Multiple sequence alignment - TraesCS3A01G126800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G126800 chr3A 100.000 7214 0 0 1 7214 102274409 102281622 0.000000e+00 13322.0
1 TraesCS3A01G126800 chr3A 76.655 1752 300 65 1023 2706 102359782 102361492 0.000000e+00 869.0
2 TraesCS3A01G126800 chr3A 89.114 395 24 9 5498 5877 101886875 101886485 2.360000e-129 473.0
3 TraesCS3A01G126800 chr3A 78.321 655 99 20 1016 1658 101891512 101890889 4.080000e-102 383.0
4 TraesCS3A01G126800 chr3A 75.292 514 81 32 1942 2446 101890772 101890296 3.410000e-48 204.0
5 TraesCS3A01G126800 chr3A 79.787 282 40 13 5610 5876 101866554 101866275 9.550000e-44 189.0
6 TraesCS3A01G126800 chr3A 81.457 151 16 7 6154 6297 101880574 101880429 5.910000e-21 113.0
7 TraesCS3A01G126800 chr3A 82.418 91 15 1 475 564 101892268 101892178 2.160000e-10 78.7
8 TraesCS3A01G126800 chr3B 93.155 3331 144 37 1370 4679 134968140 134971407 0.000000e+00 4811.0
9 TraesCS3A01G126800 chr3B 92.928 3337 146 41 1370 4679 135001559 134998286 0.000000e+00 4772.0
10 TraesCS3A01G126800 chr3B 94.615 1764 75 8 4678 6426 134971511 134973269 0.000000e+00 2713.0
11 TraesCS3A01G126800 chr3B 94.334 1765 79 9 4678 6426 134998182 134996423 0.000000e+00 2686.0
12 TraesCS3A01G126800 chr3B 88.140 1855 153 30 1016 2831 131054919 131056745 0.000000e+00 2145.0
13 TraesCS3A01G126800 chr3B 90.967 786 39 11 233 1014 135002979 135002222 0.000000e+00 1029.0
14 TraesCS3A01G126800 chr3B 90.278 792 46 10 227 1014 134966713 134967477 0.000000e+00 1007.0
15 TraesCS3A01G126800 chr3B 87.007 862 93 8 3327 4172 131060392 131061250 0.000000e+00 953.0
16 TraesCS3A01G126800 chr3B 84.662 991 101 26 5498 6450 131062869 131063846 0.000000e+00 941.0
17 TraesCS3A01G126800 chr3B 86.643 861 82 18 4533 5385 131061859 131062694 0.000000e+00 922.0
18 TraesCS3A01G126800 chr3B 77.437 1467 236 55 1022 2446 135709032 135710445 0.000000e+00 787.0
19 TraesCS3A01G126800 chr3B 78.412 1209 190 39 1243 2414 135680323 135681497 0.000000e+00 721.0
20 TraesCS3A01G126800 chr3B 77.393 1327 205 57 1161 2446 135806114 135807386 0.000000e+00 701.0
21 TraesCS3A01G126800 chr3B 98.165 327 6 0 1016 1342 134967816 134968142 8.120000e-159 571.0
22 TraesCS3A01G126800 chr3B 97.859 327 7 0 1016 1342 135001883 135001557 3.780000e-157 566.0
23 TraesCS3A01G126800 chr3B 88.164 414 34 6 5498 5898 133812029 133811618 5.060000e-131 479.0
24 TraesCS3A01G126800 chr3B 87.831 378 31 10 6832 7198 134989847 134989474 5.170000e-116 429.0
25 TraesCS3A01G126800 chr3B 86.842 380 33 11 6832 7198 134979844 134980219 6.740000e-110 409.0
26 TraesCS3A01G126800 chr3B 81.116 466 65 20 5498 5943 133802775 133802313 1.150000e-92 351.0
27 TraesCS3A01G126800 chr3B 85.778 225 29 2 1406 1630 133816551 133816330 1.210000e-57 235.0
28 TraesCS3A01G126800 chr3B 90.625 96 8 1 4246 4341 131061636 131061730 7.600000e-25 126.0
29 TraesCS3A01G126800 chr3B 78.241 216 30 13 6092 6307 136079815 136080013 9.830000e-24 122.0
30 TraesCS3A01G126800 chr3B 82.119 151 15 8 6154 6297 133811148 133811003 1.270000e-22 119.0
31 TraesCS3A01G126800 chr3B 91.566 83 7 0 6421 6503 134978503 134978585 1.640000e-21 115.0
32 TraesCS3A01G126800 chr3B 89.888 89 9 0 6421 6509 134991188 134991100 1.640000e-21 115.0
33 TraesCS3A01G126800 chr3B 81.720 93 17 0 475 567 133817924 133817832 2.160000e-10 78.7
34 TraesCS3A01G126800 chr3D 96.673 1653 43 7 1016 2667 85399703 85401344 0.000000e+00 2737.0
35 TraesCS3A01G126800 chr3D 94.353 1576 63 9 4168 5728 85402851 85404415 0.000000e+00 2394.0
36 TraesCS3A01G126800 chr3D 95.492 1220 50 3 2947 4164 85401533 85402749 0.000000e+00 1943.0
37 TraesCS3A01G126800 chr3D 89.474 817 38 23 227 1016 85398563 85399358 0.000000e+00 989.0
38 TraesCS3A01G126800 chr3D 78.178 1471 225 59 1022 2446 85587463 85588883 0.000000e+00 850.0
39 TraesCS3A01G126800 chr3D 77.946 1256 202 40 1022 2234 85443369 85444592 0.000000e+00 715.0
40 TraesCS3A01G126800 chr3D 79.438 783 91 51 5498 6243 85250292 85251041 2.340000e-134 490.0
41 TraesCS3A01G126800 chr3D 88.550 393 30 7 5498 5877 84905617 84905227 5.100000e-126 462.0
42 TraesCS3A01G126800 chr3D 89.736 341 30 3 6878 7214 85404491 85404830 1.440000e-116 431.0
43 TraesCS3A01G126800 chr3D 82.077 491 60 14 5498 5961 85592214 85592703 1.890000e-105 394.0
44 TraesCS3A01G126800 chr3D 84.235 425 42 10 5498 5897 85888285 85888709 2.440000e-104 390.0
45 TraesCS3A01G126800 chr3D 78.116 658 89 26 1016 1648 85238253 85238880 4.110000e-97 366.0
46 TraesCS3A01G126800 chr3D 81.602 462 63 17 5498 5942 84896928 84896472 5.320000e-96 363.0
47 TraesCS3A01G126800 chr3D 90.272 257 23 1 5495 5749 85449117 85449373 1.160000e-87 335.0
48 TraesCS3A01G126800 chr3D 77.222 180 34 5 6128 6307 85888952 85889124 1.660000e-16 99.0
49 TraesCS3A01G126800 chr3D 89.333 75 8 0 6154 6228 84904721 84904647 2.140000e-15 95.3
50 TraesCS3A01G126800 chr3D 95.349 43 2 0 6737 6779 85404449 85404491 1.300000e-07 69.4
51 TraesCS3A01G126800 chr5A 84.099 283 32 8 5038 5312 658996277 658996554 2.000000e-65 261.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G126800 chr3A 102274409 102281622 7213 False 13322.000000 13322 100.000000 1 7214 1 chr3A.!!$F1 7213
1 TraesCS3A01G126800 chr3A 102359782 102361492 1710 False 869.000000 869 76.655000 1023 2706 1 chr3A.!!$F2 1683
2 TraesCS3A01G126800 chr3A 101886485 101892268 5783 True 284.675000 473 81.286250 475 5877 4 chr3A.!!$R3 5402
3 TraesCS3A01G126800 chr3B 134966713 134973269 6556 False 2275.500000 4811 94.053250 227 6426 4 chr3B.!!$F6 6199
4 TraesCS3A01G126800 chr3B 134996423 135002979 6556 True 2263.250000 4772 94.022000 233 6426 4 chr3B.!!$R5 6193
5 TraesCS3A01G126800 chr3B 131054919 131063846 8927 False 1017.400000 2145 87.415400 1016 6450 5 chr3B.!!$F5 5434
6 TraesCS3A01G126800 chr3B 135709032 135710445 1413 False 787.000000 787 77.437000 1022 2446 1 chr3B.!!$F2 1424
7 TraesCS3A01G126800 chr3B 135680323 135681497 1174 False 721.000000 721 78.412000 1243 2414 1 chr3B.!!$F1 1171
8 TraesCS3A01G126800 chr3B 135806114 135807386 1272 False 701.000000 701 77.393000 1161 2446 1 chr3B.!!$F3 1285
9 TraesCS3A01G126800 chr3B 133811003 133812029 1026 True 299.000000 479 85.141500 5498 6297 2 chr3B.!!$R2 799
10 TraesCS3A01G126800 chr3B 134989474 134991188 1714 True 272.000000 429 88.859500 6421 7198 2 chr3B.!!$R4 777
11 TraesCS3A01G126800 chr3B 134978503 134980219 1716 False 262.000000 409 89.204000 6421 7198 2 chr3B.!!$F7 777
12 TraesCS3A01G126800 chr3D 85398563 85404830 6267 False 1427.233333 2737 93.512833 227 7214 6 chr3D.!!$F5 6987
13 TraesCS3A01G126800 chr3D 85443369 85444592 1223 False 715.000000 715 77.946000 1022 2234 1 chr3D.!!$F3 1212
14 TraesCS3A01G126800 chr3D 85587463 85592703 5240 False 622.000000 850 80.127500 1022 5961 2 chr3D.!!$F6 4939
15 TraesCS3A01G126800 chr3D 85250292 85251041 749 False 490.000000 490 79.438000 5498 6243 1 chr3D.!!$F2 745
16 TraesCS3A01G126800 chr3D 85238253 85238880 627 False 366.000000 366 78.116000 1016 1648 1 chr3D.!!$F1 632
17 TraesCS3A01G126800 chr3D 84904647 84905617 970 True 278.650000 462 88.941500 5498 6228 2 chr3D.!!$R2 730
18 TraesCS3A01G126800 chr3D 85888285 85889124 839 False 244.500000 390 80.728500 5498 6307 2 chr3D.!!$F7 809

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
96 97 0.038251 TGATTCTCTCGCGCTTGTGT 60.038 50.000 5.56 0.00 0.00 3.72 F
215 216 0.235926 GCAAGACACGGAAAGAGCAC 59.764 55.000 0.00 0.00 0.00 4.40 F
216 217 0.508641 CAAGACACGGAAAGAGCACG 59.491 55.000 0.00 0.00 0.00 5.34 F
2167 2753 0.305922 GTCATCGCTGCCATGCTTAC 59.694 55.000 2.12 0.00 0.00 2.34 F
3098 6729 2.032030 AGAATGTTCACGTTCCTTTGCG 60.032 45.455 8.07 0.00 41.55 4.85 F
3532 7525 0.179004 ACGCCAATTCCAACTGTCCA 60.179 50.000 0.00 0.00 0.00 4.02 F
4152 8602 1.280133 AGCATCATGTACAGGCTGTGT 59.720 47.619 29.65 12.82 43.86 3.72 F
