Multiple sequence alignment - TraesCS3A01G123300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G123300 chr3A 100.000 2941 0 0 1 2941 99298569 99295629 0.000000e+00 5432.0
1 TraesCS3A01G123300 chr3A 91.736 968 62 11 897 1846 99388662 99387695 0.000000e+00 1328.0
2 TraesCS3A01G123300 chr3A 94.595 74 2 2 2109 2181 99387492 99387420 2.400000e-21 113.0
3 TraesCS3A01G123300 chr3D 89.192 1064 94 14 805 1859 83502840 83501789 0.000000e+00 1308.0
4 TraesCS3A01G123300 chr3D 86.360 1107 127 18 1001 2092 83601491 83600394 0.000000e+00 1186.0
5 TraesCS3A01G123300 chr3D 81.274 769 108 29 2179 2932 83465760 83466507 9.080000e-165 590.0
6 TraesCS3A01G123300 chr3D 77.933 358 65 9 1125 1474 442397582 442397933 8.260000e-51 211.0
7 TraesCS3A01G123300 chr3D 79.310 290 33 8 455 722 563612358 563612642 8.380000e-41 178.0
8 TraesCS3A01G123300 chr3D 93.182 44 3 0 455 498 557745917 557745874 6.800000e-07 65.8
9 TraesCS3A01G123300 chr3B 85.358 1202 132 30 1001 2176 130187145 130185962 0.000000e+00 1205.0
10 TraesCS3A01G123300 chr3B 92.014 576 37 8 897 1470 130130638 130130070 0.000000e+00 800.0
11 TraesCS3A01G123300 chr3B 93.067 375 24 2 1805 2178 130128491 130128118 5.540000e-152 547.0
12 TraesCS3A01G123300 chr3B 93.056 216 15 0 1469 1684 130128702 130128487 1.700000e-82 316.0
13 TraesCS3A01G123300 chr3B 86.885 183 15 4 2179 2357 130061651 130061828 2.310000e-46 196.0
14 TraesCS3A01G123300 chr3B 89.000 100 7 1 2258 2357 130061865 130061960 1.430000e-23 121.0
15 TraesCS3A01G123300 chr3B 80.714 140 11 5 452 576 637133959 637134097 8.680000e-16 95.3
16 TraesCS3A01G123300 chr2B 78.899 327 55 10 1131 1449 143133066 143132746 2.970000e-50 209.0
17 TraesCS3A01G123300 chr2B 83.333 186 31 0 1625 1810 140520338 140520153 3.900000e-39 172.0
18 TraesCS3A01G123300 chr2B 82.258 186 25 8 72 254 136147457 136147277 1.410000e-33 154.0
19 TraesCS3A01G123300 chr2B 75.697 251 39 14 490 722 230892841 230892595 4.010000e-19 106.0
20 TraesCS3A01G123300 chr2D 77.011 348 64 12 1131 1469 90321766 90321426 5.010000e-43 185.0
21 TraesCS3A01G123300 chr2D 75.749 334 65 12 1125 1449 118845481 118845807 1.410000e-33 154.0
22 TraesCS3A01G123300 chr2D 84.354 147 23 0 1664 1810 87580532 87580386 8.500000e-31 145.0
23 TraesCS3A01G123300 chr2D 82.550 149 15 3 584 722 473137474 473137327 1.430000e-23 121.0
24 TraesCS3A01G123300 chr2D 82.707 133 21 2 591 722 558242358 558242227 1.850000e-22 117.0
25 TraesCS3A01G123300 chr2D 77.830 212 29 9 515 722 88287341 88287538 6.660000e-22 115.0
26 TraesCS3A01G123300 chr2D 75.217 230 30 12 470 681 593363754 593363534 1.880000e-12 84.2
27 TraesCS3A01G123300 chr2D 85.333 75 7 4 498 570 650954260 650954332 1.130000e-09 75.0
28 TraesCS3A01G123300 chr2D 82.192 73 9 4 500 570 562236471 562236401 3.170000e-05 60.2
29 TraesCS3A01G123300 chr7B 83.108 148 22 3 576 722 1096857 1096712 6.610000e-27 132.0
30 TraesCS3A01G123300 chr7B 90.000 60 6 0 511 570 685994571 685994512 8.740000e-11 78.7
31 TraesCS3A01G123300 chr5A 76.834 259 40 13 484 725 558336374 558336629 8.560000e-26 128.0
32 TraesCS3A01G123300 chr5B 77.778 225 31 14 484 692 536326632 536326853 1.430000e-23 121.0
33 TraesCS3A01G123300 chr7D 79.195 149 29 2 576 723 272093380 272093233 5.190000e-18 102.0
34 TraesCS3A01G123300 chr7D 84.932 73 7 4 500 570 166207268 166207338 1.460000e-08 71.3
35 TraesCS3A01G123300 chr4A 93.750 64 4 0 507 570 543330714 543330777 2.410000e-16 97.1
36 TraesCS3A01G123300 chr4A 78.808 151 20 4 498 648 48526223 48526361 1.120000e-14 91.6
37 TraesCS3A01G123300 chr4A 97.436 39 1 0 460 498 521896005 521895967 1.890000e-07 67.6
38 TraesCS3A01G123300 chr1B 73.993 273 50 13 484 740 174648822 174648555 1.120000e-14 91.6
39 TraesCS3A01G123300 chr1B 84.615 65 9 1 507 570 115952539 115952475 2.450000e-06 63.9
40 TraesCS3A01G123300 chr2A 84.337 83 12 1 489 570 194947886 194947968 2.430000e-11 80.5
41 TraesCS3A01G123300 chr1A 94.872 39 2 0 455 493 442797335 442797297 8.800000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G123300 chr3A 99295629 99298569 2940 True 5432.000000 5432 100.000000 1 2941 1 chr3A.!!$R1 2940
1 TraesCS3A01G123300 chr3A 99387420 99388662 1242 True 720.500000 1328 93.165500 897 2181 2 chr3A.!!$R2 1284
2 TraesCS3A01G123300 chr3D 83501789 83502840 1051 True 1308.000000 1308 89.192000 805 1859 1 chr3D.!!$R1 1054
3 TraesCS3A01G123300 chr3D 83600394 83601491 1097 True 1186.000000 1186 86.360000 1001 2092 1 chr3D.!!$R2 1091
4 TraesCS3A01G123300 chr3D 83465760 83466507 747 False 590.000000 590 81.274000 2179 2932 1 chr3D.!!$F1 753
5 TraesCS3A01G123300 chr3B 130185962 130187145 1183 True 1205.000000 1205 85.358000 1001 2176 1 chr3B.!!$R1 1175
6 TraesCS3A01G123300 chr3B 130128118 130130638 2520 True 554.333333 800 92.712333 897 2178 3 chr3B.!!$R2 1281

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
604 605 0.035439 ATCATGAAAACGACGGGCCT 60.035 50.0 0.84 0.0 0.0 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2247 3676 0.31812 AAAAATGGCAGGTCAAGCGG 59.682 50.0 0.0 0.0 0.0 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.605257 TCCATTAGGATCACCCCTACG 58.395 52.381 0.00 0.00 39.61 3.51
22 23 1.002087 CCATTAGGATCACCCCTACGC 59.998 57.143 0.00 0.00 38.45 4.42
23 24 1.691976 CATTAGGATCACCCCTACGCA 59.308 52.381 0.00 0.00 38.45 5.24
24 25 1.868713 TTAGGATCACCCCTACGCAA 58.131 50.000 0.00 0.00 38.45 4.85
25 26 1.868713 TAGGATCACCCCTACGCAAA 58.131 50.000 0.00 0.00 37.74 3.68
26 27 0.988832 AGGATCACCCCTACGCAAAA 59.011 50.000 0.00 0.00 34.07 2.44
27 28 1.065418 AGGATCACCCCTACGCAAAAG 60.065 52.381 0.00 0.00 34.07 2.27
28 29 0.733150 GATCACCCCTACGCAAAAGC 59.267 55.000 0.00 0.00 0.00 3.51
29 30 0.328258 ATCACCCCTACGCAAAAGCT 59.672 50.000 0.00 0.00 0.00 3.74
30 31 0.321298 TCACCCCTACGCAAAAGCTC 60.321 55.000 0.00 0.00 0.00 4.09
31 32 0.321653 CACCCCTACGCAAAAGCTCT 60.322 55.000 0.00 0.00 0.00 4.09
32 33 0.321653 ACCCCTACGCAAAAGCTCTG 60.322 55.000 0.00 0.00 0.00 3.35
33 34 1.026718 CCCCTACGCAAAAGCTCTGG 61.027 60.000 0.00 0.00 0.00 3.86
34 35 1.648467 CCCTACGCAAAAGCTCTGGC 61.648 60.000 0.00 0.00 39.06 4.85
44 45 3.660621 GCTCTGGCTTTTGACGCT 58.339 55.556 0.00 0.00 35.22 5.07
45 46 1.499502 GCTCTGGCTTTTGACGCTC 59.500 57.895 0.00 0.00 35.22 5.03
46 47 1.784062 CTCTGGCTTTTGACGCTCG 59.216 57.895 0.00 0.00 0.00 5.03
47 48 0.946221 CTCTGGCTTTTGACGCTCGT 60.946 55.000 0.00 0.00 0.00 4.18
48 49 1.205064 CTGGCTTTTGACGCTCGTG 59.795 57.895 0.00 0.00 0.00 4.35
49 50 2.175184 CTGGCTTTTGACGCTCGTGG 62.175 60.000 0.00 0.00 0.00 4.94
50 51 2.556287 GCTTTTGACGCTCGTGGG 59.444 61.111 0.00 0.00 0.00 4.61
51 52 2.556287 CTTTTGACGCTCGTGGGC 59.444 61.111 0.00 0.00 0.00 5.36
52 53 2.203084 TTTTGACGCTCGTGGGCA 60.203 55.556 0.00 0.00 0.00 5.36
53 54 1.577328 CTTTTGACGCTCGTGGGCAT 61.577 55.000 0.00 0.00 0.00 4.40
54 55 1.573829 TTTTGACGCTCGTGGGCATC 61.574 55.000 0.00 0.00 0.00 3.91
55 56 4.794439 TGACGCTCGTGGGCATCG 62.794 66.667 0.00 0.00 0.00 3.84
56 57 4.796231 GACGCTCGTGGGCATCGT 62.796 66.667 0.00 0.00 35.98 3.73
57 58 3.405592 GACGCTCGTGGGCATCGTA 62.406 63.158 0.00 0.00 33.21 3.43
58 59 2.027605 CGCTCGTGGGCATCGTAT 59.972 61.111 0.00 0.00 0.00 3.06
59 60 1.284715 CGCTCGTGGGCATCGTATA 59.715 57.895 0.00 0.00 0.00 1.47
60 61 0.729478 CGCTCGTGGGCATCGTATAG 60.729 60.000 0.00 0.00 0.00 1.31
61 62 0.388649 GCTCGTGGGCATCGTATAGG 60.389 60.000 0.00 0.00 0.00 2.57
62 63 0.243907 CTCGTGGGCATCGTATAGGG 59.756 60.000 0.00 0.00 0.00 3.53
63 64 0.178984 TCGTGGGCATCGTATAGGGA 60.179 55.000 0.00 0.00 0.00 4.20
64 65 0.243907 CGTGGGCATCGTATAGGGAG 59.756 60.000 0.00 0.00 0.00 4.30
65 66 1.339097 GTGGGCATCGTATAGGGAGT 58.661 55.000 0.00 0.00 0.00 3.85
66 67 1.692519 GTGGGCATCGTATAGGGAGTT 59.307 52.381 0.00 0.00 0.00 3.01
67 68 2.104281 GTGGGCATCGTATAGGGAGTTT 59.896 50.000 0.00 0.00 0.00 2.66
68 69 2.367567 TGGGCATCGTATAGGGAGTTTC 59.632 50.000 0.00 0.00 0.00 2.78
69 70 2.609737 GGGCATCGTATAGGGAGTTTCG 60.610 54.545 0.00 0.00 0.00 3.46
70 71 2.609737 GGCATCGTATAGGGAGTTTCGG 60.610 54.545 0.00 0.00 0.00 4.30
71 72 2.673833 CATCGTATAGGGAGTTTCGGC 58.326 52.381 0.00 0.00 0.00 5.54
72 73 1.035139 TCGTATAGGGAGTTTCGGCC 58.965 55.000 0.00 0.00 0.00 6.13
73 74 0.318445 CGTATAGGGAGTTTCGGCCG 60.318 60.000 22.12 22.12 0.00 6.13
74 75 1.035139 GTATAGGGAGTTTCGGCCGA 58.965 55.000 27.28 27.28 0.00 5.54
75 76 1.000496 GTATAGGGAGTTTCGGCCGAG 60.000 57.143 29.20 0.00 0.00 4.63
76 77 2.029307 ATAGGGAGTTTCGGCCGAGC 62.029 60.000 29.20 23.85 0.00 5.03
77 78 4.083862 GGGAGTTTCGGCCGAGCT 62.084 66.667 29.20 27.97 0.00 4.09
78 79 2.047179 GGAGTTTCGGCCGAGCTT 60.047 61.111 29.20 17.18 0.00 3.74
79 80 1.671379 GGAGTTTCGGCCGAGCTTT 60.671 57.895 29.20 15.27 0.00 3.51
80 81 1.497722 GAGTTTCGGCCGAGCTTTG 59.502 57.895 29.20 0.00 0.00 2.77
81 82 2.126850 GTTTCGGCCGAGCTTTGC 60.127 61.111 29.20 11.88 0.00 3.68
82 83 2.281484 TTTCGGCCGAGCTTTGCT 60.281 55.556 29.20 0.00 43.88 3.91
83 84 1.004320 TTTCGGCCGAGCTTTGCTA 60.004 52.632 29.20 8.04 39.88 3.49
84 85 1.296056 TTTCGGCCGAGCTTTGCTAC 61.296 55.000 29.20 0.00 39.88 3.58
85 86 2.434185 CGGCCGAGCTTTGCTACA 60.434 61.111 24.07 0.00 39.88 2.74
86 87 1.815421 CGGCCGAGCTTTGCTACAT 60.815 57.895 24.07 0.00 39.88 2.29
87 88 1.766143 CGGCCGAGCTTTGCTACATC 61.766 60.000 24.07 0.00 39.88 3.06
88 89 0.462759 GGCCGAGCTTTGCTACATCT 60.463 55.000 8.13 0.00 39.88 2.90
89 90 1.202533 GGCCGAGCTTTGCTACATCTA 60.203 52.381 8.13 0.00 39.88 1.98
90 91 1.861575 GCCGAGCTTTGCTACATCTAC 59.138 52.381 0.00 0.00 39.88 2.59
91 92 2.120232 CCGAGCTTTGCTACATCTACG 58.880 52.381 0.00 0.00 39.88 3.51
92 93 2.479730 CCGAGCTTTGCTACATCTACGT 60.480 50.000 0.00 0.00 39.88 3.57
93 94 3.242969 CCGAGCTTTGCTACATCTACGTA 60.243 47.826 0.00 0.00 39.88 3.57
94 95 4.348656 CGAGCTTTGCTACATCTACGTAA 58.651 43.478 0.00 0.00 39.88 3.18
95 96 4.796830 CGAGCTTTGCTACATCTACGTAAA 59.203 41.667 0.00 0.00 39.88 2.01
96 97 5.287752 CGAGCTTTGCTACATCTACGTAAAA 59.712 40.000 0.00 0.00 39.88 1.52
97 98 6.506513 CGAGCTTTGCTACATCTACGTAAAAG 60.507 42.308 0.00 2.45 39.88 2.27
98 99 5.581085 AGCTTTGCTACATCTACGTAAAAGG 59.419 40.000 11.85 2.15 36.99 3.11
99 100 5.350640 GCTTTGCTACATCTACGTAAAAGGT 59.649 40.000 11.85 7.05 0.00 3.50
100 101 6.672357 GCTTTGCTACATCTACGTAAAAGGTG 60.672 42.308 11.85 5.20 0.00 4.00
101 102 5.395682 TGCTACATCTACGTAAAAGGTGT 57.604 39.130 7.79 7.79 41.19 4.16
102 103 5.786311 TGCTACATCTACGTAAAAGGTGTT 58.214 37.500 7.97 0.00 39.09 3.32
103 104 6.923012 TGCTACATCTACGTAAAAGGTGTTA 58.077 36.000 7.97 0.00 39.09 2.41
104 105 6.808212 TGCTACATCTACGTAAAAGGTGTTAC 59.192 38.462 7.97 2.52 39.09 2.50
116 117 8.409413 GTAAAAGGTGTTACGAAATTTACGTC 57.591 34.615 15.59 6.83 43.62 4.34
