847 AAGGAAAACTGGCAAATGTTAAATC 57.271 32.000 0.00 0.00 0.00 2.17
4584 5019 4.956075 AGAGAAGAAAGGAAAACTGGCAAA 59.044 37.500 0.00 0.00 0.00 3.68
4585 5020 4.536765 AGAGAAGAAAGGAAAACTGGCAA 58.463 39.130 0.00 0.00 0.00 4.52
4586 5021 4.137543 GAGAGAAGAAAGGAAAACTGGCA 58.862 43.478 0.00 0.00 0.00 4.92
4587 5022 3.187432 CGAGAGAAGAAAGGAAAACTGGC 59.813 47.826 0.00 0.00 0.00 4.85
4588 5023 3.187432 GCGAGAGAAGAAAGGAAAACTGG 59.813 47.826 0.00 0.00 0.00 4.00
4589 5024 3.120854 CGCGAGAGAAGAAAGGAAAACTG 60.121 47.826 0.00 0.00 0.00 3.16
4590 5025 3.060602 CGCGAGAGAAGAAAGGAAAACT 58.939 45.455 0.00 0.00 0.00 2.66
4591 5026 3.057734 TCGCGAGAGAAGAAAGGAAAAC 58.942 45.455 3.71 0.00 34.84 2.43
4592 5027 3.380479 TCGCGAGAGAAGAAAGGAAAA 57.620 42.857 3.71 0.00 34.84 2.29
4593 5028 3.380479 TTCGCGAGAGAAGAAAGGAAA 57.620 42.857 9.59 0.00 43.69 3.13
4594 5029 3.380479 TTTCGCGAGAGAAGAAAGGAA 57.620 42.857 9.59 0.00 43.69 3.36
4595 5030 3.380479 TTTTCGCGAGAGAAGAAAGGA 57.620 42.857 9.59 0.00 43.69 3.36
4619 5054 3.400054 GGAACTACCCTGCCGCCT 61.400 66.667 0.00 0.00 0.00 5.52
4622 5057 1.550130 TTGGAGGAACTACCCTGCCG 61.550 60.000 0.00 0.00 39.75 5.69
4624 5059 0.035343 GGTTGGAGGAACTACCCTGC 60.035 60.000 0.00 0.00 39.75 4.85
4630 5065 2.295602 GGGCGGGTTGGAGGAACTA 61.296 63.158 0.00 0.00 41.55 2.24
4660 5095 1.755393 GAGGGGACACACGAACCTGT 61.755 60.000 0.00 0.00 0.00 4.00
4662 5097 2.214920 GGAGGGGACACACGAACCT 61.215 63.158 0.00 0.00 0.00 3.50
4667 5102 1.000019 TAGGAGGAGGGGACACACG 60.000 63.158 0.00 0.00 0.00 4.49
4682 5117 2.125673 CCGACACGGCCAACTAGG 60.126 66.667 2.24 0.00 41.17 3.02
4696 5131 1.410004 GACCCTATCCACATCACCGA 58.590 55.000 0.00 0.00 0.00 4.69
4703 5138 0.632835 ACCCTACGACCCTATCCACA 59.367 55.000 0.00 0.00 0.00 4.17
4704 5139 1.785647 AACCCTACGACCCTATCCAC 58.214 55.000 0.00 0.00 0.00 4.02
4705 5140 2.158415 CCTAACCCTACGACCCTATCCA 60.158 54.545 0.00 0.00 0.00 3.41
4706 5141 2.158400 ACCTAACCCTACGACCCTATCC 60.158 54.545 0.00 0.00 0.00 2.59
4707 5142 3.235750 ACCTAACCCTACGACCCTATC 57.764 52.381 0.00 0.00 0.00 2.08
4708 5143 3.695357 AACCTAACCCTACGACCCTAT 57.305 47.619 0.00 0.00 0.00 2.57
4709 5144 3.473113 AAACCTAACCCTACGACCCTA 57.527 47.619 0.00 0.00 0.00 3.53
4710 5145 2.332332 AAACCTAACCCTACGACCCT 57.668 50.000 0.00 0.00 0.00 4.34
4711 5146 2.159043 GCTAAACCTAACCCTACGACCC 60.159 54.545 0.00 0.00 0.00 4.46
4712 5147 2.762887 AGCTAAACCTAACCCTACGACC 59.237 50.000 0.00 0.00 0.00 4.79