5914 11538 0.401356 TGAGTGCCTCCAAATGCTGA 59.599 50.000 0.50 0.00 0.00 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2023 2608 0.534412 CACTCAGCAGGGGAGTAGTG 59.466 60.000 0.00 0.00 43.47 2.74 R
2115 2701 6.653989 AGAGTAGGGAAAATCAACACATAGG 58.346 40.000 0.00 0.00 0.00 2.57 R
2193 2779 7.994911 AGAGGATTATGCAATAGAATGTTCACA 59.005 33.333 0.00 0.00 0.00 3.58 R
3153 6877 0.107703 TGGAGAAATGCTGCTACCCG 60.108 55.000 0.00 0.00 35.71 5.28 R
4018 8460 0.522915 GATTTGCTTCAGCGCTCTGC 60.523 55.000 7.13 13.09 45.83 4.26 R
5474 10814 0.994247 TGCAGATGGAGGTGGAACAT 59.006 50.000 0.00 0.00 44.52 2.71 R
5986 11866 1.037030 AGGGGTGTGCATTAATGGCG 61.037 55.000 17.02 0.00 0.00 5.69 R
7130 14241 0.394938 TGAAGGTGTAGAAGCGGCAA 59.605 50.000 1.45 0.00 0.00 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.910585 CTATGACGTGGGCGCCCC 62.911 72.222 41.75 30.19 45.71 5.80
41 42 3.702555 GCACCAGCGTGACACGTC 61.703 66.667 27.32 19.39 44.73 4.34
42 43 3.036084 CACCAGCGTGACACGTCC 61.036 66.667 27.32 13.08 44.73 4.79
43 44 3.224324 ACCAGCGTGACACGTCCT 61.224 61.111 27.32 15.12 44.73 3.85
44 45 2.734723 CCAGCGTGACACGTCCTG 60.735 66.667 27.32 24.10 44.73 3.86
45 46 2.335011 CAGCGTGACACGTCCTGA 59.665 61.111 27.32 0.00 44.73 3.86
46 47 1.080501 CAGCGTGACACGTCCTGAT 60.081 57.895 27.32 6.08 44.73 2.90
47 48 1.073216 CAGCGTGACACGTCCTGATC 61.073 60.000 27.32 10.25 44.73 2.92
48 49 1.213013 GCGTGACACGTCCTGATCT 59.787 57.895 27.32 0.00 44.73 2.75
49 50 0.798771 GCGTGACACGTCCTGATCTC 60.799 60.000 27.32 5.36 44.73 2.75
50 51 0.179161 CGTGACACGTCCTGATCTCC 60.179 60.000 19.77 0.00 36.74 3.71
51 52 0.888619 GTGACACGTCCTGATCTCCA 59.111 55.000 0.00 0.00 0.00 3.86
52 53 0.888619 TGACACGTCCTGATCTCCAC 59.111 55.000 0.00 0.00 0.00 4.02
53 54 0.173708 GACACGTCCTGATCTCCACC 59.826 60.000 0.00 0.00 0.00 4.61
54 55 1.258445 ACACGTCCTGATCTCCACCC 61.258 60.000 0.00 0.00 0.00 4.61
55 56 2.052690 ACGTCCTGATCTCCACCCG 61.053 63.158 0.00 0.00 0.00 5.28
56 57 2.501610 GTCCTGATCTCCACCCGC 59.498 66.667 0.00 0.00 0.00 6.13
57 58 2.764128 TCCTGATCTCCACCCGCC 60.764 66.667 0.00 0.00 0.00 6.13
58 59 4.227134 CCTGATCTCCACCCGCCG 62.227 72.222 0.00 0.00 0.00 6.46
59 60 3.461773 CTGATCTCCACCCGCCGT 61.462 66.667 0.00 0.00 0.00 5.68
60 61 3.723235 CTGATCTCCACCCGCCGTG 62.723 68.421 0.00 0.00 42.62 4.94
61 62 3.458163 GATCTCCACCCGCCGTGA 61.458 66.667 2.68 0.00 46.20 4.35
62 63 3.000819 ATCTCCACCCGCCGTGAA 61.001 61.111 2.68 0.00 46.20 3.18
63 64 3.310860 ATCTCCACCCGCCGTGAAC 62.311 63.158 2.68 0.00 46.20 3.18
70 71 4.308458 CCGCCGTGAACCCACTCA 62.308 66.667 0.00 0.00 41.06 3.41
71 72 3.041940 CGCCGTGAACCCACTCAC 61.042 66.667 0.00 0.00 41.98 3.51
72 73 2.426023 GCCGTGAACCCACTCACT 59.574 61.111 2.57 0.00 43.01 3.41
73 74 1.961277 GCCGTGAACCCACTCACTG 60.961 63.158 2.57 0.00 43.01 3.66
74 75 1.745890 CCGTGAACCCACTCACTGA 59.254 57.895 2.57 0.00 43.01 3.41
75 76 0.600255 CCGTGAACCCACTCACTGAC 60.600 60.000 2.57 0.00 43.01 3.51
76 77 0.104120 CGTGAACCCACTCACTGACA 59.896 55.000 2.57 0.00 43.01 3.58
77 78 1.270305 CGTGAACCCACTCACTGACAT 60.270 52.381 2.57 0.00 43.01 3.06
78 79 2.146342 GTGAACCCACTCACTGACATG 58.854 52.381 0.00 0.00 42.11 3.21
79 80 2.046292 TGAACCCACTCACTGACATGA 58.954 47.619 0.00 0.00 0.00 3.07
80 81 2.639347 TGAACCCACTCACTGACATGAT 59.361 45.455 0.00 0.00 0.00 2.45
81 82 3.072915 TGAACCCACTCACTGACATGATT 59.927 43.478 0.00 0.00 0.00 2.57
82 83 3.340814 ACCCACTCACTGACATGATTC 57.659 47.619 0.00 0.00 0.00 2.52
83 84 2.909006 ACCCACTCACTGACATGATTCT 59.091 45.455 0.00 0.00 0.00 2.40
84 85 3.055530 ACCCACTCACTGACATGATTCTC 60.056 47.826 0.00 0.00 0.00 2.87
85 86 3.197333 CCCACTCACTGACATGATTCTCT 59.803 47.826 0.00 0.00 0.00 3.10
86 87 4.431809 CCACTCACTGACATGATTCTCTC 58.568 47.826 0.00 0.00 0.00 3.20
87 88 4.104066 CACTCACTGACATGATTCTCTCG 58.896 47.826 0.00 0.00 0.00 4.04
88 89 3.114809 CTCACTGACATGATTCTCTCGC 58.885 50.000 0.00 0.00 0.00 5.03
89 90 1.851053 CACTGACATGATTCTCTCGCG 59.149 52.381 0.00 0.00 0.00 5.87
90 91 0.851495 CTGACATGATTCTCTCGCGC 59.149 55.000 0.00 0.00 0.00 6.86
91 92 0.457443 TGACATGATTCTCTCGCGCT 59.543 50.000 5.56 0.00 0.00 5.92
92 93 1.134995 TGACATGATTCTCTCGCGCTT 60.135 47.619 5.56 0.00 0.00 4.68
93 94 1.257415 GACATGATTCTCTCGCGCTTG 59.743 52.381 5.56 0.00 0.00 4.01
94 95 1.284657 CATGATTCTCTCGCGCTTGT 58.715 50.000 5.56 0.00 0.00 3.16
95 96 1.005242 CATGATTCTCTCGCGCTTGTG 60.005 52.381 5.56 0.00 0.00 3.33
96 97 0.038251 TGATTCTCTCGCGCTTGTGT 60.038 50.000 5.56 0.00 0.00 3.72
97 98 0.368227 GATTCTCTCGCGCTTGTGTG 59.632 55.000 5.56 0.00 0.00 3.82
98 99 0.319900 ATTCTCTCGCGCTTGTGTGT 60.320 50.000 5.56 0.00 0.00 3.72
99 100 0.939577 TTCTCTCGCGCTTGTGTGTC 60.940 55.000 5.56 0.00 0.00 3.67
100 101 2.355837 TCTCGCGCTTGTGTGTCC 60.356 61.111 5.56 0.00 0.00 4.02
101 102 3.414700 CTCGCGCTTGTGTGTCCC 61.415 66.667 5.56 0.00 0.00 4.46
107 108 3.041940 CTTGTGTGTCCCGCGGTC 61.042 66.667 26.12 17.15 0.00 4.79
108 109 3.800685 CTTGTGTGTCCCGCGGTCA 62.801 63.158 26.12 19.68 0.00 4.02
109 110 3.171828 TTGTGTGTCCCGCGGTCAT 62.172 57.895 26.12 0.00 0.00 3.06
110 111 2.358247 GTGTGTCCCGCGGTCATT 60.358 61.111 26.12 0.00 0.00 2.57
111 112 2.358125 TGTGTCCCGCGGTCATTG 60.358 61.111 26.12 8.39 0.00 2.82
112 113 3.799755 GTGTCCCGCGGTCATTGC 61.800 66.667 26.12 7.57 0.00 3.56
120 121 4.715523 CGGTCATTGCGGGTGGGT 62.716 66.667 0.00 0.00 0.00 4.51
121 122 2.750237 GGTCATTGCGGGTGGGTC 60.750 66.667 0.00 0.00 0.00 4.46
122 123 2.750237 GTCATTGCGGGTGGGTCC 60.750 66.667 0.00 0.00 0.00 4.46
130 131 4.391869 GGGTGGGTCCGAAAACTC 57.608 61.111 0.00 0.00 37.00 3.01
131 132 1.303074 GGGTGGGTCCGAAAACTCC 60.303 63.158 0.00 0.00 37.00 3.85
132 133 1.670083 GGTGGGTCCGAAAACTCCG 60.670 63.158 0.00 0.00 0.00 4.63
133 134 1.368579 GTGGGTCCGAAAACTCCGA 59.631 57.895 0.00 0.00 0.00 4.55
134 135 0.669625 GTGGGTCCGAAAACTCCGAG 60.670 60.000 0.00 0.00 0.00 4.63
135 136 1.117142 TGGGTCCGAAAACTCCGAGT 61.117 55.000 0.00 0.00 0.00 4.18
136 137 0.389556 GGGTCCGAAAACTCCGAGTC 60.390 60.000 0.35 0.00 0.00 3.36
137 138 0.316204 GGTCCGAAAACTCCGAGTCA 59.684 55.000 0.35 0.00 0.00 3.41
138 139 1.669211 GGTCCGAAAACTCCGAGTCAG 60.669 57.143 0.35 0.00 0.00 3.51
139 140 1.268899 GTCCGAAAACTCCGAGTCAGA 59.731 52.381 0.35 0.00 0.00 3.27
140 141 2.094649 GTCCGAAAACTCCGAGTCAGAT 60.095 50.000 0.35 0.00 0.00 2.90
141 142 2.094700 TCCGAAAACTCCGAGTCAGATG 60.095 50.000 0.35 0.00 0.00 2.90
142 143 2.263077 CGAAAACTCCGAGTCAGATGG 58.737 52.381 0.35 0.00 0.00 3.51
143 144 2.622436 GAAAACTCCGAGTCAGATGGG 58.378 52.381 0.35 0.00 0.00 4.00
144 145 1.645710 AAACTCCGAGTCAGATGGGT 58.354 50.000 0.35 0.00 0.00 4.51
145 146 1.645710 AACTCCGAGTCAGATGGGTT 58.354 50.000 0.35 0.00 0.00 4.11
146 147 1.645710 ACTCCGAGTCAGATGGGTTT 58.354 50.000 0.00 0.00 0.00 3.27
147 148 2.816411 ACTCCGAGTCAGATGGGTTTA 58.184 47.619 0.00 0.00 0.00 2.01
148 149 2.496470 ACTCCGAGTCAGATGGGTTTAC 59.504 50.000 0.00 0.00 0.00 2.01
149 150 2.761208 CTCCGAGTCAGATGGGTTTACT 59.239 50.000 0.00 0.00 0.00 2.24
150 151 2.758979 TCCGAGTCAGATGGGTTTACTC 59.241 50.000 0.00 0.00 34.55 2.59
151 152 2.159085 CCGAGTCAGATGGGTTTACTCC 60.159 54.545 0.00 0.00 34.42 3.85
158 159 3.291611 GGGTTTACTCCCGAGCGA 58.708 61.111 0.00 0.00 37.93 4.93
159 160 1.153686 GGGTTTACTCCCGAGCGAC 60.154 63.158 0.00 0.00 37.93 5.19
160 161 1.153686 GGTTTACTCCCGAGCGACC 60.154 63.158 0.00 0.00 0.00 4.79
161 162 1.588082 GTTTACTCCCGAGCGACCA 59.412 57.895 0.00 0.00 0.00 4.02
162 163 0.458025 GTTTACTCCCGAGCGACCAG 60.458 60.000 0.00 0.00 0.00 4.00
163 164 0.896940 TTTACTCCCGAGCGACCAGT 60.897 55.000 0.00 0.00 0.00 4.00
164 165 0.896940 TTACTCCCGAGCGACCAGTT 60.897 55.000 0.00 0.00 0.00 3.16
165 166 1.310933 TACTCCCGAGCGACCAGTTC 61.311 60.000 0.00 0.00 0.00 3.01
166 167 3.358076 CTCCCGAGCGACCAGTTCC 62.358 68.421 0.00 0.00 0.00 3.62
167 168 4.796231 CCCGAGCGACCAGTTCCG 62.796 72.222 0.00 0.00 0.00 4.30
168 169 4.796231 CCGAGCGACCAGTTCCGG 62.796 72.222 0.00 0.00 0.00 5.14
169 170 4.796231 CGAGCGACCAGTTCCGGG 62.796 72.222 0.00 0.00 0.00 5.73