117 118 4.891277 AGGTGTTACGAAATTTACGTCG 57.109 40.909 15.59 7.22 43.62 5.12
118 119 4.545610 AGGTGTTACGAAATTTACGTCGA 58.454 39.130 15.59 6.88 43.62 4.20
119 120 4.618489 AGGTGTTACGAAATTTACGTCGAG 59.382 41.667 15.59 0.00 43.62 4.04
120 121 4.309993 GTGTTACGAAATTTACGTCGAGC 58.690 43.478 15.59 6.12 43.62 5.03
121 122 4.089065 GTGTTACGAAATTTACGTCGAGCT 59.911 41.667 15.59 0.00 43.62 4.09
122 123 4.681025 TGTTACGAAATTTACGTCGAGCTT 59.319 37.500 15.59 0.00 43.62 3.74
123 124 5.855925 TGTTACGAAATTTACGTCGAGCTTA 59.144 36.000 15.59 0.00 43.62 3.09
124 125 6.527722 TGTTACGAAATTTACGTCGAGCTTAT 59.472 34.615 15.59 0.00 43.62 1.73
125 126 5.371344 ACGAAATTTACGTCGAGCTTATG 57.629 39.130 0.00 0.00 39.87 1.90
126 127 4.860907 ACGAAATTTACGTCGAGCTTATGT 59.139 37.500 0.00 0.00 39.87 2.29
127 128 5.181084 CGAAATTTACGTCGAGCTTATGTG 58.819 41.667 0.00 0.00 39.64 3.21
128 129 5.464965 AAATTTACGTCGAGCTTATGTGG 57.535 39.130 0.00 0.00 0.00 4.17
129 130 1.917273 TTACGTCGAGCTTATGTGGC 58.083 50.000 0.00 0.00 0.00 5.01
130 131 0.101759 TACGTCGAGCTTATGTGGCC 59.898 55.000 0.00 0.00 0.00 5.36
131 132 1.141881 CGTCGAGCTTATGTGGCCT 59.858 57.895 3.32 0.00 0.00 5.19
132 133 0.384309 CGTCGAGCTTATGTGGCCTA 59.616 55.000 3.32 0.00 0.00 3.93
133 134 1.202371 CGTCGAGCTTATGTGGCCTAA 60.202 52.381 3.32 0.00 0.00 2.69
134 135 2.545952 CGTCGAGCTTATGTGGCCTAAT 60.546 50.000 3.32 0.00 0.00 1.73
135 136 3.467803 GTCGAGCTTATGTGGCCTAATT 58.532 45.455 3.32 0.00 0.00 1.40
136 137 3.877508 GTCGAGCTTATGTGGCCTAATTT 59.122 43.478 3.32 0.00 0.00 1.82
137 138 3.876914 TCGAGCTTATGTGGCCTAATTTG 59.123 43.478 3.32 0.00 0.00 2.32
138 139 3.003689 CGAGCTTATGTGGCCTAATTTGG 59.996 47.826 3.32 1.04 0.00 3.28
139 140 3.954258 GAGCTTATGTGGCCTAATTTGGT 59.046 43.478 3.32 0.00 0.00 3.67
140 141 4.352893 AGCTTATGTGGCCTAATTTGGTT 58.647 39.130 3.32 0.00 0.00 3.67
141 142 4.160252 AGCTTATGTGGCCTAATTTGGTTG 59.840 41.667 3.32 0.00 0.00 3.77
142 143 4.680440 GCTTATGTGGCCTAATTTGGTTGG 60.680 45.833 3.32 0.00 0.00 3.77
143 144 2.685106 TGTGGCCTAATTTGGTTGGA 57.315 45.000 3.32 0.00 0.00 3.53
144 145 2.964209 TGTGGCCTAATTTGGTTGGAA 58.036 42.857 3.32 0.00 0.00 3.53
145 146 2.896685 TGTGGCCTAATTTGGTTGGAAG 59.103 45.455 3.32 0.00 0.00 3.46
146 147 2.897326 GTGGCCTAATTTGGTTGGAAGT 59.103 45.455 3.32 0.00 0.00 3.01
147 148 4.083565 GTGGCCTAATTTGGTTGGAAGTA 58.916 43.478 3.32 0.00 0.00 2.24
148 149 4.525100 GTGGCCTAATTTGGTTGGAAGTAA 59.475 41.667 3.32 0.00 0.00 2.24
149 150 5.011227 GTGGCCTAATTTGGTTGGAAGTAAA 59.989 40.000 3.32 0.00 0.00 2.01
150 151 5.602978 TGGCCTAATTTGGTTGGAAGTAAAA 59.397 36.000 3.32 0.00 0.00 1.52
151 152 6.099845 TGGCCTAATTTGGTTGGAAGTAAAAA 59.900 34.615 3.32 0.00 0.00 1.94
169 170 1.632589 AAAAAGACCCATGCTCACCC 58.367 50.000 0.00 0.00 0.00 4.61
170 171 0.251787 AAAAGACCCATGCTCACCCC 60.252 55.000 0.00 0.00 0.00 4.95
171 172 1.434513 AAAGACCCATGCTCACCCCA 61.435 55.000 0.00 0.00 0.00 4.96
172 173 1.217057 AAGACCCATGCTCACCCCAT 61.217 55.000 0.00 0.00 0.00 4.00
173 174 1.454479 GACCCATGCTCACCCCATG 60.454 63.158 0.00 0.00 39.74 3.66
174 175 1.925285 GACCCATGCTCACCCCATGA 61.925 60.000 0.00 0.00 41.97 3.07
175 176 1.307309 CCCATGCTCACCCCATGAA 59.693 57.895 0.00 0.00 41.97 2.57
176 177 0.324552 CCCATGCTCACCCCATGAAA 60.325 55.000 0.00 0.00 41.97 2.69
177 178 1.690209 CCCATGCTCACCCCATGAAAT 60.690 52.381 0.00 0.00 41.97 2.17
178 179 2.112998 CCATGCTCACCCCATGAAATT 58.887 47.619 0.00 0.00 41.97 1.82
179 180 2.101917 CCATGCTCACCCCATGAAATTC 59.898 50.000 0.00 0.00 41.97 2.17
180 181 1.462616 TGCTCACCCCATGAAATTCG 58.537 50.000 0.00 0.00 36.69 3.34
181 182 0.101219 GCTCACCCCATGAAATTCGC 59.899 55.000 0.00 0.00 36.69 4.70
182 183 0.378257 CTCACCCCATGAAATTCGCG 59.622 55.000 0.00 0.00 36.69 5.87
183 184 1.029408 TCACCCCATGAAATTCGCGG 61.029 55.000 6.13 0.00 33.02 6.46
184 185 1.752694 ACCCCATGAAATTCGCGGG 60.753 57.895 6.13 11.41 36.59 6.13
185 186 3.119193 CCCATGAAATTCGCGGGG 58.881 61.111 6.13 1.55 32.88 5.73
186 187 2.489275 CCCATGAAATTCGCGGGGG 61.489 63.158 6.13 4.59 32.88 5.40
187 188 1.453015 CCATGAAATTCGCGGGGGA 60.453 57.895 6.13 0.00 0.00 4.81
188 189 1.447317 CCATGAAATTCGCGGGGGAG 61.447 60.000 6.13 0.00 0.00 4.30
189 190 1.823899 ATGAAATTCGCGGGGGAGC 60.824 57.895 6.13 0.00 0.00 4.70
190 191 2.437716 GAAATTCGCGGGGGAGCA 60.438 61.111 6.13 0.00 36.85 4.26
191 192 2.034999 AAATTCGCGGGGGAGCAA 59.965 55.556 6.13 0.00 36.85 3.91
192 193 1.379843 AAATTCGCGGGGGAGCAAT 60.380 52.632 6.13 0.00 36.85 3.56
193 194 1.384222 AAATTCGCGGGGGAGCAATC 61.384 55.000 6.13 0.00 36.85 2.67
194 195 2.550699 AATTCGCGGGGGAGCAATCA 62.551 55.000 6.13 0.00 36.85 2.57
195 196 2.947938 ATTCGCGGGGGAGCAATCAG 62.948 60.000 6.13 0.00 36.85 2.90
196 197 4.473520 CGCGGGGGAGCAATCAGT 62.474 66.667 0.00 0.00 36.85 3.41
197 198 2.514824 GCGGGGGAGCAATCAGTC 60.515 66.667 0.00 0.00 37.05 3.51
198 199 3.036429 GCGGGGGAGCAATCAGTCT 62.036 63.158 0.00 0.00 37.05 3.24
199 200 1.686325 GCGGGGGAGCAATCAGTCTA 61.686 60.000 0.00 0.00 37.05 2.59
200 201 1.051812 CGGGGGAGCAATCAGTCTAT 58.948 55.000 0.00 0.00 0.00 1.98
201 202 2.248248 CGGGGGAGCAATCAGTCTATA 58.752 52.381 0.00 0.00 0.00 1.31
202 203 2.232452 CGGGGGAGCAATCAGTCTATAG 59.768 54.545 0.00 0.00 0.00 1.31
203 204 2.569404 GGGGGAGCAATCAGTCTATAGG 59.431 54.545 0.00 0.00 0.00 2.57
204 205 3.511477 GGGGAGCAATCAGTCTATAGGA 58.489 50.000 0.00 0.00 0.00 2.94
205 206 3.904339 GGGGAGCAATCAGTCTATAGGAA 59.096 47.826 0.00 0.00 0.00 3.36
206 207 4.020662 GGGGAGCAATCAGTCTATAGGAAG 60.021 50.000 0.00 0.00 0.00 3.46
207 208 4.835615 GGGAGCAATCAGTCTATAGGAAGA 59.164 45.833 0.00 0.00 0.00 2.87
208 209 5.047377 GGGAGCAATCAGTCTATAGGAAGAG 60.047 48.000 0.00 0.00 0.00 2.85
209 210 5.772672 GGAGCAATCAGTCTATAGGAAGAGA 59.227 44.000 0.00 0.00 0.00 3.10
210 211 6.266558 GGAGCAATCAGTCTATAGGAAGAGAA 59.733 42.308 0.00 0.00 0.00 2.87
211 212 7.288810 AGCAATCAGTCTATAGGAAGAGAAG 57.711 40.000 0.00 0.00 0.00 2.85
212 213 6.838612 AGCAATCAGTCTATAGGAAGAGAAGT 59.161 38.462 0.00 0.00 0.00 3.01
213 214 7.344352 AGCAATCAGTCTATAGGAAGAGAAGTT 59.656 37.037 0.00 0.00 0.00 2.66
214 215 8.634444 GCAATCAGTCTATAGGAAGAGAAGTTA 58.366 37.037 0.00 0.00 0.00 2.24
217 218 9.875708 ATCAGTCTATAGGAAGAGAAGTTATGT 57.124 33.333 0.00 0.00 0.00 2.29
220 221 9.292195 AGTCTATAGGAAGAGAAGTTATGTAGC 57.708 37.037 0.00 0.00 0.00 3.58
221 222 9.069082 GTCTATAGGAAGAGAAGTTATGTAGCA 57.931 37.037 0.00 0.00 0.00 3.49
222 223 9.815306 TCTATAGGAAGAGAAGTTATGTAGCAT 57.185 33.333 0.00 0.00 0.00 3.79
226 227 7.501844 AGGAAGAGAAGTTATGTAGCATTACC 58.498 38.462 0.00 0.00 0.00 2.85
227 228 7.345914 AGGAAGAGAAGTTATGTAGCATTACCT 59.654 37.037 0.00 0.00 0.00 3.08
228 229 8.639761 GGAAGAGAAGTTATGTAGCATTACCTA 58.360 37.037 0.00 0.00 0.00 3.08
231 232 9.422681 AGAGAAGTTATGTAGCATTACCTAAGA 57.577 33.333 0.00 0.00 0.00 2.10
232 233 9.685828 GAGAAGTTATGTAGCATTACCTAAGAG 57.314 37.037 0.00 0.00 0.00 2.85
233 234 9.203163 AGAAGTTATGTAGCATTACCTAAGAGT 57.797 33.333 0.00 0.00 0.00 3.24
234 235 9.819267 GAAGTTATGTAGCATTACCTAAGAGTT 57.181 33.333 0.00 0.00 0.00 3.01
237 238 9.178427 GTTATGTAGCATTACCTAAGAGTTACG 57.822 37.037 0.00 0.00 0.00 3.18
238 239 6.140303 TGTAGCATTACCTAAGAGTTACGG 57.860 41.667 0.00 0.00 0.00 4.02
239 240 5.887598 TGTAGCATTACCTAAGAGTTACGGA 59.112 40.000 0.00 0.00 0.00 4.69
240 241 5.517322 AGCATTACCTAAGAGTTACGGAG 57.483 43.478 0.00 0.00 0.00 4.63
241 242 4.341520 AGCATTACCTAAGAGTTACGGAGG 59.658 45.833 0.00 0.00 0.00 4.30
242 243 4.099113 GCATTACCTAAGAGTTACGGAGGT 59.901 45.833 0.00 0.00 40.10 3.85
243 244 5.589192 CATTACCTAAGAGTTACGGAGGTG 58.411 45.833 9.61 0.00 38.37 4.00
244 245 3.166560 ACCTAAGAGTTACGGAGGTGT 57.833 47.619 0.00 0.00 37.19 4.16
245 246 4.307032 ACCTAAGAGTTACGGAGGTGTA 57.693 45.455 0.00 0.00 37.19 2.90
246 247 4.666512 ACCTAAGAGTTACGGAGGTGTAA 58.333 43.478 0.00 0.00 37.19 2.41
269 270 3.015516 TTTTTGTCTCGGCCTCACC 57.984 52.632 0.00 0.00 0.00 4.02
270 271 0.536460 TTTTTGTCTCGGCCTCACCC 60.536 55.000 0.00 0.00 33.26 4.61
271 272 2.406002 TTTTGTCTCGGCCTCACCCC 62.406 60.000 0.00 0.00 33.26 4.95
274 275 4.332543 TCTCGGCCTCACCCCCTT 62.333 66.667 0.00 0.00 33.26 3.95
275 276 4.101448 CTCGGCCTCACCCCCTTG 62.101 72.222 0.00 0.00 33.26 3.61
276 277 4.649705 TCGGCCTCACCCCCTTGA 62.650 66.667 0.00 0.00 33.26 3.02
277 278 3.646715 CGGCCTCACCCCCTTGAA 61.647 66.667 0.00 0.00 33.26 2.69
278 279 2.851045 GGCCTCACCCCCTTGAAA 59.149 61.111 0.00 0.00 0.00 2.69
279 280 1.304464 GGCCTCACCCCCTTGAAAG 60.304 63.158 0.00 0.00 0.00 2.62
280 281 1.304464 GCCTCACCCCCTTGAAAGG 60.304 63.158 1.81 1.81 46.06 3.11
291 292 2.726821 CCTTGAAAGGGCAATGCTAGA 58.273 47.619 4.82 0.00 42.66 2.43
292 293 2.424956 CCTTGAAAGGGCAATGCTAGAC 59.575 50.000 4.82 0.00 42.66 2.59
293 294 2.128771 TGAAAGGGCAATGCTAGACC 57.871 50.000 4.82 0.00 0.00 3.85
294 295 1.635487 TGAAAGGGCAATGCTAGACCT 59.365 47.619 4.82 0.00 0.00 3.85
295 296 2.843730 TGAAAGGGCAATGCTAGACCTA 59.156 45.455 4.82 0.00 0.00 3.08
296 297 3.265737 TGAAAGGGCAATGCTAGACCTAA 59.734 43.478 4.82 0.00 0.00 2.69
297 298 3.567478 AAGGGCAATGCTAGACCTAAG 57.433 47.619 4.82 0.00 0.00 2.18
298 299 2.482494 AGGGCAATGCTAGACCTAAGT 58.518 47.619 4.82 0.00 0.00 2.24
299 300 3.654273 AGGGCAATGCTAGACCTAAGTA 58.346 45.455 4.82 0.00 0.00 2.24
300 301 4.037927 AGGGCAATGCTAGACCTAAGTAA 58.962 43.478 4.82 0.00 0.00 2.24
301 302 4.101741 AGGGCAATGCTAGACCTAAGTAAG 59.898 45.833 4.82 0.00 0.00 2.34
315 316 6.849588 CCTAAGTAAGGTTTGTTACGTGTT 57.150 37.500 0.00 0.00 40.94 3.32
316 317 7.250445 CCTAAGTAAGGTTTGTTACGTGTTT 57.750 36.000 0.00 0.00 40.94 2.83
317 318 7.696755 CCTAAGTAAGGTTTGTTACGTGTTTT 58.303 34.615 0.00 0.00 40.94 2.43
318 319 8.825745 CCTAAGTAAGGTTTGTTACGTGTTTTA 58.174 33.333 0.00 0.00 40.94 1.52
319 320 9.636965 CTAAGTAAGGTTTGTTACGTGTTTTAC 57.363 33.333 0.00 0.00 37.87 2.01
338 339 8.563289 GTTTTACGTAAACAACATCATGGAAA 57.437 30.769 19.97 0.00 44.49 3.13
339 340 9.021863 GTTTTACGTAAACAACATCATGGAAAA 57.978 29.630 19.97 0.00 44.49 2.29
340 341 9.582431 TTTTACGTAAACAACATCATGGAAAAA 57.418 25.926 19.97 0.00 0.00 1.94
341 342 8.789881 TTACGTAAACAACATCATGGAAAAAG 57.210 30.769 5.31 0.00 0.00 2.27
342 343 7.033530 ACGTAAACAACATCATGGAAAAAGA 57.966 32.000 0.00 0.00 0.00 2.52
343 344 7.657336 ACGTAAACAACATCATGGAAAAAGAT 58.343 30.769 0.00 0.00 0.00 2.40
344 345 8.141268 ACGTAAACAACATCATGGAAAAAGATT 58.859 29.630 0.00 0.00 0.00 2.40
345 346 9.619316 CGTAAACAACATCATGGAAAAAGATTA 57.381 29.630 0.00 0.00 0.00 1.75
349 350 9.439500 AACAACATCATGGAAAAAGATTATTGG 57.561 29.630 0.00 0.00 0.00 3.16
350 351 8.814931 ACAACATCATGGAAAAAGATTATTGGA 58.185 29.630 0.00 0.00 0.00 3.53