4713 5148 4.462508 AAGCTAAACCTAACCCTACGAC 57.537 45.455 0.00 0.00 0.00 4.34
4714 5149 4.774200 AGAAAGCTAAACCTAACCCTACGA 59.226 41.667 0.00 0.00 0.00 3.43
4715 5150 5.082251 AGAAAGCTAAACCTAACCCTACG 57.918 43.478 0.00 0.00 0.00 3.51
4716 5151 5.123502 GCAAGAAAGCTAAACCTAACCCTAC 59.876 44.000 0.00 0.00 0.00 3.18
4717 5152 5.250982 GCAAGAAAGCTAAACCTAACCCTA 58.749 41.667 0.00 0.00 0.00 3.53
4718 5153 4.079970 GCAAGAAAGCTAAACCTAACCCT 58.920 43.478 0.00 0.00 0.00 4.34
4719 5154 3.119955 CGCAAGAAAGCTAAACCTAACCC 60.120 47.826 0.00 0.00 43.02 4.11
4720 5155 3.119955 CCGCAAGAAAGCTAAACCTAACC 60.120 47.826 0.00 0.00 43.02 2.85
4721 5156 3.669824 GCCGCAAGAAAGCTAAACCTAAC 60.670 47.826 0.00 0.00 43.02 2.34
4722 5157 2.486592 GCCGCAAGAAAGCTAAACCTAA 59.513 45.455 0.00 0.00 43.02 2.69
4723 5158 2.081462 GCCGCAAGAAAGCTAAACCTA 58.919 47.619 0.00 0.00 43.02 3.08
4724 5159 0.881796 GCCGCAAGAAAGCTAAACCT 59.118 50.000 0.00 0.00 43.02 3.50
4725 5160 0.454452 CGCCGCAAGAAAGCTAAACC 60.454 55.000 0.00 0.00 43.02 3.27
4726 5161 0.454452 CCGCCGCAAGAAAGCTAAAC 60.454 55.000 0.00 0.00 43.02 2.01
4727 5162 1.873165 CCGCCGCAAGAAAGCTAAA 59.127 52.632 0.00 0.00 43.02 1.85
4728 5163 2.686816 GCCGCCGCAAGAAAGCTAA 61.687 57.895 0.00 0.00 43.02 3.09
4729 5164 3.124921 GCCGCCGCAAGAAAGCTA 61.125 61.111 0.00 0.00 43.02 3.32
4755 5190 3.499737 CTCAACACCGGCATCGCC 61.500 66.667 0.00 0.00 46.75 5.54
4756 5191 1.970917 CTTCTCAACACCGGCATCGC 61.971 60.000 0.00 0.00 34.56 4.58
4757 5192 0.389817 TCTTCTCAACACCGGCATCG 60.390 55.000 0.00 0.00 0.00 3.84
4758 5193 1.808411 TTCTTCTCAACACCGGCATC 58.192 50.000 0.00 0.00 0.00 3.91
4759 5194 2.496899 ATTCTTCTCAACACCGGCAT 57.503 45.000 0.00 0.00 0.00 4.40
4760 5195 3.244422 ACTTATTCTTCTCAACACCGGCA 60.244 43.478 0.00 0.00 0.00 5.69
4761 5196 3.335579 ACTTATTCTTCTCAACACCGGC 58.664 45.455 0.00 0.00 0.00 6.13
4762 5197 5.701290 AGAAACTTATTCTTCTCAACACCGG 59.299 40.000 0.00 0.00 0.00 5.28
4763 5198 6.128526 GGAGAAACTTATTCTTCTCAACACCG 60.129 42.308 12.47 0.00 46.24 4.94
4764 5199 6.937465 AGGAGAAACTTATTCTTCTCAACACC 59.063 38.462 12.47 0.00 46.24 4.16
4765 5200 7.095017 CCAGGAGAAACTTATTCTTCTCAACAC 60.095 40.741 12.47 0.00 46.24 3.32
4766 5201 6.936900 CCAGGAGAAACTTATTCTTCTCAACA 59.063 38.462 12.47 0.00 46.24 3.33
4767 5202 6.128145 GCCAGGAGAAACTTATTCTTCTCAAC 60.128 42.308 12.47 0.00 46.24 3.18