170 171 3.692406 GAGCGACCAGTTCCGGGT 61.692 66.667 0.00 0.00 42.61 5.28
171 172 3.934391 GAGCGACCAGTTCCGGGTG 62.934 68.421 0.00 0.00 39.19 4.61
173 174 4.308458 CGACCAGTTCCGGGTGCA 62.308 66.667 0.00 0.00 39.19 4.57
174 175 2.668550 GACCAGTTCCGGGTGCAC 60.669 66.667 8.80 8.80 39.19 4.57
175 176 4.265056 ACCAGTTCCGGGTGCACC 62.265 66.667 28.57 28.57 37.23 5.01
184 185 4.446413 GGGTGCACCGGGTCTACG 62.446 72.222 29.08 0.00 36.71 3.51
186 187 4.367023 GTGCACCGGGTCTACGCA 62.367 66.667 5.22 5.86 0.00 5.24
187 188 4.367023 TGCACCGGGTCTACGCAC 62.367 66.667 6.32 0.00 0.00 5.34
207 208 4.329545 GCAGGGGCAAGACACGGA 62.330 66.667 0.00 0.00 40.72 4.69
208 209 2.429930 CAGGGGCAAGACACGGAA 59.570 61.111 0.00 0.00 0.00 4.30
209 210 1.228124 CAGGGGCAAGACACGGAAA 60.228 57.895 0.00 0.00 0.00 3.13
210 211 1.073199 AGGGGCAAGACACGGAAAG 59.927 57.895 0.00 0.00 0.00 2.62
211 212 1.072505 GGGGCAAGACACGGAAAGA 59.927 57.895 0.00 0.00 0.00 2.52
212 213 0.955919 GGGGCAAGACACGGAAAGAG 60.956 60.000 0.00 0.00 0.00 2.85
213 214 1.578206 GGGCAAGACACGGAAAGAGC 61.578 60.000 0.00 0.00 0.00 4.09
214 215 0.884704 GGCAAGACACGGAAAGAGCA 60.885 55.000 0.00 0.00 0.00 4.26
215 216 0.235926 GCAAGACACGGAAAGAGCAC 59.764 55.000 0.00 0.00 0.00 4.40
216 217 0.508641 CAAGACACGGAAAGAGCACG 59.491 55.000 0.00 0.00 0.00 5.34
217 218 1.222115 AAGACACGGAAAGAGCACGC 61.222 55.000 0.00 0.00 0.00 5.34
218 219 3.000080 GACACGGAAAGAGCACGCG 62.000 63.158 3.53 3.53 0.00 6.01
219 220 4.430423 CACGGAAAGAGCACGCGC 62.430 66.667 5.73 0.00 38.99 6.86
220 221 4.961511 ACGGAAAGAGCACGCGCA 62.962 61.111 5.73 0.00 42.27 6.09
221 222 4.139420 CGGAAAGAGCACGCGCAG 62.139 66.667 5.73 0.00 42.27 5.18
222 223 3.044305 GGAAAGAGCACGCGCAGT 61.044 61.111 5.73 3.19 42.27 4.40
255 256 2.080336 CTGAAAACCCCAGCTCCCCA 62.080 60.000 0.00 0.00 0.00 4.96
256 257 1.304464 GAAAACCCCAGCTCCCCAG 60.304 63.158 0.00 0.00 0.00 4.45
441 459 1.211456 CATCCCTTCCTCTCTGCCTT 58.789 55.000 0.00 0.00 0.00 4.35
473 491 2.141517 GCATTCCTGACCGAGATCATG 58.858 52.381 0.00 0.00 0.00 3.07
518 536 4.166888 GCTCTCCTGATGGCGGCA 62.167 66.667 16.34 16.34 0.00 5.69
566 584 1.483004 GGTAGCACTTTCTCCTCCTCC 59.517 57.143 0.00 0.00 0.00 4.30
579 597 3.878667 CCTCCCCGCCTCAATCCC 61.879 72.222 0.00 0.00 0.00 3.85
580 598 2.770048 CTCCCCGCCTCAATCCCT 60.770 66.667 0.00 0.00 0.00 4.20
581 599 2.768344 TCCCCGCCTCAATCCCTC 60.768 66.667 0.00 0.00 0.00 4.30
582 600 4.241555 CCCCGCCTCAATCCCTCG 62.242 72.222 0.00 0.00 0.00 4.63
583 601 4.918201 CCCGCCTCAATCCCTCGC 62.918 72.222 0.00 0.00 0.00 5.03
584 602 4.161295 CCGCCTCAATCCCTCGCA 62.161 66.667 0.00 0.00 0.00 5.10
585 603 2.109799 CGCCTCAATCCCTCGCAT 59.890 61.111 0.00 0.00 0.00 4.73
586 604 2.249535 CGCCTCAATCCCTCGCATG 61.250 63.158 0.00 0.00 0.00 4.06
587 605 2.550101 GCCTCAATCCCTCGCATGC 61.550 63.158 7.91 7.91 0.00 4.06
588 606 1.147824 CCTCAATCCCTCGCATGCT 59.852 57.895 17.13 0.00 0.00 3.79
589 607 0.883814 CCTCAATCCCTCGCATGCTC 60.884 60.000 17.13 0.00 0.00 4.26
590 608 0.883814 CTCAATCCCTCGCATGCTCC 60.884 60.000 17.13 0.00 0.00 4.70
591 609 1.147824 CAATCCCTCGCATGCTCCT 59.852 57.895 17.13 0.00 0.00 3.69
592 610 1.147824 AATCCCTCGCATGCTCCTG 59.852 57.895 17.13 0.00 0.00 3.86
593 611 1.630126 AATCCCTCGCATGCTCCTGT 61.630 55.000 17.13 0.00 0.00 4.00
594 612 2.037620 ATCCCTCGCATGCTCCTGTC 62.038 60.000 17.13 0.00 0.00 3.51
595 613 2.202987 CCTCGCATGCTCCTGTCC 60.203 66.667 17.13 0.00 0.00 4.02
615 633 3.826157 TCCGTGCATTTTCCTCATTTCTT 59.174 39.130 0.00 0.00 0.00 2.52
622 640 5.564651 GCATTTTCCTCATTTCTTCCGTTCA 60.565 40.000 0.00 0.00 0.00 3.18
629 647 5.348997 CCTCATTTCTTCCGTTCAAGTCTAC 59.651 44.000 0.00 0.00 0.00 2.59
707 728 2.280186 GAGGCGCCTAACCATCCG 60.280 66.667 32.97 0.00 0.00 4.18
755 776 6.545504 TGCTTATCGGATTCTATTTTCTGC 57.454 37.500 0.00 0.00 0.00 4.26
793 819 5.884232 TCTTGATTTGTCAGATGCTATGCTT 59.116 36.000 0.00 0.00 0.00 3.91
794 820 6.376299 TCTTGATTTGTCAGATGCTATGCTTT 59.624 34.615 0.00 0.00 0.00 3.51
795 821 5.886992 TGATTTGTCAGATGCTATGCTTTG 58.113 37.500 0.00 0.00 0.00 2.77
920 1021 1.062121 TCTCCCTCCTGAAATCCGGAT 60.062 52.381 12.38 12.38 0.00 4.18
1364 1851 4.884668 TCTCCAAGATGGTCGTTTTACT 57.115 40.909 0.00 0.00 39.03 2.24
1365 1852 5.988310 TCTCCAAGATGGTCGTTTTACTA 57.012 39.130 0.00 0.00 39.03 1.82
1366 1853 5.962433 TCTCCAAGATGGTCGTTTTACTAG 58.038 41.667 0.00 0.00 39.03 2.57
1596 2118 5.001232 GGACCACCACGCAAATGTATATAT 58.999 41.667 0.00 0.00 35.97 0.86
1597 2119 6.167685 GGACCACCACGCAAATGTATATATA 58.832 40.000 0.00 0.00 35.97 0.86
1673 2195 8.685838 ATTGTTAGTTTGCCAACTAGTTAGAA 57.314 30.769 8.04 0.00 44.64 2.10
1686 2208 2.490991 AGTTAGAAGACGTGGGCAAAC 58.509 47.619 0.00 0.00 0.00 2.93
1691 2213 1.336755 GAAGACGTGGGCAAACATGTT 59.663 47.619 4.92 4.92 40.49 2.71
1711 2233 2.516227 TTGTCCTGGGTGTGTTTTGA 57.484 45.000 0.00 0.00 0.00 2.69
1805 2336 4.232188 AGTGTGATTGATTGATGGAGCT 57.768 40.909 0.00 0.00 0.00 4.09
2023 2608 4.516698 CCTAACATCATTATCAGTGGTGCC 59.483 45.833 0.00 0.00 30.82 5.01
2087 2672 5.982356 AGTGCATGAAGCTACTCATTAAGA 58.018 37.500 0.00 0.00 45.94 2.10
2167 2753 0.305922 GTCATCGCTGCCATGCTTAC 59.694 55.000 2.12 0.00 0.00 2.34
2193 2779 4.334759 GCTGATGTGCATTGAGATAACACT 59.665 41.667 0.00 0.00 32.49 3.55
2194 2780 5.729732 GCTGATGTGCATTGAGATAACACTG 60.730 44.000 0.00 0.00 32.49 3.66
2367 2955 4.613944 TCCCGATGATGTATGTTTCGTAC 58.386 43.478 0.00 0.00 0.00 3.67
2389 2978 9.554724 CGTACATTTTCTGTATATTTTGCTGTT 57.445 29.630 0.00 0.00 42.21 3.16
2391 2981 8.986477 ACATTTTCTGTATATTTTGCTGTTCC 57.014 30.769 0.00 0.00 35.91 3.62
2652 3280 3.062889 TCCACATCCACCATTGGGATAT 58.937 45.455 7.78 0.00 43.24 1.63
2784 3499 7.863375 GCAGTATGGAAGTATCTACTGTAACTG 59.137 40.741 9.53 0.00 41.87 3.16
2785 3500 8.904834 CAGTATGGAAGTATCTACTGTAACTGT 58.095 37.037 0.00 0.00 37.41 3.55
2799 3514 2.295253 AACTGTGAGTATGTAGCGGC 57.705 50.000 0.00 0.00 0.00 6.53
2809 3524 2.949177 ATGTAGCGGCATTATGGGAA 57.051 45.000 1.45 0.00 0.00 3.97
2912 6500 3.243873 TGTGATGTCTGAGTCTTGTGGTC 60.244 47.826 0.00 0.00 0.00 4.02
2928 6516 6.761714 TCTTGTGGTCTCACTAAAAACTCTTC 59.238 38.462 0.00 0.00 43.94 2.87
2997 6626 5.890424 TGATTTTCGGGTAAATCCTTGTC 57.110 39.130 12.68 0.00 41.62 3.18
3078 6709 5.175090 TCTGCATCGAGAGTACATTACAG 57.825 43.478 0.00 0.00 0.00 2.74
3098 6729 2.032030 AGAATGTTCACGTTCCTTTGCG 60.032 45.455 8.07 0.00 41.55 4.85
3532 7525 0.179004 ACGCCAATTCCAACTGTCCA 60.179 50.000 0.00 0.00 0.00 4.02
3676 7671 4.218312 AGCCATCCTTTTGTTCTTCAGTT 58.782 39.130 0.00 0.00 0.00 3.16
3711 7706 5.975344 TCCGTTCAGTATTATTGTAAGCTCG 59.025 40.000 0.00 0.00 0.00 5.03
3767 7850 6.294899 GGTTTTCTTAGGATAAACCACCAACC 60.295 42.308 18.28 0.00 46.35 3.77
3852 8048 9.613428 CTGTTGGATAATTGGTAGAAATGACTA 57.387 33.333 0.00 0.00 0.00 2.59
3923 8119 5.971763 ACACCTGATAAGATCAACTCTGAC 58.028 41.667 0.00 0.00 39.11 3.51
3984 8180 7.875041 AGTTGCATATAGATTGTATGACAGTCC 59.125 37.037 0.00 0.00 35.71 3.85
4011 8453 8.095937 AGTTCAAGTAACTGCCATTAACTTAC 57.904 34.615 0.00 0.00 46.90 2.34
4012 8454 7.174426 AGTTCAAGTAACTGCCATTAACTTACC 59.826 37.037 0.00 0.00 46.90 2.85
4013 8455 6.535540 TCAAGTAACTGCCATTAACTTACCA 58.464 36.000 0.00 0.00 0.00 3.25
4014 8456 7.172342 TCAAGTAACTGCCATTAACTTACCAT 58.828 34.615 0.00 0.00 0.00 3.55
4015 8457 7.668052 TCAAGTAACTGCCATTAACTTACCATT 59.332 33.333 0.00 0.00 0.00 3.16
4016 8458 8.952278 CAAGTAACTGCCATTAACTTACCATTA 58.048 33.333 0.00 0.00 0.00 1.90
4017 8459 9.695155 AAGTAACTGCCATTAACTTACCATTAT 57.305 29.630 0.00 0.00 0.00 1.28
4018 8460 9.120538 AGTAACTGCCATTAACTTACCATTATG 57.879 33.333 0.00 0.00 0.00 1.90
4019 8461 6.391227 ACTGCCATTAACTTACCATTATGC 57.609 37.500 0.00 0.00 0.00 3.14
4020 8462 5.890985 ACTGCCATTAACTTACCATTATGCA 59.109 36.000 0.00 0.00 0.00 3.96
4021 8463 6.039717 ACTGCCATTAACTTACCATTATGCAG 59.960 38.462 0.00 0.00 44.96 4.41
4022 8464 6.125719 TGCCATTAACTTACCATTATGCAGA 58.874 36.000 0.00 0.00 0.00 4.26