351 352 9.826574 CAACATCATGGAAAAAGATTATTGGAT 57.173 29.630 0.00 0.00 0.00 3.41
353 354 8.355169 ACATCATGGAAAAAGATTATTGGATCG 58.645 33.333 0.00 0.00 0.00 3.69
354 355 7.275888 TCATGGAAAAAGATTATTGGATCGG 57.724 36.000 0.00 0.00 0.00 4.18
355 356 6.833416 TCATGGAAAAAGATTATTGGATCGGT 59.167 34.615 0.00 0.00 0.00 4.69
356 357 7.996066 TCATGGAAAAAGATTATTGGATCGGTA 59.004 33.333 0.00 0.00 0.00 4.02
357 358 8.629158 CATGGAAAAAGATTATTGGATCGGTAA 58.371 33.333 0.00 0.00 0.00 2.85
358 359 8.220755 TGGAAAAAGATTATTGGATCGGTAAG 57.779 34.615 0.00 0.00 0.00 2.34
359 360 7.284489 TGGAAAAAGATTATTGGATCGGTAAGG 59.716 37.037 0.00 0.00 0.00 2.69
360 361 7.255486 GGAAAAAGATTATTGGATCGGTAAGGG 60.255 40.741 0.00 0.00 0.00 3.95
361 362 4.910458 AGATTATTGGATCGGTAAGGGG 57.090 45.455 0.00 0.00 0.00 4.79
362 363 3.587506 AGATTATTGGATCGGTAAGGGGG 59.412 47.826 0.00 0.00 0.00 5.40
363 364 2.799282 TATTGGATCGGTAAGGGGGA 57.201 50.000 0.00 0.00 0.00 4.81
364 365 1.901648 ATTGGATCGGTAAGGGGGAA 58.098 50.000 0.00 0.00 0.00 3.97
365 366 1.209621 TTGGATCGGTAAGGGGGAAG 58.790 55.000 0.00 0.00 0.00 3.46
366 367 0.693092 TGGATCGGTAAGGGGGAAGG 60.693 60.000 0.00 0.00 0.00 3.46
367 368 1.416480 GGATCGGTAAGGGGGAAGGG 61.416 65.000 0.00 0.00 0.00 3.95
368 369 1.385489 ATCGGTAAGGGGGAAGGGG 60.385 63.158 0.00 0.00 0.00 4.79
369 370 1.905141 ATCGGTAAGGGGGAAGGGGA 61.905 60.000 0.00 0.00 0.00 4.81
370 371 2.372890 CGGTAAGGGGGAAGGGGAC 61.373 68.421 0.00 0.00 0.00 4.46
384 385 2.592287 GGACCACCCGCGTCAAAA 60.592 61.111 4.92 0.00 31.55 2.44
385 386 1.969589 GGACCACCCGCGTCAAAAT 60.970 57.895 4.92 0.00 31.55 1.82
386 387 1.500396 GACCACCCGCGTCAAAATC 59.500 57.895 4.92 0.00 0.00 2.17
387 388 1.228003 ACCACCCGCGTCAAAATCA 60.228 52.632 4.92 0.00 0.00 2.57
388 389 1.234615 ACCACCCGCGTCAAAATCAG 61.235 55.000 4.92 0.00 0.00 2.90
389 390 1.154225 CACCCGCGTCAAAATCAGC 60.154 57.895 4.92 0.00 0.00 4.26
393 394 2.485122 GCGTCAAAATCAGCGGGG 59.515 61.111 0.00 0.00 0.00 5.73
394 395 2.485122 CGTCAAAATCAGCGGGGC 59.515 61.111 0.00 0.00 0.00 5.80
395 396 2.331893 CGTCAAAATCAGCGGGGCA 61.332 57.895 0.00 0.00 0.00 5.36
396 397 1.861542 CGTCAAAATCAGCGGGGCAA 61.862 55.000 0.00 0.00 0.00 4.52
397 398 0.109132 GTCAAAATCAGCGGGGCAAG 60.109 55.000 0.00 0.00 0.00 4.01
398 399 0.251121 TCAAAATCAGCGGGGCAAGA 60.251 50.000 0.00 0.00 0.00 3.02
399 400 0.171903 CAAAATCAGCGGGGCAAGAG 59.828 55.000 0.00 0.00 0.00 2.85
400 401 0.967380 AAAATCAGCGGGGCAAGAGG 60.967 55.000 0.00 0.00 0.00 3.69
401 402 4.496336 ATCAGCGGGGCAAGAGGC 62.496 66.667 0.00 0.00 43.74 4.70
403 404 4.729918 CAGCGGGGCAAGAGGCTT 62.730 66.667 0.00 0.00 44.01 4.35
404 405 3.009115 AGCGGGGCAAGAGGCTTA 61.009 61.111 0.00 0.00 44.01 3.09
405 406 2.193248 GCGGGGCAAGAGGCTTAT 59.807 61.111 0.00 0.00 44.01 1.73
406 407 1.054406 AGCGGGGCAAGAGGCTTATA 61.054 55.000 0.00 0.00 44.01 0.98
407 408 0.603975 GCGGGGCAAGAGGCTTATAG 60.604 60.000 0.00 0.00 44.01 1.31
408 409 0.759346 CGGGGCAAGAGGCTTATAGT 59.241 55.000 0.00 0.00 44.01 2.12
409 410 1.141053 CGGGGCAAGAGGCTTATAGTT 59.859 52.381 0.00 0.00 44.01 2.24
410 411 2.421529 CGGGGCAAGAGGCTTATAGTTT 60.422 50.000 0.00 0.00 44.01 2.66
411 412 2.952310 GGGGCAAGAGGCTTATAGTTTG 59.048 50.000 0.00 0.00 44.01 2.93
412 413 3.371595 GGGGCAAGAGGCTTATAGTTTGA 60.372 47.826 0.00 0.00 44.01 2.69
413 414 4.270008 GGGCAAGAGGCTTATAGTTTGAA 58.730 43.478 0.00 0.00 44.01 2.69
414 415 4.705023 GGGCAAGAGGCTTATAGTTTGAAA 59.295 41.667 0.00 0.00 44.01 2.69
415 416 5.185056 GGGCAAGAGGCTTATAGTTTGAAAA 59.815 40.000 0.00 0.00 44.01 2.29
416 417 6.295067 GGGCAAGAGGCTTATAGTTTGAAAAA 60.295 38.462 0.00 0.00 44.01 1.94
417 418 7.323420 GGCAAGAGGCTTATAGTTTGAAAAAT 58.677 34.615 0.00 0.00 44.01 1.82
418 419 7.819415 GGCAAGAGGCTTATAGTTTGAAAAATT 59.181 33.333 0.00 0.00 44.01 1.82
419 420 9.855021 GCAAGAGGCTTATAGTTTGAAAAATTA 57.145 29.630 0.00 0.00 40.25 1.40
422 423 9.227777 AGAGGCTTATAGTTTGAAAAATTACGT 57.772 29.630 0.00 0.00 0.00 3.57
425 426 9.712359 GGCTTATAGTTTGAAAAATTACGTAGG 57.288 33.333 0.00 0.00 0.00 3.18
431 432 7.570161 AGTTTGAAAAATTACGTAGGTCTTCG 58.430 34.615 0.00 0.00 0.00 3.79
432 433 7.225341 AGTTTGAAAAATTACGTAGGTCTTCGT 59.775 33.333 7.69 7.69 42.82 3.85
433 434 8.487176 GTTTGAAAAATTACGTAGGTCTTCGTA 58.513 33.333 5.90 5.90 40.70 3.43
434 435 7.801547 TGAAAAATTACGTAGGTCTTCGTAG 57.198 36.000 9.16 0.00 42.09 3.51
435 436 6.308766 TGAAAAATTACGTAGGTCTTCGTAGC 59.691 38.462 9.16 0.00 42.09 3.58
436 437 3.978718 ATTACGTAGGTCTTCGTAGCC 57.021 47.619 9.16 0.00 42.09 3.93
437 438 2.401583 TACGTAGGTCTTCGTAGCCA 57.598 50.000 5.90 0.00 40.70 4.75
438 439 0.807496 ACGTAGGTCTTCGTAGCCAC 59.193 55.000 0.96 2.24 38.52 5.01
439 440 0.100146 CGTAGGTCTTCGTAGCCACC 59.900 60.000 5.58 0.00 0.00 4.61
440 441 1.472188 GTAGGTCTTCGTAGCCACCT 58.528 55.000 7.45 7.45 42.21 4.00
441 442 1.134560 GTAGGTCTTCGTAGCCACCTG 59.865 57.143 11.33 0.00 39.69 4.00
442 443 0.251653 AGGTCTTCGTAGCCACCTGA 60.252 55.000 2.17 0.00 37.88 3.86
443 444 0.824759 GGTCTTCGTAGCCACCTGAT 59.175 55.000 0.00 0.00 0.00 2.90
444 445 2.029623 GGTCTTCGTAGCCACCTGATA 58.970 52.381 0.00 0.00 0.00 2.15
445 446 2.034812 GGTCTTCGTAGCCACCTGATAG 59.965 54.545 0.00 0.00 0.00 2.08
446 447 2.034812 GTCTTCGTAGCCACCTGATAGG 59.965 54.545 0.00 0.00 42.49 2.57
462 463 6.159299 CTGATAGGTGCAGGATATATCTGG 57.841 45.833 12.42 6.30 33.16 3.86
463 464 4.406972 TGATAGGTGCAGGATATATCTGGC 59.593 45.833 12.42 15.13 33.16 4.85
464 465 1.912043 AGGTGCAGGATATATCTGGCC 59.088 52.381 19.48 0.00 33.16 5.36
465 466 1.630369 GGTGCAGGATATATCTGGCCA 59.370 52.381 19.48 4.71 33.16 5.36
466 467 2.240667 GGTGCAGGATATATCTGGCCAT 59.759 50.000 5.51 0.00 33.16 4.40
467 468 3.539604 GTGCAGGATATATCTGGCCATC 58.460 50.000 5.51 0.00 33.16 3.51
468 469 3.199508 GTGCAGGATATATCTGGCCATCT 59.800 47.826 5.51 0.00 33.16 2.90
469 470 3.199289 TGCAGGATATATCTGGCCATCTG 59.801 47.826 5.51 13.96 33.16 2.90
470 471 3.806380 CAGGATATATCTGGCCATCTGC 58.194 50.000 5.51 0.00 40.16 4.26
495 496 2.124695 GGCCTACCAAAGCCCGAG 60.125 66.667 0.00 0.00 43.76 4.63
496 497 2.124695 GCCTACCAAAGCCCGAGG 60.125 66.667 0.00 0.00 0.00 4.63
528 529 4.111967 CCATCGGGCCTGGTTTTT 57.888 55.556 12.87 0.00 0.00 1.94
529 530 1.591183 CCATCGGGCCTGGTTTTTG 59.409 57.895 12.87 2.29 0.00 2.44
530 531 1.591183 CATCGGGCCTGGTTTTTGG 59.409 57.895 12.87 0.00 0.00 3.28
531 532 1.609210 ATCGGGCCTGGTTTTTGGG 60.609 57.895 12.87 0.00 0.00 4.12
532 533 4.002506 CGGGCCTGGTTTTTGGGC 62.003 66.667 2.57 0.00 46.59 5.36
535 536 4.531351 GCCTGGTTTTTGGGCCTA 57.469 55.556 4.53 0.00 39.96 3.93
536 537 2.753319 GCCTGGTTTTTGGGCCTAA 58.247 52.632 4.53 0.00 39.96 2.69
537 538 0.608130 GCCTGGTTTTTGGGCCTAAG 59.392 55.000 4.53 0.00 39.96 2.18
538 539 0.608130 CCTGGTTTTTGGGCCTAAGC 59.392 55.000 4.53 6.96 38.76 3.09
551 552 2.447443 GCCTAAGCCTAGCCAAAAAGT 58.553 47.619 0.00 0.00 0.00 2.66
552 553 2.164422 GCCTAAGCCTAGCCAAAAAGTG 59.836 50.000 0.00 0.00 0.00 3.16
553 554 3.686016 CCTAAGCCTAGCCAAAAAGTGA 58.314 45.455 0.00 0.00 0.00 3.41
554 555 4.273318 CCTAAGCCTAGCCAAAAAGTGAT 58.727 43.478 0.00 0.00 0.00 3.06
555 556 5.437060 CCTAAGCCTAGCCAAAAAGTGATA 58.563 41.667 0.00 0.00 0.00 2.15
556 557 5.885912 CCTAAGCCTAGCCAAAAAGTGATAA 59.114 40.000 0.00 0.00 0.00 1.75
557 558 6.377146 CCTAAGCCTAGCCAAAAAGTGATAAA 59.623 38.462 0.00 0.00 0.00 1.40
558 559 5.904362 AGCCTAGCCAAAAAGTGATAAAG 57.096 39.130 0.00 0.00 0.00 1.85
559 560 4.158579 AGCCTAGCCAAAAAGTGATAAAGC 59.841 41.667 0.00 0.00 0.00 3.51
560 561 4.678044 GCCTAGCCAAAAAGTGATAAAGCC 60.678 45.833 0.00 0.00 0.00 4.35
561 562 3.961480 AGCCAAAAAGTGATAAAGCCC 57.039 42.857 0.00 0.00 0.00 5.19
562 563 2.231235 AGCCAAAAAGTGATAAAGCCCG 59.769 45.455 0.00 0.00 0.00 6.13
563 564 2.606108 CCAAAAAGTGATAAAGCCCGC 58.394 47.619 0.00 0.00 0.00 6.13
564 565 2.606108 CAAAAAGTGATAAAGCCCGCC 58.394 47.619 0.00 0.00 0.00 6.13
565 566 0.808755 AAAAGTGATAAAGCCCGCCG 59.191 50.000 0.00 0.00 0.00 6.46
566 567 1.029947 AAAGTGATAAAGCCCGCCGG 61.030 55.000 0.00 0.00 0.00 6.13
585 586 3.867549 GCCGAGGCCCTTTAGTAAA 57.132 52.632 0.00 0.00 34.56 2.01
586 587 2.343484 GCCGAGGCCCTTTAGTAAAT 57.657 50.000 0.00 0.00 34.56 1.40
587 588 2.219458 GCCGAGGCCCTTTAGTAAATC 58.781 52.381 0.00 0.00 34.56 2.17
588 589 2.420967 GCCGAGGCCCTTTAGTAAATCA 60.421 50.000 0.00 0.00 34.56 2.57
589 590 3.747708 GCCGAGGCCCTTTAGTAAATCAT 60.748 47.826 0.00 0.00 34.56 2.45
590 591 3.815401 CCGAGGCCCTTTAGTAAATCATG 59.185 47.826 0.00 0.00 0.00 3.07
591 592 4.444306 CCGAGGCCCTTTAGTAAATCATGA 60.444 45.833 0.00 0.00 0.00 3.07
592 593 5.123227 CGAGGCCCTTTAGTAAATCATGAA 58.877 41.667 0.00 0.00 0.00 2.57
593 594 5.588648 CGAGGCCCTTTAGTAAATCATGAAA 59.411 40.000 0.00 0.00 0.00 2.69
594 595 6.094881 CGAGGCCCTTTAGTAAATCATGAAAA 59.905 38.462 0.00 0.00 0.00 2.29
595 596 7.170393 AGGCCCTTTAGTAAATCATGAAAAC 57.830 36.000 0.00 0.00 0.00 2.43
596 597 6.033966 GGCCCTTTAGTAAATCATGAAAACG 58.966 40.000 0.00 0.00 0.00 3.60
597 598 6.127842 GGCCCTTTAGTAAATCATGAAAACGA 60.128 38.462 0.00 0.00 0.00 3.85
598 599 6.745907 GCCCTTTAGTAAATCATGAAAACGAC 59.254 38.462 0.00 0.00 0.00 4.34
599 600 6.959311 CCCTTTAGTAAATCATGAAAACGACG 59.041 38.462 0.00 0.00 0.00 5.12
600 601 6.959311 CCTTTAGTAAATCATGAAAACGACGG 59.041 38.462 0.00 0.00 0.00 4.79
601 602 4.939509 AGTAAATCATGAAAACGACGGG 57.060 40.909 0.00 0.00 0.00 5.28
602 603 2.629639 AAATCATGAAAACGACGGGC 57.370 45.000 0.00 0.00 0.00 6.13
603 604 0.808755 AATCATGAAAACGACGGGCC 59.191 50.000 0.00 0.00 0.00 5.80
604 605 0.035439 ATCATGAAAACGACGGGCCT 60.035 50.000 0.84 0.00 0.00 5.19
605 606 0.953471 TCATGAAAACGACGGGCCTG 60.953 55.000 11.02 11.02 0.00 4.85
606 607 0.953471 CATGAAAACGACGGGCCTGA 60.953 55.000 21.41 0.00 0.00 3.86
607 608 0.673644 ATGAAAACGACGGGCCTGAG 60.674 55.000 21.41 14.39 0.00 3.35
608 609 2.668550 AAAACGACGGGCCTGAGC 60.669 61.111 21.41 8.94 38.76 4.26
619 620 4.785453 CCTGAGCCCAAGCCCGAC 62.785 72.222 0.00 0.00 41.25 4.79
620 621 4.785453 CTGAGCCCAAGCCCGACC 62.785 72.222 0.00 0.00 41.25 4.79
644 645 2.565841 CCTTCGGGCTCAAAATCTAGG 58.434 52.381 0.00 0.00 0.00 3.02
645 646 1.943340 CTTCGGGCTCAAAATCTAGGC 59.057 52.381 0.00 0.00 37.55 3.93
648 649 3.903208 GGCTCAAAATCTAGGCCCA 57.097 52.632 0.00 0.00 37.12 5.36
649 650 1.685148 GGCTCAAAATCTAGGCCCAG 58.315 55.000 0.00 0.00 37.12 4.45
650 651 1.685148 GCTCAAAATCTAGGCCCAGG 58.315 55.000 0.00 0.00 0.00 4.45
651 652 1.685148 CTCAAAATCTAGGCCCAGGC 58.315 55.000 0.00 0.00 41.06 4.85
669 670 4.889112 CAGGCCCGGATGCAGCAT 62.889 66.667 7.91 7.91 0.00 3.79
670 671 4.133373 AGGCCCGGATGCAGCATT 62.133 61.111 9.90 0.00 0.00 3.56
671 672 3.908081 GGCCCGGATGCAGCATTG 61.908 66.667 9.90 5.47 0.00 2.82