4768 5203 5.940470 GCCAGGAGAAACTTATTCTTCTCAA 59.060 40.000 12.47 0.00 46.24 3.02
4769 5204 5.249393 AGCCAGGAGAAACTTATTCTTCTCA 59.751 40.000 12.47 0.00 46.24 3.27
4770 5205 5.739959 AGCCAGGAGAAACTTATTCTTCTC 58.260 41.667 0.00 3.70 44.53 2.87
4771 5206 5.338789 GGAGCCAGGAGAAACTTATTCTTCT 60.339 44.000 0.00 0.00 34.79 2.85
4772 5207 4.878971 GGAGCCAGGAGAAACTTATTCTTC 59.121 45.833 0.00 0.00 0.00 2.87
4773 5208 4.538089 AGGAGCCAGGAGAAACTTATTCTT 59.462 41.667 0.00 0.00 0.00 2.52
4774 5209 4.107820 AGGAGCCAGGAGAAACTTATTCT 58.892 43.478 0.00 0.00 0.00 2.40
4775 5210 4.495690 AGGAGCCAGGAGAAACTTATTC 57.504 45.455 0.00 0.00 0.00 1.75
4776 5211 4.043435 ACAAGGAGCCAGGAGAAACTTATT 59.957 41.667 0.00 0.00 0.00 1.40
4777 5212 3.589288 ACAAGGAGCCAGGAGAAACTTAT 59.411 43.478 0.00 0.00 0.00 1.73
4778 5213 2.979678 ACAAGGAGCCAGGAGAAACTTA 59.020 45.455 0.00 0.00 0.00 2.24
4779 5214 1.777272 ACAAGGAGCCAGGAGAAACTT 59.223 47.619 0.00 0.00 0.00 2.66
4780 5215 1.349357 GACAAGGAGCCAGGAGAAACT 59.651 52.381 0.00 0.00 0.00 2.66
4781 5216 1.611936 GGACAAGGAGCCAGGAGAAAC 60.612 57.143 0.00 0.00 0.00 2.78
4782 5217 0.693049 GGACAAGGAGCCAGGAGAAA 59.307 55.000 0.00 0.00 0.00 2.52
4783 5218 0.473694 TGGACAAGGAGCCAGGAGAA 60.474 55.000 0.00 0.00 0.00 2.87
4784 5219 1.158466 TGGACAAGGAGCCAGGAGA 59.842 57.895 0.00 0.00 0.00 3.71
4785 5220 1.298014 GTGGACAAGGAGCCAGGAG 59.702 63.158 0.00 0.00 34.22 3.69
4786 5221 2.224159 GGTGGACAAGGAGCCAGGA 61.224 63.158 0.00 0.00 34.22 3.86
4787 5222 2.190488 GAGGTGGACAAGGAGCCAGG 62.190 65.000 0.00 0.00 34.22 4.45
4788 5223 1.298014 GAGGTGGACAAGGAGCCAG 59.702 63.158 0.00 0.00 34.22 4.85
4789 5224 2.583441 CGAGGTGGACAAGGAGCCA 61.583 63.158 0.00 0.00 0.00 4.75
4790 5225 2.266055 CGAGGTGGACAAGGAGCC 59.734 66.667 0.00 0.00 0.00 4.70
4791 5226 2.435059 GCGAGGTGGACAAGGAGC 60.435 66.667 0.00 0.00 0.00 4.70
4792 5227 2.266055 GGCGAGGTGGACAAGGAG 59.734 66.667 0.00 0.00 0.00 3.69
4793 5228 3.691342 CGGCGAGGTGGACAAGGA 61.691 66.667 0.00 0.00 0.00 3.36
4794 5229 3.234630 TTCGGCGAGGTGGACAAGG 62.235 63.158 10.46 0.00 0.00 3.61
4795 5230 1.738099 CTTCGGCGAGGTGGACAAG 60.738 63.158 10.46 0.00 0.00 3.16
4796 5231 2.342279 CTTCGGCGAGGTGGACAA 59.658 61.111 10.46 0.00 0.00 3.18
4797 5232 3.691342 CCTTCGGCGAGGTGGACA 61.691 66.667 17.96 0.00 31.89 4.02
4809 5244 3.870606 ACGATGAAACCGCCTTCG 58.129 55.556 0.00 0.00 37.27 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.