4023 8465 6.262944 TGCCATTAACTTACCATTATGCAGAG 59.737 38.462 0.00 0.00 0.00 3.35
4024 8466 6.672147 CCATTAACTTACCATTATGCAGAGC 58.328 40.000 0.00 0.00 0.00 4.09
4025 8467 5.984233 TTAACTTACCATTATGCAGAGCG 57.016 39.130 0.00 0.00 0.00 5.03
4026 8468 2.213499 ACTTACCATTATGCAGAGCGC 58.787 47.619 0.00 0.00 42.89 5.92
4027 8469 2.158900 ACTTACCATTATGCAGAGCGCT 60.159 45.455 11.27 11.27 43.06 5.92
4028 8470 1.869774 TACCATTATGCAGAGCGCTG 58.130 50.000 18.48 13.73 45.13 5.18
4152 8602 1.280133 AGCATCATGTACAGGCTGTGT 59.720 47.619 29.65 12.82 43.86 3.72
4164 8614 4.777463 ACAGGCTGTGTTACTTGTTACTT 58.223 39.130 21.37 0.00 34.94 2.24
4312 9150 6.479884 AGATAAAACACCTTGATCTCTGCTT 58.520 36.000 0.00 0.00 0.00 3.91
4345 9183 3.777106 TTCCTATTGCCTGCCATCTAG 57.223 47.619 0.00 0.00 0.00 2.43
4605 9578 1.739562 CTCTGTGCTTCCGACCAGC 60.740 63.158 0.00 0.00 37.82 4.85
4682 9764 2.706339 AAGAGCTTGCCACCTAGATG 57.294 50.000 0.00 0.00 0.00 2.90
4697 9779 6.127758 CCACCTAGATGCTAAGCTATGTAGAG 60.128 46.154 0.00 0.00 0.00 2.43
4853 9944 3.206150 AGACAACGTTTGCTCAAGTCAT 58.794 40.909 13.17 0.00 0.00 3.06
5109 10433 5.023533 TGACAATGAATAGTAGGACTGGC 57.976 43.478 0.00 0.00 0.00 4.85
5134 10458 7.847078 GCACACGACGTATTGCTTATTAATTTA 59.153 33.333 20.84 0.00 32.00 1.40
5154 10478 8.909708 AATTTACCATGTATGATTTCACGTTG 57.090 30.769 0.00 0.00 0.00 4.10
5326 10666 7.459795 AATTCCATGAGAAGTTCTTTTCCTC 57.540 36.000 6.88 0.00 38.07 3.71
5337 10677 3.543680 TCTTTTCCTCCTCGGCTAATG 57.456 47.619 0.00 0.00 0.00 1.90
5428 10768 5.755409 ACTGTACCCAAACTGATCATACA 57.245 39.130 0.00 0.00 0.00 2.29
5437 10777 6.706270 CCCAAACTGATCATACATAGGTACAC 59.294 42.308 0.00 0.00 30.94 2.90
5474 10814 9.770097 CAAGCCAATCAATCTAGTTAGAGAATA 57.230 33.333 0.00 0.00 35.50 1.75
5623 11217 2.554344 GGGTGATGGTGAAGGTGCTTTA 60.554 50.000 0.00 0.00 0.00 1.85
5752 11349 5.360999 TGTCCACTGATGACTTACTCCATAG 59.639 44.000 0.00 0.00 33.83 2.23
5877 11496 4.362932 GTGAACTACGGTAACCTACTCC 57.637 50.000 0.00 0.00 0.00 3.85
5914 11538 0.401356 TGAGTGCCTCCAAATGCTGA 59.599 50.000 0.50 0.00 0.00 4.26
5986 11866 6.736853 GCATACTTGACTATTTCACGTCAAAC 59.263 38.462 6.35 0.00 46.05 2.93
6013 11905 3.737559 AATGCACACCCCTGAAGAATA 57.262 42.857 0.00 0.00 0.00 1.75
6051 11992 2.735134 CGCCACTTGTGTCTAAGTAACC 59.265 50.000 0.00 0.00 38.78 2.85
6328 12331 1.083015 CACGCGGAAAAACTCGTGG 60.083 57.895 12.47 0.00 45.76 4.94
6348 12351 1.603802 GCTGCAGACTGCTAAAACACA 59.396 47.619 26.94 4.40 45.31 3.72
6432 12437 1.394618 TTGGGTGCGTACTTTTTGCT 58.605 45.000 3.01 0.00 0.00 3.91
6464 12469 6.919662 ACTATTGAGCAAATGGATTAAATGCG 59.080 34.615 3.08 0.00 41.72 4.73
6497 12502 1.726892 GCTAGTTTAAAACGGCGCACC 60.727 52.381 10.83 0.00 36.23 5.01
6503 12508 1.843734 TAAAACGGCGCACCCTTTCG 61.844 55.000 10.83 3.69 0.00 3.46
6504 12509 4.922026 AACGGCGCACCCTTTCGT 62.922 61.111 10.83 4.47 35.48 3.85
6509 12514 0.952010 GGCGCACCCTTTCGTTTAGA 60.952 55.000 10.83 0.00 0.00 2.10
6511 12516 1.264826 GCGCACCCTTTCGTTTAGAAA 59.735 47.619 0.30 0.00 45.76 2.52
6512 12517 2.287129 GCGCACCCTTTCGTTTAGAAAA 60.287 45.455 0.30 0.00 46.98 2.29
6536 12541 7.781763 AAAATTATATTAATTCGCGCTCTGC 57.218 32.000 5.56 0.00 41.47 4.26
6546 12551 1.449246 GCGCTCTGCTCTCCATGTT 60.449 57.895 0.00 0.00 41.73 2.71
6551 12556 0.251354 TCTGCTCTCCATGTTGCTCC 59.749 55.000 0.00 0.00 0.00 4.70
6553 12558 1.300963 GCTCTCCATGTTGCTCCCA 59.699 57.895 0.00 0.00 0.00 4.37
6554 12559 0.322816 GCTCTCCATGTTGCTCCCAA 60.323 55.000 0.00 0.00 0.00 4.12
6555 12560 1.684248 GCTCTCCATGTTGCTCCCAAT 60.684 52.381 0.00 0.00 32.75 3.16
6557 12562 1.019673 CTCCATGTTGCTCCCAATCG 58.980 55.000 0.00 0.00 32.75 3.34
6558 12563 1.031571 TCCATGTTGCTCCCAATCGC 61.032 55.000 0.00 0.00 32.75 4.58
6559 12564 1.434696 CATGTTGCTCCCAATCGCC 59.565 57.895 0.00 0.00 32.75 5.54
6560 12565 1.033746 CATGTTGCTCCCAATCGCCT 61.034 55.000 0.00 0.00 32.75 5.52
6561 12566 0.323725 ATGTTGCTCCCAATCGCCTT 60.324 50.000 0.00 0.00 32.75 4.35
6562 12567 0.539438 TGTTGCTCCCAATCGCCTTT 60.539 50.000 0.00 0.00 32.75 3.11
6564 12569 1.876497 TTGCTCCCAATCGCCTTTGC 61.876 55.000 0.00 0.00 0.00 3.68
6565 12570 2.048603 GCTCCCAATCGCCTTTGCT 61.049 57.895 0.00 0.00 34.43 3.91
6569 12574 1.153901 CCAATCGCCTTTGCTGCTG 60.154 57.895 0.00 0.00 34.43 4.41
6570 12575 1.153901 CAATCGCCTTTGCTGCTGG 60.154 57.895 0.00 1.86 34.43 4.85
6571 12576 1.303561 AATCGCCTTTGCTGCTGGA 60.304 52.632 0.00 0.00 34.43 3.86
6572 12577 0.682209 AATCGCCTTTGCTGCTGGAT 60.682 50.000 0.00 0.00 34.43 3.41
6573 12578 1.381928 ATCGCCTTTGCTGCTGGATG 61.382 55.000 0.00 0.00 34.43 3.51
6574 12579 2.183555 GCCTTTGCTGCTGGATGC 59.816 61.111 0.00 0.00 43.25 3.91
6575 12580 2.488355 CCTTTGCTGCTGGATGCG 59.512 61.111 0.00 0.00 46.63 4.73
6581 12586 3.506096 CTGCTGGATGCGGCTGTG 61.506 66.667 19.53 5.80 46.63 3.66
6584 12589 4.790962 CTGGATGCGGCTGTGGCT 62.791 66.667 0.00 0.00 38.73 4.75
6585 12590 3.390183 CTGGATGCGGCTGTGGCTA 62.390 63.158 0.00 0.00 38.73 3.93
6586 12591 2.590007 GGATGCGGCTGTGGCTAG 60.590 66.667 0.00 0.00 38.73 3.42
6587 12592 2.590007 GATGCGGCTGTGGCTAGG 60.590 66.667 0.00 0.00 38.73 3.02
6588 12593 4.864334 ATGCGGCTGTGGCTAGGC 62.864 66.667 9.85 9.85 39.65 3.93
6606 12611 4.711949 CTGCGGCTCAAGGTGGCT 62.712 66.667 0.00 0.00 0.00 4.75
6608 12613 4.704833 GCGGCTCAAGGTGGCTGA 62.705 66.667 0.00 0.00 37.02 4.26
6609 12614 2.032528 CGGCTCAAGGTGGCTGAA 59.967 61.111 0.00 0.00 37.02 3.02
6610 12615 1.600636 CGGCTCAAGGTGGCTGAAA 60.601 57.895 0.00 0.00 37.02 2.69
6611 12616 1.580845 CGGCTCAAGGTGGCTGAAAG 61.581 60.000 0.00 0.00 37.02 2.62
6612 12617 1.246737 GGCTCAAGGTGGCTGAAAGG 61.247 60.000 0.00 0.00 0.00 3.11
6613 12618 0.250901 GCTCAAGGTGGCTGAAAGGA 60.251 55.000 0.00 0.00 0.00 3.36
6614 12619 1.818642 CTCAAGGTGGCTGAAAGGAG 58.181 55.000 0.00 0.00 0.00 3.69
6615 12620 0.401738 TCAAGGTGGCTGAAAGGAGG 59.598 55.000 0.00 0.00 0.00 4.30
6616 12621 1.075659 AAGGTGGCTGAAAGGAGGC 59.924 57.895 0.00 0.00 38.99 4.70
6617 12622 1.719063 AAGGTGGCTGAAAGGAGGCA 61.719 55.000 0.00 0.00 45.64 4.75
6620 12625 2.965805 TGGCTGAAAGGAGGCATTG 58.034 52.632 0.00 0.00 43.18 2.82
6621 12626 0.612732 TGGCTGAAAGGAGGCATTGG 60.613 55.000 0.00 0.00 43.18 3.16
6622 12627 0.613012 GGCTGAAAGGAGGCATTGGT 60.613 55.000 0.00 0.00 38.40 3.67
6623 12628 0.529378 GCTGAAAGGAGGCATTGGTG 59.471 55.000 0.00 0.00 0.00 4.17
6624 12629 1.887956 GCTGAAAGGAGGCATTGGTGA 60.888 52.381 0.00 0.00 0.00 4.02
6625 12630 2.731572 CTGAAAGGAGGCATTGGTGAT 58.268 47.619 0.00 0.00 0.00 3.06
6626 12631 3.889815 CTGAAAGGAGGCATTGGTGATA 58.110 45.455 0.00 0.00 0.00 2.15
6627 12632 3.620488 TGAAAGGAGGCATTGGTGATAC 58.380 45.455 0.00 0.00 0.00 2.24
6628 12633 3.266772 TGAAAGGAGGCATTGGTGATACT 59.733 43.478 0.00 0.00 0.00 2.12
6629 12634 3.287867 AAGGAGGCATTGGTGATACTG 57.712 47.619 0.00 0.00 0.00 2.74
6630 12635 2.481441 AGGAGGCATTGGTGATACTGA 58.519 47.619 0.00 0.00 0.00 3.41
6631 12636 2.171448 AGGAGGCATTGGTGATACTGAC 59.829 50.000 0.00 0.00 0.00 3.51
6632 12637 2.171448 GGAGGCATTGGTGATACTGACT 59.829 50.000 0.00 0.00 0.00 3.41
6638 12643 0.817654 TGGTGATACTGACTGGAGCG 59.182 55.000 0.00 0.00 0.00 5.03
6670 12675 2.734079 CGCCTTTTGTTGTTGTTGTTGT 59.266 40.909 0.00 0.00 0.00 3.32
6671 12676 3.185391 CGCCTTTTGTTGTTGTTGTTGTT 59.815 39.130 0.00 0.00 0.00 2.83
6672 12677 4.462307 GCCTTTTGTTGTTGTTGTTGTTG 58.538 39.130 0.00 0.00 0.00 3.33
6673 12678 4.612486 GCCTTTTGTTGTTGTTGTTGTTGG 60.612 41.667 0.00 0.00 0.00 3.77
6674 12679 4.083590 CCTTTTGTTGTTGTTGTTGTTGGG 60.084 41.667 0.00 0.00 0.00 4.12
6675 12680 4.336889 TTTGTTGTTGTTGTTGTTGGGA 57.663 36.364 0.00 0.00 0.00 4.37
6676 12681 4.543590 TTGTTGTTGTTGTTGTTGGGAT 57.456 36.364 0.00 0.00 0.00 3.85
6746 13830 2.325082 CGCTGGGTACAGGTTGCAC 61.325 63.158 0.00 0.00 45.04 4.57
6750 13834 0.978151 TGGGTACAGGTTGCACGTAT 59.022 50.000 0.00 0.00 0.00 3.06