672 673 3.908081 GCCCGGATGCAGCATTGG 61.908 66.667 9.90 14.31 0.00 3.16
673 674 3.221389 CCCGGATGCAGCATTGGG 61.221 66.667 24.75 24.75 34.92 4.12
674 675 2.440796 CCGGATGCAGCATTGGGT 60.441 61.111 9.90 0.00 0.00 4.51
675 676 2.484062 CCGGATGCAGCATTGGGTC 61.484 63.158 9.90 0.00 0.00 4.46
676 677 2.827051 CGGATGCAGCATTGGGTCG 61.827 63.158 9.90 5.61 0.00 4.79
677 678 2.484062 GGATGCAGCATTGGGTCGG 61.484 63.158 9.90 0.00 0.00 4.79
678 679 2.440796 ATGCAGCATTGGGTCGGG 60.441 61.111 0.52 0.00 0.00 5.14
681 682 2.361610 CAGCATTGGGTCGGGCTT 60.362 61.111 0.00 0.00 33.60 4.35
682 683 1.978617 CAGCATTGGGTCGGGCTTT 60.979 57.895 0.00 0.00 33.60 3.51
683 684 1.228862 AGCATTGGGTCGGGCTTTT 60.229 52.632 0.00 0.00 31.34 2.27
684 685 0.831711 AGCATTGGGTCGGGCTTTTT 60.832 50.000 0.00 0.00 31.34 1.94
685 686 0.389817 GCATTGGGTCGGGCTTTTTC 60.390 55.000 0.00 0.00 0.00 2.29
686 687 0.109319 CATTGGGTCGGGCTTTTTCG 60.109 55.000 0.00 0.00 0.00 3.46
687 688 1.248101 ATTGGGTCGGGCTTTTTCGG 61.248 55.000 0.00 0.00 0.00 4.30
688 689 3.060000 GGGTCGGGCTTTTTCGGG 61.060 66.667 0.00 0.00 0.00 5.14
689 690 3.744719 GGTCGGGCTTTTTCGGGC 61.745 66.667 0.00 0.00 0.00 6.13
690 691 3.744719 GTCGGGCTTTTTCGGGCC 61.745 66.667 0.00 0.00 46.89 5.80
694 695 2.257371 GGCTTTTTCGGGCCGTTC 59.743 61.111 27.32 9.28 38.91 3.95
695 696 2.127003 GCTTTTTCGGGCCGTTCG 60.127 61.111 27.32 11.95 0.00 3.95
696 697 2.559330 CTTTTTCGGGCCGTTCGG 59.441 61.111 27.32 9.83 0.00 4.30
697 698 2.973316 CTTTTTCGGGCCGTTCGGG 61.973 63.158 27.32 10.92 39.58 5.14
722 723 2.423446 GCCCATGGCGAGGACTAG 59.577 66.667 6.09 0.00 39.62 2.57
723 724 2.435693 GCCCATGGCGAGGACTAGT 61.436 63.158 6.09 0.00 39.62 2.57
724 725 1.443407 CCCATGGCGAGGACTAGTG 59.557 63.158 6.09 0.00 0.00 2.74
725 726 1.330655 CCCATGGCGAGGACTAGTGT 61.331 60.000 6.09 0.00 0.00 3.55
726 727 1.399714 CCATGGCGAGGACTAGTGTA 58.600 55.000 0.00 0.00 0.00 2.90
727 728 1.338337 CCATGGCGAGGACTAGTGTAG 59.662 57.143 0.00 0.00 0.00 2.74
728 729 1.338337 CATGGCGAGGACTAGTGTAGG 59.662 57.143 0.00 0.00 0.00 3.18
729 730 0.622136 TGGCGAGGACTAGTGTAGGA 59.378 55.000 0.00 0.00 0.00 2.94
730 731 1.214673 TGGCGAGGACTAGTGTAGGAT 59.785 52.381 0.00 0.00 0.00 3.24
731 732 2.308690 GGCGAGGACTAGTGTAGGATT 58.691 52.381 0.00 0.00 0.00 3.01
732 733 3.117776 TGGCGAGGACTAGTGTAGGATTA 60.118 47.826 0.00 0.00 0.00 1.75
733 734 4.080687 GGCGAGGACTAGTGTAGGATTAT 58.919 47.826 0.00 0.00 0.00 1.28
734 735 4.156373 GGCGAGGACTAGTGTAGGATTATC 59.844 50.000 0.00 0.00 0.00 1.75
735 736 5.005094 GCGAGGACTAGTGTAGGATTATCT 58.995 45.833 0.00 0.00 0.00 1.98
736 737 5.122711 GCGAGGACTAGTGTAGGATTATCTC 59.877 48.000 0.00 0.00 0.00 2.75
737 738 5.644636 CGAGGACTAGTGTAGGATTATCTCC 59.355 48.000 0.00 0.00 45.33 3.71
738 739 5.894653 AGGACTAGTGTAGGATTATCTCCC 58.105 45.833 0.00 0.00 46.27 4.30
739 740 5.617851 AGGACTAGTGTAGGATTATCTCCCT 59.382 44.000 0.00 0.00 46.27 4.20
740 741 6.104990 AGGACTAGTGTAGGATTATCTCCCTT 59.895 42.308 0.00 0.00 46.27 3.95
741 742 6.209788 GGACTAGTGTAGGATTATCTCCCTTG 59.790 46.154 0.00 0.00 46.27 3.61
742 743 6.923670 ACTAGTGTAGGATTATCTCCCTTGA 58.076 40.000 0.00 0.00 46.27 3.02
743 744 7.007723 ACTAGTGTAGGATTATCTCCCTTGAG 58.992 42.308 0.00 0.00 46.27 3.02
757 758 1.771255 CCTTGAGATTCAGGGGTAGGG 59.229 57.143 0.00 0.00 39.69 3.53
758 759 2.629639 CCTTGAGATTCAGGGGTAGGGA 60.630 54.545 0.00 0.00 39.69 4.20
759 760 2.478872 TGAGATTCAGGGGTAGGGAG 57.521 55.000 0.00 0.00 0.00 4.30
760 761 1.937350 TGAGATTCAGGGGTAGGGAGA 59.063 52.381 0.00 0.00 0.00 3.71
761 762 2.091055 TGAGATTCAGGGGTAGGGAGAG 60.091 54.545 0.00 0.00 0.00 3.20
762 763 2.178106 GAGATTCAGGGGTAGGGAGAGA 59.822 54.545 0.00 0.00 0.00 3.10
763 764 2.800788 AGATTCAGGGGTAGGGAGAGAT 59.199 50.000 0.00 0.00 0.00 2.75
764 765 3.211000 AGATTCAGGGGTAGGGAGAGATT 59.789 47.826 0.00 0.00 0.00 2.40
765 766 2.777459 TCAGGGGTAGGGAGAGATTC 57.223 55.000 0.00 0.00 0.00 2.52
766 767 1.133450 TCAGGGGTAGGGAGAGATTCG 60.133 57.143 0.00 0.00 0.00 3.34
767 768 0.935194 AGGGGTAGGGAGAGATTCGT 59.065 55.000 0.00 0.00 0.00 3.85
768 769 2.141911 AGGGGTAGGGAGAGATTCGTA 58.858 52.381 0.00 0.00 0.00 3.43
769 770 2.108601 AGGGGTAGGGAGAGATTCGTAG 59.891 54.545 0.00 0.00 0.00 3.51
770 771 2.516906 GGGTAGGGAGAGATTCGTAGG 58.483 57.143 0.00 0.00 0.00 3.18
771 772 2.158490 GGGTAGGGAGAGATTCGTAGGT 60.158 54.545 0.00 0.00 0.00 3.08
772 773 2.885894 GGTAGGGAGAGATTCGTAGGTG 59.114 54.545 0.00 0.00 0.00 4.00
773 774 2.830651 AGGGAGAGATTCGTAGGTGT 57.169 50.000 0.00 0.00 0.00 4.16
774 775 3.947612 AGGGAGAGATTCGTAGGTGTA 57.052 47.619 0.00 0.00 0.00 2.90
775 776 3.822940 AGGGAGAGATTCGTAGGTGTAG 58.177 50.000 0.00 0.00 0.00 2.74
776 777 2.885894 GGGAGAGATTCGTAGGTGTAGG 59.114 54.545 0.00 0.00 0.00 3.18
777 778 3.553904 GGAGAGATTCGTAGGTGTAGGT 58.446 50.000 0.00 0.00 0.00 3.08
778 779 3.315749 GGAGAGATTCGTAGGTGTAGGTG 59.684 52.174 0.00 0.00 0.00 4.00
779 780 3.946558 GAGAGATTCGTAGGTGTAGGTGT 59.053 47.826 0.00 0.00 0.00 4.16
780 781 5.108187 AGAGATTCGTAGGTGTAGGTGTA 57.892 43.478 0.00 0.00 0.00 2.90
781 782 5.692928 AGAGATTCGTAGGTGTAGGTGTAT 58.307 41.667 0.00 0.00 0.00 2.29
782 783 5.531659 AGAGATTCGTAGGTGTAGGTGTATG 59.468 44.000 0.00 0.00 0.00 2.39
783 784 5.443283 AGATTCGTAGGTGTAGGTGTATGA 58.557 41.667 0.00 0.00 0.00 2.15
784 785 6.069331 AGATTCGTAGGTGTAGGTGTATGAT 58.931 40.000 0.00 0.00 0.00 2.45
785 786 6.550108 AGATTCGTAGGTGTAGGTGTATGATT 59.450 38.462 0.00 0.00 0.00 2.57
786 787 7.722728 AGATTCGTAGGTGTAGGTGTATGATTA 59.277 37.037 0.00 0.00 0.00 1.75
787 788 7.828508 TTCGTAGGTGTAGGTGTATGATTAT 57.171 36.000 0.00 0.00 0.00 1.28
788 789 8.922931 TTCGTAGGTGTAGGTGTATGATTATA 57.077 34.615 0.00 0.00 0.00 0.98
789 790 8.557592 TCGTAGGTGTAGGTGTATGATTATAG 57.442 38.462 0.00 0.00 0.00 1.31
790 791 8.159447 TCGTAGGTGTAGGTGTATGATTATAGT 58.841 37.037 0.00 0.00 0.00 2.12
791 792 8.790718 CGTAGGTGTAGGTGTATGATTATAGTT 58.209 37.037 0.00 0.00 0.00 2.24
794 795 7.931948 AGGTGTAGGTGTATGATTATAGTTTGC 59.068 37.037 0.00 0.00 0.00 3.68
795 796 7.713507 GGTGTAGGTGTATGATTATAGTTTGCA 59.286 37.037 0.00 0.00 0.00 4.08
796 797 9.273016 GTGTAGGTGTATGATTATAGTTTGCAT 57.727 33.333 0.00 0.00 0.00 3.96
822 823 2.866028 GCAGGCAGCAGTCTTTCG 59.134 61.111 0.00 0.00 44.79 3.46
823 824 1.963338 GCAGGCAGCAGTCTTTCGT 60.963 57.895 0.00 0.00 44.79 3.85
824 825 1.510480 GCAGGCAGCAGTCTTTCGTT 61.510 55.000 0.00 0.00 44.79 3.85
828 829 3.003275 CAGGCAGCAGTCTTTCGTTTTTA 59.997 43.478 0.00 0.00 0.00 1.52
830 831 3.555518 GCAGCAGTCTTTCGTTTTTAGG 58.444 45.455 0.00 0.00 0.00 2.69
869 870 1.136336 GTCGTCCAGTGCATCGTTTTC 60.136 52.381 0.00 0.00 0.00 2.29
871 872 0.521735 GTCCAGTGCATCGTTTTCCC 59.478 55.000 0.00 0.00 0.00 3.97
872 873 0.400213 TCCAGTGCATCGTTTTCCCT 59.600 50.000 0.00 0.00 0.00 4.20
873 874 1.202879 TCCAGTGCATCGTTTTCCCTT 60.203 47.619 0.00 0.00 0.00 3.95
874 875 1.613437 CCAGTGCATCGTTTTCCCTTT 59.387 47.619 0.00 0.00 0.00 3.11
875 876 2.035832 CCAGTGCATCGTTTTCCCTTTT 59.964 45.455 0.00 0.00 0.00 2.27
876 877 3.492482 CCAGTGCATCGTTTTCCCTTTTT 60.492 43.478 0.00 0.00 0.00 1.94
877 878 3.735746 CAGTGCATCGTTTTCCCTTTTTC 59.264 43.478 0.00 0.00 0.00 2.29
878 879 3.636764 AGTGCATCGTTTTCCCTTTTTCT 59.363 39.130 0.00 0.00 0.00 2.52
879 880 4.099419 AGTGCATCGTTTTCCCTTTTTCTT 59.901 37.500 0.00 0.00 0.00 2.52
880 881 4.808895 GTGCATCGTTTTCCCTTTTTCTTT 59.191 37.500 0.00 0.00 0.00 2.52
881 882 5.293324 GTGCATCGTTTTCCCTTTTTCTTTT 59.707 36.000 0.00 0.00 0.00 2.27
882 883 5.877564 TGCATCGTTTTCCCTTTTTCTTTTT 59.122 32.000 0.00 0.00 0.00 1.94
888 889 8.305317 TCGTTTTCCCTTTTTCTTTTTGACTAA 58.695 29.630 0.00 0.00 0.00 2.24
927 942 1.404315 GCCGAGGAGTTCAAGTTCGAT 60.404 52.381 0.00 0.00 33.38 3.59
984 1013 3.683937 CCAAGTGCCAAAGCGGGG 61.684 66.667 0.00 0.00 44.31 5.73
1025 1057 3.371097 TTCCAGCGATCTCGTGGCC 62.371 63.158 0.00 0.00 42.22 5.36
1508 2912 5.011329 TCAACACCAAATCCTTCTACTACGT 59.989 40.000 0.00 0.00 0.00 3.57
1527 2931 2.104859 CCACCTGCACGATGAGCTG 61.105 63.158 0.00 0.00 0.00 4.24
1607 3011 4.154347 GGCCACAGCGGAGGAGAG 62.154 72.222 4.19 0.00 41.24 3.20
1710 3114 1.008538 CCTGCAAAACTCGGTGCAC 60.009 57.895 8.80 8.80 45.52 4.57
1811 3215 0.250467 TTTGAGGTCTCCACTGCAGC 60.250 55.000 15.27 0.00 0.00 5.25
1867 3271 8.896320 ATCTTGATCAATCATTCTCTCTCTTG 57.104 34.615 8.96 0.00 36.56 3.02
1870 3274 7.421087 TGATCAATCATTCTCTCTCTTGAGT 57.579 36.000 0.00 0.00 40.98 3.41
1893 3297 3.664107 TCCAATTTCTTCTCACGGACAG 58.336 45.455 0.00 0.00 0.00 3.51
1912 3329 6.347725 CGGACAGAAATAGGCTGCATATTTAC 60.348 42.308 26.28 19.93 36.86 2.01
1962 3386 3.793797 AGTCAAGGTTTTGTTTTCCGG 57.206 42.857 0.00 0.00 35.73 5.14
2066 3490 4.074970 GTGGAGAAAGAAGGATGAAGCAA 58.925 43.478 0.00 0.00 0.00 3.91
2075 3499 2.165167 AGGATGAAGCAACCACATGTG 58.835 47.619 19.31 19.31 0.00 3.21
2107 3531 4.998788 TCGTCCACTGATTGTCTAATCTG 58.001 43.478 0.00 0.00 42.56 2.90
2181 3606 8.810652 TGTTCCAATTAAGTTTCTTATTGCAC 57.189 30.769 0.00 0.00 0.00 4.57
2185 3610 7.870445 TCCAATTAAGTTTCTTATTGCACCAAC 59.130 33.333 0.00 0.00 0.00 3.77
2199 3624 2.494918 CAACTAGGAGCCGGGTCG 59.505 66.667 26.31 15.70 0.00 4.79
2200 3625 3.459063 AACTAGGAGCCGGGTCGC 61.459 66.667 26.31 18.86 0.00 5.19
2233 3662 6.716284 TGTTACATCTTTACATGGATGGACA 58.284 36.000 12.47 12.54 42.34 4.02
2239 3668 6.757897 TCTTTACATGGATGGACACAAATC 57.242 37.500 0.00 0.00 0.00 2.17
2240 3669 6.244654 TCTTTACATGGATGGACACAAATCA 58.755 36.000 0.00 0.00 0.00 2.57
2247 3676 6.698008 TGGATGGACACAAATCATATTCAC 57.302 37.500 0.00 0.00 0.00 3.18
2253 3682 4.985413 ACACAAATCATATTCACCGCTTG 58.015 39.130 0.00 0.00 0.00 4.01
2256 3685 4.096382 ACAAATCATATTCACCGCTTGACC 59.904 41.667 0.00 0.00 32.26 4.02
2257 3686 3.845781 ATCATATTCACCGCTTGACCT 57.154 42.857 0.00 0.00 32.26 3.85
2258 3687 2.905075 TCATATTCACCGCTTGACCTG 58.095 47.619 0.00 0.00 32.26 4.00
2260 3689 0.392461 TATTCACCGCTTGACCTGCC 60.392 55.000 0.00 0.00 32.26 4.85
2261 3690 2.410322 ATTCACCGCTTGACCTGCCA 62.410 55.000 0.00 0.00 32.26 4.92
2313 3742 0.468771 CCCCTTTCATCATGGGCTCC 60.469 60.000 0.00 0.00 38.40 4.70
2320 3749 0.179009 CATCATGGGCTCCGTCCATT 60.179 55.000 0.00 0.00 46.95 3.16
2357 3786 2.725699 CGCATGAGTACGCAACGCA 61.726 57.895 19.33 0.00 42.42 5.24
2358 3787 1.225745 GCATGAGTACGCAACGCAC 60.226 57.895 16.09 0.00 40.94 5.34
2366 3795 4.605967 CGCAACGCACGCCAGTTT 62.606 61.111 0.00 0.00 0.00 2.66
2397 3826 1.003349 TGCTGGCCCATTTTGATTTGG 59.997 47.619 0.00 0.00 0.00 3.28
2422 3851 2.847901 CTTCAAGATGCTTGCAGTTCG 58.152 47.619 0.87 0.00 0.00 3.95
2424 3853 1.159285 CAAGATGCTTGCAGTTCGGA 58.841 50.000 0.87 0.00 0.00 4.55
2426 3855 2.119801 AGATGCTTGCAGTTCGGATT 57.880 45.000 0.87 0.00 0.00 3.01