6780 13864 3.425659 GGATTTCAGAGAACCTTTGCCT 58.574 45.455 0.00 0.00 0.00 4.75
6781 13865 3.192212 GGATTTCAGAGAACCTTTGCCTG 59.808 47.826 0.00 0.00 0.00 4.85
6782 13866 2.276732 TTCAGAGAACCTTTGCCTGG 57.723 50.000 0.00 0.00 0.00 4.45
6783 13867 1.434188 TCAGAGAACCTTTGCCTGGA 58.566 50.000 0.00 0.00 0.00 3.86
6784 13868 1.988107 TCAGAGAACCTTTGCCTGGAT 59.012 47.619 0.00 0.00 0.00 3.41
6785 13869 2.376518 TCAGAGAACCTTTGCCTGGATT 59.623 45.455 0.00 0.00 0.00 3.01
6786 13870 2.751806 CAGAGAACCTTTGCCTGGATTC 59.248 50.000 0.00 0.00 0.00 2.52
6787 13871 2.095461 GAGAACCTTTGCCTGGATTCC 58.905 52.381 0.00 0.00 0.00 3.01
6788 13872 1.713078 AGAACCTTTGCCTGGATTCCT 59.287 47.619 3.95 0.00 0.00 3.36
6789 13873 2.095461 GAACCTTTGCCTGGATTCCTC 58.905 52.381 3.95 0.00 0.00 3.71
6790 13874 0.332972 ACCTTTGCCTGGATTCCTCC 59.667 55.000 3.95 0.00 42.45 4.30
6791 13875 0.627986 CCTTTGCCTGGATTCCTCCT 59.372 55.000 3.95 0.00 42.59 3.69
6792 13876 1.409381 CCTTTGCCTGGATTCCTCCTC 60.409 57.143 3.95 0.00 42.59 3.71
6793 13877 1.283029 CTTTGCCTGGATTCCTCCTCA 59.717 52.381 3.95 0.00 42.59 3.86
6794 13878 0.620556 TTGCCTGGATTCCTCCTCAC 59.379 55.000 3.95 0.00 42.59 3.51
6795 13879 1.274703 TGCCTGGATTCCTCCTCACC 61.275 60.000 3.95 0.00 42.59 4.02
6796 13880 1.988982 GCCTGGATTCCTCCTCACCC 61.989 65.000 3.95 0.00 42.59 4.61
6797 13881 0.621571 CCTGGATTCCTCCTCACCCA 60.622 60.000 3.95 0.00 42.59 4.51
6798 13882 1.516110 CTGGATTCCTCCTCACCCAT 58.484 55.000 3.95 0.00 42.59 4.00
6799 13883 2.694397 CTGGATTCCTCCTCACCCATA 58.306 52.381 3.95 0.00 42.59 2.74
6800 13884 2.636893 CTGGATTCCTCCTCACCCATAG 59.363 54.545 3.95 0.00 42.59 2.23
6801 13885 2.250008 TGGATTCCTCCTCACCCATAGA 59.750 50.000 3.95 0.00 42.59 1.98
6802 13886 3.116199 TGGATTCCTCCTCACCCATAGAT 60.116 47.826 3.95 0.00 42.59 1.98
6803 13887 3.913163 GGATTCCTCCTCACCCATAGATT 59.087 47.826 0.00 0.00 38.65 2.40
6804 13888 4.352298 GGATTCCTCCTCACCCATAGATTT 59.648 45.833 0.00 0.00 38.65 2.17
6805 13889 5.163045 GGATTCCTCCTCACCCATAGATTTT 60.163 44.000 0.00 0.00 38.65 1.82
6806 13890 5.796502 TTCCTCCTCACCCATAGATTTTT 57.203 39.130 0.00 0.00 0.00 1.94
6807 13891 5.116084 TCCTCCTCACCCATAGATTTTTG 57.884 43.478 0.00 0.00 0.00 2.44
6808 13892 3.633986 CCTCCTCACCCATAGATTTTTGC 59.366 47.826 0.00 0.00 0.00 3.68
6809 13893 3.278574 TCCTCACCCATAGATTTTTGCG 58.721 45.455 0.00 0.00 0.00 4.85
6810 13894 3.016736 CCTCACCCATAGATTTTTGCGT 58.983 45.455 0.00 0.00 0.00 5.24
6811 13895 3.181497 CCTCACCCATAGATTTTTGCGTG 60.181 47.826 0.00 0.00 0.00 5.34
6812 13896 2.752354 TCACCCATAGATTTTTGCGTGG 59.248 45.455 0.00 0.00 0.00 4.94
6813 13897 2.752354 CACCCATAGATTTTTGCGTGGA 59.248 45.455 0.00 0.00 0.00 4.02
6814 13898 3.381272 CACCCATAGATTTTTGCGTGGAT 59.619 43.478 0.00 0.00 0.00 3.41
6815 13899 4.578516 CACCCATAGATTTTTGCGTGGATA 59.421 41.667 0.00 0.00 0.00 2.59
6816 13900 4.578928 ACCCATAGATTTTTGCGTGGATAC 59.421 41.667 0.00 0.00 0.00 2.24
6817 13901 4.821805 CCCATAGATTTTTGCGTGGATACT 59.178 41.667 0.00 0.00 37.61 2.12
6818 13902 5.049405 CCCATAGATTTTTGCGTGGATACTC 60.049 44.000 0.00 0.00 37.61 2.59
6819 13903 5.049405 CCATAGATTTTTGCGTGGATACTCC 60.049 44.000 0.00 0.00 36.96 3.85
6820 13904 3.279434 AGATTTTTGCGTGGATACTCCC 58.721 45.455 0.00 0.00 35.03 4.30
6821 13905 2.871096 TTTTTGCGTGGATACTCCCT 57.129 45.000 0.00 0.00 35.03 4.20
6822 13906 2.396590 TTTTGCGTGGATACTCCCTC 57.603 50.000 0.00 0.00 35.03 4.30
6823 13907 1.271856 TTTGCGTGGATACTCCCTCA 58.728 50.000 0.00 0.00 35.03 3.86
6824 13908 0.535335 TTGCGTGGATACTCCCTCAC 59.465 55.000 0.00 0.00 35.03 3.51
6825 13909 1.327690 TGCGTGGATACTCCCTCACC 61.328 60.000 0.00 0.00 35.03 4.02
6826 13910 2.029307 GCGTGGATACTCCCTCACCC 62.029 65.000 0.00 0.00 35.03 4.61
6827 13911 0.686441 CGTGGATACTCCCTCACCCA 60.686 60.000 0.00 0.00 35.03 4.51
6828 13912 1.807814 GTGGATACTCCCTCACCCAT 58.192 55.000 0.00 0.00 35.03 4.00
6829 13913 2.755208 CGTGGATACTCCCTCACCCATA 60.755 54.545 0.00 0.00 35.03 2.74
6830 13914 3.314693 GTGGATACTCCCTCACCCATAA 58.685 50.000 0.00 0.00 35.03 1.90
6831 13915 3.714798 GTGGATACTCCCTCACCCATAAA 59.285 47.826 0.00 0.00 35.03 1.40
6832 13916 4.351111 GTGGATACTCCCTCACCCATAAAT 59.649 45.833 0.00 0.00 35.03 1.40
6833 13917 4.981647 TGGATACTCCCTCACCCATAAATT 59.018 41.667 0.00 0.00 35.03 1.82
6834 13918 5.435041 TGGATACTCCCTCACCCATAAATTT 59.565 40.000 0.00 0.00 35.03 1.82
6835 13919 6.004574 GGATACTCCCTCACCCATAAATTTC 58.995 44.000 0.00 0.00 0.00 2.17
6836 13920 4.946160 ACTCCCTCACCCATAAATTTCA 57.054 40.909 0.00 0.00 0.00 2.69
6837 13921 4.860022 ACTCCCTCACCCATAAATTTCAG 58.140 43.478 0.00 0.00 0.00 3.02
6838 13922 4.540099 ACTCCCTCACCCATAAATTTCAGA 59.460 41.667 0.00 0.00 0.00 3.27
6839 13923 5.116084 TCCCTCACCCATAAATTTCAGAG 57.884 43.478 0.00 0.00 0.00 3.35
6840 13924 4.788075 TCCCTCACCCATAAATTTCAGAGA 59.212 41.667 0.00 0.00 0.00 3.10
6841 13925 5.252863 TCCCTCACCCATAAATTTCAGAGAA 59.747 40.000 0.00 0.00 0.00 2.87
6842 13926 5.358160 CCCTCACCCATAAATTTCAGAGAAC 59.642 44.000 0.00 0.00 0.00 3.01
6843 13927 5.358160 CCTCACCCATAAATTTCAGAGAACC 59.642 44.000 0.00 0.00 0.00 3.62
6844 13928 6.139679 TCACCCATAAATTTCAGAGAACCT 57.860 37.500 0.00 0.00 0.00 3.50
6845 13929 6.552008 TCACCCATAAATTTCAGAGAACCTT 58.448 36.000 0.00 0.00 0.00 3.50
6846 13930 7.695055 TCACCCATAAATTTCAGAGAACCTTA 58.305 34.615 0.00 0.00 0.00 2.69
6847 13931 7.829211 TCACCCATAAATTTCAGAGAACCTTAG 59.171 37.037 0.00 0.00 0.00 2.18
6848 13932 6.603599 ACCCATAAATTTCAGAGAACCTTAGC 59.396 38.462 0.00 0.00 0.00 3.09
6849 13933 6.039829 CCCATAAATTTCAGAGAACCTTAGCC 59.960 42.308 0.00 0.00 0.00 3.93
6850 13934 6.830838 CCATAAATTTCAGAGAACCTTAGCCT 59.169 38.462 0.00 0.00 0.00 4.58
6876 13960 1.212688 CTCCCTCACCCATACATGCAA 59.787 52.381 0.00 0.00 0.00 4.08
6882 13966 3.887110 CTCACCCATACATGCAACATGAT 59.113 43.478 14.17 1.52 0.00 2.45
7076 14185 0.987294 ATGTGCCACAAGCCTAGTCT 59.013 50.000 0.00 0.00 42.71 3.24
7082 14191 2.432510 GCCACAAGCCTAGTCTCATAGT 59.567 50.000 0.00 0.00 34.35 2.12
7111 14222 1.244019 GCCTTCATGAACGCCAAGGT 61.244 55.000 15.99 0.00 38.17 3.50
7159 14270 6.128172 CGCTTCTACACCTTCATCTTCATTTT 60.128 38.462 0.00 0.00 0.00 1.82
7161 14272 7.094634 GCTTCTACACCTTCATCTTCATTTTCA 60.095 37.037 0.00 0.00 0.00 2.69
7166 14277 8.130671 ACACCTTCATCTTCATTTTCAATCAT 57.869 30.769 0.00 0.00 0.00 2.45
7186 14297 0.917333 AAACCCCGAGCCTCCCATTA 60.917 55.000 0.00 0.00 0.00 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 0.888619 TGGAGATCAGGACGTGTCAC 59.111 55.000 0.00 0.00 0.00 3.67
33 34 0.888619 GTGGAGATCAGGACGTGTCA 59.111 55.000 0.00 0.00 0.00 3.58
34 35 0.173708 GGTGGAGATCAGGACGTGTC 59.826 60.000 0.00 0.00 0.00 3.67
35 36 1.258445 GGGTGGAGATCAGGACGTGT 61.258 60.000 0.00 0.00 0.00 4.49
36 37 1.517832 GGGTGGAGATCAGGACGTG 59.482 63.158 0.00 0.00 0.00 4.49
37 38 2.052690 CGGGTGGAGATCAGGACGT 61.053 63.158 0.00 0.00 0.00 4.34
38 39 2.808315 CGGGTGGAGATCAGGACG 59.192 66.667 0.00 0.00 0.00 4.79
39 40 2.501610 GCGGGTGGAGATCAGGAC 59.498 66.667 0.00 0.00 0.00 3.85
40 41 2.764128 GGCGGGTGGAGATCAGGA 60.764 66.667 0.00 0.00 0.00 3.86
41 42 4.227134 CGGCGGGTGGAGATCAGG 62.227 72.222 0.00 0.00 0.00 3.86
42 43 3.461773 ACGGCGGGTGGAGATCAG 61.462 66.667 13.24 0.00 0.00 2.90
43 44 3.770040 CACGGCGGGTGGAGATCA 61.770 66.667 13.24 0.00 43.16 2.92
44 45 3.014085 TTCACGGCGGGTGGAGATC 62.014 63.158 9.84 0.00 46.96 2.75
45 46 3.000819 TTCACGGCGGGTGGAGAT 61.001 61.111 9.84 0.00 46.96 2.75
46 47 3.998672 GTTCACGGCGGGTGGAGA 61.999 66.667 9.84 0.00 46.96 3.71
58 59 2.146342 CATGTCAGTGAGTGGGTTCAC 58.854 52.381 0.00 0.00 46.14 3.18
59 60 2.046292 TCATGTCAGTGAGTGGGTTCA 58.954 47.619 0.00 0.00 0.00 3.18
60 61 2.839486 TCATGTCAGTGAGTGGGTTC 57.161 50.000 0.00 0.00 0.00 3.62
61 62 3.328931 AGAATCATGTCAGTGAGTGGGTT 59.671 43.478 0.00 0.00 0.00 4.11
62 63 2.909006 AGAATCATGTCAGTGAGTGGGT 59.091 45.455 0.00 0.00 0.00 4.51
63 64 3.197333 AGAGAATCATGTCAGTGAGTGGG 59.803 47.826 0.00 0.00 37.82 4.61
64 65 4.431809 GAGAGAATCATGTCAGTGAGTGG 58.568 47.826 0.00 0.00 37.82 4.00
65 66 4.104066 CGAGAGAATCATGTCAGTGAGTG 58.896 47.826 0.00 0.00 37.82 3.51
66 67 3.428725 GCGAGAGAATCATGTCAGTGAGT 60.429 47.826 0.00 0.00 37.82 3.41
67 68 3.114809 GCGAGAGAATCATGTCAGTGAG 58.885 50.000 0.00 0.00 37.82 3.51
68 69 2.478539 CGCGAGAGAATCATGTCAGTGA 60.479 50.000 0.00 0.00 37.82 3.41
69 70 1.851053 CGCGAGAGAATCATGTCAGTG 59.149 52.381 0.00 0.00 37.82 3.66
70 71 1.800655 GCGCGAGAGAATCATGTCAGT 60.801 52.381 12.10 0.00 37.82 3.41
71 72 0.851495 GCGCGAGAGAATCATGTCAG 59.149 55.000 12.10 0.00 37.82 3.51
72 73 0.457443 AGCGCGAGAGAATCATGTCA 59.543 50.000 12.10 0.00 37.82 3.58
73 74 1.257415 CAAGCGCGAGAGAATCATGTC 59.743 52.381 12.10 0.00 37.82 3.06
74 75 1.284657 CAAGCGCGAGAGAATCATGT 58.715 50.000 12.10 0.00 37.82 3.21
75 76 1.005242 CACAAGCGCGAGAGAATCATG 60.005 52.381 12.10 0.00 37.82 3.07
76 77 1.284657 CACAAGCGCGAGAGAATCAT 58.715 50.000 12.10 0.00 37.82 2.45
77 78 0.038251 ACACAAGCGCGAGAGAATCA 60.038 50.000 12.10 0.00 37.82 2.57
78 79 0.368227 CACACAAGCGCGAGAGAATC 59.632 55.000 12.10 0.00 0.00 2.52
79 80 0.319900 ACACACAAGCGCGAGAGAAT 60.320 50.000 12.10 0.00 0.00 2.40
80 81 0.939577 GACACACAAGCGCGAGAGAA 60.940 55.000 12.10 0.00 0.00 2.87
81 82 1.371758 GACACACAAGCGCGAGAGA 60.372 57.895 12.10 0.00 0.00 3.10
82 83 2.375766 GGACACACAAGCGCGAGAG 61.376 63.158 12.10 0.00 0.00 3.20
83 84 2.355837 GGACACACAAGCGCGAGA 60.356 61.111 12.10 0.00 0.00 4.04
84 85 3.414700 GGGACACACAAGCGCGAG 61.415 66.667 12.10 0.01 0.00 5.03
90 91 3.041940 GACCGCGGGACACACAAG 61.042 66.667 31.76 0.00 0.00 3.16
91 92 2.668185 AATGACCGCGGGACACACAA 62.668 55.000 31.76 7.05 29.43 3.33
92 93 3.171828 AATGACCGCGGGACACACA 62.172 57.895 31.76 18.28 29.43 3.72
93 94 2.358247 AATGACCGCGGGACACAC 60.358 61.111 31.76 13.25 29.43 3.82
94 95 2.358125 CAATGACCGCGGGACACA 60.358 61.111 31.76 22.52 29.43 3.72
95 96 3.799755 GCAATGACCGCGGGACAC 61.800 66.667 31.76 17.58 29.43 3.67
103 104 4.715523 ACCCACCCGCAATGACCG 62.716 66.667 0.00 0.00 0.00 4.79
104 105 2.750237 GACCCACCCGCAATGACC 60.750 66.667 0.00 0.00 0.00 4.02
105 106 2.750237 GGACCCACCCGCAATGAC 60.750 66.667 0.00 0.00 0.00 3.06
106 107 4.402528 CGGACCCACCCGCAATGA 62.403 66.667 0.00 0.00 43.25 2.57
113 114 1.303074 GGAGTTTTCGGACCCACCC 60.303 63.158 0.00 0.00 34.64 4.61
114 115 1.670083 CGGAGTTTTCGGACCCACC 60.670 63.158 0.00 0.00 0.00 4.61
115 116 0.669625 CTCGGAGTTTTCGGACCCAC 60.670 60.000 0.00 0.00 0.00 4.61
116 117 1.117142 ACTCGGAGTTTTCGGACCCA 61.117 55.000 4.45 0.00 0.00 4.51
117 118 0.389556 GACTCGGAGTTTTCGGACCC 60.390 60.000 12.67 0.00 0.00 4.46
118 119 0.316204 TGACTCGGAGTTTTCGGACC 59.684 55.000 12.67 0.00 0.00 4.46
119 120 1.268899 TCTGACTCGGAGTTTTCGGAC 59.731 52.381 12.67 0.00 0.00 4.79
120 121 1.612676 TCTGACTCGGAGTTTTCGGA 58.387 50.000 12.67 7.38 0.00 4.55
121 122 2.263077 CATCTGACTCGGAGTTTTCGG 58.737 52.381 12.67 5.03 0.00 4.30
122 123 2.263077 CCATCTGACTCGGAGTTTTCG 58.737 52.381 12.67 1.82 0.00 3.46
123 124 2.028020 ACCCATCTGACTCGGAGTTTTC 60.028 50.000 12.67 0.04 0.00 2.29
124 125 1.978580 ACCCATCTGACTCGGAGTTTT 59.021 47.619 12.67 0.00 0.00 2.43
125 126 1.645710 ACCCATCTGACTCGGAGTTT 58.354 50.000 12.67 0.00 0.00 2.66
126 127 1.645710 AACCCATCTGACTCGGAGTT 58.354 50.000 12.67 0.00 0.00 3.01
127 128 1.645710 AAACCCATCTGACTCGGAGT 58.354 50.000 11.09 11.09 0.00 3.85
128 129 2.761208 AGTAAACCCATCTGACTCGGAG 59.239 50.000 2.83 2.83 0.00 4.63
129 130 2.758979 GAGTAAACCCATCTGACTCGGA 59.241 50.000 0.00 0.00 0.00 4.55
130 131 2.159085 GGAGTAAACCCATCTGACTCGG 60.159 54.545 0.00 0.00 37.91 4.63
131 132 3.166489 GGAGTAAACCCATCTGACTCG 57.834 52.381 0.00 0.00 37.91 4.18
141 142 1.153686 GTCGCTCGGGAGTAAACCC 60.154 63.158 0.00 0.00 45.92 4.11
142 143 1.153686 GGTCGCTCGGGAGTAAACC 60.154 63.158 0.00 0.00 0.00 3.27
143 144 0.458025 CTGGTCGCTCGGGAGTAAAC 60.458 60.000 0.00 0.00 0.00 2.01
144 145 0.896940 ACTGGTCGCTCGGGAGTAAA 60.897 55.000 0.00 0.00 0.00 2.01
145 146 0.896940 AACTGGTCGCTCGGGAGTAA 60.897 55.000 0.00 0.00 0.00 2.24
146 147 1.303888 AACTGGTCGCTCGGGAGTA 60.304 57.895 0.00 0.00 0.00 2.59
147 148 2.600769 AACTGGTCGCTCGGGAGT 60.601 61.111 0.00 0.00 0.00 3.85
148 149 2.182030 GAACTGGTCGCTCGGGAG 59.818 66.667 0.00 0.00 0.00 4.30
149 150 3.379445 GGAACTGGTCGCTCGGGA 61.379 66.667 0.00 0.00 0.00 5.14
150 151 4.796231 CGGAACTGGTCGCTCGGG 62.796 72.222 0.00 0.00 0.00 5.14
151 152 4.796231 CCGGAACTGGTCGCTCGG 62.796 72.222 0.00 0.00 0.00 4.63
152 153 4.796231 CCCGGAACTGGTCGCTCG 62.796 72.222 0.73 0.00 0.00 5.03
153 154 3.692406 ACCCGGAACTGGTCGCTC 61.692 66.667 0.73 0.00 44.58 5.03
154 155 4.003788 CACCCGGAACTGGTCGCT 62.004 66.667 0.73 0.00 44.58 4.93
156 157 4.308458 TGCACCCGGAACTGGTCG 62.308 66.667 0.73 0.00 44.58 4.79
157 158 2.668550 GTGCACCCGGAACTGGTC 60.669 66.667 5.22 0.00 44.58 4.02
167 168 4.446413 CGTAGACCCGGTGCACCC 62.446 72.222 29.95 15.82 0.00 4.61
169 170 4.367023 TGCGTAGACCCGGTGCAC 62.367 66.667 8.80 8.80 0.00 4.57
170 171 4.367023 GTGCGTAGACCCGGTGCA 62.367 66.667 0.00 0.00 0.00 4.57
190 191 3.842925 TTCCGTGTCTTGCCCCTGC 62.843 63.158 0.00 0.00 38.26 4.85
191 192 1.228124 TTTCCGTGTCTTGCCCCTG 60.228 57.895 0.00 0.00 0.00 4.45
192 193 1.073199 CTTTCCGTGTCTTGCCCCT 59.927 57.895 0.00 0.00 0.00 4.79
193 194 0.955919 CTCTTTCCGTGTCTTGCCCC 60.956 60.000 0.00 0.00 0.00 5.80
194 195 1.578206 GCTCTTTCCGTGTCTTGCCC 61.578 60.000 0.00 0.00 0.00 5.36
195 196 0.884704 TGCTCTTTCCGTGTCTTGCC 60.885 55.000 0.00 0.00 0.00 4.52
196 197 0.235926 GTGCTCTTTCCGTGTCTTGC 59.764 55.000 0.00 0.00 0.00 4.01
197 198 0.508641 CGTGCTCTTTCCGTGTCTTG 59.491 55.000 0.00 0.00 0.00 3.02
198 199 1.222115 GCGTGCTCTTTCCGTGTCTT 61.222 55.000 0.00 0.00 0.00 3.01
199 200 1.664965 GCGTGCTCTTTCCGTGTCT 60.665 57.895 0.00 0.00 0.00 3.41
200 201 2.853914 GCGTGCTCTTTCCGTGTC 59.146 61.111 0.00 0.00 0.00 3.67
201 202 3.036084 CGCGTGCTCTTTCCGTGT 61.036 61.111 0.00 0.00 0.00 4.49
202 203 4.430423 GCGCGTGCTCTTTCCGTG 62.430 66.667 15.02 0.00 38.39 4.94
203 204 4.961511 TGCGCGTGCTCTTTCCGT 62.962 61.111 23.16 0.00 43.34 4.69
204 205 4.139420 CTGCGCGTGCTCTTTCCG 62.139 66.667 23.16 0.00 43.34 4.30
205 206 3.044305 ACTGCGCGTGCTCTTTCC 61.044 61.111 23.16 0.00 43.34 3.13
206 207 2.171940 CACTGCGCGTGCTCTTTC 59.828 61.111 23.16 0.00 43.34 2.62
217 218 3.046087 CTGAGGTGGTGCACTGCG 61.046 66.667 17.98 0.00 34.40 5.18
218 219 2.670934 CCTGAGGTGGTGCACTGC 60.671 66.667 17.98 9.63 34.40 4.40
219 220 2.670934 GCCTGAGGTGGTGCACTG 60.671 66.667 17.98 0.00 34.40 3.66
220 221 2.851102 AGCCTGAGGTGGTGCACT 60.851 61.111 17.98 0.00 34.40 4.40
221 222 2.670934 CAGCCTGAGGTGGTGCAC 60.671 66.667 8.80 8.80 37.86 4.57
222 223 1.993701 TTTCAGCCTGAGGTGGTGCA 61.994 55.000 0.00 0.00 41.96 4.57
223 224 0.823356 TTTTCAGCCTGAGGTGGTGC 60.823 55.000 0.00 0.00 41.96 5.01
224 225 0.954452 GTTTTCAGCCTGAGGTGGTG 59.046 55.000 0.00 0.00 41.96 4.17
225 226 0.178990 GGTTTTCAGCCTGAGGTGGT 60.179 55.000 0.00 0.00 41.96 4.16
229 230 0.610232 CTGGGGTTTTCAGCCTGAGG 60.610 60.000 0.00 0.00 40.83 3.86
518 536 4.003788 CCGAGGTTGCCGTGGAGT 62.004 66.667 0.00 0.00 0.00 3.85
566 584 4.918201 GCGAGGGATTGAGGCGGG 62.918 72.222 0.00 0.00 0.00 6.13
579 597 2.584418 CGGACAGGAGCATGCGAG 60.584 66.667 13.01 6.12 0.00 5.03
580 598 3.381983 ACGGACAGGAGCATGCGA 61.382 61.111 13.01 0.00 0.00 5.10
581 599 3.190849 CACGGACAGGAGCATGCG 61.191 66.667 13.01 0.00 0.00 4.73
582 600 3.503363 GCACGGACAGGAGCATGC 61.503 66.667 10.51 10.51 0.00 4.06
583 601 1.028330 AATGCACGGACAGGAGCATG 61.028 55.000 8.14 0.00 42.26 4.06
584 602 0.322816 AAATGCACGGACAGGAGCAT 60.323 50.000 0.00 0.00 44.01 3.79
585 603 0.537143 AAAATGCACGGACAGGAGCA 60.537 50.000 0.00 0.00 38.87 4.26
586 604 0.169009 GAAAATGCACGGACAGGAGC 59.831 55.000 0.00 0.00 0.00 4.70
587 605 0.804989 GGAAAATGCACGGACAGGAG 59.195 55.000 0.00 0.00 0.00 3.69
588 606 0.400213 AGGAAAATGCACGGACAGGA 59.600 50.000 0.00 0.00 0.00 3.86