2427 3856 2.440409 AGATGCTTGCAGTTCGGATTT 58.560 42.857 0.87 0.00 0.00 2.17
2429 3858 1.896220 TGCTTGCAGTTCGGATTTCT 58.104 45.000 0.00 0.00 0.00 2.52
2430 3859 2.229792 TGCTTGCAGTTCGGATTTCTT 58.770 42.857 0.00 0.00 0.00 2.52
2495 3926 5.604758 TCCCAACATTTTTCACACATTCA 57.395 34.783 0.00 0.00 0.00 2.57
2535 3966 7.993821 TTATGAATGTTTTTCAAAAGCGTGA 57.006 28.000 0.00 0.00 31.55 4.35
2540 3971 6.753897 ATGTTTTTCAAAAGCGTGATCTTC 57.246 33.333 0.00 0.00 0.00 2.87
2636 4069 7.025485 ACATTTTCAAATCCGCAACATTTTT 57.975 28.000 0.00 0.00 0.00 1.94
2638 4071 4.963237 TTCAAATCCGCAACATTTTTCG 57.037 36.364 0.00 0.00 0.00 3.46
2647 4080 3.658533 CGCAACATTTTTCGCCAAATTTG 59.341 39.130 11.40 11.40 0.00 2.32
2648 4081 3.421560 GCAACATTTTTCGCCAAATTTGC 59.578 39.130 12.92 7.50 35.49 3.68
2830 4265 5.199024 TCCACAAGTCAACAATCAAATGG 57.801 39.130 0.00 0.00 0.00 3.16
2842 4277 3.915437 ATCAAATGGTGAACGGTCAAC 57.085 42.857 12.79 12.79 42.31 3.18
2847 4282 1.600023 TGGTGAACGGTCAACCAATC 58.400 50.000 17.54 0.00 41.16 2.67
2850 4285 1.535462 GTGAACGGTCAACCAATCCAG 59.465 52.381 3.77 0.00 34.87 3.86
2855 4290 1.338674 CGGTCAACCAATCCAGCAGTA 60.339 52.381 0.00 0.00 35.14 2.74
2858 4293 3.763897 GGTCAACCAATCCAGCAGTAAAT 59.236 43.478 0.00 0.00 35.64 1.40
2866 4301 2.695359 TCCAGCAGTAAATCGGTCAAC 58.305 47.619 0.00 0.00 0.00 3.18
2867 4302 1.737793 CCAGCAGTAAATCGGTCAACC 59.262 52.381 0.00 0.00 0.00 3.77
2873 4308 2.635915 AGTAAATCGGTCAACCTGTCCA 59.364 45.455 0.00 0.00 0.00 4.02
2874 4309 2.879103 AAATCGGTCAACCTGTCCAT 57.121 45.000 0.00 0.00 0.00 3.41
2875 4310 3.992943 AAATCGGTCAACCTGTCCATA 57.007 42.857 0.00 0.00 0.00 2.74
2876 4311 4.503714 AAATCGGTCAACCTGTCCATAT 57.496 40.909 0.00 0.00 0.00 1.78
2877 4312 2.979814 TCGGTCAACCTGTCCATATG 57.020 50.000 0.00 0.00 0.00 1.78
2878 4313 2.184533 TCGGTCAACCTGTCCATATGT 58.815 47.619 1.24 0.00 0.00 2.29
2879 4314 2.167693 TCGGTCAACCTGTCCATATGTC 59.832 50.000 1.24 0.00 0.00 3.06
2880 4315 2.550978 GGTCAACCTGTCCATATGTCG 58.449 52.381 1.24 0.00 0.00 4.35
2881 4316 2.167693 GGTCAACCTGTCCATATGTCGA 59.832 50.000 1.24 0.00 0.00 4.20
2884 4319 1.120530 ACCTGTCCATATGTCGACCC 58.879 55.000 14.12 0.00 0.00 4.46
2885 4320 0.032130 CCTGTCCATATGTCGACCCG 59.968 60.000 14.12 0.00 0.00 5.28
2886 4321 0.744874 CTGTCCATATGTCGACCCGT 59.255 55.000 14.12 1.59 0.00 5.28
2887 4322 0.742505 TGTCCATATGTCGACCCGTC 59.257 55.000 14.12 0.00 0.00 4.79
2906 4341 1.913762 AGCGGCCCACTAGTCAACT 60.914 57.895 0.00 0.00 0.00 3.16
2907 4342 0.613853 AGCGGCCCACTAGTCAACTA 60.614 55.000 0.00 0.00 0.00 2.24
2927 4362 4.504596 CATAGCTTGGCCGGCCCA 62.505 66.667 41.75 31.27 43.51 5.36
2928 4363 4.195334 ATAGCTTGGCCGGCCCAG 62.195 66.667 41.75 38.86 46.39 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.299297 CGTAGGGGTGATCCTAATGGAC 59.701 54.545 0.00 0.00 46.51 4.02
2 3 1.002087 GCGTAGGGGTGATCCTAATGG 59.998 57.143 0.00 0.00 40.71 3.16
3 4 1.691976 TGCGTAGGGGTGATCCTAATG 59.308 52.381 0.00 0.00 40.71 1.90
4 5 2.097110 TGCGTAGGGGTGATCCTAAT 57.903 50.000 0.00 0.00 40.71 1.73
5 6 1.868713 TTGCGTAGGGGTGATCCTAA 58.131 50.000 0.00 0.00 40.71 2.69
6 7 1.868713 TTTGCGTAGGGGTGATCCTA 58.131 50.000 0.00 0.00 38.30 2.94
7 8 0.988832 TTTTGCGTAGGGGTGATCCT 59.011 50.000 0.00 0.00 40.79 3.24
8 9 1.379527 CTTTTGCGTAGGGGTGATCC 58.620 55.000 0.00 0.00 0.00 3.36
9 10 0.733150 GCTTTTGCGTAGGGGTGATC 59.267 55.000 0.00 0.00 34.86 2.92
10 11 2.868253 GCTTTTGCGTAGGGGTGAT 58.132 52.632 0.00 0.00 34.86 3.06
11 12 4.390048 GCTTTTGCGTAGGGGTGA 57.610 55.556 0.00 0.00 34.86 4.02
27 28 1.499502 GAGCGTCAAAAGCCAGAGC 59.500 57.895 0.00 0.00 40.32 4.09
28 29 0.946221 ACGAGCGTCAAAAGCCAGAG 60.946 55.000 0.00 0.00 34.64 3.35
29 30 1.069090 ACGAGCGTCAAAAGCCAGA 59.931 52.632 0.00 0.00 34.64 3.86
30 31 1.205064 CACGAGCGTCAAAAGCCAG 59.795 57.895 0.00 0.00 34.64 4.85
31 32 2.250939 CCACGAGCGTCAAAAGCCA 61.251 57.895 0.00 0.00 34.64 4.75
32 33 2.556287 CCACGAGCGTCAAAAGCC 59.444 61.111 0.00 0.00 34.64 4.35
33 34 2.556287 CCCACGAGCGTCAAAAGC 59.444 61.111 0.00 0.00 0.00 3.51
34 35 1.577328 ATGCCCACGAGCGTCAAAAG 61.577 55.000 0.00 0.00 34.65 2.27
35 36 1.573829 GATGCCCACGAGCGTCAAAA 61.574 55.000 12.11 0.00 46.12 2.44
36 37 2.031919 ATGCCCACGAGCGTCAAA 59.968 55.556 0.00 0.00 34.65 2.69
37 38 2.434185 GATGCCCACGAGCGTCAA 60.434 61.111 12.11 0.00 46.12 3.18
39 40 2.679132 ATACGATGCCCACGAGCGTC 62.679 60.000 0.00 8.39 43.90 5.19
40 41 1.449726 TATACGATGCCCACGAGCGT 61.450 55.000 0.00 0.00 38.81 5.07
41 42 0.729478 CTATACGATGCCCACGAGCG 60.729 60.000 0.00 0.00 34.65 5.03
42 43 0.388649 CCTATACGATGCCCACGAGC 60.389 60.000 0.00 0.00 34.70 5.03
43 44 0.243907 CCCTATACGATGCCCACGAG 59.756 60.000 0.00 0.00 34.70 4.18
44 45 0.178984 TCCCTATACGATGCCCACGA 60.179 55.000 0.00 0.00 34.70 4.35
45 46 0.243907 CTCCCTATACGATGCCCACG 59.756 60.000 0.00 0.00 0.00 4.94
46 47 1.339097 ACTCCCTATACGATGCCCAC 58.661 55.000 0.00 0.00 0.00 4.61
47 48 2.097110 AACTCCCTATACGATGCCCA 57.903 50.000 0.00 0.00 0.00 5.36
48 49 2.609737 CGAAACTCCCTATACGATGCCC 60.610 54.545 0.00 0.00 0.00 5.36
49 50 2.609737 CCGAAACTCCCTATACGATGCC 60.610 54.545 0.00 0.00 0.00 4.40
50 51 2.673833 CCGAAACTCCCTATACGATGC 58.326 52.381 0.00 0.00 0.00 3.91
51 52 2.609737 GGCCGAAACTCCCTATACGATG 60.610 54.545 0.00 0.00 0.00 3.84
52 53 1.617357 GGCCGAAACTCCCTATACGAT 59.383 52.381 0.00 0.00 0.00 3.73
53 54 1.035139 GGCCGAAACTCCCTATACGA 58.965 55.000 0.00 0.00 0.00 3.43
54 55 0.318445 CGGCCGAAACTCCCTATACG 60.318 60.000 24.07 0.00 0.00 3.06
55 56 1.000496 CTCGGCCGAAACTCCCTATAC 60.000 57.143 30.53 0.00 0.00 1.47
56 57 1.325355 CTCGGCCGAAACTCCCTATA 58.675 55.000 30.53 1.31 0.00 1.31
57 58 2.029307 GCTCGGCCGAAACTCCCTAT 62.029 60.000 30.53 0.00 0.00 2.57
58 59 2.718073 GCTCGGCCGAAACTCCCTA 61.718 63.158 30.53 2.79 0.00 3.53
59 60 4.083862 GCTCGGCCGAAACTCCCT 62.084 66.667 30.53 0.00 0.00 4.20
60 61 3.607370 AAGCTCGGCCGAAACTCCC 62.607 63.158 30.53 12.72 0.00 4.30
61 62 1.671379 AAAGCTCGGCCGAAACTCC 60.671 57.895 30.53 14.50 0.00 3.85
62 63 1.497722 CAAAGCTCGGCCGAAACTC 59.502 57.895 30.53 17.63 0.00 3.01
63 64 2.617274 GCAAAGCTCGGCCGAAACT 61.617 57.895 30.53 25.44 0.00 2.66
64 65 1.296056 TAGCAAAGCTCGGCCGAAAC 61.296 55.000 30.53 23.53 40.44 2.78
65 66 1.004320 TAGCAAAGCTCGGCCGAAA 60.004 52.632 30.53 8.03 40.44 3.46
66 67 1.740296 GTAGCAAAGCTCGGCCGAA 60.740 57.895 30.53 13.22 40.44 4.30
67 68 2.125673 GTAGCAAAGCTCGGCCGA 60.126 61.111 29.03 29.03 40.44 5.54
68 69 1.766143 GATGTAGCAAAGCTCGGCCG 61.766 60.000 22.12 22.12 40.44 6.13
69 70 0.462759 AGATGTAGCAAAGCTCGGCC 60.463 55.000 5.99 0.00 40.44 6.13
70 71 1.861575 GTAGATGTAGCAAAGCTCGGC 59.138 52.381 0.00 1.50 40.44 5.54
71 72 2.120232 CGTAGATGTAGCAAAGCTCGG 58.880 52.381 0.00 0.00 40.44 4.63
72 73 2.798680 ACGTAGATGTAGCAAAGCTCG 58.201 47.619 0.00 0.00 40.44 5.03
73 74 6.237861 CCTTTTACGTAGATGTAGCAAAGCTC 60.238 42.308 0.00 0.00 40.44 4.09
74 75 5.581085 CCTTTTACGTAGATGTAGCAAAGCT 59.419 40.000 0.00 0.00 43.41 3.74
75 76 5.350640 ACCTTTTACGTAGATGTAGCAAAGC 59.649 40.000 0.00 0.00 0.00 3.51
76 77 6.367969 ACACCTTTTACGTAGATGTAGCAAAG 59.632 38.462 0.00 0.51 0.00 2.77
77 78 6.225318 ACACCTTTTACGTAGATGTAGCAAA 58.775 36.000 0.00 0.00 0.00 3.68
78 79 5.786311 ACACCTTTTACGTAGATGTAGCAA 58.214 37.500 0.00 0.00 0.00 3.91
79 80 5.395682 ACACCTTTTACGTAGATGTAGCA 57.604 39.130 0.00 0.00 0.00 3.49
80 81 6.021153 CGTAACACCTTTTACGTAGATGTAGC 60.021 42.308 7.15 0.00 46.00 3.58
81 82 7.428562 CGTAACACCTTTTACGTAGATGTAG 57.571 40.000 7.15 0.00 46.00 2.74
91 92 7.264034 CGACGTAAATTTCGTAACACCTTTTAC 59.736 37.037 13.21 0.00 41.64 2.01
92 93 7.168302 TCGACGTAAATTTCGTAACACCTTTTA 59.832 33.333 13.21 0.00 41.64 1.52
93 94 6.019156 TCGACGTAAATTTCGTAACACCTTTT 60.019 34.615 13.21 0.00 41.64 2.27
94 95 5.461737 TCGACGTAAATTTCGTAACACCTTT 59.538 36.000 13.21 0.00 41.64 3.11
95 96 4.981674 TCGACGTAAATTTCGTAACACCTT 59.018 37.500 13.21 0.00 41.64 3.50
96 97 4.545610 TCGACGTAAATTTCGTAACACCT 58.454 39.130 13.21 0.00 41.64 4.00
97 98 4.719276 GCTCGACGTAAATTTCGTAACACC 60.719 45.833 13.21 3.56 41.64 4.16
98 99 4.089065 AGCTCGACGTAAATTTCGTAACAC 59.911 41.667 13.21 6.63 41.64 3.32
99 100 4.229096 AGCTCGACGTAAATTTCGTAACA 58.771 39.130 13.21 3.41 41.64 2.41
100 101 4.812862 AGCTCGACGTAAATTTCGTAAC 57.187 40.909 13.21 0.00 41.64 2.50
101 102 6.527722 ACATAAGCTCGACGTAAATTTCGTAA 59.472 34.615 13.21 6.61 41.64 3.18
102 103 6.021232 CACATAAGCTCGACGTAAATTTCGTA 60.021 38.462 13.21 2.26 41.64 3.43
103 104 4.860907 ACATAAGCTCGACGTAAATTTCGT 59.139 37.500 13.14 13.14 44.27 3.85
104 105 5.181084 CACATAAGCTCGACGTAAATTTCG 58.819 41.667 0.00 1.16 36.55 3.46
105 106 5.490213 CCACATAAGCTCGACGTAAATTTC 58.510 41.667 0.00 0.00 0.00 2.17
106 107 4.201783 GCCACATAAGCTCGACGTAAATTT 60.202 41.667 0.00 0.00 0.00 1.82
107 108 3.308866 GCCACATAAGCTCGACGTAAATT 59.691 43.478 0.00 0.00 0.00 1.82
108 109 2.864343 GCCACATAAGCTCGACGTAAAT 59.136 45.455 0.00 0.00 0.00 1.40
109 110 2.264813 GCCACATAAGCTCGACGTAAA 58.735 47.619 0.00 0.00 0.00 2.01
110 111 1.470285 GGCCACATAAGCTCGACGTAA 60.470 52.381 0.00 0.00 0.00 3.18
111 112 0.101759 GGCCACATAAGCTCGACGTA 59.898 55.000 0.00 0.00 0.00 3.57
112 113 1.153628 GGCCACATAAGCTCGACGT 60.154 57.895 0.00 0.00 0.00 4.34
113 114 0.384309 TAGGCCACATAAGCTCGACG 59.616 55.000 5.01 0.00 0.00 5.12
114 115 2.596904 TTAGGCCACATAAGCTCGAC 57.403 50.000 5.01 0.00 0.00 4.20
115 116 3.838244 AATTAGGCCACATAAGCTCGA 57.162 42.857 5.01 0.00 0.00 4.04
116 117 3.003689 CCAAATTAGGCCACATAAGCTCG 59.996 47.826 5.01 0.00 0.00 5.03
117 118 3.954258 ACCAAATTAGGCCACATAAGCTC 59.046 43.478 5.01 0.00 0.00 4.09
118 119 3.981212 ACCAAATTAGGCCACATAAGCT 58.019 40.909 5.01 0.00 0.00 3.74
119 120 4.432712 CAACCAAATTAGGCCACATAAGC 58.567 43.478 5.01 0.00 0.00 3.09
120 121 4.709397 TCCAACCAAATTAGGCCACATAAG 59.291 41.667 5.01 0.00 0.00 1.73
121 122 4.678256 TCCAACCAAATTAGGCCACATAA 58.322 39.130 5.01 0.00 0.00 1.90
122 123 4.323569 TCCAACCAAATTAGGCCACATA 57.676 40.909 5.01 0.00 0.00 2.29
123 124 3.182887 TCCAACCAAATTAGGCCACAT 57.817 42.857 5.01 0.00 0.00 3.21
124 125 2.685106 TCCAACCAAATTAGGCCACA 57.315 45.000 5.01 0.00 0.00 4.17
125 126 2.897326 ACTTCCAACCAAATTAGGCCAC 59.103 45.455 5.01 0.00 0.00 5.01
126 127 3.252554 ACTTCCAACCAAATTAGGCCA 57.747 42.857 5.01 0.00 0.00 5.36
127 128 5.731957 TTTACTTCCAACCAAATTAGGCC 57.268 39.130 0.00 0.00 0.00 5.19
150 151 1.632589 GGGTGAGCATGGGTCTTTTT 58.367 50.000 0.00 0.00 0.00 1.94
151 152 0.251787 GGGGTGAGCATGGGTCTTTT 60.252 55.000 0.00 0.00 0.00 2.27
152 153 1.384191 GGGGTGAGCATGGGTCTTT 59.616 57.895 0.00 0.00 0.00 2.52
153 154 1.217057 ATGGGGTGAGCATGGGTCTT 61.217 55.000 0.00 0.00 0.00 3.01