589 607 0.804989 GAGGAAAATGCACGGACAGG 59.195 55.000 0.00 0.00 0.00 4.00
590 608 1.522668 TGAGGAAAATGCACGGACAG 58.477 50.000 0.00 0.00 0.00 3.51
591 609 2.198827 ATGAGGAAAATGCACGGACA 57.801 45.000 0.00 0.00 0.00 4.02
592 610 3.191371 AGAAATGAGGAAAATGCACGGAC 59.809 43.478 0.00 0.00 0.00 4.79
593 611 3.420893 AGAAATGAGGAAAATGCACGGA 58.579 40.909 0.00 0.00 0.00 4.69
594 612 3.855689 AGAAATGAGGAAAATGCACGG 57.144 42.857 0.00 0.00 0.00 4.94
595 613 4.168760 GGAAGAAATGAGGAAAATGCACG 58.831 43.478 0.00 0.00 0.00 5.34
615 633 2.094182 GGCATGAGTAGACTTGAACGGA 60.094 50.000 0.00 0.00 0.00 4.69
622 640 1.945387 CGCATGGCATGAGTAGACTT 58.055 50.000 30.69 0.00 0.00 3.01
629 647 4.899687 GCACGCGCATGGCATGAG 62.900 66.667 30.69 27.45 36.86 2.90
794 820 8.930760 GGTAAATGCAATAAAACAAGCAATACA 58.069 29.630 0.00 0.00 40.76 2.29
795 821 8.930760 TGGTAAATGCAATAAAACAAGCAATAC 58.069 29.630 0.00 0.00 40.76 1.89
827 853 2.277084 ACTAATCCAACGCCGATGTTC 58.723 47.619 0.00 0.00 0.00 3.18
920 1021 4.920640 TTTGTTTTAACCGGAATGCTCA 57.079 36.364 9.46 0.00 0.00 4.26
1596 2118 8.554490 ACAGAATTAAGAAATAGAGGAGGCTA 57.446 34.615 0.00 0.00 0.00 3.93
1597 2119 7.444703 ACAGAATTAAGAAATAGAGGAGGCT 57.555 36.000 0.00 0.00 0.00 4.58
1615 2137 9.300681 TCCAAATTAACTCTGAATCAACAGAAT 57.699 29.630 0.00 0.00 44.62 2.40
1673 2195 1.398692 AAACATGTTTGCCCACGTCT 58.601 45.000 22.71 0.00 0.00 4.18
1686 2208 2.031120 ACACACCCAGGACAAAACATG 58.969 47.619 0.00 0.00 0.00 3.21
1691 2213 2.808919 TCAAAACACACCCAGGACAAA 58.191 42.857 0.00 0.00 0.00 2.83
1711 2233 7.620880 TCTAAGTATGTGTTACTCCAAGCAAT 58.379 34.615 0.00 0.00 40.37 3.56
1805 2336 3.264706 TGGTTCGAGGATTGAAATGGGTA 59.735 43.478 0.00 0.00 40.90 3.69
1840 2371 4.478317 ACAATCCAATCCTAATCCTCACCA 59.522 41.667 0.00 0.00 0.00 4.17
1844 2375 6.360618 AGTGAACAATCCAATCCTAATCCTC 58.639 40.000 0.00 0.00 0.00 3.71
2023 2608 0.534412 CACTCAGCAGGGGAGTAGTG 59.466 60.000 0.00 0.00 43.47 2.74
2115 2701 6.653989 AGAGTAGGGAAAATCAACACATAGG 58.346 40.000 0.00 0.00 0.00 2.57
2193 2779 7.994911 AGAGGATTATGCAATAGAATGTTCACA 59.005 33.333 0.00 0.00 0.00 3.58
2194 2780 8.388484 AGAGGATTATGCAATAGAATGTTCAC 57.612 34.615 0.00 0.00 0.00 3.18
2367 2955 7.220683 CCGGAACAGCAAAATATACAGAAAATG 59.779 37.037 0.00 0.00 0.00 2.32
2389 2978 3.627395 AGTGAAATTCTGCATACCGGA 57.373 42.857 9.46 0.00 0.00 5.14
2391 2981 8.988064 AGTATATAGTGAAATTCTGCATACCG 57.012 34.615 0.00 0.00 0.00 4.02
2652 3280 1.906574 AGACCGTTGAGAATTGGGCTA 59.093 47.619 0.00 0.00 38.35 3.93
2784 3499 3.679980 CCATAATGCCGCTACATACTCAC 59.320 47.826 0.00 0.00 0.00 3.51
2785 3500 3.306710 CCCATAATGCCGCTACATACTCA 60.307 47.826 0.00 0.00 0.00 3.41
2894 6482 3.006323 GTGAGACCACAAGACTCAGACAT 59.994 47.826 0.00 0.00 42.72 3.06
2912 6500 6.201806 CAGACACCAGAAGAGTTTTTAGTGAG 59.798 42.308 0.00 0.00 0.00 3.51
2928 6516 1.337635 GCCTTGAGACTCAGACACCAG 60.338 57.143 5.10 0.00 0.00 4.00
2977 6604 4.581868 TCGACAAGGATTTACCCGAAAAT 58.418 39.130 0.00 0.00 40.05 1.82
3078 6709 2.032377 TCGCAAAGGAACGTGAACATTC 60.032 45.455 0.00 0.00 0.00 2.67
3153 6877 0.107703 TGGAGAAATGCTGCTACCCG 60.108 55.000 0.00 0.00 35.71 5.28
3286 7278 9.627123 TTATAATATTGTCAGAAAGAACCAGGG 57.373 33.333 0.00 0.00 0.00 4.45
3339 7332 8.988934 GCGATAATAACATAAGAACCTGATCAA 58.011 33.333 0.00 0.00 0.00 2.57
3532 7525 2.993863 ACCCCCTCAATACTCCAGTTTT 59.006 45.455 0.00 0.00 0.00 2.43
3676 7671 5.661056 ATACTGAACGGACAGATTTCAGA 57.339 39.130 15.59 2.53 46.16 3.27
3711 7706 5.173664 GTGGTGTTGTCTACATAGTAACCC 58.826 45.833 0.00 0.00 39.39 4.11
3767 7850 5.184287 ACAACCATTACCCTTCCAAATTACG 59.816 40.000 0.00 0.00 0.00 3.18
3852 8048 4.944317 GGAAGCAGCAGTACTATTTTCCTT 59.056 41.667 0.00 0.00 32.54 3.36
3923 8119 4.442706 AGAGTACACCAATTGCCTTATCG 58.557 43.478 0.00 0.00 0.00 2.92
4018 8460 0.522915 GATTTGCTTCAGCGCTCTGC 60.523 55.000 7.13 13.09 45.83 4.26
4019 8461 1.085091 AGATTTGCTTCAGCGCTCTG 58.915 50.000 7.13 0.00 45.83 3.35
4020 8462 1.467734 CAAGATTTGCTTCAGCGCTCT 59.532 47.619 7.13 0.00 45.83 4.09
4021 8463 1.466167 TCAAGATTTGCTTCAGCGCTC 59.534 47.619 7.13 0.00 45.83 5.03
4022 8464 1.527034 TCAAGATTTGCTTCAGCGCT 58.473 45.000 2.64 2.64 45.83 5.92
4023 8465 2.336554 TTCAAGATTTGCTTCAGCGC 57.663 45.000 0.00 0.00 45.83 5.92
4024 8466 5.510674 CAGTATTTCAAGATTTGCTTCAGCG 59.489 40.000 0.00 0.00 45.83 5.18
4025 8467 6.385033 ACAGTATTTCAAGATTTGCTTCAGC 58.615 36.000 0.00 0.00 42.50 4.26
4026 8468 8.939929 TCTACAGTATTTCAAGATTTGCTTCAG 58.060 33.333 0.00 0.00 33.60 3.02
4027 8469 8.846943 TCTACAGTATTTCAAGATTTGCTTCA 57.153 30.769 0.00 0.00 33.60 3.02
4063 8506 7.402054 ACATTCAATATTCCTGTACCAGACAA 58.598 34.615 0.00 0.00 37.70 3.18
4221 8966 8.243289 GCAAGTGCAACATAATTTTAGAACAT 57.757 30.769 0.00 0.00 41.43 2.71
4362 9200 5.243730 ACAATCTATGAAAACACCAAGTGGG 59.756 40.000 1.69 0.00 44.81 4.61
4363 9201 6.331369 ACAATCTATGAAAACACCAAGTGG 57.669 37.500 0.00 0.00 37.94 4.00
4605 9578 6.347888 GCCACATCAAATGGAGAAATTTGTTG 60.348 38.462 14.58 14.58 44.92 3.33
4682 9764 6.035112 GTGTTCAACACTCTACATAGCTTAGC 59.965 42.308 13.77 0.00 45.27 3.09
4853 9944 4.877823 CAGCTTGAATGTTGTATCAGCCTA 59.122 41.667 0.00 0.00 0.00 3.93
4969 10067 1.794714 TGCTCTCCAACTAGATCCCC 58.205 55.000 0.00 0.00 0.00 4.81
5109 10433 9.139726 GTAAATTAATAAGCAATACGTCGTGTG 57.860 33.333 8.47 7.31 0.00 3.82
5134 10458 5.957842 AACAACGTGAAATCATACATGGT 57.042 34.783 0.00 0.00 0.00 3.55
5154 10478 5.525378 AGATCAGTTTCAGTCAGTGACAAAC 59.475 40.000 24.73 23.41 33.71 2.93
5303 10639 5.948758 GGAGGAAAAGAACTTCTCATGGAAT 59.051 40.000 0.00 0.00 33.01 3.01
5326 10666 4.191544 TCAAAGATTCACATTAGCCGAGG 58.808 43.478 0.00 0.00 0.00 4.63
5363 10703 3.135712 ACACCACACACATTAACAGAGGA 59.864 43.478 0.00 0.00 0.00 3.71
5428 10768 6.093082 GGCTTGTTCAATTTACGTGTACCTAT 59.907 38.462 0.00 0.00 0.00 2.57
5437 10777 6.808212 AGATTGATTGGCTTGTTCAATTTACG 59.192 34.615 0.00 0.00 39.52 3.18
5474 10814 0.994247 TGCAGATGGAGGTGGAACAT 59.006 50.000 0.00 0.00 44.52 2.71
5482 10822 5.674525 TCAACTTAATACTGCAGATGGAGG 58.325 41.667 23.35 8.66 37.85 4.30
5752 11349 7.909121 CAGAGCAAATCAAAGATCAGTATCAAC 59.091 37.037 0.00 0.00 34.28 3.18
5877 11496 5.669848 GCACTCAAAAGAGACGAGCATAAAG 60.670 44.000 0.00 0.00 0.00 1.85
5914 11538 2.078392 CGTTGCCAACCTAAACCGTAT 58.922 47.619 1.21 0.00 0.00 3.06
5986 11866 1.037030 AGGGGTGTGCATTAATGGCG 61.037 55.000 17.02 0.00 0.00 5.69
6249 12242 7.342284 TGCTATAGCTCTACTTTAGTGAAAGGT 59.658 37.037 24.61 0.00 43.01 3.50
6250 12243 7.717568 TGCTATAGCTCTACTTTAGTGAAAGG 58.282 38.462 24.61 0.00 43.01 3.11
6251 12244 7.865385 CCTGCTATAGCTCTACTTTAGTGAAAG 59.135 40.741 24.61 8.19 43.65 2.62
6366 12369 1.176527 CAATCCACGGGCAAGACAAT 58.823 50.000 0.00 0.00 0.00 2.71
6464 12469 6.509418 TTTAAACTAGCCCATGTTGATGTC 57.491 37.500 0.00 0.00 0.00 3.06
6511 12516 8.215899 GCAGAGCGCGAATTAATATAATTTTT 57.784 30.769 12.10 0.00 0.00 1.94
6512 12517 7.781763 GCAGAGCGCGAATTAATATAATTTT 57.218 32.000 12.10 0.00 0.00 1.82
6528 12533 1.449246 AACATGGAGAGCAGAGCGC 60.449 57.895 0.00 0.00 42.91 5.92
6529 12534 1.703438 GCAACATGGAGAGCAGAGCG 61.703 60.000 0.00 0.00 0.00 5.03
6530 12535 0.392729 AGCAACATGGAGAGCAGAGC 60.393 55.000 0.00 0.00 0.00 4.09
6536 12541 2.295885 GATTGGGAGCAACATGGAGAG 58.704 52.381 0.00 0.00 0.00 3.20
6546 12551 2.342650 GCAAAGGCGATTGGGAGCA 61.343 57.895 7.92 0.00 34.54 4.26
6557 12562 2.183555 GCATCCAGCAGCAAAGGC 59.816 61.111 0.00 0.00 44.79 4.35
6558 12563 2.488355 CGCATCCAGCAGCAAAGG 59.512 61.111 0.00 0.00 46.13 3.11
6559 12564 2.488355 CCGCATCCAGCAGCAAAG 59.512 61.111 0.00 0.00 46.13 2.77
6560 12565 3.751246 GCCGCATCCAGCAGCAAA 61.751 61.111 0.00 0.00 46.01 3.68
6564 12569 3.506096 CACAGCCGCATCCAGCAG 61.506 66.667 0.00 0.00 46.13 4.24
6569 12574 2.590007 CTAGCCACAGCCGCATCC 60.590 66.667 0.00 0.00 41.25 3.51
6570 12575 2.590007 CCTAGCCACAGCCGCATC 60.590 66.667 0.00 0.00 41.25 3.91
6571 12576 4.864334 GCCTAGCCACAGCCGCAT 62.864 66.667 0.00 0.00 41.25 4.73