154 155 1.620589 ATGGGGTGAGCATGGGTCT 60.621 57.895 0.00 0.00 0.00 3.85
155 156 1.454479 CATGGGGTGAGCATGGGTC 60.454 63.158 0.00 0.00 0.00 4.46
156 157 1.508667 TTCATGGGGTGAGCATGGGT 61.509 55.000 0.00 0.00 38.29 4.51
157 158 0.324552 TTTCATGGGGTGAGCATGGG 60.325 55.000 0.00 0.00 38.29 4.00
158 159 1.784358 ATTTCATGGGGTGAGCATGG 58.216 50.000 0.00 0.00 38.29 3.66
159 160 2.223641 CGAATTTCATGGGGTGAGCATG 60.224 50.000 0.00 0.00 38.29 4.06
160 161 2.026641 CGAATTTCATGGGGTGAGCAT 58.973 47.619 0.00 0.00 38.29 3.79
161 162 1.462616 CGAATTTCATGGGGTGAGCA 58.537 50.000 0.00 0.00 38.29 4.26
162 163 0.101219 GCGAATTTCATGGGGTGAGC 59.899 55.000 0.00 0.00 38.29 4.26
163 164 0.378257 CGCGAATTTCATGGGGTGAG 59.622 55.000 0.00 0.00 38.29 3.51
164 165 1.029408 CCGCGAATTTCATGGGGTGA 61.029 55.000 8.23 0.00 34.25 4.02
165 166 1.433064 CCGCGAATTTCATGGGGTG 59.567 57.895 8.23 0.00 0.00 4.61
166 167 1.752694 CCCGCGAATTTCATGGGGT 60.753 57.895 8.23 0.00 36.16 4.95
167 168 3.119193 CCCGCGAATTTCATGGGG 58.881 61.111 8.23 8.09 36.16 4.96
168 169 2.489275 CCCCCGCGAATTTCATGGG 61.489 63.158 8.23 6.78 39.69 4.00
169 170 1.447317 CTCCCCCGCGAATTTCATGG 61.447 60.000 8.23 0.00 0.00 3.66
170 171 2.024918 CTCCCCCGCGAATTTCATG 58.975 57.895 8.23 0.00 0.00 3.07
171 172 1.823899 GCTCCCCCGCGAATTTCAT 60.824 57.895 8.23 0.00 0.00 2.57
172 173 2.437716 GCTCCCCCGCGAATTTCA 60.438 61.111 8.23 0.00 0.00 2.69
173 174 1.384222 ATTGCTCCCCCGCGAATTTC 61.384 55.000 8.23 0.00 0.00 2.17
174 175 1.379843 ATTGCTCCCCCGCGAATTT 60.380 52.632 8.23 0.00 0.00 1.82
175 176 1.823899 GATTGCTCCCCCGCGAATT 60.824 57.895 8.23 0.00 0.00 2.17
176 177 2.203209 GATTGCTCCCCCGCGAAT 60.203 61.111 8.23 0.00 0.00 3.34
177 178 3.680620 CTGATTGCTCCCCCGCGAA 62.681 63.158 8.23 0.00 0.00 4.70
178 179 4.161295 CTGATTGCTCCCCCGCGA 62.161 66.667 8.23 0.00 0.00 5.87
179 180 4.473520 ACTGATTGCTCCCCCGCG 62.474 66.667 0.00 0.00 0.00 6.46
180 181 1.686325 TAGACTGATTGCTCCCCCGC 61.686 60.000 0.00 0.00 0.00 6.13
181 182 1.051812 ATAGACTGATTGCTCCCCCG 58.948 55.000 0.00 0.00 0.00 5.73
182 183 2.569404 CCTATAGACTGATTGCTCCCCC 59.431 54.545 0.00 0.00 0.00 5.40
183 184 3.511477 TCCTATAGACTGATTGCTCCCC 58.489 50.000 0.00 0.00 0.00 4.81
184 185 4.835615 TCTTCCTATAGACTGATTGCTCCC 59.164 45.833 0.00 0.00 0.00 4.30
185 186 5.772672 TCTCTTCCTATAGACTGATTGCTCC 59.227 44.000 0.00 0.00 0.00 4.70
186 187 6.892658 TCTCTTCCTATAGACTGATTGCTC 57.107 41.667 0.00 0.00 0.00 4.26
187 188 6.838612 ACTTCTCTTCCTATAGACTGATTGCT 59.161 38.462 0.00 0.00 0.00 3.91
188 189 7.049799 ACTTCTCTTCCTATAGACTGATTGC 57.950 40.000 0.00 0.00 0.00 3.56
191 192 9.875708 ACATAACTTCTCTTCCTATAGACTGAT 57.124 33.333 0.00 0.00 0.00 2.90
194 195 9.292195 GCTACATAACTTCTCTTCCTATAGACT 57.708 37.037 0.00 0.00 0.00 3.24
195 196 9.069082 TGCTACATAACTTCTCTTCCTATAGAC 57.931 37.037 0.00 0.00 0.00 2.59
196 197 9.815306 ATGCTACATAACTTCTCTTCCTATAGA 57.185 33.333 0.00 0.00 0.00 1.98
200 201 8.639761 GGTAATGCTACATAACTTCTCTTCCTA 58.360 37.037 0.00 0.00 0.00 2.94
201 202 7.345914 AGGTAATGCTACATAACTTCTCTTCCT 59.654 37.037 0.00 0.00 0.00 3.36
202 203 7.501844 AGGTAATGCTACATAACTTCTCTTCC 58.498 38.462 0.00 0.00 0.00 3.46
205 206 9.422681 TCTTAGGTAATGCTACATAACTTCTCT 57.577 33.333 0.00 0.00 32.41 3.10
206 207 9.685828 CTCTTAGGTAATGCTACATAACTTCTC 57.314 37.037 0.00 0.00 32.41 2.87
207 208 9.203163 ACTCTTAGGTAATGCTACATAACTTCT 57.797 33.333 0.00 0.00 32.41 2.85
208 209 9.819267 AACTCTTAGGTAATGCTACATAACTTC 57.181 33.333 0.00 0.00 32.41 3.01
211 212 9.178427 CGTAACTCTTAGGTAATGCTACATAAC 57.822 37.037 0.00 0.00 32.41 1.89
212 213 8.355169 CCGTAACTCTTAGGTAATGCTACATAA 58.645 37.037 0.00 0.00 34.16 1.90
213 214 7.720957 TCCGTAACTCTTAGGTAATGCTACATA 59.279 37.037 0.00 0.00 0.00 2.29
214 215 6.548622 TCCGTAACTCTTAGGTAATGCTACAT 59.451 38.462 0.00 0.00 0.00 2.29
215 216 5.887598 TCCGTAACTCTTAGGTAATGCTACA 59.112 40.000 0.00 0.00 0.00 2.74
216 217 6.382869 TCCGTAACTCTTAGGTAATGCTAC 57.617 41.667 0.00 0.00 0.00 3.58
217 218 5.533903 CCTCCGTAACTCTTAGGTAATGCTA 59.466 44.000 0.00 0.00 0.00 3.49
218 219 4.341520 CCTCCGTAACTCTTAGGTAATGCT 59.658 45.833 0.00 0.00 0.00 3.79
219 220 4.099113 ACCTCCGTAACTCTTAGGTAATGC 59.901 45.833 0.00 0.00 38.78 3.56
220 221 5.126707 ACACCTCCGTAACTCTTAGGTAATG 59.873 44.000 0.00 0.00 38.51 1.90
221 222 5.267587 ACACCTCCGTAACTCTTAGGTAAT 58.732 41.667 0.00 0.00 38.51 1.89
222 223 4.666512 ACACCTCCGTAACTCTTAGGTAA 58.333 43.478 0.00 0.00 38.51 2.85
223 224 4.307032 ACACCTCCGTAACTCTTAGGTA 57.693 45.455 0.00 0.00 38.51 3.08
224 225 3.166560 ACACCTCCGTAACTCTTAGGT 57.833 47.619 0.00 0.00 41.24 3.08
225 226 4.991472 GTTACACCTCCGTAACTCTTAGG 58.009 47.826 6.70 0.00 45.08 2.69
251 252 0.536460 GGGTGAGGCCGAGACAAAAA 60.536 55.000 0.00 0.00 38.44 1.94
252 253 1.072505 GGGTGAGGCCGAGACAAAA 59.927 57.895 0.00 0.00 38.44 2.44
253 254 2.747686 GGGTGAGGCCGAGACAAA 59.252 61.111 0.00 0.00 38.44 2.83
254 255 3.319198 GGGGTGAGGCCGAGACAA 61.319 66.667 0.00 0.00 38.44 3.18
257 258 4.332543 AAGGGGGTGAGGCCGAGA 62.333 66.667 0.00 0.00 38.44 4.04
258 259 4.101448 CAAGGGGGTGAGGCCGAG 62.101 72.222 0.00 0.00 38.44 4.63
259 260 4.649705 TCAAGGGGGTGAGGCCGA 62.650 66.667 0.00 0.00 38.44 5.54
260 261 3.204467 TTTCAAGGGGGTGAGGCCG 62.204 63.158 0.00 0.00 38.44 6.13
261 262 1.304464 CTTTCAAGGGGGTGAGGCC 60.304 63.158 0.00 0.00 0.00 5.19
262 263 1.304464 CCTTTCAAGGGGGTGAGGC 60.304 63.158 0.00 0.00 42.66 4.70
271 272 2.424956 GTCTAGCATTGCCCTTTCAAGG 59.575 50.000 4.70 0.00 46.06 3.61
272 273 2.424956 GGTCTAGCATTGCCCTTTCAAG 59.575 50.000 4.70 0.00 0.00 3.02
273 274 2.041620 AGGTCTAGCATTGCCCTTTCAA 59.958 45.455 4.70 0.00 0.00 2.69
274 275 1.635487 AGGTCTAGCATTGCCCTTTCA 59.365 47.619 4.70 0.00 0.00 2.69
275 276 2.426842 AGGTCTAGCATTGCCCTTTC 57.573 50.000 4.70 0.00 0.00 2.62
276 277 3.267031 ACTTAGGTCTAGCATTGCCCTTT 59.733 43.478 4.70 0.00 0.00 3.11
277 278 2.846827 ACTTAGGTCTAGCATTGCCCTT 59.153 45.455 4.70 0.00 0.00 3.95
278 279 2.482494 ACTTAGGTCTAGCATTGCCCT 58.518 47.619 4.70 7.20 0.00 5.19
279 280 4.381411 CTTACTTAGGTCTAGCATTGCCC 58.619 47.826 4.70 0.00 0.00 5.36
280 281 4.381411 CCTTACTTAGGTCTAGCATTGCC 58.619 47.826 4.70 0.00 39.39 4.52
293 294 9.636965 GTAAAACACGTAACAAACCTTACTTAG 57.363 33.333 0.00 0.00 0.00 2.18
294 295 8.324567 CGTAAAACACGTAACAAACCTTACTTA 58.675 33.333 0.00 0.00 45.82 2.24
295 296 7.179410 CGTAAAACACGTAACAAACCTTACTT 58.821 34.615 0.00 0.00 45.82 2.24
296 297 6.704819 CGTAAAACACGTAACAAACCTTACT 58.295 36.000 0.00 0.00 45.82 2.24
297 298 6.935055 CGTAAAACACGTAACAAACCTTAC 57.065 37.500 0.00 0.00 45.82 2.34
313 314 8.563289 TTTCCATGATGTTGTTTACGTAAAAC 57.437 30.769 21.67 17.09 46.46 2.43
314 315 9.582431 TTTTTCCATGATGTTGTTTACGTAAAA 57.418 25.926 21.67 7.43 0.00 1.52
315 316 9.239002 CTTTTTCCATGATGTTGTTTACGTAAA 57.761 29.630 16.59 16.59 0.00 2.01
316 317 8.622157 TCTTTTTCCATGATGTTGTTTACGTAA 58.378 29.630 3.29 3.29 0.00 3.18
317 318 8.155821 TCTTTTTCCATGATGTTGTTTACGTA 57.844 30.769 0.00 0.00 0.00 3.57
318 319 7.033530 TCTTTTTCCATGATGTTGTTTACGT 57.966 32.000 0.00 0.00 0.00 3.57
319 320 8.519492 AATCTTTTTCCATGATGTTGTTTACG 57.481 30.769 0.00 0.00 0.00 3.18
323 324 9.439500 CCAATAATCTTTTTCCATGATGTTGTT 57.561 29.630 0.00 0.00 0.00 2.83
324 325 8.814931 TCCAATAATCTTTTTCCATGATGTTGT 58.185 29.630 0.00 0.00 0.00 3.32
325 326 9.826574 ATCCAATAATCTTTTTCCATGATGTTG 57.173 29.630 0.00 0.00 0.00 3.33
327 328 8.355169 CGATCCAATAATCTTTTTCCATGATGT 58.645 33.333 0.00 0.00 0.00 3.06
328 329 7.811236 CCGATCCAATAATCTTTTTCCATGATG 59.189 37.037 0.00 0.00 0.00 3.07
329 330 7.506938 ACCGATCCAATAATCTTTTTCCATGAT 59.493 33.333 0.00 0.00 0.00 2.45
330 331 6.833416 ACCGATCCAATAATCTTTTTCCATGA 59.167 34.615 0.00 0.00 0.00 3.07
331 332 7.042797 ACCGATCCAATAATCTTTTTCCATG 57.957 36.000 0.00 0.00 0.00 3.66
332 333 8.760980 TTACCGATCCAATAATCTTTTTCCAT 57.239 30.769 0.00 0.00 0.00 3.41
333 334 7.284489 CCTTACCGATCCAATAATCTTTTTCCA 59.716 37.037 0.00 0.00 0.00 3.53
334 335 7.255486 CCCTTACCGATCCAATAATCTTTTTCC 60.255 40.741 0.00 0.00 0.00 3.13
335 336 7.255486 CCCCTTACCGATCCAATAATCTTTTTC 60.255 40.741 0.00 0.00 0.00 2.29
336 337 6.549736 CCCCTTACCGATCCAATAATCTTTTT 59.450 38.462 0.00 0.00 0.00 1.94
337 338 6.068670 CCCCTTACCGATCCAATAATCTTTT 58.931 40.000 0.00 0.00 0.00 2.27
338 339 5.457633 CCCCCTTACCGATCCAATAATCTTT 60.458 44.000 0.00 0.00 0.00 2.52
339 340 4.042934 CCCCCTTACCGATCCAATAATCTT 59.957 45.833 0.00 0.00 0.00 2.40
340 341 3.587506 CCCCCTTACCGATCCAATAATCT 59.412 47.826 0.00 0.00 0.00 2.40
341 342 3.585732 TCCCCCTTACCGATCCAATAATC 59.414 47.826 0.00 0.00 0.00 1.75
342 343 3.604787 TCCCCCTTACCGATCCAATAAT 58.395 45.455 0.00 0.00 0.00 1.28
343 344 3.063340 TCCCCCTTACCGATCCAATAA 57.937 47.619 0.00 0.00 0.00 1.40
344 345 2.799282 TCCCCCTTACCGATCCAATA 57.201 50.000 0.00 0.00 0.00 1.90
345 346 1.774856 CTTCCCCCTTACCGATCCAAT 59.225 52.381 0.00 0.00 0.00 3.16
346 347 1.209621 CTTCCCCCTTACCGATCCAA 58.790 55.000 0.00 0.00 0.00 3.53
347 348 0.693092 CCTTCCCCCTTACCGATCCA 60.693 60.000 0.00 0.00 0.00 3.41
348 349 1.416480 CCCTTCCCCCTTACCGATCC 61.416 65.000 0.00 0.00 0.00 3.36
349 350 1.416480 CCCCTTCCCCCTTACCGATC 61.416 65.000 0.00 0.00 0.00 3.69
350 351 1.385489 CCCCTTCCCCCTTACCGAT 60.385 63.158 0.00 0.00 0.00 4.18
351 352 2.041596 CCCCTTCCCCCTTACCGA 59.958 66.667 0.00 0.00 0.00 4.69
352 353 2.041596 TCCCCTTCCCCCTTACCG 59.958 66.667 0.00 0.00 0.00 4.02
353 354 2.005266 GGTCCCCTTCCCCCTTACC 61.005 68.421 0.00 0.00 0.00 2.85
354 355 1.230050 TGGTCCCCTTCCCCCTTAC 60.230 63.158 0.00 0.00 0.00 2.34
355 356 1.230050 GTGGTCCCCTTCCCCCTTA 60.230 63.158 0.00 0.00 0.00 2.69
356 357 2.534533 GTGGTCCCCTTCCCCCTT 60.535 66.667 0.00 0.00 0.00 3.95
357 358 4.695791 GGTGGTCCCCTTCCCCCT 62.696 72.222 0.00 0.00 0.00 4.79
367 368 1.918868 GATTTTGACGCGGGTGGTCC 61.919 60.000 10.96 0.00 33.46 4.46
368 369 1.231958 TGATTTTGACGCGGGTGGTC 61.232 55.000 10.96 0.00 34.99 4.02
369 370 1.228003 TGATTTTGACGCGGGTGGT 60.228 52.632 10.96 0.00 0.00 4.16
370 371 1.501741 CTGATTTTGACGCGGGTGG 59.498 57.895 10.96 0.00 0.00 4.61
371 372 1.154225 GCTGATTTTGACGCGGGTG 60.154 57.895 10.96 0.00 0.00 4.61
372 373 2.677003 CGCTGATTTTGACGCGGGT 61.677 57.895 12.47 4.12 41.72 5.28
373 374 2.098298 CGCTGATTTTGACGCGGG 59.902 61.111 12.47 0.00 41.72 6.13
375 376 2.098298 CCCGCTGATTTTGACGCG 59.902 61.111 3.53 3.53 44.69 6.01
376 377 2.485122 CCCCGCTGATTTTGACGC 59.515 61.111 0.00 0.00 0.00 5.19
377 378 1.861542 TTGCCCCGCTGATTTTGACG 61.862 55.000 0.00 0.00 0.00 4.35
378 379 0.109132 CTTGCCCCGCTGATTTTGAC 60.109 55.000 0.00 0.00 0.00 3.18
379 380 0.251121 TCTTGCCCCGCTGATTTTGA 60.251 50.000 0.00 0.00 0.00 2.69