6589 12594 4.711949 AGCCACCTTGAGCCGCAG 62.712 66.667 0.00 0.00 0.00 5.18
6591 12596 4.704833 TCAGCCACCTTGAGCCGC 62.705 66.667 0.00 0.00 0.00 6.53
6592 12597 1.580845 CTTTCAGCCACCTTGAGCCG 61.581 60.000 0.00 0.00 0.00 5.52
6593 12598 1.246737 CCTTTCAGCCACCTTGAGCC 61.247 60.000 0.00 0.00 0.00 4.70
6594 12599 0.250901 TCCTTTCAGCCACCTTGAGC 60.251 55.000 0.00 0.00 0.00 4.26
6595 12600 1.612726 CCTCCTTTCAGCCACCTTGAG 60.613 57.143 0.00 0.00 0.00 3.02
6596 12601 0.401738 CCTCCTTTCAGCCACCTTGA 59.598 55.000 0.00 0.00 0.00 3.02
6597 12602 1.246737 GCCTCCTTTCAGCCACCTTG 61.247 60.000 0.00 0.00 0.00 3.61
6598 12603 1.075659 GCCTCCTTTCAGCCACCTT 59.924 57.895 0.00 0.00 0.00 3.50
6599 12604 1.504275 ATGCCTCCTTTCAGCCACCT 61.504 55.000 0.00 0.00 0.00 4.00
6600 12605 0.613012 AATGCCTCCTTTCAGCCACC 60.613 55.000 0.00 0.00 0.00 4.61
6601 12606 0.529378 CAATGCCTCCTTTCAGCCAC 59.471 55.000 0.00 0.00 0.00 5.01
6602 12607 0.612732 CCAATGCCTCCTTTCAGCCA 60.613 55.000 0.00 0.00 0.00 4.75
6603 12608 0.613012 ACCAATGCCTCCTTTCAGCC 60.613 55.000 0.00 0.00 0.00 4.85
6604 12609 0.529378 CACCAATGCCTCCTTTCAGC 59.471 55.000 0.00 0.00 0.00 4.26
6605 12610 2.205022 TCACCAATGCCTCCTTTCAG 57.795 50.000 0.00 0.00 0.00 3.02
6606 12611 2.905415 ATCACCAATGCCTCCTTTCA 57.095 45.000 0.00 0.00 0.00 2.69
6607 12612 3.629398 CAGTATCACCAATGCCTCCTTTC 59.371 47.826 0.00 0.00 0.00 2.62
6608 12613 3.266772 TCAGTATCACCAATGCCTCCTTT 59.733 43.478 0.00 0.00 0.00 3.11
6609 12614 2.846206 TCAGTATCACCAATGCCTCCTT 59.154 45.455 0.00 0.00 0.00 3.36
6610 12615 2.171448 GTCAGTATCACCAATGCCTCCT 59.829 50.000 0.00 0.00 0.00 3.69
6611 12616 2.171448 AGTCAGTATCACCAATGCCTCC 59.829 50.000 0.00 0.00 0.00 4.30
6612 12617 3.201290 CAGTCAGTATCACCAATGCCTC 58.799 50.000 0.00 0.00 0.00 4.70
6613 12618 2.092753 CCAGTCAGTATCACCAATGCCT 60.093 50.000 0.00 0.00 0.00 4.75
6614 12619 2.092968 TCCAGTCAGTATCACCAATGCC 60.093 50.000 0.00 0.00 0.00 4.40
6615 12620 3.201290 CTCCAGTCAGTATCACCAATGC 58.799 50.000 0.00 0.00 0.00 3.56
6616 12621 3.201290 GCTCCAGTCAGTATCACCAATG 58.799 50.000 0.00 0.00 0.00 2.82
6617 12622 2.159043 CGCTCCAGTCAGTATCACCAAT 60.159 50.000 0.00 0.00 0.00 3.16
6618 12623 1.204704 CGCTCCAGTCAGTATCACCAA 59.795 52.381 0.00 0.00 0.00 3.67
6619 12624 0.817654 CGCTCCAGTCAGTATCACCA 59.182 55.000 0.00 0.00 0.00 4.17
6620 12625 0.103208 CCGCTCCAGTCAGTATCACC 59.897 60.000 0.00 0.00 0.00 4.02
6621 12626 0.528684 GCCGCTCCAGTCAGTATCAC 60.529 60.000 0.00 0.00 0.00 3.06
6622 12627 0.684479 AGCCGCTCCAGTCAGTATCA 60.684 55.000 0.00 0.00 0.00 2.15
6623 12628 0.249238 CAGCCGCTCCAGTCAGTATC 60.249 60.000 0.00 0.00 0.00 2.24
6624 12629 1.680522 CCAGCCGCTCCAGTCAGTAT 61.681 60.000 0.00 0.00 0.00 2.12
6625 12630 2.351244 CCAGCCGCTCCAGTCAGTA 61.351 63.158 0.00 0.00 0.00 2.74
6626 12631 3.699894 CCAGCCGCTCCAGTCAGT 61.700 66.667 0.00 0.00 0.00 3.41
6627 12632 4.463879 CCCAGCCGCTCCAGTCAG 62.464 72.222 0.00 0.00 0.00 3.51
6652 12657 4.752101 TCCCAACAACAACAACAACAAAAG 59.248 37.500 0.00 0.00 0.00 2.27
6670 12675 1.289160 CTCAAGGTCCTCCATCCCAA 58.711 55.000 0.00 0.00 35.89 4.12
6671 12676 0.119155 ACTCAAGGTCCTCCATCCCA 59.881 55.000 0.00 0.00 35.89 4.37
6672 12677 0.833949 GACTCAAGGTCCTCCATCCC 59.166 60.000 0.00 0.00 38.93 3.85
6673 12678 1.872773 AGACTCAAGGTCCTCCATCC 58.127 55.000 0.00 0.00 45.54 3.51
6674 12679 2.834549 TCAAGACTCAAGGTCCTCCATC 59.165 50.000 0.00 0.00 45.54 3.51
6675 12680 2.907892 TCAAGACTCAAGGTCCTCCAT 58.092 47.619 0.00 0.00 45.54 3.41
6676 12681 2.398754 TCAAGACTCAAGGTCCTCCA 57.601 50.000 0.00 0.00 45.54 3.86
6746 13830 9.032420 GTTCTCTGAAATCCCTAACTTTATACG 57.968 37.037 0.00 0.00 0.00 3.06
6750 13834 7.569599 AGGTTCTCTGAAATCCCTAACTTTA 57.430 36.000 0.00 0.00 0.00 1.85
6780 13864 2.250008 TCTATGGGTGAGGAGGAATCCA 59.750 50.000 0.61 0.00 0.00 3.41
6781 13865 2.977808 TCTATGGGTGAGGAGGAATCC 58.022 52.381 0.00 0.00 0.00 3.01
6782 13866 5.574970 AAATCTATGGGTGAGGAGGAATC 57.425 43.478 0.00 0.00 0.00 2.52
6783 13867 6.131961 CAAAAATCTATGGGTGAGGAGGAAT 58.868 40.000 0.00 0.00 0.00 3.01
6784 13868 5.509498 CAAAAATCTATGGGTGAGGAGGAA 58.491 41.667 0.00 0.00 0.00 3.36
6785 13869 4.628715 GCAAAAATCTATGGGTGAGGAGGA 60.629 45.833 0.00 0.00 0.00 3.71
6786 13870 3.633986 GCAAAAATCTATGGGTGAGGAGG 59.366 47.826 0.00 0.00 0.00 4.30
6787 13871 3.313526 CGCAAAAATCTATGGGTGAGGAG 59.686 47.826 0.00 0.00 0.00 3.69
6788 13872 3.278574 CGCAAAAATCTATGGGTGAGGA 58.721 45.455 0.00 0.00 0.00 3.71
6789 13873 3.016736 ACGCAAAAATCTATGGGTGAGG 58.983 45.455 0.00 0.00 40.65 3.86
6793 13877 3.080300 TCCACGCAAAAATCTATGGGT 57.920 42.857 0.00 0.00 42.61 4.51
6794 13878 4.821805 AGTATCCACGCAAAAATCTATGGG 59.178 41.667 0.00 0.00 35.78 4.00
6795 13879 5.990408 GAGTATCCACGCAAAAATCTATGG 58.010 41.667 0.00 0.00 0.00 2.74
6812 13896 6.601332 TGAAATTTATGGGTGAGGGAGTATC 58.399 40.000 0.00 0.00 0.00 2.24
6813 13897 6.389869 TCTGAAATTTATGGGTGAGGGAGTAT 59.610 38.462 0.00 0.00 0.00 2.12
6814 13898 5.729229 TCTGAAATTTATGGGTGAGGGAGTA 59.271 40.000 0.00 0.00 0.00 2.59
6815 13899 4.540099 TCTGAAATTTATGGGTGAGGGAGT 59.460 41.667 0.00 0.00 0.00 3.85
6816 13900 5.104360 TCTCTGAAATTTATGGGTGAGGGAG 60.104 44.000 0.00 0.00 0.00 4.30
6817 13901 4.788075 TCTCTGAAATTTATGGGTGAGGGA 59.212 41.667 0.00 0.00 0.00 4.20
6818 13902 5.116084 TCTCTGAAATTTATGGGTGAGGG 57.884 43.478 0.00 0.00 0.00 4.30
6819 13903 5.358160 GGTTCTCTGAAATTTATGGGTGAGG 59.642 44.000 0.00 0.00 0.00 3.86
6820 13904 6.183347 AGGTTCTCTGAAATTTATGGGTGAG 58.817 40.000 0.00 0.00 0.00 3.51
6821 13905 6.139679 AGGTTCTCTGAAATTTATGGGTGA 57.860 37.500 0.00 0.00 0.00 4.02
6822 13906 6.840780 AAGGTTCTCTGAAATTTATGGGTG 57.159 37.500 0.00 0.00 0.00 4.61
6823 13907 6.603599 GCTAAGGTTCTCTGAAATTTATGGGT 59.396 38.462 0.00 0.00 0.00 4.51
6824 13908 6.039829 GGCTAAGGTTCTCTGAAATTTATGGG 59.960 42.308 0.00 0.00 0.00 4.00
6825 13909 6.830838 AGGCTAAGGTTCTCTGAAATTTATGG 59.169 38.462 0.00 0.00 0.00 2.74
6826 13910 7.201767 CCAGGCTAAGGTTCTCTGAAATTTATG 60.202 40.741 0.00 0.00 0.00 1.90
6827 13911 6.830838 CCAGGCTAAGGTTCTCTGAAATTTAT 59.169 38.462 0.00 0.00 0.00 1.40
6828 13912 6.012858 TCCAGGCTAAGGTTCTCTGAAATTTA 60.013 38.462 0.00 0.00 0.00 1.40
6829 13913 5.012893 CCAGGCTAAGGTTCTCTGAAATTT 58.987 41.667 0.00 0.00 0.00 1.82
6830 13914 4.289672 TCCAGGCTAAGGTTCTCTGAAATT 59.710 41.667 0.00 0.00 0.00 1.82
6831 13915 3.846588 TCCAGGCTAAGGTTCTCTGAAAT 59.153 43.478 0.00 0.00 0.00 2.17
6832 13916 3.248024 TCCAGGCTAAGGTTCTCTGAAA 58.752 45.455 0.00 0.00 0.00 2.69
6833 13917 2.902608 TCCAGGCTAAGGTTCTCTGAA 58.097 47.619 0.00 0.00 0.00 3.02
6834 13918 2.623418 TCCAGGCTAAGGTTCTCTGA 57.377 50.000 0.00 0.00 0.00 3.27
6835 13919 3.454082 AGAATCCAGGCTAAGGTTCTCTG 59.546 47.826 6.44 0.00 0.00 3.35
6836 13920 3.709141 GAGAATCCAGGCTAAGGTTCTCT 59.291 47.826 22.99 10.37 38.64 3.10
6837 13921 4.066646 GAGAATCCAGGCTAAGGTTCTC 57.933 50.000 18.56 18.56 36.79 2.87
6876 13960 3.243234 GCTCGTGTACTAGCAGATCATGT 60.243 47.826 9.61 0.00 38.63 3.21
6934 14018 6.627395 TGAATGTGTACTTTGATTCGGTTT 57.373 33.333 0.00 0.00 0.00 3.27
6965 14049 7.523052 CGTGGATTTATTTTTCAGGAAGTCCAA 60.523 37.037 0.00 0.00 38.89 3.53
6967 14051 6.072119 ACGTGGATTTATTTTTCAGGAAGTCC 60.072 38.462 0.00 0.00 0.00 3.85
7076 14185 3.755905 TGAAGGCAATTTGCGAACTATGA 59.244 39.130 14.83 0.00 46.21 2.15
7082 14191 3.316283 GTTCATGAAGGCAATTTGCGAA 58.684 40.909 8.80 8.77 46.21 4.70
7129 14240 1.003118 TGAAGGTGTAGAAGCGGCAAT 59.997 47.619 1.45 0.00 0.00 3.56
7130 14241 0.394938 TGAAGGTGTAGAAGCGGCAA 59.605 50.000 1.45 0.00 0.00 4.52
7159 14270 1.843851 AGGCTCGGGGTTTATGATTGA 59.156 47.619 0.00 0.00 0.00 2.57
7161 14272 1.143073 GGAGGCTCGGGGTTTATGATT 59.857 52.381 8.69 0.00 0.00 2.57
7166 14277 0.917333 AATGGGAGGCTCGGGGTTTA 60.917 55.000 8.69 0.00 0.00 2.01
7168 14279 0.917333 TTAATGGGAGGCTCGGGGTT 60.917 55.000 8.69 3.61 0.00 4.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.