380 381 0.171903 CTCTTGCCCCGCTGATTTTG 59.828 55.000 0.00 0.00 0.00 2.44
381 382 0.967380 CCTCTTGCCCCGCTGATTTT 60.967 55.000 0.00 0.00 0.00 1.82
382 383 1.379044 CCTCTTGCCCCGCTGATTT 60.379 57.895 0.00 0.00 0.00 2.17
383 384 2.273449 CCTCTTGCCCCGCTGATT 59.727 61.111 0.00 0.00 0.00 2.57
384 385 4.496336 GCCTCTTGCCCCGCTGAT 62.496 66.667 0.00 0.00 0.00 2.90
386 387 2.615227 ATAAGCCTCTTGCCCCGCTG 62.615 60.000 0.00 0.00 42.71 5.18
387 388 1.054406 TATAAGCCTCTTGCCCCGCT 61.054 55.000 0.00 0.00 42.71 5.52
388 389 0.603975 CTATAAGCCTCTTGCCCCGC 60.604 60.000 0.00 0.00 42.71 6.13
389 390 0.759346 ACTATAAGCCTCTTGCCCCG 59.241 55.000 0.00 0.00 42.71 5.73
390 391 2.952310 CAAACTATAAGCCTCTTGCCCC 59.048 50.000 0.00 0.00 42.71 5.80
391 392 3.886123 TCAAACTATAAGCCTCTTGCCC 58.114 45.455 0.00 0.00 42.71 5.36
392 393 5.897377 TTTCAAACTATAAGCCTCTTGCC 57.103 39.130 0.00 0.00 42.71 4.52
393 394 8.763049 AATTTTTCAAACTATAAGCCTCTTGC 57.237 30.769 0.00 0.00 41.71 4.01
396 397 9.227777 ACGTAATTTTTCAAACTATAAGCCTCT 57.772 29.630 0.00 0.00 0.00 3.69
399 400 9.712359 CCTACGTAATTTTTCAAACTATAAGCC 57.288 33.333 0.00 0.00 0.00 4.35
405 406 8.702438 CGAAGACCTACGTAATTTTTCAAACTA 58.298 33.333 0.00 0.00 0.00 2.24
406 407 7.225341 ACGAAGACCTACGTAATTTTTCAAACT 59.775 33.333 0.00 0.00 40.92 2.66
407 408 7.347448 ACGAAGACCTACGTAATTTTTCAAAC 58.653 34.615 0.00 0.00 40.92 2.93
408 409 7.481275 ACGAAGACCTACGTAATTTTTCAAA 57.519 32.000 0.00 0.00 40.92 2.69
409 410 7.148755 GCTACGAAGACCTACGTAATTTTTCAA 60.149 37.037 0.00 0.00 42.77 2.69
410 411 6.308766 GCTACGAAGACCTACGTAATTTTTCA 59.691 38.462 0.00 0.00 42.77 2.69
411 412 6.237675 GGCTACGAAGACCTACGTAATTTTTC 60.238 42.308 0.00 0.00 42.77 2.29
412 413 5.578336 GGCTACGAAGACCTACGTAATTTTT 59.422 40.000 0.00 0.00 42.77 1.94
413 414 5.105063 GGCTACGAAGACCTACGTAATTTT 58.895 41.667 0.00 0.00 42.77 1.82
414 415 4.158394 TGGCTACGAAGACCTACGTAATTT 59.842 41.667 0.00 0.00 42.77 1.82
415 416 3.696051 TGGCTACGAAGACCTACGTAATT 59.304 43.478 0.00 0.00 42.77 1.40
416 417 3.065925 GTGGCTACGAAGACCTACGTAAT 59.934 47.826 0.00 0.00 42.77 1.89
417 418 2.420022 GTGGCTACGAAGACCTACGTAA 59.580 50.000 0.00 0.00 42.77 3.18
418 419 2.009774 GTGGCTACGAAGACCTACGTA 58.990 52.381 0.00 0.00 42.61 3.57
419 420 0.807496 GTGGCTACGAAGACCTACGT 59.193 55.000 0.00 0.00 44.72 3.57
420 421 0.100146 GGTGGCTACGAAGACCTACG 59.900 60.000 0.00 0.00 0.00 3.51
421 422 1.134560 CAGGTGGCTACGAAGACCTAC 59.865 57.143 0.00 0.00 36.65 3.18
422 423 1.005097 TCAGGTGGCTACGAAGACCTA 59.995 52.381 0.00 0.00 36.65 3.08
423 424 0.251653 TCAGGTGGCTACGAAGACCT 60.252 55.000 0.00 0.00 39.52 3.85
424 425 0.824759 ATCAGGTGGCTACGAAGACC 59.175 55.000 0.00 0.00 0.00 3.85
425 426 2.034812 CCTATCAGGTGGCTACGAAGAC 59.965 54.545 0.00 0.00 0.00 3.01
426 427 2.307768 CCTATCAGGTGGCTACGAAGA 58.692 52.381 0.00 0.00 0.00 2.87
427 428 2.802787 CCTATCAGGTGGCTACGAAG 57.197 55.000 0.00 0.00 0.00 3.79
439 440 5.453057 GCCAGATATATCCTGCACCTATCAG 60.453 48.000 15.60 0.00 0.00 2.90
440 441 4.406972 GCCAGATATATCCTGCACCTATCA 59.593 45.833 15.60 0.00 0.00 2.15
441 442 4.202305 GGCCAGATATATCCTGCACCTATC 60.202 50.000 19.88 4.22 0.00 2.08
442 443 3.713764 GGCCAGATATATCCTGCACCTAT 59.286 47.826 19.88 0.00 0.00 2.57
443 444 3.107601 GGCCAGATATATCCTGCACCTA 58.892 50.000 19.88 0.00 0.00 3.08
444 445 1.912043 GGCCAGATATATCCTGCACCT 59.088 52.381 19.88 0.00 0.00 4.00
445 446 1.630369 TGGCCAGATATATCCTGCACC 59.370 52.381 19.88 15.18 0.00 5.01
446 447 3.199508 AGATGGCCAGATATATCCTGCAC 59.800 47.826 13.05 12.57 0.00 4.57
447 448 3.199289 CAGATGGCCAGATATATCCTGCA 59.801 47.826 13.05 10.48 0.00 4.41
448 449 3.806380 CAGATGGCCAGATATATCCTGC 58.194 50.000 13.05 11.52 0.00 4.85
449 450 3.806380 GCAGATGGCCAGATATATCCTG 58.194 50.000 13.05 8.87 36.11 3.86
480 481 2.124695 GCCTCGGGCTTTGGTAGG 60.125 66.667 7.58 0.00 46.69 3.18
511 512 1.591183 CAAAAACCAGGCCCGATGG 59.409 57.895 7.96 7.96 43.87 3.51
512 513 1.591183 CCAAAAACCAGGCCCGATG 59.409 57.895 0.00 0.00 0.00 3.84
513 514 1.609210 CCCAAAAACCAGGCCCGAT 60.609 57.895 0.00 0.00 0.00 4.18
514 515 2.203567 CCCAAAAACCAGGCCCGA 60.204 61.111 0.00 0.00 0.00 5.14
515 516 4.002506 GCCCAAAAACCAGGCCCG 62.003 66.667 0.00 0.00 41.00 6.13
518 519 0.608130 CTTAGGCCCAAAAACCAGGC 59.392 55.000 0.00 0.00 46.37 4.85
519 520 0.608130 GCTTAGGCCCAAAAACCAGG 59.392 55.000 0.00 0.00 0.00 4.45
532 533 3.686016 TCACTTTTTGGCTAGGCTTAGG 58.314 45.455 18.18 5.76 0.00 2.69
533 534 7.391148 TTTATCACTTTTTGGCTAGGCTTAG 57.609 36.000 18.18 11.06 0.00 2.18
534 535 6.127730 GCTTTATCACTTTTTGGCTAGGCTTA 60.128 38.462 18.18 2.64 0.00 3.09
535 536 5.336770 GCTTTATCACTTTTTGGCTAGGCTT 60.337 40.000 18.18 0.00 0.00 4.35
536 537 4.158579 GCTTTATCACTTTTTGGCTAGGCT 59.841 41.667 18.18 0.00 0.00 4.58
537 538 4.424626 GCTTTATCACTTTTTGGCTAGGC 58.575 43.478 9.85 9.85 0.00 3.93
538 539 4.142160 GGGCTTTATCACTTTTTGGCTAGG 60.142 45.833 0.00 0.00 0.00 3.02
539 540 4.438744 CGGGCTTTATCACTTTTTGGCTAG 60.439 45.833 0.00 0.00 0.00 3.42
540 541 3.442273 CGGGCTTTATCACTTTTTGGCTA 59.558 43.478 0.00 0.00 0.00 3.93
541 542 2.231235 CGGGCTTTATCACTTTTTGGCT 59.769 45.455 0.00 0.00 0.00 4.75
542 543 2.606108 CGGGCTTTATCACTTTTTGGC 58.394 47.619 0.00 0.00 0.00 4.52
543 544 2.606108 GCGGGCTTTATCACTTTTTGG 58.394 47.619 0.00 0.00 0.00 3.28
544 545 2.606108 GGCGGGCTTTATCACTTTTTG 58.394 47.619 0.00 0.00 0.00 2.44
545 546 1.201414 CGGCGGGCTTTATCACTTTTT 59.799 47.619 0.00 0.00 0.00 1.94
546 547 0.808755 CGGCGGGCTTTATCACTTTT 59.191 50.000 0.00 0.00 0.00 2.27
547 548 1.029947 CCGGCGGGCTTTATCACTTT 61.030 55.000 20.56 0.00 0.00 2.66
548 549 1.451387 CCGGCGGGCTTTATCACTT 60.451 57.895 20.56 0.00 0.00 3.16
549 550 2.189521 CCGGCGGGCTTTATCACT 59.810 61.111 20.56 0.00 0.00 3.41
550 551 2.900337 CCCGGCGGGCTTTATCAC 60.900 66.667 34.87 0.00 35.35 3.06
567 568 2.219458 GATTTACTAAAGGGCCTCGGC 58.781 52.381 6.46 0.00 41.06 5.54
568 569 3.553828 TGATTTACTAAAGGGCCTCGG 57.446 47.619 6.46 2.30 0.00 4.63
569 570 4.703897 TCATGATTTACTAAAGGGCCTCG 58.296 43.478 6.46 0.47 0.00 4.63
570 571 7.258441 GTTTTCATGATTTACTAAAGGGCCTC 58.742 38.462 6.46 0.00 0.00 4.70
571 572 6.127730 CGTTTTCATGATTTACTAAAGGGCCT 60.128 38.462 0.00 0.00 0.00 5.19
572 573 6.033966 CGTTTTCATGATTTACTAAAGGGCC 58.966 40.000 0.00 0.00 0.00 5.80
573 574 6.745907 GTCGTTTTCATGATTTACTAAAGGGC 59.254 38.462 0.00 0.00 0.00 5.19
574 575 6.959311 CGTCGTTTTCATGATTTACTAAAGGG 59.041 38.462 0.00 0.00 0.00 3.95
575 576 6.959311 CCGTCGTTTTCATGATTTACTAAAGG 59.041 38.462 0.00 0.00 0.00 3.11
576 577 6.959311 CCCGTCGTTTTCATGATTTACTAAAG 59.041 38.462 0.00 0.00 0.00 1.85
577 578 6.621164 GCCCGTCGTTTTCATGATTTACTAAA 60.621 38.462 0.00 0.00 0.00 1.85
578 579 5.163834 GCCCGTCGTTTTCATGATTTACTAA 60.164 40.000 0.00 0.00 0.00 2.24
579 580 4.330620 GCCCGTCGTTTTCATGATTTACTA 59.669 41.667 0.00 0.00 0.00 1.82
580 581 3.126343 GCCCGTCGTTTTCATGATTTACT 59.874 43.478 0.00 0.00 0.00 2.24
581 582 3.422655 GCCCGTCGTTTTCATGATTTAC 58.577 45.455 0.00 0.00 0.00 2.01
582 583 2.420722 GGCCCGTCGTTTTCATGATTTA 59.579 45.455 0.00 0.00 0.00 1.40
583 584 1.201414 GGCCCGTCGTTTTCATGATTT 59.799 47.619 0.00 0.00 0.00 2.17
584 585 0.808755 GGCCCGTCGTTTTCATGATT 59.191 50.000 0.00 0.00 0.00 2.57
585 586 0.035439 AGGCCCGTCGTTTTCATGAT 60.035 50.000 0.00 0.00 0.00 2.45
586 587 0.953471 CAGGCCCGTCGTTTTCATGA 60.953 55.000 0.00 0.00 0.00 3.07
587 588 0.953471 TCAGGCCCGTCGTTTTCATG 60.953 55.000 0.00 0.00 0.00 3.07
588 589 0.673644 CTCAGGCCCGTCGTTTTCAT 60.674 55.000 0.00 0.00 0.00 2.57
589 590 1.301401 CTCAGGCCCGTCGTTTTCA 60.301 57.895 0.00 0.00 0.00 2.69
590 591 2.677979 GCTCAGGCCCGTCGTTTTC 61.678 63.158 0.00 0.00 0.00 2.29
591 592 2.668550 GCTCAGGCCCGTCGTTTT 60.669 61.111 0.00 0.00 0.00 2.43
602 603 4.785453 GTCGGGCTTGGGCTCAGG 62.785 72.222 0.00 0.00 39.29 3.86
603 604 4.785453 GGTCGGGCTTGGGCTCAG 62.785 72.222 0.00 0.00 39.29 3.35
625 626 1.943340 GCCTAGATTTTGAGCCCGAAG 59.057 52.381 0.00 0.00 0.00 3.79
626 627 1.408266 GGCCTAGATTTTGAGCCCGAA 60.408 52.381 0.00 0.00 37.66 4.30
627 628 0.180406 GGCCTAGATTTTGAGCCCGA 59.820 55.000 0.00 0.00 37.66 5.14
628 629 2.707902 GGCCTAGATTTTGAGCCCG 58.292 57.895 0.00 0.00 37.66 6.13
630 631 1.685148 CTGGGCCTAGATTTTGAGCC 58.315 55.000 11.42 0.00 43.09 4.70
631 632 1.685148 CCTGGGCCTAGATTTTGAGC 58.315 55.000 19.36 0.00 0.00 4.26
632 633 1.685148 GCCTGGGCCTAGATTTTGAG 58.315 55.000 19.36 0.00 34.56 3.02
633 634 3.903208 GCCTGGGCCTAGATTTTGA 57.097 52.632 19.36 0.00 34.56 2.69
652 653 4.889112 ATGCTGCATCCGGGCCTG 62.889 66.667 9.81 3.88 0.00 4.85
653 654 4.133373 AATGCTGCATCCGGGCCT 62.133 61.111 16.55 0.00 0.00 5.19
654 655 3.908081 CAATGCTGCATCCGGGCC 61.908 66.667 16.55 0.00 0.00 5.80
655 656 3.908081 CCAATGCTGCATCCGGGC 61.908 66.667 16.55 0.00 0.00 6.13
656 657 3.221389 CCCAATGCTGCATCCGGG 61.221 66.667 26.50 26.50 32.58 5.73
657 658 2.440796 ACCCAATGCTGCATCCGG 60.441 61.111 16.55 18.94 0.00 5.14
658 659 2.827051 CGACCCAATGCTGCATCCG 61.827 63.158 16.55 10.10 0.00 4.18
659 660 2.484062 CCGACCCAATGCTGCATCC 61.484 63.158 16.55 2.70 0.00 3.51
660 661 2.484062 CCCGACCCAATGCTGCATC 61.484 63.158 16.55 2.66 0.00 3.91
661 662 2.440796 CCCGACCCAATGCTGCAT 60.441 61.111 9.81 9.81 0.00 3.96
664 665 1.535204 AAAAGCCCGACCCAATGCTG 61.535 55.000 0.00 0.00 33.59 4.41
665 666 0.831711 AAAAAGCCCGACCCAATGCT 60.832 50.000 0.00 0.00 35.08 3.79
666 667 0.389817 GAAAAAGCCCGACCCAATGC 60.390 55.000 0.00 0.00 0.00 3.56
667 668 0.109319 CGAAAAAGCCCGACCCAATG 60.109 55.000 0.00 0.00 0.00 2.82
668 669 1.248101 CCGAAAAAGCCCGACCCAAT 61.248 55.000 0.00 0.00 0.00 3.16
669 670 1.899534 CCGAAAAAGCCCGACCCAA 60.900 57.895 0.00 0.00 0.00 4.12
670 671 2.281900 CCGAAAAAGCCCGACCCA 60.282 61.111 0.00 0.00 0.00 4.51
671 672 3.060000 CCCGAAAAAGCCCGACCC 61.060 66.667 0.00 0.00 0.00 4.46
672 673 3.744719 GCCCGAAAAAGCCCGACC 61.745 66.667 0.00 0.00 0.00 4.79
673 674 3.744719 GGCCCGAAAAAGCCCGAC 61.745 66.667 0.00 0.00 43.76 4.79
677 678 2.257371 GAACGGCCCGAAAAAGCC 59.743 61.111 11.71 0.00 46.17 4.35
678 679 2.127003 CGAACGGCCCGAAAAAGC 60.127 61.111 11.71 0.00 0.00 3.51
679 680 2.559330 CCGAACGGCCCGAAAAAG 59.441 61.111 11.71 0.00 0.00 2.27
680 681 2.979120 CCCGAACGGCCCGAAAAA 60.979 61.111 11.71 0.00 0.00 1.94
705 706 2.423446 CTAGTCCTCGCCATGGGC 59.577 66.667 15.13 4.92 46.75 5.36
706 707 1.330655 ACACTAGTCCTCGCCATGGG 61.331 60.000 15.13 3.69 0.00 4.00
707 708 1.338337 CTACACTAGTCCTCGCCATGG 59.662 57.143 7.63 7.63 0.00 3.66
708 709 1.338337 CCTACACTAGTCCTCGCCATG 59.662 57.143 0.00 0.00 0.00 3.66
709 710 1.214673 TCCTACACTAGTCCTCGCCAT 59.785 52.381 0.00 0.00 0.00 4.40
710 711 0.622136 TCCTACACTAGTCCTCGCCA 59.378 55.000 0.00 0.00 0.00 5.69
711 712 1.984066 ATCCTACACTAGTCCTCGCC 58.016 55.000 0.00 0.00 0.00 5.54
712 713 5.005094 AGATAATCCTACACTAGTCCTCGC 58.995 45.833 0.00 0.00 0.00 5.03
713 714 5.644636 GGAGATAATCCTACACTAGTCCTCG 59.355 48.000 0.00 0.00 45.64 4.63
737 738 1.771255 CCCTACCCCTGAATCTCAAGG 59.229 57.143 0.00 0.00 0.00 3.61
738 739 2.703007 CTCCCTACCCCTGAATCTCAAG 59.297 54.545 0.00 0.00 0.00 3.02
739 740 2.317900 TCTCCCTACCCCTGAATCTCAA 59.682 50.000 0.00 0.00 0.00 3.02
740 741 1.937350 TCTCCCTACCCCTGAATCTCA 59.063 52.381 0.00 0.00 0.00 3.27
741 742 2.178106 TCTCTCCCTACCCCTGAATCTC 59.822 54.545 0.00 0.00 0.00 2.75
742 743 2.227703 TCTCTCCCTACCCCTGAATCT 58.772 52.381 0.00 0.00 0.00 2.40
743 744 2.777459 TCTCTCCCTACCCCTGAATC 57.223 55.000 0.00 0.00 0.00 2.52
744 745 3.592865 GAATCTCTCCCTACCCCTGAAT 58.407 50.000 0.00 0.00 0.00 2.57
745 746 2.690026 CGAATCTCTCCCTACCCCTGAA 60.690 54.545 0.00 0.00 0.00 3.02
746 747 1.133450 CGAATCTCTCCCTACCCCTGA 60.133 57.143 0.00 0.00 0.00 3.86
747 748 1.333177 CGAATCTCTCCCTACCCCTG 58.667 60.000 0.00 0.00 0.00 4.45
748 749 0.935194 ACGAATCTCTCCCTACCCCT 59.065 55.000 0.00 0.00 0.00 4.79
749 750 2.516906 CTACGAATCTCTCCCTACCCC 58.483 57.143 0.00 0.00 0.00 4.95
750 751 2.158490 ACCTACGAATCTCTCCCTACCC 60.158 54.545 0.00 0.00 0.00 3.69
751 752 2.885894 CACCTACGAATCTCTCCCTACC 59.114 54.545 0.00 0.00 0.00 3.18
752 753 3.553904 ACACCTACGAATCTCTCCCTAC 58.446 50.000 0.00 0.00 0.00 3.18
753 754 3.947612 ACACCTACGAATCTCTCCCTA 57.052 47.619 0.00 0.00 0.00 3.53
754 755 2.830651 ACACCTACGAATCTCTCCCT 57.169 50.000 0.00 0.00 0.00 4.20
755 756 2.885894 CCTACACCTACGAATCTCTCCC 59.114 54.545 0.00 0.00 0.00 4.30
756 757 3.315749 CACCTACACCTACGAATCTCTCC 59.684 52.174 0.00 0.00 0.00 3.71
757 758 3.946558 ACACCTACACCTACGAATCTCTC 59.053 47.826 0.00 0.00 0.00 3.20
758 759 3.965694 ACACCTACACCTACGAATCTCT 58.034 45.455 0.00 0.00 0.00 3.10
759 760 5.530171 TCATACACCTACACCTACGAATCTC 59.470 44.000 0.00 0.00 0.00 2.75
760 761 5.443283 TCATACACCTACACCTACGAATCT 58.557 41.667 0.00 0.00 0.00 2.40
761 762 5.762825 TCATACACCTACACCTACGAATC 57.237 43.478 0.00 0.00 0.00 2.52
762 763 6.726490 AATCATACACCTACACCTACGAAT 57.274 37.500 0.00 0.00 0.00 3.34
763 764 7.828508 ATAATCATACACCTACACCTACGAA 57.171 36.000 0.00 0.00 0.00 3.85
764 765 8.159447 ACTATAATCATACACCTACACCTACGA 58.841 37.037 0.00 0.00 0.00 3.43
765 766 8.332996 ACTATAATCATACACCTACACCTACG 57.667 38.462 0.00 0.00 0.00 3.51
768 769 7.931948 GCAAACTATAATCATACACCTACACCT 59.068 37.037 0.00 0.00 0.00 4.00
769 770 7.713507 TGCAAACTATAATCATACACCTACACC 59.286 37.037 0.00 0.00 0.00 4.16
770 771 8.657074 TGCAAACTATAATCATACACCTACAC 57.343 34.615 0.00 0.00 0.00 2.90
794 795 0.317603 GCTGCCTGCTCGCAAATATG 60.318 55.000 0.03 0.00 38.56 1.78
795 796 0.749091 TGCTGCCTGCTCGCAAATAT 60.749 50.000 0.00 0.00 43.37 1.28
796 797 1.371337 CTGCTGCCTGCTCGCAAATA 61.371 55.000 0.00 0.00 43.37 1.40
797 798 2.674033 TGCTGCCTGCTCGCAAAT 60.674 55.556 0.00 0.00 43.37 2.32
798 799 3.359523 CTGCTGCCTGCTCGCAAA 61.360 61.111 0.00 0.00 43.37 3.68
799 800 4.631247 ACTGCTGCCTGCTCGCAA 62.631 61.111 0.00 0.00 43.37 4.85
801 802 4.756458 AGACTGCTGCCTGCTCGC 62.756 66.667 0.00 0.00 43.37 5.03
802 803 1.633852 GAAAGACTGCTGCCTGCTCG 61.634 60.000 0.00 0.00 43.37 5.03
803 804 1.633852 CGAAAGACTGCTGCCTGCTC 61.634 60.000 0.00 0.00 43.37 4.26
821 822 5.699097 TGTGGATTCTTTCCCTAAAAACG 57.301 39.130 0.00 0.00 44.77 3.60
824 825 9.320295 ACAATAATGTGGATTCTTTCCCTAAAA 57.680 29.630 0.00 0.00 44.77 1.52
828 829 5.590259 CGACAATAATGTGGATTCTTTCCCT 59.410 40.000 0.00 0.00 44.77 4.20
830 831 6.436843 ACGACAATAATGTGGATTCTTTCC 57.563 37.500 0.00 0.00 45.69 3.13
843 844 2.866156 CGATGCACTGGACGACAATAAT 59.134 45.455 0.00 0.00 0.00 1.28
850 851 1.144969 GAAAACGATGCACTGGACGA 58.855 50.000 0.00 0.00 0.00 4.20
851 852 0.165944 GGAAAACGATGCACTGGACG 59.834 55.000 0.00 0.00 0.00 4.79
852 853 0.521735 GGGAAAACGATGCACTGGAC 59.478 55.000 0.00 0.00 0.00 4.02
853 854 0.400213 AGGGAAAACGATGCACTGGA 59.600 50.000 0.00 0.00 0.00 3.86
869 870 7.084486 CGAGGATTAGTCAAAAAGAAAAAGGG 58.916 38.462 0.00 0.00 0.00 3.95
871 872 7.113544 GCACGAGGATTAGTCAAAAAGAAAAAG 59.886 37.037 0.00 0.00 0.00 2.27
872 873 6.915843 GCACGAGGATTAGTCAAAAAGAAAAA 59.084 34.615 0.00 0.00 0.00 1.94
873 874 6.038825 TGCACGAGGATTAGTCAAAAAGAAAA 59.961 34.615 0.00 0.00 0.00 2.29
874 875 5.529430 TGCACGAGGATTAGTCAAAAAGAAA 59.471 36.000 0.00 0.00 0.00 2.52
875 876 5.049680 GTGCACGAGGATTAGTCAAAAAGAA 60.050 40.000 0.00 0.00 0.00 2.52
876 877 4.451096 GTGCACGAGGATTAGTCAAAAAGA 59.549 41.667 0.00 0.00 0.00 2.52
877 878 4.378459 GGTGCACGAGGATTAGTCAAAAAG 60.378 45.833 11.45 0.00 0.00 2.27
878 879 3.500680 GGTGCACGAGGATTAGTCAAAAA 59.499 43.478 11.45 0.00 0.00 1.94
879 880 3.071479 GGTGCACGAGGATTAGTCAAAA 58.929 45.455 11.45 0.00 0.00 2.44
880 881 2.037902 TGGTGCACGAGGATTAGTCAAA 59.962 45.455 11.45 0.00 0.00 2.69
881 882 1.621317 TGGTGCACGAGGATTAGTCAA 59.379 47.619 11.45 0.00 0.00 3.18
882 883 1.262417 TGGTGCACGAGGATTAGTCA 58.738 50.000 11.45 0.00 0.00 3.41
888 889 0.606401 CTTGGTTGGTGCACGAGGAT 60.606 55.000 11.45 0.00 0.00 3.24
927 942 1.376683 GGCGGCACTGGACAATGTA 60.377 57.895 3.07 0.00 0.00 2.29
1025 1057 1.152567 AGGAGGAGGGAGATGAGCG 60.153 63.158 0.00 0.00 0.00 5.03
1061 1093 1.118838 GCTCTCCTCACAGGTGCTAT 58.881 55.000 0.00 0.00 36.53 2.97
1276 1308 2.738521 CACCGTGGAGTTGCCGAG 60.739 66.667 0.00 0.00 40.66 4.63
1508 2912 2.265739 GCTCATCGTGCAGGTGGA 59.734 61.111 6.26 4.65 0.00 4.02
1867 3271 4.755123 TCCGTGAGAAGAAATTGGAAACTC 59.245 41.667 0.00 0.00 0.00 3.01
1870 3274 4.456535 TGTCCGTGAGAAGAAATTGGAAA 58.543 39.130 0.00 0.00 0.00 3.13
1893 3297 7.510549 TTGGAGTAAATATGCAGCCTATTTC 57.489 36.000 16.39 10.11 32.51 2.17
1912 3329 3.550233 TCTCTCGTTGAGACGTTTTGGAG 60.550 47.826 6.76 0.00 46.03 3.86
1946 3370 1.472552 GCTGCCGGAAAACAAAACCTT 60.473 47.619 5.05 0.00 0.00 3.50
1962 3386 3.121030 CACCGGTGCTACAGCTGC 61.121 66.667 24.02 0.00 42.66 5.25
1980 3404 3.736252 GCCAACATACATAGCACGAGTAG 59.264 47.826 0.00 0.00 0.00 2.57
2066 3490 3.936453 ACGATAAATAACGCACATGTGGT 59.064 39.130 26.55 18.91 0.00 4.16
2075 3499 5.006358 ACAATCAGTGGACGATAAATAACGC 59.994 40.000 0.00 0.00 0.00 4.84
2181 3606 2.901042 GACCCGGCTCCTAGTTGG 59.099 66.667 0.00 0.00 37.10 3.77
2185 3610 3.905678 CAGCGACCCGGCTCCTAG 61.906 72.222 0.00 0.00 42.53 3.02
2199 3624 1.726853 AGATGTAACAGCGAACCAGC 58.273 50.000 0.00 0.00 37.41 4.85
2200 3625 4.688879 TGTAAAGATGTAACAGCGAACCAG 59.311 41.667 0.00 0.00 0.00 4.00
2203 3628 5.350365 TCCATGTAAAGATGTAACAGCGAAC 59.650 40.000 0.00 0.00 0.00 3.95
2233 3662 4.096382 GGTCAAGCGGTGAATATGATTTGT 59.904 41.667 0.00 0.00 38.23 2.83
2239 3668 1.331756 GCAGGTCAAGCGGTGAATATG 59.668 52.381 0.00 0.00 38.23 1.78
2240 3669 1.668419 GCAGGTCAAGCGGTGAATAT 58.332 50.000 0.00 0.00 38.23 1.28
2247 3676 0.318120 AAAAATGGCAGGTCAAGCGG 59.682 50.000 0.00 0.00 0.00 5.52
2337 3766 1.951181 GCGTTGCGTACTCATGCGAA 61.951 55.000 12.44 0.00 39.74 4.70
2340 3769 1.225745 GTGCGTTGCGTACTCATGC 60.226 57.895 2.74 4.21 39.22 4.06
2366 3795 2.260869 GGCCAGCAGCTGACGAAAA 61.261 57.895 24.90 0.00 43.05 2.29
2373 3802 1.079405 CAAAATGGGCCAGCAGCTG 60.079 57.895 16.23 16.23 43.05 4.24
2377 3806 1.003349 CCAAATCAAAATGGGCCAGCA 59.997 47.619 13.78 0.00 32.87 4.41
2378 3807 1.741528 CCAAATCAAAATGGGCCAGC 58.258 50.000 13.78 0.00 32.87 4.85
2404 3833 1.159285 CCGAACTGCAAGCATCTTGA 58.841 50.000 10.44 0.00 37.60 3.02
2441 3870 9.289782 TGAAAAAGAAAAATGAAAACCCAAAGA 57.710 25.926 0.00 0.00 0.00 2.52
2474 3903 5.990386 TCATGAATGTGTGAAAAATGTTGGG 59.010 36.000 0.00 0.00 0.00 4.12
2475 3904 7.225145 AGTTCATGAATGTGTGAAAAATGTTGG 59.775 33.333 12.12 0.00 36.23 3.77
2476 3905 8.133754 AGTTCATGAATGTGTGAAAAATGTTG 57.866 30.769 12.12 0.00 36.23 3.33
2477 3906 8.199449 AGAGTTCATGAATGTGTGAAAAATGTT 58.801 29.630 12.12 0.00 36.23 2.71
2478 3907 7.719483 AGAGTTCATGAATGTGTGAAAAATGT 58.281 30.769 12.12 0.00 36.23 2.71
2522 3953 8.967218 CAATTTAAGAAGATCACGCTTTTGAAA 58.033 29.630 0.00 0.00 0.00 2.69
2532 3963 7.454260 AGGTTCACCAATTTAAGAAGATCAC 57.546 36.000 0.00 0.00 38.89 3.06
2585 4018 8.760735 TCATCCATATGAAAACATTTGTGGATT 58.239 29.630 3.65 5.68 41.82 3.01
2586 4019 8.308851 TCATCCATATGAAAACATTTGTGGAT 57.691 30.769 3.65 0.00 43.86 3.41
2587 4020 7.715266 TCATCCATATGAAAACATTTGTGGA 57.285 32.000 3.65 0.00 39.20 4.02
2603 4036 6.127507 TGCGGATTTGAAAATGTTCATCCATA 60.128 34.615 15.57 4.12 43.29 2.74
2619 4052 2.159854 GGCGAAAAATGTTGCGGATTTG 60.160 45.455 0.00 0.00 36.18 2.32
2804 4239 7.065563 CCATTTGATTGTTGACTTGTGGAAAAA 59.934 33.333 0.00 0.00 0.00 1.94
2807 4242 5.128499 ACCATTTGATTGTTGACTTGTGGAA 59.872 36.000 0.00 0.00 0.00 3.53
2810 4245 5.590145 TCACCATTTGATTGTTGACTTGTG 58.410 37.500 0.00 0.00 0.00 3.33
2811 4246 5.850557 TCACCATTTGATTGTTGACTTGT 57.149 34.783 0.00 0.00 0.00 3.16
2812 4247 5.173673 CGTTCACCATTTGATTGTTGACTTG 59.826 40.000 0.00 0.00 32.84 3.16
2825 4260 2.060050 TGGTTGACCGTTCACCATTT 57.940 45.000 1.22 0.00 39.43 2.32
2830 4265 1.535462 CTGGATTGGTTGACCGTTCAC 59.465 52.381 0.00 0.00 39.43 3.18
2836 4271 2.489938 TACTGCTGGATTGGTTGACC 57.510 50.000 0.00 0.00 0.00 4.02
2842 4277 2.614057 GACCGATTTACTGCTGGATTGG 59.386 50.000 0.00 2.67 0.00 3.16
2847 4282 1.737793 GGTTGACCGATTTACTGCTGG 59.262 52.381 0.00 0.00 0.00 4.85
2850 4285 2.415512 GACAGGTTGACCGATTTACTGC 59.584 50.000 0.00 0.00 42.08 4.40
2855 4290 2.879103 ATGGACAGGTTGACCGATTT 57.121 45.000 0.00 0.00 42.08 2.17
2858 4293 2.167693 GACATATGGACAGGTTGACCGA 59.832 50.000 7.80 0.00 42.08 4.69
2866 4301 0.032130 CGGGTCGACATATGGACAGG 59.968 60.000 18.91 0.00 35.37 4.00
2867 4302 0.744874 ACGGGTCGACATATGGACAG 59.255 55.000 18.91 1.08 35.37 3.51
2873 4308 1.359117 CGCTGACGGGTCGACATAT 59.641 57.895 18.91 0.52 31.07 1.78
2874 4309 2.795973 CGCTGACGGGTCGACATA 59.204 61.111 18.91 0.00 31.07 2.29
2884 4319 3.701604 GACTAGTGGGCCGCTGACG 62.702 68.421 29.35 18.52 39.67 4.35
2885 4320 2.167398 TTGACTAGTGGGCCGCTGAC 62.167 60.000 29.35 18.86 0.00 3.51
2886 4321 1.911269 TTGACTAGTGGGCCGCTGA 60.911 57.895 29.35 12.27 0.00 4.26
2887 4322 1.741770 GTTGACTAGTGGGCCGCTG 60.742 63.158 29.35 20.04 0.00 5.18
2893 4328 3.243907 GCTATGCCTAGTTGACTAGTGGG 60.244 52.174 15.07 4.51 43.34 4.61
2898 4333 3.181465 GCCAAGCTATGCCTAGTTGACTA 60.181 47.826 10.58 0.00 0.00 2.59
2899 4334 2.420687 GCCAAGCTATGCCTAGTTGACT 60.421 50.000 10.58 0.00 0.00 3.41
2906 4341 2.828868 CCGGCCAAGCTATGCCTA 59.171 61.111 20.57 0.00 45.71 3.93
2907 4342 4.883354 GCCGGCCAAGCTATGCCT 62.883 66.667 18.11 0.00 45.71 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.